Pregenerated sensors for ACAD8 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031969Ensembl transcript IDs: ENSMUST00000060513.8, ENSMUST00000120367.8, ENSMUST00000128923.8, ENSMUST00000132293.2, ENSMUST00000215693.2
Found 167 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR TCA 90 bp | AGCTGTGCAGCCTTCCGCATCACATCCACAGGGAACAGCTCCTTCTaGTCCCACTCCGCCATATTGGGAGCCATTTCCCGAGCTGCAAAG | + |
Preference number: 1 (lower is better) Translates to: SCAAFRITSTGNSSF*SHSAILGAISRAAK Trigger: CTTTGCAGCTCGGGAAATGGCTCCCAATATGGCGGAGTGGGATCAGAAGGAGCTGTTCCCTGTGGATGTGATGCGGAAGGCTGCACAGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000128923.8 ENSMUST00000132293.2 |
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3UTR GCA 90 bp | GCCACAGCTTTGACCGCTTGTCTTTCCAGAATGAGGAAGGCAGTGTaGAGGTCTTCTTTGGGCATGGCTCCTCAGAGCAGCCCTTCTAGC | + |
Preference number: 1 (lower is better) Translates to: ATALTACLSRMRKAV*RSSLGMAPQSSPSS Trigger: GCTAGAAGGGCTGCTCTGAGGAGCCATGCCCAAAGAAGACCTGCACACTGCCTTCCTCATTCTGGAAAGACAAGCGGTCAAAGCTGTGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060513.8 ENSMUST00000120367.8 |
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3UTR GCA 90 bp | TTGATCCTTCCACCATTCAGTCCTTTCATGGCGATGAGAAAACCCTaGCCCTCGGTCCCAATCCTGTTGGCCACAGGGACAGCACAGTCT | + |
Preference number: 1 (lower is better) Translates to: LILPPFSPFMAMRKP*PSVPILLATGTAQS Trigger: AGACTGTGCTGTCCCTGTGGCCAACAGGATTGGGACCGAGGGGCAGGGTTTTCTCATCGCCATGAAAGGACTGAATGGTGGAAGGATCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215693.2 |
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3UTR TCA 90 bp | TTTGGCGCCAGACTCACCAGTTCGGCACATGACCACATAGATGTCTaGCTCACCTCCCCCACTGATGAAGGCCTTGGAACCATTGAGGAT | + |
Preference number: 1 (lower is better) Translates to: FGARLTSSAHDHIDV*LTSPTDEGLGTIED Trigger: ATCCTCAATGGTTCCAAGGCCTTCATCAGTGGGGGAGGTGAGTCAGACATCTATGTGGTCATGTGCCGAACTGGTGAGTCTGGCGCCAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000128923.8 ENSMUST00000132293.2 ENSMUST00000215693.2 |
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3UTR CCA 90 bp | TCACATCCACAGGGAACAGCTCCTTCTGATCCCACTCCGCCATATTaGGAGCCATTTCCCGAGCTGCAAAGTCAAAGGCCACTTTCTGAA | + |
Preference number: 1 (lower is better) Translates to: SHPQGTAPSDPTPPY*EPFPELQSQRPLSE Trigger: TTCAGAAAGTGGCCTTTGACTTTGCAGCTCGGGAAATGGCTCCCAATATGGCGGAGTGGGATCAGAAGGAGCTGTTCCCTGTGGATGTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000128923.8 ENSMUST00000132293.2 |
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3UTR TCA 90 bp | TTGGCTGCGAGTTCCACCCCACCTTCTTCTCCTTCTTGCCAAAGCTaGGACCAGGGGTTCCTTTCTCAACAACTATGCAGGAGATACCTT | + |
Preference number: 1 (lower is better) Translates to: LAASSTPPSSPSCQS*DQGFLSQQLCRRYL Trigger: AAGGTATCTCCTGCATAGTTGTTGAGAAAGGAACCCCTGGTCTCAGCTTTGGCAAGAAGGAGAAGAAGGTGGGGTGGAACTCGCAGCCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000128923.8 ENSMUST00000132293.2 ENSMUST00000215693.2 |
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3UTR TCA 90 bp | TTAGAAGAGCTCAGCCCTTTGGTCTACTTCATGATTCACTTGAACTaGGCAGCCCATAGGAGCATCAAGACTGATTCCAGCTGCACACAG | + |
Preference number: 1 (lower is better) Translates to: LEELSPLVYFMIHLN*AAHRSIKTDSSCTQ Trigger: CTGTGTGCAGCTGGAATCAGTCTTGATGCTCCTATGGGCTGCTCAGTTCAAGTGAATCATGAAGTAGACCAAAGGGCTGAGCTCTTCTAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060513.8 ENSMUST00000120367.8 |
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3UTR TCA 90 bp | TCATTGCTTAGCAGTAGGTTCCCAAATATTTATTTCATCATGATCTaGGTACAGGAGTACTGTCCTGACATACCCCTAGTGCAGAACAGA | + |
Preference number: 1 (lower is better) Translates to: SLLSSRFPNIYFIMI*VQEYCPDIPLVQNR Trigger: TCTGTTCTGCACTAGGGGTATGTCAGGACAGTACTCCTGTACTCAGATCATGATGAAATAAATATTTGGGAACCTACTGCTAAGCAATGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060513.8 ENSMUST00000120367.8 |
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3UTR CAA 90 bp | CCTTTCATGGCGATGAGAAAACCCTGCCCCTCGGTCCCAATCCTGTaGGCCACAGGGACAGCACAGTCTTCAAAGATCACTGCTCGGGTT | + |
Preference number: 2 (lower is better) Translates to: PFMAMRKPCPSVPIL*ATGTAQSSKITARV Trigger: AACCCGAGCAGTGATCTTTGAAGACTGTGCTGTCCCTGTGGCCAACAGGATTGGGACCGAGGGGCAGGGTTTTCTCATCGCCATGAAAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000128923.8 ENSMUST00000215693.2 |
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3UTR-3UTR TCA 90 bp | CCTGTTGGCCACAGGGACAGCACAGTCTTCAAAGATCACTGCTCGGGTTGGCTGCCTTCTTGCCAAAGCTaGGACCAGGGGTTCCTTTCT | + |
Preference number: 2 (lower is better) Translates to: PVGHRDSTVFKDHCSGWLPSCQS*DQGFLS Trigger: AGAAAGGAACCCCTGGTCTCAGCTTTGGCAAGAAGG...CAGCCAACCCGAGCAGTGATCTTTGAAGACTGTGCTGTCCCTGTGGCCAACAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000128923.8 ENSMUST00000215693.2 |
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3UTR-3UTR GCA 90 bp | CCCTGCCCCTCGGTCCCAATCCTGTTGGCCACAGGGACAGCACAGTCTTCAAAGAGCCATTTCCCGAGCTaGAAAGTCAAAGGCCACTTT | + |
Preference number: 2 (lower is better) Translates to: PCPSVPILLATGTAQSSKSHFPS*KVKGHF Trigger: AAAGTGGCCTTTGACTTTGCAGCTCGGGAAATGGCT...CTTTGAAGACTGTGCTGTCCCTGTGGCCAACAGGATTGGGACCGAGGGGCAGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128923.8 |
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3UTR-3UTR CCA 90 bp | CTGAGCCGGGCTGACTCCATGACGAGCTGTAAGATGCCACTGCAGGAGACTATAGGTCTTCTTTGGGCATaGCTCCTCAGAGCAGCCCTT | + |
Preference number: 2 (lower is better) Translates to: LSRADSMTSCKMPLQETIGLLWA*LLRAAL Trigger: AAGGGCTGCTCTGAGGAGCCATGCCCAAAGAAGACC...TATAGTCTCCTGCAGTGGCATCTTACAGCTCGTCATGGAGTCAGCCCGGCTCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060513.8 ENSMUST00000120367.8 |
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3UTR-3UTR TCA 90 bp | AAAACCCTGCCCCTCGGTCCCAATCCTGTTGGCCACAGGGACAGCACAGTCTTCCCAAGGCTTCAAAGATaGCAGAAGTATCAAGGCGAG | + |
Preference number: 2 (lower is better) Translates to: KTLPLGPNPVGHRDSTVFPRLQR*QKYQGE Trigger: CTCGCCTTGATACTTCTGTCATCTTTGAAGCCTTGG...GAAGACTGTGCTGTCCCTGTGGCCAACAGGATTGGGACCGAGGGGCAGGGTTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000128923.8 |
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3UTR-3UTR GCA 90 bp | CTGAGCCGGGCTGACTCCATGACGAGCTGTAAGATGCCACTGCAGGAGACTATAAAGACTGATTCCAGCTaGACACAGACTCCAGGCGAG | + |
Preference number: 2 (lower is better) Translates to: LSRADSMTSCKMPLQETIKTDSS*TQTPGE Trigger: CTCGCCTGGAGTCTGTGTGCAGCTGGAATCAGTCTT...TATAGTCTCCTGCAGTGGCATCTTACAGCTCGTCATGGAGTCAGCCCGGCTCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060513.8 ENSMUST00000120367.8 |
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3UTR-3UTR CCA 90 bp | CCAGGGGTTCCTTTCTCAACAACTATGCAGGAGATACCTTTGGCGCCAGACTCATATAGGCAGTGGTGCTaGTGCAGCCTGTGGCCAAGG | + |
Preference number: 2 (lower is better) Translates to: PGVPFSTTMQEIPLAPDSYRQWC*CSLWPR Trigger: CCTTGGCCACAGGCTGCACCAGCACCACTGCCTATA...TGAGTCTGGCGCCAAAGGTATCTCCTGCATAGTTGTTGAGAAAGGAACCCCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000128923.8 ENSMUST00000132293.2 |
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3UTR CAA 90 bp | ACCGCTTGTCTTTCCAGAATGAGGAAGGCAGTGTGCAGGTCTTCTTaGGGCATGGCTCCTCAGAGCAGCCCTTCTAGCTCTGCTAAGAAC | + |
Preference number: 2 (lower is better) Translates to: TACLSRMRKAVCRSS*GMAPQSSPSSSAKN Trigger: GTTCTTAGCAGAGCTAGAAGGGCTGCTCTGAGGAGCCATGCCCAAAGAAGACCTGCACACTGCCTTCCTCATTCTGGAAAGACAAGCGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060513.8 ENSMUST00000120367.8 |
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3UTR-3UTR GCA 90 bp | AGAAAACCCTGCCCCTCGGTCCCAATCCTGTTGGCCACAGGGACAGCACAGTCTGGTGGGCAAAATTTGTaGCTCTGTTCCTCATTTCCA | + |
Preference number: 2 (lower is better) Translates to: RKPCPSVPILLATGTAQSGGQNL*LCSSFP Trigger: TGGAAATGAGGAACAGAGGCACAAATTTTGCCCACC...AGACTGTGCTGTCCCTGTGGCCAACAGGATTGGGACCGAGGGGCAGGGTTTTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000128923.8 ENSMUST00000215693.2 |
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3UTR-3UTR CCA 90 bp | GTCCCAATCCTGTTGGCCACAGGGACAGCACAGTCTTCAAAGATCACTGCTCGGCATGGTACAGAGCGGTaGGCAAAATTTGTGCCTCTG | + |
Preference number: 2 (lower is better) Translates to: VPILLATGTAQSSKITARHGTER*AKFVPL Trigger: CAGAGGCACAAATTTTGCCCACCGCTCTGTACCATG...CCGAGCAGTGATCTTTGAAGACTGTGCTGTCCCTGTGGCCAACAGGATTGGGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000128923.8 ENSMUST00000215693.2 |
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3UTR-3UTR CCA 90 bp | CTTCTCCTTCTTGCCAAAGCTGAGACCAGGGGTTCCTTTCTCAACAACTATGCATATAGGCAGTGGTGCTaGTGCAGCCTGTGGCCAAGG | + |
Preference number: 2 (lower is better) Translates to: LLLLAKAETRGSFLNNYAYRQWC*CSLWPR Trigger: CCTTGGCCACAGGCTGCACCAGCACCACTGCCTATA...TGCATAGTTGTTGAGAAAGGAACCCCTGGTCTCAGCTTTGGCAAGAAGGAGAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000128923.8 ENSMUST00000132293.2 |
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3UTR CAA 90 bp | CACCAAAATGCCCATAGTGTGGATCCAAGCCACAGCTTTGACCGCTaGTCTTTCCAGAATGAGGAAGGCAGTGTGCAGGTCTTCTTTGGG | + |
Preference number: 2 (lower is better) Translates to: HQNAHSVDPSHSFDR*SFQNEEGSVQVFFG Trigger: CCCAAAGAAGACCTGCACACTGCCTTCCTCATTCTGGAAAGACAAGCGGTCAAAGCTGTGGCTTGGATCCACACTATGGGCATTTTGGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060513.8 ENSMUST00000120367.8 |
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3UTR-3UTR GCA 90 bp | GGGGTTCCTTTCTCAACAACTATGCAGGAGATACCTTTGGCGCCAGACTCACCAAGCCATTTCCCGAGCTaGAAAGTCAAAGGCCACTTT | + |
Preference number: 2 (lower is better) Translates to: GVPFSTTMQEIPLAPDSPSHFPS*KVKGHF Trigger: AAAGTGGCCTTTGACTTTGCAGCTCGGGAAATGGCT...TGGTGAGTCTGGCGCCAAAGGTATCTCCTGCATAGTTGTTGAGAAAGGAACCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000128923.8 ENSMUST00000132293.2 |
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3UTR-3UTR GCA 90 bp | TTTCTCAACAACTATGCAGGAGATACCTTTGGCGCCAGACTCACCAGTTCGGCATCCCAGAGAGCAGGATaGAACATTGATCCTTCCACC | + |
Preference number: 2 (lower is better) Translates to: FLNNYAGDTFGARLTSSASQRAG*NIDPST Trigger: GGTGGAAGGATCAATGTTGCATCCTGCTCTCTGGGA...TGCCGAACTGGTGAGTCTGGCGCCAAAGGTATCTCCTGCATAGTTGTTGAGAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215693.2 |
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3UTR CAA 90 bp | ACAAGAATCACCAAAATGCCCATAGTGTGGATCCAAGCCACAGCTTaGACCGCTTGTCTTTCCAGAATGAGGAAGGCAGTGTGCAGGTCT | + |
Preference number: 2 (lower is better) Translates to: TRITKMPIVWIQATA*TACLSRMRKAVCRS Trigger: AGACCTGCACACTGCCTTCCTCATTCTGGAAAGACAAGCGGTCAAAGCTGTGGCTTGGATCCACACTATGGGCATTTTGGTGATTCTTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060513.8 ENSMUST00000120367.8 |
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3UTR-3UTR TCA 90 bp | CTGGCCTCCCCAGACTTTACCTGTTTAATCAGGAAAAGCTTCATTCAAGTACCCAACCAGCAGCGTGGCTaGCAGCTCAGTCTGTTTAGA | + |
Preference number: 2 (lower is better) Translates to: LASPDFTCLIRKSFIQVPNQQRG*QLSLFR Trigger: TCTAAACAGACTGAGCTGTCAGCCACGCTGCTGGTT...GGGTACTTGAATGAAGCTTTTCCTGATTAAACAGGTAAAGTCTGGGGAGGCCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060513.8 ENSMUST00000120367.8 |
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3UTR-3UTR TCA 90 bp | TTGCCAAAGCTGAGACCAGGGGTTCCTTTCTCAACAACTATGCAGGAGATACCTCACCAGTTCGGCACATaGCCACATAGATGTCTGACT | + |
Preference number: 2 (lower is better) Translates to: LPKLRPGVPFSTTMQEIPHQFGT*PHRCLT Trigger: AGTCAGACATCTATGTGGTCATGTGCCGAACTGGTG...AGGTATCTCCTGCATAGTTGTTGAGAAAGGAACCCCTGGTCTCAGCTTTGGCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000128923.8 ENSMUST00000132293.2 ENSMUST00000215693.2 |
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3UTR-3UTR CCA 90 bp | CTGGCCTCCCCAGACTTTACCTGTTTAATCAGGAAAAGCTTCATTCAAGTACCCTGTGCAGGTCTTCTTTaGGCATGGCTCCTCAGAGCA | + |
Preference number: 2 (lower is better) Translates to: LASPDFTCLIRKSFIQVPCAGLL*AWLLRA Trigger: TGCTCTGAGGAGCCATGCCCAAAGAAGACCTGCACA...GGGTACTTGAATGAAGCTTTTCCTGATTAAACAGGTAAAGTCTGGGGAGGCCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060513.8 ENSMUST00000120367.8 |
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3UTR-3UTR CCA 90 bp | TTTATTTCATGGTTCCTGGAGTTAAAGGTGCACCCTAACTCATTGCTTAGCAGTATCTGTCCACTGCCCTaGCCTCCCCAGACTTTACCT | + |
Preference number: 2 (lower is better) Translates to: FISWFLELKVHPNSLLSSICPLP*PPQTLP Trigger: AGGTAAAGTCTGGGGAGGCCAGGGCAGTGGACAGAT...ACTGCTAAGCAATGAGTTAGGGTGCACCTTTAACTCCAGGAACCATGAAATAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060513.8 ENSMUST00000120367.8 |
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3UTR-3UTR GCA 90 bp | ATACCACAAGTTGAGTGGTGTCACCAAGAAACTAAGTCAGAATGTCACAAACGTAAGACTGATTCCAGCTaGACACAGACTCCAGGCGAG | + |
Preference number: 2 (lower is better) Translates to: IPQVEWCHQETKSECHKRKTDSS*TQTPGE Trigger: CTCGCCTGGAGTCTGTGTGCAGCTGGAATCAGTCTT...ACGTTTGTGACATTCTGACTTAGTTTCTTGGTGACACCACTCAACTTGTGGTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060513.8 ENSMUST00000120367.8 |
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3UTR-3UTR CCA 90 bp | TGCTTTTGGAGAAAGCATTTGGTCACACTTCTTTATAAGACATCAGTGAGGTTGGGTCTTCTTTGGGCATaGCTCCTCAGAGCAGCCCTT | + |
Preference number: 2 (lower is better) Translates to: CFWRKHLVTLLYKTSVRLGLLWA*LLRAAL Trigger: AAGGGCTGCTCTGAGGAGCCATGCCCAAAGAAGACC...CAACCTCACTGATGTCTTATAAAGAAGTGTGACCAAATGCTTTCTCCAAAAGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060513.8 ENSMUST00000120367.8 |
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3UTR-3UTR CCA 90 bp | GCTGACTCCATGACGAGCTGTAAGATGCCACTGCAGGAGACTATACCTAATACTTTGACATTTATTTCATaGTTCCTGGAGTTAAAGGTG | + |
Preference number: 2 (lower is better) Translates to: ADSMTSCKMPLQETIPNTLTFIS*FLELKV Trigger: CACCTTTAACTCCAGGAACCATGAAATAAATGTCAA...AGTATTAGGTATAGTCTCCTGCAGTGGCATCTTACAGCTCGTCATGGAGTCAGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060513.8 ENSMUST00000120367.8 |
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3UTR TCA 72 bp | GCCTTCCGCATCACATCCACAGGGAACAGCTCCTTCTaGTCCCACTCCGCCATATTGGGAGCCATTTCCCGA | + |
Preference number: 3 (lower is better) Translates to: AFRITSTGNSSF*SHSAILGAISR Trigger: TCGGGAAATGGCTCCCAATATGGCGGAGTGGGATCAGAAGGAGCTGTTCCCTGTGGATGTGATGCGGAAGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000128923.8 ENSMUST00000132293.2 |
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3UTR GCA 72 bp | CCACCATTCAGTCCTTTCATGGCGATGAGAAAACCCTaGCCCTCGGTCCCAATCCTGTTGGCCACAGGGACA | + |
Preference number: 3 (lower is better) Translates to: PPFSPFMAMRKP*PSVPILLATGT Trigger: TGTCCCTGTGGCCAACAGGATTGGGACCGAGGGGCAGGGTTTTCTCATCGCCATGAAAGGACTGAATGGTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215693.2 |
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3UTR CCA 72 bp | CAGGGAACAGCTCCTTCTGATCCCACTCCGCCATATTaGGAGCCATTTCCCGAGCTGCAAAGTCAAAGGCCA | + |
Preference number: 3 (lower is better) Translates to: QGTAPSDPTPPY*EPFPELQSQRP Trigger: TGGCCTTTGACTTTGCAGCTCGGGAAATGGCTCCCAATATGGCGGAGTGGGATCAGAAGGAGCTGTTCCCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000128923.8 ENSMUST00000132293.2 |
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3UTR-3UTR CAA 90 bp | GAAAACCCTGCCCCTCGGTCCCAATCCTGTTGGCCACAGGGACAGCACAGTCTTAGCGGTGGGCAAAATTaGTGCCTCTGTTCCTCATTT | + |
Preference number: 3 (lower is better) Translates to: ENPAPRSQSCWPQGQHSLSGGQN*CLCSSF Trigger: AAATGAGGAACAGAGGCACAAATTTTGCCCACCGCT...AAGACTGTGCTGTCCCTGTGGCCAACAGGATTGGGACCGAGGGGCAGGGTTTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000128923.8 ENSMUST00000215693.2 |
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3UTR GCA 72 bp | ACAGCACAGTCTTCAAAGATCACTGCTCGGGTTGGCTaGGAGTTCCACCCCACCTTCTTCTCCTTCTTGCCA | + |
Preference number: 3 (lower is better) Translates to: TAQSSKITARVG*EFHPTFFSFLP Trigger: TGGCAAGAAGGAGAAGAAGGTGGGGTGGAACTCGCAGCCAACCCGAGCAGTGATCTTTGAAGACTGTGCTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000128923.8 ENSMUST00000215693.2 |
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3UTR GCA 72 bp | GCAGAACAGAAACCAGAAAGGGGCAGATCTGTCCACTaGCCTGGCCTCCCCAGACTTTACCTGTTTAATCAG | + |
Preference number: 3 (lower is better) Translates to: AEQKPERGRSVH*PGLPRLYLFNQ Trigger: CTGATTAAACAGGTAAAGTCTGGGGAGGCCAGGGCAGTGGACAGATCTGCCCCTTTCTGGTTTCTGTTCTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060513.8 ENSMUST00000120367.8 |
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3UTR CCA 72 bp | TCCAGGCACACATGTTGTGGATGCTTATATAGGCAGTaGTGCTGGTGCAGCCTGTGGCCAAGGCTTCAAAGA | + |
Preference number: 3 (lower is better) Translates to: SRHTCCGCLYRQ*CWCSLWPRLQR Trigger: TCTTTGAAGCCTTGGCCACAGGCTGCACCAGCACCACTGCCTATATAAGCATCCACAACATGTGTGCCTGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128923.8 |
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3UTR CCA 72 bp | ATCACTCCCACTGCTTGTGGATGCTTATATAGGCAGTaGTGCTGGTGCAGCCTGTGGCCAAGGCTTCAAAGA | + |
Preference number: 3 (lower is better) Translates to: ITPTACGCLYRQ*CWCSLWPRLQR Trigger: TCTTTGAAGCCTTGGCCACAGGCTGCACCAGCACCACTGCCTATATAAGCATCCACAAGCAGTGGGAGTGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132293.2 |
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3UTR-3UTR CAA 90 bp | AGGTCTTCTTTGGGCATGGCTCCTCAGAGCAGCCCTTCTAGCTCTGCTAAGAACGAAGAGCTCAGCCCTTaGGTCTACTTCATGATTCAC | + |
Preference number: 3 (lower is better) Translates to: RSSLGMAPQSSPSSSAKNEELSP*VYFMIH Trigger: GTGAATCATGAAGTAGACCAAAGGGCTGAGCTCTTC...GTTCTTAGCAGAGCTAGAAGGGCTGCTCTGAGGAGCCATGCCCAAAGAAGACCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060513.8 ENSMUST00000120367.8 |
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3UTR-3UTR CAA 90 bp | GCTAAGAACTCTGTTCTTGTCTCAGAACCAGCAGCGTGGCTGACAGCTCAGTCTGAAGAGCTCAGCCCTTaGGTCTACTTCATGATTCAC | + |
Preference number: 3 (lower is better) Translates to: AKNSVLVSEPAAWLTAQSEELSP*VYFMIH Trigger: GTGAATCATGAAGTAGACCAAAGGGCTGAGCTCTTC...AGACTGAGCTGTCAGCCACGCTGCTGGTTCTGAGACAAGAACAGAGTTCTTAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060513.8 ENSMUST00000120367.8 |
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3UTR-3UTR CAA 90 bp | TTGACCGCTTGTCTTTCCAGAATGAGGAAGGCAGTGTGCAGGTCTTCTTTGGGCCTAAGAACTCTGTTCTaGTCTCAGAACCAGCAGCGT | + |
Preference number: 3 (lower is better) Translates to: LTACLSRMRKAVCRSSLGLRTLF*SQNQQR Trigger: ACGCTGCTGGTTCTGAGACAAGAACAGAGTTCTTAG...GCCCAAAGAAGACCTGCACACTGCCTTCCTCATTCTGGAAAGACAAGCGGTCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060513.8 ENSMUST00000120367.8 |
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3UTR TCA 72 bp | AGAACTCTGTTCTTGTCTCAGAACCAGCAGCGTGGCTaGCAGCTCAGTCTGTTTAGAAGAGCTCAGCCCTTT | + |
Preference number: 3 (lower is better) Translates to: RTLFLSQNQQRG*QLSLFRRAQPF Trigger: AAAGGGCTGAGCTCTTCTAAACAGACTGAGCTGTCAGCCACGCTGCTGGTTCTGAGACAAGAACAGAGTTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060513.8 ENSMUST00000120367.8 |
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3UTR GCA 72 bp | ATCCCACTCCGCCATATTGGGAGCCATTTCCCGAGCTaGAAAGTCAAAGGCCACTTTCTGAAATCCTTTCTG | + |
Preference number: 3 (lower is better) Translates to: IPLRHIGSHFPS*KVKGHFLKSFL Trigger: CAGAAAGGATTTCAGAAAGTGGCCTTTGACTTTGCAGCTCGGGAAATGGCTCCCAATATGGCGGAGTGGGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000128923.8 ENSMUST00000132293.2 |
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3UTR TCA 72 bp | CTCAGCCCTTTGGTCTACTTCATGATTCACTTGAACTaGGCAGCCCATAGGAGCATCAAGACTGATTCCAGC | + |
Preference number: 3 (lower is better) Translates to: LSPLVYFMIHLN*AAHRSIKTDSS Trigger: GCTGGAATCAGTCTTGATGCTCCTATGGGCTGCTCAGTTCAAGTGAATCATGAAGTAGACCAAAGGGCTGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060513.8 ENSMUST00000120367.8 |
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3UTR-3UTR CAA 90 bp | ATACCACAAGTTGAGTGGTGTCACCAAGAAACTAAGTCAGAATGTCACAAACGTGTGTGCAGGTCTTCTTaGGGCATGGCTCCTCAGAGC | + |
Preference number: 3 (lower is better) Translates to: IPQVEWCHQETKSECHKRVCRSS*GMAPQS Trigger: GCTCTGAGGAGCCATGCCCAAAGAAGACCTGCACAC...ACGTTTGTGACATTCTGACTTAGTTTCTTGGTGACACCACTCAACTTGTGGTAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060513.8 ENSMUST00000120367.8 |
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3UTR-3UTR CAA 90 bp | GCTGACTCCATGACGAGCTGTAAGATGCCACTGCAGGAGACTATACCTAATACTCACAGCTTTGACCGCTaGTCTTTCCAGAATGAGGAA | + |
Preference number: 3 (lower is better) Translates to: ADSMTSCKMPLQETIPNTHSFDR*SFQNEE Trigger: TTCCTCATTCTGGAAAGACAAGCGGTCAAAGCTGTG...AGTATTAGGTATAGTCTCCTGCAGTGGCATCTTACAGCTCGTCATGGAGTCAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060513.8 ENSMUST00000120367.8 |
||
3UTR-3UTR CAA 90 bp | CTGGCCTCCCCAGACTTTACCTGTTTAATCAGGAAAAGCTTCATTCAAGTACCCCACAGCTTTGACCGCTaGTCTTTCCAGAATGAGGAA | + |
Preference number: 3 (lower is better) Translates to: LASPDFTCLIRKSFIQVPHSFDR*SFQNEE Trigger: TTCCTCATTCTGGAAAGACAAGCGGTCAAAGCTGTG...GGGTACTTGAATGAAGCTTTTCCTGATTAAACAGGTAAAGTCTGGGGAGGCCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000060513.8 ENSMUST00000120367.8 |
||
3UTR TCA 72 bp | ACCATTGAGGATGTAATGATCTCCTTGTTGTTTAGCTaGGGTCAGAAGAGATGCAGCATCACTCCCACTGCC | + |
Preference number: 3 (lower is better) Translates to: TIEDVMISLLFS*GQKRCSITPTA Trigger: GGCAGTGGGAGTGATGCTGCATCTCTTCTGACCTCAGCTAAACAACAAGGAGATCATTACATCCTCAATGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000128923.8 ENSMUST00000215693.2 |
||
3UTR CCA 72 bp | GCAGTAGGAAGCAAACTTCTCCATGGTACAGAGCGGTaGGCAAAATTTGTGCCTCTGTTCCTCATTTCCAAA | + |
Preference number: 3 (lower is better) Translates to: AVGSKLLHGTER*AKFVPLFLISK Trigger: TTTGGAAATGAGGAACAGAGGCACAAATTTTGCCCACCGCTCTGTACCATGGAGAAGTTTGCTTCCTACTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000128923.8 ENSMUST00000215693.2 |
||
3UTR TCA 72 bp | ACCATTGAGGATGTAATGATCTCCTTGTTGTTTAGCTaGGGTCAGAAGAGATGCAGCATCACTCCCACTGCT | + |
Preference number: 3 (lower is better) Translates to: TIEDVMISLLFS*GQKRCSITPTA Trigger: AGCAGTGGGAGTGATGCTGCATCTCTTCTGACCTCAGCTAAACAACAAGGAGATCATTACATCCTCAATGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132293.2 |
||
3UTR TCA 72 bp | TTATTTCATCATGATCTGAGTACAGGAGTACTGTCCTaGCATACCCCTAGTGCAGAACAGAAACCAGAAAGG | + |
Preference number: 3 (lower is better) Translates to: LFHHDLSTGVLS*HTPSAEQKPER Trigger: CCTTTCTGGTTTCTGTTCTGCACTAGGGGTATGTCAGGACAGTACTCCTGTACTCAGATCATGATGAAATAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060513.8 ENSMUST00000120367.8 |
||
3UTR-3UTR CAA 90 bp | TGCTTTTGGAGAAAGCATTTGGTCACACTTCTTTATAAGACATCAGTGAGGTTGCTAAGAACTCTGTTCTaGTCTCAGAACCAGCAGCGT | + |
Preference number: 3 (lower is better) Translates to: CFWRKHLVTLLYKTSVRLLRTLF*SQNQQR Trigger: ACGCTGCTGGTTCTGAGACAAGAACAGAGTTCTTAG...CAACCTCACTGATGTCTTATAAAGAAGTGTGACCAAATGCTTTCTCCAAAAGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060513.8 ENSMUST00000120367.8 |
||
3UTR TCA 72 bp | AGCAGTAGGTTCCCAAATATTTATTTCATCATGATCTaGGTACAGGAGTACTGTCCTGACATACCCCTAGTG | + |
Preference number: 3 (lower is better) Translates to: SSRFPNIYFIMI*VQEYCPDIPLV Trigger: CACTAGGGGTATGTCAGGACAGTACTCCTGTACTCAGATCATGATGAAATAAATATTTGGGAACCTACTGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060513.8 ENSMUST00000120367.8 |
||
3UTR TCA 72 bp | TGCTTAGCAGTAGGTTCCCAAATATTTATTTCATCATaGTCTGAGTACAGGAGTACTGTCCTGACATACCCC | + |
Preference number: 3 (lower is better) Translates to: CLAVGSQIFISS*SEYRSTVLTYP Trigger: GGGGTATGTCAGGACAGTACTCCTGTACTCAGATCATGATGAAATAAATATTTGGGAACCTACTGCTAAGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060513.8 ENSMUST00000120367.8 |
||
3UTR CCA 72 bp | AGCTCAGAATACCGTAACAAAATACCACAAGTTGAGTaGTGTCACCAAGAAACTAAGTCAGAATGTCACAAA | + |
Preference number: 3 (lower is better) Translates to: SSEYRNKIPQVE*CHQETKSECHK Trigger: TTTGTGACATTCTGACTTAGTTTCTTGGTGACACCACTCAACTTGTGGTATTTTGTTACGGTATTCTGAGCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060513.8 ENSMUST00000120367.8 |
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CDS-3UTR CCA 90 bp | CTGAGCCGGGCTGACTCCATGACGAGCTGTAAGATGCCACTGCAGGAGACTATAGATCACTGCTCGGGTTaGCTGCGAGTTCCACCCCAC | + |
Preference number: 4 (lower is better) Translates to: LSRADSMTSCKMPLQETIDHCSG*LRVPPH Trigger: GTGGGGTGGAACTCGCAGCCAACCCGAGCAGTGATC...TATAGTCTCCTGCAGTGGCATCTTACAGCTCGTCATGGAGTCAGCCCGGCTCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060513.8 ENSMUST00000120367.8 |
||
CDS-3UTR GCA 90 bp | GCTAAGAACTCTGTTCTTGTCTCAGAACCAGCAGCGTGGCTGACAGCTCAGTCTACTGCTCGGGTTGGCTaGGAGTTCCACCCCACCTTC | + |
Preference number: 4 (lower is better) Translates to: AKNSVLVSEPAAWLTAQSTARVG*EFHPTF Trigger: GAAGGTGGGGTGGAACTCGCAGCCAACCCGAGCAGT...AGACTGAGCTGTCAGCCACGCTGCTGGTTCTGAGACAAGAACAGAGTTCTTAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060513.8 ENSMUST00000120367.8 |
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CDS-3UTR GCA 90 bp | CTGAGCCGGGCTGACTCCATGACGAGCTGTAAGATGCCACTGCAGGAGACTATACTGCAAAGCCACTGCTaGAGTACGGATCATCAGCCG | + |
Preference number: 4 (lower is better) Translates to: LSRADSMTSCKMPLQETILQSHC*STDHQP Trigger: CGGCTGATGATCCGTACTGCAGCAGTGGCTTTGCAG...TATAGTCTCCTGCAGTGGCATCTTACAGCTCGTCATGGAGTCAGCCCGGCTCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060513.8 ENSMUST00000120367.8 |
||
CDS-3UTR CCA 90 bp | GATCTGTCCACTGCCCTGGCCTCCCCAGACTTTACCTGTTTAATCAGGAAAAGCGATCACTGCTCGGGTTaGCTGCGAGTTCCACCCCAC | + |
Preference number: 4 (lower is better) Translates to: DLSTALASPDFTCLIRKSDHCSG*LRVPPH Trigger: GTGGGGTGGAACTCGCAGCCAACCCGAGCAGTGATC...GCTTTTCCTGATTAAACAGGTAAAGTCTGGGGAGGCCAGGGCAGTGGACAGATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000060513.8 ENSMUST00000120367.8 |
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CDS-3UTR CCA 90 bp | CCCATAGGAGCATCAAGACTGATTCCAGCTGCACACAGACTCCAGGCGAGGCTCGGATCTGGTGGACCCTaGAGTCCCGCATATACTGTT | + |
Preference number: 4 (lower is better) Translates to: PIGASRLIPAAHRLQARLGSGGP*SPAYTV Trigger: AACAGTATATGCGGGACTCCAGGGTCCACCAGATCC...GAGCCTCGCCTGGAGTCTGTGTGCAGCTGGAATCAGTCTTGATGCTCCTATGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060513.8 ENSMUST00000120367.8 |
||
3UTR CAA 72 bp | GCGATGAGAAAACCCTGCCCCTCGGTCCCAATCCTGTaGGCCACAGGGACAGCACAGTCTTCAAAGATCACT | + |
Preference number: 4 (lower is better) Translates to: AMRKPCPSVPIL*ATGTAQSSKIT Trigger: AGTGATCTTTGAAGACTGTGCTGTCCCTGTGGCCAACAGGATTGGGACCGAGGGGCAGGGTTTTCTCATCGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000128923.8 ENSMUST00000215693.2 |
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CDS-3UTR GCA 90 bp | GAAAACCCTGCCCCTCGGTCCCAATCCTGTTGGCCACAGGGACAGCACAGTCTTAGCCATTTCCCGAGCTaGAAAGTCAAAGGCCACTTT | + |
Preference number: 4 (lower is better) Translates to: ENPAPRSQSCWPQGQHSLSHFPS*KVKGHF Trigger: AAAGTGGCCTTTGACTTTGCAGCTCGGGAAATGGCT...AAGACTGTGCTGTCCCTGTGGCCAACAGGATTGGGACCGAGGGGCAGGGTTTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215693.2 |
||
CDS-3UTR GCA 90 bp | GCTAAGAACTCTGTTCTTGTCTCAGAACCAGCAGCGTGGCTGACAGCTCAGTCTGCGATGAGAAAACCCTaGCCCTCGGTCCCAATCCTG | + |
Preference number: 4 (lower is better) Translates to: AKNSVLVSEPAAWLTAQSAMRKP*PSVPIL Trigger: CAGGATTGGGACCGAGGGGCAGGGTTTTCTCATCGC...AGACTGAGCTGTCAGCCACGCTGCTGGTTCTGAGACAAGAACAGAGTTCTTAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060513.8 ENSMUST00000120367.8 |
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CDS-3UTR CCA 90 bp | TTGACCGCTTGTCTTTCCAGAATGAGGAAGGCAGTGTGCAGGTCTTCTTTGGGCTATAGGCAGTGGTGCTaGTGCAGCCTGTGGCCAAGG | + |
Preference number: 4 (lower is better) Translates to: LTACLSRMRKAVCRSSLGYRQWC*CSLWPR Trigger: CCTTGGCCACAGGCTGCACCAGCACCACTGCCTATA...GCCCAAAGAAGACCTGCACACTGCCTTCCTCATTCTGGAAAGACAAGCGGTCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060513.8 ENSMUST00000120367.8 |
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CDS-3UTR CCA 90 bp | CTGAGCCGGGCTGACTCCATGACGAGCTGTAAGATGCCACTGCAGGAGACTATATGCTTATATAGGCAGTaGTGCTGGTGCAGCCTGTGG | + |
Preference number: 4 (lower is better) Translates to: LSRADSMTSCKMPLQETICLYRQ*CWCSLW Trigger: CCACAGGCTGCACCAGCACCACTGCCTATATAAGCA...TATAGTCTCCTGCAGTGGCATCTTACAGCTCGTCATGGAGTCAGCCCGGCTCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060513.8 ENSMUST00000120367.8 |
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CDS-3UTR CCA 90 bp | GATCTGTCCACTGCCCTGGCCTCCCCAGACTTTACCTGTTTAATCAGGAAAAGCCGGTCCCAATCCTGTTaGCCACAGGGACAGCACAGT | + |
Preference number: 4 (lower is better) Translates to: DLSTALASPDFTCLIRKSRSQSC*PQGQHS Trigger: ACTGTGCTGTCCCTGTGGCCAACAGGATTGGGACCG...GCTTTTCCTGATTAAACAGGTAAAGTCTGGGGAGGCCAGGGCAGTGGACAGATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060513.8 ENSMUST00000120367.8 |
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CDS-3UTR CCA 90 bp | CTGAGCCGGGCTGACTCCATGACGAGCTGTAAGATGCCACTGCAGGAGACTATACAAAGAGCTTGGCCATaGAACACAGGGCCACTGCAT | + |
Preference number: 4 (lower is better) Translates to: LSRADSMTSCKMPLQETIQRAWP*NTGPLH Trigger: ATGCAGTGGCCCTGTGTTCCATGGCCAAGCTCTTTG...TATAGTCTCCTGCAGTGGCATCTTACAGCTCGTCATGGAGTCAGCCCGGCTCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060513.8 ENSMUST00000120367.8 |
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3UTR CAA 72 bp | CTTTCCAGAATGAGGAAGGCAGTGTGCAGGTCTTCTTaGGGCATGGCTCCTCAGAGCAGCCCTTCTAGCTCT | + |
Preference number: 4 (lower is better) Translates to: LSRMRKAVCRSS*GMAPQSSPSSS Trigger: AGAGCTAGAAGGGCTGCTCTGAGGAGCCATGCCCAAAGAAGACCTGCACACTGCCTTCCTCATTCTGGAAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060513.8 ENSMUST00000120367.8 |
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3UTR CAA 72 bp | GCCCATAGTGTGGATCCAAGCCACAGCTTTGACCGCTaGTCTTTCCAGAATGAGGAAGGCAGTGTGCAGGTC | + |
Preference number: 4 (lower is better) Translates to: AHSVDPSHSFDR*SFQNEEGSVQV Trigger: GACCTGCACACTGCCTTCCTCATTCTGGAAAGACAAGCGGTCAAAGCTGTGGCTTGGATCCACACTATGGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060513.8 ENSMUST00000120367.8 |
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CDS-3UTR TCA 90 bp | CCCATAGGAGCATCAAGACTGATTCCAGCTGCACACAGACTCCAGGCGAGGCTCCCAAGGCTTCAAAGATaGCAGAAGTATCAAGGCGAG | + |
Preference number: 4 (lower is better) Translates to: PIGASRLIPAAHRLQARLPRLQR*QKYQGE Trigger: CTCGCCTTGATACTTCTGTCATCTTTGAAGCCTTGG...GAGCCTCGCCTGGAGTCTGTGTGCAGCTGGAATCAGTCTTGATGCTCCTATGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060513.8 ENSMUST00000120367.8 |
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CDS-3UTR TCA 90 bp | CTGAGCCGGGCTGACTCCATGACGAGCTGTAAGATGCCACTGCAGGAGACTATACACCAGTTCGGCACATaGCCACATAGATGTCTGACT | + |
Preference number: 4 (lower is better) Translates to: LSRADSMTSCKMPLQETIHQFGT*PHRCLT Trigger: AGTCAGACATCTATGTGGTCATGTGCCGAACTGGTG...TATAGTCTCCTGCAGTGGCATCTTACAGCTCGTCATGGAGTCAGCCCGGCTCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060513.8 ENSMUST00000120367.8 |
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CDS-3UTR GCA 90 bp | GCTGACTCCATGACGAGCTGTAAGATGCCACTGCAGGAGACTATACCTAATACTACTGCTCGGGTTGGCTaGGAGTTCCACCCCACCTTC | + |
Preference number: 4 (lower is better) Translates to: ADSMTSCKMPLQETIPNTTARVG*EFHPTF Trigger: GAAGGTGGGGTGGAACTCGCAGCCAACCCGAGCAGT...AGTATTAGGTATAGTCTCCTGCAGTGGCATCTTACAGCTCGTCATGGAGTCAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060513.8 ENSMUST00000120367.8 |
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CDS-3UTR GCA 90 bp | CCCATAGGAGCATCAAGACTGATTCCAGCTGCACACAGACTCCAGGCGAGGCTCCTTGGTGGCCATATCTaGCAACTGGAATTGGAGGTA | + |
Preference number: 4 (lower is better) Translates to: PIGASRLIPAAHRLQARLLGGHI*QLELEV Trigger: TACCTCCAATTCCAGTTGGCAGATATGGCCACCAAG...GAGCCTCGCCTGGAGTCTGTGTGCAGCTGGAATCAGTCTTGATGCTCCTATGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060513.8 ENSMUST00000120367.8 |
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CDS-3UTR GCA 90 bp | AGGTCTTCTTTGGGCATGGCTCCTCAGAGCAGCCCTTCTAGCTCTGCTAAGAACTCTTCCCGCTCTTCCTaGAAAGCCACTGCTGCAGTA | + |
Preference number: 4 (lower is better) Translates to: RSSLGMAPQSSPSSSAKNSSRSS*KATAAV Trigger: TACTGCAGCAGTGGCTTTGCAGGAAGAGCGGGAAGA...GTTCTTAGCAGAGCTAGAAGGGCTGCTCTGAGGAGCCATGCCCAAAGAAGACCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060513.8 ENSMUST00000120367.8 |
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CDS-3UTR CCA 90 bp | CCCATAGGAGCATCAAGACTGATTCCAGCTGCACACAGACTCCAGGCGAGGCTCAAGCAAACTTCTCCATaGTACAGAGCGGTGGGCAAA | + |
Preference number: 4 (lower is better) Translates to: PIGASRLIPAAHRLQARLKQTSP*YRAVGK Trigger: TTTGCCCACCGCTCTGTACCATGGAGAAGTTTGCTT...GAGCCTCGCCTGGAGTCTGTGTGCAGCTGGAATCAGTCTTGATGCTCCTATGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060513.8 ENSMUST00000120367.8 |
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CDS-3UTR CCA 90 bp | TTGACCGCTTGTCTTTCCAGAATGAGGAAGGCAGTGTGCAGGTCTTCTTTGGGCCCTTCTAGGATCTGGTaGACCCTGGAGTCCCGCATA | + |
Preference number: 4 (lower is better) Translates to: LTACLSRMRKAVCRSSLGPSRIW*TLESRI Trigger: TATGCGGGACTCCAGGGTCCACCAGATCCTAGAAGG...GCCCAAAGAAGACCTGCACACTGCCTTCCTCATTCTGGAAAGACAAGCGGTCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060513.8 ENSMUST00000120367.8 |
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3UTR CAA 72 bp | GGGGTTCCTTTCTCAACAACTATGCAGGAGATACCTTaGGCGCCAGACTCACCAGTTCGGCACATGACCACA | + |
Preference number: 4 (lower is better) Translates to: GVPFSTTMQEIP*APDSPVRHMTT Trigger: TGTGGTCATGTGCCGAACTGGTGAGTCTGGCGCCAAAGGTATCTCCTGCATAGTTGTTGAGAAAGGAACCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000128923.8 ENSMUST00000132293.2 ENSMUST00000215693.2 |
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CDS-3UTR TCA 90 bp | GATCTGTCCACTGCCCTGGCCTCCCCAGACTTTACCTGTTTAATCAGGAAAAGCGACCACATAGATGTCTaGCTCACCTCCCCCACTGAT | + |
Preference number: 4 (lower is better) Translates to: DLSTALASPDFTCLIRKSDHIDV*LTSPTD Trigger: ATCAGTGGGGGAGGTGAGTCAGACATCTATGTGGTC...GCTTTTCCTGATTAAACAGGTAAAGTCTGGGGAGGCCAGGGCAGTGGACAGATC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000060513.8 ENSMUST00000120367.8 |
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CDS-3UTR TCA 90 bp | TTGACCGCTTGTCTTTCCAGAATGAGGAAGGCAGTGTGCAGGTCTTCTTTGGGCCCTTCTTGCCAAAGCTaGGACCAGGGGTTCCTTTCT | + |
Preference number: 4 (lower is better) Translates to: LTACLSRMRKAVCRSSLGPSCQS*DQGFLS Trigger: AGAAAGGAACCCCTGGTCTCAGCTTTGGCAAGAAGG...GCCCAAAGAAGACCTGCACACTGCCTTCCTCATTCTGGAAAGACAAGCGGTCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060513.8 ENSMUST00000120367.8 |
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CDS-3UTR TCA 90 bp | GACCAGGGGTTCCTTTCTCAACAACTATGCAGGAGATACCTTTGGCGCCAGACTGCCCCAAGGAAGCTGTaGACAGGACCAGACATATTC | + |
Preference number: 4 (lower is better) Translates to: DQGFLSQQLCRRYLWRQTAPRKL*TGPDIF Trigger: GAATATGTCTGGTCCTGTTCACAGCTTCCTTGGGGC...AGTCTGGCGCCAAAGGTATCTCCTGCATAGTTGTTGAGAAAGGAACCCCTGGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000128923.8 ENSMUST00000132293.2 |
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CDS-3UTR GCA 90 bp | GCTGACTCCATGACGAGCTGTAAGATGCCACTGCAGGAGACTATACCTAATACTGCGATGAGAAAACCCTaGCCCTCGGTCCCAATCCTG | + |
Preference number: 4 (lower is better) Translates to: ADSMTSCKMPLQETIPNTAMRKP*PSVPIL Trigger: CAGGATTGGGACCGAGGGGCAGGGTTTTCTCATCGC...AGTATTAGGTATAGTCTCCTGCAGTGGCATCTTACAGCTCGTCATGGAGTCAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060513.8 ENSMUST00000120367.8 |
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CDS-3UTR GCA 90 bp | AGGTCTTCTTTGGGCATGGCTCCTCAGAGCAGCCCTTCTAGCTCTGCTAAGAACAAAGGTGCTCCAAACTaGTTGCGGACCTTGAGGTGT | + |
Preference number: 4 (lower is better) Translates to: RSSLGMAPQSSPSSSAKNKGAPN*LRTLRC Trigger: ACACCTCAAGGTCCGCAAGCAGTTTGGAGCACCTTT...GTTCTTAGCAGAGCTAGAAGGGCTGCTCTGAGGAGCCATGCCCAAAGAAGACCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060513.8 ENSMUST00000120367.8 |
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CDS-3UTR GCA 90 bp | TCTAGCTCTGCTAAGAACTCTGTTCTTGTCTCAGAACCAGCAGCGTGGCTGACAGCTTCTGGCCAAAGGTaGTCCAAACTGCTTGCGGAC | + |
Preference number: 4 (lower is better) Translates to: SSSAKNSVLVSEPAAWLTASGQR*SKLLAD Trigger: GTCCGCAAGCAGTTTGGAGCACCTTTGGCCAGAAGC...TGTCAGCCACGCTGCTGGTTCTGAGACAAGAACAGAGTTCTTAGCAGAGCTAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060513.8 ENSMUST00000120367.8 |
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CDS-3UTR GCA 90 bp | GCTAAGAACTCTGTTCTTGTCTCAGAACCAGCAGCGTGGCTGACAGCTCAGTCTTCTTCCCGCTCTTCCTaGAAAGCCACTGCTGCAGTA | + |
Preference number: 4 (lower is better) Translates to: AKNSVLVSEPAAWLTAQSSSRSS*KATAAV Trigger: TACTGCAGCAGTGGCTTTGCAGGAAGAGCGGGAAGA...AGACTGAGCTGTCAGCCACGCTGCTGGTTCTGAGACAAGAACAGAGTTCTTAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060513.8 ENSMUST00000120367.8 |
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CDS-3UTR CCA 90 bp | TTGACCGCTTGTCTTTCCAGAATGAGGAAGGCAGTGTGCAGGTCTTCTTTGGGCGGAGGTACTGGCTTCTaGCCAAAGGTGCTCCAAACT | + |
Preference number: 4 (lower is better) Translates to: LTACLSRMRKAVCRSSLGGGTGF*PKVLQT Trigger: AGTTTGGAGCACCTTTGGCCAGAAGCCAGTACCTCC...GCCCAAAGAAGACCTGCACACTGCCTTCCTCATTCTGGAAAGACAAGCGGTCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060513.8 ENSMUST00000120367.8 |
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CDS-3UTR TCA 90 bp | AGGTCTTCTTTGGGCATGGCTCCTCAGAGCAGCCCTTCTAGCTCTGCTAAGAACCCAAGGCTTCAAAGATaGCAGAAGTATCAAGGCGAG | + |
Preference number: 4 (lower is better) Translates to: RSSLGMAPQSSPSSSAKNPRLQR*QKYQGE Trigger: CTCGCCTTGATACTTCTGTCATCTTTGAAGCCTTGG...GTTCTTAGCAGAGCTAGAAGGGCTGCTCTGAGGAGCCATGCCCAAAGAAGACCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060513.8 ENSMUST00000120367.8 |
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CDS-3UTR GCA 90 bp | CTGAGCCGGGCTGACTCCATGACGAGCTGTAAGATGCCACTGCAGGAGACTATAGGTGGGCAAAATTTGTaGCTCTGTTCCTCATTTCCA | + |
Preference number: 4 (lower is better) Translates to: LSRADSMTSCKMPLQETIGGQNL*LCSSFP Trigger: TGGAAATGAGGAACAGAGGCACAAATTTTGCCCACC...TATAGTCTCCTGCAGTGGCATCTTACAGCTCGTCATGGAGTCAGCCCGGCTCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060513.8 ENSMUST00000120367.8 |
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CDS-3UTR CCA 90 bp | TCTAGCTCTGCTAAGAACTCTGTTCTTGTCTCAGAACCAGCAGCGTGGCTGACAATCACTCCCACTGCCTaGTTCAGTGAGGCAGTAGGA | + |
Preference number: 4 (lower is better) Translates to: SSSAKNSVLVSEPAAWLTITPTA*FSEAVG Trigger: TCCTACTGCCTCACTGAACCAGGCAGTGGGAGTGAT...TGTCAGCCACGCTGCTGGTTCTGAGACAAGAACAGAGTTCTTAGCAGAGCTAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060513.8 |
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CDS-3UTR CCA 90 bp | CCCATAGGAGCATCAAGACTGATTCCAGCTGCACACAGACTCCAGGCGAGGCTCACCTTGAGGTGTTCTTaGGTTAGGATAACTGAAGCA | + |
Preference number: 4 (lower is better) Translates to: PIGASRLIPAAHRLQARLTLRCS*VRITEA Trigger: TGCTTCAGTTATCCTAACCCAAGAACACCTCAAGGT...GAGCCTCGCCTGGAGTCTGTGTGCAGCTGGAATCAGTCTTGATGCTCCTATGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060513.8 ENSMUST00000120367.8 |
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CDS-3UTR CCA 90 bp | GCTAAGAACTCTGTTCTTGTCTCAGAACCAGCAGCGTGGCTGACAGCTCAGTCTTGGAATTGGAGGTACTaGCTTCTGGCCAAAGGTGCT | + |
Preference number: 4 (lower is better) Translates to: AKNSVLVSEPAAWLTAQSWNWRY*LLAKGA Trigger: AGCACCTTTGGCCAGAAGCCAGTACCTCCAATTCCA...AGACTGAGCTGTCAGCCACGCTGCTGGTTCTGAGACAAGAACAGAGTTCTTAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060513.8 ENSMUST00000120367.8 |
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CDS-3UTR TCA 90 bp | CAGGGACAGCACAGTCTTCAAAGATCACTGCTCGGGTTGGCTGCGAGTTCCACCTCAAAGGCCACTTTCTaGAATCCTTTCTGTTCTTCA | + |
Preference number: 4 (lower is better) Translates to: QGQHSLQRSLLGLAASSTSKATF*NPFCSS Trigger: TGAAGAACAGAAAGGATTTCAGAAAGTGGCCTTTGA...GGTGGAACTCGCAGCCAACCCGAGCAGTGATCTTTGAAGACTGTGCTGTCCCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215693.2 |
||
CDS-3UTR TCA 90 bp | GCTGACTCCATGACGAGCTGTAAGATGCCACTGCAGGAGACTATACCTAATACTCCTTCTTGCCAAAGCTaGGACCAGGGGTTCCTTTCT | + |
Preference number: 4 (lower is better) Translates to: ADSMTSCKMPLQETIPNTPSCQS*DQGFLS Trigger: AGAAAGGAACCCCTGGTCTCAGCTTTGGCAAGAAGG...AGTATTAGGTATAGTCTCCTGCAGTGGCATCTTACAGCTCGTCATGGAGTCAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060513.8 ENSMUST00000120367.8 |
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CDS-3UTR GCA 90 bp | TCTAGCTCTGCTAAGAACTCTGTTCTTGTCTCAGAACCAGCAGCGTGGCTGACATCCCAGAGAGCAGGATaGAACATTGATCCTTCCACC | + |
Preference number: 4 (lower is better) Translates to: SSSAKNSVLVSEPAAWLTSQRAG*NIDPST Trigger: GGTGGAAGGATCAATGTTGCATCCTGCTCTCTGGGA...TGTCAGCCACGCTGCTGGTTCTGAGACAAGAACAGAGTTCTTAGCAGAGCTAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060513.8 ENSMUST00000120367.8 |
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CDS-3UTR GCA 90 bp | CTGGCCTCCCCAGACTTTACCTGTTTAATCAGGAAAAGCTTCATTCAAGTACCCCTGCAAAGCCACTGCTaGAGTACGGATCATCAGCCG | + |
Preference number: 4 (lower is better) Translates to: LASPDFTCLIRKSFIQVPLQSHC*STDHQP Trigger: CGGCTGATGATCCGTACTGCAGCAGTGGCTTTGCAG...GGGTACTTGAATGAAGCTTTTCCTGATTAAACAGGTAAAGTCTGGGGAGGCCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000060513.8 ENSMUST00000120367.8 |
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CDS-3UTR CCA 90 bp | GCTGACTCCATGACGAGCTGTAAGATGCCACTGCAGGAGACTATACCTAATACTTGCTTATATAGGCAGTaGTGCTGGTGCAGCCTGTGG | + |
Preference number: 4 (lower is better) Translates to: ADSMTSCKMPLQETIPNTCLYRQ*CWCSLW Trigger: CCACAGGCTGCACCAGCACCACTGCCTATATAAGCA...AGTATTAGGTATAGTCTCCTGCAGTGGCATCTTACAGCTCGTCATGGAGTCAGC 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060513.8 ENSMUST00000120367.8 |
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CDS-3UTR CCA 90 bp | TCTAGCTCTGCTAAGAACTCTGTTCTTGTCTCAGAACCAGCAGCGTGGCTGACACATGGTACAGAGCGGTaGGCAAAATTTGTGCCTCTG | + |
Preference number: 4 (lower is better) Translates to: SSSAKNSVLVSEPAAWLTHGTER*AKFVPL Trigger: CAGAGGCACAAATTTTGCCCACCGCTCTGTACCATG...TGTCAGCCACGCTGCTGGTTCTGAGACAAGAACAGAGTTCTTAGCAGAGCTAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060513.8 ENSMUST00000120367.8 |
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CDS-3UTR CCA 90 bp | GCTGACTCCATGACGAGCTGTAAGATGCCACTGCAGGAGACTATACCTAATACTGGAGGTACTGGCTTCTaGCCAAAGGTGCTCCAAACT | + |
Preference number: 4 (lower is better) Translates to: ADSMTSCKMPLQETIPNTGGTGF*PKVLQT Trigger: AGTTTGGAGCACCTTTGGCCAGAAGCCAGTACCTCC...AGTATTAGGTATAGTCTCCTGCAGTGGCATCTTACAGCTCGTCATGGAGTCAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060513.8 ENSMUST00000120367.8 |
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CDS-3UTR TCA 90 bp | AAGTACCCAGACCCTAAGGACAAGAATCACCAAAATGCCCATAGTGTGGATCCAGACCACATAGATGTCTaGCTCACCTCCCCCACTGAT | + |
Preference number: 4 (lower is better) Translates to: KYPDPKDKNHQNAHSVDPDHIDV*LTSPTD Trigger: ATCAGTGGGGGAGGTGAGTCAGACATCTATGTGGTC...TGGATCCACACTATGGGCATTTTGGTGATTCTTGTCCTTAGGGTCTGGGTACTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000060513.8 ENSMUST00000120367.8 |
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CDS-3UTR TCA 90 bp | AGCCATTTCCCGAGCTGCAAAGTCAAAGGCCACTTTCTGAAATCCTTTCTGTTCGCCCCAAGGAAGCTGTaGACAGGACCAGACATATTC | + |
Preference number: 4 (lower is better) Translates to: SHFPSCKVKGHFLKSFLFAPRKL*TGPDIF Trigger: GAATATGTCTGGTCCTGTTCACAGCTTCCTTGGGGC...GAACAGAAAGGATTTCAGAAAGTGGCCTTTGACTTTGCAGCTCGGGAAATGGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000128923.8 ENSMUST00000132293.2 |
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CDS-3UTR GCA 90 bp | TCTAGCTCTGCTAAGAACTCTGTTCTTGTCTCAGAACCAGCAGCGTGGCTGACAAGCCATTTCCCGAGCTaGAAAGTCAAAGGCCACTTT | + |
Preference number: 4 (lower is better) Translates to: SSSAKNSVLVSEPAAWLTSHFPS*KVKGHF Trigger: AAAGTGGCCTTTGACTTTGCAGCTCGGGAAATGGCT...TGTCAGCCACGCTGCTGGTTCTGAGACAAGAACAGAGTTCTTAGCAGAGCTAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060513.8 ENSMUST00000120367.8 |
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CDS-3UTR CCA 90 bp | TCTAGCTCTGCTAAGAACTCTGTTCTTGTCTCAGAACCAGCAGCGTGGCTGACATGCATCTGCAAAGCCTaGTTGCAGATAGCAAAGCAC | + |
Preference number: 4 (lower is better) Translates to: SSSAKNSVLVSEPAAWLTCICKA*LQIAKH Trigger: GTGCTTTGCTATCTGCAACCAGGCTTTGCAGATGCA...TGTCAGCCACGCTGCTGGTTCTGAGACAAGAACAGAGTTCTTAGCAGAGCTAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060513.8 ENSMUST00000120367.8 |
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CDS-3UTR TCA 90 bp | TCTAGCTCTGCTAAGAACTCTGTTCTTGTCTCAGAACCAGCAGCGTGGCTGACAAGGCCTTGGAACCATTaGGGATGTAATGATCTCCTT | + |
Preference number: 4 (lower is better) Translates to: SSSAKNSVLVSEPAAWLTRPWNH*GCNDLL Trigger: AAGGAGATCATTACATCCTCAATGGTTCCAAGGCCT...TGTCAGCCACGCTGCTGGTTCTGAGACAAGAACAGAGTTCTTAGCAGAGCTAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060513.8 ENSMUST00000120367.8 |
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CDS-3UTR TCA 90 bp | AAGTACCCAGACCCTAAGGACAAGAATCACCAAAATGCCCATAGTGTGGATCCACACCAGTTCGGCACATaGCCACATAGATGTCTGACT | + |
Preference number: 4 (lower is better) Translates to: KYPDPKDKNHQNAHSVDPHQFGT*PHRCLT Trigger: AGTCAGACATCTATGTGGTCATGTGCCGAACTGGTG...TGGATCCACACTATGGGCATTTTGGTGATTCTTGTCCTTAGGGTCTGGGTACTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060513.8 ENSMUST00000120367.8 |
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CDS-3UTR TCA 90 bp | CCGCCATATTGGGAGCCATTTCCCGAGCTGCAAAGTCAAAGGCCACTTTCTGAACCAGACATATTCAATTaGTCGATGCAGAAGGTGATG | + |
Preference number: 4 (lower is better) Translates to: PPYWEPFPELQSQRPLSEPDIFN*SMQKVM Trigger: CATCACCTTCTGCATCGATCAATTGAATATGTCTGG...TTCAGAAAGTGGCCTTTGACTTTGCAGCTCGGGAAATGGCTCCCAATATGGCGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000128923.8 ENSMUST00000132293.2 |
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CDS-3UTR GCA 90 bp | CTGGCCTCCCCAGACTTTACCTGTTTAATCAGGAAAAGCTTCATTCAAGTACCCAAAGGTGCTCCAAACTaGTTGCGGACCTTGAGGTGT | + |
Preference number: 4 (lower is better) Translates to: LASPDFTCLIRKSFIQVPKGAPN*LRTLRC Trigger: ACACCTCAAGGTCCGCAAGCAGTTTGGAGCACCTTT...GGGTACTTGAATGAAGCTTTTCCTGATTAAACAGGTAAAGTCTGGGGAGGCCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060513.8 ENSMUST00000120367.8 |
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CDS-3UTR TCA 90 bp | GATCTGTCCACTGCCCTGGCCTCCCCAGACTTTACCTGTTTAATCAGGAAAAGCTCAAAGGCCACTTTCTaGAATCCTTTCTGTTCTTCA | + |
Preference number: 4 (lower is better) Translates to: DLSTALASPDFTCLIRKSSKATF*NPFCSS Trigger: TGAAGAACAGAAAGGATTTCAGAAAGTGGCCTTTGA...GCTTTTCCTGATTAAACAGGTAAAGTCTGGGGAGGCCAGGGCAGTGGACAGATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060513.8 ENSMUST00000120367.8 |
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CDS-3UTR TCA 90 bp | AAGCTGAGACCAGGGGTTCCTTTCTCAACAACTATGCAGGAGATACCTTTGGCGCCAGACATATTCAATTaGTCGATGCAGAAGGTGATG | + |
Preference number: 4 (lower is better) Translates to: KLRPGVPFSTTMQEIPLAPDIFN*SMQKVM Trigger: CATCACCTTCTGCATCGATCAATTGAATATGTCTGG...CGCCAAAGGTATCTCCTGCATAGTTGTTGAGAAAGGAACCCCTGGTCTCAGCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000128923.8 ENSMUST00000132293.2 |
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CDS-3UTR GCA 90 bp | GCTGACTCCATGACGAGCTGTAAGATGCCACTGCAGGAGACTATACCTAATACTGGTGGGCAAAATTTGTaGCTCTGTTCCTCATTTCCA | + |
Preference number: 4 (lower is better) Translates to: ADSMTSCKMPLQETIPNTGGQNL*LCSSFP Trigger: TGGAAATGAGGAACAGAGGCACAAATTTTGCCCACC...AGTATTAGGTATAGTCTCCTGCAGTGGCATCTTACAGCTCGTCATGGAGTCAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060513.8 ENSMUST00000120367.8 |
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CDS-3UTR GCA 90 bp | CTGGCCTCCCCAGACTTTACCTGTTTAATCAGGAAAAGCTTCATTCAAGTACCCCTTGGTGGCCATATCTaGCAACTGGAATTGGAGGTA | + |
Preference number: 4 (lower is better) Translates to: LASPDFTCLIRKSFIQVPLGGHI*QLELEV Trigger: TACCTCCAATTCCAGTTGGCAGATATGGCCACCAAG...GGGTACTTGAATGAAGCTTTTCCTGATTAAACAGGTAAAGTCTGGGGAGGCCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000060513.8 ENSMUST00000120367.8 |
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CDS-3UTR CCA 90 bp | TGCTTTTGGAGAAAGCATTTGGTCACACTTCTTTATAAGACATCAGTGAGGTTGTATAGGCAGTGGTGCTaGTGCAGCCTGTGGCCAAGG | + |
Preference number: 4 (lower is better) Translates to: CFWRKHLVTLLYKTSVRLYRQWC*CSLWPR Trigger: CCTTGGCCACAGGCTGCACCAGCACCACTGCCTATA...CAACCTCACTGATGTCTTATAAAGAAGTGTGACCAAATGCTTTCTCCAAAAGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060513.8 ENSMUST00000120367.8 |
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CDS-3UTR CCA 90 bp | TCAGAATACCGTAACAAAATACCACAAGTTGAGTGGTGTCACCAAGAAACTAAGCGGTCCCAATCCTGTTaGCCACAGGGACAGCACAGT | + |
Preference number: 4 (lower is better) Translates to: SEYRNKIPQVEWCHQETKRSQSC*PQGQHS Trigger: ACTGTGCTGTCCCTGTGGCCAACAGGATTGGGACCG...CTTAGTTTCTTGGTGACACCACTCAACTTGTGGTATTTTGTTACGGTATTCTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060513.8 ENSMUST00000120367.8 |
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CDS-3UTR CCA 90 bp | TTTATTTCATGGTTCCTGGAGTTAAAGGTGCACCCTAACTCATTGCTTAGCAGTCCTTCTAGGATCTGGTaGACCCTGGAGTCCCGCATA | + |
Preference number: 4 (lower is better) Translates to: FISWFLELKVHPNSLLSSPSRIW*TLESRI Trigger: TATGCGGGACTCCAGGGTCCACCAGATCCTAGAAGG...ACTGCTAAGCAATGAGTTAGGGTGCACCTTTAACTCCAGGAACCATGAAATAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060513.8 ENSMUST00000120367.8 |
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CDS-3UTR TCA 90 bp | CTGGCCTCCCCAGACTTTACCTGTTTAATCAGGAAAAGCTTCATTCAAGTACCCAGGCCTTGGAACCATTaGGGATGTAATGATCTCCTT | + |
Preference number: 4 (lower is better) Translates to: LASPDFTCLIRKSFIQVPRPWNH*GCNDLL Trigger: AAGGAGATCATTACATCCTCAATGGTTCCAAGGCCT...GGGTACTTGAATGAAGCTTTTCCTGATTAAACAGGTAAAGTCTGGGGAGGCCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060513.8 ENSMUST00000120367.8 |
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CDS-3UTR GCA 90 bp | TCAGAATACCGTAACAAAATACCACAAGTTGAGTGGTGTCACCAAGAAACTAAGGCTTCTGGCCAAAGGTaGTCCAAACTGCTTGCGGAC | + |
Preference number: 4 (lower is better) Translates to: SEYRNKIPQVEWCHQETKASGQR*SKLLAD Trigger: GTCCGCAAGCAGTTTGGAGCACCTTTGGCCAGAAGC...CTTAGTTTCTTGGTGACACCACTCAACTTGTGGTATTTTGTTACGGTATTCTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060513.8 ENSMUST00000120367.8 |
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CDS-3UTR CCA 90 bp | ATACCACAAGTTGAGTGGTGTCACCAAGAAACTAAGTCAGAATGTCACAAACGTCAAAGAGCTTGGCCATaGAACACAGGGCCACTGCAT | + |
Preference number: 4 (lower is better) Translates to: IPQVEWCHQETKSECHKRQRAWP*NTGPLH Trigger: ATGCAGTGGCCCTGTGTTCCATGGCCAAGCTCTTTG...ACGTTTGTGACATTCTGACTTAGTTTCTTGGTGACACCACTCAACTTGTGGTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060513.8 ENSMUST00000120367.8 |
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CDS-3UTR CCA 90 bp | ATACCACAAGTTGAGTGGTGTCACCAAGAAACTAAGTCAGAATGTCACAAACGTGGATCTGGTGGACCCTaGAGTCCCGCATATACTGTT | + |
Preference number: 4 (lower is better) Translates to: IPQVEWCHQETKSECHKRGSGGP*SPAYTV Trigger: AACAGTATATGCGGGACTCCAGGGTCCACCAGATCC...ACGTTTGTGACATTCTGACTTAGTTTCTTGGTGACACCACTCAACTTGTGGTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060513.8 ENSMUST00000120367.8 |
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CDS-3UTR CCA 90 bp | TTTATTTCATGGTTCCTGGAGTTAAAGGTGCACCCTAACTCATTGCTTAGCAGTATCACTCCCAGCACCTaGTTCAGTGAGGCAGTAGGA | + |
Preference number: 4 (lower is better) Translates to: FISWFLELKVHPNSLLSSITPST*FSEAVG Trigger: TCCTACTGCCTCACTGAACCAGGTGCTGGGAGTGAT...ACTGCTAAGCAATGAGTTAGGGTGCACCTTTAACTCCAGGAACCATGAAATAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120367.8 |
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CDS-3UTR TCA 90 bp | GCTGACTCCATGACGAGCTGTAAGATGCCACTGCAGGAGACTATACCTAATACTTCAAAGGCCACTTTCTaGAATCCTTTCTGTTCTTCA | + |
Preference number: 4 (lower is better) Translates to: ADSMTSCKMPLQETIPNTSKATF*NPFCSS Trigger: TGAAGAACAGAAAGGATTTCAGAAAGTGGCCTTTGA...AGTATTAGGTATAGTCTCCTGCAGTGGCATCTTACAGCTCGTCATGGAGTCAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060513.8 ENSMUST00000120367.8 |
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CDS-3UTR GCA 90 bp | TTTATTTCATGGTTCCTGGAGTTAAAGGTGCACCCTAACTCATTGCTTAGCAGTAGCCATTTCCCGAGCTaGAAAGTCAAAGGCCACTTT | + |
Preference number: 4 (lower is better) Translates to: FISWFLELKVHPNSLLSSSHFPS*KVKGHF Trigger: AAAGTGGCCTTTGACTTTGCAGCTCGGGAAATGGCT...ACTGCTAAGCAATGAGTTAGGGTGCACCTTTAACTCCAGGAACCATGAAATAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060513.8 ENSMUST00000120367.8 |
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CDS-3UTR GCA 90 bp | TCAGAATACCGTAACAAAATACCACAAGTTGAGTGGTGTCACCAAGAAACTAAGTCCCAGAGAGCAGGATaGAACATTGATCCTTCCACC | + |
Preference number: 4 (lower is better) Translates to: SEYRNKIPQVEWCHQETKSQRAG*NIDPST Trigger: GGTGGAAGGATCAATGTTGCATCCTGCTCTCTGGGA...CTTAGTTTCTTGGTGACACCACTCAACTTGTGGTATTTTGTTACGGTATTCTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060513.8 ENSMUST00000120367.8 |
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CDS-3UTR CCA 90 bp | TGCTTTTGGAGAAAGCATTTGGTCACACTTCTTTATAAGACATCAGTGAGGTTGTGCATCTGCAAAGCCTaGTTGCAGATAGCAAAGCAC | + |
Preference number: 4 (lower is better) Translates to: CFWRKHLVTLLYKTSVRLCICKA*LQIAKH Trigger: GTGCTTTGCTATCTGCAACCAGGCTTTGCAGATGCA...CAACCTCACTGATGTCTTATAAAGAAGTGTGACCAAATGCTTTCTCCAAAAGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060513.8 ENSMUST00000120367.8 |
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CDS-3UTR GCA 90 bp | TGCTTTTGGAGAAAGCATTTGGTCACACTTCTTTATAAGACATCAGTGAGGTTGTCCTCATCACTTCATTaGTACCTTCTAGGATCTGGT | + |
Preference number: 4 (lower is better) Translates to: CFWRKHLVTLLYKTSVRLSSSLH*YLLGSG Trigger: ACCAGATCCTAGAAGGTAGCAATGAAGTGATGAGGA...CAACCTCACTGATGTCTTATAAAGAAGTGTGACCAAATGCTTTCTCCAAAAGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060513.8 ENSMUST00000120367.8 |
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CDS-3UTR GCA 90 bp | TCAGAATACCGTAACAAAATACCACAAGTTGAGTGGTGTCACCAAGAAACTAAGTCCTCATCACTTCATTaGTACCTTCTAGGATCTGGT | + |
Preference number: 4 (lower is better) Translates to: SEYRNKIPQVEWCHQETKSSSLH*YLLGSG Trigger: ACCAGATCCTAGAAGGTAGCAATGAAGTGATGAGGA...CTTAGTTTCTTGGTGACACCACTCAACTTGTGGTATTTTGTTACGGTATTCTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060513.8 ENSMUST00000120367.8 |
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CDS-3UTR CCA 90 bp | TCAGAATACCGTAACAAAATACCACAAGTTGAGTGGTGTCACCAAGAAACTAAGACCTTGAGGTGTTCTTaGGTTAGGATAACTGAAGCA | + |
Preference number: 4 (lower is better) Translates to: SEYRNKIPQVEWCHQETKTLRCS*VRITEA Trigger: TGCTTCAGTTATCCTAACCCAAGAACACCTCAAGGT...CTTAGTTTCTTGGTGACACCACTCAACTTGTGGTATTTTGTTACGGTATTCTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060513.8 ENSMUST00000120367.8 |
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3UTR CAA 72 bp | TCATGGTTCCTGGAGTTAAAGGTGCACCCTAACTCATaGCTTAGCAGTAGGTTCCCAAATATTTATTTCATC | + |
Preference number: 4 (lower is better) Translates to: SWFLELKVHPNS*LSSRFPNIYFI Trigger: GATGAAATAAATATTTGGGAACCTACTGCTAAGCAATGAGTTAGGGTGCACCTTTAACTCCAGGAACCATGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060513.8 ENSMUST00000120367.8 |
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3UTR CAA 72 bp | ATAGCCTCAGCCCTATTTTGCTTTTGGAGAAAGCATTaGGTCACACTTCTTTATAAGACATCAGTGAGGTTG | + |
Preference number: 4 (lower is better) Translates to: IASALFCFWRKH*VTLLYKTSVRL Trigger: CAACCTCACTGATGTCTTATAAAGAAGTGTGACCAAATGCTTTCTCCAAAAGCAAAATAGGGCTGAGGCTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060513.8 ENSMUST00000120367.8 |
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CDS TCA 90 bp | CCCAAGGAAGGATCGATGCAGAAGGTGATGCTCCGGTGGTGGGTCTaGGCCAGGGACTTGAGTGCCGCGCGCAGACAGCCAAAGCGCCTG | + |
Preference number: 5 (lower is better) Translates to: PKEGSMQKVMLRWWV*ARDLSAARRQPKRL Trigger: CAGGCGCTTTGGCTGTCTGCGCGCGGCACTCAAGTCCCTGGCTCAGACCCACCACCGGAGCATCACCTTCTGCATCGATCCTTCCTTGGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060513.8 ENSMUST00000120367.8 |
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CDS GCA 90 bp | GCAGAAGGTGATGCTCCGGTGGTGGGTCTGAGCCAGGGACTTGAGTaGCGCGCGCAGACAGCCAAAGCGCCTGTATCCGGACCGCAACAT | + |
Preference number: 5 (lower is better) Translates to: AEGDAPVVGLSQGLE*RAQTAKAPVSGPQH Trigger: ATGTTGCGGTCCGGATACAGGCGCTTTGGCTGTCTGCGCGCGGCACTCAAGTCCCTGGCTCAGACCCACCACCGGAGCATCACCTTCTGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000060513.8 ENSMUST00000120367.8 ENSMUST00000128923.8 ENSMUST00000132293.2 |
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CDS-3UTR CAA 90 bp | CCCATAGGAGCATCAAGACTGATTCCAGCTGCACACAGACTCCAGGCGAGGCTCAGATCACTGCTCGGGTaGGCTGCGAGTTCCACCCCA | + |
Preference number: 5 (lower is better) Translates to: PIGASRLIPAAHRLQARLRSLLG*AASSTP Trigger: TGGGGTGGAACTCGCAGCCAACCCGAGCAGTGATCT...GAGCCTCGCCTGGAGTCTGTGTGCAGCTGGAATCAGTCTTGATGCTCCTATGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060513.8 ENSMUST00000120367.8 |
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CDS GCA 90 bp | GCACTCCTCTGTAGCAAAGAGCTTGGCCATGGAACACAGGGCCACTaGATCTTCCCGCTCTTCCTGCAAAGCCACTGCTGCAGTACGGAT | + |
Preference number: 5 (lower is better) Translates to: ALLCSKELGHGTQGH*IFPLFLQSHCCSTD Trigger: ATCCGTACTGCAGCAGTGGCTTTGCAGGAAGAGCGGGAAGATGCAGTGGCCCTGTGTTCCATGGCCAAGCTCTTTGCTACAGAGGAGTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060513.8 ENSMUST00000120367.8 |
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CDS CCA 90 bp | CCACTGCTGCAGTACGGATCATCAGCCGGGAAGCAACTAGCTTGGTaGCCATATCTGCCAACTGGAATTGGAGGTACTGGCTTCTGGCCA | + |
Preference number: 5 (lower is better) Translates to: PLLQYGSSAGKQLAW*PYLPTGIGGTGFWP Trigger: TGGCCAGAAGCCAGTACCTCCAATTCCAGTTGGCAGATATGGCCACCAAGCTAGTTGCTTCCCGGCTGATGATCCGTACTGCAGCAGTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060513.8 ENSMUST00000120367.8 |
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CDS-3UTR CAA 90 bp | GATCTGTCCACTGCCCTGGCCTCCCCAGACTTTACCTGTTTAATCAGGAAAAGCTCGGTCCCAATCCTGTaGGCCACAGGGACAGCACAG | + |
Preference number: 5 (lower is better) Translates to: DLSTALASPDFTCLIRKSSVPIL*ATGTAQ Trigger: CTGTGCTGTCCCTGTGGCCAACAGGATTGGGACCGA...GCTTTTCCTGATTAAACAGGTAAAGTCTGGGGAGGCCAGGGCAGTGGACAGATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060513.8 ENSMUST00000120367.8 |
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CDS-3UTR CAA 90 bp | CCCATAGGAGCATCAAGACTGATTCCAGCTGCACACAGACTCCAGGCGAGGCTCATCTGCCAACTGGAATaGGAGGTACTGGCTTCTGGC | + |
Preference number: 5 (lower is better) Translates to: PIGASRLIPAAHRLQARLICQLE*EVLASG Trigger: GCCAGAAGCCAGTACCTCCAATTCCAGTTGGCAGAT...GAGCCTCGCCTGGAGTCTGTGTGCAGCTGGAATCAGTCTTGATGCTCCTATGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060513.8 ENSMUST00000120367.8 |
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CDS CCA 90 bp | AAGCCACTGCTGCAGTACGGATCATCAGCCGGGAAGCAACTAGCTTaGTGGCCATATCTGCCAACTGGAATTGGAGGTACTGGCTTCTGG | + |
Preference number: 5 (lower is better) Translates to: KPLLQYGSSAGKQLA*WPYLPTGIGGTGFW Trigger: CCAGAAGCCAGTACCTCCAATTCCAGTTGGCAGATATGGCCACCAAGCTAGTTGCTTCCCGGCTGATGATCCGTACTGCAGCAGTGGCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060513.8 ENSMUST00000120367.8 |
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CDS-3UTR CAA 90 bp | AGGTCTTCTTTGGGCATGGCTCCTCAGAGCAGCCCTTCTAGCTCTGCTAAGAACTCTGTAGCAAAGAGCTaGGCCATGGAACACAGGGCC | + |
Preference number: 5 (lower is better) Translates to: RSSLGMAPQSSPSSSAKNSVAKS*AMEHRA Trigger: GGCCCTGTGTTCCATGGCCAAGCTCTTTGCTACAGA...GTTCTTAGCAGAGCTAGAAGGGCTGCTCTGAGGAGCCATGCCCAAAGAAGACCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060513.8 ENSMUST00000120367.8 |
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CDS CCA 90 bp | ATCATCAGCCGGGAAGCAACTAGCTTGGTGGCCATATCTGCCAACTaGAATTGGAGGTACTGGCTTCTGGCCAAAGGTGCTCCAAACTGC | + |
Preference number: 5 (lower is better) Translates to: IISREATSLVAISAN*NWRYWLLAKGAPNC Trigger: GCAGTTTGGAGCACCTTTGGCCAGAAGCCAGTACCTCCAATTCCAGTTGGCAGATATGGCCACCAAGCTAGTTGCTTCCCGGCTGATGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060513.8 ENSMUST00000120367.8 |
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CDS-3UTR CAA 90 bp | TTGACCGCTTGTCTTTCCAGAATGAGGAAGGCAGTGTGCAGGTCTTCTTTGGGCGGTGCTCCAAACTGCTaGCGGACCTTGAGGTGTTCT | + |
Preference number: 5 (lower is better) Translates to: LTACLSRMRKAVCRSSLGGAPNC*RTLRCS Trigger: AGAACACCTCAAGGTCCGCAAGCAGTTTGGAGCACC...GCCCAAAGAAGACCTGCACACTGCCTTCCTCATTCTGGAAAGACAAGCGGTCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060513.8 ENSMUST00000120367.8 |
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CDS-3UTR CAA 90 bp | CTGAGCCGGGCTGACTCCATGACGAGCTGTAAGATGCCACTGCAGGAGACTATAATCTGCAAAGCCTGGTaGCAGATAGCAAAGCACTCC | + |
Preference number: 5 (lower is better) Translates to: LSRADSMTSCKMPLQETIICKAW*QIAKHS Trigger: GGAGTGCTTTGCTATCTGCAACCAGGCTTTGCAGAT...TATAGTCTCCTGCAGTGGCATCTTACAGCTCGTCATGGAGTCAGCCCGGCTCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060513.8 ENSMUST00000120367.8 |
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CDS-3UTR CAA 90 bp | AAGTACCCAGACCCTAAGGACAAGAATCACCAAAATGCCCATAGTGTGGATCCAAGATCACTGCTCGGGTaGGCTGCGAGTTCCACCCCA | + |
Preference number: 5 (lower is better) Translates to: KYPDPKDKNHQNAHSVDPRSLLG*AASSTP Trigger: TGGGGTGGAACTCGCAGCCAACCCGAGCAGTGATCT...TGGATCCACACTATGGGCATTTTGGTGATTCTTGTCCTTAGGGTCTGGGTACTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060513.8 ENSMUST00000120367.8 |
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CDS-3UTR CAA 90 bp | GCTAAGAACTCTGTTCTTGTCTCAGAACCAGCAGCGTGGCTGACAGCTCAGTCTATCTGCCAACTGGAATaGGAGGTACTGGCTTCTGGC | + |
Preference number: 5 (lower is better) Translates to: AKNSVLVSEPAAWLTAQSICQLE*EVLASG Trigger: GCCAGAAGCCAGTACCTCCAATTCCAGTTGGCAGAT...AGACTGAGCTGTCAGCCACGCTGCTGGTTCTGAGACAAGAACAGAGTTCTTAGC 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060513.8 ENSMUST00000120367.8 |
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CDS-3UTR CAA 90 bp | TCTAGCTCTGCTAAGAACTCTGTTCTTGTCTCAGAACCAGCAGCGTGGCTGACATCTGTAGCAAAGAGCTaGGCCATGGAACACAGGGCC | + |
Preference number: 5 (lower is better) Translates to: SSSAKNSVLVSEPAAWLTSVAKS*AMEHRA Trigger: GGCCCTGTGTTCCATGGCCAAGCTCTTTGCTACAGA...TGTCAGCCACGCTGCTGGTTCTGAGACAAGAACAGAGTTCTTAGCAGAGCTAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060513.8 ENSMUST00000120367.8 |
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CDS-3UTR CAA 90 bp | AGGTCTTCTTTGGGCATGGCTCCTCAGAGCAGCCCTTCTAGCTCTGCTAAGAACGTCCCGCATATACTGTaGAACAGCATAGTCCTTCAG | + |
Preference number: 5 (lower is better) Translates to: RSSLGMAPQSSPSSSAKNVPHIL*NSIVLQ Trigger: CTGAAGGACTATGCTGTTCAACAGTATATGCGGGAC...GTTCTTAGCAGAGCTAGAAGGGCTGCTCTGAGGAGCCATGCCCAAAGAAGACCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060513.8 ENSMUST00000120367.8 |
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CDS GCA 90 bp | AACTGGAATTGGAGGTACTGGCTTCTGGCCAAAGGTGCTCCAAACTaGTTGCGGACCTTGAGGTGTTCTTGGGTTAGGATAACTGAAGCA | + |
Preference number: 5 (lower is better) Translates to: NWNWRYWLLAKGAPN*LRTLRCSWVRITEA Trigger: TGCTTCAGTTATCCTAACCCAAGAACACCTCAAGGTCCGCAAGCAGTTTGGAGCACCTTTGGCCAGAAGCCAGTACCTCCAATTCCAGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060513.8 ENSMUST00000120367.8 |
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CDS CCA 90 bp | GCATCCTCATCACTTCATTGCTACCTTCTAGGATCTGGTGGACCCTaGAGTCCCGCATATACTGTTGAACAGCATAGTCCTTCAGATAGC | + |
Preference number: 5 (lower is better) Translates to: ASSSLHCYLLGSGGP*SPAYTVEQHSPSDS Trigger: GCTATCTGAAGGACTATGCTGTTCAACAGTATATGCGGGACTCCAGGGTCCACCAGATCCTAGAAGGTAGCAATGAAGTGATGAGGATGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060513.8 ENSMUST00000120367.8 |
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CDS-3UTR CAA 90 bp | GCTGACTCCATGACGAGCTGTAAGATGCCACTGCAGGAGACTATACCTAATACTATCTGCAAAGCCTGGTaGCAGATAGCAAAGCACTCC | + |
Preference number: 5 (lower is better) Translates to: ADSMTSCKMPLQETIPNTICKAW*QIAKHS Trigger: GGAGTGCTTTGCTATCTGCAACCAGGCTTTGCAGAT...AGTATTAGGTATAGTCTCCTGCAGTGGCATCTTACAGCTCGTCATGGAGTCAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060513.8 ENSMUST00000120367.8 |
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CDS-3UTR CAA 90 bp | TTGACCGCTTGTCTTTCCAGAATGAGGAAGGCAGTGTGCAGGTCTTCTTTGGGCATCCTCATCACTTCATaGCTACCTTCTAGGATCTGG | + |
Preference number: 5 (lower is better) Translates to: LTACLSRMRKAVCRSSLGILITS*LPSRIW Trigger: CCAGATCCTAGAAGGTAGCAATGAAGTGATGAGGAT...GCCCAAAGAAGACCTGCACACTGCCTTCCTCATTCTGGAAAGACAAGCGGTCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060513.8 ENSMUST00000120367.8 |
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CDS GCA 90 bp | CTCCTTCTGATCCCACTCCGCCATATTGGGAGCCATTTCCCGAGCTaGAAAGTCAAAGGCCACTTTCTGAAATCCTTTCTGTTCTTCATT | + |
Preference number: 5 (lower is better) Translates to: LLLIPLRHIGSHFPS*KVKGHFLKSFLFFI Trigger: AATGAAGAACAGAAAGGATTTCAGAAAGTGGCCTTTGACTTTGCAGCTCGGGAAATGGCTCCCAATATGGCGGAGTGGGATCAGAAGGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060513.8 ENSMUST00000120367.8 |
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CDS GCA 90 bp | ATGCTTCTGATCCCACTCCGCCATATTGGGAGCCATTTCCCGAGCTaGAAAGTCAAAGGCCACTTTCTGAAATCCTTTCTGTTCTTCATT | + |
Preference number: 5 (lower is better) Translates to: MLLIPLRHIGSHFPS*KVKGHFLKSFLFFI Trigger: AATGAAGAACAGAAAGGATTTCAGAAAGTGGCCTTTGACTTTGCAGCTCGGGAAATGGCTCCCAATATGGCGGAGTGGGATCAGAAGCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215693.2 |
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CDS TCA 90 bp | ATATTGGGAGCCATTTCCCGAGCTGCAAAGTCAAAGGCCACTTTCTaGAATCCTTTCTGTTCTTCATTTAGCCCCAAGGAAGGATCGATG | + |
Preference number: 5 (lower is better) Translates to: ILGAISRAAKSKATF*NPFCSSFSPKEGSM Trigger: CATCGATCCTTCCTTGGGGCTAAATGAAGAACAGAAAGGATTTCAGAAAGTGGCCTTTGACTTTGCAGCTCGGGAAATGGCTCCCAATAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060513.8 ENSMUST00000120367.8 ENSMUST00000215693.2 |
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CDS-3UTR CAA 90 bp | TGCTTTTGGAGAAAGCATTTGGTCACACTTCTTTATAAGACATCAGTGAGGTTGGGTGCTCCAAACTGCTaGCGGACCTTGAGGTGTTCT | + |
Preference number: 5 (lower is better) Translates to: CFWRKHLVTLLYKTSVRLGAPNC*RTLRCS Trigger: AGAACACCTCAAGGTCCGCAAGCAGTTTGGAGCACC...CAACCTCACTGATGTCTTATAAAGAAGTGTGACCAAATGCTTTCTCCAAAAGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060513.8 ENSMUST00000120367.8 |
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CDS-3UTR CAA 90 bp | TTTATTTCATGGTTCCTGGAGTTAAAGGTGCACCCTAACTCATTGCTTAGCAGTAGCGGTGGGCAAAATTaGTGCCTCTGTTCCTCATTT | + |
Preference number: 5 (lower is better) Translates to: FISWFLELKVHPNSLLSSSGGQN*CLCSSF Trigger: AAATGAGGAACAGAGGCACAAATTTTGCCCACCGCT...ACTGCTAAGCAATGAGTTAGGGTGCACCTTTAACTCCAGGAACCATGAAATAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060513.8 ENSMUST00000120367.8 |
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CDS-3UTR CAA 90 bp | TGCTTTTGGAGAAAGCATTTGGTCACACTTCTTTATAAGACATCAGTGAGGTTGAGCGGTGGGCAAAATTaGTGCCTCTGTTCCTCATTT | + |
Preference number: 5 (lower is better) Translates to: CFWRKHLVTLLYKTSVRLSGGQN*CLCSSF Trigger: AAATGAGGAACAGAGGCACAAATTTTGCCCACCGCT...CAACCTCACTGATGTCTTATAAAGAAGTGTGACCAAATGCTTTCTCCAAAAGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060513.8 ENSMUST00000120367.8 |
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CDS-3UTR CAA 90 bp | TCAGAATACCGTAACAAAATACCACAAGTTGAGTGGTGTCACCAAGAAACTAAGGTCCCGCATATACTGTaGAACAGCATAGTCCTTCAG | + |
Preference number: 5 (lower is better) Translates to: SEYRNKIPQVEWCHQETKVPHIL*NSIVLQ Trigger: CTGAAGGACTATGCTGTTCAACAGTATATGCGGGAC...CTTAGTTTCTTGGTGACACCACTCAACTTGTGGTATTTTGTTACGGTATTCTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060513.8 ENSMUST00000120367.8 |
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CDS GCA 72 bp | GATGCTCCGGTGGTGGGTCTGAGCCAGGGACTTGAGTaGCGCGCGCAGACAGCCAAAGCGCCTGTATCCGGA | + |
Preference number: 6 (lower is better) Translates to: DAPVVGLSQGLE*RAQTAKAPVSG Trigger: TCCGGATACAGGCGCTTTGGCTGTCTGCGCGCGGCACTCAAGTCCCTGGCTCAGACCCACCACCGGAGCATC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000060513.8 ENSMUST00000120367.8 ENSMUST00000128923.8 ENSMUST00000132293.2 |
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CDS TCA 72 bp | GGATCGATGCAGAAGGTGATGCTCCGGTGGTGGGTCTaGGCCAGGGACTTGAGTGCCGCGCGCAGACAGCCA | + |
Preference number: 6 (lower is better) Translates to: GSMQKVMLRWWV*ARDLSAARRQP Trigger: TGGCTGTCTGCGCGCGGCACTCAAGTCCCTGGCTCAGACCCACCACCGGAGCATCACCTTCTGCATCGATCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060513.8 ENSMUST00000120367.8 ENSMUST00000215693.2 |
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CDS GCA 72 bp | ATGGAACACAGGGCCACTGCATCTTCCCGCTCTTCCTaGAAAGCCACTGCTGCAGTACGGATCATCAGCCGG | + |
Preference number: 6 (lower is better) Translates to: MEHRATASSRSS*KATAAVRIISR Trigger: CCGGCTGATGATCCGTACTGCAGCAGTGGCTTTGCAGGAAGAGCGGGAAGATGCAGTGGCCCTGTGTTCCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060513.8 ENSMUST00000120367.8 |
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CDS GCA 72 bp | TGTAGCAAAGAGCTTGGCCATGGAACACAGGGCCACTaGATCTTCCCGCTCTTCCTGCAAAGCCACTGCTGC | + |
Preference number: 6 (lower is better) Translates to: CSKELGHGTQGH*IFPLFLQSHCC Trigger: GCAGCAGTGGCTTTGCAGGAAGAGCGGGAAGATGCAGTGGCCCTGTGTTCCATGGCCAAGCTCTTTGCTACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060513.8 ENSMUST00000120367.8 |
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CDS CCA 72 bp | CCAGGCACACATGCTTCTGATCCCACTCCGCCATATTaGGAGCCATTTCCCGAGCTGCAAAGTCAAAGGCCA | + |
Preference number: 6 (lower is better) Translates to: PGTHASDPTPPY*EPFPELQSQRP Trigger: TGGCCTTTGACTTTGCAGCTCGGGAAATGGCTCCCAATATGGCGGAGTGGGATCAGAAGCATGTGTGCCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215693.2 |
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CDS CCA 72 bp | CGGGAAGCAACTAGCTTGGTGGCCATATCTGCCAACTaGAATTGGAGGTACTGGCTTCTGGCCAAAGGTGCT | + |
Preference number: 6 (lower is better) Translates to: REATSLVAISAN*NWRYWLLAKGA Trigger: AGCACCTTTGGCCAGAAGCCAGTACCTCCAATTCCAGTTGGCAGATATGGCCACCAAGCTAGTTGCTTCCCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060513.8 ENSMUST00000120367.8 |
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CDS CAA 90 bp | AAAGCCACTGCTGCAGTACGGATCATCAGCCGGGAAGCAACTAGCTaGGTGGCCATATCTGCCAACTGGAATTGGAGGTACTGGCTTCTG | + |
Preference number: 6 (lower is better) Translates to: KATAAVRIISREATS*VAISANWNWRYWLL Trigger: CAGAAGCCAGTACCTCCAATTCCAGTTGGCAGATATGGCCACCAAGCTAGTTGCTTCCCGGCTGATGATCCGTACTGCAGCAGTGGCTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060513.8 ENSMUST00000120367.8 |
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CDS GCA 72 bp | TGGAGGTACTGGCTTCTGGCCAAAGGTGCTCCAAACTaGTTGCGGACCTTGAGGTGTTCTTGGGTTAGGATA | + |
Preference number: 6 (lower is better) Translates to: WRYWLLAKGAPN*LRTLRCSWVRI Trigger: TATCCTAACCCAAGAACACCTCAAGGTCCGCAAGCAGTTTGGAGCACCTTTGGCCAGAAGCCAGTACCTCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060513.8 ENSMUST00000120367.8 |
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CDS GCA 72 bp | CAACTGGAATTGGAGGTACTGGCTTCTGGCCAAAGGTaGTCCAAACTGCTTGCGGACCTTGAGGTGTTCTTG | + |
Preference number: 6 (lower is better) Translates to: QLELEVLASGQR*SKLLADLEVFL Trigger: CAAGAACACCTCAAGGTCCGCAAGCAGTTTGGAGCACCTTTGGCCAGAAGCCAGTACCTCCAATTCCAGTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060513.8 ENSMUST00000120367.8 |
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CDS CAA 90 bp | TCATTTAGCCCCAAGGAAGCTGTGAACAGGACCAGACATATTCAATaGATCGATGCAGAAGGTGATGCTCCGGTGGTGGGTCTGAGCCAG | + |
Preference number: 6 (lower is better) Translates to: SFSPKEAVNRTRHIQ*IDAEGDAPVVGLSQ Trigger: CTGGCTCAGACCCACCACCGGAGCATCACCTTCTGCATCGATCAATTGAATATGTCTGGTCCTGTTCACAGCTTCCTTGGGGCTAAATGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000128923.8 ENSMUST00000132293.2 |
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CDS CAA 72 bp | CCCAAGGAAGCTGTGAACAGGACCAGACATATTCAATaGATCGATGCAGAAGGTGATGCTCCGGTGGTGGGT | + |
Preference number: 6 (lower is better) Translates to: PKEAVNRTRHIQ*IDAEGDAPVVG Trigger: ACCCACCACCGGAGCATCACCTTCTGCATCGATCAATTGAATATGTCTGGTCCTGTTCACAGCTTCCTTGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000128923.8 ENSMUST00000132293.2 |
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CDS TCA 72 bp | ACCTTGAGGTGTTCTTGGGTTAGGATAACTGAAGCATaGGCGGCTCCCAGAGAGCAGGATGCAACATTGATC | + |
Preference number: 6 (lower is better) Translates to: TLRCSWVRITEA*AAPREQDATLI Trigger: GATCAATGTTGCATCCTGCTCTCTGGGAGCCGCTCATGCTTCAGTTATCCTAACCCAAGAACACCTCAAGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060513.8 ENSMUST00000120367.8 |
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CDS CCA 72 bp | TCACTTCATTGCTACCTTCTAGGATCTGGTGGACCCTaGAGTCCCGCATATACTGTTGAACAGCATAGTCCT | + |
Preference number: 6 (lower is better) Translates to: SLHCYLLGSGGP*SPAYTVEQHSP Trigger: AGGACTATGCTGTTCAACAGTATATGCGGGACTCCAGGGTCCACCAGATCCTAGAAGGTAGCAATGAAGTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060513.8 ENSMUST00000120367.8 |
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CDS TCA 72 bp | ACCATTGAGGATGTAATGATCTCCTTGTTGTTTAGCTaGGGTCAGAAGAGATGCAGCATCACTCCCAGCACC | + |
Preference number: 6 (lower is better) Translates to: TIEDVMISLLFS*GQKRCSITPST Trigger: GGTGCTGGGAGTGATGCTGCATCTCTTCTGACCTCAGCTAAACAACAAGGAGATCATTACATCCTCAATGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120367.8 |