Pregenerated sensors for ACAD12 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000042647Ensembl transcript IDs: ENSMUST00000041252.13, ENSMUST00000111776.6, ENSMUST00000131338.2, ENSMUST00000197916.2
Found 238 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCAGGGCCCTGGCCCACAGAAGACAAATCCAAGAGGATGCAGGCCTaGTGCCTCTGCCCGCCTGTCTCCTCTCACAGACTCCTGCTTATC | + |
|
Preference number: 1 (lower is better) Translates to: PGPWPTEDKSKRMQA*CLCPPVSSHRLLLI Trigger: GATAAGCAGGAGTCTGTGAGAGGAGACAGGCGGGCAGAGGCACCAGGCCTGCATCCTCTTGGATTTGTCTTCTGTGGGCCAGGGCCCTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111776.6 |
||
| 3UTR GCA 90 bp | GGGCCCTGGCCCACAGAAGACAAATCCAAGAGGATGCAGGCCTGGTaGCTCTGCCCGCCTGTCTCCTCTCACAGACTCCTGCTTATCTTC | + |
|
Preference number: 1 (lower is better) Translates to: GPWPTEDKSKRMQAW*LCPPVSSHRLLLIF Trigger: GAAGATAAGCAGGAGTCTGTGAGAGGAGACAGGCGGGCAGAGGCACCAGGCCTGCATCCTCTTGGATTTGTCTTCTGTGGGCCAGGGCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111776.6 |
||
| 3UTR GCA 90 bp | ACAAAGGAGGAGCCTAATGGCCTCTGGAGACATCAGAGTCCAAGGTaGCCAGATTCCTACAGCCCAGAGGAAGGGGCGGGGGTCACAGGT | + |
|
Preference number: 1 (lower is better) Translates to: TKEEPNGLWRHQSPR*PDSYSPEEGAGVTG Trigger: ACCTGTGACCCCCGCCCCTTCCTCTGGGCTGTAGGAATCTGGGCACCTTGGACTCTGATGTCTCCAGAGGCCATTAGGCTCCTCCTTTGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041252.13 |
||
| 3UTR CCA 90 bp | GCTTTCCCACTCGGGTTCTGGATCACAATCTCAGGAGCTGACCCTTaGGGCAGTAAACACTTTCCCTGCCTAGCCTCCTCCCCAGCCCAG | + |
|
Preference number: 1 (lower is better) Translates to: AFPLGFWITISGADP*GSKHFPCLASSPAQ Trigger: CTGGGCTGGGGAGGAGGCTAGGCAGGGAAAGTGTTTACTGCCCCAAGGGTCAGCTCCTGAGATTGTGATCCAGAACCCGAGTGGGAAAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041252.13 |
||
| 3UTR GCA 90 bp | CACATCAGTGGTCACACAGTGGCTTCATCCCAGGGGCATTTGCTGTaGACCACGCCCCCTGCTTTCCTAGAAGCACAAAGGAGGAGCCTA | + |
|
Preference number: 1 (lower is better) Translates to: HISGHTVASSQGHLL*TTPPAFLEAQRRSL Trigger: TAGGCTCCTCCTTTGTGCTTCTAGGAAAGCAGGGGGCGTGGTGCACAGCAAATGCCCCTGGGATGAAGCCACTGTGTGACCACTGATGTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041252.13 |
||
| 3UTR CCA 90 bp | ACCCCAGGAGGCTCAGGTCACAGTGACTGTCGCAGACTGAGCTGCTaGATAGGATGTGAGGACCACACATTGCAGGCCATGCCAAACTCA | + |
|
Preference number: 1 (lower is better) Translates to: TPGGSGHSDCRRLSC*IGCEDHTLQAMPNS Trigger: TGAGTTTGGCATGGCCTGCAATGTGTGGTCCTCACATCCTATCCAGCAGCTCAGTCTGCGACAGTCACTGTGACCTGAGCCTCCTGGGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041252.13 |
||
| 3UTR CCA 90 bp | GCCCCCTGCTTTCCTAGAAGCACAAAGGAGGAGCCTAATGGCCTCTaGAGACATCAGAGTCCAAGGTGCCCAGATTCCTACAGCCCAGAG | + |
|
Preference number: 1 (lower is better) Translates to: APCFPRSTKEEPNGL*RHQSPRCPDSYSPE Trigger: CTCTGGGCTGTAGGAATCTGGGCACCTTGGACTCTGATGTCTCCAGAGGCCATTAGGCTCCTCCTTTGTGCTTCTAGGAAAGCAGGGGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041252.13 |
||
| 3UTR GCA 90 bp | TGCAGGCCTGGTGCCTCTGCCCGCCTGTCTCCTCTCACAGACTCCTaGTTATCTTCTGAGATCAGAAGGGTAAGGCAAGCAGAAACACCT | + |
|
Preference number: 1 (lower is better) Translates to: CRPGASARLSPLTDS*LSSEIRRVRQAETP Trigger: AGGTGTTTCTGCTTGCCTTACCCTTCTGATCTCAGAAGATAAGCAGGAGTCTGTGAGAGGAGACAGGCGGGCAGAGGCACCAGGCCTGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111776.6 |
||
| 3UTR CCA 90 bp | TCTGAATCAGTATTCTGTGACGTGGGCACATCAGTGGTCACACAGTaGCTTCATCCCAGGGGCATTTGCTGTGCACCACGCCCCCTGCTT | + |
|
Preference number: 1 (lower is better) Translates to: SESVFCDVGTSVVTQ*LHPRGICCAPRPLL Trigger: AAGCAGGGGGCGTGGTGCACAGCAAATGCCCCTGGGATGAAGCCACTGTGTGACCACTGATGTGCCCACGTCACAGAATACTGATTCAGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041252.13 |
||
| 3UTR CCA 90 bp | ACAAACTGTGAGCGAAGACTCCTGAAGTTTGAACCCACACCAGCTTaGTCACCCCTGACTGACCCTCCTGCAGATCCTCACTCTGCTGCC | + |
|
Preference number: 1 (lower is better) Translates to: TNCERRLLKFEPTPA*SPLTDPPADPHSAA Trigger: GGCAGCAGAGTGAGGATCTGCAGGAGGGTCAGTCAGGGGTGACCAAGCTGGTGTGGGTTCAAACTTCAGGAGTCTTCGCTCACAGTTTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131338.2 |
||
| 3UTR CCA 90 bp | CACCAGGACCCTCCTCTGATGGCTCTCCCATTGATCACAAGTACATaGCACACACACCCAGCTTTCCCACTCGGGTTCTGGATCACAATC | + |
|
Preference number: 1 (lower is better) Translates to: HQDPPLMALPLITST*HTHPAFPLGFWITI Trigger: GATTGTGATCCAGAACCCGAGTGGGAAAGCTGGGTGTGTGTGCCATGTACTTGTGATCAATGGGAGAGCCATCAGAGGAGGGTCCTGGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041252.13 |
||
| 3UTR TCA 90 bp | ACAGCTACCCAGGCACCCAAATCCCCTTCCTCCACGCCTAAAGCTTaGGCTCAGTCTCTCCAGAAACATCTTCTTGAAGAGACCCCAGGA | + |
|
Preference number: 1 (lower is better) Translates to: TATQAPKSPSSTPKA*AQSLQKHLLEETPG Trigger: TCCTGGGGTCTCTTCAAGAAGATGTTTCTGGAGAGACTGAGCTCAAGCTTTAGGCGTGGAGGAAGGGGATTTGGGTGCCTGGGTAGCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041252.13 |
||
| 3UTR TCA 90 bp | TGCCTCTGCCCGCCTGTCTCCTCTCACAGACTCCTGCTTATCTTCTaGGATCAGAAGGGTAAGGCAAGCAGAAACACCTACAGGCAGTCT | + |
|
Preference number: 1 (lower is better) Translates to: CLCPPVSSHRLLLIF*DQKGKASRNTYRQS Trigger: AGACTGCCTGTAGGTGTTTCTGCTTGCCTTACCCTTCTGATCTCAGAAGATAAGCAGGAGTCTGTGAGAGGAGACAGGCGGGCAGAGGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111776.6 |
||
| 3UTR CCA 90 bp | ACCACAGAGCATCTGAATCAGTATTCTGTGACGTGGGCACATCAGTaGTCACACAGTGGCTTCATCCCAGGGGCATTTGCTGTGCACCAC | + |
|
Preference number: 1 (lower is better) Translates to: TTEHLNQYSVTWAHQ*SHSGFIPGAFAVHH Trigger: GTGGTGCACAGCAAATGCCCCTGGGATGAAGCCACTGTGTGACCACTGATGTGCCCACGTCACAGAATACTGATTCAGATGCTCTGTGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041252.13 |
||
| 3UTR CCA 90 bp | AGCTCAGAGGACAACCAGCAGAGCCAGCTAGTTTTCTCTACCATGTaGGTCCCAAGGAATCAGGCTTGGTGGACATACCCACTGAGCCAT | + |
|
Preference number: 1 (lower is better) Translates to: SSEDNQQSQLVFSTM*VPRNQAWWTYPLSH Trigger: ATGGCTCAGTGGGTATGTCCACCAAGCCTGATTCCTTGGGACCCACATGGTAGAGAAAACTAGCTGGCTCTGCTGGTTGTCCTCTGAGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111776.6 |
||
| 3UTR GCA 90 bp | TGGTTGTGTGTGTTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTaGATATGCCCAAGCATGCGCGAGGAGCTCAGAGGACAACCAGCA | + |
|
Preference number: 1 (lower is better) Translates to: WLCVFCVCVCVCVCV*ICPSMREELRGQPA Trigger: TGCTGGTTGTCCTCTGAGCTCCTCGCGCATGCTTGGGCATATGCACACACACACACACACACACACACACACACAAAACACACACAACCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111776.6 |
||
| 3UTR TCA 90 bp | AGGACCCCAGTATATAAGGCCAGCACTGGGAAAGCCATAGATGCCTaGGTCATGGAGCAGTGGGAAACTTTATCACCCATGTCCTCCATG | + |
|
Preference number: 1 (lower is better) Translates to: RTPVYKASTGKAIDA*VMEQWETLSPMSSM Trigger: CATGGAGGACATGGGTGATAAAGTTTCCCACTGCTCCATGACTCAGGCATCTATGGCTTTCCCAGTGCTGGCCTTATATACTGGGGTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041252.13 |
||
| 3UTR TCA 90 bp | CTACCAGTCCAGGGATGGTGCCACCCAAAATGGGCTCTCCCTGCTTaGTCACTAATTGAGAAAATGTCTTACAGCTGGATCTCATGGAGG | + |
|
Preference number: 1 (lower is better) Translates to: LPVQGWCHPKWALPA*SLIEKMSYSWISWR Trigger: CCTCCATGAGATCCAGCTGTAAGACATTTTCTCAATTAGTGATCAAGCAGGGAGAGCCCATTTTGGGTGGCACCATCCCTGGACTGGTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041252.13 |
||
| 3UTR CCA 90 bp | GAGAAAATGTCTTACAGCTGGATCTCATGGAGGCATTTCCTCACCTaGAGCTCCTTTCTCTGTGATAACTCCAGCTCGTGTCAAGTTGAC | + |
|
Preference number: 1 (lower is better) Translates to: EKMSYSWISWRHFLT*SSFLCDNSSSCQVD Trigger: GTCAACTTGACACGAGCTGGAGTTATCACAGAGAAAGGAGCTCCAGGTGAGGAAATGCCTCCATGAGATCCAGCTGTAAGACATTTTCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041252.13 |
||
| 3UTR GCA 90 bp | TATCTCAGAAGCATACAGAGACATGCCCATCACTTCACACAGATGTaGATATTCCACGTTAGTCAGCCCTGCTCCGTACTTTTTCTCAGG | + |
|
Preference number: 1 (lower is better) Translates to: YLRSIQRHAHHFTQM*IFHVSQPCSVLFLR Trigger: CCTGAGAAAAAGTACGGAGCAGGGCTGACTAACGTGGAATATGCACATCTGTGTGAAGTGATGGGCATGTCTCTGTATGCTTCTGAGATA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000197916.2 |
||
| 3UTR TCA 90 bp | TTGTATATGATGTCAGCATATAGGCATGTTACATTAGGGAAAATCTaGAGAGAACTTTCAAGAGTCAGGTCTCTTCTACCATGTAGGTCC | + |
|
Preference number: 1 (lower is better) Translates to: LYMMSAYRHVTLGKI*RELSRVRSLLPCRS Trigger: GGACCTACATGGTAGAAGAGACCTGACTCTTGAAAGTTCTCTTCAGATTTTCCCTAATGTAACATGCCTATATGCTGACATCATATACAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111776.6 |
||
| 3UTR-3UTR TCA 90 bp | AGGAAGCAGGAGCTGATGCAGGGGCCATGGAAGGATGTTACTGGCCTGCTTCCCCCCATGTCCTCCATGTaGCATAGGTGGGGCAGTGGG | + |
|
Preference number: 2 (lower is better) Translates to: RKQELMQGPWKDVTGLLPPMSSM*HRWGSG Trigger: CCCACTGCCCCACCTATGTCACATGGAGGACATGGG...GGGAAGCAGGCCAGTAACATCCTTCCATGGCCCCTGCATCAGCTCCTGCTTCCT 60% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000041252.13 |
||
| 3UTR CAA 90 bp | CGTGGGCACATCAGTGGTCACACAGTGGCTTCATCCCAGGGGCATTaGCTGTGCACCACGCCCCCTGCTTTCCTAGAAGCACAAAGGAGG | + |
|
Preference number: 2 (lower is better) Translates to: RGHISGHTVASSQGH*LCTTPPAFLEAQRR Trigger: CCTCCTTTGTGCTTCTAGGAAAGCAGGGGGCGTGGTGCACAGCAAATGCCCCTGGGATGAAGCCACTGTGTGACCACTGATGTGCCCACG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041252.13 |
||
| 3UTR CAA 90 bp | GGCTGGTCAGAGAGCCACCAGGACCCTCCTCTGATGGCTCTCCCATaGATCACAAGTACATGGCACACACACCCAGCTTTCCCACTCGGG | + |
|
Preference number: 2 (lower is better) Translates to: GWSESHQDPPLMALP*ITSTWHTHPAFPLG Trigger: CCCGAGTGGGAAAGCTGGGTGTGTGTGCCATGTACTTGTGATCAATGGGAGAGCCATCAGAGGAGGGTCCTGGTGGCTCTCTGACCAGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041252.13 |
||
| 3UTR-3UTR TCA 90 bp | AGGAAGCAGGAGCTGATGCAGGGGCCATGGAAGGATGTTACTGGCCTGCTTCCCAGGCTCAGGTCACAGTaGCTGTCGCAGACTGAGCTG | + |
|
Preference number: 2 (lower is better) Translates to: RKQELMQGPWKDVTGLLPRLRSQ*LSQTEL Trigger: CAGCTCAGTCTGCGACAGTCACTGTGACCTGAGCCT...GGGAAGCAGGCCAGTAACATCCTTCCATGGCCCCTGCATCAGCTCCTGCTTCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041252.13 |
||
| 3UTR-3UTR TCA 90 bp | AGCTCAGAGGACAACCAGCAGAGCCAGCTAGTTTTCTCTACCATGTGGGTCCCACTCCCTTCACACAGGTaGGGGAATCCCCCAGGGCCC | + |
|
Preference number: 2 (lower is better) Translates to: SSEDNQQSQLVFSTMWVPLPSHR*GNPPGP Trigger: GGGCCCTGGGGGATTCCCTCACCTGTGTGAAGGGAG...TGGGACCCACATGGTAGAGAAAACTAGCTGGCTCTGCTGGTTGTCCTCTGAGCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000111776.6 |
||
| 3UTR-3UTR GCA 90 bp | GAGAGCCACCAGGACCCTCCTCTGATGGCTCTCCCATTGATCACAAGTACATGGCAGGGGCATTTGCTGTaGACCACGCCCCCTGCTTTC | + |
|
Preference number: 2 (lower is better) Translates to: ESHQDPPLMALPLITSTWQGHLL*TTPPAF Trigger: GAAAGCAGGGGGCGTGGTGCACAGCAAATGCCCCTG...CCATGTACTTGTGATCAATGGGAGAGCCATCAGAGGAGGGTCCTGGTGGCTCTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041252.13 |
||
| 3UTR-3UTR CCA 90 bp | AGGAAGCAGGAGCTGATGCAGGGGCCATGGAAGGATGTTACTGGCCTGCTTCCCGAGCCTAATGGCCTCTaGAGACATCAGAGTCCAAGG | + |
|
Preference number: 2 (lower is better) Translates to: RKQELMQGPWKDVTGLLPEPNGL*RHQSPR Trigger: CCTTGGACTCTGATGTCTCCAGAGGCCATTAGGCTC...GGGAAGCAGGCCAGTAACATCCTTCCATGGCCCCTGCATCAGCTCCTGCTTCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041252.13 |
||
| 3UTR CAA 90 bp | CCATCCCGAGGGAGGGCACATTACTCTTCAAATCTCAGCGGCACCTaGCCTGTCACCCTCCATGCCCCAACACAACCAATAAGGCAGATG | + |
|
Preference number: 2 (lower is better) Translates to: PSRGRAHYSSNLSGT*PVTLHAPTQPIRQM Trigger: CATCTGCCTTATTGGTTGTGTTGGGGCATGGAGGGTGACAGGCAAGGTGCCGCTGAGATTTGAAGAGTAATGTGCCCTCCCTCGGGATGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041252.13 |
||
| 3UTR-3UTR TCA 90 bp | AGGAAGCAGGAGCTGATGCAGGGGCCATGGAAGGATGTTACTGGCCTGCTTCCCACAGTACAGCAAGCATaGGTGTGTACGTGTGTGCGA | + |
|
Preference number: 2 (lower is better) Translates to: RKQELMQGPWKDVTGLLPTVQQA*VCTCVR Trigger: TCGCACACACGTACACACTCATGCTTGCTGTACTGT...GGGAAGCAGGCCAGTAACATCCTTCCATGGCCCCTGCATCAGCTCCTGCTTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041252.13 |
||
| 3UTR-3UTR CCA 90 bp | TCCCCTGGCTTGCTCAGTTTTCCTTCTTATAGAACCCAGGACTACCAGTCCAGGGCTGCCATTGAGGGCTaGGGGCCTTCGTGGATCTTC | + |
|
Preference number: 2 (lower is better) Translates to: SPGLLSFPSYRTQDYQSRAAIEG*GPSWIF Trigger: GAAGATCCACGAAGGCCCCCAGCCCTCAATGGCAGC...CCTGGACTGGTAGTCCTGGGTTCTATAAGAAGGAAAACTGAGCAAGCCAGGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000041252.13 |
||
| 3UTR CAA 90 bp | CCTCCACGCCTAAAGCTTGAGCTCAGTCTCTCCAGAAACATCTTCTaGAAGAGACCCCAGGAGGCTCAGGTCACAGTGACTGTCGCAGAC | + |
|
Preference number: 2 (lower is better) Translates to: PPRLKLELSLSRNIF*KRPQEAQVTVTVAD Trigger: GTCTGCGACAGTCACTGTGACCTGAGCCTCCTGGGGTCTCTTCAAGAAGATGTTTCTGGAGAGACTGAGCTCAAGCTTTAGGCGTGGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041252.13 |
||
| 3UTR-3UTR TCA 90 bp | GTCAGAGAGCCACCAGGACCCTCCTCTGATGGCTCTCCCATTGATCACAAGTACGTGCCCATGCTTCTCTaGGAAGTCAGACCTTGCCTA | + |
|
Preference number: 2 (lower is better) Translates to: VREPPGPSSDGSPIDHKYVPMLL*EVRPCL Trigger: TAGGCAAGGTCTGACTTCTCAGAGAAGCATGGGCAC...GTACTTGTGATCAATGGGAGAGCCATCAGAGGAGGGTCCTGGTGGCTCTCTGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041252.13 |
||
| 3UTR-3UTR CCA 90 bp | CCCCCAGGGCCCTGGCCCACAGAAGACAAATCCAAGAGGATGCAGGCCTGGTGCATACCTTCAGATCCTTaGCATGTGGCAAATTCTGAA | + |
|
Preference number: 2 (lower is better) Translates to: PPGPWPTEDKSKRMQAWCIPSDP*HVANSE Trigger: TTCAGAATTTGCCACATGCCAAGGATCTGAAGGTAT...GCACCAGGCCTGCATCCTCTTGGATTTGTCTTCTGTGGGCCAGGGCCCTGGGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111776.6 |
||
| 3UTR-3UTR GCA 90 bp | TGTGTGTGTGTGCATATGCCCAAGCATGCGCGAGGAGCTCAGAGGACAACCAGCTCTGCTGGGCAGCCATaGTCCTTAGGAAATGAAAGT | + |
|
Preference number: 2 (lower is better) Translates to: CVCVHMPKHARGAQRTTSSAGQP*SLGNES Trigger: ACTTTCATTTCCTAAGGAGCATGGCTGCCCAGCAGA...GCTGGTTGTCCTCTGAGCTCCTCGCGCATGCTTGGGCATATGCACACACACACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111776.6 |
||
| 3UTR-3UTR GCA 90 bp | TGTGTGCATATGCCCAAGCATGCGCGAGGAGCTCAGAGGACAACCAGCAGAGCCTTAGATGAGAAATGGTaGATCAGTCACCCGGAGATG | + |
|
Preference number: 2 (lower is better) Translates to: CVHMPKHARGAQRTTSRALDEKW*ISHPEM Trigger: CATCTCCGGGTGACTGATGCACCATTTCTCATCTAA...GGCTCTGCTGGTTGTCCTCTGAGCTCCTCGCGCATGCTTGGGCATATGCACACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111776.6 |
||
| 3UTR-3UTR TCA 90 bp | CCTTGTTTTGAAGAGCAATTAAATTGGTTATTGCAGCCGGGTCTGGTGGCGCACTTGGTCACCCCTGACTaGCCCTCCTGCAGATCCTCA | + |
|
Preference number: 2 (lower is better) Translates to: PCFEEQLNWLLQPGLVAHLVTPD*PSCRSS Trigger: TGAGGATCTGCAGGAGGGTCAGTCAGGGGTGACCAA...GTGCGCCACCAGACCCGGCTGCAATAACCAATTTAATTGCTCTTCAAAACAAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131338.2 |
||
| 3UTR-3UTR GCA 90 bp | GGTTTATTCGGCTTACACTTCCACATTGCTGTTCATCACCAAGGAAGTCAGGACATCTCAGCGGCACCTTaGCTGTCACCCTCCATGCCC | + |
|
Preference number: 2 (lower is better) Translates to: GLFGLHFHIAVHHQGSQDISAAP*LSPSMP Trigger: GGGCATGGAGGGTGACAGGCAAGGTGCCGCTGAGAT...GTCCTGACTTCCTTGGTGATGAACAGCAATGTGGAAGTGTAAGCCGAATAAACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041252.13 |
||
| 3UTR-3UTR GCA 90 bp | GAGTCCCTAGCCTTTAAGGGGCTCATGGCCAATGACTTCTATTTGAGACAGTGTATGCACAGGGTCAGTTaGTGTGACCCCAGGGGCACA | + |
|
Preference number: 2 (lower is better) Translates to: ESLAFKGLMANDFYLRQCMHRVS*CDPRGT Trigger: TGTGCCCCTGGGGTCACAGCAACTGACCCTGTGCAT...ACACTGTCTCAAATAGAAGTCATTGGCCATGAGCCCCTTAAAGGCTAGGGACTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000131338.2 |
||
| 3UTR-3UTR CCA 90 bp | GAGACAGGGTTTCTCTGTGTAGTTGAACTCAGAGACCTACCTAAATCTGCCTCCAATCCCCCAGGGCCCTaGCCCACAGAAGACAAATCC | + |
|
Preference number: 2 (lower is better) Translates to: ETGFLCVVELRDLPKSASNPPGP*PTEDKS Trigger: GGATTTGTCTTCTGTGGGCCAGGGCCCTGGGGGATT...GGAGGCAGATTTAGGTAGGTCTCTGAGTTCAACTACACAGAGAAACCCTGTCTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111776.6 |
||
| 3UTR-3UTR TCA 90 bp | AGCTCAGAGGACAACCAGCAGAGCCAGCTAGTTTTCTCTACCATGTGGGTCCCACTCCTGCTTATCTTCTaGGATCAGAAGGGTAAGGCA | + |
|
Preference number: 2 (lower is better) Translates to: SSEDNQQSQLVFSTMWVPLLLIF*DQKGKA Trigger: TGCCTTACCCTTCTGATCTCAGAAGATAAGCAGGAG...TGGGACCCACATGGTAGAGAAAACTAGCTGGCTCTGCTGGTTGTCCTCTGAGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111776.6 |
||
| 3UTR-3UTR GCA 90 bp | CCTGGCTTGCTCAGTTTTCCTTCTTATAGAACCCAGGACTACCAGTCCAGGGATGCCTGTCACCCTCCATaGCCCAACACAACCAATAAG | + |
|
Preference number: 2 (lower is better) Translates to: PGLLSFPSYRTQDYQSRDACHPP*PNTTNK Trigger: CTTATTGGTTGTGTTGGGGCATGGAGGGTGACAGGC...ATCCCTGGACTGGTAGTCCTGGGTTCTATAAGAAGGAAAACTGAGCAAGCCAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041252.13 |
||
| 3UTR-3UTR GCA 90 bp | TTCTTTTTGGAGACAGGGTTTCTCTGTGTAGTTGAACTCAGAGACCTACCTAAACAGGCCTGGTGCCTCTaGCCGCCTGTCTCCTCTCAC | + |
|
Preference number: 2 (lower is better) Translates to: FFLETGFLCVVELRDLPKQAWCL*PPVSSH Trigger: GTGAGAGGAGACAGGCGGGCAGAGGCACCAGGCCTG...TTTAGGTAGGTCTCTGAGTTCAACTACACAGAGAAACCCTGTCTCCAAAAAGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111776.6 |
||
| 3UTR-3UTR CCA 90 bp | CCTTGTTTTGAAGAGCAATTAAATTGGTTATTGCAGCCGGGTCTGGTGGCGCACAGACCAGGCTGGCCCTaGTTTCTCAGAGAGCTTCCT | + |
|
Preference number: 2 (lower is better) Translates to: PCFEEQLNWLLQPGLVAHRPGWP*FLRELP Trigger: AGGAAGCTCTCTGAGAAACCAGGGCCAGCCTGGTCT...GTGCGCCACCAGACCCGGCTGCAATAACCAATTTAATTGCTCTTCAAAACAAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131338.2 |
||
| 3UTR-3UTR TCA 90 bp | GGTTTATTCGGCTTACACTTCCACATTGCTGTTCATCACCAAGGAAGTCAGGACGCTTGCACTCAGCCTTaGAATAGCTGGTCTGAGACA | + |
|
Preference number: 2 (lower is better) Translates to: GLFGLHFHIAVHHQGSQDACTQP*NSWSET Trigger: TGTCTCAGACCAGCTATTTCAAGGCTGAGTGCAAGC...GTCCTGACTTCCTTGGTGATGAACAGCAATGTGGAAGTGTAAGCCGAATAAACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041252.13 |
||
| 3UTR-3UTR TCA 90 bp | GAGTCCCTAGCCTTTAAGGGGCTCATGGCCAATGACTTCTATTTGAGACAGTGTCATGCCTGGACATATTaGCCAAGGAAGCTGTTATGC | + |
|
Preference number: 2 (lower is better) Translates to: ESLAFKGLMANDFYLRQCHAWTY*PRKLLC Trigger: GCATAACAGCTTCCTTGGTCAATATGTCCAGGCATG...ACACTGTCTCAAATAGAAGTCATTGGCCATGAGCCCCTTAAAGGCTAGGGACTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131338.2 |
||
| 3UTR CAA 90 bp | GTAGACCAGGCTGGCCCTGGTTTCTCAGAGAGCTTCCTGTATTCTTaGATTTACACGCAGGGTTTACTCATCACCAGAATAAGTTTCCAC | + |
|
Preference number: 2 (lower is better) Translates to: VDQAGPGFSESFLYS*IYTQGLLITRISFH Trigger: GTGGAAACTTATTCTGGTGATGAGTAAACCCTGCGTGTAAATCAAAGAATACAGGAAGCTCTCTGAGAAACCAGGGCCAGCCTGGTCTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131338.2 |
||
| 3UTR CAA 90 bp | AAAAACCTGCCTGTTCCTTGTTTTGAAGAGCAATTAAATTGGTTATaGCAGCCGGGTCTGGTGGCGCACACCTTTCACACCTTTGATCTA | + |
|
Preference number: 2 (lower is better) Translates to: KNLPVPCFEEQLNWL*QPGLVAHTFHTFDL Trigger: TAGATCAAAGGTGTGAAAGGTGTGCGCCACCAGACCCGGCTGCAATAACCAATTTAATTGCTCTTCAAAACAAGGAACAGGCAGGTTTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000131338.2 |
||
| 3UTR-3UTR GCA 90 bp | TTCTTTTTGGAGACAGGGTTTCTCTGTGTAGTTGAACTCAGAGACCTACCTAAACAGGGCTCCCCAAAGTaGTGTCAGGTATTAGAACCA | + |
|
Preference number: 2 (lower is better) Translates to: FFLETGFLCVVELRDLPKQGSPK*CQVLEP Trigger: TGGTTCTAATACCTGACAGCACTTTGGGGAGCCCTG...TTTAGGTAGGTCTCTGAGTTCAACTACACAGAGAAACCCTGTCTCCAAAAAGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111776.6 |
||
| 3UTR-3UTR CCA 90 bp | CTCACTGGGCTTGTGGCTAAAATAGGATGCAGGACAAAAGCCTTAGATGAGAAACAGATCCTTGGCATGTaGCAAATTCTGAACAGAACC | + |
|
Preference number: 2 (lower is better) Translates to: LTGLVAKIGCRTKALDEKQILGM*QILNRT Trigger: GGTTCTGTTCAGAATTTGCCACATGCCAAGGATCTG...TTTCTCATCTAAGGCTTTTGTCCTGCATCCTATTTTAGCCACAAGCCCAGTGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111776.6 |
||
| 3UTR-3UTR TCA 90 bp | GGTGATGCTGTCCCGGATTTATATCCCAGGCAGATTATAAGCCTTATACAAGTATGTCATACTCTAGTCTaGAAGTTTCAGCAATCCTCC | + |
|
Preference number: 2 (lower is better) Translates to: GDAVPDLYPRQIISLIQVCHTLV*KFQQSS Trigger: GGAGGATTGCTGAAACTTTCAGACTAGAGTATGACA...TACTTGTATAAGGCTTATAATCTGCCTGGGATATAAATCCGGGACAGCATCACC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131338.2 |
||
| 3UTR CAA 90 bp | ATCTGCCTCCCAAGTTCTGGTATTAAAGGCATGTGCCATCACTACTaGTATATGATGTCAGCATATAGGCATGTTACATTAGGGAAAATC | + |
|
Preference number: 2 (lower is better) Translates to: ICLPSSGIKGMCHHY*YMMSAYRHVTLGKI Trigger: GATTTTCCCTAATGTAACATGCCTATATGCTGACATCATATACAAGTAGTGATGGCACATGCCTTTAATACCAGAACTTGGGAGGCAGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111776.6 |
||
| 3UTR-3UTR TCA 90 bp | AAGAACGATTGGCCACTTAACCTCCTTCTTTACATCATCAAAATAGTAATGGTGGCTTCCTGTATTCTTTaGTTTACACGCAGGGTTTAC | + |
|
Preference number: 2 (lower is better) Translates to: KNDWPLNLLLYIIKIVMVASCIL*FTRRVY Trigger: GTAAACCCTGCGTGTAAATCAAAGAATACAGGAAGC...CACCATTACTATTTTGATGATGTAAAGAAGGAGGTTAAGTGGCCAATCGTTCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131338.2 |
||
| 3UTR GCA 72 bp | CAGGGCCCTGGCCCACAGAAGACAAATCCAAGAGGATaGAGGCCTGGTGCCTCTGCCCGCCTGTCTCCTCTC | + |
|
Preference number: 3 (lower is better) Translates to: QGPGPQKTNPRG*RPGASARLSPL Trigger: GAGAGGAGACAGGCGGGCAGAGGCACCAGGCCTGCATCCTCTTGGATTTGTCTTCTGTGGGCCAGGGCCCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111776.6 |
||
| 3UTR GCA 72 bp | GAGCCTAATGGCCTCTGGAGACATCAGAGTCCAAGGTaGCCAGATTCCTACAGCCCAGAGGAAGGGGCGGGG | + |
|
Preference number: 3 (lower is better) Translates to: EPNGLWRHQSPR*PDSYSPEEGAG Trigger: CCCCGCCCCTTCCTCTGGGCTGTAGGAATCTGGGCACCTTGGACTCTGATGTCTCCAGAGGCCATTAGGCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041252.13 |
||
| 3UTR GCA 72 bp | CACCAGAGAAACCTACTTAGCAGCCTGTGGCCACTGTaGACTCTGCAATCCATGGCCCAGGCTGCAGCAGCG | + |
|
Preference number: 3 (lower is better) Translates to: HQRNLLSSLWPL*TLQSMAQAAAA Trigger: CGCTGCTGCAGCCTGGGCCATGGATTGCAGAGTGCACAGTGGCCACAGGCTGCTAAGTAGGTTTCTCTGGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041252.13 |
||
| 3UTR CCA 72 bp | TTGCCAGTATGCAGGGGCTATGCTGCCATTGAGGGCTaGGGGCCTTCGTGGATCTTCCTGCAAGTGTGGTGG | + |
|
Preference number: 3 (lower is better) Translates to: LPVCRGYAAIEG*GPSWIFLQVWW Trigger: CCACCACACTTGCAGGAAGATCCACGAAGGCCCCCAGCCCTCAATGGCAGCATAGCCCCTGCATACTGGCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041252.13 |
||
| 3UTR CCA 72 bp | TGGCCCACAGAAGACAAATCCAAGAGGATGCAGGCCTaGTGCCTCTGCCCGCCTGTCTCCTCTCACAGACTC | + |
|
Preference number: 3 (lower is better) Translates to: WPTEDKSKRMQA*CLCPPVSSHRL Trigger: GAGTCTGTGAGAGGAGACAGGCGGGCAGAGGCACCAGGCCTGCATCCTCTTGGATTTGTCTTCTGTGGGCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111776.6 |
||
| 3UTR-3UTR CAA 90 bp | TCCTCCCCAGCCCAGGGAGGGTCTTTTACATCCAAACTGGGAGTTAGACGGATGTCATCCCAGGGGCATTaGCTGTGCACCACGCCCCCT | + |
|
Preference number: 3 (lower is better) Translates to: SSPAQGGSFTSKLGVRRMSSQGH*LCTTPP Trigger: AGGGGGCGTGGTGCACAGCAAATGCCCCTGGGATGA...CATCCGTCTAACTCCCAGTTTGGATGTAAAAGACCCTCCCTGGGCTGGGGAGGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000041252.13 |
||
| 3UTR GCA 72 bp | GGTCACACAGTGGCTTCATCCCAGGGGCATTTGCTGTaGACCACGCCCCCTGCTTTCCTAGAAGCACAAAGG | + |
|
Preference number: 3 (lower is better) Translates to: GHTVASSQGHLL*TTPPAFLEAQR Trigger: CCTTTGTGCTTCTAGGAAAGCAGGGGGCGTGGTGCACAGCAAATGCCCCTGGGATGAAGCCACTGTGTGACC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041252.13 |
||
| 3UTR CCA 72 bp | GGACCAGCACACCAGAGAAACCTACTTAGCAGCCTGTaGCCACTGTGCACTCTGCAATCCATGGCCCAGGCT | + |
|
Preference number: 3 (lower is better) Translates to: GPAHQRNLLSSL*PLCTLQSMAQA Trigger: AGCCTGGGCCATGGATTGCAGAGTGCACAGTGGCCACAGGCTGCTAAGTAGGTTTCTCTGGTGTGCTGGTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041252.13 |
||
| 3UTR GCA 72 bp | GAAACCTACTTAGCAGCCTGTGGCCACTGTGCACTCTaGAATCCATGGCCCAGGCTGCAGCAGCGGGATAAT | + |
|
Preference number: 3 (lower is better) Translates to: ETYLAACGHCAL*NPWPRLQQRDN Trigger: ATTATCCCGCTGCTGCAGCCTGGGCCATGGATTGCAGAGTGCACAGTGGCCACAGGCTGCTAAGTAGGTTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041252.13 |
||
| 3UTR CCA 72 bp | GGCTCAGGTCACAGTGACTGTCGCAGACTGAGCTGCTaGATAGGATGTGAGGACCACACATTGCAGGCCATG | + |
|
Preference number: 3 (lower is better) Translates to: GSGHSDCRRLSC*IGCEDHTLQAM Trigger: CATGGCCTGCAATGTGTGGTCCTCACATCCTATCCAGCAGCTCAGTCTGCGACAGTCACTGTGACCTGAGCC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041252.13 |
||
| 3UTR CCA 72 bp | GTATTCTGTGACGTGGGCACATCAGTGGTCACACAGTaGCTTCATCCCAGGGGCATTTGCTGTGCACCACGC | + |
|
Preference number: 3 (lower is better) Translates to: VFCDVGTSVVTQ*LHPRGICCAPR Trigger: GCGTGGTGCACAGCAAATGCCCCTGGGATGAAGCCACTGTGTGACCACTGATGTGCCCACGTCACAGAATAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041252.13 |
||
| 3UTR CCA 72 bp | CTCGGGTTCTGGATCACAATCTCAGGAGCTGACCCTTaGGGCAGTAAACACTTTCCCTGCCTAGCCTCCTCC | + |
|
Preference number: 3 (lower is better) Translates to: LGFWITISGADP*GSKHFPCLASS Trigger: GGAGGAGGCTAGGCAGGGAAAGTGTTTACTGCCCCAAGGGTCAGCTCCTGAGATTGTGATCCAGAACCCGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041252.13 |
||
| 3UTR CCA 72 bp | GAGCGAAGACTCCTGAAGTTTGAACCCACACCAGCTTaGTCACCCCTGACTGACCCTCCTGCAGATCCTCAC | + |
|
Preference number: 3 (lower is better) Translates to: ERRLLKFEPTPA*SPLTDPPADPH Trigger: GTGAGGATCTGCAGGAGGGTCAGTCAGGGGTGACCAAGCTGGTGTGGGTTCAAACTTCAGGAGTCTTCGCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131338.2 |
||
| 3UTR TCA 72 bp | AGCCCAGAGGAAGGGGCGGGGGTCACAGGTCAAATCTaGAGAACTCAAGAACAGCTACCCAGGCACCCAAAT | + |
|
Preference number: 3 (lower is better) Translates to: SPEEGAGVTGQI*RTQEQLPRHPN Trigger: ATTTGGGTGCCTGGGTAGCTGTTCTTGAGTTCTTCAGATTTGACCTGTGACCCCCGCCCCTTCCTCTGGGCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041252.13 |
||
| 3UTR GCA 72 bp | GGTGCCTCTGCCCGCCTGTCTCCTCTCACAGACTCCTaGTTATCTTCTGAGATCAGAAGGGTAAGGCAAGCA | + |
|
Preference number: 3 (lower is better) Translates to: GASARLSPLTDS*LSSEIRRVRQA Trigger: TGCTTGCCTTACCCTTCTGATCTCAGAAGATAAGCAGGAGTCTGTGAGAGGAGACAGGCGGGCAGAGGCACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111776.6 |
||
| 3UTR CCA 72 bp | CCTCCTCTGATGGCTCTCCCATTGATCACAAGTACATaGCACACACACCCAGCTTTCCCACTCGGGTTCTGG | + |
|
Preference number: 3 (lower is better) Translates to: PPLMALPLITST*HTHPAFPLGFW Trigger: CCAGAACCCGAGTGGGAAAGCTGGGTGTGTGTGCCATGTACTTGTGATCAATGGGAGAGCCATCAGAGGAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041252.13 |
||
| 3UTR CCA 72 bp | GGAGATGGGCAGAAGTGTGGGTGTAAACGTTGTCAGTaGAGAGGTCCCTCCCTTCACACAGGTGAGGGAATC | + |
|
Preference number: 3 (lower is better) Translates to: GDGQKCGCKRCQ*RGPSLHTGEGI Trigger: GATTCCCTCACCTGTGTGAAGGGAGGGACCTCTCCACTGACAACGTTTACACCCACACTTCTGCCCATCTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111776.6 |
||
| 3UTR-3UTR CAA 90 bp | GTGACGTGGGCACATCAGTGGTCACACAGTGGCTTCATCCCAGGGGCATTTGCTTCCAGAAACATCTTCTaGAAGAGACCCCAGGAGGCT | + |
|
Preference number: 3 (lower is better) Translates to: VTWAHQWSHSGFIPGAFASRNIF*KRPQEA Trigger: AGCCTCCTGGGGTCTCTTCAAGAAGATGTTTCTGGA...AGCAAATGCCCCTGGGATGAAGCCACTGTGTGACCACTGATGTGCCCACGTCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041252.13 |
||
| 3UTR-3UTR CAA 90 bp | GTCAGAGAGCCACCAGGACCCTCCTCTGATGGCTCTCCCATTGATCACAAGTACGATGACATGGCTCCTTaGGGGACGTTTCTGAACTGC | + |
|
Preference number: 3 (lower is better) Translates to: VREPPGPSSDGSPIDHKYDDMAP*GTFLNC Trigger: GCAGTTCAGAAACGTCCCCAAAGGAGCCATGTCATC...GTACTTGTGATCAATGGGAGAGCCATCAGAGGAGGGTCCTGGTGGCTCTCTGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041252.13 |
||
| 3UTR GCA 72 bp | TTCAAATCTCAGCGGCACCTTGCCTGTCACCCTCCATaGCCCAACACAACCAATAAGGCAGATGGCAGATCC | + |
|
Preference number: 3 (lower is better) Translates to: FKSQRHLACHPP*PNTTNKADGRS Trigger: GGATCTGCCATCTGCCTTATTGGTTGTGTTGGGGCATGGAGGGTGACAGGCAAGGTGCCGCTGAGATTTGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041252.13 |
||
| 3UTR TCA 72 bp | GACATGGCTCCTTTGGGGACGTTTCTGAACTGCTGCTaGGGTGTGAAGGAGACCTGTGGGATTATCATAGCC | + |
|
Preference number: 3 (lower is better) Translates to: DMAPLGTFLNCC*GVKETCGIIIA Trigger: GGCTATGATAATCCCACAGGTCTCCTTCACACCTCAGCAGCAGTTCAGAAACGTCCCCAAAGGAGCCATGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041252.13 |
||
| 3UTR TCA 72 bp | AAGGAACTCCTCCTAGATTGCCTGGACAGGACCTCTTaGGGTGATGCTGTCCCGGATTTATATCCCAGGCAG | + |
|
Preference number: 3 (lower is better) Translates to: KELLLDCLDRTS*GDAVPDLYPRQ Trigger: CTGCCTGGGATATAAATCCGGGACAGCATCACCTCAAGAGGTCCTGTCCAGGCAATCTAGGAGGAGTTCCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131338.2 |
||
| 3UTR GCA 72 bp | GTGTTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTaGATATGCCCAAGCATGCGCGAGGAGCTCAGAGGA | + |
|
Preference number: 3 (lower is better) Translates to: VFCVCVCVCVCV*ICPSMREELRG Trigger: TCCTCTGAGCTCCTCGCGCATGCTTGGGCATATGCACACACACACACACACACACACACACACACAAAACAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111776.6 |
||
| 3UTR GCA 72 bp | ATATTGACCAAGGAAGCTGTTATGCACAGGGTCAGTTaGTGTGACCCCAGGGGCACAAACAGGCCATGCATG | + |
|
Preference number: 3 (lower is better) Translates to: ILTKEAVMHRVS*CDPRGTNRPCM Trigger: CATGCATGGCCTGTTTGTGCCCCTGGGGTCACAGCAACTGACCCTGTGCATAACAGCTTCCTTGGTCAATAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131338.2 |
||
| 3UTR CCA 72 bp | GTTTTCTCTACCATGTGGGTCCCAAGGAATCAGGCTTaGTGGACATACCCACTGAGCCATCTCACTGGGCTT | + |
|
Preference number: 3 (lower is better) Translates to: VFSTMWVPRNQA*WTYPLSHLTGL Trigger: AAGCCCAGTGAGATGGCTCAGTGGGTATGTCCACCAAGCCTGATTCCTTGGGACCCACATGGTAGAGAAAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111776.6 |
||
| 3UTR CCA 72 bp | GACAACCAGCAGAGCCAGCTAGTTTTCTCTACCATGTaGGTCCCAAGGAATCAGGCTTGGTGGACATACCCA | + |
|
Preference number: 3 (lower is better) Translates to: DNQQSQLVFSTM*VPRNQAWWTYP Trigger: TGGGTATGTCCACCAAGCCTGATTCCTTGGGACCCACATGGTAGAGAAAACTAGCTGGCTCTGCTGGTTGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111776.6 |
||
| 3UTR-3UTR CAA 90 bp | CCTGGCTTGCTCAGTTTTCCTTCTTATAGAACCCAGGACTACCAGTCCAGGGATTCGGGTTGCTGGAATTaGCCAGTATGCAGGGGCTAT | + |
|
Preference number: 3 (lower is better) Translates to: PGLLSFPSYRTQDYQSRDSGCWN*PVCRGY Trigger: ATAGCCCCTGCATACTGGCAAATTCCAGCAACCCGA...ATCCCTGGACTGGTAGTCCTGGGTTCTATAAGAAGGAAAACTGAGCAAGCCAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041252.13 |
||
| 3UTR TCA 72 bp | CCGCCTGTCTCCTCTCACAGACTCCTGCTTATCTTCTaGGATCAGAAGGGTAAGGCAAGCAGAAACACCTAC | + |
|
Preference number: 3 (lower is better) Translates to: PPVSSHRLLLIF*DQKGKASRNTY Trigger: GTAGGTGTTTCTGCTTGCCTTACCCTTCTGATCTCAGAAGATAAGCAGGAGTCTGTGAGAGGAGACAGGCGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111776.6 |
||
| 3UTR GCA 72 bp | CCATGGAAGGATGTTACTGGCCTGCTTCCCCTGGCTTaGTCAGTTTTCCTTCTTATAGAACCCAGGACTACC | + |
|
Preference number: 3 (lower is better) Translates to: PWKDVTGLLPLA*SVFLLIEPRTT Trigger: GGTAGTCCTGGGTTCTATAAGAAGGAAAACTGAGCAAGCCAGGGGAAGCAGGCCAGTAACATCCTTCCATGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041252.13 |
||
| 3UTR GCA 72 bp | GTGGCAAATTCTGAACAGAACCAGGGCTCCCCAAAGTaGTGTCAGGTATTAGAACCACACTCAGGGAGACTG | + |
|
Preference number: 3 (lower is better) Translates to: VANSEQNQGSPK*CQVLEPHSGRL Trigger: CAGTCTCCCTGAGTGTGGTTCTAATACCTGACAGCACTTTGGGGAGCCCTGGTTCTGTTCAGAATTTGCCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111776.6 |
||
| 3UTR CCA 72 bp | TTTCCTAGAAGCACAAAGGAGGAGCCTAATGGCCTCTaGAGACATCAGAGTCCAAGGTGCCCAGATTCCTAC | + |
|
Preference number: 3 (lower is better) Translates to: FPRSTKEEPNGL*RHQSPRCPDSY Trigger: GTAGGAATCTGGGCACCTTGGACTCTGATGTCTCCAGAGGCCATTAGGCTCCTCCTTTGTGCTTCTAGGAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041252.13 |
||
| 3UTR CCA 72 bp | CATCTGAATCAGTATTCTGTGACGTGGGCACATCAGTaGTCACACAGTGGCTTCATCCCAGGGGCATTTGCT | + |
|
Preference number: 3 (lower is better) Translates to: HLNQYSVTWAHQ*SHSGFIPGAFA Trigger: AGCAAATGCCCCTGGGATGAAGCCACTGTGTGACCACTGATGTGCCCACGTCACAGAATACTGATTCAGATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041252.13 |
||
| 3UTR CCA 72 bp | AGTCTGGACTGGGCCTCATCAATACCTTCAGATCCTTaGCATGTGGCAAATTCTGAACAGAACCAGGGCTCC | + |
|
Preference number: 3 (lower is better) Translates to: SLDWASSIPSDP*HVANSEQNQGS Trigger: GGAGCCCTGGTTCTGTTCAGAATTTGCCACATGCCAAGGATCTGAAGGTATTGATGAGGCCCAGTCCAGACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111776.6 |
||
| 3UTR CCA 72 bp | GGGCAGCCATGCTCCTTAGGAAATGAAAGTCTGGACTaGGCCTCATCAATACCTTCAGATCCTTGGCATGTG | + |
|
Preference number: 3 (lower is better) Translates to: GQPCSLGNESLD*ASSIPSDPWHV Trigger: CACATGCCAAGGATCTGAAGGTATTGATGAGGCCCAGTCCAGACTTTCATTTCCTAAGGAGCATGGCTGCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111776.6 |
||
| 3UTR TCA 72 bp | GAGCAGTGGGAAACTTTATCACCCATGTCCTCCATGTaGCATAGGTGGGGCAGTGGGTATCTTTATCACCCA | + |
|
Preference number: 3 (lower is better) Translates to: EQWETLSPMSSM*HRWGSGYLYHP Trigger: TGGGTGATAAAGATACCCACTGCCCCACCTATGTCACATGGAGGACATGGGTGATAAAGTTTCCCACTGCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041252.13 |
||
| 3UTR TCA 72 bp | GCTCAGTGGTTAAGACTGGGTGCTTGCACTCAGCCTTaGAATAGCTGGTCTGAGACATTCTTAGGGCCACAT | + |
|
Preference number: 3 (lower is better) Translates to: AQWLRLGACTQP*NSWSETFLGPH Trigger: ATGTGGCCCTAAGAATGTCTCAGACCAGCTATTTCAAGGCTGAGTGCAAGCACCCAGTCTTAACCACTGAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041252.13 |
||
| 3UTR TCA 72 bp | ACTCCTCCTAGATTGCCTGGACAGGACCTCTTGAGGTaGTGCTGTCCCGGATTTATATCCCAGGCAGATTAT | + |
|
Preference number: 3 (lower is better) Translates to: TPPRLPGQDLLR*CCPGFISQADY Trigger: ATAATCTGCCTGGGATATAAATCCGGGACAGCATCACCTCAAGAGGTCCTGTCCAGGCAATCTAGGAGGAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131338.2 |
||
| 3UTR CCA 72 bp | ACTGGGCCTCATCAATACCTTCAGATCCTTGGCATGTaGCAAATTCTGAACAGAACCAGGGCTCCCCAAAGT | + |
|
Preference number: 3 (lower is better) Translates to: TGPHQYLQILGM*QILNRTRAPQS Trigger: ACTTTGGGGAGCCCTGGTTCTGTTCAGAATTTGCCACATGCCAAGGATCTGAAGGTATTGATGAGGCCCAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111776.6 |
||
| 3UTR-3UTR CAA 90 bp | GGTTTATTCGGCTTACACTTCCACATTGCTGTTCATCACCAAGGAAGTCAGGACTGTGAGGACCACACATaGCAGGCCATGCCAAACTCA | + |
|
Preference number: 3 (lower is better) Translates to: GLFGLHFHIAVHHQGSQDCEDHT*QAMPNS Trigger: TGAGTTTGGCATGGCCTGCAATGTGTGGTCCTCACA...GTCCTGACTTCCTTGGTGATGAACAGCAATGTGGAAGTGTAAGCCGAATAAACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041252.13 |
||
| 3UTR TCA 72 bp | ATCAATACCTTCAGATCCTTGGCATGTGGCAAATTCTaGACAGAACCAGGGCTCCCCAAAGTGCTGTCAGGT | + |
|
Preference number: 3 (lower is better) Translates to: INTFRSLACGKF*TEPGLPKVLSG Trigger: ACCTGACAGCACTTTGGGGAGCCCTGGTTCTGTTCAGAATTTGCCACATGCCAAGGATCTGAAGGTATTGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111776.6 |
||
| 3UTR GCA 72 bp | TTCACACAGATGTGCATATTCCACGTTAGTCAGCCCTaGTCCGTACTTTTTCTCAGGATCAGTCTCCAAGGG | + |
|
Preference number: 3 (lower is better) Translates to: FTQMCIFHVSQP*SVLFLRISLQG Trigger: CCCTTGGAGACTGATCCTGAGAAAAAGTACGGAGCAGGGCTGACTAACGTGGAATATGCACATCTGTGTGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000197916.2 |
||
| 3UTR GCA 72 bp | AGCATACAGAGACATGCCCATCACTTCACACAGATGTaGATATTCCACGTTAGTCAGCCCTGCTCCGTACTT | + |
|
Preference number: 3 (lower is better) Translates to: SIQRHAHHFTQM*IFHVSQPCSVL Trigger: AAGTACGGAGCAGGGCTGACTAACGTGGAATATGCACATCTGTGTGAAGTGATGGGCATGTCTCTGTATGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197916.2 |
||
| 3UTR CCA 72 bp | TTTACCACAGAGCATCTGAATCAGTATTCTGTGACGTaGGCACATCAGTGGTCACACAGTGGCTTCATCCCA | + |
|
Preference number: 3 (lower is better) Translates to: FTTEHLNQYSVT*AHQWSHSGFIP Trigger: TGGGATGAAGCCACTGTGTGACCACTGATGTGCCCACGTCACAGAATACTGATTCAGATGCTCTGTGGTAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041252.13 |
||
| 3UTR GCA 72 bp | CTGAGCCATCTCACTGGGCTTGTGGCTAAAATAGGATaGAGGACAAAAGCCTTAGATGAGAAATGGTGCATC | + |
|
Preference number: 3 (lower is better) Translates to: LSHLTGLVAKIG*RTKALDEKWCI Trigger: GATGCACCATTTCTCATCTAAGGCTTTTGTCCTGCATCCTATTTTAGCCACAAGCCCAGTGAGATGGCTCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111776.6 |
||
| 3UTR CCA 72 bp | AAAATAGGATGCAGGACAAAAGCCTTAGATGAGAAATaGTGCATCAGTCACCCGGAGATGGGCAGAAGTGTG | + |
|
Preference number: 3 (lower is better) Translates to: KIGCRTKALDEK*CISHPEMGRSV Trigger: CACACTTCTGCCCATCTCCGGGTGACTGATGCACCATTTCTCATCTAAGGCTTTTGTCCTGCATCCTATTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111776.6 |
||
| 3UTR CCA 72 bp | AACCTGCCTGTTCCTTGTTTTGAAGAGCAATTAAATTaGTTATTGCAGCCGGGTCTGGTGGCGCACACCTTT | + |
|
Preference number: 3 (lower is better) Translates to: NLPVPCFEEQLN*LLQPGLVAHTF Trigger: AAAGGTGTGCGCCACCAGACCCGGCTGCAATAACCAATTTAATTGCTCTTCAAAACAAGGAACAGGCAGGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131338.2 |
||
| 3UTR CCA 72 bp | TCACTAATTGAGAAAATGTCTTACAGCTGGATCTCATaGAGGCATTTCCTCACCTGGAGCTCCTTTCTCTGT | + |
|
Preference number: 3 (lower is better) Translates to: SLIEKMSYSWIS*RHFLTWSSFLC Trigger: ACAGAGAAAGGAGCTCCAGGTGAGGAAATGCCTCCATGAGATCCAGCTGTAAGACATTTTCTCAATTAGTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041252.13 |
||
| 3UTR TCA 72 bp | AGAATTAAAGGCATAAGATACCATGCCTGGACATATTaGCCAAGGAAGCTGTTATGCACAGGGTCAGTTGCT | + |
|
Preference number: 3 (lower is better) Translates to: RIKGIRYHAWTY*PRKLLCTGSVA Trigger: AGCAACTGACCCTGTGCATAACAGCTTCCTTGGTCAATATGTCCAGGCATGGTATCTTATGCCTTTAATTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131338.2 |
||
| 3UTR TCA 72 bp | ATGTCAGCATATAGGCATGTTACATTAGGGAAAATCTaGAGAGAACTTTCAAGAGTCAGGTCTCTTCTACCA | + |
|
Preference number: 3 (lower is better) Translates to: MSAYRHVTLGKI*RELSRVRSLLP Trigger: TGGTAGAAGAGACCTGACTCTTGAAAGTTCTCTTCAGATTTTCCCTAATGTAACATGCCTATATGCTGACAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111776.6 |
||
| CDS-3UTR CCA 90 bp | CCCAGGGCCCTGGCCCACAGAAGACAAATCCAAGAGGATGCAGGCCTGGTGCCTGACCCCTCACACCCTTaGGAGTCCTCGGGGACCTCG | + |
|
Preference number: 4 (lower is better) Translates to: PRALAHRRQIQEDAGLVPDPSHP*ESSGTS Trigger: CGAGGTCCCCGAGGACTCCCAAGGGTGTGAGGGGTC...AGGCACCAGGCCTGCATCCTCTTGGATTTGTCTTCTGTGGGCCAGGGCCCTGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111776.6 |
||
| CDS-3UTR CCA 90 bp | AGGTGCCCAGATTCCTACAGCCCAGAGGAAGGGGCGGGGGTCACAGGTCAAATCGACCCCTCACACCCTTaGGAGTCCTCGGGGACCTCG | + |
|
Preference number: 4 (lower is better) Translates to: RCPDSYSPEEGAGVTGQIDPSHP*ESSGTS Trigger: CGAGGTCCCCGAGGACTCCCAAGGGTGTGAGGGGTC...GATTTGACCTGTGACCCCCGCCCCTTCCTCTGGGCTGTAGGAATCTGGGCACCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000041252.13 |
||
| CDS-3UTR CCA 90 bp | GGCCTTCGTGGATCTTCCTGCAAGTGTGGTGGCACCTGTGTCCCCAGCCCATGGGATGGTTCAGGGCCGTaGTCCTCCATGCCCAGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: GLRGSSCKCGGTCVPSPWDGSGP*SSMPSA Trigger: TGCACTGGGCATGGAGGACCACGGCCCTGAACCATC...CCATGGGCTGGGGACACAGGTGCCACCACACTTGCAGGAAGATCCACGAAGGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041252.13 |
||
| CDS-3UTR TCA 90 bp | GGAGGCTCAGGTCACAGTGACTGTCGCAGACTGAGCTGCTGGATAGGATGTGAGCGCCCCAGCCTGCCCTaGGCGATCTCAAAGGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: GGSGHSDCRRLSCWIGCERPSLP*AISKAL Trigger: CAGAGCCTTTGAGATCGCTCAGGGCAGGCTGGGGCG...CTCACATCCTATCCAGCAGCTCAGTCTGCGACAGTCACTGTGACCTGAGCCTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041252.13 |
||
| CDS-3UTR TCA 90 bp | AGGTGCCCAGATTCCTACAGCCCAGAGGAAGGGGCGGGGGTCACAGGTCAAATCTCACCCGTGTCTTCATaGGTGCCAGGGCCCTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: RCPDSYSPEEGAGVTGQISPVSS*VPGPSL Trigger: CAGAGAGGGCCCTGGCACTCATGAAGACACGGGTGA...GATTTGACCTGTGACCCCCGCCCCTTCCTCTGGGCTGTAGGAATCTGGGCACCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041252.13 |
||
| CDS-3UTR TCA 90 bp | GGAGGCTCAGGTCACAGTGACTGTCGCAGACTGAGCTGCTGGATAGGATGTGAGGGGGGTAGTCACTGCTaGGGCCCGCTGCTCCAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: GGSGHSDCRRLSCWIGCEGGSHC*GPLLQR Trigger: CCTTTGGAGCAGCGGGCCTCAGCAGTGACTACCCCC...CTCACATCCTATCCAGCAGCTCAGTCTGCGACAGTCACTGTGACCTGAGCCTCC 61% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000041252.13 |
||
| CDS-3UTR CCA 90 bp | CCCCCAGGGCCCTGGCCCACAGAAGACAAATCCAAGAGGATGCAGGCCTGGTGCCCCGGAACCCTTCTTTaGTGGCAAAATCCCAGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: PPGPWPTEDKSKRMQAWCPGTLL*WQNPRP Trigger: TGGCCTGGGATTTTGCCACCAAAGAAGGGTTCCGGG...GCACCAGGCCTGCATCCTCTTGGATTTGTCTTCTGTGGGCCAGGGCCCTGGGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000111776.6 |
||
| CDS-3UTR CCA 90 bp | AGGAAGCAGGAGCTGATGCAGGGGCCATGGAAGGATGTTACTGGCCTGCTTCCCAAGGGCTCCACCTGTTaGCCGAGGCCTGGTGTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: RKQELMQGPWKDVTGLLPKGSTC*PRPGVS Trigger: AGAGACACCAGGCCTCGGCCAACAGGTGGAGCCCTT...GGGAAGCAGGCCAGTAACATCCTTCCATGGCCCCTGCATCAGCTCCTGCTTCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041252.13 |
||
| 3UTR CAA 72 bp | GGCCTGAAACAGAGGTGGGGCTCGGGTTGCTGGAATTaGCCAGTATGCAGGGGCTATGCTGCCATTGAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: GLKQRWGSGCWN*PVCRGYAAIEG Trigger: GCCCTCAATGGCAGCATAGCCCCTGCATACTGGCAAATTCCAGCAACCCGAGCCCCACCTCTGTTTCAGGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041252.13 |
||
| CDS-3UTR GCA 90 bp | CCCAGGGCCCTGGCCCACAGAAGACAAATCCAAGAGGATGCAGGCCTGGTGCCTAGTGAGGATGCAGGATaGCTGAGGTCCACCACTTGT | + |
|
Preference number: 4 (lower is better) Translates to: PRALAHRRQIQEDAGLVPSEDAG*LRSTTC Trigger: ACAAGTGGTGGACCTCAGGCATCCTGCATCCTCACT...AGGCACCAGGCCTGCATCCTCTTGGATTTGTCTTCTGTGGGCCAGGGCCCTGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111776.6 |
||
| CDS-3UTR TCA 90 bp | TCCTCCCCAGCCCAGGGAGGGTCTTTTACATCCAAACTGGGAGTTAGACGGATGGCTGCTACAGTGCTGTaGCCCCTCACACCCTTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: SSPAQGGSFTSKLGVRRMAATVL*PLTPLG Trigger: TCCCAAGGGTGTGAGGGGTCACAGCACTGTAGCAGC...CATCCGTCTAACTCCCAGTTTGGATGTAAAAGACCCTCCCTGGGCTGGGGAGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000041252.13 |
||
| CDS-3UTR TCA 90 bp | AGGAAGCAGGAGCTGATGCAGGGGCCATGGAAGGATGTTACTGGCCTGCTTCCCCCTTGGCTTTCTCCTTaGGGTCTTCTATCAGCGGGG | + |
|
Preference number: 4 (lower is better) Translates to: RKQELMQGPWKDVTGLLPPWLSP*GLLSAG Trigger: CCCCGCTGATAGAAGACCTCAAGGAGAAAGCCAAGG...GGGAAGCAGGCCAGTAACATCCTTCCATGGCCCCTGCATCAGCTCCTGCTTCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041252.13 |
||
| CDS-3UTR TCA 90 bp | AGGTGCCCAGATTCCTACAGCCCAGAGGAAGGGGCGGGGGTCACAGGTCAAATCACACAGAGTTTGCAGTaGGGATGCAGGATGCCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: RCPDSYSPEEGAGVTGQITQSLQ*GCRMPE Trigger: CTCAGGCATCCTGCATCCTCACTGCAAACTCTGTGT...GATTTGACCTGTGACCCCCGCCCCTTCCTCTGGGCTGTAGGAATCTGGGCACCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041252.13 |
||
| CDS-3UTR GCA 90 bp | GTCAGAGAGCCACCAGGACCCTCCTCTGATGGCTCTCCCATTGATCACAAGTACCTACACTCTGCGTGCTaGTGGCTCCTGCAGCCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: VREPPGPSSDGSPIDHKYLHSAC*WLLQPG Trigger: TCCAGGCTGCAGGAGCCAGCAGCACGCAGAGTGTAG...GTACTTGTGATCAATGGGAGAGCCATCAGAGGAGGGTCCTGGTGGCTCTCTGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041252.13 |
||
| CDS-3UTR CCA 90 bp | AGGAAGCAGGAGCTGATGCAGGGGCCATGGAAGGATGTTACTGGCCTGCTTCCCCCCGGAACCCTTCTTTaGTGGCAAAATCCCAGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: RKQELMQGPWKDVTGLLPPGTLL*WQNPRP Trigger: TGGCCTGGGATTTTGCCACCAAAGAAGGGTTCCGGG...GGGAAGCAGGCCAGTAACATCCTTCCATGGCCCCTGCATCAGCTCCTGCTTCCT 58% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000041252.13 |
||
| CDS-3UTR CCA 90 bp | GAACCAGGGCTCCCCAAAGTGCTGTCAGGTATTAGAACCACACTCAGGGAGACTCTGTTGGCCGAGGCCTaGTGTCTCTGCAGCTCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: EPGLPKVLSGIRTTLRETLLAEA*CLCSSG Trigger: GCCAGAGCTGCAGAGACACCAGGCCTCGGCCAACAG...AGTCTCCCTGAGTGTGGTTCTAATACCTGACAGCACTTTGGGGAGCCCTGGTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111776.6 |
||
| CDS-3UTR CCA 90 bp | GCCTCTGCCCGCCTGTCTCCTCTCACAGACTCCTGCTTATCTTCTGAGATCAGAAAGGGCTCCACCTGTTaGCCGAGGCCTGGTGTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: ASARLSPLTDSCLSSEIRKGSTC*PRPGVS Trigger: AGAGACACCAGGCCTCGGCCAACAGGTGGAGCCCTT...TCTGATCTCAGAAGATAAGCAGGAGTCTGTGAGAGGAGACAGGCGGGCAGAGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111776.6 |
||
| CDS-3UTR CCA 90 bp | CACAAGTACATGGCACACACACCCAGCTTTCCCACTCGGGTTCTGGATCACAATCCTGCCCTCCAACAGTaGCACCAGCCAGCGGGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: HKYMAHTPSFPTRVLDHNPALQQ*HQPAGL Trigger: AAGGCCCGCTGGCTGGTGCCACTGTTGGAGGGCAGG...ATTGTGATCCAGAACCCGAGTGGGAAAGCTGGGTGTGTGTGCCATGTACTTGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041252.13 |
||
| CDS-3UTR TCA 90 bp | GAGCTCAGAGGACAACCAGCAGAGCCAGCTAGTTTTCTCTACCATGTGGGTCCCCCTCCCTTTGCCTCATaGGAAGGGGAAGCAGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: ELRGQPAEPASFLYHVGPPPFAS*EGEAAA Trigger: AGCAGCTGCTTCCCCTTCTCATGAGGCAAAGGGAGG...GGGACCCACATGGTAGAGAAAACTAGCTGGCTCTGCTGGTTGTCCTCTGAGCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000111776.6 |
||
| CDS-3UTR TCA 90 bp | CACAAGTACATGGCACACACACCCAGCTTTCCCACTCGGGTTCTGGATCACAATGGCCCTCTGGAGAGATaGCCAGGCCTCCCTTTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: HKYMAHTPSFPTRVLDHNGPLER*PGLPLP Trigger: AGGCAAAGGGAGGCCTGGTCATCTCTCCAGAGGGCC...ATTGTGATCCAGAACCCGAGTGGGAAAGCTGGGTGTGTGTGCCATGTACTTGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041252.13 |
||
| CDS-3UTR TCA 90 bp | GTGACGTGGGCACATCAGTGGTCACACAGTGGCTTCATCCCAGGGGCATTTGCTGCGCGGTCAATTACTTaGTTGGCCATGGAAGGGACG | + |
|
Preference number: 4 (lower is better) Translates to: VTWAHQWSHSGFIPGAFAARSIT*LAMEGT Trigger: CGTCCCTTCCATGGCCAATCAAGTAATTGACCGCGC...AGCAAATGCCCCTGGGATGAAGCCACTGTGTGACCACTGATGTGCCCACGTCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041252.13 |
||
| CDS-3UTR CCA 90 bp | TCCCCTGGCTTGCTCAGTTTTCCTTCTTATAGAACCCAGGACTACCAGTCCAGGCTGTTGGCCGAGGCCTaGTGTCTCTGCAGCTCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: SPGLLSFPSYRTQDYQSRLLAEA*CLCSSG Trigger: GCCAGAGCTGCAGAGACACCAGGCCTCGGCCAACAG...CCTGGACTGGTAGTCCTGGGTTCTATAAGAAGGAAAACTGAGCAAGCCAGGGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041252.13 |
||
| CDS-3UTR CCA 90 bp | TGTGTGCATATGCCCAAGCATGCGCGAGGAGCTCAGAGGACAACCAGCAGAGCCATGGCGAAGCACGAATaGATCCTGCCCTCCAACAGT | + |
|
Preference number: 4 (lower is better) Translates to: CVHMPKHARGAQRTTSRAMAKHE*ILPSNS Trigger: ACTGTTGGAGGGCAGGATCCATTCGTGCTTCGCCAT...GGCTCTGCTGGTTGTCCTCTGAGCTCCTCGCGCATGCTTGGGCATATGCACACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111776.6 |
||
| CDS-3UTR CCA 90 bp | TTTGAACCCACACCAGCTTGGTCACCCCTGACTGACCCTCCTGCAGATCCTCACTGCAGATTCCAGGCATaGACACTGCCCTGTGAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: FEPTPAWSPLTDPPADPHCRFQA*TLPCEL Trigger: GAGCTCACAGGGCAGTGTCCATGCCTGGAATCTGCA...GTGAGGATCTGCAGGAGGGTCAGTCAGGGGTGACCAAGCTGGTGTGGGTTCAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131338.2 |
||
| CDS-3UTR CCA 90 bp | ACCAAGGAAGCTGTTATGCACAGGGTCAGTTGCTGTGACCCCAGGGGCACAAACGTGCCCATCCCACTCTaGAAGCCAGCTGAAGCCATG | + |
|
Preference number: 4 (lower is better) Translates to: TKEAVMHRVSCCDPRGTNVPIPL*KPAEAM Trigger: CATGGCTTCAGCTGGCTTCCAGAGTGGGATGGGCAC...GTTTGTGCCCCTGGGGTCACAGCAACTGACCCTGTGCATAACAGCTTCCTTGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131338.2 |
||
| 3UTR CAA 72 bp | ATCAGTGGTCACACAGTGGCTTCATCCCAGGGGCATTaGCTGTGCACCACGCCCCCTGCTTTCCTAGAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: ISGHTVASSQGH*LCTTPPAFLEA Trigger: TGCTTCTAGGAAAGCAGGGGGCGTGGTGCACAGCAAATGCCCCTGGGATGAAGCCACTGTGTGACCACTGAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041252.13 |
||
| CDS-3UTR TCA 90 bp | CCTTGTTTTGAAGAGCAATTAAATTGGTTATTGCAGCCGGGTCTGGTGGCGCACCGCCCCAGCCTGCCCTaGGCGATCTCAAAGGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: PCFEEQLNWLLQPGLVAHRPSLP*AISKAL Trigger: CAGAGCCTTTGAGATCGCTCAGGGCAGGCTGGGGCG...GTGCGCCACCAGACCCGGCTGCAATAACCAATTTAATTGCTCTTCAAAACAAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131338.2 |
||
| CDS-3UTR TCA 90 bp | TCTGCTGCCATGGTAGTAGCAGAGTCCCTAGCCTTTAAGGGGCTCATGGCCAATTTACCCGTGTCTTCATaGGTGCCAGGGCCCTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: SAAMVVAESLAFKGLMANLPVSS*VPGPSL Trigger: CAGAGAGGGCCCTGGCACTCATGAAGACACGGGTAA...ATTGGCCATGAGCCCCTTAAAGGCTAGGGACTCTGCTACTACCATGGCAGCAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131338.2 |
||
| CDS-3UTR GCA 90 bp | AGCTCAGAGGACAACCAGCAGAGCCAGCTAGTTTTCTCTACCATGTGGGTCCCAGACCAGGCCTCCCTTTaGCTCATGAGAAGGGGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: SSEDNQQSQLVFSTMWVPDQASL*LMRRGS Trigger: GCTTCCCCTTCTCATGAGGCAAAGGGAGGCCTGGTC...TGGGACCCACATGGTAGAGAAAACTAGCTGGCTCTGCTGGTTGTCCTCTGAGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111776.6 |
||
| CDS-3UTR CCA 90 bp | CACAAGTACATGGCACACACACCCAGCTTTCCCACTCGGGTTCTGGATCACAATGTTGCTGAGCTTGCCTaGCCCACAGCCACTGTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: HKYMAHTPSFPTRVLDHNVAELA*PTATVP Trigger: AGGGACAGTGGCTGTGGGCCAGGCAAGCTCAGCAAC...ATTGTGATCCAGAACCCGAGTGGGAAAGCTGGGTGTGTGTGCCATGTACTTGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041252.13 |
||
| CDS-3UTR CCA 90 bp | GAGACAGGGTTTCTCTGTGTAGTTGAACTCAGAGACCTACCTAAATCTGCCTCCCCTGCCCTCCAACAGTaGCACCAGCCAGCGGGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: ETGFLCVVELRDLPKSASPALQQ*HQPAGL Trigger: AAGGCCCGCTGGCTGGTGCCACTGTTGGAGGGCAGG...GGAGGCAGATTTAGGTAGGTCTCTGAGTTCAACTACACAGAGAAACCCTGTCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111776.6 |
||
| 3UTR CAA 72 bp | GAGAGCCACCAGGACCCTCCTCTGATGGCTCTCCCATaGATCACAAGTACATGGCACACACACCCAGCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: ESHQDPPLMALP*ITSTWHTHPAF Trigger: GAAAGCTGGGTGTGTGTGCCATGTACTTGTGATCAATGGGAGAGCCATCAGAGGAGGGTCCTGGTGGCTCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041252.13 |
||
| CDS-3UTR TCA 90 bp | GTCTGGACTGGGCCTCATCAATACCTTCAGATCCTTGGCATGTGGCAAATTCTGTTGTTGGGCTGTTGCTaGGCTTGCCTGGCCCACAGC | + |
|
Preference number: 4 (lower is better) Translates to: VWTGPHQYLQILGMWQILLLGCC*ACLAHS Trigger: GCTGTGGGCCAGGCAAGCTCAGCAACAGCCCAACAA...CAGAATTTGCCACATGCCAAGGATCTGAAGGTATTGATGAGGCCCAGTCCAGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111776.6 |
||
| CDS-3UTR TCA 90 bp | TCCTCCCCAGCCCAGGGAGGGTCTTTTACATCCAAACTGGGAGTTAGACGGATGCAGCCATGGACTCAGTaGGCTTTCCACTTTGTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: SSPAQGGSFTSKLGVRRMQPWTQ*AFHFVG Trigger: CCCAACAAAGTGGAAAGCTCACTGAGTCCATGGCTG...CATCCGTCTAACTCCCAGTTTGGATGTAAAAGACCCTCCCTGGGCTGGGGAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041252.13 |
||
| CDS-3UTR TCA 90 bp | GTCTGGACTGGGCCTCATCAATACCTTCAGATCCTTGGCATGTGGCAAATTCTGGCTGCTACAGTGCTGTaGCCCCTCACACCCTTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: VWTGPHQYLQILGMWQILAATVL*PLTPLG Trigger: TCCCAAGGGTGTGAGGGGTCACAGCACTGTAGCAGC...CAGAATTTGCCACATGCCAAGGATCTGAAGGTATTGATGAGGCCCAGTCCAGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111776.6 |
||
| CDS-3UTR TCA 90 bp | GAAATGAAAGTCTGGACTGGGCCTCATCAATACCTTCAGATCCTTGGCATGTGGGGCCCTCTGGAGAGATaGCCAGGCCTCCCTTTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: EMKVWTGPHQYLQILGMWGPLER*PGLPLP Trigger: AGGCAAAGGGAGGCCTGGTCATCTCTCCAGAGGGCC...CCACATGCCAAGGATCTGAAGGTATTGATGAGGCCCAGTCCAGACTTTCATTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111776.6 |
||
| CDS-3UTR TCA 90 bp | GTCAGAGAGCCACCAGGACCCTCCTCTGATGGCTCTCCCATTGATCACAAGTACGATGTTAGAGGCATCTaGGGAGGCCACCTTTCGATC | + |
|
Preference number: 4 (lower is better) Translates to: VREPPGPSSDGSPIDHKYDVRGI*GGHLSI Trigger: GATCGAAAGGTGGCCTCCTCAGATGCCTCTAACATC...GTACTTGTGATCAATGGGAGAGCCATCAGAGGAGGGTCCTGGTGGCTCTCTGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041252.13 |
||
| CDS-3UTR TCA 90 bp | CACAAGTACATGGCACACACACCCAGCTTTCCCACTCGGGTTCTGGATCACAATGCCACATCCATGAGGTaGGCAGCTTTCAGCACCAGC | + |
|
Preference number: 4 (lower is better) Translates to: HKYMAHTPSFPTRVLDHNATSMR*AAFSTS Trigger: GCTGGTGCTGAAAGCTGCTCACCTCATGGATGTGGC...ATTGTGATCCAGAACCCGAGTGGGAAAGCTGGGTGTGTGTGCCATGTACTTGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041252.13 |
||
| CDS-3UTR GCA 90 bp | CACAAGTACATGGCACACACACCCAGCTTTCCCACTCGGGTTCTGGATCACAATGACCAGGCCTCCCTTTaGCTCATGAGAAGGGGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: HKYMAHTPSFPTRVLDHNDQASL*LMRRGS Trigger: GCTTCCCCTTCTCATGAGGCAAAGGGAGGCCTGGTC...ATTGTGATCCAGAACCCGAGTGGGAAAGCTGGGTGTGTGTGCCATGTACTTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041252.13 |
||
| CDS-3UTR GCA 90 bp | TCCTCCCCAGCCCAGGGAGGGTCTTTTACATCCAAACTGGGAGTTAGACGGATGAGTGAGGATGCAGGATaGCTGAGGTCCACCACTTGT | + |
|
Preference number: 4 (lower is better) Translates to: SSPAQGGSFTSKLGVRRMSEDAG*LRSTTC Trigger: ACAAGTGGTGGACCTCAGGCATCCTGCATCCTCACT...CATCCGTCTAACTCCCAGTTTGGATGTAAAAGACCCTCCCTGGGCTGGGGAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041252.13 |
||
| CDS-3UTR CCA 90 bp | TGTGTGCATATGCCCAAGCATGCGCGAGGAGCTCAGAGGACAACCAGCAGAGCCTGCAGAGTGGAAGGCTaGAAAAGTCTTCTTACCCAC | + |
|
Preference number: 4 (lower is better) Translates to: CVHMPKHARGAQRTTSRACRVEG*KSLLTH Trigger: GTGGGTAAGAAGACTTTTCCAGCCTTCCACTCTGCA...GGCTCTGCTGGTTGTCCTCTGAGCTCCTCGCGCATGCTTGGGCATATGCACACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111776.6 |
||
| CDS-3UTR CCA 90 bp | GTCTGGACTGGGCCTCATCAATACCTTCAGATCCTTGGCATGTGGCAAATTCTGGATGGTTCAGGGCCGTaGTCCTCCATGCCCAGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: VWTGPHQYLQILGMWQILDGSGP*SSMPSA Trigger: TGCACTGGGCATGGAGGACCACGGCCCTGAACCATC...CAGAATTTGCCACATGCCAAGGATCTGAAGGTATTGATGAGGCCCAGTCCAGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111776.6 |
||
| CDS-3UTR CCA 90 bp | GTCTGGACTGGGCCTCATCAATACCTTCAGATCCTTGGCATGTGGCAAATTCTGGTTGCTGAGCTTGCCTaGCCCACAGCCACTGTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: VWTGPHQYLQILGMWQILVAELA*PTATVP Trigger: AGGGACAGTGGCTGTGGGCCAGGCAAGCTCAGCAAC...CAGAATTTGCCACATGCCAAGGATCTGAAGGTATTGATGAGGCCCAGTCCAGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111776.6 |
||
| CDS-3UTR CCA 90 bp | TTTGAACCCACACCAGCTTGGTCACCCCTGACTGACCCTCCTGCAGATCCTCACTGTGCTGGGAACAAATaGTTCCTGGCTGCCACAATC | + |
|
Preference number: 4 (lower is better) Translates to: FEPTPAWSPLTDPPADPHCAGNK*FLAATI Trigger: GATTGTGGCAGCCAGGAACCATTTGTTCCCAGCACA...GTGAGGATCTGCAGGAGGGTCAGTCAGGGGTGACCAAGCTGGTGTGGGTTCAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131338.2 |
||
| 3UTR CAA 72 bp | GGGAGGGCACATTACTCTTCAAATCTCAGCGGCACCTaGCCTGTCACCCTCCATGCCCCAACACAACCAATA | + |
|
Preference number: 4 (lower is better) Translates to: GRAHYSSNLSGT*PVTLHAPTQPI Trigger: TATTGGTTGTGTTGGGGCATGGAGGGTGACAGGCAAGGTGCCGCTGAGATTTGAAGAGTAATGTGCCCTCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041252.13 |
||
| CDS-3UTR CCA 90 bp | GTCAGAGAGCCACCAGGACCCTCCTCTGATGGCTCTCCCATTGATCACAAGTACAGCTTTCCACTTTGTTaGGCTGTTGCTGAGCTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: VREPPGPSSDGSPIDHKYSFPLC*AVAELA Trigger: GGCAAGCTCAGCAACAGCCCAACAAAGTGGAAAGCT...GTACTTGTGATCAATGGGAGAGCCATCAGAGGAGGGTCCTGGTGGCTCTCTGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041252.13 |
||
| CDS-3UTR CCA 90 bp | TCTGAACAGAACCAGGGCTCCCCAAAGTGCTGTCAGGTATTAGAACCACACTCAGTGTCTCTGCAGCTCTaGCTCCAGGGGGTACACCTT | + |
|
Preference number: 4 (lower is better) Translates to: SEQNQGSPKCCQVLEPHSVSLQL*LQGVHL Trigger: AAGGTGTACCCCCTGGAGCCAGAGCTGCAGAGACAC...TGAGTGTGGTTCTAATACCTGACAGCACTTTGGGGAGCCCTGGTTCTGTTCAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111776.6 |
||
| 3UTR CAA 72 bp | AGTTTTCTCTACCATGTGGGTCCCAAGGAATCAGGCTaGGTGGACATACCCACTGAGCCATCTCACTGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: SFLYHVGPKESG*VDIPTEPSHWA Trigger: AGCCCAGTGAGATGGCTCAGTGGGTATGTCCACCAAGCCTGATTCCTTGGGACCCACATGGTAGAGAAAACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111776.6 |
||
| CDS-3UTR TCA 90 bp | GACATAGGAAGTAGACAGATTCTTTGTGTCCCGAAAGGCCCTTTTACCACAGAGTTGTTGGGCTGTTGCTaGGCTTGCCTGGCCCACAGC | + |
|
Preference number: 4 (lower is better) Translates to: DIGSRQILCVPKGPFTTELLGCC*ACLAHS Trigger: GCTGTGGGCCAGGCAAGCTCAGCAACAGCCCAACAA...CTCTGTGGTAAAAGGGCCTTTCGGGACACAAAGAATCTGTCTACTTCCTATGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041252.13 |
||
| CDS-3UTR TCA 90 bp | TCTGAACAGAACCAGGGCTCCCCAAAGTGCTGTCAGGTATTAGAACCACACTCACCTTGGCTTTCTCCTTaGGGTCTTCTATCAGCGGGG | + |
|
Preference number: 4 (lower is better) Translates to: SEQNQGSPKCCQVLEPHSPWLSP*GLLSAG Trigger: CCCCGCTGATAGAAGACCTCAAGGAGAAAGCCAAGG...TGAGTGTGGTTCTAATACCTGACAGCACTTTGGGGAGCCCTGGTTCTGTTCAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111776.6 |
||
| CDS-3UTR TCA 90 bp | GGCCTTCGTGGATCTTCCTGCAAGTGTGGTGGCACCTGTGTCCCCAGCCCATGGACTTGTGACCATTTATaGCATAGGAGTTATCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: GLRGSSCKCGGTCVPSPWTCDHL*HRSYLP Trigger: AGGAAGATAACTCCTATGTCATAAATGGTCACAAGT...CCATGGGCTGGGGACACAGGTGCCACCACACTTGCAGGAAGATCCACGAAGGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041252.13 |
||
| CDS-3UTR TCA 90 bp | CCCAGGGCCCTGGCCCACAGAAGACAAATCCAAGAGGATGCAGGCCTGGTGCCTACTTGTGACCATTTATaGCATAGGAGTTATCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: PRALAHRRQIQEDAGLVPTCDHL*HRSYLP Trigger: AGGAAGATAACTCCTATGTCATAAATGGTCACAAGT...AGGCACCAGGCCTGCATCCTCTTGGATTTGTCTTCTGTGGGCCAGGGCCCTGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111776.6 |
||
| CDS-3UTR CCA 90 bp | GAGCTCAGAGGACAACCAGCAGAGCCAGCTAGTTTTCTCTACCATGTGGGTCCCCAGTGTTTTGGTGGCTaGCATCTCTTTGAAAACCCG | + |
|
Preference number: 4 (lower is better) Translates to: ELRGQPAEPASFLYHVGPQCFGG*HLFENP Trigger: CGGGTTTTCAAAGAGATGCCAGCCACCAAAACACTG...GGGACCCACATGGTAGAGAAAACTAGCTGGCTCTGCTGGTTGTCCTCTGAGCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000111776.6 |
||
| CDS-3UTR TCA 90 bp | GGTTTATTCGGCTTACACTTCCACATTGCTGTTCATCACCAAGGAAGTCAGGACCCTCCCTTTGCCTCATaGGAAGGGGAAGCAGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: GLFGLHFHIAVHHQGSQDPPFAS*EGEAAA Trigger: AGCAGCTGCTTCCCCTTCTCATGAGGCAAAGGGAGG...GTCCTGACTTCCTTGGTGATGAACAGCAATGTGGAAGTGTAAGCCGAATAAACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041252.13 |
||
| CDS-3UTR TCA 90 bp | CATGTAGGTCCTGAGGATAGAACTCAGGGTGCCCAGCTTGCAGCAAGCATTTTTACACAGAGTTTGCAGTaGGGATGCAGGATGCCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: HVGPEDRTQGAQLAASIFTQSLQ*GCRMPE Trigger: CTCAGGCATCCTGCATCCTCACTGCAAACTCTGTGT...AAAAATGCTTGCTGCAAGCTGGGCACCCTGAGTTCTATCCTCAGGACCTACATG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111776.6 |
||
| CDS-3UTR TCA 90 bp | GTCTGGACTGGGCCTCATCAATACCTTCAGATCCTTGGCATGTGGCAAATTCTGCTCCAAACCAAACACTaGCAGAGGCCGGATGACTGT | + |
|
Preference number: 4 (lower is better) Translates to: VWTGPHQYLQILGMWQILLQTKH*QRPDDC Trigger: ACAGTCATCCGGCCTCTGTCAGTGTTTGGTTTGGAG...CAGAATTTGCCACATGCCAAGGATCTGAAGGTATTGATGAGGCCCAGTCCAGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111776.6 |
||
| CDS-3UTR CCA 90 bp | CACAAGTACATGGCACACACACCCAGCTTTCCCACTCGGGTTCTGGATCACAATATGCCCAGTGCAGAGTaGAAGGCTGGAAAAGTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: HKYMAHTPSFPTRVLDHNMPSAE*KAGKVF Trigger: GAAGACTTTTCCAGCCTTCCACTCTGCACTGGGCAT...ATTGTGATCCAGAACCCGAGTGGGAAAGCTGGGTGTGTGTGCCATGTACTTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041252.13 |
||
| CDS-3UTR CCA 90 bp | GACATAGGAAGTAGACAGATTCTTTGTGTCCCGAAAGGCCCTTTTACCACAGAGGTGTCTCTGCAGCTCTaGCTCCAGGGGGTACACCTT | + |
|
Preference number: 4 (lower is better) Translates to: DIGSRQILCVPKGPFTTEVSLQL*LQGVHL Trigger: AAGGTGTACCCCCTGGAGCCAGAGCTGCAGAGACAC...CTCTGTGGTAAAAGGGCCTTTCGGGACACAAAGAATCTGTCTACTTCCTATGTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041252.13 |
||
| CDS-3UTR CCA 90 bp | CCTGGCTTGCTCAGTTTTCCTTCTTATAGAACCCAGGACTACCAGTCCAGGGATATGGCGAAGCACGAATaGATCCTGCCCTCCAACAGT | + |
|
Preference number: 4 (lower is better) Translates to: PGLLSFPSYRTQDYQSRDMAKHE*ILPSNS Trigger: ACTGTTGGAGGGCAGGATCCATTCGTGCTTCGCCAT...ATCCCTGGACTGGTAGTCCTGGGTTCTATAAGAAGGAAAACTGAGCAAGCCAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041252.13 |
||
| CDS-3UTR CCA 90 bp | GGTTTATTCGGCTTACACTTCCACATTGCTGTTCATCACCAAGGAAGTCAGGACCAATGTCTGCCAGGATaGTGCCCTGCTCCACAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: GLFGLHFHIAVHHQGSQDQCLPG*CPAPQG Trigger: CCCTTGTGGAGCAGGGCACCATCCTGGCAGACATTG...GTCCTGACTTCCTTGGTGATGAACAGCAATGTGGAAGTGTAAGCCGAATAAACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041252.13 |
||
| CDS-3UTR TCA 90 bp | CGCCTAAAGCTTGAGCTCAGTCTCTCCAGAAACATCTTCTTGAAGAGACCCCAGTGGCTGGCATCTCTTTaGAAACCCGGAACCCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: RLKLELSLSRNIFLKRPQWLASL*KPGTLL Trigger: AAGAAGGGTTCCGGGTTTTCAAAGAGATGCCAGCCA...CTGGGGTCTCTTCAAGAAGATGTTTCTGGAGAGACTGAGCTCAAGCTTTAGGCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041252.13 |
||
| CDS-3UTR CCA 90 bp | CACAAGTACATGGCACACACACCCAGCTTTCCCACTCGGGTTCTGGATCACAATTGCAGAGTGGAAGGCTaGAAAAGTCTTCTTACCCAC | + |
|
Preference number: 4 (lower is better) Translates to: HKYMAHTPSFPTRVLDHNCRVEG*KSLLTH Trigger: GTGGGTAAGAAGACTTTTCCAGCCTTCCACTCTGCA...ATTGTGATCCAGAACCCGAGTGGGAAAGCTGGGTGTGTGTGCCATGTACTTGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041252.13 |
||
| CDS-3UTR CCA 90 bp | AGGGACAGAGCAATTAAATATCTCAGAAGCATACAGAGACATGCCCATCACTTCGATGGTTCAGGGCCGTaGTCCTCCATGCCCAGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: RDRAIKYLRSIQRHAHHFDGSGP*SSMPSA Trigger: TGCACTGGGCATGGAGGACCACGGCCCTGAACCATC...GAAGTGATGGGCATGTCTCTGTATGCTTCTGAGATATTTAATTGCTCTGTCCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197916.2 |
||
| CDS-3UTR CCA 90 bp | TCTGAACAGAACCAGGGCTCCCCAAAGTGCTGTCAGGTATTAGAACCACACTCAAGCTTTCCACTTTGTTaGGCTGTTGCTGAGCTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: SEQNQGSPKCCQVLEPHSSFPLC*AVAELA Trigger: GGCAAGCTCAGCAACAGCCCAACAAAGTGGAAAGCT...TGAGTGTGGTTCTAATACCTGACAGCACTTTGGGGAGCCCTGGTTCTGTTCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111776.6 |
||
| CDS-3UTR CCA 90 bp | TCCCCTGGCTTGCTCAGTTTTCCTTCTTATAGAACCCAGGACTACCAGTCCAGGGGTCAATTACTTGATTaGCCATGGAAGGGACGACCA | + |
|
Preference number: 4 (lower is better) Translates to: SPGLLSFPSYRTQDYQSRGQLLD*PWKGRP Trigger: TGGTCGTCCCTTCCATGGCCAATCAAGTAATTGACC...CCTGGACTGGTAGTCCTGGGTTCTATAAGAAGGAAAACTGAGCAAGCCAGGGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000041252.13 |
||
| CDS-3UTR TCA 90 bp | GACATAGGAAGTAGACAGATTCTTTGTGTCCCGAAAGGCCCTTTTACCACAGAGCTCCAAACCAAACACTaGCAGAGGCCGGATGACTGT | + |
|
Preference number: 4 (lower is better) Translates to: DIGSRQILCVPKGPFTTELQTKH*QRPDDC Trigger: ACAGTCATCCGGCCTCTGTCAGTGTTTGGTTTGGAG...CTCTGTGGTAAAAGGGCCTTTCGGGACACAAAGAATCTGTCTACTTCCTATGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041252.13 |
||
| CDS-3UTR CCA 90 bp | GAGACAGGGTTTCTCTGTGTAGTTGAACTCAGAGACCTACCTAAATCTGCCTCCATGCCCAGTGCAGAGTaGAAGGCTGGAAAAGTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: ETGFLCVVELRDLPKSASMPSAE*KAGKVF Trigger: GAAGACTTTTCCAGCCTTCCACTCTGCACTGGGCAT...GGAGGCAGATTTAGGTAGGTCTCTGAGTTCAACTACACAGAGAAACCCTGTCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111776.6 |
||
| CDS-3UTR CCA 90 bp | CGCCTAAAGCTTGAGCTCAGTCTCTCCAGAAACATCTTCTTGAAGAGACCCCAGCAGTGTTTTGGTGGCTaGCATCTCTTTGAAAACCCG | + |
|
Preference number: 4 (lower is better) Translates to: RLKLELSLSRNIFLKRPQQCFGG*HLFENP Trigger: CGGGTTTTCAAAGAGATGCCAGCCACCAAAACACTG...CTGGGGTCTCTTCAAGAAGATGTTTCTGGAGAGACTGAGCTCAAGCTTTAGGCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000041252.13 |
||
| 3UTR CAA 72 bp | CCTGTTCCTTGTTTTGAAGAGCAATTAAATTGGTTATaGCAGCCGGGTCTGGTGGCGCACACCTTTCACACC | + |
|
Preference number: 4 (lower is better) Translates to: PVPCFEEQLNWL*QPGLVAHTFHT Trigger: GGTGTGAAAGGTGTGCGCCACCAGACCCGGCTGCAATAACCAATTTAATTGCTCTTCAAAACAAGGAACAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131338.2 |
||
| CDS-3UTR CCA 90 bp | CCTGTTCCTTGTTTTGAAGAGCAATTAAATTGGTTATTGCAGCCGGGTCTGGTGCTCAGAGGAGACCAGTaGTTGGAATTCCTCAGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: PVPCFEEQLNWLLQPGLVLRGDQ*LEFLSQ Trigger: CTGGCTGAGGAATTCCAACCACTGGTCTCCTCTGAG...CACCAGACCCGGCTGCAATAACCAATTTAATTGCTCTTCAAAACAAGGAACAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131338.2 |
||
| CDS-3UTR CCA 90 bp | CTTACACTTCCACATTGCTGTTCATCACCAAGGAAGTCAGGACTGGAACTAAAAGGAACCCTTCTTTGGTaGCAAAATCCCAGGCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: LTLPHCCSSPRKSGLELKGTLLW*QNPRPA Trigger: AGCTGGCCTGGGATTTTGCCACCAAAGAAGGGTTCC...TTTTAGTTCCAGTCCTGACTTCCTTGGTGATGAACAGCAATGTGGAAGTGTAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041252.13 |
||
| CDS-3UTR TCA 90 bp | TTCTTTTTGGAGACAGGGTTTCTCTGTGTAGTTGAACTCAGAGACCTACCTAAACAGCCATGGACTCAGTaGGCTTTCCACTTTGTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: FFLETGFLCVVELRDLPKQPWTQ*AFHFVG Trigger: CCCAACAAAGTGGAAAGCTCACTGAGTCCATGGCTG...TTTAGGTAGGTCTCTGAGTTCAACTACACAGAGAAACCCTGTCTCCAAAAAGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111776.6 |
||
| CDS-3UTR TCA 90 bp | TTCTTTTTGGAGACAGGGTTTCTCTGTGTAGTTGAACTCAGAGACCTACCTAAAGATGTTAGAGGCATCTaGGGAGGCCACCTTTCGATC | + |
|
Preference number: 4 (lower is better) Translates to: FFLETGFLCVVELRDLPKDVRGI*GGHLSI Trigger: GATCGAAAGGTGGCCTCCTCAGATGCCTCTAACATC...TTTAGGTAGGTCTCTGAGTTCAACTACACAGAGAAACCCTGTCTCCAAAAAGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111776.6 |
||
| CDS-3UTR TCA 90 bp | TATCAAACTGTAAAGACTTGTTCTCAATGTCCTCAGTTTCTACCTGTTCCACACACAATCCTCTGGGGTTaGGAACCTTGCCCTCAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: YQTVKTCSQCPQFLPVPHTILWG*EPCPQP Trigger: TGGCTGAGGGCAAGGTTCTCAACCCCAGAGGATTGT...GTGTGGAACAGGTAGAAACTGAGGACATTGAGAACAAGTCTTTACAGTTTGATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131338.2 |
||
| CDS-3UTR CCA 90 bp | TTCTTTTTGGAGACAGGGTTTCTCTGTGTAGTTGAACTCAGAGACCTACCTAAAGGAACCCTTCTTTGGTaGCAAAATCCCAGGCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: FFLETGFLCVVELRDLPKGTLLW*QNPRPA Trigger: AGCTGGCCTGGGATTTTGCCACCAAAGAAGGGTTCC...TTTAGGTAGGTCTCTGAGTTCAACTACACAGAGAAACCCTGTCTCCAAAAAGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111776.6 |
||
| 3UTR CAA 72 bp | GCTGGCCCTGGTTTCTCAGAGAGCTTCCTGTATTCTTaGATTTACACGCAGGGTTTACTCATCACCAGAATA | + |
|
Preference number: 4 (lower is better) Translates to: AGPGFSESFLYS*IYTQGLLITRI Trigger: TATTCTGGTGATGAGTAAACCCTGCGTGTAAATCAAAGAATACAGGAAGCTCTCTGAGAAACCAGGGCCAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131338.2 |
||
| CDS-3UTR TCA 90 bp | CCCGGATTTATATCCCAGGCAGATTATAAGCCTTATACAAGTATAAGCCTTATAATGGACACTGCCCTGTaGGCTCTGTTCTCAGAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: PGFISQADYKPYTSISLIMDTAL*ALFSEE Trigger: CTCCTCTGAGAACAGAGCTCACAGGGCAGTGTCCAT...TATAAGGCTTATACTTGTATAAGGCTTATAATCTGCCTGGGATATAAATCCGGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131338.2 |
||
| CDS-3UTR GCA 90 bp | TATCAAACTGTAAAGACTTGTTCTCAATGTCCTCAGTTTCTACCTGTTCCACACAGCCACCATAAAACCTaGTCTTGGCTTCTGGCCACC | + |
|
Preference number: 4 (lower is better) Translates to: YQTVKTCSQCPQFLPVPHSHHKT*SWLLAT Trigger: GGTGGCCAGAAGCCAAGAGCAGGTTTTATGGTGGCT...GTGTGGAACAGGTAGAAACTGAGGACATTGAGAACAAGTCTTTACAGTTTGATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131338.2 |
||
| CDS-3UTR GCA 90 bp | TATCAAACTGTAAAGACTTGTTCTCAATGTCCTCAGTTTCTACCTGTTCCACACCAAATGGTTCCTGGCTaGCACAATCCTCTGGGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: YQTVKTCSQCPQFLPVPHQMVPG*HNPLGL Trigger: CAACCCCAGAGGATTGTGGCAGCCAGGAACCATTTG...GTGTGGAACAGGTAGAAACTGAGGACATTGAGAACAAGTCTTTACAGTTTGATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131338.2 |
||
| CDS-3UTR CCA 90 bp | AGGGACAGAGCAATTAAATATCTCAGAAGCATACAGAGACATGCCCATCACTTCTGCAGAGTGGAAGGCTaGAAAAGTCTTCTTACCCAC | + |
|
Preference number: 4 (lower is better) Translates to: RDRAIKYLRSIQRHAHHFCRVEG*KSLLTH Trigger: GTGGGTAAGAAGACTTTTCCAGCCTTCCACTCTGCA...GAAGTGATGGGCATGTCTCTGTATGCTTCTGAGATATTTAATTGCTCTGTCCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197916.2 |
||
| CDS-3UTR TCA 90 bp | AAGAACGATTGGCCACTTAACCTCCTTCTTTACATCATCAAAATAGTAATGGTGCTCCAAACCAAACACTaGCAGAGGCCGGATGACTGT | + |
|
Preference number: 4 (lower is better) Translates to: KNDWPLNLLLYIIKIVMVLQTKH*QRPDDC Trigger: ACAGTCATCCGGCCTCTGTCAGTGTTTGGTTTGGAG...CACCATTACTATTTTGATGATGTAAAGAAGGAGGTTAAGTGGCCAATCGTTCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131338.2 |
||
| CDS-3UTR CCA 90 bp | AAGAACGATTGGCCACTTAACCTCCTTCTTTACATCATCAAAATAGTAATGGTGGAGGAGACCAGTGGTTaGAATTCCTCAGCCAGCAAC | + |
|
Preference number: 4 (lower is better) Translates to: KNDWPLNLLLYIIKIVMVEETSG*NSSASN Trigger: GTTGCTGGCTGAGGAATTCCAACCACTGGTCTCCTC...CACCATTACTATTTTGATGATGTAAAGAAGGAGGTTAAGTGGCCAATCGTTCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131338.2 |
||
| 3UTR CAA 72 bp | CCAAGTTCTGGTATTAAAGGCATGTGCCATCACTACTaGTATATGATGTCAGCATATAGGCATGTTACATTA | + |
|
Preference number: 4 (lower is better) Translates to: PSSGIKGMCHHY*YMMSAYRHVTL Trigger: TAATGTAACATGCCTATATGCTGACATCATATACAAGTAGTGATGGCACATGCCTTTAATACCAGAACTTGG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111776.6 |
||
| CDS CCA 90 bp | GGGCCTGCTCGATCTCCACACGTGACCGGGCAATGTCTGCCAGGATaGTGCCCTGCTCCACAAGGGGCTTCCCGAAGGCCGTGCGGGACA | + |
|
Preference number: 5 (lower is better) Translates to: GPARSPHVTGQCLPG*CPAPQGASRRPCGT Trigger: TGTCCCGCACGGCCTTCGGGAAGCCCCTTGTGGAGCAGGGCACCATCCTGGCAGACATTGCCCGGTCACGTGTGGAGATCGAGCAGGCCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041252.13 |
||
| CDS GCA 90 bp | TCGATCTCCACACGTGACCGGGCAATGTCTGCCAGGATGGTGCCCTaGTCCACAAGGGGCTTCCCGAAGGCCGTGCGGGACATCACCCGT | + |
|
Preference number: 5 (lower is better) Translates to: SISTRDRAMSARMVP*STRGFPKAVRDITR Trigger: ACGGGTGATGTCCCGCACGGCCTTCGGGAAGCCCCTTGTGGAGCAGGGCACCATCCTGGCAGACATTGCCCGGTCACGTGTGGAGATCGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041252.13 |
||
| CDS GCA 90 bp | CCTGCTCGATCTCCACACGTGACCGGGCAATGTCTGCCAGGATGGTaGCCTGCTCCACAAGGGGCTTCCCGAAGGCCGTGCGGGACATCA | + |
|
Preference number: 5 (lower is better) Translates to: PARSPHVTGQCLPGW*PAPQGASRRPCGTS Trigger: TGATGTCCCGCACGGCCTTCGGGAAGCCCCTTGTGGAGCAGGGCACCATCCTGGCAGACATTGCCCGGTCACGTGTGGAGATCGAGCAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041252.13 |
||
| CDS-3UTR CAA 90 bp | CCCCCAGGGCCCTGGCCCACAGAAGACAAATCCAAGAGGATGCAGGCCTGGTGCACCCGGAACCCTTCTTaGGTGGCAAAATCCCAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: PPGPWPTEDKSKRMQAWCTRNPS*VAKSQA Trigger: GGCCTGGGATTTTGCCACCAAAGAAGGGTTCCGGGT...GCACCAGGCCTGCATCCTCTTGGATTTGTCTTCTGTGGGCCAGGGCCCTGGGGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111776.6 |
||
| CDS CCA 90 bp | AGGTCTTCTATCAGCGGGGAAGGGCTCCACCTGTTGGCCGAGGCCTaGTGTCTCTGCAGCTCTGGCTCCAGGGGGTACACCTTCTGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: RSSISGEGLHLLAEA*CLCSSGSRGYTFCS Trigger: AGAACAGAAGGTGTACCCCCTGGAGCCAGAGCTGCAGAGACACCAGGCCTCGGCCAACAGGTGGAGCCCTTCCCCGCTGATAGAAGACCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041252.13 ENSMUST00000111776.6 |
||
| CDS CCA 90 bp | TCCCAGGCCAGCTCAGCCATGGACTCAGTGAGCTTTCCACTTTGTTaGGCTGTTGCTGAGCTTGCCTGGCCCACAGCCACTGTCCCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: SQASSAMDSVSFPLC*AVAELAWPTATVPG Trigger: TCCAGGGACAGTGGCTGTGGGCCAGGCAAGCTCAGCAACAGCCCAACAAAGTGGAAAGCTCACTGAGTCCATGGCTGAGCTGGCCTGGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041252.13 ENSMUST00000111776.6 |
||
| CDS TCA 90 bp | CTCAGCCATGGACTCAGTGAGCTTTCCACTTTGTTGGGCTGTTGCTaGGCTTGCCTGGCCCACAGCCACTGTCCCTGGAGAAGGCACGAG | + |
|
Preference number: 5 (lower is better) Translates to: LSHGLSELSTLLGCC*ACLAHSHCPWRRHE Trigger: CTCGTGCCTTCTCCAGGGACAGTGGCTGTGGGCCAGGCAAGCTCAGCAACAGCCCAACAAAGTGGAAAGCTCACTGAGTCCATGGCTGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041252.13 ENSMUST00000111776.6 |
||
| CDS GCA 90 bp | TGTCCCTGGAGAAGGCACGAGAACTCCGCCCGTGTCAAAAATGACTaGTCTGTAGCTTCGGCCTCCAGAATGTGTCCAGCGGAGGCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: CPWRRHENSARVKND*SVASASRMCPAEAS Trigger: GGAGGCCTCCGCTGGACACATTCTGGAGGCCGAAGCTACAGAGCAGTCATTTTTGACACGGGCGGAGTTCTCGTGCCTTCTCCAGGGACA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000041252.13 ENSMUST00000111776.6 ENSMUST00000197916.2 |
||
| CDS TCA 90 bp | CGTGCGGGACATCACCCGTGTCTTCATGAGTGCCAGGGCCCTCTCTaGATACCCAATCAACCTCATGGAGTTATGAATCCGGGCACGCCC | + |
|
Preference number: 5 (lower is better) Translates to: RAGHHPCLHECQGPL*IPNQPHGVMNPGTP Trigger: GGGCGTGCCCGGATTCATAACTCCATGAGGTTGATTGGGTATTCAGAGAGGGCCCTGGCACTCATGAAGACACGGGTGATGTCCCGCACG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041252.13 |
||
| CDS TCA 90 bp | GCCATCTCTAAAGCTGCAGCCTTATTTCCAGCCACATCCATGAGGTaGGCAGCTTTCAGCACCAGCAGCCGGGCCTGCTCGATCTCCACA | + |
|
Preference number: 5 (lower is better) Translates to: AISKAAALFPATSMR*AAFSTSSRACSIST Trigger: TGTGGAGATCGAGCAGGCCCGGCTGCTGGTGCTGAAAGCTGCTCACCTCATGGATGTGGCTGGAAATAAGGCTGCAGCTTTAGAGATGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041252.13 |
||
| CDS GCA 90 bp | ACCCAATCAACCTCATGGAGTTATGAATCCGGGCACGCCCCAGCCTaGCCTGAGCGATCTCAAAGGCTCTGCCAGGGCCCAGAATTATGT | + |
|
Preference number: 5 (lower is better) Translates to: TQSTSWSYESGHAPA*PERSQRLCQGPELC Trigger: ACATAATTCTGGGCCCTGGCAGAGCCTTTGAGATCGCTCAGGGCAGGCTGGGGCGTGCCCGGATTCATAACTCCATGAGGTTGATTGGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041252.13 ENSMUST00000131338.2 |
||
| CDS-3UTR CAA 90 bp | TCCTCCCCAGCCCAGGGAGGGTCTTTTACATCCAAACTGGGAGTTAGACGGATGACCCGGAACCCTTCTTaGGTGGCAAAATCCCAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: SSPAQGGSFTSKLGVRRMTRNPS*VAKSQA Trigger: GGCCTGGGATTTTGCCACCAAAGAAGGGTTCCGGGT...CATCCGTCTAACTCCCAGTTTGGATGTAAAAGACCCTCCCTGGGCTGGGGAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000041252.13 |
||
| CDS TCA 90 bp | TCATGGCCATCTCTAAAGCTGCAGCCTTATTTCCAGCCACATCCATaGGGTGAGCAGCTTTCAGCACCAGCAGCCGGGCCTGCTCGATCT | + |
|
Preference number: 5 (lower is better) Translates to: SWPSLKLQPYFQPHP*GEQLSAPAAGPARS Trigger: AGATCGAGCAGGCCCGGCTGCTGGTGCTGAAAGCTGCTCACCTCATGGATGTGGCTGGAAATAAGGCTGCAGCTTTAGAGATGGCCATGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041252.13 |
||
| CDS GCA 90 bp | CTCTGCAGCTCTGGCTCCAGGGGGTACACCTTCTGTTCTATAAACTaGACCAGCTGCTCATACAACTTTCTGACCGCAGGAGACAGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: LCSSGSRGYTFCSIN*TSCSYNFLTAGDRP Trigger: GGGCCTGTCTCCTGCGGTCAGAAAGTTGTATGAGCAGCTGGTGCAGTTTATAGAACAGAAGGTGTACCCCCTGGAGCCAGAGCTGCAGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041252.13 ENSMUST00000111776.6 |
||
| CDS TCA 90 bp | CTGTACTTCAGCAAAGCCACCTGGAGGATCCTCCAAACCAAACACTaGCAGAGGCCGGATGACTGTGATTCCTGGCGAGTCCATGGGAAC | + |
|
Preference number: 5 (lower is better) Translates to: LYFSKATWRILQTKH*QRPDDCDSWRVHGN Trigger: GTTCCCATGGACTCGCCAGGAATCACAGTCATCCGGCCTCTGTCAGTGTTTGGTTTGGAGGATCCTCCAGGTGGCTTTGCTGAAGTACAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041252.13 ENSMUST00000131338.2 |
||
| CDS-3UTR CAA 90 bp | TCCTTAGGAAATGAAAGTCTGGACTGGGCCTCATCAATACCTTCAGATCCTTGGGGGCTGTTGCTGAGCTaGCCTGGCCCACAGCCACTG | + |
|
Preference number: 5 (lower is better) Translates to: SLGNESLDWASSIPSDPWGLLLS*PGPQPL Trigger: CAGTGGCTGTGGGCCAGGCAAGCTCAGCAACAGCCC...CCAAGGATCTGAAGGTATTGATGAGGCCCAGTCCAGACTTTCATTTCCTAAGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111776.6 |
||
| CDS-3UTR CAA 90 bp | CCCAGGGCCCTGGCCCACAGAAGACAAATCCAAGAGGATGCAGGCCTGGTGCCTGAGTTATCTTCCTCTTaGATGGAAGCCTCGATGTTA | + |
|
Preference number: 5 (lower is better) Translates to: PRALAHRRQIQEDAGLVPELSSS*MEASML Trigger: TAACATCGAGGCTTCCATCAAAGAGGAAGATAACTC...AGGCACCAGGCCTGCATCCTCTTGGATTTGTCTTCTGTGGGCCAGGGCCCTGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111776.6 |
||
| CDS-3UTR CAA 90 bp | CTTACACTTCCACATTGCTGTTCATCACCAAGGAAGTCAGGACTGGAACTAAAAGGGCTGTTGCTGAGCTaGCCTGGCCCACAGCCACTG | + |
|
Preference number: 5 (lower is better) Translates to: LTLPHCCSSPRKSGLELKGLLLS*PGPQPL Trigger: CAGTGGCTGTGGGCCAGGCAAGCTCAGCAACAGCCC...TTTTAGTTCCAGTCCTGACTTCCTTGGTGATGAACAGCAATGTGGAAGTGTAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041252.13 |
||
| CDS GCA 90 bp | ATTCCTGGCGAGTCCATGGGAACCAAGAGCATAGATTGTTGCTGGTaGCTTGGGGCCTGTGGGTCTGTTTTTCCCATAAACACACAGAGT | + |
|
Preference number: 5 (lower is better) Translates to: IPGESMGTKSIDCCW*LGACGSVFPINTQS Trigger: ACTCTGTGTGTTTATGGGAAAAACAGACCCACAGGCCCCAAGGCACCAGCAACAATCTATGCTCTTGGTTCCCATGGACTCGCCAGGAAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041252.13 ENSMUST00000111776.6 |
||
| CDS-3UTR CAA 90 bp | GTCTGGACTGGGCCTCATCAATACCTTCAGATCCTTGGCATGTGGCAAATTCTGCAAAGTCCCTCAGCCTaGGCTTTCTCCTTGAGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: VWTGPHQYLQILGMWQILQSPSA*AFSLRS Trigger: AGACCTCAAGGAGAAAGCCAAGGCTGAGGGACTTTG...CAGAATTTGCCACATGCCAAGGATCTGAAGGTATTGATGAGGCCCAGTCCAGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111776.6 |
||
| CDS-3UTR CAA 90 bp | CCTGGCTTGCTCAGTTTTCCTTCTTATAGAACCCAGGACTACCAGTCCAGGGATAGCGCGGTCAATTACTaGATTGGCCATGGAAGGGAC | + |
|
Preference number: 5 (lower is better) Translates to: PGLLSFPSYRTQDYQSRDSAVNY*IGHGRD Trigger: GTCCCTTCCATGGCCAATCAAGTAATTGACCGCGCT...ATCCCTGGACTGGTAGTCCTGGGTTCTATAAGAAGGAAAACTGAGCAAGCCAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041252.13 |
||
| CDS TCA 90 bp | GGAGTTATCTTCCTCTTTGATGGAAGCCTCGATGTTAGAGGCATCTaGGGAGGCCACCTTTCGATCAGTCATGGCGAAGCACGAATGGAT | + |
|
Preference number: 5 (lower is better) Translates to: GVIFLFDGSLDVRGI*GGHLSISHGEARMD Trigger: ATCCATTCGTGCTTCGCCATGACTGATCGAAAGGTGGCCTCCTCAGATGCCTCTAACATCGAGGCTTCCATCAAAGAGGAAGATAACTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041252.13 ENSMUST00000111776.6 |
||
| CDS GCA 90 bp | TCTGGAAGCCAGCTGAAGCCATGTAAAGTACATGCAAAACAGAGATaGAGATTCCAGGCATGGACACTGCCCTGTGAGCTCTGTTCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: SGSQLKPCKVHAKQR*RFQAWTLPCELCSQ Trigger: CTGAGAACAGAGCTCACAGGGCAGTGTCCATGCCTGGAATCTGCATCTCTGTTTTGCATGTACTTTACATGGCTTCAGCTGGCTTCCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131338.2 |
||
| CDS CCA 90 bp | AAGCCATGTAAAGTACATGCAAAACAGAGATGCAGATTCCAGGCATaGACACTGCCCTGTGAGCTCTGTTCTCAGAGGAGACCAGTGGTT | + |
|
Preference number: 5 (lower is better) Translates to: KPCKVHAKQRCRFQA*TLPCELCSQRRPVV Trigger: AACCACTGGTCTCCTCTGAGAACAGAGCTCACAGGGCAGTGTCCATGCCTGGAATCTGCATCTCTGTTTTGCATGTACTTTACATGGCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131338.2 |
||
| CDS-3UTR CAA 90 bp | GGTTTATTCGGCTTACACTTCCACATTGCTGTTCATCACCAAGGAAGTCAGGACGTGGCTGGCATCTCTTaGAAAACCCGGAACCCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: GLFGLHFHIAVHHQGSQDVAGIS*KTRNPS Trigger: AGAAGGGTTCCGGGTTTTCAAAGAGATGCCAGCCAC...GTCCTGACTTCCTTGGTGATGAACAGCAATGTGGAAGTGTAAGCCGAATAAACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041252.13 |
||
| CDS-3UTR CAA 90 bp | GACATAGGAAGTAGACAGATTCTTTGTGTCCCGAAAGGCCCTTTTACCACAGAGCAAAGTCCCTCAGCCTaGGCTTTCTCCTTGAGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: DIGSRQILCVPKGPFTTEQSPSA*AFSLRS Trigger: AGACCTCAAGGAGAAAGCCAAGGCTGAGGGACTTTG...CTCTGTGGTAAAAGGGCCTTTCGGGACACAAAGAATCTGTCTACTTCCTATGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041252.13 |
||
| CDS-3UTR CAA 90 bp | CCCGGATTTATATCCCAGGCAGATTATAAGCCTTATACAAGTATAAGCCTTATACACAATCCTCTGGGGTaGAGAACCTTGCCCTCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: PGFISQADYKPYTSISLIHNPLG*RTLPSA Trigger: GGCTGAGGGCAAGGTTCTCAACCCCAGAGGATTGTG...TATAAGGCTTATACTTGTATAAGGCTTATAATCTGCCTGGGATATAAATCCGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131338.2 |
||
| CDS-3UTR CAA 90 bp | GACATAGGAAGTAGACAGATTCTTTGTGTCCCGAAAGGCCCTTTTACCACAGAGGAGTTATCTTCCTCTTaGATGGAAGCCTCGATGTTA | + |
|
Preference number: 5 (lower is better) Translates to: DIGSRQILCVPKGPFTTEELSSS*MEASML Trigger: TAACATCGAGGCTTCCATCAAAGAGGAAGATAACTC...CTCTGTGGTAAAAGGGCCTTTCGGGACACAAAGAATCTGTCTACTTCCTATGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041252.13 |
||
| CDS-3UTR CAA 90 bp | TATCAAACTGTAAAGACTTGTTCTCAATGTCCTCAGTTTCTACCTGTTCCACACAGAGGAGACCAGTGGTaGGAATTCCTCAGCCAGCAA | + |
|
Preference number: 5 (lower is better) Translates to: YQTVKTCSQCPQFLPVPHRGDQW*EFLSQQ Trigger: TTGCTGGCTGAGGAATTCCAACCACTGGTCTCCTCT...GTGTGGAACAGGTAGAAACTGAGGACATTGAGAACAAGTCTTTACAGTTTGATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131338.2 |
||
| CDS TCA 72 bp | CAGCACCAGCAGCCGGGCCTGCTCGATCTCCACACGTaGCCGGGCAATGTCTGCCAGGATGGTGCCCTGCTC | + |
|
Preference number: 6 (lower is better) Translates to: QHQQPGLLDLHT*PGNVCQDGALL Trigger: GAGCAGGGCACCATCCTGGCAGACATTGCCCGGTCACGTGTGGAGATCGAGCAGGCCCGGCTGCTGGTGCTG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041252.13 |
||
| CDS CCA 72 bp | ATCAGCGGGGAAGGGCTCCACCTGTTGGCCGAGGCCTaGTGTCTCTGCAGCTCTGGCTCCAGGGGGTACACC | + |
|
Preference number: 6 (lower is better) Translates to: ISGEGLHLLAEA*CLCSSGSRGYT Trigger: GGTGTACCCCCTGGAGCCAGAGCTGCAGAGACACCAGGCCTCGGCCAACAGGTGGAGCCCTTCCCCGCTGAT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041252.13 ENSMUST00000111776.6 |
||
| CDS CCA 72 bp | CGATCTCCACACGTGACCGGGCAATGTCTGCCAGGATaGTGCCCTGCTCCACAAGGGGCTTCCCGAAGGCCG | + |
|
Preference number: 6 (lower is better) Translates to: RSPHVTGQCLPG*CPAPQGASRRP Trigger: CGGCCTTCGGGAAGCCCCTTGTGGAGCAGGGCACCATCCTGGCAGACATTGCCCGGTCACGTGTGGAGATCG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041252.13 |
||
| CDS GCA 72 bp | ACCTCATGGAGTTATGAATCCGGGCACGCCCCAGCCTaGCCTGAGCGATCTCAAAGGCTCTGCCAGGGCCCA | + |
|
Preference number: 6 (lower is better) Translates to: TSWSYESGHAPA*PERSQRLCQGP Trigger: TGGGCCCTGGCAGAGCCTTTGAGATCGCTCAGGGCAGGCTGGGGCGTGCCCGGATTCATAACTCCATGAGGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041252.13 ENSMUST00000131338.2 |
||
| CDS CCA 72 bp | GAGGCCACCTTTCGATCAGTCATGGCGAAGCACGAATaGATCCTGCCCTCCAACAGTGGCACCAGCCAGCGG | + |
|
Preference number: 6 (lower is better) Translates to: EATFRSVMAKHE*ILPSNSGTSQR Trigger: CCGCTGGCTGGTGCCACTGTTGGAGGGCAGGATCCATTCGTGCTTCGCCATGACTGATCGAAAGGTGGCCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041252.13 ENSMUST00000111776.6 |
||
| CDS TCA 72 bp | TCCCGAAGGCCGTGCGGGACATCACCCGTGTCTTCATaGGTGCCAGGGCCCTCTCTGAATACCCAATCAACC | + |
|
Preference number: 6 (lower is better) Translates to: SRRPCGTSPVSS*VPGPSLNTQST Trigger: GGTTGATTGGGTATTCAGAGAGGGCCCTGGCACTCATGAAGACACGGGTGATGTCCCGCACGGCCTTCGGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041252.13 |
||
| CDS GCA 72 bp | CAGGCCTCCCTTTGCCTCATGAGAAGGGGAAGCAGCTaGTACAGTGCTGTGACCCCTCACACCCTTGGGAGT | + |
|
Preference number: 6 (lower is better) Translates to: QASLCLMRRGSS*YSAVTPHTLGS Trigger: ACTCCCAAGGGTGTGAGGGGTCACAGCACTGTAGCAGCTGCTTCCCCTTCTCATGAGGCAAAGGGAGGCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041252.13 ENSMUST00000111776.6 |
||
| CDS CCA 72 bp | GTGCCAGGGCCCTCTCTGAATACCCAATCAACCTCATaGAGTTATGAATCCGGGCACGCCCCAGCCTGCCCT | + |
|
Preference number: 6 (lower is better) Translates to: VPGPSLNTQSTS*SYESGHAPACP Trigger: AGGGCAGGCTGGGGCGTGCCCGGATTCATAACTCCATGAGGTTGATTGGGTATTCAGAGAGGGCCCTGGCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041252.13 ENSMUST00000131338.2 |
||
| CDS GCA 72 bp | AGGGGATGGTTCAGGGCCGTGGTCCTCCATGCCCAGTaGAGAGTGGAAGGCTGGAAAAGTCTTCTTACCCAC | + |
|
Preference number: 6 (lower is better) Translates to: RGWFRAVVLHAQ*RVEGWKSLLTH Trigger: GTGGGTAAGAAGACTTTTCCAGCCTTCCACTCTGCACTGGGCATGGAGGACCACGGCCCTGAACCATCCCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000041252.13 ENSMUST00000111776.6 ENSMUST00000197916.2 |
||
| CDS CCA 72 bp | AGCTTTCCACTTTGTTGGGCTGTTGCTGAGCTTGCCTaGCCCACAGCCACTGTCCCTGGAGAAGGCACGAGA | + |
|
Preference number: 6 (lower is better) Translates to: SFPLCWAVAELA*PTATVPGEGTR Trigger: TCTCGTGCCTTCTCCAGGGACAGTGGCTGTGGGCCAGGCAAGCTCAGCAACAGCCCAACAAAGTGGAAAGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041252.13 ENSMUST00000111776.6 |
||
| CDS TCA 72 bp | CTGGAGAAGGCACGAGAACTCCGCCCGTGTCAAAAATaGCTGCTCTGTAGCTTCGGCCTCCAGAATGTGTCC | + |
|
Preference number: 6 (lower is better) Translates to: LEKARELRPCQK*LLCSFGLQNVS Trigger: GGACACATTCTGGAGGCCGAAGCTACAGAGCAGTCATTTTTGACACGGGCGGAGTTCTCGTGCCTTCTCCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000041252.13 ENSMUST00000111776.6 ENSMUST00000197916.2 |
||
| CDS TCA 72 bp | AGCAAAGCCACCTGGAGGATCCTCCAAACCAAACACTaGCAGAGGCCGGATGACTGTGATTCCTGGCGAGTC | + |
|
Preference number: 6 (lower is better) Translates to: SKATWRILQTKH*QRPDDCDSWRV Trigger: GACTCGCCAGGAATCACAGTCATCCGGCCTCTGTCAGTGTTTGGTTTGGAGGATCCTCCAGGTGGCTTTGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041252.13 ENSMUST00000131338.2 |
||
| CDS TCA 72 bp | TCTCTAAAGCTGCAGCCTTATTTCCAGCCACATCCATaGGGTGAGCAGCTTTCAGCACCAGCAGCCGGGCCT | + |
|
Preference number: 6 (lower is better) Translates to: SLKLQPYFQPHP*GEQLSAPAAGP Trigger: AGGCCCGGCTGCTGGTGCTGAAAGCTGCTCACCTCATGGATGTGGCTGGAAATAAGGCTGCAGCTTTAGAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041252.13 |
||
| CDS CAA 90 bp | ATGTGCTGGGAACAAATGGTTCCTGGCTGCCACAATCCTCTGGGGTaGAGAACCTTGCCCTCAGCCACCATAAAACCTGCTCTTGGCTTC | + |
|
Preference number: 6 (lower is better) Translates to: MCWEQMVPGCHNPLG*RTLPSATIKPALGF Trigger: GAAGCCAAGAGCAGGTTTTATGGTGGCTGAGGGCAAGGTTCTCAACCCCAGAGGATTGTGGCAGCCAGGAACCATTTGTTCCCAGCACAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131338.2 |
||
| CDS CAA 72 bp | GAACAAATGGTTCCTGGCTGCCACAATCCTCTGGGGTaGAGAACCTTGCCCTCAGCCACCATAAAACCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: EQMVPGCHNPLG*RTLPSATIKPA Trigger: AGCAGGTTTTATGGTGGCTGAGGGCAAGGTTCTCAACCCCAGAGGATTGTGGCAGCCAGGAACCATTTGTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131338.2 |
||
| CDS CAA 90 bp | CTGCCAGGGCCCAGAATTATGTTTTCCTTAGGCACACGCACGTCCTaGAACTGTACTTCAGCAAAGCCACCTGGAGGATCCTCCAAACCA | + |
|
Preference number: 6 (lower is better) Translates to: LPGPRIMFSLGTRTS*NCTSAKPPGGSSKP Trigger: TGGTTTGGAGGATCCTCCAGGTGGCTTTGCTGAAGTACAGTTCAAGGACGTGCGTGTGCCTAAGGAAAACATAATTCTGGGCCCTGGCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041252.13 ENSMUST00000131338.2 |
||
| CDS TCA 72 bp | TTCCTCTTTGATGGAAGCCTCGATGTTAGAGGCATCTaGGGAGGCCACCTTTCGATCAGTCATGGCGAAGCA | + |
|
Preference number: 6 (lower is better) Translates to: FLFDGSLDVRGI*GGHLSISHGEA Trigger: TGCTTCGCCATGACTGATCGAAAGGTGGCCTCCTCAGATGCCTCTAACATCGAGGCTTCCATCAAAGAGGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041252.13 ENSMUST00000111776.6 |
||
| CDS GCA 72 bp | GAGTCCATGGGAACCAAGAGCATAGATTGTTGCTGGTaGCTTGGGGCCTGTGGGTCTGTTTTTCCCATAAAC | + |
|
Preference number: 6 (lower is better) Translates to: ESMGTKSIDCCW*LGACGSVFPIN Trigger: GTTTATGGGAAAAACAGACCCACAGGCCCCAAGGCACCAGCAACAATCTATGCTCTTGGTTCCCATGGACTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041252.13 ENSMUST00000111776.6 |
||
| CDS CCA 72 bp | CCAGGCATGGTAGGATCTGCTCAGTGTTTTGGTGGCTaGCATCTCTTTGAAAACCCGGAACCCTTCTTTGGT | + |
|
Preference number: 6 (lower is better) Translates to: PGMVGSAQCFGG*HLFENPEPFFG Trigger: ACCAAAGAAGGGTTCCGGGTTTTCAAAGAGATGCCAGCCACCAAAACACTGAGCAGATCCTACCATGCCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041252.13 ENSMUST00000111776.6 |
||
| CDS TCA 72 bp | AGACAGAGAGGTGCCCATCCCACTCTGGAAGCCAGCTaGAGCCATGTAAAGTACATGCAAAACAGAGATGCA | + |
|
Preference number: 6 (lower is better) Translates to: RQRGAHPTLEAS*SHVKYMQNRDA Trigger: TGCATCTCTGTTTTGCATGTACTTTACATGGCTTCAGCTGGCTTCCAGAGTGGGATGGGCACCTCTCTGTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131338.2 |
||
| CDS GCA 72 bp | CAGCTGAAGCCATGTAAAGTACATGCAAAACAGAGATaGAGATTCCAGGCATGGACACTGCCCTGTGAGCTC | + |
|
Preference number: 6 (lower is better) Translates to: QLKPCKVHAKQR*RFQAWTLPCEL Trigger: GAGCTCACAGGGCAGTGTCCATGCCTGGAATCTGCATCTCTGTTTTGCATGTACTTTACATGGCTTCAGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131338.2 |
||
| CDS CAA 72 bp | CCCAGAATTATGTTTTCCTTAGGCACACGCACGTCCTaGAACTGTACTTCAGCAAAGCCACCTGGAGGATCC | + |
|
Preference number: 6 (lower is better) Translates to: PRIMFSLGTRTS*NCTSAKPPGGS Trigger: GGATCCTCCAGGTGGCTTTGCTGAAGTACAGTTCAAGGACGTGCGTGTGCCTAAGGAAAACATAATTCTGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041252.13 ENSMUST00000131338.2 |
||
| CDS CCA 72 bp | AAAGTACATGCAAAACAGAGATGCAGATTCCAGGCATaGACACTGCCCTGTGAGCTCTGTTCTCAGAGGAGA | + |
|
Preference number: 6 (lower is better) Translates to: KVHAKQRCRFQA*TLPCELCSQRR Trigger: TCTCCTCTGAGAACAGAGCTCACAGGGCAGTGTCCATGCCTGGAATCTGCATCTCTGTTTTGCATGTACTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131338.2 |
||
| CDS CAA 72 bp | CGCTGCTCCAAAGGCCTGAATAGCGCGGTCAATTACTaGATTGGCCATGGAAGGGACGACCATTTTAATCAT | + |
|
Preference number: 6 (lower is better) Translates to: RCSKGLNSAVNY*IGHGRDDHFNH Trigger: ATGATTAAAATGGTCGTCCCTTCCATGGCCAATCAAGTAATTGACCGCGCTATTCAGGCCTTTGGAGCAGCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041252.13 |
||