RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ACAD10 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000029456

Ensembl transcript IDs: ENSMUST00000031412.12, ENSMUST00000111770.2

Found 221 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp ATGTATTTAATTCCAGCACGTGGAAAGCAGAGGCAGGCAGGTCTCTaGAGAGACCCCAGAGAATATCTTCTTGAAAAGACCCTAGGAGGT +
Preference number: 1 (lower is better)
Translates to: MYLIPARGKQRQAGL*RDPREYLLEKTLGG
Trigger: ACCTCCTAGGGTCTTTTCAAGAAGATATTCTCTGGGGTCTCTTCAGAGACCTGCCTGCCTCTGCTTTCCACGTGCTGGAATTAAATACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
3UTR-3UTR TCA 90 bp CCCAGAGAATATCTTCTTGAAAAGACCCTAGGAGGTTCAGGTCACAGTAACTGTTTGCTGGATAGGATGTaGGGACCACACATAGCAGAC +
Preference number: 2 (lower is better)
Translates to: PREYLLEKTLGGSGHSNCLLDRM*GPHIAD
Trigger: GTCTGCTATGTGTGGTCCTCACATCCTATCCAGCAA...ACAGTTACTGTGACCTGAACCTCCTAGGGTCTTTTCAAGAAGATATTCTCTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
3UTR TCA 72 bp ATTCCAGCACGTGGAAAGCAGAGGCAGGCAGGTCTCTaGAGAGACCCCAGAGAATATCTTCTTGAAAAGACC +
Preference number: 3 (lower is better)
Translates to: IPARGKQRQAGL*RDPREYLLEKT
Trigger: GGTCTTTTCAAGAAGATATTCTCTGGGGTCTCTTCAGAGACCTGCCTGCCTCTGCTTTCCACGTGCTGGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS-3UTR TCA 90 bp CTTGAAAAGACCCTAGGAGGTTCAGGTCACAGTAACTGTCCCAGACTGAGTTGCGGCCCCAGCCTGCCCTaGGCGATCTCAAAGCCTCGG +
Preference number: 4 (lower is better)
Translates to: LEKTLGGSGHSNCPRLSCGPSLP*AISKPR
Trigger: CCGAGGCTTTGAGATCGCTCAGGGCAGGCTGGGGCC...GCAACTCAGTCTGGGACAGTTACTGTGACCTGAACCTCCTAGGGTCTTTTCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS-3UTR CCA 90 bp CTTGAAAAGACCCTAGGAGGTTCAGGTCACAGTAACTGTCCCAGACTGAGTTGCGCTCCATGGGGCCGGTaGAGTGGGTCCCCAGCAAGC +
Preference number: 4 (lower is better)
Translates to: LEKTLGGSGHSNCPRLSCAPWGR*SGSPAS
Trigger: GCTTGCTGGGGACCCACTCCACCGGCCCCATGGAGC...GCAACTCAGTCTGGGACAGTTACTGTGACCTGAACCTCCTAGGGTCTTTTCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS-3UTR CCA 90 bp CCCAGAGAATATCTTCTTGAAAAGACCCTAGGAGGTTCAGGTCACAGTAACTGTTGGCTTCCCGCCGGCTaGGCTCCAAGCCGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: PREYLLEKTLGGSGHSNCWLPAG*APSRAG
Trigger: CCCTGCCCGGCTTGGAGCCCAGCCGGCGGGAAGCCA...ACAGTTACTGTGACCTGAACCTCCTAGGGTCTTTTCAAGAAGATATTCTCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS-3UTR CCA 90 bp GAATATCTTCTTGAAAAGACCCTAGGAGGTTCAGGTCACAGTAACTGTCCCAGATGGCTTCCCGCCGGCTaGGCTCCAAGCCGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: EYLLEKTLGGSGHSNCPRWLPAG*APSRAG
Trigger: CCCTGCCCGGCTTGGAGCCCAGCCGGCGGGAAGCCA...TCTGGGACAGTTACTGTGACCTGAACCTCCTAGGGTCTTTTCAAGAAGATATTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS-3UTR GCA 90 bp CTTGAAAAGACCCTAGGAGGTTCAGGTCACAGTAACTGTCCCAGACTGAGTTGCAGCCAGCGGGCCTTCTaGTCCTCAGTGCCATACCGC +
Preference number: 4 (lower is better)
Translates to: LEKTLGGSGHSNCPRLSCSQRAF*SSVPYR
Trigger: GCGGTATGGCACTGAGGAGCAGAAGGCCCGCTGGCT...GCAACTCAGTCTGGGACAGTTACTGTGACCTGAACCTCCTAGGGTCTTTTCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS-3UTR GCA 90 bp CTTGAAAAGACCCTAGGAGGTTCAGGTCACAGTAACTGTCCCAGACTGAGTTGCACCAGCAGCCGGGCCTaGTCGATCTCCACACGTGAC +
Preference number: 4 (lower is better)
Translates to: LEKTLGGSGHSNCPRLSCTSSRA*SISTRD
Trigger: GTCACGTGTGGAGATCGAGCAGGCCCGGCTGCTGGT...GCAACTCAGTCTGGGACAGTTACTGTGACCTGAACCTCCTAGGGTCTTTTCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS-3UTR CCA 90 bp CTTCTTGAAAAGACCCTAGGAGGTTCAGGTCACAGTAACTGTCCCAGACTGAGTCTGTCGGCCGAGGCCTaGTGTCTCTGCAGCTCTGGC +
Preference number: 4 (lower is better)
Translates to: LLEKTLGGSGHSNCPRLSLSAEA*CLCSSG
Trigger: GCCAGAGCTGCAGAGACACCAGGCCTCGGCCGACAG...ACTCAGTCTGGGACAGTTACTGTGACCTGAACCTCCTAGGGTCTTTTCAAGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS-3UTR TCA 90 bp CTTGAAAAGACCCTAGGAGGTTCAGGTCACAGTAACTGTCCCAGACTGAGTTGCTGCCTGGCCTGTGAGTaGCCGCTTGTAGACTCCCTG +
Preference number: 4 (lower is better)
Translates to: LEKTLGGSGHSNCPRLSCCLACE*PLVDSL
Trigger: CAGGGAGTCTACAAGCGGTCACTCACAGGCCAGGCA...GCAACTCAGTCTGGGACAGTTACTGTGACCTGAACCTCCTAGGGTCTTTTCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS-3UTR TCA 90 bp GAATATCTTCTTGAAAAGACCCTAGGAGGTTCAGGTCACAGTAACTGTCCCAGAGGCCCCAGCCTGCCCTaGGCGATCTCAAAGCCTCGG +
Preference number: 4 (lower is better)
Translates to: EYLLEKTLGGSGHSNCPRGPSLP*AISKPR
Trigger: CCGAGGCTTTGAGATCGCTCAGGGCAGGCTGGGGCC...TCTGGGACAGTTACTGTGACCTGAACCTCCTAGGGTCTTTTCAAGAAGATATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS-3UTR GCA 90 bp CTTCTTGAAAAGACCCTAGGAGGTTCAGGTCACAGTAACTGTCCCAGACTGAGTGGCCGTGGTCCTCCATaGCCAGTGCAGAGTGGAAGG +
Preference number: 4 (lower is better)
Translates to: LLEKTLGGSGHSNCPRLSGRGPP*PVQSGR
Trigger: CCTTCCACTCTGCACTGGGCATGGAGGACCACGGCC...ACTCAGTCTGGGACAGTTACTGTGACCTGAACCTCCTAGGGTCTTTTCAAGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS-3UTR GCA 90 bp CTTCTTGAAAAGACCCTAGGAGGTTCAGGTCACAGTAACTGTCCCAGACTGAGTAGCCAGCGGGCCTTCTaGTCCTCAGTGCCATACCGC +
Preference number: 4 (lower is better)
Translates to: LLEKTLGGSGHSNCPRLSSQRAF*SSVPYR
Trigger: GCGGTATGGCACTGAGGAGCAGAAGGCCCGCTGGCT...ACTCAGTCTGGGACAGTTACTGTGACCTGAACCTCCTAGGGTCTTTTCAAGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS-3UTR CCA 90 bp CTTCTTGAAAAGACCCTAGGAGGTTCAGGTCACAGTAACTGTCCCAGACTGAGTCGAAGCTGTCCAGGCTaGTGGCCTGCAGGTCCACAC +
Preference number: 4 (lower is better)
Translates to: LLEKTLGGSGHSNCPRLSRSCPG*WPAGPH
Trigger: GTGTGGACCTGCAGGCCACCAGCCTGGACAGCTTCG...ACTCAGTCTGGGACAGTTACTGTGACCTGAACCTCCTAGGGTCTTTTCAAGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS-3UTR TCA 90 bp CTTGAAAAGACCCTAGGAGGTTCAGGTCACAGTAACTGTCCCAGACTGAGTTGCTCAACCTTGATGGTGTaGATGCCCAGGCTGGCAGCC +
Preference number: 4 (lower is better)
Translates to: LEKTLGGSGHSNCPRLSCSTLMV*MPRLAA
Trigger: GGCTGCCAGCCTGGGCATTCACACCATCAAGGTTGA...GCAACTCAGTCTGGGACAGTTACTGTGACCTGAACCTCCTAGGGTCTTTTCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS-3UTR TCA 90 bp CTTGAAAAGACCCTAGGAGGTTCAGGTCACAGTAACTGTCCCAGACTGAGTTGCTTGTTGGGCTGTTGCTaGGCTTGCCTGGCCTGTGAG +
Preference number: 4 (lower is better)
Translates to: LEKTLGGSGHSNCPRLSCLLGCC*ACLACE
Trigger: CTCACAGGCCAGGCAAGCTCAGCAACAGCCCAACAA...GCAACTCAGTCTGGGACAGTTACTGTGACCTGAACCTCCTAGGGTCTTTTCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS-3UTR TCA 90 bp CTTCTTGAAAAGACCCTAGGAGGTTCAGGTCACAGTAACTGTCCCAGACTGAGTCCTCCCTTTGCCTCGTaGGAAGGGGAAGCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: LLEKTLGGSGHSNCPRLSPPFAS*EGEAAA
Trigger: AGCAGCTGCTTCCCCTTCTCACGAGGCAAAGGGAGG...ACTCAGTCTGGGACAGTTACTGTGACCTGAACCTCCTAGGGTCTTTTCAAGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS-3UTR TCA 90 bp CTTGAAAAGACCCTAGGAGGTTCAGGTCACAGTAACTGTCCCAGACTGAGTTGCGATGTTAGAGGCATCTaGGGAGGCCACCTGAGGCTC +
Preference number: 4 (lower is better)
Translates to: LEKTLGGSGHSNCPRLSCDVRGI*GGHLRL
Trigger: GAGCCTCAGGTGGCCTCCTCAGATGCCTCTAACATC...GCAACTCAGTCTGGGACAGTTACTGTGACCTGAACCTCCTAGGGTCTTTTCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS-3UTR TCA 90 bp CTTCTTGAAAAGACCCTAGGAGGTTCAGGTCACAGTAACTGTCCCAGACTGAGTGCACACGCACGTCCTTaGACCGTACTTCACCGTGGC +
Preference number: 4 (lower is better)
Translates to: LLEKTLGGSGHSNCPRLSAHARP*TVLHRG
Trigger: GCCACGGTGAAGTACGGTTCAAGGACGTGCGTGTGC...ACTCAGTCTGGGACAGTTACTGTGACCTGAACCTCCTAGGGTCTTTTCAAGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS-3UTR GCA 90 bp CTTCTTGAAAAGACCCTAGGAGGTTCAGGTCACAGTAACTGTCCCAGACTGAGTATAGCCTCTGAGGGCTaGAGGCTCAGCCTCTGCAGG +
Preference number: 4 (lower is better)
Translates to: LLEKTLGGSGHSNCPRLSIASEG*RLSLCR
Trigger: CCTGCAGAGGCTGAGCCTGCAGCCCTCAGAGGCTAT...ACTCAGTCTGGGACAGTTACTGTGACCTGAACCTCCTAGGGTCTTTTCAAGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS-3UTR GCA 90 bp GAATATCTTCTTGAAAAGACCCTAGGAGGTTCAGGTCACAGTAACTGTCCCAGAGGCCAGGCCCCAGCCTaGCCTGAGCGATCTCAAAGC +
Preference number: 4 (lower is better)
Translates to: EYLLEKTLGGSGHSNCPRGQAPA*PERSQS
Trigger: GCTTTGAGATCGCTCAGGGCAGGCTGGGGCCTGGCC...TCTGGGACAGTTACTGTGACCTGAACCTCCTAGGGTCTTTTCAAGAAGATATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS-3UTR GCA 90 bp CCCAGAGAATATCTTCTTGAAAAGACCCTAGGAGGTTCAGGTCACAGTAACTGTGCCAGGATGGTGCCCTaGTCCACAAGGGGCTTCCCG +
Preference number: 4 (lower is better)
Translates to: PREYLLEKTLGGSGHSNCARMVP*STRGFP
Trigger: CGGGAAGCCCCTTGTGGAGCAGGGCACCATCCTGGC...ACAGTTACTGTGACCTGAACCTCCTAGGGTCTTTTCAAGAAGATATTCTCTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS-3UTR CCA 90 bp GAATATCTTCTTGAAAAGACCCTAGGAGGTTCAGGTCACAGTAACTGTCCCAGACTGTCGGCCGAGGCCTaGTGTCTCTGCAGCTCTGGC +
Preference number: 4 (lower is better)
Translates to: EYLLEKTLGGSGHSNCPRLSAEA*CLCSSG
Trigger: GCCAGAGCTGCAGAGACACCAGGCCTCGGCCGACAG...TCTGGGACAGTTACTGTGACCTGAACCTCCTAGGGTCTTTTCAAGAAGATATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS-3UTR TCA 90 bp CTTCTTGAAAAGACCCTAGGAGGTTCAGGTCACAGTAACTGTCCCAGACTGAGTGTTCCAGAAGGGACATaGTTCTGCACCTCCCAGCCC +
Preference number: 4 (lower is better)
Translates to: LLEKTLGGSGHSNCPRLSVPEGT*FCTSQP
Trigger: GGGCTGGGAGGTGCAGAATCATGTCCCTTCTGGAAC...ACTCAGTCTGGGACAGTTACTGTGACCTGAACCTCCTAGGGTCTTTTCAAGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS-3UTR TCA 90 bp CTTCTTGAAAAGACCCTAGGAGGTTCAGGTCACAGTAACTGTCCCAGACTGAGTAGCTTGCCTGGCCTGTaGGTGACCGCTTGTAGACTC +
Preference number: 4 (lower is better)
Translates to: LLEKTLGGSGHSNCPRLSSLPGL*VTACRL
Trigger: GAGTCTACAAGCGGTCACTCACAGGCCAGGCAAGCT...ACTCAGTCTGGGACAGTTACTGTGACCTGAACCTCCTAGGGTCTTTTCAAGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS-3UTR TCA 90 bp CTTCTTGAAAAGACCCTAGGAGGTTCAGGTCACAGTAACTGTCCCAGACTGAGTAGGATCCAGGATGCCTaGGGTCCACCACTTGTGACC +
Preference number: 4 (lower is better)
Translates to: LLEKTLGGSGHSNCPRLSRIQDA*GPPLVT
Trigger: GGTCACAAGTGGTGGACCTCAGGCATCCTGGATCCT...ACTCAGTCTGGGACAGTTACTGTGACCTGAACCTCCTAGGGTCTTTTCAAGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS-3UTR GCA 90 bp CTTGAAAAGACCCTAGGAGGTTCAGGTCACAGTAACTGTCCCAGACTGAGTTGCGTCCTCCATGCCCAGTaGAGAGTGGAAGGCTGGAAA +
Preference number: 4 (lower is better)
Translates to: LEKTLGGSGHSNCPRLSCVLHAQ*RVEGWK
Trigger: TTTCCAGCCTTCCACTCTGCACTGGGCATGGAGGAC...GCAACTCAGTCTGGGACAGTTACTGTGACCTGAACCTCCTAGGGTCTTTTCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS-3UTR GCA 90 bp GAATATCTTCTTGAAAAGACCCTAGGAGGTTCAGGTCACAGTAACTGTCCCAGAGGCCGTGGTCCTCCATaGCCAGTGCAGAGTGGAAGG +
Preference number: 4 (lower is better)
Translates to: EYLLEKTLGGSGHSNCPRGRGPP*PVQSGR
Trigger: CCTTCCACTCTGCACTGGGCATGGAGGACCACGGCC...TCTGGGACAGTTACTGTGACCTGAACCTCCTAGGGTCTTTTCAAGAAGATATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS-3UTR GCA 90 bp CTTGAAAAGACCCTAGGAGGTTCAGGTCACAGTAACTGTCCCAGACTGAGTTGCAAGCAGCTGCTACAGTaGTGTGACCCCTCACACCCT +
Preference number: 4 (lower is better)
Translates to: LEKTLGGSGHSNCPRLSCKQLLQ*CDPSHP
Trigger: AGGGTGTGAGGGGTCACAGCACTGTAGCAGCTGCTT...GCAACTCAGTCTGGGACAGTTACTGTGACCTGAACCTCCTAGGGTCTTTTCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS-3UTR GCA 90 bp CTTCTTGAAAAGACCCTAGGAGGTTCAGGTCACAGTAACTGTCCCAGACTGAGTACTGCTGAGGCCCGCTaGTCCAAAGGCCTGAATAGC +
Preference number: 4 (lower is better)
Translates to: LLEKTLGGSGHSNCPRLSTAEAR*SKGLNS
Trigger: GCTATTCAGGCCTTTGGAGCAGCGGGCCTCAGCAGT...ACTCAGTCTGGGACAGTTACTGTGACCTGAACCTCCTAGGGTCTTTTCAAGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS-3UTR CCA 90 bp CTTCTTGAAAAGACCCTAGGAGGTTCAGGTCACAGTAACTGTCCCAGACTGAGTTCCCTTTCTATGGCATaGGCAGAGGGGAGGAGGGTC +
Preference number: 4 (lower is better)
Translates to: LLEKTLGGSGHSNCPRLSSLSMA*AEGRRV
Trigger: GACCCTCCTCCCCTCTGCCCATGCCATAGAAAGGGA...ACTCAGTCTGGGACAGTTACTGTGACCTGAACCTCCTAGGGTCTTTTCAAGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS-3UTR CCA 90 bp GAATATCTTCTTGAAAAGACCCTAGGAGGTTCAGGTCACAGTAACTGTCCCAGACGAAGCTGTCCAGGCTaGTGGCCTGCAGGTCCACAC +
Preference number: 4 (lower is better)
Translates to: EYLLEKTLGGSGHSNCPRRSCPG*WPAGPH
Trigger: GTGTGGACCTGCAGGCCACCAGCCTGGACAGCTTCG...TCTGGGACAGTTACTGTGACCTGAACCTCCTAGGGTCTTTTCAAGAAGATATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS-3UTR CCA 90 bp CTTCTTGAAAAGACCCTAGGAGGTTCAGGTCACAGTAACTGTCCCAGACTGAGTCCTGGGAAGGTGCAGTaGCAGCCACTGGATAAGCCT +
Preference number: 4 (lower is better)
Translates to: LLEKTLGGSGHSNCPRLSPGKVQ*QPLDKP
Trigger: AGGCTTATCCAGTGGCTGCCACTGCACCTTCCCAGG...ACTCAGTCTGGGACAGTTACTGTGACCTGAACCTCCTAGGGTCTTTTCAAGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS-3UTR TCA 90 bp CTTGAAAAGACCCTAGGAGGTTCAGGTCACAGTAACTGTCCCAGACTGAGTTGCAAGAAAAATAGCCTCTaGGGGCTGCAGGCTCAGCCT +
Preference number: 4 (lower is better)
Translates to: LEKTLGGSGHSNCPRLSCKKNSL*GLQAQP
Trigger: AGGCTGAGCCTGCAGCCCTCAGAGGCTATTTTTCTT...GCAACTCAGTCTGGGACAGTTACTGTGACCTGAACCTCCTAGGGTCTTTTCAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS-3UTR TCA 90 bp CTTGAAAAGACCCTAGGAGGTTCAGGTCACAGTAACTGTCCCAGACTGAGTTGCGGTGCCGATGATGCTTaGGTCTTCACAGAGGTCAAG +
Preference number: 4 (lower is better)
Translates to: LEKTLGGSGHSNCPRLSCGADDA*VFTEVK
Trigger: CTTGACCTCTGTGAAGACTCAAGCATCATCGGCACC...GCAACTCAGTCTGGGACAGTTACTGTGACCTGAACCTCCTAGGGTCTTTTCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS-3UTR TCA 90 bp CTTCTTGAAAAGACCCTAGGAGGTTCAGGTCACAGTAACTGTCCCAGACTGAGTAGGGGTCTTTGTAGATaGTGCCCGGGCAGTACTCCA +
Preference number: 4 (lower is better)
Translates to: LLEKTLGGSGHSNCPRLSRGLCR*CPGSTP
Trigger: TGGAGTACTGCCCGGGCATCATCTACAAAGACCCCT...ACTCAGTCTGGGACAGTTACTGTGACCTGAACCTCCTAGGGTCTTTTCAAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS-3UTR TCA 90 bp CCCAGAGAATATCTTCTTGAAAAGACCCTAGGAGGTTCAGGTCACAGTAACTGTTGCCTGGCCTGTGAGTaGCCGCTTGTAGACTCCCTG +
Preference number: 4 (lower is better)
Translates to: PREYLLEKTLGGSGHSNCCLACE*PLVDSL
Trigger: CAGGGAGTCTACAAGCGGTCACTCACAGGCCAGGCA...ACAGTTACTGTGACCTGAACCTCCTAGGGTCTTTTCAAGAAGATATTCTCTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS-3UTR TCA 90 bp GAATATCTTCTTGAAAAGACCCTAGGAGGTTCAGGTCACAGTAACTGTCCCAGAGCACACGCACGTCCTTaGACCGTACTTCACCGTGGC +
Preference number: 4 (lower is better)
Translates to: EYLLEKTLGGSGHSNCPRAHARP*TVLHRG
Trigger: GCCACGGTGAAGTACGGTTCAAGGACGTGCGTGTGC...TCTGGGACAGTTACTGTGACCTGAACCTCCTAGGGTCTTTTCAAGAAGATATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS-3UTR GCA 90 bp CTTCTTGAAAAGACCCTAGGAGGTTCAGGTCACAGTAACTGTCCCAGACTGAGTGTCCTCCATGCCCAGTaGAGAGTGGAAGGCTGGAAA +
Preference number: 4 (lower is better)
Translates to: LLEKTLGGSGHSNCPRLSVLHAQ*RVEGWK
Trigger: TTTCCAGCCTTCCACTCTGCACTGGGCATGGAGGAC...ACTCAGTCTGGGACAGTTACTGTGACCTGAACCTCCTAGGGTCTTTTCAAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS-3UTR GCA 90 bp CTTGAAAAGACCCTAGGAGGTTCAGGTCACAGTAACTGTCCCAGACTGAGTTGCGTCATCACCGGGAACTaGTTTGTCACCTGCTCACTG +
Preference number: 4 (lower is better)
Translates to: LEKTLGGSGHSNCPRLSCVITGN*FVTCSL
Trigger: CAGTGAGCAGGTGACAAAGCAGTTCCCGGTGATGAC...GCAACTCAGTCTGGGACAGTTACTGTGACCTGAACCTCCTAGGGTCTTTTCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS-3UTR GCA 90 bp CTTCTTGAAAAGACCCTAGGAGGTTCAGGTCACAGTAACTGTCCCAGACTGAGTTGCAGGCTCAGCCTCTaGAGGCACAGCTGGAATATC +
Preference number: 4 (lower is better)
Translates to: LLEKTLGGSGHSNCPRLSCRLSL*RHSWNI
Trigger: GATATTCCAGCTGTGCCTGCAGAGGCTGAGCCTGCA...ACTCAGTCTGGGACAGTTACTGTGACCTGAACCTCCTAGGGTCTTTTCAAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS-3UTR GCA 90 bp CTTCTTGAAAAGACCCTAGGAGGTTCAGGTCACAGTAACTGTCCCAGACTGAGTCCATTGCTGGGATGCTaGTGGTTTCTGCTGCTCGGT +
Preference number: 4 (lower is better)
Translates to: LLEKTLGGSGHSNCPRLSPLLGC*WFLLLG
Trigger: ACCGAGCAGCAGAAACCAGCAGCATCCCAGCAATGG...ACTCAGTCTGGGACAGTTACTGTGACCTGAACCTCCTAGGGTCTTTTCAAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS-3UTR GCA 90 bp CTTGAAAAGACCCTAGGAGGTTCAGGTCACAGTAACTGTCCCAGACTGAGTTGCTCTCCATTGCTGGGATaGTGCTGGTTTCTGCTGCTC +
Preference number: 4 (lower is better)
Translates to: LEKTLGGSGHSNCPRLSCSPLLG*CWFLLL
Trigger: GAGCAGCAGAAACCAGCAGCATCCCAGCAATGGAGA...GCAACTCAGTCTGGGACAGTTACTGTGACCTGAACCTCCTAGGGTCTTTTCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS-3UTR GCA 90 bp CCCAGAGAATATCTTCTTGAAAAGACCCTAGGAGGTTCAGGTCACAGTAACTGTTGTCTGCCAGGATGGTaGCCTGCTCCACAAGGGGCT +
Preference number: 4 (lower is better)
Translates to: PREYLLEKTLGGSGHSNCCLPGW*PAPQGA
Trigger: AGCCCCTTGTGGAGCAGGGCACCATCCTGGCAGACA...ACAGTTACTGTGACCTGAACCTCCTAGGGTCTTTTCAAGAAGATATTCTCTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS-3UTR CCA 90 bp GAATATCTTCTTGAAAAGACCCTAGGAGGTTCAGGTCACAGTAACTGTCCCAGAAGCTGTCCAGGCTGGTaGCCTGCAGGTCCACACTGT +
Preference number: 4 (lower is better)
Translates to: EYLLEKTLGGSGHSNCPRSCPGW*PAGPHC
Trigger: ACAGTGTGGACCTGCAGGCCACCAGCCTGGACAGCT...TCTGGGACAGTTACTGTGACCTGAACCTCCTAGGGTCTTTTCAAGAAGATATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS-3UTR CCA 90 bp CTTGAAAAGACCCTAGGAGGTTCAGGTCACAGTAACTGTCCCAGACTGAGTTGCAGGGGTCTCCTAAGGTaGAAAGTTCCCAGTCCAGGA +
Preference number: 4 (lower is better)
Translates to: LEKTLGGSGHSNCPRLSCRGLLR*KVPSPG
Trigger: TCCTGGACTGGGAACTTTCCACCTTAGGAGACCCCT...GCAACTCAGTCTGGGACAGTTACTGTGACCTGAACCTCCTAGGGTCTTTTCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS-3UTR TCA 90 bp GAATATCTTCTTGAAAAGACCCTAGGAGGTTCAGGTCACAGTAACTGTCCCAGAGTTCCAGAAGGGACATaGTTCTGCACCTCCCAGCCC +
Preference number: 4 (lower is better)
Translates to: EYLLEKTLGGSGHSNCPRVPEGT*FCTSQP
Trigger: GGGCTGGGAGGTGCAGAATCATGTCCCTTCTGGAAC...TCTGGGACAGTTACTGTGACCTGAACCTCCTAGGGTCTTTTCAAGAAGATATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS-3UTR TCA 90 bp CTTCTTGAAAAGACCCTAGGAGGTTCAGGTCACAGTAACTGTCCCAGACTGAGTGATGAAAGTTGTTGGTaGGGACTGCAGTCTGGAGGC +
Preference number: 4 (lower is better)
Translates to: LLEKTLGGSGHSNCPRLSDESCW*GLQSGG
Trigger: GCCTCCAGACTGCAGTCCTCACCAACAACTTTCATC...ACTCAGTCTGGGACAGTTACTGTGACCTGAACCTCCTAGGGTCTTTTCAAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS-3UTR TCA 90 bp CTTCTTGAAAAGACCCTAGGAGGTTCAGGTCACAGTAACTGTCCCAGACTGAGTTGCAGGTCCACACTGTaGATTCTGCACAGGACTTGG +
Preference number: 4 (lower is better)
Translates to: LLEKTLGGSGHSNCPRLSCRSTL*ILHRTW
Trigger: CCAAGTCCTGTGCAGAATTCACAGTGTGGACCTGCA...ACTCAGTCTGGGACAGTTACTGTGACCTGAACCTCCTAGGGTCTTTTCAAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS-3UTR TCA 90 bp CTTGAAAAGACCCTAGGAGGTTCAGGTCACAGTAACTGTCCCAGACTGAGTTGCTCACATCCTGGTCTCTaGACCCTCTCAGAATGGGAA +
Preference number: 4 (lower is better)
Translates to: LEKTLGGSGHSNCPRLSCSHPGL*TLSEWE
Trigger: TTCCCATTCTGAGAGGGTTCAGAGACCAGGATGTGA...GCAACTCAGTCTGGGACAGTTACTGTGACCTGAACCTCCTAGGGTCTTTTCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS-3UTR TCA 90 bp CCCAGAGAATATCTTCTTGAAAAGACCCTAGGAGGTTCAGGTCACAGTAACTGTTTGTTGGGCTGTTGCTaGGCTTGCCTGGCCTGTGAG +
Preference number: 4 (lower is better)
Translates to: PREYLLEKTLGGSGHSNCLLGCC*ACLACE
Trigger: CTCACAGGCCAGGCAAGCTCAGCAACAGCCCAACAA...ACAGTTACTGTGACCTGAACCTCCTAGGGTCTTTTCAAGAAGATATTCTCTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS-3UTR TCA 90 bp CCCAGAGAATATCTTCTTGAAAAGACCCTAGGAGGTTCAGGTCACAGTAACTGTAGGATCCAGGATGCCTaGGGTCCACCACTTGTGACC +
Preference number: 4 (lower is better)
Translates to: PREYLLEKTLGGSGHSNCRIQDA*GPPLVT
Trigger: GGTCACAAGTGGTGGACCTCAGGCATCCTGGATCCT...ACAGTTACTGTGACCTGAACCTCCTAGGGTCTTTTCAAGAAGATATTCTCTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS-3UTR GCA 90 bp CTTGAAAAGACCCTAGGAGGTTCAGGTCACAGTAACTGTCCCAGACTGAGTTGCGATCTGGCTTACAGATaGCTTCCAGGCAGGACTCAA +
Preference number: 4 (lower is better)
Translates to: LEKTLGGSGHSNCPRLSCDLAYR*LPGRTQ
Trigger: TTGAGTCCTGCCTGGAAGGCATCTGTAAGCCAGATC...GCAACTCAGTCTGGGACAGTTACTGTGACCTGAACCTCCTAGGGTCTTTTCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS-3UTR GCA 90 bp GAATATCTTCTTGAAAAGACCCTAGGAGGTTCAGGTCACAGTAACTGTCCCAGACTCCAGCTCCTTCACTaGTGTCTCGGGCCTGTCAAC +
Preference number: 4 (lower is better)
Translates to: EYLLEKTLGGSGHSNCPRLQLLH*CLGPVN
Trigger: GTTGACAGGCCCGAGACAGCAGTGAAGGAGCTGGAG...TCTGGGACAGTTACTGTGACCTGAACCTCCTAGGGTCTTTTCAAGAAGATATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS-3UTR GCA 90 bp CTTGAAAAGACCCTAGGAGGTTCAGGTCACAGTAACTGTCCCAGACTGAGTTGCGATAAGCCTCTCCATTaGTGGGATGCTGCTGGTTTC +
Preference number: 4 (lower is better)
Translates to: LEKTLGGSGHSNCPRLSCDKPLH*WDAAGF
Trigger: GAAACCAGCAGCATCCCAGCAATGGAGAGGCTTATC...GCAACTCAGTCTGGGACAGTTACTGTGACCTGAACCTCCTAGGGTCTTTTCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS-3UTR GCA 90 bp CCCAGAGAATATCTTCTTGAAAAGACCCTAGGAGGTTCAGGTCACAGTAACTGTACTGCTGAGGCCCGCTaGTCCAAAGGCCTGAATAGC +
Preference number: 4 (lower is better)
Translates to: PREYLLEKTLGGSGHSNCTAEAR*SKGLNS
Trigger: GCTATTCAGGCCTTTGGAGCAGCGGGCCTCAGCAGT...ACAGTTACTGTGACCTGAACCTCCTAGGGTCTTTTCAAGAAGATATTCTCTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS-3UTR CCA 90 bp CCCAGAGAATATCTTCTTGAAAAGACCCTAGGAGGTTCAGGTCACAGTAACTGTTCCCTTTCTATGGCATaGGCAGAGGGGAGGAGGGTC +
Preference number: 4 (lower is better)
Translates to: PREYLLEKTLGGSGHSNCSLSMA*AEGRRV
Trigger: GACCCTCCTCCCCTCTGCCCATGCCATAGAAAGGGA...ACAGTTACTGTGACCTGAACCTCCTAGGGTCTTTTCAAGAAGATATTCTCTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS-3UTR CCA 90 bp GAATATCTTCTTGAAAAGACCCTAGGAGGTTCAGGTCACAGTAACTGTCCCAGACCTGGGAAGGTGCAGTaGCAGCCACTGGATAAGCCT +
Preference number: 4 (lower is better)
Translates to: EYLLEKTLGGSGHSNCPRPGKVQ*QPLDKP
Trigger: AGGCTTATCCAGTGGCTGCCACTGCACCTTCCCAGG...TCTGGGACAGTTACTGTGACCTGAACCTCCTAGGGTCTTTTCAAGAAGATATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS-3UTR CCA 90 bp CTTCTTGAAAAGACCCTAGGAGGTTCAGGTCACAGTAACTGTCCCAGACTGAGTAATGGGAAAGCTGGATaGCAGGTAGTAGGCCAGGCA +
Preference number: 4 (lower is better)
Translates to: LLEKTLGGSGHSNCPRLSNGKAG*QVVGQA
Trigger: TGCCTGGCCTACTACCTGCCATCCAGCTTTCCCATT...ACTCAGTCTGGGACAGTTACTGTGACCTGAACCTCCTAGGGTCTTTTCAAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS-3UTR CCA 90 bp CTTCTTGAAAAGACCCTAGGAGGTTCAGGTCACAGTAACTGTCCCAGACTGAGTCCTGAGGCTCAGTCATaGCAAAGCAAGAACGGATCC +
Preference number: 4 (lower is better)
Translates to: LLEKTLGGSGHSNCPRLSPEAQS*QSKNGS
Trigger: GGATCCGTTCTTGCTTTGCCATGACTGAGCCTCAGG...ACTCAGTCTGGGACAGTTACTGTGACCTGAACCTCCTAGGGTCTTTTCAAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS-3UTR TCA 90 bp GAATATCTTCTTGAAAAGACCCTAGGAGGTTCAGGTCACAGTAACTGTCCCAGAAGGGGTCTTTGTAGATaGTGCCCGGGCAGTACTCCA +
Preference number: 4 (lower is better)
Translates to: EYLLEKTLGGSGHSNCPRRGLCR*CPGSTP
Trigger: TGGAGTACTGCCCGGGCATCATCTACAAAGACCCCT...TCTGGGACAGTTACTGTGACCTGAACCTCCTAGGGTCTTTTCAAGAAGATATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS-3UTR GCA 90 bp CTTCTTGAAAAGACCCTAGGAGGTTCAGGTCACAGTAACTGTCCCAGACTGAGTGGGCACGGAAGTCTTTaGGATTTCAGAGCACAGTCT +
Preference number: 4 (lower is better)
Translates to: LLEKTLGGSGHSNCPRLSGHGSL*DFRAQS
Trigger: AGACTGTGCTCTGAAATCGCAAAGACTTCCGTGCCC...ACTCAGTCTGGGACAGTTACTGTGACCTGAACCTCCTAGGGTCTTTTCAAGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS-3UTR GCA 90 bp CTTCTTGAAAAGACCCTAGGAGGTTCAGGTCACAGTAACTGTCCCAGACTGAGTAGTCTGGAGGCCTTTTaGTCTGATCTGAGAGATGGC +
Preference number: 4 (lower is better)
Translates to: LLEKTLGGSGHSNCPRLSSLEAF*SDLRDG
Trigger: GCCATCTCTCAGATCAGAGCAAAAGGCCTCCAGACT...ACTCAGTCTGGGACAGTTACTGTGACCTGAACCTCCTAGGGTCTTTTCAAGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS-3UTR GCA 90 bp GAATATCTTCTTGAAAAGACCCTAGGAGGTTCAGGTCACAGTAACTGTCCCAGATGCAGGCTCAGCCTCTaGAGGCACAGCTGGAATATC +
Preference number: 4 (lower is better)
Translates to: EYLLEKTLGGSGHSNCPRCRLSL*RHSWNI
Trigger: GATATTCCAGCTGTGCCTGCAGAGGCTGAGCCTGCA...TCTGGGACAGTTACTGTGACCTGAACCTCCTAGGGTCTTTTCAAGAAGATATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS-3UTR GCA 90 bp CTTGAAAAGACCCTAGGAGGTTCAGGTCACAGTAACTGTCCCAGACTGAGTTGCAGGGACTCCTGCATTTaGAAGGGCTTTCATGATCCT +
Preference number: 4 (lower is better)
Translates to: LEKTLGGSGHSNCPRLSCRDSCI*KGFHDP
Trigger: AGGATCATGAAAGCCCTTGCAAATGCAGGAGTCCCT...GCAACTCAGTCTGGGACAGTTACTGTGACCTGAACCTCCTAGGGTCTTTTCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS-3UTR GCA 90 bp CTTCTTGAAAAGACCCTAGGAGGTTCAGGTCACAGTAACTGTCCCAGACTGAGTAGGGACAGGGACTCCTaGATTTGCAAGGGCTTTCAT +
Preference number: 4 (lower is better)
Translates to: LLEKTLGGSGHSNCPRLSRDRDS*ICKGFH
Trigger: ATGAAAGCCCTTGCAAATGCAGGAGTCCCTGTCCCT...ACTCAGTCTGGGACAGTTACTGTGACCTGAACCTCCTAGGGTCTTTTCAAGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS-3UTR GCA 90 bp CTTGAAAAGACCCTAGGAGGTTCAGGTCACAGTAACTGTCCCAGACTGAGTTGCCCACACTGTGAATTCTaGACAGGACTTGGTTCATGG +
Preference number: 4 (lower is better)
Translates to: LEKTLGGSGHSNCPRLSCPHCEF*TGLGSW
Trigger: CCATGAACCAAGTCCTGTGCAGAATTCACAGTGTGG...GCAACTCAGTCTGGGACAGTTACTGTGACCTGAACCTCCTAGGGTCTTTTCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS-3UTR GCA 90 bp GAATATCTTCTTGAAAAGACCCTAGGAGGTTCAGGTCACAGTAACTGTCCCAGACCATTGCTGGGATGCTaGTGGTTTCTGCTGCTCGGT +
Preference number: 4 (lower is better)
Translates to: EYLLEKTLGGSGHSNCPRPLLGC*WFLLLG
Trigger: ACCGAGCAGCAGAAACCAGCAGCATCCCAGCAATGG...TCTGGGACAGTTACTGTGACCTGAACCTCCTAGGGTCTTTTCAAGAAGATATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS-3UTR GCA 90 bp CTTCTTGAAAAGACCCTAGGAGGTTCAGGTCACAGTAACTGTCCCAGACTGAGTAGGCATGGTAGGATCTaGTCAGTGTTTTGGTGGCTG +
Preference number: 4 (lower is better)
Translates to: LLEKTLGGSGHSNCPRLSRHGRI*SVFWWL
Trigger: CAGCCACCAAAACACTGAGCAGATCCTACCATGCCT...ACTCAGTCTGGGACAGTTACTGTGACCTGAACCTCCTAGGGTCTTTTCAAGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS-3UTR GCA 90 bp CCCAGAGAATATCTTCTTGAAAAGACCCTAGGAGGTTCAGGTCACAGTAACTGTAGAAGGGGAAGCAGCTaGTACAGTGCTGTGACCCCT +
Preference number: 4 (lower is better)
Translates to: PREYLLEKTLGGSGHSNCRRGSS*YSAVTP
Trigger: AGGGGTCACAGCACTGTAGCAGCTGCTTCCCCTTCT...ACAGTTACTGTGACCTGAACCTCCTAGGGTCTTTTCAAGAAGATATTCTCTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS-3UTR CCA 90 bp CTTCTTGAAAAGACCCTAGGAGGTTCAGGTCACAGTAACTGTCCCAGACTGAGTTGTGAATGCCCAGGCTaGCAGCCACTTTTAGATTGG +
Preference number: 4 (lower is better)
Translates to: LLEKTLGGSGHSNCPRLSCECPG*QPLLDW
Trigger: CCAATCTAAAAGTGGCTGCCAGCCTGGGCATTCACA...ACTCAGTCTGGGACAGTTACTGTGACCTGAACCTCCTAGGGTCTTTTCAAGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS-3UTR CCA 90 bp CTTGAAAAGACCCTAGGAGGTTCAGGTCACAGTAACTGTCCCAGACTGAGTTGCTCCGCCTTTTCAGGATaGAATATCAGGTTGTCCAGC +
Preference number: 4 (lower is better)
Translates to: LEKTLGGSGHSNCPRLSCSAFSG*NIRLSS
Trigger: GCTGGACAACCTGATATTCCATCCTGAAAAGGCGGA...GCAACTCAGTCTGGGACAGTTACTGTGACCTGAACCTCCTAGGGTCTTTTCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS-3UTR CCA 90 bp CTTGAAAAGACCCTAGGAGGTTCAGGTCACAGTAACTGTCCCAGACTGAGTTGCAGCTTTGTCACATCCTaGTCTCTGAACCCTCTCAGA +
Preference number: 4 (lower is better)
Translates to: LEKTLGGSGHSNCPRLSCSFVTS*SLNPLR
Trigger: TCTGAGAGGGTTCAGAGACCAGGATGTGACAAAGCT...GCAACTCAGTCTGGGACAGTTACTGTGACCTGAACCTCCTAGGGTCTTTTCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS-3UTR CCA 90 bp CTTCTTGAAAAGACCCTAGGAGGTTCAGGTCACAGTAACTGTCCCAGACTGAGTAGTATTCCTCCACAGTaGGGATGCCCAGCTTTGTCA +
Preference number: 4 (lower is better)
Translates to: LLEKTLGGSGHSNCPRLSSIPPQ*GCPALS
Trigger: TGACAAAGCTGGGCATCCCCACTGTGGAGGAATACT...ACTCAGTCTGGGACAGTTACTGTGACCTGAACCTCCTAGGGTCTTTTCAAGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS-3UTR TCA 90 bp GAATATCTTCTTGAAAAGACCCTAGGAGGTTCAGGTCACAGTAACTGTCCCAGAGATGAAAGTTGTTGGTaGGGACTGCAGTCTGGAGGC +
Preference number: 4 (lower is better)
Translates to: EYLLEKTLGGSGHSNCPRDESCW*GLQSGG
Trigger: GCCTCCAGACTGCAGTCCTCACCAACAACTTTCATC...TCTGGGACAGTTACTGTGACCTGAACCTCCTAGGGTCTTTTCAAGAAGATATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS-3UTR TCA 90 bp CCCAGAGAATATCTTCTTGAAAAGACCCTAGGAGGTTCAGGTCACAGTAACTGTAAGAAAAATAGCCTCTaGGGGCTGCAGGCTCAGCCT +
Preference number: 4 (lower is better)
Translates to: PREYLLEKTLGGSGHSNCKKNSL*GLQAQP
Trigger: AGGCTGAGCCTGCAGCCCTCAGAGGCTATTTTTCTT...ACAGTTACTGTGACCTGAACCTCCTAGGGTCTTTTCAAGAAGATATTCTCTGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS-3UTR TCA 90 bp CCCAGAGAATATCTTCTTGAAAAGACCCTAGGAGGTTCAGGTCACAGTAACTGTGGTGCCGATGATGCTTaGGTCTTCACAGAGGTCAAG +
Preference number: 4 (lower is better)
Translates to: PREYLLEKTLGGSGHSNCGADDA*VFTEVK
Trigger: CTTGACCTCTGTGAAGACTCAAGCATCATCGGCACC...ACAGTTACTGTGACCTGAACCTCCTAGGGTCTTTTCAAGAAGATATTCTCTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS-3UTR GCA 90 bp CTTCTTGAAAAGACCCTAGGAGGTTCAGGTCACAGTAACTGTCCCAGACTGAGTAGGGACTCCTGCATTTaGAAGGGCTTTCATGATCCT +
Preference number: 4 (lower is better)
Translates to: LLEKTLGGSGHSNCPRLSRDSCI*KGFHDP
Trigger: AGGATCATGAAAGCCCTTGCAAATGCAGGAGTCCCT...ACTCAGTCTGGGACAGTTACTGTGACCTGAACCTCCTAGGGTCTTTTCAAGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS-3UTR GCA 90 bp GAATATCTTCTTGAAAAGACCCTAGGAGGTTCAGGTCACAGTAACTGTCCCAGATCTCCATTGCTGGGATaGTGCTGGTTTCTGCTGCTC +
Preference number: 4 (lower is better)
Translates to: EYLLEKTLGGSGHSNCPRSPLLG*CWFLLL
Trigger: GAGCAGCAGAAACCAGCAGCATCCCAGCAATGGAGA...TCTGGGACAGTTACTGTGACCTGAACCTCCTAGGGTCTTTTCAAGAAGATATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS-3UTR CCA 90 bp CTTCTTGAAAAGACCCTAGGAGGTTCAGGTCACAGTAACTGTCCCAGACTGAGTTTGTCACCTGCTCACTaGTCAGCAGAGAGAAATAGG +
Preference number: 4 (lower is better)
Translates to: LLEKTLGGSGHSNCPRLSLSPAH*SAERNR
Trigger: CCTATTTCTCTCTGCTGACCAGTGAGCAGGTGACAA...ACTCAGTCTGGGACAGTTACTGTGACCTGAACCTCCTAGGGTCTTTTCAAGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS-3UTR CCA 90 bp CTTCTTGAAAAGACCCTAGGAGGTTCAGGTCACAGTAACTGTCCCAGACTGAGTGAATATCCTGGGATCTaGCTTACAGATGCCTTCCAG +
Preference number: 4 (lower is better)
Translates to: LLEKTLGGSGHSNCPRLSEYPGI*LTDAFQ
Trigger: CTGGAAGGCATCTGTAAGCCAGATCCCAGGATATTC...ACTCAGTCTGGGACAGTTACTGTGACCTGAACCTCCTAGGGTCTTTTCAAGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS-3UTR CCA 90 bp CTTCTTGAAAAGACCCTAGGAGGTTCAGGTCACAGTAACTGTCCCAGACTGAGTACAGCTGGAATATCCTaGGATCTGGCTTACAGATGC +
Preference number: 4 (lower is better)
Translates to: LLEKTLGGSGHSNCPRLSTAGIS*DLAYRC
Trigger: GCATCTGTAAGCCAGATCCCAGGATATTCCAGCTGT...ACTCAGTCTGGGACAGTTACTGTGACCTGAACCTCCTAGGGTCTTTTCAAGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS-3UTR CCA 90 bp CCCAGAGAATATCTTCTTGAAAAGACCCTAGGAGGTTCAGGTCACAGTAACTGTTGCAGTGGCAGCCACTaGATAAGCCTCTCCATTGCT +
Preference number: 4 (lower is better)
Translates to: PREYLLEKTLGGSGHSNCCSGSH*ISLSIA
Trigger: AGCAATGGAGAGGCTTATCCAGTGGCTGCCACTGCA...ACAGTTACTGTGACCTGAACCTCCTAGGGTCTTTTCAAGAAGATATTCTCTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS-3UTR CCA 90 bp CCCAGAGAATATCTTCTTGAAAAGACCCTAGGAGGTTCAGGTCACAGTAACTGTAGGGGTCTCCTAAGGTaGAAAGTTCCCAGTCCAGGA +
Preference number: 4 (lower is better)
Translates to: PREYLLEKTLGGSGHSNCRGLLR*KVPSPG
Trigger: TCCTGGACTGGGAACTTTCCACCTTAGGAGACCCCT...ACAGTTACTGTGACCTGAACCTCCTAGGGTCTTTTCAAGAAGATATTCTCTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS-3UTR CCA 90 bp GAATATCTTCTTGAAAAGACCCTAGGAGGTTCAGGTCACAGTAACTGTCCCAGAAATGGGAAAGCTGGATaGCAGGTAGTAGGCCAGGCA +
Preference number: 4 (lower is better)
Translates to: EYLLEKTLGGSGHSNCPRNGKAG*QVVGQA
Trigger: TGCCTGGCCTACTACCTGCCATCCAGCTTTCCCATT...TCTGGGACAGTTACTGTGACCTGAACCTCCTAGGGTCTTTTCAAGAAGATATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS-3UTR CCA 90 bp GAATATCTTCTTGAAAAGACCCTAGGAGGTTCAGGTCACAGTAACTGTCCCAGACCTGAGGCTCAGTCATaGCAAAGCAAGAACGGATCC +
Preference number: 4 (lower is better)
Translates to: EYLLEKTLGGSGHSNCPRPEAQS*QSKNGS
Trigger: GGATCCGTTCTTGCTTTGCCATGACTGAGCCTCAGG...TCTGGGACAGTTACTGTGACCTGAACCTCCTAGGGTCTTTTCAAGAAGATATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS-3UTR TCA 90 bp GAATATCTTCTTGAAAAGACCCTAGGAGGTTCAGGTCACAGTAACTGTCCCAGATCCCCGCTGGAAAGATaGAAGTTGTTGGTGAGGACT +
Preference number: 4 (lower is better)
Translates to: EYLLEKTLGGSGHSNCPRSPLER*KLLVRT
Trigger: AGTCCTCACCAACAACTTTCATCTTTCCAGCGGGGA...TCTGGGACAGTTACTGTGACCTGAACCTCCTAGGGTCTTTTCAAGAAGATATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS-3UTR TCA 90 bp CTTCTTGAAAAGACCCTAGGAGGTTCAGGTCACAGTAACTGTCCCAGACTGAGTGTAGTACGTTGGGTTTaGCTGTCCATGATCAAACTG +
Preference number: 4 (lower is better)
Translates to: LLEKTLGGSGHSNCPRLSVVRWV*LSMIKL
Trigger: CAGTTTGATCATGGACAGTCAAACCCAACGTACTAC...ACTCAGTCTGGGACAGTTACTGTGACCTGAACCTCCTAGGGTCTTTTCAAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS-3UTR TCA 90 bp CCCAGAGAATATCTTCTTGAAAAGACCCTAGGAGGTTCAGGTCACAGTAACTGTTCACATCCTGGTCTCTaGACCCTCTCAGAATGGGAA +
Preference number: 4 (lower is better)
Translates to: PREYLLEKTLGGSGHSNCSHPGL*TLSEWE
Trigger: TTCCCATTCTGAGAGGGTTCAGAGACCAGGATGTGA...ACAGTTACTGTGACCTGAACCTCCTAGGGTCTTTTCAAGAAGATATTCTCTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS-3UTR GCA 90 bp CCCAGAGAATATCTTCTTGAAAAGACCCTAGGAGGTTCAGGTCACAGTAACTGTAGTCTGGAGGCCTTTTaGTCTGATCTGAGAGATGGC +
Preference number: 4 (lower is better)
Translates to: PREYLLEKTLGGSGHSNCSLEAF*SDLRDG
Trigger: GCCATCTCTCAGATCAGAGCAAAAGGCCTCCAGACT...ACAGTTACTGTGACCTGAACCTCCTAGGGTCTTTTCAAGAAGATATTCTCTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS-3UTR GCA 90 bp GAATATCTTCTTGAAAAGACCCTAGGAGGTTCAGGTCACAGTAACTGTCCCAGAGATCTGGCTTACAGATaGCTTCCAGGCAGGACTCAA +
Preference number: 4 (lower is better)
Translates to: EYLLEKTLGGSGHSNCPRDLAYR*LPGRTQ
Trigger: TTGAGTCCTGCCTGGAAGGCATCTGTAAGCCAGATC...TCTGGGACAGTTACTGTGACCTGAACCTCCTAGGGTCTTTTCAAGAAGATATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS-3UTR GCA 90 bp GAATATCTTCTTGAAAAGACCCTAGGAGGTTCAGGTCACAGTAACTGTCCCAGAAGGGACAGGGACTCCTaGATTTGCAAGGGCTTTCAT +
Preference number: 4 (lower is better)
Translates to: EYLLEKTLGGSGHSNCPRRDRDS*ICKGFH
Trigger: ATGAAAGCCCTTGCAAATGCAGGAGTCCCTGTCCCT...TCTGGGACAGTTACTGTGACCTGAACCTCCTAGGGTCTTTTCAAGAAGATATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS-3UTR GCA 90 bp CCCAGAGAATATCTTCTTGAAAAGACCCTAGGAGGTTCAGGTCACAGTAACTGTGATAAGCCTCTCCATTaGTGGGATGCTGCTGGTTTC +
Preference number: 4 (lower is better)
Translates to: PREYLLEKTLGGSGHSNCDKPLH*WDAAGF
Trigger: GAAACCAGCAGCATCCCAGCAATGGAGAGGCTTATC...ACAGTTACTGTGACCTGAACCTCCTAGGGTCTTTTCAAGAAGATATTCTCTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS-3UTR GCA 90 bp GAATATCTTCTTGAAAAGACCCTAGGAGGTTCAGGTCACAGTAACTGTCCCAGAAGGCATGGTAGGATCTaGTCAGTGTTTTGGTGGCTG +
Preference number: 4 (lower is better)
Translates to: EYLLEKTLGGSGHSNCPRRHGRI*SVFWWL
Trigger: CAGCCACCAAAACACTGAGCAGATCCTACCATGCCT...TCTGGGACAGTTACTGTGACCTGAACCTCCTAGGGTCTTTTCAAGAAGATATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS-3UTR GCA 90 bp CTTGAAAAGACCCTAGGAGGTTCAGGTCACAGTAACTGTCCCAGACTGAGTTGCAAGCATACAGAGACATaGCCATCACTTCACACAGAT +
Preference number: 4 (lower is better)
Translates to: LEKTLGGSGHSNCPRLSCKHTET*PSLHTD
Trigger: ATCTGTGTGAAGTGATGGGCATGTCTCTGTATGCTT...GCAACTCAGTCTGGGACAGTTACTGTGACCTGAACCTCCTAGGGTCTTTTCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS-3UTR CCA 90 bp CCCAGAGAATATCTTCTTGAAAAGACCCTAGGAGGTTCAGGTCACAGTAACTGTTGTGAATGCCCAGGCTaGCAGCCACTTTTAGATTGG +
Preference number: 4 (lower is better)
Translates to: PREYLLEKTLGGSGHSNCCECPG*QPLLDW
Trigger: CCAATCTAAAAGTGGCTGCCAGCCTGGGCATTCACA...ACAGTTACTGTGACCTGAACCTCCTAGGGTCTTTTCAAGAAGATATTCTCTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS-3UTR CCA 90 bp CTTGAAAAGACCCTAGGAGGTTCAGGTCACAGTAACTGTCCCAGACTGAGTTGCATTCTGCACAGGACTTaGTTCATGGCAGTGTATATG +
Preference number: 4 (lower is better)
Translates to: LEKTLGGSGHSNCPRLSCILHRT*FMAVYM
Trigger: CATATACACTGCCATGAACCAAGTCCTGTGCAGAAT...GCAACTCAGTCTGGGACAGTTACTGTGACCTGAACCTCCTAGGGTCTTTTCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS-3UTR TCA 90 bp CTTCTTGAAAAGACCCTAGGAGGTTCAGGTCACAGTAACTGTCCCAGACTGAGTACTTGTGACCATTTATaGCATAGCAGCCATCTTCCT +
Preference number: 4 (lower is better)
Translates to: LLEKTLGGSGHSNCPRLSTCDHL*HSSHLP
Trigger: AGGAAGATGGCTGCTATGTCATAAATGGTCACAAGT...ACTCAGTCTGGGACAGTTACTGTGACCTGAACCTCCTAGGGTCTTTTCAAGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS-3UTR GCA 90 bp GAATATCTTCTTGAAAAGACCCTAGGAGGTTCAGGTCACAGTAACTGTCCCAGACCACACTGTGAATTCTaGACAGGACTTGGTTCATGG +
Preference number: 4 (lower is better)
Translates to: EYLLEKTLGGSGHSNCPRPHCEF*TGLGSW
Trigger: CCATGAACCAAGTCCTGTGCAGAATTCACAGTGTGG...TCTGGGACAGTTACTGTGACCTGAACCTCCTAGGGTCTTTTCAAGAAGATATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS-3UTR GCA 90 bp CTTGAAAAGACCCTAGGAGGTTCAGGTCACAGTAACTGTCCCAGACTGAGTTGCTTCTGTTCTATAAACTaGACCAGCTGCTCATACAAC +
Preference number: 4 (lower is better)
Translates to: LEKTLGGSGHSNCPRLSCFCSIN*TSCSYN
Trigger: GTTGTATGAGCAGCTGGTGCAGTTTATAGAACAGAA...GCAACTCAGTCTGGGACAGTTACTGTGACCTGAACCTCCTAGGGTCTTTTCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS-3UTR CCA 90 bp GAATATCTTCTTGAAAAGACCCTAGGAGGTTCAGGTCACAGTAACTGTCCCAGAACAGCTGGAATATCCTaGGATCTGGCTTACAGATGC +
Preference number: 4 (lower is better)
Translates to: EYLLEKTLGGSGHSNCPRTAGIS*DLAYRC
Trigger: GCATCTGTAAGCCAGATCCCAGGATATTCCAGCTGT...TCTGGGACAGTTACTGTGACCTGAACCTCCTAGGGTCTTTTCAAGAAGATATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS-3UTR CCA 90 bp GAATATCTTCTTGAAAAGACCCTAGGAGGTTCAGGTCACAGTAACTGTCCCAGAACAGGACTTGGTTCATaGCAGTGTATATGGCTTCCC +
Preference number: 4 (lower is better)
Translates to: EYLLEKTLGGSGHSNCPRTGLGS*QCIWLP
Trigger: GGGAAGCCATATACACTGCCATGAACCAAGTCCTGT...TCTGGGACAGTTACTGTGACCTGAACCTCCTAGGGTCTTTTCAAGAAGATATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS-3UTR CCA 90 bp CCCAGAGAATATCTTCTTGAAAAGACCCTAGGAGGTTCAGGTCACAGTAACTGTACAGGACTTGGTTCATaGCAGTGTATATGGCTTCCC +
Preference number: 4 (lower is better)
Translates to: PREYLLEKTLGGSGHSNCTGLGS*QCIWLP
Trigger: GGGAAGCCATATACACTGCCATGAACCAAGTCCTGT...ACAGTTACTGTGACCTGAACCTCCTAGGGTCTTTTCAAGAAGATATTCTCTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS-3UTR CCA 90 bp GAATATCTTCTTGAAAAGACCCTAGGAGGTTCAGGTCACAGTAACTGTCCCAGATCCGCCTTTTCAGGATaGAATATCAGGTTGTCCAGC +
Preference number: 4 (lower is better)
Translates to: EYLLEKTLGGSGHSNCPRSAFSG*NIRLSS
Trigger: GCTGGACAACCTGATATTCCATCCTGAAAAGGCGGA...TCTGGGACAGTTACTGTGACCTGAACCTCCTAGGGTCTTTTCAAGAAGATATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS-3UTR CCA 90 bp GAATATCTTCTTGAAAAGACCCTAGGAGGTTCAGGTCACAGTAACTGTCCCAGAAGCTTTGTCACATCCTaGTCTCTGAACCCTCTCAGA +
Preference number: 4 (lower is better)
Translates to: EYLLEKTLGGSGHSNCPRSFVTS*SLNPLR
Trigger: TCTGAGAGGGTTCAGAGACCAGGATGTGACAAAGCT...TCTGGGACAGTTACTGTGACCTGAACCTCCTAGGGTCTTTTCAAGAAGATATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS-3UTR TCA 90 bp GAATATCTTCTTGAAAAGACCCTAGGAGGTTCAGGTCACAGTAACTGTCCCAGAGTAGTACGTTGGGTTTaGCTGTCCATGATCAAACTG +
Preference number: 4 (lower is better)
Translates to: EYLLEKTLGGSGHSNCPRVVRWV*LSMIKL
Trigger: CAGTTTGATCATGGACAGTCAAACCCAACGTACTAC...TCTGGGACAGTTACTGTGACCTGAACCTCCTAGGGTCTTTTCAAGAAGATATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS-3UTR CCA 90 bp CCCAGAGAATATCTTCTTGAAAAGACCCTAGGAGGTTCAGGTCACAGTAACTGTTGCAGAGTGGAAGGCTaGAAAAGTCTTCTTACCAAC +
Preference number: 4 (lower is better)
Translates to: PREYLLEKTLGGSGHSNCCRVEG*KSLLTN
Trigger: GTTGGTAAGAAGACTTTTCCAGCCTTCCACTCTGCA...ACAGTTACTGTGACCTGAACCTCCTAGGGTCTTTTCAAGAAGATATTCTCTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS-3UTR CCA 90 bp CTTCTTGAAAAGACCCTAGGAGGTTCAGGTCACAGTAACTGTCCCAGACTGAGTCAGCCACTTTTAGATTaGATCCCAGATCATCAAGAA +
Preference number: 4 (lower is better)
Translates to: LLEKTLGGSGHSNCPRLSQPLLD*IPDHQE
Trigger: TTCTTGATGATCTGGGATCCAATCTAAAAGTGGCTG...ACTCAGTCTGGGACAGTTACTGTGACCTGAACCTCCTAGGGTCTTTTCAAGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS-3UTR TCA 90 bp GAATATCTTCTTGAAAAGACCCTAGGAGGTTCAGGTCACAGTAACTGTCCCAGAACTTGTGACCATTTATaGCATAGCAGCCATCTTCCT +
Preference number: 4 (lower is better)
Translates to: EYLLEKTLGGSGHSNCPRTCDHL*HSSHLP
Trigger: AGGAAGATGGCTGCTATGTCATAAATGGTCACAAGT...TCTGGGACAGTTACTGTGACCTGAACCTCCTAGGGTCTTTTCAAGAAGATATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS-3UTR GCA 90 bp CCCAGAGAATATCTTCTTGAAAAGACCCTAGGAGGTTCAGGTCACAGTAACTGTATAAACTGCACCAGCTaGTCATACAACTTTCTGACC +
Preference number: 4 (lower is better)
Translates to: PREYLLEKTLGGSGHSNCINCTS*SYNFLT
Trigger: GGTCAGAAAGTTGTATGAGCAGCTGGTGCAGTTTAT...ACAGTTACTGTGACCTGAACCTCCTAGGGTCTTTTCAAGAAGATATTCTCTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS-3UTR GCA 90 bp GAATATCTTCTTGAAAAGACCCTAGGAGGTTCAGGTCACAGTAACTGTCCCAGACACTTCACACAGATGTaGATATTCCACGTTAGTCAG +
Preference number: 4 (lower is better)
Translates to: EYLLEKTLGGSGHSNCPRHFTQM*IFHVSQ
Trigger: CTGACTAACGTGGAATATGCACATCTGTGTGAAGTG...TCTGGGACAGTTACTGTGACCTGAACCTCCTAGGGTCTTTTCAAGAAGATATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS-3UTR GCA 90 bp CCCAGAGAATATCTTCTTGAAAAGACCCTAGGAGGTTCAGGTCACAGTAACTGTAAGCATACAGAGACATaGCCATCACTTCACACAGAT +
Preference number: 4 (lower is better)
Translates to: PREYLLEKTLGGSGHSNCKHTET*PSLHTD
Trigger: ATCTGTGTGAAGTGATGGGCATGTCTCTGTATGCTT...ACAGTTACTGTGACCTGAACCTCCTAGGGTCTTTTCAAGAAGATATTCTCTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS-3UTR CCA 90 bp CCCAGAGAATATCTTCTTGAAAAGACCCTAGGAGGTTCAGGTCACAGTAACTGTATTCTGCACAGGACTTaGTTCATGGCAGTGTATATG +
Preference number: 4 (lower is better)
Translates to: PREYLLEKTLGGSGHSNCILHRT*FMAVYM
Trigger: CATATACACTGCCATGAACCAAGTCCTGTGCAGAAT...ACAGTTACTGTGACCTGAACCTCCTAGGGTCTTTTCAAGAAGATATTCTCTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS-3UTR GCA 90 bp GAATATCTTCTTGAAAAGACCCTAGGAGGTTCAGGTCACAGTAACTGTCCCAGATTCTGTTCTATAAACTaGACCAGCTGCTCATACAAC +
Preference number: 4 (lower is better)
Translates to: EYLLEKTLGGSGHSNCPRFCSIN*TSCSYN
Trigger: GTTGTATGAGCAGCTGGTGCAGTTTATAGAACAGAA...TCTGGGACAGTTACTGTGACCTGAACCTCCTAGGGTCTTTTCAAGAAGATATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS-3UTR CCA 90 bp GAATATCTTCTTGAAAAGACCCTAGGAGGTTCAGGTCACAGTAACTGTCCCAGACAGCCACTTTTAGATTaGATCCCAGATCATCAAGAA +
Preference number: 4 (lower is better)
Translates to: EYLLEKTLGGSGHSNCPRQPLLD*IPDHQE
Trigger: TTCTTGATGATCTGGGATCCAATCTAAAAGTGGCTG...TCTGGGACAGTTACTGTGACCTGAACCTCCTAGGGTCTTTTCAAGAAGATATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS TCA 90 bp AGCAGCTTTCAGCACCAGCAGCCGGGCCTGCTCGATCTCCACACGTaGCCGGGCAATGTCTGCCAGGATGGTGCCCTGCTCCACAAGGGG +
Preference number: 5 (lower is better)
Translates to: SSFQHQQPGLLDLHT*PGNVCQDGALLHKG
Trigger: CCCCTTGTGGAGCAGGGCACCATCCTGGCAGACATTGCCCGGTCACGTGTGGAGATCGAGCAGGCCCGGCTGCTGGTGCTGAAAGCTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS GCA 90 bp TGCCCTCCAACAGTGGCACCAGCCAGCGGGCCTTCTGCTCCTCAGTaGCATACCGCACCAGGATCTCCATATTCCCCGTATCCGGGGCAG +
Preference number: 5 (lower is better)
Translates to: CPPTVAPASGPSAPQ*HTAPGSPYSPYPGQ
Trigger: CTGCCCCGGATACGGGGAATATGGAGATCCTGGTGCGGTATGGCACTGAGGAGCAGAAGGCCCGCTGGCTGGTGCCACTGTTGGAGGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS CCA 90 bp AGGTCTTCTATCAGCGGGGAAGGGCTCCACCTGTCGGCCGAGGCCTaGTGTCTCTGCAGCTCTGGCTCCAGGGGGTACACCTTCTGTTCT +
Preference number: 5 (lower is better)
Translates to: RSSISGEGLHLSAEA*CLCSSGSRGYTFCS
Trigger: AGAACAGAAGGTGTACCCCCTGGAGCCAGAGCTGCAGAGACACCAGGCCTCGGCCGACAGGTGGAGCCCTTCCCCGCTGATAGAAGACCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS GCA 90 bp ACCCAATCAACCTCATGCAGTGATGAATCCGGCCAGGCCCCAGCCTaGCCTGAGCGATCTCAAAGCCTCGGCCAGGGCCCAGGAGTATGT +
Preference number: 5 (lower is better)
Translates to: TQSTSCSDESGQAPA*PERSQSLGQGPGVC
Trigger: ACATACTCCTGGGCCCTGGCCGAGGCTTTGAGATCGCTCAGGGCAGGCTGGGGCCTGGCCGGATTCATCACTGCATGAGGTTGATTGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS CCA 90 bp CCACACTGTGAATTCTGCACAGGACTTGGTTCATGGCAGTGTATATaGCTTCCCGCCGGCTGGGCTCCAAGCCGGGCAGGGAGGGGTCTT +
Preference number: 5 (lower is better)
Translates to: PHCEFCTGLGSWQCI*LPAGWAPSRAGRGL
Trigger: AAGACCCCTCCCTGCCCGGCTTGGAGCCCAGCCGGCGGGAAGCCATATACACTGCCATGAACCAAGTCCTGTGCAGAATTCACAGTGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS CCA 90 bp TGGCCTGCAGGTCCACACTGTGAATTCTGCACAGGACTTGGTTCATaGCAGTGTATATGGCTTCCCGCCGGCTGGGCTCCAAGCCGGGCA +
Preference number: 5 (lower is better)
Translates to: WPAGPHCEFCTGLGS*QCIWLPAGWAPSRA
Trigger: TGCCCGGCTTGGAGCCCAGCCGGCGGGAAGCCATATACACTGCCATGAACCAAGTCCTGTGCAGAATTCACAGTGTGGACCTGCAGGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS TCA 90 bp CCACTGTCCCTGGAGAAGGCACGAGAACTCCGCCCGTGTCAAAAATaGCTGCTCTGTAGCTTCGGCCTCCAGAATGTGTCCAGCGGAGGC +
Preference number: 5 (lower is better)
Translates to: PLSLEKARELRPCQK*LLCSFGLQNVSSGG
Trigger: GCCTCCGCTGGACACATTCTGGAGGCCGAAGCTACAGAGCAGTCATTTTTGACACGGGCGGAGTTCTCGTGCCTTCTCCAGGGACAGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS TCA 90 bp GGCCAGGGCCCAGGAGTATGTTTTCCTTGGGCACACGCACGTCCTTaGACCGTACTTCACCGTGGCCACCTGGAGGATCCTCCAAACCAA +
Preference number: 5 (lower is better)
Translates to: GQGPGVCFPWAHARP*TVLHRGHLEDPPNQ
Trigger: TTGGTTTGGAGGATCCTCCAGGTGGCCACGGTGAAGTACGGTTCAAGGACGTGCGTGTGCCCAAGGAAAACATACTCCTGGGCCCTGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS TCA 90 bp CGTGCGGGACATCACCCGTGTCTTCATGAGTGCCAGGGCCCTCTCTaGATACCCAATCAACCTCATGCAGTGATGAATCCGGCCAGGCCC +
Preference number: 5 (lower is better)
Translates to: RAGHHPCLHECQGPL*IPNQPHAVMNPARP
Trigger: GGGCCTGGCCGGATTCATCACTGCATGAGGTTGATTGGGTATTCAGAGAGGGCCCTGGCACTCATGAAGACACGGGTGATGTCCCGCACG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS CCA 90 bp GTCACCATGCACCAGCGTGGTTCTCTGTTGCCTGGGAAGGTGCAGTaGCAGCCACTGGATAAGCCTCTCCATTGCTGGGATGCTGCTGGT +
Preference number: 5 (lower is better)
Translates to: VTMHQRGSLLPGKVQ*QPLDKPLHCWDAAG
Trigger: ACCAGCAGCATCCCAGCAATGGAGAGGCTTATCCAGTGGCTGCCACTGCACCTTCCCAGGCAACAGAGAACCACGCTGGTGCATGGTGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS TCA 90 bp CCGTACTTCACCGTGGCCACCTGGAGGATCCTCCAAACCAAACACTaGCAGAGGCCGGATGACTGTGATTCCTGGCGAGTCCATGGGAAC +
Preference number: 5 (lower is better)
Translates to: PYFTVATWRILQTKH*QRPDDCDSWRVHGN
Trigger: GTTCCCATGGACTCGCCAGGAATCACAGTCATCCGGCCTCTGTCAGTGTTTGGTTTGGAGGATCCTCCAGGTGGCCACGGTGAAGTACGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS GCA 90 bp TTGCCTGGGAAGGTGCAGTGGCAGCCACTGGATAAGCCTCTCCATTaGTGGGATGCTGCTGGTTTCTGCTGCTCGGTACTGCTTGGTCCA +
Preference number: 5 (lower is better)
Translates to: LPGKVQWQPLDKPLH*WDAAGFCCSVLLGP
Trigger: TGGACCAAGCAGTACCGAGCAGCAGAAACCAGCAGCATCCCAGCAATGGAGAGGCTTATCCAGTGGCTGCCACTGCACCTTCCCAGGCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS GCA 90 bp CTGAAGTCACCATGCACCAGCGTGGTTCTCTGTTGCCTGGGAAGGTaGAGTGGCAGCCACTGGATAAGCCTCTCCATTGCTGGGATGCTG +
Preference number: 5 (lower is better)
Translates to: LKSPCTSVVLCCLGR*SGSHWISLSIAGML
Trigger: CAGCATCCCAGCAATGGAGAGGCTTATCCAGTGGCTGCCACTGCACCTTCCCAGGCAACAGAGAACCACGCTGGTGCATGGTGACTTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS GCA 90 bp AGGTTGTCCAGCCTGAAGTCACCATGCACCAGCGTGGTTCTCTGTTaGCTGGGAAGGTGCAGTGGCAGCCACTGGATAAGCCTCTCCATT +
Preference number: 5 (lower is better)
Translates to: RLSSLKSPCTSVVLC*LGRCSGSHWISLSI
Trigger: AATGGAGAGGCTTATCCAGTGGCTGCCACTGCACCTTCCCAGGCAACAGAGAACCACGCTGGTGCATGGTGACTTCAGGCTGGACAACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS CCA 90 bp ATGTTTTCCTTGGGCACACGCACGTCCTTGAACCGTACTTCACCGTaGCCACCTGGAGGATCCTCCAAACCAAACACTGACAGAGGCCGG +
Preference number: 5 (lower is better)
Translates to: MFSLGTRTSLNRTSP*PPGGSSKPNTDRGR
Trigger: CCGGCCTCTGTCAGTGTTTGGTTTGGAGGATCCTCCAGGTGGCCACGGTGAAGTACGGTTCAAGGACGTGCGTGTGCCCAAGGAAAACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS TCA 90 bp TCGCCACCTCTGATGAAAGCCTTCACTATAGTTCCAGAAGGGACATaGTTCTGCACCTCCCAGCCCACAGCCACTGTCCCTGGAGAAGGC +
Preference number: 5 (lower is better)
Translates to: SPPLMKAFTIVPEGT*FCTSQPTATVPGEG
Trigger: GCCTTCTCCAGGGACAGTGGCTGTGGGCTGGGAGGTGCAGAATCATGTCCCTTCTGGAACTATAGTGAAGGCTTTCATCAGAGGTGGCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS TCA 90 bp GCAATGTCTAAAGCTGCAGTCTTATTTCCGGCCACATCCATGAGGTaGGCAGCTTTCAGCACCAGCAGCCGGGCCTGCTCGATCTCCACA +
Preference number: 5 (lower is better)
Translates to: AMSKAAVLFPATSMR*AAFSTSSRACSIST
Trigger: TGTGGAGATCGAGCAGGCCCGGCTGCTGGTGCTGAAAGCTGCTCACCTCATGGATGTGGCCGGAAATAAGACTGCAGCTTTAGACATTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS GCA 90 bp CAGCCACTGGATAAGCCTCTCCATTGCTGGGATGCTGCTGGTTTCTaGTGCTCGGTACTGCTTGGTCCAGGTTTGCACCTGTCGAGGAAT +
Preference number: 5 (lower is better)
Translates to: QPLDKPLHCWDAAGF*CSVLLGPGLHLSRN
Trigger: ATTCCTCGACAGGTGCAAACCTGGACCAAGCAGTACCGAGCAGCAGAAACCAGCAGCATCCCAGCAATGGAGAGGCTTATCCAGTGGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS CCA 90 bp AGTACGTTGGGTTTGACTGTCCATGATCAAACTGAAGGAGCTCCATaGGGCCGGTGGAGTGGGTCCCCAGCAAGCCCTTCAGGTACTTCT +
Preference number: 5 (lower is better)
Translates to: STLGLTVHDQTEGAP*GRWSGSPASPSGTS
Trigger: AGAAGTACCTGAAGGGCTTGCTGGGGACCCACTCCACCGGCCCCATGGAGCTCCTTCAGTTTGATCATGGACAGTCAAACCCAACGTACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS CCA 90 bp GTCGAGGAATATAGTCCCCTTGCTTGCCGAAGCTGTCCAGGCTGGTaGCCTGCAGGTCCACACTGTGAATTCTGCACAGGACTTGGTTCA +
Preference number: 5 (lower is better)
Translates to: VEEYSPLACRSCPGW*PAGPHCEFCTGLGS
Trigger: TGAACCAAGTCCTGTGCAGAATTCACAGTGTGGACCTGCAGGCCACCAGCCTGGACAGCTTCGGCAAGCAAGGGGACTATATTCCTCGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS TCA 90 bp ATTCCTCCACAGTGGGGATGCCCAGCTTTGTCACATCCTGGTCTCTaGACCCTCTCAGAATGGGAAAGCTGGATGGCAGGTAGTAGGCCA +
Preference number: 5 (lower is better)
Translates to: IPPQWGCPALSHPGL*TLSEWESWMAGSRP
Trigger: TGGCCTACTACCTGCCATCCAGCTTTCCCATTCTGAGAGGGTTCAGAGACCAGGATGTGACAAAGCTGGGCATCCCCACTGTGGAGGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS TCA 90 bp TCTTTGATGGAAGCCTCGATGTTAGAGGCATCTGAGGAGGCCACCTaGGGCTCAGTCATGGCAAAGCAAGAACGGATCCTGCCCTCCAAC +
Preference number: 5 (lower is better)
Translates to: SLMEASMLEASEEAT*GSVMAKQERILPSN
Trigger: GTTGGAGGGCAGGATCCGTTCTTGCTTTGCCATGACTGAGCCTCAGGTGGCCTCCTCAGATGCCTCTAACATCGAGGCTTCCATCAAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS GCA 90 bp GCCTCTGCAGGCACAGCTGGAATATCCTGGGATCTGGCTTACAGATaGCTTCCAGGCAGGACTCAACCACCACATCAAACTGTTTCCGGT +
Preference number: 5 (lower is better)
Translates to: ASAGTAGISWDLAYR*LPGRTQPPHQTVSG
Trigger: ACCGGAAACAGTTTGATGTGGTGGTTGAGTCCTGCCTGGAAGGCATCTGTAAGCCAGATCCCAGGATATTCCAGCTGTGCCTGCAGAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS CCA 90 bp AGATGGCCTGAGTCATCACCGGGAACTGCTTTGTCACCTGCTCACTaGTCAGCAGAGAGAAATAGGAGCTCACGGGCACGGAAGTCTTTG +
Preference number: 5 (lower is better)
Translates to: RWPESSPGTALSPAH*SAERNRSSRARKSL
Trigger: CAAAGACTTCCGTGCCCGTGAGCTCCTATTTCTCTCTGCTGACCAGTGAGCAGGTGACAAAGCAGTTCCCGGTGATGACTCAGGCCATCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS CCA 90 bp TCTCCATTGCTGGGATGCTGCTGGTTTCTGCTGCTCGGTACTGCTTaGTCCAGGTTTGCACCTGTCGAGGAATATAGTCCCCTTGCTTGC +
Preference number: 5 (lower is better)
Translates to: SPLLGCCWFLLLGTA*SRFAPVEEYSPLAC
Trigger: GCAAGCAAGGGGACTATATTCCTCGACAGGTGCAAACCTGGACCAAGCAGTACCGAGCAGCAGAAACCAGCAGCATCCCAGCAATGGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS CCA 90 bp GAAAGTTCCCAGTCCAGGACAGCGAGCACTTCCGCCTTTTCAGGATaGAATATCAGGTTGTCCAGCCTGAAGTCACCATGCACCAGCGTG +
Preference number: 5 (lower is better)
Translates to: ESSQSRTASTSAFSG*NIRLSSLKSPCTSV
Trigger: CACGCTGGTGCATGGTGACTTCAGGCTGGACAACCTGATATTCCATCCTGAAAAGGCGGAAGTGCTCGCTGTCCTGGACTGGGAACTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS-3UTR CAA 90 bp CTTGAAAAGACCCTAGGAGGTTCAGGTCACAGTAACTGTCCCAGACTGAGTTGCCAGCGTGGTTCTCTGTaGCCTGGGAAGGTGCAGTGG +
Preference number: 5 (lower is better)
Translates to: LEKTLGGSGHSNCPRLSCQRGSL*PGKVQW
Trigger: CCACTGCACCTTCCCAGGCAACAGAGAACCACGCTG...GCAACTCAGTCTGGGACAGTTACTGTGACCTGAACCTCCTAGGGTCTTTTCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS TCA 90 bp TCCCCGAGGGTTTCTTCCTCAGGACCAGCTGACGGTCAGCCAGCCTaGTGTAGTACGTTGGGTTTGACTGTCCATGATCAAACTGAAGGA +
Preference number: 5 (lower is better)
Translates to: SPRVSSSGPADGQPA*CSTLGLTVHDQTEG
Trigger: TCCTTCAGTTTGATCATGGACAGTCAAACCCAACGTACTACATCAGGCTGGCTGACCGTCAGCTGGTCCTGAGGAAGAAACCCTCGGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS TCA 90 bp GCAGCCATCTTCCTCTTTGATGGAAGCCTCGATGTTAGAGGCATCTaGGGAGGCCACCTGAGGCTCAGTCATGGCAAAGCAAGAACGGAT +
Preference number: 5 (lower is better)
Translates to: AAIFLFDGSLDVRGI*GGHLRLSHGKARTD
Trigger: ATCCGTTCTTGCTTTGCCATGACTGAGCCTCAGGTGGCCTCCTCAGATGCCTCTAACATCGAGGCTTCCATCAAAGAGGAAGATGGCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS TCA 90 bp TCATTGCAATGTCTAAAGCTGCAGTCTTATTTCCGGCCACATCCATaGGGTGAGCAGCTTTCAGCACCAGCAGCCGGGCCTGCTCGATCT +
Preference number: 5 (lower is better)
Translates to: SLQCLKLQSYFRPHP*GEQLSAPAAGPARS
Trigger: AGATCGAGCAGGCCCGGCTGCTGGTGCTGAAAGCTGCTCACCTCATGGATGTGGCCGGAAATAAGACTGCAGCTTTAGACATTGCAATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS GCA 90 bp CCACTGGATAAGCCTCTCCATTGCTGGGATGCTGCTGGTTTCTGCTaGTCGGTACTGCTTGGTCCAGGTTTGCACCTGTCGAGGAATATA +
Preference number: 5 (lower is better)
Translates to: PLDKPLHCWDAAGFC*SVLLGPGLHLSRNI
Trigger: TATATTCCTCGACAGGTGCAAACCTGGACCAAGCAGTACCGAGCAGCAGAAACCAGCAGCATCCCAGCAATGGAGAGGCTTATCCAGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS-3UTR CAA 90 bp CTTCTTGAAAAGACCCTAGGAGGTTCAGGTCACAGTAACTGTCCCAGACTGAGTGGCACACGCACGTCCTaGAACCGTACTTCACCGTGG +
Preference number: 5 (lower is better)
Translates to: LLEKTLGGSGHSNCPRLSGTRTS*NRTSPW
Trigger: CCACGGTGAAGTACGGTTCAAGGACGTGCGTGTGCC...ACTCAGTCTGGGACAGTTACTGTGACCTGAACCTCCTAGGGTCTTTTCAAGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS GCA 90 bp AGATCATCAAGAAAAATAGCCTCTGAGGGCTGCAGGCTCAGCCTCTaGAGGCACAGCTGGAATATCCTGGGATCTGGCTTACAGATGCCT +
Preference number: 5 (lower is better)
Translates to: RSSRKIASEGCRLSL*RHSWNILGSGLQMP
Trigger: AGGCATCTGTAAGCCAGATCCCAGGATATTCCAGCTGTGCCTGCAGAGGCTGAGCCTGCAGCCCTCAGAGGCTATTTTTCTTGATGATCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS-3UTR CAA 90 bp CTTGAAAAGACCCTAGGAGGTTCAGGTCACAGTAACTGTCCCAGACTGAGTTGCAGACTCCCTGTAGGATaGCAGCCACCCGGAAAAAGG +
Preference number: 5 (lower is better)
Translates to: LEKTLGGSGHSNCPRLSCRLPVG*QPPGKR
Trigger: CCTTTTTCCGGGTGGCTGCAATCCTACAGGGAGTCT...GCAACTCAGTCTGGGACAGTTACTGTGACCTGAACCTCCTAGGGTCTTTTCAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS GCA 90 bp ACTGGTCAGCAGAGAGAAATAGGAGCTCACGGGCACGGAAGTCTTTaGGATTTCAGAGCACAGTCTCCCGAATTCTTCCAAGAAGTGCTC +
Preference number: 5 (lower is better)
Translates to: TGQQREIGAHGHGSL*DFRAQSPEFFQEVL
Trigger: GAGCACTTCTTGGAAGAATTCGGGAGACTGTGCTCTGAAATCGCAAAGACTTCCGTGCCCGTGAGCTCCTATTTCTCTCTGCTGACCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS GCA 90 bp GGAAAGATGAAAGTTGTTGGTGAGGACTGCAGTCTGGAGGCCTTTTaGTCTGATCTGAGAGATGGCCTGAGTCATCACCGGGAACTGCTT +
Preference number: 5 (lower is better)
Translates to: GKMKVVGEDCSLEAF*SDLRDGLSHHRELL
Trigger: AAGCAGTTCCCGGTGATGACTCAGGCCATCTCTCAGATCAGAGCAAAAGGCCTCCAGACTGCAGTCCTCACCAACAACTTTCATCTTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS-3UTR CAA 90 bp GAATATCTTCTTGAAAAGACCCTAGGAGGTTCAGGTCACAGTAACTGTCCCAGAGGCACACGCACGTCCTaGAACCGTACTTCACCGTGG +
Preference number: 5 (lower is better)
Translates to: EYLLEKTLGGSGHSNCPRGTRTS*NRTSPW
Trigger: CCACGGTGAAGTACGGTTCAAGGACGTGCGTGTGCC...TCTGGGACAGTTACTGTGACCTGAACCTCCTAGGGTCTTTTCAAGAAGATATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS-3UTR CAA 90 bp CTTCTTGAAAAGACCCTAGGAGGTTCAGGTCACAGTAACTGTCCCAGACTGAGTAGGAGTATGTTTTCCTaGGGCACACGCACGTCCTTG +
Preference number: 5 (lower is better)
Translates to: LLEKTLGGSGHSNCPRLSRSMFS*GTRTSL
Trigger: CAAGGACGTGCGTGTGCCCAAGGAAAACATACTCCT...ACTCAGTCTGGGACAGTTACTGTGACCTGAACCTCCTAGGGTCTTTTCAAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS-3UTR CAA 90 bp CCCAGAGAATATCTTCTTGAAAAGACCCTAGGAGGTTCAGGTCACAGTAACTGTTCACCGGGAACTGCTTaGTCACCTGCTCACTGGTCA +
Preference number: 5 (lower is better)
Translates to: PREYLLEKTLGGSGHSNCSPGTA*SPAHWS
Trigger: TGACCAGTGAGCAGGTGACAAAGCAGTTCCCGGTGA...ACAGTTACTGTGACCTGAACCTCCTAGGGTCTTTTCAAGAAGATATTCTCTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS-3UTR CAA 90 bp GAATATCTTCTTGAAAAGACCCTAGGAGGTTCAGGTCACAGTAACTGTCCCAGATCACCGGGAACTGCTTaGTCACCTGCTCACTGGTCA +
Preference number: 5 (lower is better)
Translates to: EYLLEKTLGGSGHSNCPRSPGTA*SPAHWS
Trigger: TGACCAGTGAGCAGGTGACAAAGCAGTTCCCGGTGA...TCTGGGACAGTTACTGTGACCTGAACCTCCTAGGGTCTTTTCAAGAAGATATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS-3UTR CAA 90 bp GAATATCTTCTTGAAAAGACCCTAGGAGGTTCAGGTCACAGTAACTGTCCCAGAAGACTCCCTGTAGGATaGCAGCCACCCGGAAAAAGG +
Preference number: 5 (lower is better)
Translates to: EYLLEKTLGGSGHSNCPRRLPVG*QPPGKR
Trigger: CCTTTTTCCGGGTGGCTGCAATCCTACAGGGAGTCT...TCTGGGACAGTTACTGTGACCTGAACCTCCTAGGGTCTTTTCAAGAAGATATTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS-3UTR CAA 90 bp CTTGAAAAGACCCTAGGAGGTTCAGGTCACAGTAACTGTCCCAGACTGAGTTGCCAGCCATCTTCCTCTTaGATGGAAGCCTCGATGTTA +
Preference number: 5 (lower is better)
Translates to: LEKTLGGSGHSNCPRLSCQPSSS*MEASML
Trigger: TAACATCGAGGCTTCCATCAAAGAGGAAGATGGCTG...GCAACTCAGTCTGGGACAGTTACTGTGACCTGAACCTCCTAGGGTCTTTTCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS CCA 90 bp CCGGAAAAAGGAGAAAGCCATGTAGAAGTTCCAGTTGTCGATGGGTaGGATGCCCATGTTAAGACAGTACATCCTGAAGTATTCCTCCAC +
Preference number: 5 (lower is better)
Translates to: PEKGESHVEVPVVDG*DAHVKTVHPEVFLH
Trigger: GTGGAGGAATACTTCAGGATGTACTGTCTTAACATGGGCATCCCACCCATCGACAACTGGAACTTCTACATGGCTTTCTCCTTTTTCCGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS GCA 90 bp GTCTTTGCGATTTCAGAGCACAGTCTCCCGAATTCTTCCAAGAAGTaGTCGGTCGTTATCTCTCCTTTTATAAACCTTATCCAGGGCCCA +
Preference number: 5 (lower is better)
Translates to: VFAISEHSLPNSSKK*SVVISPFINLIQGP
Trigger: TGGGCCCTGGATAAGGTTTATAAAAGGAGAGATAACGACCGAGCACTTCTTGGAAGAATTCGGGAGACTGTGCTCTGAAATCGCAAAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS-3UTR CAA 90 bp CTTGAAAAGACCCTAGGAGGTTCAGGTCACAGTAACTGTCCCAGACTGAGTTGCAATTCTGCACAGGACTaGGTTCATGGCAGTGTATAT +
Preference number: 5 (lower is better)
Translates to: LEKTLGGSGHSNCPRLSCNSAQD*VHGSVY
Trigger: ATATACACTGCCATGAACCAAGTCCTGTGCAGAATT...GCAACTCAGTCTGGGACAGTTACTGTGACCTGAACCTCCTAGGGTCTTTTCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS-3UTR CAA 90 bp CTTCTTGAAAAGACCCTAGGAGGTTCAGGTCACAGTAACTGTCCCAGACTGAGTATAAACACACAGAGTTaGCATCGAGGATCCAGGATG +
Preference number: 5 (lower is better)
Translates to: LLEKTLGGSGHSNCPRLSINTQS*HRGSRM
Trigger: CATCCTGGATCCTCGATGCAAACTCTGTGTGTTTAT...ACTCAGTCTGGGACAGTTACTGTGACCTGAACCTCCTAGGGTCTTTTCAAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS-3UTR CAA 90 bp CTTCTTGAAAAGACCCTAGGAGGTTCAGGTCACAGTAACTGTCCCAGACTGAGTAATTCTGCACAGGACTaGGTTCATGGCAGTGTATAT +
Preference number: 5 (lower is better)
Translates to: LLEKTLGGSGHSNCPRLSNSAQD*VHGSVY
Trigger: ATATACACTGCCATGAACCAAGTCCTGTGCAGAATT...ACTCAGTCTGGGACAGTTACTGTGACCTGAACCTCCTAGGGTCTTTTCAAGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS-3UTR CAA 90 bp GAATATCTTCTTGAAAAGACCCTAGGAGGTTCAGGTCACAGTAACTGTCCCAGACAGCCATCTTCCTCTTaGATGGAAGCCTCGATGTTA +
Preference number: 5 (lower is better)
Translates to: EYLLEKTLGGSGHSNCPRQPSSS*MEASML
Trigger: TAACATCGAGGCTTCCATCAAAGAGGAAGATGGCTG...TCTGGGACAGTTACTGTGACCTGAACCTCCTAGGGTCTTTTCAAGAAGATATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS-3UTR CAA 90 bp GAATATCTTCTTGAAAAGACCCTAGGAGGTTCAGGTCACAGTAACTGTCCCAGAATAAACACACAGAGTTaGCATCGAGGATCCAGGATG +
Preference number: 5 (lower is better)
Translates to: EYLLEKTLGGSGHSNCPRINTQS*HRGSRM
Trigger: CATCCTGGATCCTCGATGCAAACTCTGTGTGTTTAT...TCTGGGACAGTTACTGTGACCTGAACCTCCTAGGGTCTTTTCAAGAAGATATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS CCA 72 bp ATCAGCGGGGAAGGGCTCCACCTGTCGGCCGAGGCCTaGTGTCTCTGCAGCTCTGGCTCCAGGGGGTACACC +
Preference number: 6 (lower is better)
Translates to: ISGEGLHLSAEA*CLCSSGSRGYT
Trigger: GGTGTACCCCCTGGAGCCAGAGCTGCAGAGACACCAGGCCTCGGCCGACAGGTGGAGCCCTTCCCCGCTGAT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS GCA 72 bp ACACGTGACCGGGCAATGTCTGCCAGGATGGTGCCCTaGTCCACAAGGGGCTTCCCGAAGGCCGTGCGGGAC +
Preference number: 6 (lower is better)
Translates to: TRDRAMSARMVP*STRGFPKAVRD
Trigger: GTCCCGCACGGCCTTCGGGAAGCCCCTTGTGGAGCAGGGCACCATCCTGGCAGACATTGCCCGGTCACGTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS GCA 72 bp CTCCAGAATGTGTCCAGCGGAGGCCTCCCTGATGCCTaGCCAGGGGATGGTTCAGGGCCGTGGTCCTCCATG +
Preference number: 6 (lower is better)
Translates to: LQNVSSGGLPDA*PGDGSGPWSSM
Trigger: CATGGAGGACCACGGCCCTGAACCATCCCCTGGGCAGGCATCAGGGAGGCCTCCGCTGGACACATTCTGGAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS CCA 72 bp AAGCAGCTGCTACAGTGCTGTGACCCCTCACACCCTTaGGAGTCCTCGGGGACCTCGGTCCCGCCCAGGCAT +
Preference number: 6 (lower is better)
Translates to: KQLLQCCDPSHP*ESSGTSVPPRH
Trigger: ATGCCTGGGCGGGACCGAGGTCCCCGAGGACTCCCAAGGGTGTGAGGGGTCACAGCACTGTAGCAGCTGCTT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS GCA 72 bp CTGCCCTCCAACAGTGGCACCAGCCAGCGGGCCTTCTaGTCCTCAGTGCCATACCGCACCAGGATCTCCATA +
Preference number: 6 (lower is better)
Translates to: LPSNSGTSQRAF*SSVPYRTRISI
Trigger: TATGGAGATCCTGGTGCGGTATGGCACTGAGGAGCAGAAGGCCCGCTGGCTGGTGCCACTGTTGGAGGGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS GCA 72 bp CCTGCCCAGGGGATGGTTCAGGGCCGTGGTCCTCCATaGCCAGTGCAGAGTGGAAGGCTGGAAAAGTCTTCT +
Preference number: 6 (lower is better)
Translates to: PAQGMVQGRGPP*PVQSGRLEKSS
Trigger: AGAAGACTTTTCCAGCCTTCCACTCTGCACTGGGCATGGAGGACCACGGCCCTGAACCATCCCCTGGGCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS GCA 72 bp GTCTTCCTCACAGGCCGGGTGTTGGGAACGCCCAAGTaGAGTGGGAAACCCAGTAGAGCCTCCAGCTCCTTC +
Preference number: 6 (lower is better)
Translates to: VFLTGRVLGTPK*SGKPSRASSSF
Trigger: GAAGGAGCTGGAGGCTCTACTGGGTTTCCCACTGCACTTGGGCGTTCCCAACACCCGGCCTGTGAGGAAGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS GCA 72 bp CAGGCCTCCCTTTGCCTCGTGAGAAGGGGAAGCAGCTaGTACAGTGCTGTGACCCCTCACACCCTTGGGAGT +
Preference number: 6 (lower is better)
Translates to: QASLCLVRRGSS*YSAVTPHTLGS
Trigger: ACTCCCAAGGGTGTGAGGGGTCACAGCACTGTAGCAGCTGCTTCCCCTTCTCACGAGGCAAAGGGAGGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS GCA 72 bp GTGCCAGGGCCCTCTCTGAATACCCAATCAACCTCATaGAGTGATGAATCCGGCCAGGCCCCAGCCTGCCCT +
Preference number: 6 (lower is better)
Translates to: VPGPSLNTQSTS*SDESGQAPACP
Trigger: AGGGCAGGCTGGGGCCTGGCCGGATTCATCACTGCATGAGGTTGATTGGGTATTCAGAGAGGGCCCTGGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS CCA 72 bp GAATTCTGCACAGGACTTGGTTCATGGCAGTGTATATaGCTTCCCGCCGGCTGGGCTCCAAGCCGGGCAGGG +
Preference number: 6 (lower is better)
Translates to: EFCTGLGSWQCI*LPAGWAPSRAG
Trigger: CCCTGCCCGGCTTGGAGCCCAGCCGGCGGGAAGCCATATACACTGCCATGAACCAAGTCCTGTGCAGAATTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS CAA 90 bp CGGCCAGGGCCCAGGAGTATGTTTTCCTTGGGCACACGCACGTCCTaGAACCGTACTTCACCGTGGCCACCTGGAGGATCCTCCAAACCA +
Preference number: 6 (lower is better)
Translates to: RPGPRSMFSLGTRTS*NRTSPWPPGGSSKP
Trigger: TGGTTTGGAGGATCCTCCAGGTGGCCACGGTGAAGTACGGTTCAAGGACGTGCGTGTGCCCAAGGAAAACATACTCCTGGGCCCTGGCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS CAA 72 bp GGTCCAGGTTTGCACCTGTCGAGGAATATAGTCCCCTaGCTTGCCGAAGCTGTCCAGGCTGGTGGCCTGCAG +
Preference number: 6 (lower is better)
Translates to: GPGLHLSRNIVP*LAEAVQAGGLQ
Trigger: CTGCAGGCCACCAGCCTGGACAGCTTCGGCAAGCAAGGGGACTATATTCCTCGACAGGTGCAAACCTGGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS CAA 90 bp CAGGCTGGTGGCCTGCAGGTCCACACTGTGAATTCTGCACAGGACTaGGTTCATGGCAGTGTATATGGCTTCCCGCCGGCTGGGCTCCAA +
Preference number: 6 (lower is better)
Translates to: QAGGLQVHTVNSAQD*VHGSVYGFPPAGLQ
Trigger: TTGGAGCCCAGCCGGCGGGAAGCCATATACACTGCCATGAACCAAGTCCTGTGCAGAATTCACAGTGTGGACCTGCAGGCCACCAGCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS CAA 90 bp GTACTGCTTGGTCCAGGTTTGCACCTGTCGAGGAATATAGTCCCCTaGCTTGCCGAAGCTGTCCAGGCTGGTGGCCTGCAGGTCCACACT +
Preference number: 6 (lower is better)
Translates to: VLLGPGLHLSRNIVP*LAEAVQAGGLQVHT
Trigger: AGTGTGGACCTGCAGGCCACCAGCCTGGACAGCTTCGGCAAGCAAGGGGACTATATTCCTCGACAGGTGCAAACCTGGACCAAGCAGTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS CAA 90 bp CAGGTTGTCCAGCCTGAAGTCACCATGCACCAGCGTGGTTCTCTGTaGCCTGGGAAGGTGCAGTGGCAGCCACTGGATAAGCCTCTCCAT +
Preference number: 6 (lower is better)
Translates to: QVVQPEVTMHQRGSL*PGKVQWQPLDKPLH
Trigger: ATGGAGAGGCTTATCCAGTGGCTGCCACTGCACCTTCCCAGGCAACAGAGAACCACGCTGGTGCATGGTGACTTCAGGCTGGACAACCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS TCA 72 bp ACCGTGGCCACCTGGAGGATCCTCCAAACCAAACACTaGCAGAGGCCGGATGACTGTGATTCCTGGCGAGTC +
Preference number: 6 (lower is better)
Translates to: TVATWRILQTKH*QRPDDCDSWRV
Trigger: GACTCGCCAGGAATCACAGTCATCCGGCCTCTGTCAGTGTTTGGTTTGGAGGATCCTCCAGGTGGCCACGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS TCA 72 bp AAAGCTGCAGTCTTATTTCCGGCCACATCCATGAGGTaGGCAGCTTTCAGCACCAGCAGCCGGGCCTGCTCG +
Preference number: 6 (lower is better)
Translates to: KAAVLFPATSMR*AAFSTSSRACS
Trigger: CGAGCAGGCCCGGCTGCTGGTGCTGAAAGCTGCTCACCTCATGGATGTGGCCGGAAATAAGACTGCAGCTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS GCA 72 bp AGGTTTGCACCTGTCGAGGAATATAGTCCCCTTGCTTaGCGAAGCTGTCCAGGCTGGTGGCCTGCAGGTCCA +
Preference number: 6 (lower is better)
Translates to: RFAPVEEYSPLA*RSCPGWWPAGP
Trigger: TGGACCTGCAGGCCACCAGCCTGGACAGCTTCGGCAAGCAAGGGGACTATATTCCTCGACAGGTGCAAACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS GCA 72 bp AGCCTGAAGTCACCATGCACCAGCGTGGTTCTCTGTTaGCTGGGAAGGTGCAGTGGCAGCCACTGGATAAGC +
Preference number: 6 (lower is better)
Translates to: SLKSPCTSVVLC*LGRCSGSHWIS
Trigger: GCTTATCCAGTGGCTGCCACTGCACCTTCCCAGGCAACAGAGAACCACGCTGGTGCATGGTGACTTCAGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS CAA 72 bp CCCCAGCAAGCCCTTCAGGTACTTCTCCAAGGCATCTaGTGGAATCGCCATGGTCTTCCTCACAGGCCGGGT +
Preference number: 6 (lower is better)
Translates to: PQQALQVLLQGI*WNRHGLPHRPG
Trigger: ACCCGGCCTGTGAGGAAGACCATGGCGATTCCACAAGATGCCTTGGAGAAGTACCTGAAGGGCTTGCTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS CAA 72 bp CAGCCTGAAGTCACCATGCACCAGCGTGGTTCTCTGTaGCCTGGGAAGGTGCAGTGGCAGCCACTGGATAAG +
Preference number: 6 (lower is better)
Translates to: QPEVTMHQRGSL*PGKVQWQPLDK
Trigger: CTTATCCAGTGGCTGCCACTGCACCTTCCCAGGCAACAGAGAACCACGCTGGTGCATGGTGACTTCAGGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS CAA 72 bp CCCAGGAGTATGTTTTCCTTGGGCACACGCACGTCCTaGAACCGTACTTCACCGTGGCCACCTGGAGGATCC +
Preference number: 6 (lower is better)
Translates to: PRSMFSLGTRTS*NRTSPWPPGGS
Trigger: GGATCCTCCAGGTGGCCACGGTGAAGTACGGTTCAAGGACGTGCGTGTGCCCAAGGAAAACATACTCCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS TCA 72 bp CCAGGAGTATGTTTTCCTTGGGCACACGCACGTCCTTaGACCGTACTTCACCGTGGCCACCTGGAGGATCCT +
Preference number: 6 (lower is better)
Translates to: PGVCFPWAHARP*TVLHRGHLEDP
Trigger: AGGATCCTCCAGGTGGCCACGGTGAAGTACGGTTCAAGGACGTGCGTGTGCCCAAGGAAAACATACTCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS GCA 72 bp AGGGGATGGTTCAGGGCCGTGGTCCTCCATGCCCAGTaGAGAGTGGAAGGCTGGAAAAGTCTTCTTACCAAC +
Preference number: 6 (lower is better)
Translates to: RGWFRAVVLHAQ*RVEGWKSLLTN
Trigger: GTTGGTAAGAAGACTTTTCCAGCCTTCCACTCTGCACTGGGCATGGAGGACCACGGCCCTGAACCATCCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS GCA 72 bp AAGGTGCAGTGGCAGCCACTGGATAAGCCTCTCCATTaGTGGGATGCTGCTGGTTTCTGCTGCTCGGTACTG +
Preference number: 6 (lower is better)
Translates to: KVQWQPLDKPLH*WDAAGFCCSVL
Trigger: CAGTACCGAGCAGCAGAAACCAGCAGCATCCCAGCAATGGAGAGGCTTATCCAGTGGCTGCCACTGCACCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS CCA 72 bp ATGATTCTGCACCTCCCAGCCCACAGCCACTGTCCCTaGAGAAGGCACGAGAACTCCGCCCGTGTCAAAAAT +
Preference number: 6 (lower is better)
Translates to: MILHLPAHSHCP*RRHENSARVKN
Trigger: ATTTTTGACACGGGCGGAGTTCTCGTGCCTTCTCCAGGGACAGTGGCTGTGGGCTGGGAGGTGCAGAATCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS CCA 72 bp GAGTCATCACCGGGAACTGCTTTGTCACCTGCTCACTaGTCAGCAGAGAGAAATAGGAGCTCACGGGCACGG +
Preference number: 6 (lower is better)
Translates to: ESSPGTALSPAH*SAERNRSSRAR
Trigger: CCGTGCCCGTGAGCTCCTATTTCTCTCTGCTGACCAGTGAGCAGGTGACAAAGCAGTTCCCGGTGATGACTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS CCA 72 bp TATAGTCCCCTTGCTTGCCGAAGCTGTCCAGGCTGGTaGCCTGCAGGTCCACACTGTGAATTCTGCACAGGA +
Preference number: 6 (lower is better)
Translates to: YSPLACRSCPGW*PAGPHCEFCTG
Trigger: TCCTGTGCAGAATTCACAGTGTGGACCTGCAGGCCACCAGCCTGGACAGCTTCGGCAAGCAAGGGGACTATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS CCA 72 bp CTGGTCTCTGAACCCTCTCAGAATGGGAAAGCTGGATaGCAGGTAGTAGGCCAGGCAGCTGTAGGCCACATC +
Preference number: 6 (lower is better)
Translates to: LVSEPSQNGKAG*QVVGQAAVGHI
Trigger: GATGTGGCCTACAGCTGCCTGGCCTACTACCTGCCATCCAGCTTTCCCATTCTGAGAGGGTTCAGAGACCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS CCA 72 bp CTCATACAACTTTCTGACCGCAGGAGACAGGCCCTCTaGAGAGATGACCAGGCCTCCCTTTGCCTCGTGAGA +
Preference number: 6 (lower is better)
Translates to: LIQLSDRRRQAL*RDDQASLCLVR
Trigger: TCTCACGAGGCAAAGGGAGGCCTGGTCATCTCTCCAGAGGGCCTGTCTCCTGCGGTCAGAAAGTTGTATGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS CCA 72 bp TTGGGCACACGCACGTCCTTGAACCGTACTTCACCGTaGCCACCTGGAGGATCCTCCAAACCAAACACTGAC +
Preference number: 6 (lower is better)
Translates to: LGTRTSLNRTSP*PPGGSSKPNTD
Trigger: GTCAGTGTTTGGTTTGGAGGATCCTCCAGGTGGCCACGGTGAAGTACGGTTCAAGGACGTGCGTGTGCCCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS CAA 72 bp GGCCTGCAGGTCCACACTGTGAATTCTGCACAGGACTaGGTTCATGGCAGTGTATATGGCTTCCCGCCGGCT +
Preference number: 6 (lower is better)
Translates to: GLQVHTVNSAQD*VHGSVYGFPPA
Trigger: AGCCGGCGGGAAGCCATATACACTGCCATGAACCAAGTCCTGTGCAGAATTCACAGTGTGGACCTGCAGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS CAA 90 bp TGGGATGCTGCTGGTTTCTGCTGCTCGGTACTGCTTGGTCCAGGTTaGCACCTGTCGAGGAATATAGTCCCCTTGCTTGCCGAAGCTGTC +
Preference number: 6 (lower is better)
Translates to: WDAAGFCCSVLLGPG*HLSRNIVPLLAEAV
Trigger: GACAGCTTCGGCAAGCAAGGGGACTATATTCCTCGACAGGTGCAAACCTGGACCAAGCAGTACCGAGCAGCAGAAACCAGCAGCATCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS TCA 72 bp TGTCTAAAGCTGCAGTCTTATTTCCGGCCACATCCATaGGGTGAGCAGCTTTCAGCACCAGCAGCCGGGCCT +
Preference number: 6 (lower is better)
Translates to: CLKLQSYFRPHP*GEQLSAPAAGP
Trigger: AGGCCCGGCTGCTGGTGCTGAAAGCTGCTCACCTCATGGATGTGGCCGGAAATAAGACTGCAGCTTTAGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS GCA 72 bp AGAAGGCACGAGAACTCCGCCCGTGTCAAAAATGACTaGTCTGTAGCTTCGGCCTCCAGAATGTGTCCAGCG +
Preference number: 6 (lower is better)
Translates to: RRHENSARVKND*SVASASRMCPA
Trigger: CGCTGGACACATTCTGGAGGCCGAAGCTACAGAGCAGTCATTTTTGACACGGGCGGAGTTCTCGTGCCTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS GCA 72 bp GATAAGCCTCTCCATTGCTGGGATGCTGCTGGTTTCTaGTGCTCGGTACTGCTTGGTCCAGGTTTGCACCTG +
Preference number: 6 (lower is better)
Translates to: DKPLHCWDAAGF*CSVLLGPGLHL
Trigger: CAGGTGCAAACCTGGACCAAGCAGTACCGAGCAGCAGAAACCAGCAGCATCCCAGCAATGGAGAGGCTTATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS CCA 72 bp CAGCAAGCCCTTCAGGTACTTCTCCAAGGCATCTTGTaGAATCGCCATGGTCTTCCTCACAGGCCGGGTGTT +
Preference number: 6 (lower is better)
Translates to: QQALQVLLQGIL*NRHGLPHRPGV
Trigger: AACACCCGGCCTGTGAGGAAGACCATGGCGATTCCACAAGATGCCTTGGAGAAGTACCTGAAGGGCTTGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS CCA 72 bp AGGGCTTTCATGATCCTGAATTCCCTTTCTATGGCATaGGCAGAGGGGAGGAGGGTCCCCGAGGGTTTCTTC +
Preference number: 6 (lower is better)
Translates to: RAFMILNSLSMA*AEGRRVPEGFF
Trigger: GAAGAAACCCTCGGGGACCCTCCTCCCCTCTGCCCATGCCATAGAAAGGGAATTCAGGATCATGAAAGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS CCA 72 bp CTGGGATGCTGCTGGTTTCTGCTGCTCGGTACTGCTTaGTCCAGGTTTGCACCTGTCGAGGAATATAGTCCC +
Preference number: 6 (lower is better)
Translates to: LGCCWFLLLGTA*SRFAPVEEYSP
Trigger: GGGACTATATTCCTCGACAGGTGCAAACCTGGACCAAGCAGTACCGAGCAGCAGAAACCAGCAGCATCCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS CAA 72 bp GCTGGTTTCTGCTGCTCGGTACTGCTTGGTCCAGGTTaGCACCTGTCGAGGAATATAGTCCCCTTGCTTGCC +
Preference number: 6 (lower is better)
Translates to: AGFCCSVLLGPG*HLSRNIVPLLA
Trigger: GGCAAGCAAGGGGACTATATTCCTCGACAGGTGCAAACCTGGACCAAGCAGTACCGAGCAGCAGAAACCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS TCA 72 bp CCGCCTTTTCAGGATGGAATATCAGGTTGTCCAGCCTaGAGTCACCATGCACCAGCGTGGTTCTCTGTTGCC +
Preference number: 6 (lower is better)
Translates to: PPFQDGISGCPA*SHHAPAWFSVA
Trigger: GGCAACAGAGAACCACGCTGGTGCATGGTGACTTCAGGCTGGACAACCTGATATTCCATCCTGAAAAGGCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS GCA 72 bp CCAGGCTGGTGGCCTGCAGGTCCACACTGTGAATTCTaGACAGGACTTGGTTCATGGCAGTGTATATGGCTT +
Preference number: 6 (lower is better)
Translates to: PGWWPAGPHCEF*TGLGSWQCIWL
Trigger: AAGCCATATACACTGCCATGAACCAAGTCCTGTGCAGAATTCACAGTGTGGACCTGCAGGCCACCAGCCTGG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS CCA 72 bp TCCTCCACAGTGGGGATGCCCAGCTTTGTCACATCCTaGTCTCTGAACCCTCTCAGAATGGGAAAGCTGGAT +
Preference number: 6 (lower is better)
Translates to: SSTVGMPSFVTS*SLNPLRMGKLD
Trigger: ATCCAGCTTTCCCATTCTGAGAGGGTTCAGAGACCAGGATGTGACAAAGCTGGGCATCCCCACTGTGGAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS TCA 72 bp TTCCTCTTTGATGGAAGCCTCGATGTTAGAGGCATCTaGGGAGGCCACCTGAGGCTCAGTCATGGCAAAGCA +
Preference number: 6 (lower is better)
Translates to: FLFDGSLDVRGI*GGHLRLSHGKA
Trigger: TGCTTTGCCATGACTGAGCCTCAGGTGGCCTCCTCAGATGCCTCTAACATCGAGGCTTCCATCAAAGAGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS GCA 72 bp AAAGTTGTTGGTGAGGACTGCAGTCTGGAGGCCTTTTaGTCTGATCTGAGAGATGGCCTGAGTCATCACCGG +
Preference number: 6 (lower is better)
Translates to: KVVGEDCSLEAF*SDLRDGLSHHR
Trigger: CCGGTGATGACTCAGGCCATCTCTCAGATCAGAGCAAAAGGCCTCCAGACTGCAGTCCTCACCAACAACTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS GCA 72 bp AGGGGGTACACCTTCTGTTCTATAAACTGCACCAGCTaGTCATACAACTTTCTGACCGCAGGAGACAGGCCC +
Preference number: 6 (lower is better)
Translates to: RGYTFCSINCTS*SYNFLTAGDRP
Trigger: GGGCCTGTCTCCTGCGGTCAGAAAGTTGTATGAGCAGCTGGTGCAGTTTATAGAACAGAAGGTGTACCCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS CAA 72 bp TCTGAGAGATGGCCTGAGTCATCACCGGGAACTGCTTaGTCACCTGCTCACTGGTCAGCAGAGAGAAATAGG +
Preference number: 6 (lower is better)
Translates to: SERWPESSPGTA*SPAHWSAERNR
Trigger: CCTATTTCTCTCTGCTGACCAGTGAGCAGGTGACAAAGCAGTTCCCGGTGATGACTCAGGCCATCTCTCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS CAA 90 bp CACTGGTCAGCAGAGAGAAATAGGAGCTCACGGGCACGGAAGTCTTaGCGATTTCAGAGCACAGTCTCCCGAATTCTTCCAAGAAGTGCT +
Preference number: 6 (lower is better)
Translates to: HWSAERNRSSRARKS*RFQSTVSRILPRSA
Trigger: AGCACTTCTTGGAAGAATTCGGGAGACTGTGCTCTGAAATCGCAAAGACTTCCGTGCCCGTGAGCTCCTATTTCTCTCTGCTGACCAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS TCA 72 bp GTTTCTTCCTCAGGACCAGCTGACGGTCAGCCAGCCTaGTGTAGTACGTTGGGTTTGACTGTCCATGATCAA +
Preference number: 6 (lower is better)
Translates to: VSSSGPADGQPA*CSTLGLTVHDQ
Trigger: TTGATCATGGACAGTCAAACCCAACGTACTACATCAGGCTGGCTGACCGTCAGCTGGTCCTGAGGAAGAAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS CAA 72 bp GCAGAGAGAAATAGGAGCTCACGGGCACGGAAGTCTTaGCGATTTCAGAGCACAGTCTCCCGAATTCTTCCA +
Preference number: 6 (lower is better)
Translates to: AERNRSSRARKS*RFQSTVSRILP
Trigger: TGGAAGAATTCGGGAGACTGTGCTCTGAAATCGCAAAGACTTCCGTGCCCGTGAGCTCCTATTTCTCTCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS GCA 72 bp CAGAGAGAAATAGGAGCTCACGGGCACGGAAGTCTTTaGGATTTCAGAGCACAGTCTCCCGAATTCTTCCAA +
Preference number: 6 (lower is better)
Translates to: QREIGAHGHGSL*DFRAQSPEFFQ
Trigger: TTGGAAGAATTCGGGAGACTGTGCTCTGAAATCGCAAAGACTTCCGTGCCCGTGAGCTCCTATTTCTCTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS GCA 72 bp TTCCCCGCTGGAAAGATGAAAGTTGTTGGTGAGGACTaGAGTCTGGAGGCCTTTTGCTCTGATCTGAGAGAT +
Preference number: 6 (lower is better)
Translates to: FPAGKMKVVGED*SLEAFCSDLRD
Trigger: ATCTCTCAGATCAGAGCAAAAGGCCTCCAGACTGCAGTCCTCACCAACAACTTTCATCTTTCCAGCGGGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS GCA 72 bp TTCACAGAGGTCAAGAACAGTAGGGACAGGGACTCCTaGATTTGCAAGGGCTTTCATGATCCTGAATTCCCT +
Preference number: 6 (lower is better)
Translates to: FTEVKNSRDRDS*ICKGFHDPEFP
Trigger: AGGGAATTCAGGATCATGAAAGCCCTTGCAAATGCAGGAGTCCCTGTCCCTACTGTTCTTGACCTCTGTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS GCA 72 bp GAGGTCAAGAACAGTAGGGACAGGGACTCCTGCATTTaGAAGGGCTTTCATGATCCTGAATTCCCTTTCTAT +
Preference number: 6 (lower is better)
Translates to: EVKNSRDRDSCI*KGFHDPEFPFY
Trigger: ATAGAAAGGGAATTCAGGATCATGAAAGCCCTTGCAAATGCAGGAGTCCCTGTCCCTACTGTTCTTGACCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS CCA 72 bp GGAGAAAGCCATGTAGAAGTTCCAGTTGTCGATGGGTaGGATGCCCATGTTAAGACAGTACATCCTGAAGTA +
Preference number: 6 (lower is better)
Translates to: GESHVEVPVVDG*DAHVKTVHPEV
Trigger: TACTTCAGGATGTACTGTCTTAACATGGGCATCCCACCCATCGACAACTGGAACTTCTACATGGCTTTCTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2
CDS GCA 72 bp ATTTCAGAGCACAGTCTCCCGAATTCTTCCAAGAAGTaGTCGGTCGTTATCTCTCCTTTTATAAACCTTATC +
Preference number: 6 (lower is better)
Translates to: ISEHSLPNSSKK*SVVISPFINLI
Trigger: GATAAGGTTTATAAAAGGAGAGATAACGACCGAGCACTTCTTGGAAGAATTCGGGAGACTGTGCTCTGAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031412.12
ENSMUST00000111770.2