RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ACACB (Mus musculus)

Ensembl gene IDs: ENSMUSG00000042010

Ensembl transcript IDs: ENSMUST00000031583.15, ENSMUST00000102582.8, ENSMUST00000146841.2

Found 675 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TGCACTCAGGCAGTAGGGCACTCAGTACCCTGTGGGTGGCCAATCTaGAGGAGGCACGGAGGTCCAGTCCTTGCTCCACTTGGGAAGAGA +
Preference number: 1 (lower is better)
Translates to: CTQAVGHSVPCGWPI*RRHGGPVLAPLGKR
Trigger: TCTCTTCCCAAGTGGAGCAAGGACTGGACCTCCGTGCCTCCTGCAGATTGGCCACCCACAGGGTACTGAGTGCCCTACTGCCTGAGTGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
3UTR CCA 90 bp TGCAGCTCTTTCAGCAGCCTCTTCAGCGCACCCAAGTGGTCAGGGTaGCAGCCAGTGTCGGTCTGGGCTTTCCTCCACATCAAGAGGACC +
Preference number: 1 (lower is better)
Translates to: CSSFSSLFSAPKWSG*QPVSVWAFLHIKRT
Trigger: GGTCCTCTTGATGTGGAGGAAAGCCCAGACCGACACTGGCTGCCACCCTGACCACTTGGGTGCGCTGAAGAGGCTGCTGAAAGAGCTGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
3UTR GCA 90 bp AGTATATTGGCCAGAGGTTCTGGGAGGGGTGAGGGACAGCCTCTCTaGACTCAGGCAGTAGGGCACTCAGTACCCTGTGGGTGGCCAATC +
Preference number: 1 (lower is better)
Translates to: SILARGSGRGEGQPL*TQAVGHSVPCGWPI
Trigger: GATTGGCCACCCACAGGGTACTGAGTGCCCTACTGCCTGAGTGCAGAGAGGCTGTCCCTCACCCCTCCCAGAACCTCTGGCCAATATACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
3UTR CCA 90 bp CTCTTCAGCGCACCCAAGTGGTCAGGGTGGCAGCCAGTGTCGGTCTaGGCTTTCCTCCACATCAAGAGGACCTTGCCCAGAAGAACCCTT +
Preference number: 1 (lower is better)
Translates to: LFSAPKWSGWQPVSV*AFLHIKRTLPRRTL
Trigger: AAGGGTTCTTCTGGGCAAGGTCCTCTTGATGTGGAGGAAAGCCCAGACCGACACTGGCTGCCACCCTGACCACTTGGGTGCGCTGAAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
3UTR CCA 90 bp GTTGGCTCCTGCCGTGGTATCAAGGCACAAGGTGAGGAAGTATATTaGCCAGAGGTTCTGGGAGGGGTGAGGGACAGCCTCTCTGCACTC +
Preference number: 1 (lower is better)
Translates to: VGSCRGIKAQGEEVY*PEVLGGVRDSLSAL
Trigger: GAGTGCAGAGAGGCTGTCCCTCACCCCTCCCAGAACCTCTGGCCAATATACTTCCTCACCTTGTGCCTTGATACCACGGCAGGAGCCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
3UTR CCA 90 bp ACAAGGAACTCGGTGTGCCTGGTTCAGTTGGCCTCAGAGAGGCAGTaGCAGAATTATCCACTGGGACAAACCCTGAAGTCCCCAGGTGAG +
Preference number: 1 (lower is better)
Translates to: TRNSVCLVQLASERQ*QNYPLGQTLKSPGE
Trigger: CTCACCTGGGGACTTCAGGGTTTGTCCCAGTGGATAATTCTGCCACTGCCTCTCTGAGGCCAACTGAACCAGGCACACCGAGTTCCTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
3UTR TCA 90 bp TTACAGAGCCTGGGAACCGAGGCAGTAACTCTCCTCCAGCCATGCTaGATGCTAGGTGTCCTGTCTGTTTGTCCTTTATCTCTGGAGAAC +
Preference number: 1 (lower is better)
Translates to: LQSLGTEAVTLLQPC*MLGVLSVCPLSLEN
Trigger: GTTCTCCAGAGATAAAGGACAAACAGACAGGACACCTAGCATTCAGCATGGCTGGAGGAGAGTTACTGCCTCGGTTCCCAGGCTCTGTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
3UTR-3UTR TCA 90 bp CTCTTCAGCGCACCCAAGTGGTCAGGGTGGCAGCCAGTGTCGGTCTGGGCTTTCCCTGAAGTCCCCAGGTaGGGAGAGGCTGGGCCCGCC +
Preference number: 2 (lower is better)
Translates to: LFSAPKWSGWQPVSVWAFPEVPR*GEAGPA
Trigger: GGCGGGCCCAGCCTCTCCTCACCTGGGGACTTCAGG...GAAAGCCCAGACCGACACTGGCTGCCACCCTGACCACTTGGGTGCGCTGAAGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
3UTR-3UTR CCA 90 bp TCAGGCAGTAGGGCACTCAGTACCCTGTGGGTGGCCAATCTGCAGGAGGCACGGCAGGTGAGGAGAGGCTaGGCCCGCCTTAGCAGGGGC +
Preference number: 2 (lower is better)
Translates to: SGSRALSTLWVANLQEARQVRRG*ARLSRG
Trigger: GCCCCTGCTAAGGCGGGCCCAGCCTCTCCTCACCTG...CCGTGCCTCCTGCAGATTGGCCACCCACAGGGTACTGAGTGCCCTACTGCCTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
3UTR-3UTR GCA 90 bp CAGCAGCCTCTTCAGCGCACCCAAGTGGTCAGGGTGGCAGCCAGTGTCGGTCTGGAGGGACAGCCTCTCTaGACTCAGGCAGTAGGGCAC +
Preference number: 2 (lower is better)
Translates to: QQPLQRTQVVRVAASVGLEGQPL*TQAVGH
Trigger: GTGCCCTACTGCCTGAGTGCAGAGAGGCTGTCCCTC...CAGACCGACACTGGCTGCCACCCTGACCACTTGGGTGCGCTGAAGAGGCTGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
3UTR-3UTR CCA 90 bp GCTGCGGTGCCTGGCAGTGCTGGGAAAGTCTCTGTAAGCGGATCCAGAGTGTTCCGAAGGCCTGCCGCATaGCCATCCCACCGTCCAGGG +
Preference number: 2 (lower is better)
Translates to: AAVPGSAGKVSVSGSRVFRRPAA*PSHRPG
Trigger: CCCTGGACGGTGGGATGGCCATGCGGCAGGCCTTCG...GAACACTCTGGATCCGCTTACAGAGACTTTCCCAGCACTGCCAGGCACCGCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
3UTR-3UTR CCA 90 bp GAGCCTGGGAACCGAGGCAGTAACTCTCCTCCAGCCATGCTGAATGCTAGGTGTCGAAGGCCTGCCGCATaGCCATCCCACCGTCCAGGG +
Preference number: 2 (lower is better)
Translates to: EPGNRGSNSPPAMLNARCRRPAA*PSHRPG
Trigger: CCCTGGACGGTGGGATGGCCATGCGGCAGGCCTTCG...ACACCTAGCATTCAGCATGGCTGGAGGAGAGTTACTGCCTCGGTTCCCAGGCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
3UTR-3UTR TCA 90 bp GCCTGGTTCAGTTGGCCTCAGAGAGGCAGTGGCAGAATTATCCACTGGGACAAACCTGAAGTCCCCAGGTaGGGAGAGGCTGGGCCCGCC +
Preference number: 2 (lower is better)
Translates to: AWFSWPQRGSGRIIHWDKPEVPR*GEAGPA
Trigger: GGCGGGCCCAGCCTCTCCTCACCTGGGGACTTCAGG...TTTGTCCCAGTGGATAATTCTGCCACTGCCTCTCTGAGGCCAACTGAACCAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
3UTR-3UTR GCA 90 bp CTCTTCAGCGCACCCAAGTGGTCAGGGTGGCAGCCAGTGTCGGTCTGGGCTTTCCGGAGGTCCAGTCCTTaGTCCACTTGGGAAGAGAGG +
Preference number: 2 (lower is better)
Translates to: LFSAPKWSGWQPVSVWAFRRSSP*STWEER
Trigger: CCTCTCTTCCCAAGTGGAGCAAGGACTGGACCTCCG...GAAAGCCCAGACCGACACTGGCTGCCACCCTGACCACTTGGGTGCGCTGAAGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
3UTR-3UTR CCA 90 bp AATTATCCACTGGGACAAACCCTGAAGTCCCCAGGTGAGGAGAGGCTGGGCCCGCACCGTCCAGGGTCCTaGGGATGGCCAGAGTTGCTC +
Preference number: 2 (lower is better)
Translates to: NYPLGQTLKSPGEERLGPHRPGS*GWPELL
Trigger: GAGCAACTCTGGCCATCCCCAGGACCCTGGACGGTG...CGGGCCCAGCCTCTCCTCACCTGGGGACTTCAGGGTTTGTCCCAGTGGATAATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
3UTR-3UTR CCA 90 bp TCAGGCAGTAGGGCACTCAGTACCCTGTGGGTGGCCAATCTGCAGGAGGCACGGTGTGCCTGGTTCAGTTaGCCTCAGAGAGGCAGTGGC +
Preference number: 2 (lower is better)
Translates to: SGSRALSTLWVANLQEARCAWFS*PQRGSG
Trigger: GCCACTGCCTCTCTGAGGCCAACTGAACCAGGCACA...CCGTGCCTCCTGCAGATTGGCCACCCACAGGGTACTGAGTGCCCTACTGCCTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
3UTR-3UTR CCA 90 bp CAGCAGCCTCTTCAGCGCACCCAAGTGGTCAGGGTGGCAGCCAGTGTCGGTCTGGGAACTCGGTGTGCCTaGTTCAGTTGGCCTCAGAGA +
Preference number: 2 (lower is better)
Translates to: QQPLQRTQVVRVAASVGLGTRCA*FSWPQR
Trigger: TCTCTGAGGCCAACTGAACCAGGCACACCGAGTTCC...CAGACCGACACTGGCTGCCACCCTGACCACTTGGGTGCGCTGAAGAGGCTGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
3UTR-3UTR GCA 90 bp TCTTTCAGCAGCCTCTTCAGCGCACCCAAGTGGTCAGGGTGGCAGCCAGTGTCGCGGAGGTCCAGTCCTTaGTCCACTTGGGAAGAGAGG +
Preference number: 2 (lower is better)
Translates to: SFSSLFSAPKWSGWQPVSRRSSP*STWEER
Trigger: CCTCTCTTCCCAAGTGGAGCAAGGACTGGACCTCCG...CGACACTGGCTGCCACCCTGACCACTTGGGTGCGCTGAAGAGGCTGCTGAAAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
3UTR-3UTR GCA 90 bp CTCTTCAGCGCACCCAAGTGGTCAGGGTGGCAGCCAGTGTCGGTCTGGGCTTTCTGCGGTGCCTGGCAGTaGTGGGAAAGTCTCTGTAAG +
Preference number: 2 (lower is better)
Translates to: LFSAPKWSGWQPVSVWAFCGAWQ*WESLCK
Trigger: CTTACAGAGACTTTCCCAGCACTGCCAGGCACCGCA...GAAAGCCCAGACCGACACTGGCTGCCACCCTGACCACTTGGGTGCGCTGAAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
3UTR-3UTR CCA 90 bp CAGCAGCCTCTTCAGCGCACCCAAGTGGTCAGGGTGGCAGCCAGTGTCGGTCTGGCCTCAGAGAGGCAGTaGCAGAATTATCCACTGGGA +
Preference number: 2 (lower is better)
Translates to: QQPLQRTQVVRVAASVGLASERQ*QNYPLG
Trigger: TCCCAGTGGATAATTCTGCCACTGCCTCTCTGAGGC...CAGACCGACACTGGCTGCCACCCTGACCACTTGGGTGCGCTGAAGAGGCTGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
3UTR-3UTR CCA 90 bp CTCTTCAGCGCACCCAAGTGGTCAGGGTGGCAGCCAGTGTCGGTCTGGGCTTTCGGAACTCGGTGTGCCTaGTTCAGTTGGCCTCAGAGA +
Preference number: 2 (lower is better)
Translates to: LFSAPKWSGWQPVSVWAFGTRCA*FSWPQR
Trigger: TCTCTGAGGCCAACTGAACCAGGCACACCGAGTTCC...GAAAGCCCAGACCGACACTGGCTGCCACCCTGACCACTTGGGTGCGCTGAAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
3UTR-3UTR CCA 90 bp GGTCAGGGTGGCAGCCAGTGTCGGTCTGGGCTTTCCTCCACATCAAGAGGACCTGGTGCCTGGCAGTGCTaGGAAAGTCTCTGTAAGCGG +
Preference number: 2 (lower is better)
Translates to: GQGGSQCRSGLSSTSRGPGAWQC*ESLCKR
Trigger: CCGCTTACAGAGACTTTCCCAGCACTGCCAGGCACC...AGGTCCTCTTGATGTGGAGGAAAGCCCAGACCGACACTGGCTGCCACCCTGACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
3UTR-3UTR TCA 90 bp GCTGCGGTGCCTGGCAGTGCTGGGAAAGTCTCTGTAAGCGGATCCAGAGTGTTCGCCCATTTACTCGGCTaGGGGACACAAGGAGCTGAG +
Preference number: 2 (lower is better)
Translates to: AAVPGSAGKVSVSGSRVFAHLLG*GTQGAE
Trigger: CTCAGCTCCTTGTGTCCCTCAGCCGAGTAAATGGGC...GAACACTCTGGATCCGCTTACAGAGACTTTCCCAGCACTGCCAGGCACCGCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
3UTR-3UTR CCA 90 bp GTGTGCCTGGTTCAGTTGGCCTCAGAGAGGCAGTGGCAGAATTATCCACTGGGACACCGTCCAGGGTCCTaGGGATGGCCAGAGTTGCTC +
Preference number: 2 (lower is better)
Translates to: VCLVQLASERQWQNYPLGHRPGS*GWPELL
Trigger: GAGCAACTCTGGCCATCCCCAGGACCCTGGACGGTG...TCCCAGTGGATAATTCTGCCACTGCCTCTCTGAGGCCAACTGAACCAGGCACAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
3UTR-3UTR GCA 90 bp CTTTCCTCCACATCAAGAGGACCTTGCCCAGAAGAACCCTTTATCCCCCAAGAAGAGGGACAGCCTCTCTaGACTCAGGCAGTAGGGCAC +
Preference number: 2 (lower is better)
Translates to: LSSTSRGPCPEEPFIPQEEGQPL*TQAVGH
Trigger: GTGCCCTACTGCCTGAGTGCAGAGAGGCTGTCCCTC...TTCTTGGGGGATAAAGGGTTCTTCTGGGCAAGGTCCTCTTGATGTGGAGGAAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
3UTR-3UTR CCA 90 bp AGTTTATTTTGCAGCTCTTTCAGCAGCCTCTTCAGCGCACCCAAGTGGTCAGGGCAGCCAGTGTCGGTCTaGGCTTTCCTCCACATCAAG +
Preference number: 2 (lower is better)
Translates to: SLFCSSFSSLFSAPKWSGQPVSV*AFLHIK
Trigger: CTTGATGTGGAGGAAAGCCCAGACCGACACTGGCTG...CCCTGACCACTTGGGTGCGCTGAAGAGGCTGCTGAAAGAGCTGCAAAATAAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
3UTR-3UTR TCA 90 bp AGTTTATTTTGCAGCTCTTTCAGCAGCCTCTTCAGCGCACCCAAGTGGTCAGGGAGAACAAGTGTCTTGTaGTCAGACACCGGATCCCCA +
Preference number: 2 (lower is better)
Translates to: SLFCSSFSSLFSAPKWSGRTSVL*SDTGSP
Trigger: TGGGGATCCGGTGTCTGATCACAAGACACTTGTTCT...CCCTGACCACTTGGGTGCGCTGAAGAGGCTGCTGAAAGAGCTGCAAAATAAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
3UTR-3UTR CCA 90 bp CTTTCCTCCACATCAAGAGGACCTTGCCCAGAAGAACCCTTTATCCCCCAAGAAGCCTCAGAGAGGCAGTaGCAGAATTATCCACTGGGA +
Preference number: 2 (lower is better)
Translates to: LSSTSRGPCPEEPFIPQEASERQ*QNYPLG
Trigger: TCCCAGTGGATAATTCTGCCACTGCCTCTCTGAGGC...TTCTTGGGGGATAAAGGGTTCTTCTGGGCAAGGTCCTCTTGATGTGGAGGAAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
3UTR-3UTR CCA 90 bp GCTGCGGTGCCTGGCAGTGCTGGGAAAGTCTCTGTAAGCGGATCCAGAGTGTTCTTTGTCCTTTATCTCTaGAGAACCTCTCTAATGGGA +
Preference number: 2 (lower is better)
Translates to: AAVPGSAGKVSVSGSRVFFVLYL*RTSLMG
Trigger: TCCCATTAGAGAGGTTCTCCAGAGATAAAGGACAAA...GAACACTCTGGATCCGCTTACAGAGACTTTCCCAGCACTGCCAGGCACCGCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
3UTR-3UTR CCA 90 bp CTTTCCTCCACATCAAGAGGACCTTGCCCAGAAGAACCCTTTATCCCCCAAGAACAGCTACATTTGGAGTaGCTCCGTGAGTTTTCCCAA +
Preference number: 2 (lower is better)
Translates to: LSSTSRGPCPEEPFIPQEQLHLE*LREFSQ
Trigger: TTGGGAAAACTCACGGAGCCACTCCAAATGTAGCTG...TTCTTGGGGGATAAAGGGTTCTTCTGGGCAAGGTCCTCTTGATGTGGAGGAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
3UTR TCA 72 bp CACCCCACCCCTGGCCGGAGCATCTCATTCGGGTCCTaGTGCTGCGGTGCCTGGCAGTGCTGGGAAAGTCTC +
Preference number: 3 (lower is better)
Translates to: HPTPGRSISFGS*CCGAWQCWESL
Trigger: GAGACTTTCCCAGCACTGCCAGGCACCGCAGCATCAGGACCCGAATGAGATGCTCCGGCCAGGGGTGGGGTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
3UTR GCA 72 bp GCCAGAGGTTCTGGGAGGGGTGAGGGACAGCCTCTCTaGACTCAGGCAGTAGGGCACTCAGTACCCTGTGGG +
Preference number: 3 (lower is better)
Translates to: ARGSGRGEGQPL*TQAVGHSVPCG
Trigger: CCCACAGGGTACTGAGTGCCCTACTGCCTGAGTGCAGAGAGGCTGTCCCTCACCCCTCCCAGAACCTCTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
3UTR TCA 72 bp GAATTATCCACTGGGACAAACCCTGAAGTCCCCAGGTaGGGAGAGGCTGGGCCCGCCTTAGCAGGGGCCCAG +
Preference number: 3 (lower is better)
Translates to: ELSTGTNPEVPR*GEAGPALAGAQ
Trigger: CTGGGCCCCTGCTAAGGCGGGCCCAGCCTCTCCTCACCTGGGGACTTCAGGGTTTGTCCCAGTGGATAATTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
3UTR CCA 72 bp CTGCAGGAGGCACGGAGGTCCAGTCCTTGCTCCACTTaGGAAGAGAGGGCTTACAGAGCCTGGGAACCGAGG +
Preference number: 3 (lower is better)
Translates to: LQEARRSSPCST*EERAYRAWEPR
Trigger: CCTCGGTTCCCAGGCTCTGTAAGCCCTCTCTTCCCAAGTGGAGCAAGGACTGGACCTCCGTGCCTCCTGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
3UTR GCA 72 bp GCAGTAGGGCACTCAGTACCCTGTGGGTGGCCAATCTaGAGGAGGCACGGAGGTCCAGTCCTTGCTCCACTT +
Preference number: 3 (lower is better)
Translates to: AVGHSVPCGWPI*RRHGGPVLAPL
Trigger: AAGTGGAGCAAGGACTGGACCTCCGTGCCTCCTGCAGATTGGCCACCCACAGGGTACTGAGTGCCCTACTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
3UTR CCA 72 bp TGCACTCAGGCAGTAGGGCACTCAGTACCCTGTGGGTaGCCAATCTGCAGGAGGCACGGAGGTCCAGTCCTT +
Preference number: 3 (lower is better)
Translates to: CTQAVGHSVPCG*PICRRHGGPVL
Trigger: AAGGACTGGACCTCCGTGCCTCCTGCAGATTGGCCACCCACAGGGTACTGAGTGCCCTACTGCCTGAGTGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
3UTR CCA 72 bp TCTCTGCACTCAGGCAGTAGGGCACTCAGTACCCTGTaGGTGGCCAATCTGCAGGAGGCACGGAGGTCCAGT +
Preference number: 3 (lower is better)
Translates to: SLHSGSRALSTL*VANLQEARRSS
Trigger: ACTGGACCTCCGTGCCTCCTGCAGATTGGCCACCCACAGGGTACTGAGTGCCCTACTGCCTGAGTGCAGAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
3UTR CCA 72 bp TTCAGCAGCCTCTTCAGCGCACCCAAGTGGTCAGGGTaGCAGCCAGTGTCGGTCTGGGCTTTCCTCCACATC +
Preference number: 3 (lower is better)
Translates to: FSSLFSAPKWSG*QPVSVWAFLHI
Trigger: GATGTGGAGGAAAGCCCAGACCGACACTGGCTGCCACCCTGACCACTTGGGTGCGCTGAAGAGGCTGCTGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
3UTR-3UTR CAA 90 bp TTTGCAGCTCTTTCAGCAGCCTCTTCAGCGCACCCAAGTGGTCAGGGTGGCAGCGTGTGCCTGGTTCAGTaGGCCTCAGAGAGGCAGTGG +
Preference number: 3 (lower is better)
Translates to: FAALSAASSAHPSGQGGSVCLVQ*ASERQW
Trigger: CCACTGCCTCTCTGAGGCCAACTGAACCAGGCACAC...GCTGCCACCCTGACCACTTGGGTGCGCTGAAGAGGCTGCTGAAAGAGCTGCAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
3UTR-3UTR CAA 90 bp TCAGGCAGTAGGGCACTCAGTACCCTGTGGGTGGCCAATCTGCAGGAGGCACGGCAGTCCTTGCTCCACTaGGGAAGAGAGGGCTTACAG +
Preference number: 3 (lower is better)
Translates to: SGSRALSTLWVANLQEARQSLLH*GREGLQ
Trigger: CTGTAAGCCCTCTCTTCCCAAGTGGAGCAAGGACTG...CCGTGCCTCCTGCAGATTGGCCACCCACAGGGTACTGAGTGCCCTACTGCCTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
3UTR TCA 72 bp AGAGGCAGTGGCAGAATTATCCACTGGGACAAACCCTaGAGTCCCCAGGTGAGGAGAGGCTGGGCCCGCCTT +
Preference number: 3 (lower is better)
Translates to: RGSGRIIHWDKP*SPQVRRGWARL
Trigger: AAGGCGGGCCCAGCCTCTCCTCACCTGGGGACTTCAGGGTTTGTCCCAGTGGATAATTCTGCCACTGCCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
3UTR-3UTR CAA 90 bp TCTTTCAGCAGCCTCTTCAGCGCACCCAAGTGGTCAGGGTGGCAGCCAGTGTCGCAGTCCTTGCTCCACTaGGGAAGAGAGGGCTTACAG +
Preference number: 3 (lower is better)
Translates to: SFSSLFSAPKWSGWQPVSQSLLH*GREGLQ
Trigger: CTGTAAGCCCTCTCTTCCCAAGTGGAGCAAGGACTG...CGACACTGGCTGCCACCCTGACCACTTGGGTGCGCTGAAGAGGCTGCTGAAAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
3UTR-3UTR CAA 90 bp GGTCAGGGTGGCAGCCAGTGTCGGTCTGGGCTTTCCTCCACATCAAGAGGACCTGAACCGCAGCTACATTaGGAGTGGCTCCGTGAGTTT +
Preference number: 3 (lower is better)
Translates to: GQGGSQCRSGLSSTSRGPEPQLH*EWLREF
Trigger: AAACTCACGGAGCCACTCCAAATGTAGCTGCGGTTC...AGGTCCTCTTGATGTGGAGGAAAGCCCAGACCGACACTGGCTGCCACCCTGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
3UTR TCA 72 bp GTGAGGAAGTATATTGGCCAGAGGTTCTGGGAGGGGTaGGGGACAGCCTCTCTGCACTCAGGCAGTAGGGCA +
Preference number: 3 (lower is better)
Translates to: VRKYIGQRFWEG*GTASLHSGSRA
Trigger: TGCCCTACTGCCTGAGTGCAGAGAGGCTGTCCCTCACCCCTCCCAGAACCTCTGGCCAATATACTTCCTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
3UTR GCA 72 bp TCCCCACCTCAGGCAAAAACCACAAGGAACTCGGTGTaGCTGGTTCAGTTGGCCTCAGAGAGGCAGTGGCAG +
Preference number: 3 (lower is better)
Translates to: SPPQAKTTRNSV*LVQLASERQWQ
Trigger: CTGCCACTGCCTCTCTGAGGCCAACTGAACCAGGCACACCGAGTTCCTTGTGGTTTTTGCCTGAGGTGGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
3UTR-3UTR CAA 90 bp TTTGCAGCTCTTTCAGCAGCCTCTTCAGCGCACCCAAGTGGTCAGGGTGGCAGCGAACCGCAGCTACATTaGGAGTGGCTCCGTGAGTTT +
Preference number: 3 (lower is better)
Translates to: FAALSAASSAHPSGQGGSEPQLH*EWLREF
Trigger: AAACTCACGGAGCCACTCCAAATGTAGCTGCGGTTC...GCTGCCACCCTGACCACTTGGGTGCGCTGAAGAGGCTGCTGAAAGAGCTGCAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
3UTR TCA 72 bp CGCTGTTGGCTCCTGCCGTGGTATCAAGGCACAAGGTaGGGAAGTATATTGGCCAGAGGTTCTGGGAGGGGT +
Preference number: 3 (lower is better)
Translates to: RCWLLPWYQGTR*GSILARGSGRG
Trigger: ACCCCTCCCAGAACCTCTGGCCAATATACTTCCTCACCTTGTGCCTTGATACCACGGCAGGAGCCAACAGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
3UTR-3UTR CAA 90 bp CTCTTCAGCGCACCCAAGTGGTCAGGGTGGCAGCCAGTGTCGGTCTGGGCTTTCAGGTGTCCTGTCTGTTaGTCCTTTATCTCTGGAGAA +
Preference number: 3 (lower is better)
Translates to: LFSAPKWSGWQPVSVWAFRCPVC*SFISGE
Trigger: TTCTCCAGAGATAAAGGACAAACAGACAGGACACCT...GAAAGCCCAGACCGACACTGGCTGCCACCCTGACCACTTGGGTGCGCTGAAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
3UTR CCA 72 bp TCGGTGTGCCTGGTTCAGTTGGCCTCAGAGAGGCAGTaGCAGAATTATCCACTGGGACAAACCCTGAAGTCC +
Preference number: 3 (lower is better)
Translates to: SVCLVQLASERQ*QNYPLGQTLKS
Trigger: GGACTTCAGGGTTTGTCCCAGTGGATAATTCTGCCACTGCCTCTCTGAGGCCAACTGAACCAGGCACACCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
3UTR-3UTR CAA 90 bp CTTTCCTCCACATCAAGAGGACCTTGCCCAGAAGAACCCTTTATCCCCCAAGAAGTGTGCCTGGTTCAGTaGGCCTCAGAGAGGCAGTGG +
Preference number: 3 (lower is better)
Translates to: LSSTSRGPCPEEPFIPQEVCLVQ*ASERQW
Trigger: CCACTGCCTCTCTGAGGCCAACTGAACCAGGCACAC...TTCTTGGGGGATAAAGGGTTCTTCTGGGCAAGGTCCTCTTGATGTGGAGGAAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
3UTR TCA 72 bp TCTCATCTGGCGTTCTCTTTGGCCCATTTACTCGGCTaGGGGACACAAGGAGCTGAGTGCAAACCAACGTGG +
Preference number: 3 (lower is better)
Translates to: SHLAFSLAHLLG*GTQGAECKPTW
Trigger: CCACGTTGGTTTGCACTCAGCTCCTTGTGTCCCTCAGCCGAGTAAATGGGCCAAAGAGAACGCCAGATGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
3UTR CCA 72 bp CACCTCAGGCAAAAACCACAAGGAACTCGGTGTGCCTaGTTCAGTTGGCCTCAGAGAGGCAGTGGCAGAATT +
Preference number: 3 (lower is better)
Translates to: HLRQKPQGTRCA*FSWPQRGSGRI
Trigger: AATTCTGCCACTGCCTCTCTGAGGCCAACTGAACCAGGCACACCGAGTTCCTTGTGGTTTTTGCCTGAGGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
3UTR CCA 72 bp CAAAAACCACAAGGAACTCGGTGTGCCTGGTTCAGTTaGCCTCAGAGAGGCAGTGGCAGAATTATCCACTGG +
Preference number: 3 (lower is better)
Translates to: QKPQGTRCAWFS*PQRGSGRIIHW
Trigger: CCAGTGGATAATTCTGCCACTGCCTCTCTGAGGCCAACTGAACCAGGCACACCGAGTTCCTTGTGGTTTTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
3UTR TCA 72 bp CTGAGTGCAAACCAACGTGGTAGAACAAGTGTCTTGTaGTCAGACACCGGATCCCCACCTCAGGCAAAAACC +
Preference number: 3 (lower is better)
Translates to: LSANQRGRTSVL*SDTGSPPQAKT
Trigger: GGTTTTTGCCTGAGGTGGGGATCCGGTGTCTGATCACAAGACACTTGTTCTACCACGTTGGTTTGCACTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
3UTR TCA 72 bp CTGGGAACCGAGGCAGTAACTCTCCTCCAGCCATGCTaGATGCTAGGTGTCCTGTCTGTTTGTCCTTTATCT +
Preference number: 3 (lower is better)
Translates to: LGTEAVTLLQPC*MLGVLSVCPLS
Trigger: AGATAAAGGACAAACAGACAGGACACCTAGCATTCAGCATGGCTGGAGGAGAGTTACTGCCTCGGTTCCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CCA 90 bp GTCCCTCGAAGGCCTGCCGCATGGCCATCCCACCGTCCAGGGTCCTGGGGATGGCCTCCAGCTCGTCCATaGCTTCCAGCAGCAGCCGCT +
Preference number: 4 (lower is better)
Translates to: VPRRPAAWPSHRPGSWGWPPARP*LPAAAA
Trigger: AGCGGCTGCTGCTGGAAGCCATGGACGAGCTGGAGG...CCATCCCCAGGACCCTGGACGGTGGGATGGCCATGCGGCAGGCCTTCGAGGGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR TCA 90 bp GTCCCTCGAAGGCCTGCCGCATGGCCATCCCACCGTCCAGGGTCCTGGGGATGGCCCTTCAGAGTTGGGTaGGGCCTGCCTGCAAGCATC +
Preference number: 4 (lower is better)
Translates to: VPRRPAAWPSHRPGSWGWPFRVG*GLPASI
Trigger: GATGCTTGCAGGCAGGCCTCACCCAACTCTGAAGGG...CCATCCCCAGGACCCTGGACGGTGGGATGGCCATGCGGCAGGCCTTCGAGGGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR GCA 90 bp GGTCAGGGTGGCAGCCAGTGTCGGTCTGGGCTTTCCTCCACATCAAGAGGACCTCCACCGGGGCGGGGATaGGGCCGGCCACACTGGTCA +
Preference number: 4 (lower is better)
Translates to: GQGGSQCRSGLSSTSRGPPPGRG*GRPHWS
Trigger: TGACCAGTGTGGCCGGCCGCATCCCCGCCCCGGTGG...AGGTCCTCTTGATGTGGAGGAAAGCCCAGACCGACACTGGCTGCCACCCTGACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CCA 90 bp GTCCCTCGAAGGCCTGCCGCATGGCCATCCCACCGTCCAGGGTCCTGGGGATGGTCTGGCACGGTGACGTaGGAGACCCCGTTGGTATGC +
Preference number: 4 (lower is better)
Translates to: VPRRPAAWPSHRPGSWGWSGTVT*ETPLVC
Trigger: GCATACCAACGGGGTCTCCCACGTCACCGTGCCAGA...CCATCCCCAGGACCCTGGACGGTGGGATGGCCATGCGGCAGGCCTTCGAGGGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CCA 90 bp GTCCCTCGAAGGCCTGCCGCATGGCCATCCCACCGTCCAGGGTCCTGGGGATGGTCTGGGCAGAACTGGTaGCCGTACATGTCGATGGCG +
Preference number: 4 (lower is better)
Translates to: VPRRPAAWPSHRPGSWGWSGQNW*PYMSMA
Trigger: CGCCATCGACATGTACGGCCACCAGTTCTGCCCAGA...CCATCCCCAGGACCCTGGACGGTGGGATGGCCATGCGGCAGGCCTTCGAGGGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR TCA 90 bp CAGCAGCCTCTTCAGCGCACCCAAGTGGTCAGGGTGGCAGCCAGTGTCGGTCTGCGGAGGCCTCTGGCATaGGCTTGGCAGGGAGTTCCT +
Preference number: 4 (lower is better)
Translates to: QQPLQRTQVVRVAASVGLRRPLA*AWQGVP
Trigger: AGGAACTCCCTGCCAAGCTCATGCCAGAGGCCTCCG...CAGACCGACACTGGCTGCCACCCTGACCACTTGGGTGCGCTGAAGAGGCTGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR TCA 90 bp CAGCAGCCTCTTCAGCGCACCCAAGTGGTCAGGGTGGCAGCCAGTGTCGGTCTGTCAGCAGGGAGGACCTaGCCCCTTTCCAGGGAGTGC +
Preference number: 4 (lower is better)
Translates to: QQPLQRTQVVRVAASVGLSAGRT*PLSREC
Trigger: GCACTCCCTGGAAAGGGGTCAGGTCCTCCCTGCTGA...CAGACCGACACTGGCTGCCACCCTGACCACTTGGGTGCGCTGAAGAGGCTGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR GCA 90 bp TCTCATTCGGGTCCTGATGCTGCGGTGCCTGGCAGTGCTGGGAAAGTCTCTGTACCACCGGGGCGGGGATaGGGCCGGCCACACTGGTCA +
Preference number: 4 (lower is better)
Translates to: SHSGPDAAVPGSAGKVSVPPGRG*GRPHWS
Trigger: TGACCAGTGTGGCCGGCCGCATCCCCGCCCCGGTGG...TACAGAGACTTTCCCAGCACTGCCAGGCACCGCAGCATCAGGACCCGAATGAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR GCA 90 bp GTCCCTCGAAGGCCTGCCGCATGGCCATCCCACCGTCCAGGGTCCTGGGGATGGGGGAGTGTGAGAAGATaGAGTCCAGCACCTGGGTCA +
Preference number: 4 (lower is better)
Translates to: VPRRPAAWPSHRPGSWGWGSVRR*SPAPGS
Trigger: TGACCCAGGTGCTGGACTGCATCTTCTCACACTCCC...CCATCCCCAGGACCCTGGACGGTGGGATGGCCATGCGGCAGGCCTTCGAGGGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CCA 90 bp TCAGGCAGTAGGGCACTCAGTACCCTGTGGGTGGCCAATCTGCAGGAGGCACGGAGCATCTGGAACCTCTaGGCCCGGGGCGGCTGTCCA +
Preference number: 4 (lower is better)
Translates to: SGSRALSTLWVANLQEARSIWNL*ARGGCP
Trigger: TGGACAGCCGCCCCGGGCCCAGAGGTTCCAGATGCT...CCGTGCCTCCTGCAGATTGGCCACCCACAGGGTACTGAGTGCCCTACTGCCTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CCA 90 bp CAGCAGCCTCTTCAGCGCACCCAAGTGGTCAGGGTGGCAGCCAGTGTCGGTCTGGCTCGGGGGCCTGGCTaGGAAGGACAACCCATTAGC +
Preference number: 4 (lower is better)
Translates to: QQPLQRTQVVRVAASVGLARGPG*EGQPIS
Trigger: GCTAATGGGTTGTCCTTCCCAGCCAGGCCCCCGAGC...CAGACCGACACTGGCTGCCACCCTGACCACTTGGGTGCGCTGAAGAGGCTGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CCA 90 bp GTCCCTCGAAGGCCTGCCGCATGGCCATCCCACCGTCCAGGGTCCTGGGGATGGCCAGCTGGTTCTTCTTaGCCACCTGGGAGTGTGAGA +
Preference number: 4 (lower is better)
Translates to: VPRRPAAWPSHRPGSWGWPAGSS*PPGSVR
Trigger: TCTCACACTCCCAGGTGGCCAAGAAGAACCAGCTGG...CCATCCCCAGGACCCTGGACGGTGGGATGGCCATGCGGCAGGCCTTCGAGGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CCA 90 bp GTCCCTCGAAGGCCTGCCGCATGGCCATCCCACCGTCCAGGGTCCTGGGGATGGGGCCGTACATGTCGATaGCGGACAGGAAGATGGACT +
Preference number: 4 (lower is better)
Translates to: VPRRPAAWPSHRPGSWGWGRTCR*RTGRWT
Trigger: AGTCCATCTTCCTGTCCGCCATCGACATGTACGGCC...CCATCCCCAGGACCCTGGACGGTGGGATGGCCATGCGGCAGGCCTTCGAGGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CCA 90 bp TCAGGCAGTAGGGCACTCAGTACCCTGTGGGTGGCCAATCTGCAGGAGGCACGGGCACGGCCATCCGGTTaGGGTGGGAAGAGGGCAGCA +
Preference number: 4 (lower is better)
Translates to: SGSRALSTLWVANLQEARARPSG*GGKRAA
Trigger: TGCTGCCCTCTTCCCACCCCAACCGGATGGCCGTGC...CCGTGCCTCCTGCAGATTGGCCACCCACAGGGTACTGAGTGCCCTACTGCCTGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CCA 90 bp CAGCAGCCTCTTCAGCGCACCCAAGTGGTCAGGGTGGCAGCCAGTGTCGGTCTGATGGCCCCCATCCGCTaGCACAGTGGGGAGAAGCCA +
Preference number: 4 (lower is better)
Translates to: QQPLQRTQVVRVAASVGLMAPIR*HSGEKP
Trigger: TGGCTTCTCCCCACTGTGCCAGCGGATGGGGGCCAT...CAGACCGACACTGGCTGCCACCCTGACCACTTGGGTGCGCTGAAGAGGCTGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR TCA 90 bp CAGCAGCCTCTTCAGCGCACCCAAGTGGTCAGGGTGGCAGCCAGTGTCGGTCTGGGCCACCTGGGAGTGTaGGAAGATGCAGTCCAGCAC +
Preference number: 4 (lower is better)
Translates to: QQPLQRTQVVRVAASVGLGHLGV*EDAVQH
Trigger: GTGCTGGACTGCATCTTCTCACACTCCCAGGTGGCC...CAGACCGACACTGGCTGCCACCCTGACCACTTGGGTGCGCTGAAGAGGCTGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR GCA 90 bp CTCTTCAGCGCACCCAAGTGGTCAGGGTGGCAGCCAGTGTCGGTCTGGGCTTTCATGTCCTTCAGTCGGTaGAGGGGCACGCCCATGGCG +
Preference number: 4 (lower is better)
Translates to: LFSAPKWSGWQPVSVWAFMSFSR*RGTPMA
Trigger: CGCCATGGGCGTGCCCCTGCACCGACTGAAGGACAT...GAAAGCCCAGACCGACACTGGCTGCCACCCTGACCACTTGGGTGCGCTGAAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR GCA 90 bp CAGCAGCCTCTTCAGCGCACCCAAGTGGTCAGGGTGGCAGCCAGTGTCGGTCTGTCTGGGAGCTCCCGGTaGTGCAGGCTGTTTAGCTCG +
Preference number: 4 (lower is better)
Translates to: QQPLQRTQVVRVAASVGLSGSSR*CRLFSS
Trigger: CGAGCTAAACAGCCTGCAGCACCGGGAGCTCCCAGA...CAGACCGACACTGGCTGCCACCCTGACCACTTGGGTGCGCTGAAGAGGCTGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CCA 90 bp CTCTTCAGCGCACCCAAGTGGTCAGGGTGGCAGCCAGTGTCGGTCTGGGCTTTCCCTTACGCTGCAGGGTaGCGGCATGGCAGTCCAGGA +
Preference number: 4 (lower is better)
Translates to: LFSAPKWSGWQPVSVWAFPYAAG*RHGSPG
Trigger: TCCTGGACTGCCATGCCGCCACCCTGCAGCGTAAGG...GAAAGCCCAGACCGACACTGGCTGCCACCCTGACCACTTGGGTGCGCTGAAGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CCA 90 bp CAGCAGCCTCTTCAGCGCACCCAAGTGGTCAGGGTGGCAGCCAGTGTCGGTCTGGCCATCCGGTTGGGGTaGGAAGAGGGCAGCATGAAC +
Preference number: 4 (lower is better)
Translates to: QQPLQRTQVVRVAASVGLAIRLG*EEGSMN
Trigger: GTTCATGCTGCCCTCTTCCCACCCCAACCGGATGGC...CAGACCGACACTGGCTGCCACCCTGACCACTTGGGTGCGCTGAAGAGGCTGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CCA 90 bp TCAGGCAGTAGGGCACTCAGTACCCTGTGGGTGGCCAATCTGCAGGAGGCACGGCCTCCAGCTCGTCCATaGCTTCCAGCAGCAGCCGCT +
Preference number: 4 (lower is better)
Translates to: SGSRALSTLWVANLQEARPPARP*LPAAAA
Trigger: AGCGGCTGCTGCTGGAAGCCATGGACGAGCTGGAGG...CCGTGCCTCCTGCAGATTGGCCACCCACAGGGTACTGAGTGCCCTACTGCCTGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CCA 90 bp TTTGCAGCTCTTTCAGCAGCCTCTTCAGCGCACCCAAGTGGTCAGGGTGGCAGCTCCCGGGCCTTCAGCTaGCCCTCCAGCTCCTTCCGG +
Preference number: 4 (lower is better)
Translates to: FAALSAASSAHPSGQGGSSRAFS*PSSSFR
Trigger: CCGGAAGGAGCTGGAGGGCCAGCTGAAGGCCCGGGA...GCTGCCACCCTGACCACTTGGGTGCGCTGAAGAGGCTGCTGAAAGAGCTGCAAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR TCA 90 bp CTCTTCAGCGCACCCAAGTGGTCAGGGTGGCAGCCAGTGTCGGTCTGGGCTTTCCTGGGGACGCGACGGTaGAATCTCTGTGCAGGTCCA +
Preference number: 4 (lower is better)
Translates to: LFSAPKWSGWQPVSVWAFLGTRR*NLCAGP
Trigger: TGGACCTGCACAGAGATTTCACCGTCGCGTCCCCAG...GAAAGCCCAGACCGACACTGGCTGCCACCCTGACCACTTGGGTGCGCTGAAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR TCA 90 bp GCTGCGGTGCCTGGCAGTGCTGGGAAAGTCTCTGTAAGCGGATCCAGAGTGTTCCCTCGGGCGTCACCATaGCCACGAACCGGATGGCAC +
Preference number: 4 (lower is better)
Translates to: AAVPGSAGKVSVSGSRVFPRASP*PRTGWH
Trigger: GTGCCATCCGGTTCGTGGTCATGGTGACGCCCGAGG...GAACACTCTGGATCCGCTTACAGAGACTTTCCCAGCACTGCCAGGCACCGCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR TCA 90 bp CTCTTCAGCGCACCCAAGTGGTCAGGGTGGCAGCCAGTGTCGGTCTGGGCTTTCTTCTGGTGCCGCCTCTaGATGGAACAGTCCCGTCCG +
Preference number: 4 (lower is better)
Translates to: LFSAPKWSGWQPVSVWAFFWCRL*MEQSRP
Trigger: CGGACGGGACTGTTCCATTCAGAGGCGGCACCAGAA...GAAAGCCCAGACCGACACTGGCTGCCACCCTGACCACTTGGGTGCGCTGAAGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR TCA 90 bp TCTTTCAGCAGCCTCTTCAGCGCACCCAAGTGGTCAGGGTGGCAGCCAGTGTCGGGTCAGAAGGAGTGGTaGTGGGGACCGGGCTGCGAT +
Preference number: 4 (lower is better)
Translates to: SFSSLFSAPKWSGWQPVSGQKEW*WGPGCD
Trigger: ATCGCAGCCCGGTCCCCATCACCACTCCTTCTGACC...CGACACTGGCTGCCACCCTGACCACTTGGGTGCGCTGAAGAGGCTGCTGAAAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR TCA 90 bp TCAGGCAGTAGGGCACTCAGTACCCTGTGGGTGGCCAATCTGCAGGAGGCACGGCAAGCCGTCCTTGGCTaGCCAGTGCTGTTCCAGCCA +
Preference number: 4 (lower is better)
Translates to: SGSRALSTLWVANLQEARQAVLG*PVLFQP
Trigger: TGGCTGGAACAGCACTGGTCAGCCAAGGACGGCTTG...CCGTGCCTCCTGCAGATTGGCCACCCACAGGGTACTGAGTGCCCTACTGCCTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR GCA 90 bp CAGCAGCCTCTTCAGCGCACCCAAGTGGTCAGGGTGGCAGCCAGTGTCGGTCTGATTTCAGTGCACGGATaGTCCACCTGCAGGCGTGGG +
Preference number: 4 (lower is better)
Translates to: QQPLQRTQVVRVAASVGLISVHG*STCRRG
Trigger: CCCACGCCTGCAGGTGGAGCATCCGTGCACTGAAAT...CAGACCGACACTGGCTGCCACCCTGACCACTTGGGTGCGCTGAAGAGGCTGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR GCA 90 bp GAGCCTGGGAACCGAGGCAGTAACTCTCCTCCAGCCATGCTGAATGCTAGGTGTCATCACCCTGCGGACTaGCTTCTCCACCGGGGCGGG +
Preference number: 4 (lower is better)
Translates to: EPGNRGSNSPPAMLNARCHHPAD*LLHRGG
Trigger: CCCGCCCCGGTGGAGAAGGCAGTCCGCAGGGTGATG...ACACCTAGCATTCAGCATGGCTGGAGGAGAGTTACTGCCTCGGTTCCCAGGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR GCA 90 bp TCTTTCAGCAGCCTCTTCAGCGCACCCAAGTGGTCAGGGTGGCAGCCAGTGTCGTCACTCCCACAGGGATaGCCCCCAGCCTTGCTCGTC +
Preference number: 4 (lower is better)
Translates to: SFSSLFSAPKWSGWQPVSSLPQG*PPALLV
Trigger: GACGAGCAAGGCTGGGGGGCATCCCTGTGGGAGTGA...CGACACTGGCTGCCACCCTGACCACTTGGGTGCGCTGAAGAGGCTGCTGAAAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR GCA 90 bp GGTCAGGGTGGCAGCCAGTGTCGGTCTGGGCTTTCCTCCACATCAAGAGGACCTTGGCCCGGGGTGTCGTaGAGGTCTGCGAACTGCACT +
Preference number: 4 (lower is better)
Translates to: GQGGSQCRSGLSSTSRGPWPGVS*RSANCT
Trigger: AGTGCAGTTCGCAGACCTGCACGACACCCCGGGCCA...AGGTCCTCTTGATGTGGAGGAAAGCCCAGACCGACACTGGCTGCCACCCTGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CCA 90 bp CAGCAGCCTCTTCAGCGCACCCAAGTGGTCAGGGTGGCAGCCAGTGTCGGTCTGGCTGTCCAGTTGGTTTaGAGTTCTGGGGAGGGCCAG +
Preference number: 4 (lower is better)
Translates to: QQPLQRTQVVRVAASVGLAVQLV*SSGEGQ
Trigger: CTGGCCCTCCCCAGAACTCCAAACCAACTGGACAGC...CAGACCGACACTGGCTGCCACCCTGACCACTTGGGTGCGCTGAAGAGGCTGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CCA 90 bp AATTATCCACTGGGACAAACCCTGAAGTCCCCAGGTGAGGAGAGGCTGGGCCCGGCAGGGGCACGCCCATaGCGATCTGCAACTGCGCAG +
Preference number: 4 (lower is better)
Translates to: NYPLGQTLKSPGEERLGPAGARP*RSATAQ
Trigger: CTGCGCAGTTGCAGATCGCCATGGGCGTGCCCCTGC...CGGGCCCAGCCTCTCCTCACCTGGGGACTTCAGGGTTTGTCCCAGTGGATAATT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CCA 90 bp CAGCAGCCTCTTCAGCGCACCCAAGTGGTCAGGGTGGCAGCCAGTGTCGGTCTGCCATCGTTCAGCCGGTaGGCATCGATCTCGATGTGG +
Preference number: 4 (lower is better)
Translates to: QQPLQRTQVVRVAASVGLPSFSR*ASISMW
Trigger: CCACATCGAGATCGATGCCCACCGGCTGAACGATGG...CAGACCGACACTGGCTGCCACCCTGACCACTTGGGTGCGCTGAAGAGGCTGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CCA 90 bp CTCTTCAGCGCACCCAAGTGGTCAGGGTGGCAGCCAGTGTCGGTCTGGGCTTTCGGCAGTCCAGGATGGTaGCTATCTGCTGGCTGGGGA +
Preference number: 4 (lower is better)
Translates to: LFSAPKWSGWQPVSVWAFGSPGW*LSAGWG
Trigger: TCCCCAGCCAGCAGATAGCCACCATCCTGGACTGCC...GAAAGCCCAGACCGACACTGGCTGCCACCCTGACCACTTGGGTGCGCTGAAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CCA 90 bp GGTCAGGGTGGCAGCCAGTGTCGGTCTGGGCTTTCCTCCACATCAAGAGGACCTCACACAGGTGCCATCTaGGAGCTCCCGGTGCTGCAG +
Preference number: 4 (lower is better)
Translates to: GQGGSQCRSGLSSTSRGPHTGAI*ELPVLQ
Trigger: CTGCAGCACCGGGAGCTCCCAGATGGCACCTGTGTG...AGGTCCTCTTGATGTGGAGGAAAGCCCAGACCGACACTGGCTGCCACCCTGACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CCA 90 bp GTCCCTCGAAGGCCTGCCGCATGGCCATCCCACCGTCCAGGGTCCTGGGGATGGCCGAAAGAGCCGATTTaGAAGGTGATGTCATTGCCG +
Preference number: 4 (lower is better)
Translates to: VPRRPAAWPSHRPGSWGWPKEPI*KVMSLP
Trigger: CGGCAATGACATCACCTTCCAAATCGGCTCTTTCGG...CCATCCCCAGGACCCTGGACGGTGGGATGGCCATGCGGCAGGCCTTCGAGGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CCA 90 bp CAGCAGCCTCTTCAGCGCACCCAAGTGGTCAGGGTGGCAGCCAGTGTCGGTCTGCCACCTGGTGGTAGATaGGAAGCAGCAGTTCCTCCC +
Preference number: 4 (lower is better)
Translates to: QQPLQRTQVVRVAASVGLPPGGR*EAAVPP
Trigger: GGGAGGAACTGCTGCTTCCCATCTACCACCAGGTGG...CAGACCGACACTGGCTGCCACCCTGACCACTTGGGTGCGCTGAAGAGGCTGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR TCA 90 bp TCTTTCAGCAGCCTCTTCAGCGCACCCAAGTGGTCAGGGTGGCAGCCAGTGTCGCTGGGGACGCGACGGTaGAATCTCTGTGCAGGTCCA +
Preference number: 4 (lower is better)
Translates to: SFSSLFSAPKWSGWQPVSLGTRR*NLCAGP
Trigger: TGGACCTGCACAGAGATTTCACCGTCGCGTCCCCAG...CGACACTGGCTGCCACCCTGACCACTTGGGTGCGCTGAAGAGGCTGCTGAAAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR TCA 90 bp GTCCCTCGAAGGCCTGCCGCATGGCCATCCCACCGTCCAGGGTCCTGGGGATGGCGCCTTCGGAGGCTTTaGTCATCAAAGGAAATCCTA +
Preference number: 4 (lower is better)
Translates to: VPRRPAAWPSHRPGSWGWRLRRL*SSKEIL
Trigger: TAGGATTTCCTTTGATGATCAAAGCCTCCGAAGGCG...CCATCCCCAGGACCCTGGACGGTGGGATGGCCATGCGGCAGGCCTTCGAGGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR TCA 90 bp CTCTTCAGCGCACCCAAGTGGTCAGGGTGGCAGCCAGTGTCGGTCTGGGCTTTCACACCACCCCAAGCATaGTGTCCGGCTTCTCTGCCT +
Preference number: 4 (lower is better)
Translates to: LFSAPKWSGWQPVSVWAFTPPQA*CPASLP
Trigger: AGGCAGAGAAGCCGGACATCATGCTTGGGGTGGTGT...GAAAGCCCAGACCGACACTGGCTGCCACCCTGACCACTTGGGTGCGCTGAAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR TCA 90 bp GCTGCGGTGCCTGGCAGTGCTGGGAAAGTCTCTGTAAGCGGATCCAGAGTGTTCAGTCATCTGGCACGGTaGCGTGGGAGACCCCGTTGG +
Preference number: 4 (lower is better)
Translates to: AAVPGSAGKVSVSGSRVFSHLAR*RGRPRW
Trigger: CCAACGGGGTCTCCCACGTCACCGTGCCAGATGACT...GAACACTCTGGATCCGCTTACAGAGACTTTCCCAGCACTGCCAGGCACCGCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR TCA 90 bp TCTTTCAGCAGCCTCTTCAGCGCACCCAAGTGGTCAGGGTGGCAGCCAGTGTCGCCCTTCAGAGTTGGGTaGGGCCTGCCTGCAAGCATC +
Preference number: 4 (lower is better)
Translates to: SFSSLFSAPKWSGWQPVSPFRVG*GLPASI
Trigger: GATGCTTGCAGGCAGGCCTCACCCAACTCTGAAGGG...CGACACTGGCTGCCACCCTGACCACTTGGGTGCGCTGAAGAGGCTGCTGAAAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR GCA 90 bp CTCTTCAGCGCACCCAAGTGGTCAGGGTGGCAGCCAGTGTCGGTCTGGGCTTTCCTGCACTCTCAGCCTTaGGGATACCTTTCCCGCCTC +
Preference number: 4 (lower is better)
Translates to: LFSAPKWSGWQPVSVWAFLHSQP*GYLSRL
Trigger: GAGGCGGGAAAGGTATCCGCAAGGCTGAGAGTGCAG...GAAAGCCCAGACCGACACTGGCTGCCACCCTGACCACTTGGGTGCGCTGAAGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR GCA 90 bp AATTATCCACTGGGACAAACCCTGAAGTCCCCAGGTGAGGAGAGGCTGGGCCCGACTGGGCCATCACCCTaGGGACTGCCTTCTCCACCG +
Preference number: 4 (lower is better)
Translates to: NYPLGQTLKSPGEERLGPTGPSP*GLPSPP
Trigger: CGGTGGAGAAGGCAGTCCGCAGGGTGATGGCCCAGT...CGGGCCCAGCCTCTCCTCACCTGGGGACTTCAGGGTTTGTCCCAGTGGATAATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR GCA 90 bp CAGCAGCCTCTTCAGCGCACCCAAGTGGTCAGGGTGGCAGCCAGTGTCGGTCTGCGCTCACCTTCGTTCTaGAGGTACTCGAAGGAGGCT +
Preference number: 4 (lower is better)
Translates to: QQPLQRTQVVRVAASVGLRSPSF*RYSKEA
Trigger: AGCCTCCTTCGAGTACCTGCAGAACGAAGGTGAGCG...CAGACCGACACTGGCTGCCACCCTGACCACTTGGGTGCGCTGAAGAGGCTGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CCA 90 bp TCAGGCAGTAGGGCACTCAGTACCCTGTGGGTGGCCAATCTGCAGGAGGCACGGGCTGTCCAGTTGGTTTaGAGTTCTGGGGAGGGCCAG +
Preference number: 4 (lower is better)
Translates to: SGSRALSTLWVANLQEARAVQLV*SSGEGQ
Trigger: CTGGCCCTCCCCAGAACTCCAAACCAACTGGACAGC...CCGTGCCTCCTGCAGATTGGCCACCCACAGGGTACTGAGTGCCCTACTGCCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CCA 90 bp GTGTGCCTGGTTCAGTTGGCCTCAGAGAGGCAGTGGCAGAATTATCCACTGGGAGGGGATACTGTCCTCTaGCTCGGGGGCCTGGCTGGG +
Preference number: 4 (lower is better)
Translates to: VCLVQLASERQWQNYPLGGDTVL*LGGLAG
Trigger: CCCAGCCAGGCCCCCGAGCCAGAGGACAGTATCCCC...TCCCAGTGGATAATTCTGCCACTGCCTCTCTGAGGCCAACTGAACCAGGCACAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CCA 90 bp CAGCAGCCTCTTCAGCGCACCCAAGTGGTCAGGGTGGCAGCCAGTGTCGGTCTGCCTCTCTTCACCAGATaGAGTCCAGACATGCTGGGC +
Preference number: 4 (lower is better)
Translates to: QQPLQRTQVVRVAASVGLPLFTR*SPDMLG
Trigger: GCCCAGCATGTCTGGACTCCATCTGGTGAAGAGAGG...CAGACCGACACTGGCTGCCACCCTGACCACTTGGGTGCGCTGAAGAGGCTGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CCA 90 bp CTCTTCAGCGCACCCAAGTGGTCAGGGTGGCAGCCAGTGTCGGTCTGGGCTTTCCCCACATGGCCTCACTaGGGGGACCTAGGAAAGCAA +
Preference number: 4 (lower is better)
Translates to: LFSAPKWSGWQPVSVWAFPTWPH*GDLGKQ
Trigger: TTGCTTTCCTAGGTCCCCCCAGTGAGGCCATGTGGG...GAAAGCCCAGACCGACACTGGCTGCCACCCTGACCACTTGGGTGCGCTGAAGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CCA 90 bp GATCAGACACCGGATCCCCACCTCAGGCAAAAACCACAAGGAACTCGGTGTGCCGCAGGGGCACGCCCATaGCGATCTGCAACTGCGCAG +
Preference number: 4 (lower is better)
Translates to: DQTPDPHLRQKPQGTRCAAGARP*RSATAQ
Trigger: CTGCGCAGTTGCAGATCGCCATGGGCGTGCCCCTGC...GGCACACCGAGTTCCTTGTGGTTTTTGCCTGAGGTGGGGATCCGGTGTCTGATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CCA 90 bp CTCTTCAGCGCACCCAAGTGGTCAGGGTGGCAGCCAGTGTCGGTCTGGGCTTTCCCATCGTTCAGCCGGTaGGCATCGATCTCGATGTGG +
Preference number: 4 (lower is better)
Translates to: LFSAPKWSGWQPVSVWAFPSFSR*ASISMW
Trigger: CCACATCGAGATCGATGCCCACCGGCTGAACGATGG...GAAAGCCCAGACCGACACTGGCTGCCACCCTGACCACTTGGGTGCGCTGAAGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CCA 90 bp GGTCAGGGTGGCAGCCAGTGTCGGTCTGGGCTTTCCTCCACATCAAGAGGACCTCCGCTGCGGTATCTCTaGACCAGCTGCACGATGCTC +
Preference number: 4 (lower is better)
Translates to: GQGGSQCRSGLSSTSRGPPLRYL*TSCTML
Trigger: GAGCATCGTGCAGCTGGTCCAGAGATACCGCAGCGG...AGGTCCTCTTGATGTGGAGGAAAGCCCAGACCGACACTGGCTGCCACCCTGACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CCA 90 bp TCTTTCAGCAGCCTCTTCAGCGCACCCAAGTGGTCAGGGTGGCAGCCAGTGTCGGCCATCCGGTTGGGGTaGGAAGAGGGCAGCATGAAC +
Preference number: 4 (lower is better)
Translates to: SFSSLFSAPKWSGWQPVSAIRLG*EEGSMN
Trigger: GTTCATGCTGCCCTCTTCCCACCCCAACCGGATGGC...CGACACTGGCTGCCACCCTGACCACTTGGGTGCGCTGAAGAGGCTGCTGAAAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CCA 90 bp TCAGGCAGTAGGGCACTCAGTACCCTGTGGGTGGCCAATCTGCAGGAGGCACGGACCTGGCCCGCCTGCTaGATGATCTTGGCCTCAGAA +
Preference number: 4 (lower is better)
Translates to: SGSRALSTLWVANLQEARTWPAC*MILASE
Trigger: TTCTGAGGCCAAGATCATCCAGCAGGCGGGCCAGGT...CCGTGCCTCCTGCAGATTGGCCACCCACAGGGTACTGAGTGCCCTACTGCCTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CCA 90 bp TCTTTCAGCAGCCTCTTCAGCGCACCCAAGTGGTCAGGGTGGCAGCCAGTGTCGTCCTTGTCGGGAAGCTaGGCTTTCCCCAGCTGTCCC +
Preference number: 4 (lower is better)
Translates to: SFSSLFSAPKWSGWQPVSSLSGS*AFPSCP
Trigger: GGGACAGCTGGGGAAAGCCCAGCTTCCCGACAAGGA...CGACACTGGCTGCCACCCTGACCACTTGGGTGCGCTGAAGAGGCTGCTGAAAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CCA 90 bp CTCTTCAGCGCACCCAAGTGGTCAGGGTGGCAGCCAGTGTCGGTCTGGGCTTTCCCACCTGGTGGTAGATaGGAAGCAGCAGTTCCTCCC +
Preference number: 4 (lower is better)
Translates to: LFSAPKWSGWQPVSVWAFPPGGR*EAAVPP
Trigger: GGGAGGAACTGCTGCTTCCCATCTACCACCAGGTGG...GAAAGCCCAGACCGACACTGGCTGCCACCCTGACCACTTGGGTGCGCTGAAGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CCA 90 bp CAGCAGCCTCTTCAGCGCACCCAAGTGGTCAGGGTGGCAGCCAGTGTCGGTCTGTGTTTTCACGGATGGTaGAGCGCAAGCCGTCCTTGG +
Preference number: 4 (lower is better)
Translates to: QQPLQRTQVVRVAASVGLCFHGW*SASRPW
Trigger: CCAAGGACGGCTTGCGCTCCACCATCCGTGAAAACA...CAGACCGACACTGGCTGCCACCCTGACCACTTGGGTGCGCTGAAGAGGCTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
3UTR CAA 72 bp GGTGGCCAATCTGCAGGAGGCACGGAGGTCCAGTCCTaGCTCCACTTGGGAAGAGAGGGCTTACAGAGCCTG +
Preference number: 4 (lower is better)
Translates to: GGQSAGGTEVQS*LHLGREGLQSL
Trigger: CAGGCTCTGTAAGCCCTCTCTTCCCAAGTGGAGCAAGGACTGGACCTCCGTGCCTCCTGCAGATTGGCCACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR TCA 90 bp AATTATCCACTGGGACAAACCCTGAAGTCCCCAGGTGAGGAGAGGCTGGGCCCGTTCTGGTGCCGCCTCTaGATGGAACAGTCCCGTCCG +
Preference number: 4 (lower is better)
Translates to: NYPLGQTLKSPGEERLGPFWCRL*MEQSRP
Trigger: CGGACGGGACTGTTCCATTCAGAGGCGGCACCAGAA...CGGGCCCAGCCTCTCCTCACCTGGGGACTTCAGGGTTTGTCCCAGTGGATAATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR TCA 90 bp GGTCAGGGTGGCAGCCAGTGTCGGTCTGGGCTTTCCTCCACATCAAGAGGACCTACACCACCCCAAGCATaGTGTCCGGCTTCTCTGCCT +
Preference number: 4 (lower is better)
Translates to: GQGGSQCRSGLSSTSRGPTPPQA*CPASLP
Trigger: AGGCAGAGAAGCCGGACATCATGCTTGGGGTGGTGT...AGGTCCTCTTGATGTGGAGGAAAGCCCAGACCGACACTGGCTGCCACCCTGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR TCA 90 bp AATTATCCACTGGGACAAACCCTGAAGTCCCCAGGTGAGGAGAGGCTGGGCCCGGGCCACCTGGGAGTGTaGGAAGATGCAGTCCAGCAC +
Preference number: 4 (lower is better)
Translates to: NYPLGQTLKSPGEERLGPGHLGV*EDAVQH
Trigger: GTGCTGGACTGCATCTTCTCACACTCCCAGGTGGCC...CGGGCCCAGCCTCTCCTCACCTGGGGACTTCAGGGTTTGTCCCAGTGGATAATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR TCA 90 bp GTCCCTCGAAGGCCTGCCGCATGGCCATCCCACCGTCCAGGGTCCTGGGGATGGCTATCTGAGGTTGTCTaGCGGATGTTGATCTTAACC +
Preference number: 4 (lower is better)
Translates to: VPRRPAAWPSHRPGSWGWLSEVV*RMLILT
Trigger: GGTTAAGATCAACATCCGTCAGACAACCTCAGATAG...CCATCCCCAGGACCCTGGACGGTGGGATGGCCATGCGGCAGGCCTTCGAGGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR TCA 90 bp GAGCCTGGGAACCGAGGCAGTAACTCTCCTCCAGCCATGCTGAATGCTAGGTGTGGTCAGAAGGAGTGGTaGTGGGGACCGGGCTGCGAT +
Preference number: 4 (lower is better)
Translates to: EPGNRGSNSPPAMLNARCGQKEW*WGPGCD
Trigger: ATCGCAGCCCGGTCCCCATCACCACTCCTTCTGACC...ACACCTAGCATTCAGCATGGCTGGAGGAGAGTTACTGCCTCGGTTCCCAGGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR TCA 90 bp GAGCCTGGGAACCGAGGCAGTAACTCTCCTCCAGCCATGCTGAATGCTAGGTGTCCCACAGGTAGGCCTTaGCAGCGCCCTCAGTCTCCA +
Preference number: 4 (lower is better)
Translates to: EPGNRGSNSPPAMLNARCPTGRP*QRPQSP
Trigger: TGGAGACTGAGGGCGCTGTCAAGGCCTACCTGTGGG...ACACCTAGCATTCAGCATGGCTGGAGGAGAGTTACTGCCTCGGTTCCCAGGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR TCA 90 bp AATTATCCACTGGGACAAACCCTGAAGTCCCCAGGTGAGGAGAGGCTGGGCCCGCAAGCCGTCCTTGGCTaGCCAGTGCTGTTCCAGCCA +
Preference number: 4 (lower is better)
Translates to: NYPLGQTLKSPGEERLGPQAVLG*PVLFQP
Trigger: TGGCTGGAACAGCACTGGTCAGCCAAGGACGGCTTG...CGGGCCCAGCCTCTCCTCACCTGGGGACTTCAGGGTTTGTCCCAGTGGATAATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR GCA 90 bp CAGCAGCCTCTTCAGCGCACCCAAGTGGTCAGGGTGGCAGCCAGTGTCGGTCTGCTCTTGATGTGTGCCTaGTTCCTGTCCTCTCTGGAG +
Preference number: 4 (lower is better)
Translates to: QQPLQRTQVVRVAASVGLLLMCA*FLSSLE
Trigger: CTCCAGAGAGGACAGGAAGCAGGCACACATCAAGAG...CAGACCGACACTGGCTGCCACCCTGACCACTTGGGTGCGCTGAAGAGGCTGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR GCA 90 bp GAGCCTGGGAACCGAGGCAGTAACTCTCCTCCAGCCATGCTGAATGCTAGGTGTATGTCCTTCAGTCGGTaGAGGGGCACGCCCATGGCG +
Preference number: 4 (lower is better)
Translates to: EPGNRGSNSPPAMLNARCMSFSR*RGTPMA
Trigger: CGCCATGGGCGTGCCCCTGCACCGACTGAAGGACAT...ACACCTAGCATTCAGCATGGCTGGAGGAGAGTTACTGCCTCGGTTCCCAGGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR GCA 90 bp GAGCCTGGGAACCGAGGCAGTAACTCTCCTCCAGCCATGCTGAATGCTAGGTGTGCTGGTGATCCTGGCTaGAATGACGTGGCCTCGGGC +
Preference number: 4 (lower is better)
Translates to: EPGNRGSNSPPAMLNARCAGDPG*NDVASG
Trigger: GCCCGAGGCCACGTCATTGCAGCCAGGATCACCAGC...ACACCTAGCATTCAGCATGGCTGGAGGAGAGTTACTGCCTCGGTTCCCAGGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR GCA 90 bp TCAGGCAGTAGGGCACTCAGTACCCTGTGGGTGGCCAATCTGCAGGAGGCACGGTCCTCCACCGTATACTaGATCAGCTTCCCAGCCGAG +
Preference number: 4 (lower is better)
Translates to: SGSRALSTLWVANLQEARSSTVY*ISFPAE
Trigger: CTCGGCTGGGAAGCTGATGCAGTATACGGTGGAGGA...CCGTGCCTCCTGCAGATTGGCCACCCACAGGGTACTGAGTGCCCTACTGCCTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR GCA 90 bp GAGCCTGGGAACCGAGGCAGTAACTCTCCTCCAGCCATGCTGAATGCTAGGTGTACTGGGCCATCACCCTaGGGACTGCCTTCTCCACCG +
Preference number: 4 (lower is better)
Translates to: EPGNRGSNSPPAMLNARCTGPSP*GLPSPP
Trigger: CGGTGGAGAAGGCAGTCCGCAGGGTGATGGCCCAGT...ACACCTAGCATTCAGCATGGCTGGAGGAGAGTTACTGCCTCGGTTCCCAGGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR GCA 90 bp TCAGGCAGTAGGGCACTCAGTACCCTGTGGGTGGCCAATCTGCAGGAGGCACGGGGGAGTGTGAGAAGATaGAGTCCAGCACCTGGGTCA +
Preference number: 4 (lower is better)
Translates to: SGSRALSTLWVANLQEARGSVRR*SPAPGS
Trigger: TGACCCAGGTGCTGGACTGCATCTTCTCACACTCCC...CCGTGCCTCCTGCAGATTGGCCACCCACAGGGTACTGAGTGCCCTACTGCCTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR GCA 90 bp CTCTTCAGCGCACCCAAGTGGTCAGGGTGGCAGCCAGTGTCGGTCTGGGCTTTCAAGAGTTCTGTGCTGTaGCTCAGCAGGTCGGGGTTG +
Preference number: 4 (lower is better)
Translates to: LFSAPKWSGWQPVSVWAFKSSVL*LSRSGL
Trigger: CAACCCCGACCTGCTGAGGCACAGCACAGAACTCTT...GAAAGCCCAGACCGACACTGGCTGCCACCCTGACCACTTGGGTGCGCTGAAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR GCA 90 bp TCTTTCAGCAGCCTCTTCAGCGCACCCAAGTGGTCAGGGTGGCAGCCAGTGTCGTCCTTGGCTGACCAGTaGTGTTCCAGCCACTGGACC +
Preference number: 4 (lower is better)
Translates to: SFSSLFSAPKWSGWQPVSSLADQ*CSSHWT
Trigger: GGTCCAGTGGCTGGAACAGCACTGGTCAGCCAAGGA...CGACACTGGCTGCCACCCTGACCACTTGGGTGCGCTGAAGAGGCTGCTGAAAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CCA 90 bp GCTGCGGTGCCTGGCAGTGCTGGGAAAGTCTCTGTAAGCGGATCCAGAGTGTTCGGGCGGCTGTCCAGTTaGTTTGGAGTTCTGGGGAGG +
Preference number: 4 (lower is better)
Translates to: AAVPGSAGKVSVSGSRVFGRLSS*FGVLGR
Trigger: CCTCCCCAGAACTCCAAACCAACTGGACAGCCGCCC...GAACACTCTGGATCCGCTTACAGAGACTTTCCCAGCACTGCCAGGCACCGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CCA 90 bp CAAGGAACTCGGTGTGCCTGGTTCAGTTGGCCTCAGAGAGGCAGTGGCAGAATTAGCATCTGGAACCTCTaGGCCCGGGGCGGCTGTCCA +
Preference number: 4 (lower is better)
Translates to: QGTRCAWFSWPQRGSGRISIWNL*ARGGCP
Trigger: TGGACAGCCGCCCCGGGCCCAGAGGTTCCAGATGCT...AATTCTGCCACTGCCTCTCTGAGGCCAACTGAACCAGGCACACCGAGTTCCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CCA 90 bp CTCTTCAGCGCACCCAAGTGGTCAGGGTGGCAGCCAGTGTCGGTCTGGGCTTTCGCAGCTCTGGAAGTTTaGGGTTTTCCGAAGCGTGGC +
Preference number: 4 (lower is better)
Translates to: LFSAPKWSGWQPVSVWAFAALEV*GFPKRG
Trigger: GCCACGCTTCGGAAAACCCCAAACTTCCAGAGCTGC...GAAAGCCCAGACCGACACTGGCTGCCACCCTGACCACTTGGGTGCGCTGAAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CCA 90 bp GATCAGACACCGGATCCCCACCTCAGGCAAAAACCACAAGGAACTCGGTGTGCCCGTGGCCTCGGGCAATaGGAGGGCTCAAGGGGGTTT +
Preference number: 4 (lower is better)
Translates to: DQTPDPHLRQKPQGTRCARGLGQ*EGSRGF
Trigger: AAACCCCCTTGAGCCCTCCCATTGCCCGAGGCCACG...GGCACACCGAGTTCCTTGTGGTTTTTGCCTGAGGTGGGGATCCGGTGTCTGATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CCA 90 bp CTCTTCAGCGCACCCAAGTGGTCAGGGTGGCAGCCAGTGTCGGTCTGGGCTTTCATGGTGGCTATCTGCTaGCTGGGGAACTGGCATAGC +
Preference number: 4 (lower is better)
Translates to: LFSAPKWSGWQPVSVWAFMVAIC*LGNWHS
Trigger: GCTATGCCAGTTCCCCAGCCAGCAGATAGCCACCAT...GAAAGCCCAGACCGACACTGGCTGCCACCCTGACCACTTGGGTGCGCTGAAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CCA 90 bp TCTCATTCGGGTCCTGATGCTGCGGTGCCTGGCAGTGCTGGGAAAGTCTCTGTATGCAGGGTGGCGGCATaGCAGTCCAGGATGGTGGCT +
Preference number: 4 (lower is better)
Translates to: SHSGPDAAVPGSAGKVSVCRVAA*QSRMVA
Trigger: AGCCACCATCCTGGACTGCCATGCCGCCACCCTGCA...TACAGAGACTTTCCCAGCACTGCCAGGCACCGCAGCATCAGGACCCGAATGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CCA 90 bp TCAGGCAGTAGGGCACTCAGTACCCTGTGGGTGGCCAATCTGCAGGAGGCACGGAGCATGGTCACCAGCTaGTTCTTCTTGGCCACCTGG +
Preference number: 4 (lower is better)
Translates to: SGSRALSTLWVANLQEARSMVTS*FFLATW
Trigger: CCAGGTGGCCAAGAAGAACCAGCTGGTGACCATGCT...CCGTGCCTCCTGCAGATTGGCCACCCACAGGGTACTGAGTGCCCTACTGCCTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CCA 90 bp TCTCATTCGGGTCCTGATGCTGCGGTGCCTGGCAGTGCTGGGAAAGTCTCTGTACACACAGGTGCCATCTaGGAGCTCCCGGTGCTGCAG +
Preference number: 4 (lower is better)
Translates to: SHSGPDAAVPGSAGKVSVHTGAI*ELPVLQ
Trigger: CTGCAGCACCGGGAGCTCCCAGATGGCACCTGTGTG...TACAGAGACTTTCCCAGCACTGCCAGGCACCGCAGCATCAGGACCCGAATGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CCA 90 bp GTGTGCCTGGTTCAGTTGGCCTCAGAGAGGCAGTGGCAGAATTATCCACTGGGAGCACGGCCATCCGGTTaGGGTGGGAAGAGGGCAGCA +
Preference number: 4 (lower is better)
Translates to: VCLVQLASERQWQNYPLGARPSG*GGKRAA
Trigger: TGCTGCCCTCTTCCCACCCCAACCGGATGGCCGTGC...TCCCAGTGGATAATTCTGCCACTGCCTCTCTGAGGCCAACTGAACCAGGCACAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CCA 90 bp TCAGGCAGTAGGGCACTCAGTACCCTGTGGGTGGCCAATCTGCAGGAGGCACGGTTTGTGGGGATCCTCTaGGTCCACCCAAGCCACTTG +
Preference number: 4 (lower is better)
Translates to: SGSRALSTLWVANLQEARFVGIL*VHPSHL
Trigger: CAAGTGGCTTGGGTGGACCCAGAGGATCCCCACAAA...CCGTGCCTCCTGCAGATTGGCCACCCACAGGGTACTGAGTGCCCTACTGCCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CCA 90 bp GGTCAGGGTGGCAGCCAGTGTCGGTCTGGGCTTTCCTCCACATCAAGAGGACCTTGGGAGTTTTCCACCTaGATCACCCGCTGGCCAAGC +
Preference number: 4 (lower is better)
Translates to: GQGGSQCRSGLSSTSRGPWEFST*ITRWPS
Trigger: GCTTGGCCAGCGGGTGATCCAGGTGGAAAACTCCCA...AGGTCCTCTTGATGTGGAGGAAAGCCCAGACCGACACTGGCTGCCACCCTGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CCA 90 bp AATTATCCACTGGGACAAACCCTGAAGTCCCCAGGTGAGGAGAGGCTGGGCCCGTCTGGCACGGTGACGTaGGAGACCCCGTTGGTATGC +
Preference number: 4 (lower is better)
Translates to: NYPLGQTLKSPGEERLGPSGTVT*ETPLVC
Trigger: GCATACCAACGGGGTCTCCCACGTCACCGTGCCAGA...CGGGCCCAGCCTCTCCTCACCTGGGGACTTCAGGGTTTGTCCCAGTGGATAATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CCA 90 bp TCTTTCAGCAGCCTCTTCAGCGCACCCAAGTGGTCAGGGTGGCAGCCAGTGTCGCTGCAAGCATCCACCTaGGGTCGTAGGGAGCTTTGG +
Preference number: 4 (lower is better)
Translates to: SFSSLFSAPKWSGWQPVSLQAST*GRRELW
Trigger: CCAAAGCTCCCTACGACCCCAGGTGGATGCTTGCAG...CGACACTGGCTGCCACCCTGACCACTTGGGTGCGCTGAAGAGGCTGCTGAAAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CCA 90 bp GCTGCGGTGCCTGGCAGTGCTGGGAAAGTCTCTGTAAGCGGATCCAGAGTGTTCCCCGTCACCACAGTCTaGGCCCAGGGTGCCATGATT +
Preference number: 4 (lower is better)
Translates to: AAVPGSAGKVSVSGSRVFPVTTV*AQGAMI
Trigger: AATCATGGCACCCTGGGCCCAGACTGTGGTGACGGG...GAACACTCTGGATCCGCTTACAGAGACTTTCCCAGCACTGCCAGGCACCGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CCA 90 bp CCTGGTTCAGTTGGCCTCAGAGAGGCAGTGGCAGAATTATCCACTGGGACAAACTCCCGGGCCTTCAGCTaGCCCTCCAGCTCCTTCCGG +
Preference number: 4 (lower is better)
Translates to: PGSVGLREAVAELSTGTNSRAFS*PSSSFR
Trigger: CCGGAAGGAGCTGGAGGGCCAGCTGAAGGCCCGGGA...GTTTGTCCCAGTGGATAATTCTGCCACTGCCTCTCTGAGGCCAACTGAACCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR TCA 90 bp GTGTGCCTGGTTCAGTTGGCCTCAGAGAGGCAGTGGCAGAATTATCCACTGGGACGGAGGCCTCTGGCATaGGCTTGGCAGGGAGTTCCT +
Preference number: 4 (lower is better)
Translates to: VCLVQLASERQWQNYPLGRRPLA*AWQGVP
Trigger: AGGAACTCCCTGCCAAGCTCATGCCAGAGGCCTCCG...TCCCAGTGGATAATTCTGCCACTGCCTCTCTGAGGCCAACTGAACCAGGCACAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR TCA 90 bp GTCCCTCGAAGGCCTGCCGCATGGCCATCCCACCGTCCAGGGTCCTGGGGATGGTCTTGGCAATGTCTATaGTCAGCTCAACATTGGCAT +
Preference number: 4 (lower is better)
Translates to: VPRRPAAWPSHRPGSWGWSWQCL*SAQHWH
Trigger: ATGCCAATGTTGAGCTGATCATAGACATTGCCAAGA...CCATCCCCAGGACCCTGGACGGTGGGATGGCCATGCGGCAGGCCTTCGAGGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR TCA 90 bp GGTCAGGGTGGCAGCCAGTGTCGGTCTGGGCTTTCCTCCACATCAAGAGGACCTGCGCAGCAGGCAGGTTaGCATCTGCGATCATTTCAG +
Preference number: 4 (lower is better)
Translates to: GQGGSQCRSGLSSTSRGPAQQAG*HLRSFQ
Trigger: CTGAAATGATCGCAGATGTCAACCTGCCTGCTGCGC...AGGTCCTCTTGATGTGGAGGAAAGCCCAGACCGACACTGGCTGCCACCCTGACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR TCA 90 bp TCTCATTCGGGTCCTGATGCTGCGGTGCCTGGCAGTGCTGGGAAAGTCTCTGTACAGCAGCGGCCACGCTaGAGTAACCCCACACGTTCT +
Preference number: 4 (lower is better)
Translates to: SHSGPDAAVPGSAGKVSVQQRPR*SNPTRS
Trigger: AGAACGTGTGGGGTTACTTCAGCGTGGCCGCTGCTG...TACAGAGACTTTCCCAGCACTGCCAGGCACCGCAGCATCAGGACCCGAATGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR TCA 90 bp CAAGGAACTCGGTGTGCCTGGTTCAGTTGGCCTCAGAGAGGCAGTGGCAGAATTTCAGCAGGGAGGACCTaGCCCCTTTCCAGGGAGTGC +
Preference number: 4 (lower is better)
Translates to: QGTRCAWFSWPQRGSGRISAGRT*PLSREC
Trigger: GCACTCCCTGGAAAGGGGTCAGGTCCTCCCTGCTGA...AATTCTGCCACTGCCTCTCTGAGGCCAACTGAACCAGGCACACCGAGTTCCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR TCA 90 bp TCTCATTCGGGTCCTGATGCTGCGGTGCCTGGCAGTGCTGGGAAAGTCTCTGTAGCCGGAGCGTCATCATaGGCTTCTGGACCCAGTCCT +
Preference number: 4 (lower is better)
Translates to: SHSGPDAAVPGSAGKVSVAGASS*ASGPSP
Trigger: AGGACTGGGTCCAGAAGCTCATGATGACGCTCCGGC...TACAGAGACTTTCCCAGCACTGCCAGGCACCGCAGCATCAGGACCCGAATGAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR TCA 90 bp GAGCCTGGGAACCGAGGCAGTAACTCTCCTCCAGCCATGCTGAATGCTAGGTGTGCCGGAGCGTCATCATaGGCTTCTGGACCCAGTCCT +
Preference number: 4 (lower is better)
Translates to: EPGNRGSNSPPAMLNARCAGASS*ASGPSP
Trigger: AGGACTGGGTCCAGAAGCTCATGATGACGCTCCGGC...ACACCTAGCATTCAGCATGGCTGGAGGAGAGTTACTGCCTCGGTTCCCAGGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR TCA 90 bp TCTTTCAGCAGCCTCTTCAGCGCACCCAAGTGGTCAGGGTGGCAGCCAGTGTCGCTTGCTGTCTTCCTCTaGGTACAGGGAAGTGCACGC +
Preference number: 4 (lower is better)
Translates to: SFSSLFSAPKWSGWQPVSLAVFL*VQGSAR
Trigger: GCGTGCACTTCCCTGTACTCAGAGGAAGACAGCAAG...CGACACTGGCTGCCACCCTGACCACTTGGGTGCGCTGAAGAGGCTGCTGAAAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR GCA 90 bp GCTGCGGTGCCTGGCAGTGCTGGGAAAGTCTCTGTAAGCGGATCCAGAGTGTTCTGGTCGCCATGTTCCTaGAGCTGTTCCCCTGACAGC +
Preference number: 4 (lower is better)
Translates to: AAVPGSAGKVSVSGSRVFWSPCS*SCSPDS
Trigger: GCTGTCAGGGGAACAGCTGCAGGAACATGGCGACCA...GAACACTCTGGATCCGCTTACAGAGACTTTCCCAGCACTGCCAGGCACCGCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR GCA 90 bp TTTGCAGCTCTTTCAGCAGCCTCTTCAGCGCACCCAAGTGGTCAGGGTGGCAGCCTGCACTCTCAGCCTTaGGGATACCTTTCCCGCCTC +
Preference number: 4 (lower is better)
Translates to: FAALSAASSAHPSGQGGSLHSQP*GYLSRL
Trigger: GAGGCGGGAAAGGTATCCGCAAGGCTGAGAGTGCAG...GCTGCCACCCTGACCACTTGGGTGCGCTGAAGAGGCTGCTGAAAGAGCTGCAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR GCA 90 bp GAGCCTGGGAACCGAGGCAGTAACTCTCCTCCAGCCATGCTGAATGCTAGGTGTGACCTCCAGGTGCCGTaGGTTCTGGGCCAGCTTCAT +
Preference number: 4 (lower is better)
Translates to: EPGNRGSNSPPAMLNARCDLQVP*VLGQLH
Trigger: ATGAAGCTGGCCCAGAACGCACGGCACCTGGAGGTC...ACACCTAGCATTCAGCATGGCTGGAGGAGAGTTACTGCCTCGGTTCCCAGGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR GCA 90 bp GCTGCGGTGCCTGGCAGTGCTGGGAAAGTCTCTGTAAGCGGATCCAGAGTGTTCATTTCAGTGCACGGATaGTCCACCTGCAGGCGTGGG +
Preference number: 4 (lower is better)
Translates to: AAVPGSAGKVSVSGSRVFISVHG*STCRRG
Trigger: CCCACGCCTGCAGGTGGAGCATCCGTGCACTGAAAT...GAACACTCTGGATCCGCTTACAGAGACTTTCCCAGCACTGCCAGGCACCGCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR GCA 90 bp GTGTGCCTGGTTCAGTTGGCCTCAGAGAGGCAGTGGCAGAATTATCCACTGGGAGCTGGTGATCCTGGCTaGAATGACGTGGCCTCGGGC +
Preference number: 4 (lower is better)
Translates to: VCLVQLASERQWQNYPLGAGDPG*NDVASG
Trigger: GCCCGAGGCCACGTCATTGCAGCCAGGATCACCAGC...TCCCAGTGGATAATTCTGCCACTGCCTCTCTGAGGCCAACTGAACCAGGCACAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR GCA 90 bp CTCTTCAGCGCACCCAAGTGGTCAGGGTGGCAGCCAGTGTCGGTCTGGGCTTTCCCCACACGTTCTTGTTaGTGCGGAAGTTCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: LFSAPKWSGWQPVSVWAFPTRSC*CGSSAP
Trigger: AGGAGCTGAACTTCCGCAGCAACAAGAACGTGTGGG...GAAAGCCCAGACCGACACTGGCTGCCACCCTGACCACTTGGGTGCGCTGAAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR GCA 90 bp GATCAGACACCGGATCCCCACCTCAGGCAAAAACCACAAGGAACTCGGTGTGCCCCCCAGGAGAAGCAGTaGCCAAACTGGGAATCGGCG +
Preference number: 4 (lower is better)
Translates to: DQTPDPHLRQKPQGTRCAPQEKQ*PNWESA
Trigger: CGCCGATTCCCAGTTTGGGCACTGCTTCTCCTGGGG...GGCACACCGAGTTCCTTGTGGTTTTTGCCTGAGGTGGGGATCCGGTGTCTGATC
59% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR GCA 90 bp GATCAGACACCGGATCCCCACCTCAGGCAAAAACCACAAGGAACTCGGTGTGCCGATGTCCGGCTTCTCTaGCTGCACCCGCTGAGCGAT +
Preference number: 4 (lower is better)
Translates to: DQTPDPHLRQKPQGTRCADVRLL*LHPLSD
Trigger: ATCGCTCAGCGGGTGCAGGCAGAGAAGCCGGACATC...GGCACACCGAGTTCCTTGTGGTTTTTGCCTGAGGTGGGGATCCGGTGTCTGATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR GCA 90 bp CAGCAGCCTCTTCAGCGCACCCAAGTGGTCAGGGTGGCAGCCAGTGTCGGTCTGTATCTCTGGACCAGCTaGACGATGCTCTGTGTGTTC +
Preference number: 4 (lower is better)
Translates to: QQPLQRTQVVRVAASVGLYLWTS*TMLCVF
Trigger: GAACACACAGAGCATCGTGCAGCTGGTCCAGAGATA...CAGACCGACACTGGCTGCCACCCTGACCACTTGGGTGCGCTGAAGAGGCTGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR GCA 90 bp GAGCCTGGGAACCGAGGCAGTAACTCTCCTCCAGCCATGCTGAATGCTAGGTGTTCTGGGAGCTCCCGGTaGTGCAGGCTGTTTAGCTCG +
Preference number: 4 (lower is better)
Translates to: EPGNRGSNSPPAMLNARCSGSSR*CRLFSS
Trigger: CGAGCTAAACAGCCTGCAGCACCGGGAGCTCCCAGA...ACACCTAGCATTCAGCATGGCTGGAGGAGAGTTACTGCCTCGGTTCCCAGGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR GCA 90 bp TTTGCAGCTCTTTCAGCAGCCTCTTCAGCGCACCCAAGTGGTCAGGGTGGCAGCGGTAGATTTGGGGGATaGCCTCTGTCCGGGCCATCT +
Preference number: 4 (lower is better)
Translates to: FAALSAASSAHPSGQGGSGRFGG*PLSGPS
Trigger: AGATGGCCCGGACAGAGGGCATCCCCCAAATCTACC...GCTGCCACCCTGACCACTTGGGTGCGCTGAAGAGGCTGCTGAAAGAGCTGCAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR GCA 90 bp GTGTGCCTGGTTCAGTTGGCCTCAGAGAGGCAGTGGCAGAATTATCCACTGGGATCACTCCCACAGGGATaGCCCCCAGCCTTGCTCGTC +
Preference number: 4 (lower is better)
Translates to: VCLVQLASERQWQNYPLGSLPQG*PPALLV
Trigger: GACGAGCAAGGCTGGGGGGCATCCCTGTGGGAGTGA...TCCCAGTGGATAATTCTGCCACTGCCTCTCTGAGGCCAACTGAACCAGGCACAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR GCA 90 bp CAAGGAACTCGGTGTGCCTGGTTCAGTTGGCCTCAGAGAGGCAGTGGCAGAATTTGGCCCGGGGTGTCGTaGAGGTCTGCGAACTGCACT +
Preference number: 4 (lower is better)
Translates to: QGTRCAWFSWPQRGSGRIWPGVS*RSANCT
Trigger: AGTGCAGTTCGCAGACCTGCACGACACCCCGGGCCA...AATTCTGCCACTGCCTCTCTGAGGCCAACTGAACCAGGCACACCGAGTTCCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CCA 90 bp GATCAGACACCGGATCCCCACCTCAGGCAAAAACCACAAGGAACTCGGTGTGCCGGGCGGCTGTCCAGTTaGTTTGGAGTTCTGGGGAGG +
Preference number: 4 (lower is better)
Translates to: DQTPDPHLRQKPQGTRCAGRLSS*FGVLGR
Trigger: CCTCCCCAGAACTCCAAACCAACTGGACAGCCGCCC...GGCACACCGAGTTCCTTGTGGTTTTTGCCTGAGGTGGGGATCCGGTGTCTGATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CCA 90 bp TCTCATTCGGGTCCTGATGCTGCGGTGCCTGGCAGTGCTGGGAAAGTCTCTGTACAACCCATTAGCATCTaGAACCTCTGGGCCCGGGGC +
Preference number: 4 (lower is better)
Translates to: SHSGPDAAVPGSAGKVSVQPISI*NLWARG
Trigger: GCCCCGGGCCCAGAGGTTCCAGATGCTAATGGGTTG...TACAGAGACTTTCCCAGCACTGCCAGGCACCGCAGCATCAGGACCCGAATGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CCA 90 bp GAGCCTGGGAACCGAGGCAGTAACTCTCCTCCAGCCATGCTGAATGCTAGGTGTATGGGCAGAGTCTGCTaGGCAGGGAGCTCCCCAGTA +
Preference number: 4 (lower is better)
Translates to: EPGNRGSNSPPAMLNARCMGRVC*AGSSPV
Trigger: TACTGGGGAGCTCCCTGCCCAGCAGACTCTGCCCAT...ACACCTAGCATTCAGCATGGCTGGAGGAGAGTTACTGCCTCGGTTCCCAGGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CCA 90 bp AATTATCCACTGGGACAAACCCTGAAGTCCCCAGGTGAGGAGAGGCTGGGCCCGTGCTGGCTGGGGAACTaGCATAGCACGGAGGTGATG +
Preference number: 4 (lower is better)
Translates to: NYPLGQTLKSPGEERLGPCWLGN*HSTEVM
Trigger: CATCACCTCCGTGCTATGCCAGTTCCCCAGCCAGCA...CGGGCCCAGCCTCTCCTCACCTGGGGACTTCAGGGTTTGTCCCAGTGGATAATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CCA 90 bp TCTCATTCGGGTCCTGATGCTGCGGTGCCTGGCAGTGCTGGGAAAGTCTCTGTAGGCAGTCCAGGATGGTaGCTATCTGCTGGCTGGGGA +
Preference number: 4 (lower is better)
Translates to: SHSGPDAAVPGSAGKVSVGSPGW*LSAGWG
Trigger: TCCCCAGCCAGCAGATAGCCACCATCCTGGACTGCC...TACAGAGACTTTCCCAGCACTGCCAGGCACCGCAGCATCAGGACCCGAATGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CCA 90 bp AATTATCCACTGGGACAAACCCTGAAGTCCCCAGGTGAGGAGAGGCTGGGCCCGCATGGCAGTCCAGGATaGTGGCTATCTGCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: NYPLGQTLKSPGEERLGPHGSPG*WLSAGW
Trigger: CCAGCCAGCAGATAGCCACCATCCTGGACTGCCATG...CGGGCCCAGCCTCTCCTCACCTGGGGACTTCAGGGTTTGTCCCAGTGGATAATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CCA 90 bp GCTGCGGTGCCTGGCAGTGCTGGGAAAGTCTCTGTAAGCGGATCCAGAGTGTTCCATGGCAGTCCAGGATaGTGGCTATCTGCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: AAVPGSAGKVSVSGSRVFHGSPG*WLSAGW
Trigger: CCAGCCAGCAGATAGCCACCATCCTGGACTGCCATG...GAACACTCTGGATCCGCTTACAGAGACTTTCCCAGCACTGCCAGGCACCGCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CCA 90 bp GCCTCAGAGAGGCAGTGGCAGAATTATCCACTGGGACAAACCCTGAAGTCCCCACCTTACGCTGCAGGGTaGCGGCATGGCAGTCCAGGA +
Preference number: 4 (lower is better)
Translates to: ASERQWQNYPLGQTLKSPPYAAG*RHGSPG
Trigger: TCCTGGACTGCCATGCCGCCACCCTGCAGCGTAAGG...TGGGGACTTCAGGGTTTGTCCCAGTGGATAATTCTGCCACTGCCTCTCTGAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CCA 90 bp TCTTTCAGCAGCCTCTTCAGCGCACCCAAGTGGTCAGGGTGGCAGCCAGTGTCGCCAGCTGGTTCTTCTTaGCCACCTGGGAGTGTGAGA +
Preference number: 4 (lower is better)
Translates to: SFSSLFSAPKWSGWQPVSPAGSS*PPGSVR
Trigger: TCTCACACTCCCAGGTGGCCAAGAAGAACCAGCTGG...CGACACTGGCTGCCACCCTGACCACTTGGGTGCGCTGAAGAGGCTGCTGAAAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CCA 90 bp CCTGGTTCAGTTGGCCTCAGAGAGGCAGTGGCAGAATTATCCACTGGGACAAACGCTCGTCTGACAGGGTaGGGTCTGGGCCGCACAGCT +
Preference number: 4 (lower is better)
Translates to: PGSVGLREAVAELSTGTNARLTG*GLGRTA
Trigger: AGCTGTGCGGCCCAGACCCCACCCTGTCAGACGAGC...GTTTGTCCCAGTGGATAATTCTGCCACTGCCTCTCTGAGGCCAACTGAACCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CCA 90 bp AATTATCCACTGGGACAAACCCTGAAGTCCCCAGGTGAGGAGAGGCTGGGCCCGCATCCGCTGGCACAGTaGGGAGAAGCCACTGTCCAT +
Preference number: 4 (lower is better)
Translates to: NYPLGQTLKSPGEERLGPHPLAQ*GEATVH
Trigger: ATGGACAGTGGCTTCTCCCCACTGTGCCAGCGGATG...CGGGCCCAGCCTCTCCTCACCTGGGGACTTCAGGGTTTGTCCCAGTGGATAATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CCA 90 bp TCAGGCAGTAGGGCACTCAGTACCCTGTGGGTGGCCAATCTGCAGGAGGCACGGCATTCAGGATGTGGATaGGTTCCTCTCGGAGGCTCT +
Preference number: 4 (lower is better)
Translates to: SGSRALSTLWVANLQEARHSGCG*VPLGGS
Trigger: AGAGCCTCCGAGAGGAACCCATCCACATCCTGAATG...CCGTGCCTCCTGCAGATTGGCCACCCACAGGGTACTGAGTGCCCTACTGCCTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CCA 90 bp CTCTTCAGCGCACCCAAGTGGTCAGGGTGGCAGCCAGTGTCGGTCTGGGCTTTCTGGAATCGCTTAGCCTaGAGCAGGTCCTTGGTGACA +
Preference number: 4 (lower is better)
Translates to: LFSAPKWSGWQPVSVWAFWNRLA*SRSLVT
Trigger: TGTCACCAAGGACCTGCTCCAGGCTAAGCGATTCCA...GAAAGCCCAGACCGACACTGGCTGCCACCCTGACCACTTGGGTGCGCTGAAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CCA 90 bp AATTATCCACTGGGACAAACCCTGAAGTCCCCAGGTGAGGAGAGGCTGGGCCCGACCTGGCCCGCCTGCTaGATGATCTTGGCCTCAGAA +
Preference number: 4 (lower is better)
Translates to: NYPLGQTLKSPGEERLGPTWPAC*MILASE
Trigger: TTCTGAGGCCAAGATCATCCAGCAGGCGGGCCAGGT...CGGGCCCAGCCTCTCCTCACCTGGGGACTTCAGGGTTTGTCCCAGTGGATAATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR TCA 90 bp GCCTCAGAGAGGCAGTGGCAGAATTATCCACTGGGACAAACCCTGAAGTCCCCACCGGAGCCTCCTCAATaGTCTTCTGGTGCCGCCTCT +
Preference number: 4 (lower is better)
Translates to: ASERQWQNYPLGQTLKSPPEPPQ*SSGAAS
Trigger: AGAGGCGGCACCAGAAGATCATTGAGGAGGCTCCGG...TGGGGACTTCAGGGTTTGTCCCAGTGGATAATTCTGCCACTGCCTCTCTGAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR TCA 90 bp TCAGGCAGTAGGGCACTCAGTACCCTGTGGGTGGCCAATCTGCAGGAGGCACGGGCACGTTCAGGGTCATaGTCATCTTCATCACCTCCA +
Preference number: 4 (lower is better)
Translates to: SGSRALSTLWVANLQEARARSGS*SSSSPP
Trigger: TGGAGGTGATGAAGATGATCATGACCCTGAACGTGC...CCGTGCCTCCTGCAGATTGGCCACCCACAGGGTACTGAGTGCCCTACTGCCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR TCA 90 bp TCTCATTCGGGTCCTGATGCTGCGGTGCCTGGCAGTGCTGGGAAAGTCTCTGTATTCTGCTCAGCTGCGTaGGCTCACAGAGGATGGAGG +
Preference number: 4 (lower is better)
Translates to: SHSGPDAAVPGSAGKVSVFCSAA*AHRGWR
Trigger: CCTCCATCCTCTGTGAGCTCACGCAGCTGAGCAGAA...TACAGAGACTTTCCCAGCACTGCCAGGCACCGCAGCATCAGGACCCGAATGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR TCA 90 bp CAGCAGCCTCTTCAGCGCACCCAAGTGGTCAGGGTGGCAGCCAGTGTCGGTCTGTGGCAAAGCAGGAGATaGCTTCATCAAAGTTCCTGG +
Preference number: 4 (lower is better)
Translates to: QQPLQRTQVVRVAASVGLWQSRR*LHQSSW
Trigger: CCAGGAACTTTGATGAAGTCATCTCCTGCTTTGCCA...CAGACCGACACTGGCTGCCACCCTGACCACTTGGGTGCGCTGAAGAGGCTGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR TCA 90 bp GCTGCGGTGCCTGGCAGTGCTGGGAAAGTCTCTGTAAGCGGATCCAGAGTGTTCCTTGCTGTCTTCCTCTaGGTACAGGGAAGTGCACGC +
Preference number: 4 (lower is better)
Translates to: AAVPGSAGKVSVSGSRVFLAVFL*VQGSAR
Trigger: GCGTGCACTTCCCTGTACTCAGAGGAAGACAGCAAG...GAACACTCTGGATCCGCTTACAGAGACTTTCCCAGCACTGCCAGGCACCGCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR TCA 90 bp GAGCCTGGGAACCGAGGCAGTAACTCTCCTCCAGCCATGCTGAATGCTAGGTGTGCACACTGGTGTTGTTaGACGCCACCTCCAGCTCGT +
Preference number: 4 (lower is better)
Translates to: EPGNRGSNSPPAMLNARCAHWCC*TPPPAR
Trigger: ACGAGCTGGAGGTGGCGTTCAACAACACCAGTGTGC...ACACCTAGCATTCAGCATGGCTGGAGGAGAGTTACTGCCTCGGTTCCCAGGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR TCA 90 bp TCTCATTCGGGTCCTGATGCTGCGGTGCCTGGCAGTGCTGGGAAAGTCTCTGTAGCACACTGGTGTTGTTaGACGCCACCTCCAGCTCGT +
Preference number: 4 (lower is better)
Translates to: SHSGPDAAVPGSAGKVSVAHWCC*TPPPAR
Trigger: ACGAGCTGGAGGTGGCGTTCAACAACACCAGTGTGC...TACAGAGACTTTCCCAGCACTGCCAGGCACCGCAGCATCAGGACCCGAATGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR TCA 90 bp CAAGGAACTCGGTGTGCCTGGTTCAGTTGGCCTCAGAGAGGCAGTGGCAGAATTGTGGTAGACAGCAGCTaGGCCACCTGTATCCGCTCG +
Preference number: 4 (lower is better)
Translates to: QGTRCAWFSWPQRGSGRIVVDSS*ATCIRS
Trigger: CGAGCGGATACAGGTGGCTCAGCTGCTGTCTACCAC...AATTCTGCCACTGCCTCTCTGAGGCCAACTGAACCAGGCACACCGAGTTCCTTG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR GCA 90 bp GAGCCTGGGAACCGAGGCAGTAACTCTCCTCCAGCCATGCTGAATGCTAGGTGTTGGTCGCCATGTTCCTaGAGCTGTTCCCCTGACAGC +
Preference number: 4 (lower is better)
Translates to: EPGNRGSNSPPAMLNARCWSPCS*SCSPDS
Trigger: GCTGTCAGGGGAACAGCTGCAGGAACATGGCGACCA...ACACCTAGCATTCAGCATGGCTGGAGGAGAGTTACTGCCTCGGTTCCCAGGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR GCA 90 bp GCCTCAGAGAGGCAGTGGCAGAATTATCCACTGGGACAAACCCTGAAGTCCCCAGACCTCCAGGTGCCGTaGGTTCTGGGCCAGCTTCAT +
Preference number: 4 (lower is better)
Translates to: ASERQWQNYPLGQTLKSPDLQVP*VLGQLH
Trigger: ATGAAGCTGGCCCAGAACGCACGGCACCTGGAGGTC...TGGGGACTTCAGGGTTTGTCCCAGTGGATAATTCTGCCACTGCCTCTCTGAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR GCA 90 bp TCAGGCAGTAGGGCACTCAGTACCCTGTGGGTGGCCAATCTGCAGGAGGCACGGGTTTCCATACTGATCTaGCAAGACCTGGACCTCCAG +
Preference number: 4 (lower is better)
Translates to: SGSRALSTLWVANLQEARVSILI*QDLDLQ
Trigger: CTGGAGGTCCAGGTCTTGGCAGATCAGTATGGAAAC...CCGTGCCTCCTGCAGATTGGCCACCCACAGGGTACTGAGTGCCCTACTGCCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR GCA 90 bp CTCTTCAGCGCACCCAAGTGGTCAGGGTGGCAGCCAGTGTCGGTCTGGGCTTTCCCAGGAAGTGGAAGCTaGCATCCTGGCTGTATAAGT +
Preference number: 4 (lower is better)
Translates to: LFSAPKWSGWQPVSVWAFPGSGS*HPGCIS
Trigger: ACTTATACAGCCAGGATGGCAGCTTCCACTTCCTGG...GAAAGCCCAGACCGACACTGGCTGCCACCCTGACCACTTGGGTGCGCTGAAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR GCA 90 bp TCAGGCAGTAGGGCACTCAGTACCCTGTGGGTGGCCAATCTGCAGGAGGCACGGCCAGGAAGTGGAAGCTaGCATCCTGGCTGTATAAGT +
Preference number: 4 (lower is better)
Translates to: SGSRALSTLWVANLQEARPGSGS*HPGCIS
Trigger: ACTTATACAGCCAGGATGGCAGCTTCCACTTCCTGG...CCGTGCCTCCTGCAGATTGGCCACCCACAGGGTACTGAGTGCCCTACTGCCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR GCA 90 bp CTCTTCAGCGCACCCAAGTGGTCAGGGTGGCAGCCAGTGTCGGTCTGGGCTTTCAGGCAGGTTGACATCTaGGATCATTTCAGTGCACGG +
Preference number: 4 (lower is better)
Translates to: LFSAPKWSGWQPVSVWAFRQVDI*DHFSAR
Trigger: CCGTGCACTGAAATGATCGCAGATGTCAACCTGCCT...GAAAGCCCAGACCGACACTGGCTGCCACCCTGACCACTTGGGTGCGCTGAAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR GCA 90 bp TTTGCAGCTCTTTCAGCAGCCTCTTCAGCGCACCCAAGTGGTCAGGGTGGCAGCATGGCGATCTGCAACTaGGCAGCAGGCAGGTTGACA +
Preference number: 4 (lower is better)
Translates to: FAALSAASSAHPSGQGGSMAICN*AAGRLT
Trigger: TGTCAACCTGCCTGCTGCGCAGTTGCAGATCGCCAT...GCTGCCACCCTGACCACTTGGGTGCGCTGAAGAGGCTGCTGAAAGAGCTGCAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR GCA 90 bp GCCTCAGAGAGGCAGTGGCAGAATTATCCACTGGGACAAACCCTGAAGTCCCCACCCCAGGAGAAGCAGTaGCCAAACTGGGAATCGGCG +
Preference number: 4 (lower is better)
Translates to: ASERQWQNYPLGQTLKSPPQEKQ*PNWESA
Trigger: CGCCGATTCCCAGTTTGGGCACTGCTTCTCCTGGGG...TGGGGACTTCAGGGTTTGTCCCAGTGGATAATTCTGCCACTGCCTCTCTGAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR GCA 90 bp GTGTGCCTGGTTCAGTTGGCCTCAGAGAGGCAGTGGCAGAATTATCCACTGGGAGATGTCCGGCTTCTCTaGCTGCACCCGCTGAGCGAT +
Preference number: 4 (lower is better)
Translates to: VCLVQLASERQWQNYPLGDVRLL*LHPLSD
Trigger: ATCGCTCAGCGGGTGCAGGCAGAGAAGCCGGACATC...TCCCAGTGGATAATTCTGCCACTGCCTCTCTGAGGCCAACTGAACCAGGCACAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR GCA 90 bp TCTTTCAGCAGCCTCTTCAGCGCACCCAAGTGGTCAGGGTGGCAGCCAGTGTCGCCCCTTTCCAGGGAGTaGAAGAATTCCGTCATGCAG +
Preference number: 4 (lower is better)
Translates to: SFSSLFSAPKWSGWQPVSPLSRE*KNSVMQ
Trigger: CTGCATGACGGAATTCTTGCACTCCCTGGAAAGGGG...CGACACTGGCTGCCACCCTGACCACTTGGGTGCGCTGAAGAGGCTGCTGAAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR GCA 90 bp CAAGGAACTCGGTGTGCCTGGTTCAGTTGGCCTCAGAGAGGCAGTGGCAGAATTACCCGGCCGCTCTCCTaGACGTTCAGGGTCATGATC +
Preference number: 4 (lower is better)
Translates to: QGTRCAWFSWPQRGSGRITRPLS*TFRVMI
Trigger: GATCATGACCCTGAACGTGCAGGAGAGCGGCCGGGT...AATTCTGCCACTGCCTCTCTGAGGCCAACTGAACCAGGCACACCGAGTTCCTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR GCA 90 bp CTTTCCTCCACATCAAGAGGACCTTGCCCAGAAGAACCCTTTATCCCCCAAGAACATCACCCTGCGGACTaGCTTCTCCACCGGGGCGGG +
Preference number: 4 (lower is better)
Translates to: LSSTSRGPCPEEPFIPQEHHPAD*LLHRGG
Trigger: CCCGCCCCGGTGGAGAAGGCAGTCCGCAGGGTGATG...TTCTTGGGGGATAAAGGGTTCTTCTGGGCAAGGTCCTCTTGATGTGGAGGAAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR GCA 90 bp TCTCATTCGGGTCCTGATGCTGCGGTGCCTGGCAGTGCTGGGAAAGTCTCTGTAGGTAGATTTGGGGGATaGCCTCTGTCCGGGCCATCT +
Preference number: 4 (lower is better)
Translates to: SHSGPDAAVPGSAGKVSVGRFGG*PLSGPS
Trigger: AGATGGCCCGGACAGAGGGCATCCCCCAAATCTACC...TACAGAGACTTTCCCAGCACTGCCAGGCACCGCAGCATCAGGACCCGAATGAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR GCA 90 bp GCCTCAGAGAGGCAGTGGCAGAATTATCCACTGGGACAAACCCTGAAGTCCCCAGAGTTGGGTGAGGCCTaGCTGCAAGCATCCACCTGG +
Preference number: 4 (lower is better)
Translates to: ASERQWQNYPLGQTLKSPELGEA*LQASTW
Trigger: CCAGGTGGATGCTTGCAGGCAGGCCTCACCCAACTC...TGGGGACTTCAGGGTTTGTCCCAGTGGATAATTCTGCCACTGCCTCTCTGAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR GCA 90 bp CTCTTCAGCGCACCCAAGTGGTCAGGGTGGCAGCCAGTGTCGGTCTGGGCTTTCAGTCTGGGCCCAGGGTaGCATGATTTCCTTGAAACT +
Preference number: 4 (lower is better)
Translates to: LFSAPKWSGWQPVSVWAFSLGPG*HDFLET
Trigger: AGTTTCAAGGAAATCATGGCACCCTGGGCCCAGACT...GAAAGCCCAGACCGACACTGGCTGCCACCCTGACCACTTGGGTGCGCTGAAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CCA 90 bp CAAGGAACTCGGTGTGCCTGGTTCAGTTGGCCTCAGAGAGGCAGTGGCAGAATTCAACCCATTAGCATCTaGAACCTCTGGGCCCGGGGC +
Preference number: 4 (lower is better)
Translates to: QGTRCAWFSWPQRGSGRIQPISI*NLWARG
Trigger: GCCCCGGGCCCAGAGGTTCCAGATGCTAATGGGTTG...AATTCTGCCACTGCCTCTCTGAGGCCAACTGAACCAGGCACACCGAGTTCCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CCA 90 bp CTTTCCTCCACATCAAGAGGACCTTGCCCAGAAGAACCCTTTATCCCCCAAGAAGGGGATACTGTCCTCTaGCTCGGGGGCCTGGCTGGG +
Preference number: 4 (lower is better)
Translates to: LSSTSRGPCPEEPFIPQEGDTVL*LGGLAG
Trigger: CCCAGCCAGGCCCCCGAGCCAGAGGACAGTATCCCC...TTCTTGGGGGATAAAGGGTTCTTCTGGGCAAGGTCCTCTTGATGTGGAGGAAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CCA 90 bp GCTGCGGTGCCTGGCAGTGCTGGGAAAGTCTCTGTAAGCGGATCCAGAGTGTTCTCTGCGCTACGATGGTaGAGGCGATCTTGTCTCCCA +
Preference number: 4 (lower is better)
Translates to: AAVPGSAGKVSVSGSRVFSALRW*RRSCLP
Trigger: TGGGAGACAAGATCGCCTCCACCATCGTAGCGCAGA...GAACACTCTGGATCCGCTTACAGAGACTTTCCCAGCACTGCCAGGCACCGCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CCA 90 bp TCTTTCAGCAGCCTCTTCAGCGCACCCAAGTGGTCAGGGTGGCAGCCAGTGTCGAGGTGCCGTGCGTTCTaGGCCAGCTTCATTAGAAAG +
Preference number: 4 (lower is better)
Translates to: SFSSLFSAPKWSGWQPVSRCRAF*ASFIRK
Trigger: CTTTCTAATGAAGCTGGCCCAGAACGCACGGCACCT...CGACACTGGCTGCCACCCTGACCACTTGGGTGCGCTGAAGAGGCTGCTGAAAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CCA 90 bp TCTTTCAGCAGCCTCTTCAGCGCACCCAAGTGGTCAGGGTGGCAGCCAGTGTCGGCATCGATCTCGATGTaGCAGCCGTTCATGATGAGG +
Preference number: 4 (lower is better)
Translates to: SFSSLFSAPKWSGWQPVSASISM*QPFMMR
Trigger: CCTCATCATGAACGGCTGCCACATCGAGATCGATGC...CGACACTGGCTGCCACCCTGACCACTTGGGTGCGCTGAAGAGGCTGCTGAAAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CCA 90 bp GCCTCAGAGAGGCAGTGGCAGAATTATCCACTGGGACAAACCCTGAAGTCCCCAATGGGCAGAGTCTGCTaGGCAGGGAGCTCCCCAGTA +
Preference number: 4 (lower is better)
Translates to: ASERQWQNYPLGQTLKSPMGRVC*AGSSPV
Trigger: TACTGGGGAGCTCCCTGCCCAGCAGACTCTGCCCAT...TGGGGACTTCAGGGTTTGTCCCAGTGGATAATTCTGCCACTGCCTCTCTGAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CCA 90 bp TCTCATTCGGGTCCTGATGCTGCGGTGCCTGGCAGTGCTGGGAAAGTCTCTGTATGGCTATCTGCTGGCTaGGGAACTGGCATAGCACGG +
Preference number: 4 (lower is better)
Translates to: SHSGPDAAVPGSAGKVSVWLSAG*GTGIAR
Trigger: CCGTGCTATGCCAGTTCCCCAGCCAGCAGATAGCCA...TACAGAGACTTTCCCAGCACTGCCAGGCACCGCAGCATCAGGACCCGAATGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CCA 90 bp GCCTGGTTCAGTTGGCCTCAGAGAGGCAGTGGCAGAATTATCCACTGGGACAAATGCAGGGTGGCGGCATaGCAGTCCAGGATGGTGGCT +
Preference number: 4 (lower is better)
Translates to: AWFSWPQRGSGRIIHWDKCRVAA*QSRMVA
Trigger: AGCCACCATCCTGGACTGCCATGCCGCCACCCTGCA...TTTGTCCCAGTGGATAATTCTGCCACTGCCTCTCTGAGGCCAACTGAACCAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CCA 90 bp AATTATCCACTGGGACAAACCCTGAAGTCCCCAGGTGAGGAGAGGCTGGGCCCGATGCAGTCCAGCACCTaGGTCATGTCCGGCTTGAAC +
Preference number: 4 (lower is better)
Translates to: NYPLGQTLKSPGEERLGPMQSST*VMSGLN
Trigger: GTTCAAGCCGGACATGACCCAGGTGCTGGACTGCAT...CGGGCCCAGCCTCTCCTCACCTGGGGACTTCAGGGTTTGTCCCAGTGGATAATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CCA 90 bp CTCTTCAGCGCACCCAAGTGGTCAGGGTGGCAGCCAGTGTCGGTCTGGGCTTTCTTTTCTGGGCAGAACTaGTGGCCGTACATGTCGATG +
Preference number: 4 (lower is better)
Translates to: LFSAPKWSGWQPVSVWAFFSGQN*WPYMSM
Trigger: CATCGACATGTACGGCCACCAGTTCTGCCCAGAAAA...GAAAGCCCAGACCGACACTGGCTGCCACCCTGACCACTTGGGTGCGCTGAAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CCA 90 bp CCTGGTTCAGTTGGCCTCAGAGAGGCAGTGGCAGAATTATCCACTGGGACAAACATGGCCCCCATCCGCTaGCACAGTGGGGAGAAGCCA +
Preference number: 4 (lower is better)
Translates to: PGSVGLREAVAELSTGTNMAPIR*HSGEKP
Trigger: TGGCTTCTCCCCACTGTGCCAGCGGATGGGGGCCAT...GTTTGTCCCAGTGGATAATTCTGCCACTGCCTCTCTGAGGCCAACTGAACCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CCA 90 bp TTTGCAGCTCTTTCAGCAGCCTCTTCAGCGCACCCAAGTGGTCAGGGTGGCAGCGGTCGGCACACTGGATaGCCACATTCAGGATGTGGA +
Preference number: 4 (lower is better)
Translates to: FAALSAASSAHPSGQGGSGRHTG*PHSGCG
Trigger: TCCACATCCTGAATGTGGCCATCCAGTGTGCCGACC...GCTGCCACCCTGACCACTTGGGTGCGCTGAAGAGGCTGCTGAAAGAGCTGCAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CCA 90 bp TTTGCAGCTCTTTCAGCAGCCTCTTCAGCGCACCCAAGTGGTCAGGGTGGCAGCGATGCATCTTGTGGTTaGCACAGGGCACAGCGGTCA +
Preference number: 4 (lower is better)
Translates to: FAALSAASSAHPSGQGGSDASCG*HRAQRS
Trigger: TGACCGCTGTGCCCTGTGCCAACCACAAGATGCATC...GCTGCCACCCTGACCACTTGGGTGCGCTGAAGAGGCTGCTGAAAGAGCTGCAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CCA 90 bp TCTCATTCGGGTCCTGATGCTGCGGTGCCTGGCAGTGCTGGGAAAGTCTCTGTACTGCAAGCATCCACCTaGGGTCGTAGGGAGCTTTGG +
Preference number: 4 (lower is better)
Translates to: SHSGPDAAVPGSAGKVSVLQAST*GRRELW
Trigger: CCAAAGCTCCCTACGACCCCAGGTGGATGCTTGCAG...TACAGAGACTTTCCCAGCACTGCCAGGCACCGCAGCATCAGGACCCGAATGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CCA 90 bp TCTCATTCGGGTCCTGATGCTGCGGTGCCTGGCAGTGCTGGGAAAGTCTCTGTACCTCAGAATCCAAGTTaGCAGGGTCAGCGGGGACAG +
Preference number: 4 (lower is better)
Translates to: SHSGPDAAVPGSAGKVSVPQNPS*QGQRGQ
Trigger: CTGTCCCCGCTGACCCTGCCAACTTGGATTCTGAGG...TACAGAGACTTTCCCAGCACTGCCAGGCACCGCAGCATCAGGACCCGAATGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CCA 90 bp CAAGGAACTCGGTGTGCCTGGTTCAGTTGGCCTCAGAGAGGCAGTGGCAGAATTTCCTTGTCGGGAAGCTaGGCTTTCCCCAGCTGTCCC +
Preference number: 4 (lower is better)
Translates to: QGTRCAWFSWPQRGSGRISLSGS*AFPSCP
Trigger: GGGACAGCTGGGGAAAGCCCAGCTTCCCGACAAGGA...AATTCTGCCACTGCCTCTCTGAGGCCAACTGAACCAGGCACACCGAGTTCCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CCA 90 bp TCTCATTCGGGTCCTGATGCTGCGGTGCCTGGCAGTGCTGGGAAAGTCTCTGTATGCTGTTCCAGCCACTaGACCACCACCTGGTTGCTG +
Preference number: 4 (lower is better)
Translates to: SHSGPDAAVPGSAGKVSVCCSSH*TTTWLL
Trigger: CAGCAACCAGGTGGTGGTCCAGTGGCTGGAACAGCA...TACAGAGACTTTCCCAGCACTGCCAGGCACCGCAGCATCAGGACCCGAATGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CCA 90 bp CAGCAGCCTCTTCAGCGCACCCAAGTGGTCAGGGTGGCAGCCAGTGTCGGTCTGGTCCATGATGACCTCTaGATGTTCTTGGACCAGACT +
Preference number: 4 (lower is better)
Translates to: QQPLQRTQVVRVAASVGLVHDDL*MFLDQT
Trigger: AGTCTGGTCCAAGAACATCCAGAGGTCATCATGGAC...CAGACCGACACTGGCTGCCACCCTGACCACTTGGGTGCGCTGAAGAGGCTGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR TCA 90 bp CCTGGTTCAGTTGGCCTCAGAGAGGCAGTGGCAGAATTATCCACTGGGACAAACCCTTCAGCTTCATGCTaGAGAAGGGCTCGGGCAGGC +
Preference number: 4 (lower is better)
Translates to: PGSVGLREAVAELSTGTNPSASC*RRARAG
Trigger: GCCTGCCCGAGCCCTTCTTCAGCATGAAGCTGAAGG...GTTTGTCCCAGTGGATAATTCTGCCACTGCCTCTCTGAGGCCAACTGAACCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR TCA 90 bp TCAGGCAGTAGGGCACTCAGTACCCTGTGGGTGGCCAATCTGCAGGAGGCACGGACTGCTCCCTCAGGTTaGTCACACACTTGTCATAGT +
Preference number: 4 (lower is better)
Translates to: SGSRALSTLWVANLQEARTAPSG*SHTCHS
Trigger: ACTATGACAAGTGTGTGATCAACCTGAGGGAGCAGT...CCGTGCCTCCTGCAGATTGGCCACCCACAGGGTACTGAGTGCCCTACTGCCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR TCA 90 bp GCCTCAGAGAGGCAGTGGCAGAATTATCCACTGGGACAAACCCTGAAGTCCCCAGGGAAGAGGGCAGCATaGACTGGAACTCCACCACAC +
Preference number: 4 (lower is better)
Translates to: ASERQWQNYPLGQTLKSPGKRAA*TGTPPH
Trigger: GTGTGGTGGAGTTCCAGTTCATGCTGCCCTCTTCCC...TGGGGACTTCAGGGTTTGTCCCAGTGGATAATTCTGCCACTGCCTCTCTGAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR TCA 90 bp AATTATCCACTGGGACAAACCCTGAAGTCCCCAGGTGAGGAGAGGCTGGGCCCGGTGCTTGCAGTGCACTaGGTTCTGGGAACTGATCTG +
Preference number: 4 (lower is better)
Translates to: NYPLGQTLKSPGEERLGPVLAVH*VLGTDL
Trigger: CAGATCAGTTCCCAGAACTCAGTGCACTGCAAGCAC...CGGGCCCAGCCTCTCCTCACCTGGGGACTTCAGGGTTTGTCCCAGTGGATAATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR TCA 90 bp GCTGCGGTGCCTGGCAGTGCTGGGAAAGTCTCTGTAAGCGGATCCAGAGTGTTCGTGCTTGCAGTGCACTaGGTTCTGGGAACTGATCTG +
Preference number: 4 (lower is better)
Translates to: AAVPGSAGKVSVSGSRVFVLAVH*VLGTDL
Trigger: CAGATCAGTTCCCAGAACTCAGTGCACTGCAAGCAC...GAACACTCTGGATCCGCTTACAGAGACTTTCCCAGCACTGCCAGGCACCGCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR TCA 90 bp CTCTTCAGCGCACCCAAGTGGTCAGGGTGGCAGCCAGTGTCGGTCTGGGCTTTCCCCGCTTCAGATAATTaGTGTTTTCACGGATGGTGG +
Preference number: 4 (lower is better)
Translates to: LFSAPKWSGWQPVSVWAFPASDN*CFHGWW
Trigger: CCACCATCCGTGAAAACATCAATTATCTGAAGCGGG...GAAAGCCCAGACCGACACTGGCTGCCACCCTGACCACTTGGGTGCGCTGAAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR GCA 90 bp TCTTTCAGCAGCCTCTTCAGCGCACCCAAGTGGTCAGGGTGGCAGCCAGTGTCGCTGTCTCTTGATGTGTaGCTGCTTCCTGTCCTCTCT +
Preference number: 4 (lower is better)
Translates to: SFSSLFSAPKWSGWQPVSLSLDV*LLPVLS
Trigger: AGAGAGGACAGGAAGCAGGCACACATCAAGAGACAG...CGACACTGGCTGCCACCCTGACCACTTGGGTGCGCTGAAGAGGCTGCTGAAAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR GCA 90 bp CTCTTCAGCGCACCCAAGTGGTCAGGGTGGCAGCCAGTGTCGGTCTGGGCTTTCCATCTTGATGTACTCTaGGTTGGCCTTCAGATCCTC +
Preference number: 4 (lower is better)
Translates to: LFSAPKWSGWQPVSVWAFHLDVL*VGLQIL
Trigger: GAGGATCTGAAGGCCAACGCAGAGTACATCAAGATG...GAAAGCCCAGACCGACACTGGCTGCCACCCTGACCACTTGGGTGCGCTGAAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR GCA 90 bp CAAGGAACTCGGTGTGCCTGGTTCAGTTGGCCTCAGAGAGGCAGTGGCAGAATTGGGATTTGCAGTGTCTaGGCTACGATGGTGGAGGCG +
Preference number: 4 (lower is better)
Translates to: QGTRCAWFSWPQRGSGRIGICSV*ATMVEA
Trigger: CGCCTCCACCATCGTAGCGCAGACACTGCAAATCCC...AATTCTGCCACTGCCTCTCTGAGGCCAACTGAACCAGGCACACCGAGTTCCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR GCA 90 bp GGTCAGGGTGGCAGCCAGTGTCGGTCTGGGCTTTCCTCCACATCAAGAGGACCTACACGTTCTTGTTGCTaGGGAAGTTCAGCTCCTGCA +
Preference number: 4 (lower is better)
Translates to: GQGGSQCRSGLSSTSRGPTRSCC*GSSAPA
Trigger: TGCAGGAGCTGAACTTCCGCAGCAACAAGAACGTGT...AGGTCCTCTTGATGTGGAGGAAAGCCCAGACCGACACTGGCTGCCACCCTGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR GCA 90 bp GCTGCGGTGCCTGGCAGTGCTGGGAAAGTCTCTGTAAGCGGATCCAGAGTGTTCTCTGAACATCGCGTCTaGCACATTCAAGGCCCCACA +
Preference number: 4 (lower is better)
Translates to: AAVPGSAGKVSVSGSRVFSEHRV*HIQGPT
Trigger: TGTGGGGCCTTGAATGTGGCAGACGCGATGTTCAGA...GAACACTCTGGATCCGCTTACAGAGACTTTCCCAGCACTGCCAGGCACCGCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR GCA 90 bp TCTCATTCGGGTCCTGATGCTGCGGTGCCTGGCAGTGCTGGGAAAGTCTCTGTAAGGATGGTGGCTATCTaGTGGCTGGGGAACTGGCAT +
Preference number: 4 (lower is better)
Translates to: SHSGPDAAVPGSAGKVSVRMVAI*WLGNWH
Trigger: ATGCCAGTTCCCCAGCCAGCAGATAGCCACCATCCT...TACAGAGACTTTCCCAGCACTGCCAGGCACCGCAGCATCAGGACCCGAATGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR GCA 90 bp TCTCATTCGGGTCCTGATGCTGCGGTGCCTGGCAGTGCTGGGAAAGTCTCTGTAAAGAGTTCTGTGCTGTaGCTCAGCAGGTCGGGGTTG +
Preference number: 4 (lower is better)
Translates to: SHSGPDAAVPGSAGKVSVKSSVL*LSRSGL
Trigger: CAACCCCGACCTGCTGAGGCACAGCACAGAACTCTT...TACAGAGACTTTCCCAGCACTGCCAGGCACCGCAGCATCAGGACCCGAATGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR GCA 90 bp TCTCATTCGGGTCCTGATGCTGCGGTGCCTGGCAGTGCTGGGAAAGTCTCTGTACTTCTCCTGCAATCATaGCCGAGCCCCTCAGGTTCT +
Preference number: 4 (lower is better)
Translates to: SHSGPDAAVPGSAGKVSVLLLQS*PSPSGS
Trigger: AGAACCTGAGGGGCTCGGGCATGATTGCAGGAGAAG...TACAGAGACTTTCCCAGCACTGCCAGGCACCGCAGCATCAGGACCCGAATGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR GCA 90 bp TCTTTCAGCAGCCTCTTCAGCGCACCCAAGTGGTCAGGGTGGCAGCCAGTGTCGTCGAAGAATCCACTCTaGCAGGTCCCCTTCAGAGTT +
Preference number: 4 (lower is better)
Translates to: SFSSLFSAPKWSGWQPVSSKNPL*QVPFRV
Trigger: AACTCTGAAGGGGACCTGGCAGAGTGGATTCTTCGA...CGACACTGGCTGCCACCCTGACCACTTGGGTGCGCTGAAGAGGCTGCTGAAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR GCA 90 bp GCCTCAGAGAGGCAGTGGCAGAATTATCCACTGGGACAAACCCTGAAGTCCCCAGTCTGCGAACTGCACTaGCACCTGGTGGTAGATGGG +
Preference number: 4 (lower is better)
Translates to: ASERQWQNYPLGQTLKSPVCELH*HLVVDG
Trigger: CCCATCTACCACCAGGTGGCAGTGCAGTTCGCAGAC...TGGGGACTTCAGGGTTTGTCCCAGTGGATAATTCTGCCACTGCCTCTCTGAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR GCA 90 bp GTGTGCCTGGTTCAGTTGGCCTCAGAGAGGCAGTGGCAGAATTATCCACTGGGAGTCTGCGAACTGCACTaGCACCTGGTGGTAGATGGG +
Preference number: 4 (lower is better)
Translates to: VCLVQLASERQWQNYPLGVCELH*HLVVDG
Trigger: CCCATCTACCACCAGGTGGCAGTGCAGTTCGCAGAC...TCCCAGTGGATAATTCTGCCACTGCCTCTCTGAGGCCAACTGAACCAGGCACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CCA 90 bp GATCAGACACCGGATCCCCACCTCAGGCAAAAACCACAAGGAACTCGGTGTGCCGTCATTGGAAGACAGTaGGTTCCTCGGAGGCCTCTG +
Preference number: 4 (lower is better)
Translates to: DQTPDPHLRQKPQGTRCAVIGRQ*VPRRPL
Trigger: CAGAGGCCTCCGAGGAACCCACTGTCTTCCAATGAC...GGCACACCGAGTTCCTTGTGGTTTTTGCCTGAGGTGGGGATCCGGTGTCTGATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CCA 90 bp TCTCATTCGGGTCCTGATGCTGCGGTGCCTGGCAGTGCTGGGAAAGTCTCTGTAAGGGCCAGGTGTCATTaGAAGACAGTGGGTTCCTCG +
Preference number: 4 (lower is better)
Translates to: SHSGPDAAVPGSAGKVSVRARCH*KTVGSS
Trigger: CGAGGAACCCACTGTCTTCCAATGACACCTGGCCCT...TACAGAGACTTTCCCAGCACTGCCAGGCACCGCAGCATCAGGACCCGAATGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CCA 90 bp GAGCCTGGGAACCGAGGCAGTAACTCTCCTCCAGCCATGCTGAATGCTAGGTGTAGGGCCAGGTGTCATTaGAAGACAGTGGGTTCCTCG +
Preference number: 4 (lower is better)
Translates to: EPGNRGSNSPPAMLNARCRARCH*KTVGSS
Trigger: CGAGGAACCCACTGTCTTCCAATGACACCTGGCCCT...ACACCTAGCATTCAGCATGGCTGGAGGAGAGTTACTGCCTCGGTTCCCAGGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CCA 90 bp AGTTTATTTTGCAGCTCTTTCAGCAGCCTCTTCAGCGCACCCAAGTGGTCAGGGGCTCGGGGGCCTGGCTaGGAAGGACAACCCATTAGC +
Preference number: 4 (lower is better)
Translates to: SLFCSSFSSLFSAPKWSGARGPG*EGQPIS
Trigger: GCTAATGGGTTGTCCTTCCCAGCCAGGCCCCCGAGC...CCCTGACCACTTGGGTGCGCTGAAGAGGCTGCTGAAAGAGCTGCAAAATAAACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CCA 90 bp GAGCCTGGGAACCGAGGCAGTAACTCTCCTCCAGCCATGCTGAATGCTAGGTGTGCAGCTCTGGAAGTTTaGGGTTTTCCGAAGCGTGGC +
Preference number: 4 (lower is better)
Translates to: EPGNRGSNSPPAMLNARCAALEV*GFPKRG
Trigger: GCCACGCTTCGGAAAACCCCAAACTTCCAGAGCTGC...ACACCTAGCATTCAGCATGGCTGGAGGAGAGTTACTGCCTCGGTTCCCAGGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CCA 90 bp TCTCATTCGGGTCCTGATGCTGCGGTGCCTGGCAGTGCTGGGAAAGTCTCTGTATCTGCGCTACGATGGTaGAGGCGATCTTGTCTCCCA +
Preference number: 4 (lower is better)
Translates to: SHSGPDAAVPGSAGKVSVSALRW*RRSCLP
Trigger: TGGGAGACAAGATCGCCTCCACCATCGTAGCGCAGA...TACAGAGACTTTCCCAGCACTGCCAGGCACCGCAGCATCAGGACCCGAATGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CCA 90 bp GATCAGACACCGGATCCCCACCTCAGGCAAAAACCACAAGGAACTCGGTGTGCCGTGTCTGCGCTACGATaGTGGAGGCGATCTTGTCTC +
Preference number: 4 (lower is better)
Translates to: DQTPDPHLRQKPQGTRCAVSALR*WRRSCL
Trigger: GAGACAAGATCGCCTCCACCATCGTAGCGCAGACAC...GGCACACCGAGTTCCTTGTGGTTTTTGCCTGAGGTGGGGATCCGGTGTCTGATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CCA 90 bp AACGTGGTAGAACAAGTGTCTTGTGATCAGACACCGGATCCCCACCTCAGGCAACGTGGCCTCGGGCAATaGGAGGGCTCAAGGGGGTTT +
Preference number: 4 (lower is better)
Translates to: NVVEQVSCDQTPDPHLRQRGLGQ*EGSRGF
Trigger: AAACCCCCTTGAGCCCTCCCATTGCCCGAGGCCACG...TTGCCTGAGGTGGGGATCCGGTGTCTGATCACAAGACACTTGTTCTACCACGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CCA 90 bp CTCTTCAGCGCACCCAAGTGGTCAGGGTGGCAGCCAGTGTCGGTCTGGGCTTTCCTTAAAGCCCTCATCTaGGTTTTCGCTGGTGATCCT +
Preference number: 4 (lower is better)
Translates to: LFSAPKWSGWQPVSVWAFLKALI*VFAGDP
Trigger: AGGATCACCAGCGAAAACCCAGATGAGGGCTTTAAG...GAAAGCCCAGACCGACACTGGCTGCCACCCTGACCACTTGGGTGCGCTGAAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CCA 90 bp CTCTTCAGCGCACCCAAGTGGTCAGGGTGGCAGCCAGTGTCGGTCTGGGCTTTCGCTCATCTATCAGCATaGTCACCAGCTGGTTCTTCT +
Preference number: 4 (lower is better)
Translates to: LFSAPKWSGWQPVSVWAFAHLSA*SPAGSS
Trigger: AGAAGAACCAGCTGGTGACCATGCTGATAGATGAGC...GAAAGCCCAGACCGACACTGGCTGCCACCCTGACCACTTGGGTGCGCTGAAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CCA 90 bp AACGTGGTAGAACAAGTGTCTTGTGATCAGACACCGGATCCCCACCTCAGGCAAGCCTCGTCCTCCATGTaGTCGGCACACTGGATGGCC +
Preference number: 4 (lower is better)
Translates to: NVVEQVSCDQTPDPHLRQASSSM*SAHWMA
Trigger: GGCCATCCAGTGTGCCGACCACATGGAGGACGAGGC...TTGCCTGAGGTGGGGATCCGGTGTCTGATCACAAGACACTTGTTCTACCACGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CCA 90 bp GCTGCGGTGCCTGGCAGTGCTGGGAAAGTCTCTGTAAGCGGATCCAGAGTGTTCTGGAATCGCTTAGCCTaGAGCAGGTCCTTGGTGACA +
Preference number: 4 (lower is better)
Translates to: AAVPGSAGKVSVSGSRVFWNRLA*SRSLVT
Trigger: TGTCACCAAGGACCTGCTCCAGGCTAAGCGATTCCA...GAACACTCTGGATCCGCTTACAGAGACTTTCCCAGCACTGCCAGGCACCGCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CCA 90 bp CAGCAGCCTCTTCAGCGCACCCAAGTGGTCAGGGTGGCAGCCAGTGTCGGTCTGTCCACCCAAGCCACTTaGAATATCTGTTTGATCTCC +
Preference number: 4 (lower is better)
Translates to: QQPLQRTQVVRVAASVGLSTQAT*NICLIS
Trigger: GGAGATCAAACAGATATTCCAAGTGGCTTGGGTGGA...CAGACCGACACTGGCTGCCACCCTGACCACTTGGGTGCGCTGAAGAGGCTGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CCA 90 bp CAAGGAACTCGGTGTGCCTGGTTCAGTTGGCCTCAGAGAGGCAGTGGCAGAATTCCTCAGAATCCAAGTTaGCAGGGTCAGCGGGGACAG +
Preference number: 4 (lower is better)
Translates to: QGTRCAWFSWPQRGSGRIPQNPS*QGQRGQ
Trigger: CTGTCCCCGCTGACCCTGCCAACTTGGATTCTGAGG...AATTCTGCCACTGCCTCTCTGAGGCCAACTGAACCAGGCACACCGAGTTCCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CCA 90 bp TCTCATTCGGGTCCTGATGCTGCGGTGCCTGGCAGTGCTGGGAAAGTCTCTGTATGTTTTCACGGATGGTaGAGCGCAAGCCGTCCTTGG +
Preference number: 4 (lower is better)
Translates to: SHSGPDAAVPGSAGKVSVCFHGW*SASRPW
Trigger: CCAAGGACGGCTTGCGCTCCACCATCCGTGAAAACA...TACAGAGACTTTCCCAGCACTGCCAGGCACCGCAGCATCAGGACCCGAATGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CCA 90 bp CTCTTCAGCGCACCCAAGTGGTCAGGGTGGCAGCCAGTGTCGGTCTGGGCTTTCACCTCTGGATGTTCTTaGACCAGACTTTGGATGGTC +
Preference number: 4 (lower is better)
Translates to: LFSAPKWSGWQPVSVWAFTSGCS*TRLWMV
Trigger: GACCATCCAAAGTCTGGTCCAAGAACATCCAGAGGT...GAAAGCCCAGACCGACACTGGCTGCCACCCTGACCACTTGGGTGCGCTGAAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CCA 90 bp TCAGGCAGTAGGGCACTCAGTACCCTGTGGGTGGCCAATCTGCAGGAGGCACGGGTCCATGATGACCTCTaGATGTTCTTGGACCAGACT +
Preference number: 4 (lower is better)
Translates to: SGSRALSTLWVANLQEARVHDDL*MFLDQT
Trigger: AGTCTGGTCCAAGAACATCCAGAGGTCATCATGGAC...CCGTGCCTCCTGCAGATTGGCCACCCACAGGGTACTGAGTGCCCTACTGCCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR TCA 90 bp CAAGGAACTCGGTGTGCCTGGTTCAGTTGGCCTCAGAGAGGCAGTGGCAGAATTGGGACAGGGACGTACTaGTCGGCCATCTTGATGTAC +
Preference number: 4 (lower is better)
Translates to: QGTRCAWFSWPQRGSGRIGTGTY*SAILMY
Trigger: GTACATCAAGATGGCCGATCAGTACGTCCCTGTCCC...AATTCTGCCACTGCCTCTCTGAGGCCAACTGAACCAGGCACACCGAGTTCCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR TCA 90 bp GTGTGCCTGGTTCAGTTGGCCTCAGAGAGGCAGTGGCAGAATTATCCACTGGGAGGGACAGGGACGTACTaGTCGGCCATCTTGATGTAC +
Preference number: 4 (lower is better)
Translates to: VCLVQLASERQWQNYPLGGTGTY*SAILMY
Trigger: GTACATCAAGATGGCCGATCAGTACGTCCCTGTCCC...TCCCAGTGGATAATTCTGCCACTGCCTCTCTGAGGCCAACTGAACCAGGCACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR TCA 90 bp AACGTGGTAGAACAAGTGTCTTGTGATCAGACACCGGATCCCCACCTCAGGCAACCGGAGCCTCCTCAATaGTCTTCTGGTGCCGCCTCT +
Preference number: 4 (lower is better)
Translates to: NVVEQVSCDQTPDPHLRQPEPPQ*SSGAAS
Trigger: AGAGGCGGCACCAGAAGATCATTGAGGAGGCTCCGG...TTGCCTGAGGTGGGGATCCGGTGTCTGATCACAAGACACTTGTTCTACCACGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR TCA 90 bp TCTTTCAGCAGCCTCTTCAGCGCACCCAAGTGGTCAGGGTGGCAGCCAGTGTCGGGCAGTAGCCACTCATaGCATTGGTCAGATTTTCCA +
Preference number: 4 (lower is better)
Translates to: SFSSLFSAPKWSGWQPVSGSSHS*HWSDFP
Trigger: TGGAAAATCTGACCAATGTCATGAGTGGCTACTGCC...CGACACTGGCTGCCACCCTGACCACTTGGGTGCGCTGAAGAGGCTGCTGAAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR TCA 90 bp AACGTGGTAGAACAAGTGTCTTGTGATCAGACACCGGATCCCCACCTCAGGCAACCTTCAGCTTCATGCTaGAGAAGGGCTCGGGCAGGC +
Preference number: 4 (lower is better)
Translates to: NVVEQVSCDQTPDPHLRQPSASC*RRARAG
Trigger: GCCTGCCCGAGCCCTTCTTCAGCATGAAGCTGAAGG...TTGCCTGAGGTGGGGATCCGGTGTCTGATCACAAGACACTTGTTCTACCACGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR TCA 90 bp GCTGCGGTGCCTGGCAGTGCTGGGAAAGTCTCTGTAAGCGGATCCAGAGTGTTCCTTGGAATATCTGTTTaGTCTCCTCAGCCAGGCCCA +
Preference number: 4 (lower is better)
Translates to: AAVPGSAGKVSVSGSRVFLGISV*SPQPGP
Trigger: TGGGCCTGGCTGAGGAGATCAAACAGATATTCCAAG...GAACACTCTGGATCCGCTTACAGAGACTTTCCCAGCACTGCCAGGCACCGCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR TCA 90 bp AGTTTATTTTGCAGCTCTTTCAGCAGCCTCTTCAGCGCACCCAAGTGGTCAGGGGTGGTAGACAGCAGCTaGGCCACCTGTATCCGCTCG +
Preference number: 4 (lower is better)
Translates to: SLFCSSFSSLFSAPKWSGVVDSS*ATCIRS
Trigger: CGAGCGGATACAGGTGGCTCAGCTGCTGTCTACCAC...CCCTGACCACTTGGGTGCGCTGAAGAGGCTGCTGAAAGAGCTGCAAAATAAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR GCA 90 bp GCCTGGTTCAGTTGGCCTCAGAGAGGCAGTGGCAGAATTATCCACTGGGACAAAGGGATTTGCAGTGTCTaGGCTACGATGGTGGAGGCG +
Preference number: 4 (lower is better)
Translates to: AWFSWPQRGSGRIIHWDKGICSV*ATMVEA
Trigger: CGCCTCCACCATCGTAGCGCAGACACTGCAAATCCC...TTTGTCCCAGTGGATAATTCTGCCACTGCCTCTCTGAGGCCAACTGAACCAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR GCA 90 bp GTGTGCCTGGTTCAGTTGGCCTCAGAGAGGCAGTGGCAGAATTATCCACTGGGACATCGGGAAGTCCTCTaGACTCTCAGCCTTGCGGAT +
Preference number: 4 (lower is better)
Translates to: VCLVQLASERQWQNYPLGHREVL*TLSLAD
Trigger: ATCCGCAAGGCTGAGAGTGCAGAGGACTTCCCGATG...TCCCAGTGGATAATTCTGCCACTGCCTCTCTGAGGCCAACTGAACCAGGCACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR GCA 90 bp GAGCCTGGGAACCGAGGCAGTAACTCTCCTCCAGCCATGCTGAATGCTAGGTGTCCCCTTTCCAGGGAGTaGAAGAATTCCGTCATGCAG +
Preference number: 4 (lower is better)
Translates to: EPGNRGSNSPPAMLNARCPLSRE*KNSVMQ
Trigger: CTGCATGACGGAATTCTTGCACTCCCTGGAAAGGGG...ACACCTAGCATTCAGCATGGCTGGAGGAGAGTTACTGCCTCGGTTCCCAGGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR GCA 90 bp AACGTGGTAGAACAAGTGTCTTGTGATCAGACACCGGATCCCCACCTCAGGCAAACCCGGCCGCTCTCCTaGACGTTCAGGGTCATGATC +
Preference number: 4 (lower is better)
Translates to: NVVEQVSCDQTPDPHLRQTRPLS*TFRVMI
Trigger: GATCATGACCCTGAACGTGCAGGAGAGCGGCCGGGT...TTGCCTGAGGTGGGGATCCGGTGTCTGATCACAAGACACTTGTTCTACCACGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR GCA 90 bp AATTATCCACTGGGACAAACCCTGAAGTCCCCAGGTGAGGAGAGGCTGGGCCCGTATCTCTGGACCAGCTaGACGATGCTCTGTGTGTTC +
Preference number: 4 (lower is better)
Translates to: NYPLGQTLKSPGEERLGPYLWTS*TMLCVF
Trigger: GAACACACAGAGCATCGTGCAGCTGGTCCAGAGATA...CGGGCCCAGCCTCTCCTCACCTGGGGACTTCAGGGTTTGTCCCAGTGGATAATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR GCA 90 bp CAAGGAACTCGGTGTGCCTGGTTCAGTTGGCCTCAGAGAGGCAGTGGCAGAATTTCGCTTCTGCTCAGCTaGGTGAGCTCACAGAGGATG +
Preference number: 4 (lower is better)
Translates to: QGTRCAWFSWPQRGSGRISLLLS*VSSQRM
Trigger: CATCCTCTGTGAGCTCACGCAGCTGAGCAGAAGCGA...AATTCTGCCACTGCCTCTCTGAGGCCAACTGAACCAGGCACACCGAGTTCCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR GCA 90 bp AACGTGGTAGAACAAGTGTCTTGTGATCAGACACCGGATCCCCACCTCAGGCAAACTCCACCACACAGGTaGCATCTGGGAGCTCCCGGT +
Preference number: 4 (lower is better)
Translates to: NVVEQVSCDQTPDPHLRQTPPHR*HLGAPG
Trigger: ACCGGGAGCTCCCAGATGGCACCTGTGTGGTGGAGT...TTGCCTGAGGTGGGGATCCGGTGTCTGATCACAAGACACTTGTTCTACCACGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR GCA 90 bp GCCTCAGAGAGGCAGTGGCAGAATTATCCACTGGGACAAACCCTGAAGTCCCCACTTCTCCTGCAATCATaGCCGAGCCCCTCAGGTTCT +
Preference number: 4 (lower is better)
Translates to: ASERQWQNYPLGQTLKSPLLLQS*PSPSGS
Trigger: AGAACCTGAGGGGCTCGGGCATGATTGCAGGAGAAG...TGGGGACTTCAGGGTTTGTCCCAGTGGATAATTCTGCCACTGCCTCTCTGAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR GCA 90 bp GCTGCGGTGCCTGGCAGTGCTGGGAAAGTCTCTGTAAGCGGATCCAGAGTGTTCTCCAGTAGAAGAAGGTaGGGGCAGTCTTCCATTCCA +
Preference number: 4 (lower is better)
Translates to: AAVPGSAGKVSVSGSRVFSSRRR*GQSSIP
Trigger: TGGAATGGAAGACTGCCCGCACCTTCTTCTACTGGA...GAACACTCTGGATCCGCTTACAGAGACTTTCCCAGCACTGCCAGGCACCGCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CCA 90 bp CCTGGTTCAGTTGGCCTCAGAGAGGCAGTGGCAGAATTATCCACTGGGACAAACCCCACATGGCCTCACTaGGGGGACCTAGGAAAGCAA +
Preference number: 4 (lower is better)
Translates to: PGSVGLREAVAELSTGTNPTWPH*GDLGKQ
Trigger: TTGCTTTCCTAGGTCCCCCCAGTGAGGCCATGTGGG...GTTTGTCCCAGTGGATAATTCTGCCACTGCCTCTCTGAGGCCAACTGAACCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CCA 90 bp GTGTGCCTGGTTCAGTTGGCCTCAGAGAGGCAGTGGCAGAATTATCCACTGGGAGTGTCTGCGCTACGATaGTGGAGGCGATCTTGTCTC +
Preference number: 4 (lower is better)
Translates to: VCLVQLASERQWQNYPLGVSALR*WRRSCL
Trigger: GAGACAAGATCGCCTCCACCATCGTAGCGCAGACAC...TCCCAGTGGATAATTCTGCCACTGCCTCTCTGAGGCCAACTGAACCAGGCACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CCA 90 bp GGTCAGGGTGGCAGCCAGTGTCGGTCTGGGCTTTCCTCCACATCAAGAGGACCTGGGATCTCAGGACAGTaGGGTCGTTTTCCTTTTCAA +
Preference number: 4 (lower is better)
Translates to: GQGGSQCRSGLSSTSRGPGISGQ*GRFPFQ
Trigger: TTGAAAAGGAAAACGACCCCACTGTCCTGAGATCCC...AGGTCCTCTTGATGTGGAGGAAAGCCCAGACCGACACTGGCTGCCACCCTGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CCA 90 bp CAAGGAACTCGGTGTGCCTGGTTCAGTTGGCCTCAGAGAGGCAGTGGCAGAATTATGTTACTGGCGTACTaGGCCATCACCCTGCGGACT +
Preference number: 4 (lower is better)
Translates to: QGTRCAWFSWPQRGSGRIMLLAY*AITLRT
Trigger: AGTCCGCAGGGTGATGGCCCAGTACGCCAGTAACAT...AATTCTGCCACTGCCTCTCTGAGGCCAACTGAACCAGGCACACCGAGTTCCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CCA 90 bp TTTGCAGCTCTTTCAGCAGCCTCTTCAGCGCACCCAAGTGGTCAGGGTGGCAGCTTCTTCTTGGCCACCTaGGAGTGTGAGAAGATGCAG +
Preference number: 4 (lower is better)
Translates to: FAALSAASSAHPSGQGGSFFLAT*ECEKMQ
Trigger: CTGCATCTTCTCACACTCCCAGGTGGCCAAGAAGAA...GCTGCCACCCTGACCACTTGGGTGCGCTGAAGAGGCTGCTGAAAGAGCTGCAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CCA 90 bp GTGTGCCTGGTTCAGTTGGCCTCAGAGAGGCAGTGGCAGAATTATCCACTGGGAAGCATGGTCACCAGCTaGTTCTTCTTGGCCACCTGG +
Preference number: 4 (lower is better)
Translates to: VCLVQLASERQWQNYPLGSMVTS*FFLATW
Trigger: CCAGGTGGCCAAGAAGAACCAGCTGGTGACCATGCT...TCCCAGTGGATAATTCTGCCACTGCCTCTCTGAGGCCAACTGAACCAGGCACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CCA 90 bp GAGCCTGGGAACCGAGGCAGTAACTCTCCTCCAGCCATGCTGAATGCTAGGTGTCATTCAGGATGTGGATaGGTTCCTCTCGGAGGCTCT +
Preference number: 4 (lower is better)
Translates to: EPGNRGSNSPPAMLNARCHSGCG*VPLGGS
Trigger: AGAGCCTCCGAGAGGAACCCATCCACATCCTGAATG...ACACCTAGCATTCAGCATGGCTGGAGGAGAGTTACTGCCTCGGTTCCCAGGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CCA 90 bp CAAGGAACTCGGTGTGCCTGGTTCAGTTGGCCTCAGAGAGGCAGTGGCAGAATTGCCACATTCAGGATGTaGATGGGTTCCTCTCGGAGG +
Preference number: 4 (lower is better)
Translates to: QGTRCAWFSWPQRGSGRIATFRM*MGSSRR
Trigger: CCTCCGAGAGGAACCCATCCACATCCTGAATGTGGC...AATTCTGCCACTGCCTCTCTGAGGCCAACTGAACCAGGCACACCGAGTTCCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CCA 90 bp CAAGGAACTCGGTGTGCCTGGTTCAGTTGGCCTCAGAGAGGCAGTGGCAGAATTGGTCGGCACACTGGATaGCCACATTCAGGATGTGGA +
Preference number: 4 (lower is better)
Translates to: QGTRCAWFSWPQRGSGRIGRHTG*PHSGCG
Trigger: TCCACATCCTGAATGTGGCCATCCAGTGTGCCGACC...AATTCTGCCACTGCCTCTCTGAGGCCAACTGAACCAGGCACACCGAGTTCCTTG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CCA 90 bp AACGTGGTAGAACAAGTGTCTTGTGATCAGACACCGGATCCCCACCTCAGGCAAAAAGGCACGGAAGACTaGCACCAGCGCCTCGTCCTC +
Preference number: 4 (lower is better)
Translates to: NVVEQVSCDQTPDPHLRQKGTED*HQRLVL
Trigger: GAGGACGAGGCGCTGGTGCCAGTCTTCCGTGCCTTT...TTGCCTGAGGTGGGGATCCGGTGTCTGATCACAAGACACTTGTTCTACCACGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CCA 90 bp GATCAGACACCGGATCCCCACCTCAGGCAAAAACCACAAGGAACTCGGTGTGCCCGGATAAAGAACCTGTaGTCGGTCACCTCCAACCCT +
Preference number: 4 (lower is better)
Translates to: DQTPDPHLRQKPQGTRCARIKNL*SVTSNP
Trigger: AGGGTTGGAGGTGACCGACCACAGGTTCTTTATCCG...GGCACACCGAGTTCCTTGTGGTTTTTGCCTGAGGTGGGGATCCGGTGTCTGATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CCA 90 bp TCTCATTCGGGTCCTGATGCTGCGGTGCCTGGCAGTGCTGGGAAAGTCTCTGTAAGAGGCGGATGGGGATaGCACTATCTGAGGTTGTCT +
Preference number: 4 (lower is better)
Translates to: SHSGPDAAVPGSAGKVSVRGGWG*HYLRLS
Trigger: AGACAACCTCAGATAGTGCCATCCCCATCCGCCTCT...TACAGAGACTTTCCCAGCACTGCCAGGCACCGCAGCATCAGGACCCGAATGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CCA 90 bp TCAGGCAGTAGGGCACTCAGTACCCTGTGGGTGGCCAATCTGCAGGAGGCACGGTCCACCCAAGCCACTTaGAATATCTGTTTGATCTCC +
Preference number: 4 (lower is better)
Translates to: SGSRALSTLWVANLQEARSTQAT*NICLIS
Trigger: GGAGATCAAACAGATATTCCAAGTGGCTTGGGTGGA...CCGTGCCTCCTGCAGATTGGCCACCCACAGGGTACTGAGTGCCCTACTGCCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CCA 90 bp AACGTGGTAGAACAAGTGTCTTGTGATCAGACACCGGATCCCCACCTCAGGCAACCCGTCACCACAGTCTaGGCCCAGGGTGCCATGATT +
Preference number: 4 (lower is better)
Translates to: NVVEQVSCDQTPDPHLRQPVTTV*AQGAMI
Trigger: AATCATGGCACCCTGGGCCCAGACTGTGGTGACGGG...TTGCCTGAGGTGGGGATCCGGTGTCTGATCACAAGACACTTGTTCTACCACGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR TCA 90 bp CTTTCCTCCACATCAAGAGGACCTTGCCCAGAAGAACCCTTTATCCCCCAAGAACAGCAGCGGCCACGCTaGAGTAACCCCACACGTTCT +
Preference number: 4 (lower is better)
Translates to: LSSTSRGPCPEEPFIPQEQQRPR*SNPTRS
Trigger: AGAACGTGTGGGGTTACTTCAGCGTGGCCGCTGCTG...TTCTTGGGGGATAAAGGGTTCTTCTGGGCAAGGTCCTCTTGATGTGGAGGAAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR TCA 90 bp TTTGCAGCTCTTTCAGCAGCCTCTTCAGCGCACCCAAGTGGTCAGGGTGGCAGCGGCAGTAGCCACTCATaGCATTGGTCAGATTTTCCA +
Preference number: 4 (lower is better)
Translates to: FAALSAASSAHPSGQGGSGSSHS*HWSDFP
Trigger: TGGAAAATCTGACCAATGTCATGAGTGGCTACTGCC...GCTGCCACCCTGACCACTTGGGTGCGCTGAAGAGGCTGCTGAAAGAGCTGCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR TCA 90 bp AACGTGGTAGAACAAGTGTCTTGTGATCAGACACCGGATCCCCACCTCAGGCAAGGGAAGAGGGCAGCATaGACTGGAACTCCACCACAC +
Preference number: 4 (lower is better)
Translates to: NVVEQVSCDQTPDPHLRQGKRAA*TGTPPH
Trigger: GTGTGGTGGAGTTCCAGTTCATGCTGCCCTCTTCCC...TTGCCTGAGGTGGGGATCCGGTGTCTGATCACAAGACACTTGTTCTACCACGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR TCA 90 bp GTGTGCCTGGTTCAGTTGGCCTCAGAGAGGCAGTGGCAGAATTATCCACTGGGAAGAAGCCACTGTCCATaGAGAGTTCTGTGCTGTGCC +
Preference number: 4 (lower is better)
Translates to: VCLVQLASERQWQNYPLGRSHCP*RVLCCA
Trigger: GGCACAGCACAGAACTCTTCATGGACAGTGGCTTCT...TCCCAGTGGATAATTCTGCCACTGCCTCTCTGAGGCCAACTGAACCAGGCACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR TCA 90 bp GGTCAGGGTGGCAGCCAGTGTCGGTCTGGGCTTTCCTCCACATCAAGAGGACCTGTCCTTCGGTATAAATaGCAGCCATTCCAGAATGGT +
Preference number: 4 (lower is better)
Translates to: GQGGSQCRSGLSSTSRGPVLRYK*QPFQNG
Trigger: ACCATTCTGGAATGGCTGTCATTTATACCGAAGGAC...AGGTCCTCTTGATGTGGAGGAAAGCCCAGACCGACACTGGCTGCCACCCTGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR GCA 90 bp GTGTGCCTGGTTCAGTTGGCCTCAGAGAGGCAGTGGCAGAATTATCCACTGGGACCCACACGTTCTTGTTaGTGCGGAAGTTCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: VCLVQLASERQWQNYPLGPTRSC*CGSSAP
Trigger: AGGAGCTGAACTTCCGCAGCAACAAGAACGTGTGGG...TCCCAGTGGATAATTCTGCCACTGCCTCTCTGAGGCCAACTGAACCAGGCACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR GCA 90 bp GCCTGGTTCAGTTGGCCTCAGAGAGGCAGTGGCAGAATTATCCACTGGGACAAAAGGATGGTGGCTATCTaGTGGCTGGGGAACTGGCAT +
Preference number: 4 (lower is better)
Translates to: AWFSWPQRGSGRIIHWDKRMVAI*WLGNWH
Trigger: ATGCCAGTTCCCCAGCCAGCAGATAGCCACCATCCT...TTTGTCCCAGTGGATAATTCTGCCACTGCCTCTCTGAGGCCAACTGAACCAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR GCA 90 bp CCTGGTTCAGTTGGCCTCAGAGAGGCAGTGGCAGAATTATCCACTGGGACAAACTCGCTTCTGCTCAGCTaGGTGAGCTCACAGAGGATG +
Preference number: 4 (lower is better)
Translates to: PGSVGLREAVAELSTGTNSLLLS*VSSQRM
Trigger: CATCCTCTGTGAGCTCACGCAGCTGAGCAGAAGCGA...GTTTGTCCCAGTGGATAATTCTGCCACTGCCTCTCTGAGGCCAACTGAACCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR GCA 90 bp CTTTCCTCCACATCAAGAGGACCTTGCCCAGAAGAACCCTTTATCCCCCAAGAAACTCCACCACACAGGTaGCATCTGGGAGCTCCCGGT +
Preference number: 4 (lower is better)
Translates to: LSSTSRGPCPEEPFIPQETPPHR*HLGAPG
Trigger: ACCGGGAGCTCCCAGATGGCACCTGTGTGGTGGAGT...TTCTTGGGGGATAAAGGGTTCTTCTGGGCAAGGTCCTCTTGATGTGGAGGAAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR GCA 90 bp GATCAGACACCGGATCCCCACCTCAGGCAAAAACCACAAGGAACTCGGTGTGCCTCGATGTGCTTGCAGTaGACTGAGTTCTGGGAACTG +
Preference number: 4 (lower is better)
Translates to: DQTPDPHLRQKPQGTRCASMCLQ*TEFWEL
Trigger: CAGTTCCCAGAACTCAGTGCACTGCAAGCACATCGA...GGCACACCGAGTTCCTTGTGGTTTTTGCCTGAGGTGGGGATCCGGTGTCTGATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CCA 90 bp CCTGGTTCAGTTGGCCTCAGAGAGGCAGTGGCAGAATTATCCACTGGGACAAACGTCATTGGAAGACAGTaGGTTCCTCGGAGGCCTCTG +
Preference number: 4 (lower is better)
Translates to: PGSVGLREAVAELSTGTNVIGRQ*VPRRPL
Trigger: CAGAGGCCTCCGAGGAACCCACTGTCTTCCAATGAC...GTTTGTCCCAGTGGATAATTCTGCCACTGCCTCTCTGAGGCCAACTGAACCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CCA 90 bp CCTGGTTCAGTTGGCCTCAGAGAGGCAGTGGCAGAATTATCCACTGGGACAAACCCTCTCTTCACCAGATaGAGTCCAGACATGCTGGGC +
Preference number: 4 (lower is better)
Translates to: PGSVGLREAVAELSTGTNPLFTR*SPDMLG
Trigger: GCCCAGCATGTCTGGACTCCATCTGGTGAAGAGAGG...GTTTGTCCCAGTGGATAATTCTGCCACTGCCTCTCTGAGGCCAACTGAACCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CCA 90 bp TCTTTCAGCAGCCTCTTCAGCGCACCCAAGTGGTCAGGGTGGCAGCCAGTGTCGTTTACACAGCAGCTCTaGAAGTTTGGGGTTTTCCGA +
Preference number: 4 (lower is better)
Translates to: SFSSLFSAPKWSGWQPVSFTQQL*KFGVFR
Trigger: TCGGAAAACCCCAAACTTCCAGAGCTGCTGTGTAAA...CGACACTGGCTGCCACCCTGACCACTTGGGTGCGCTGAAGAGGCTGCTGAAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CCA 90 bp GATCAGACACCGGATCCCCACCTCAGGCAAAAACCACAAGGAACTCGGTGTGCCGTCATCATGAGCTTCTaGACCCAGTCCTTCAGCTTC +
Preference number: 4 (lower is better)
Translates to: DQTPDPHLRQKPQGTRCAVIMSF*TQSFSF
Trigger: GAAGCTGAAGGACTGGGTCCAGAAGCTCATGATGAC...GGCACACCGAGTTCCTTGTGGTTTTTGCCTGAGGTGGGGATCCGGTGTCTGATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CCA 90 bp AGTTTATTTTGCAGCTCTTTCAGCAGCCTCTTCAGCGCACCCAAGTGGTCAGGGTGCTGGCTGGGGAACTaGCATAGCACGGAGGTGATG +
Preference number: 4 (lower is better)
Translates to: SLFCSSFSSLFSAPKWSGCWLGN*HSTEVM
Trigger: CATCACCTCCGTGCTATGCCAGTTCCCCAGCCAGCA...CCCTGACCACTTGGGTGCGCTGAAGAGGCTGCTGAAAGAGCTGCAAAATAAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CCA 90 bp AACGTGGTAGAACAAGTGTCTTGTGATCAGACACCGGATCCCCACCTCAGGCAATGGCTATCTGCTGGCTaGGGAACTGGCATAGCACGG +
Preference number: 4 (lower is better)
Translates to: NVVEQVSCDQTPDPHLRQWLSAG*GTGIAR
Trigger: CCGTGCTATGCCAGTTCCCCAGCCAGCAGATAGCCA...TTGCCTGAGGTGGGGATCCGGTGTCTGATCACAAGACACTTGTTCTACCACGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CCA 90 bp CCTGGTTCAGTTGGCCTCAGAGAGGCAGTGGCAGAATTATCCACTGGGACAAACATGGTGGCTATCTGCTaGCTGGGGAACTGGCATAGC +
Preference number: 4 (lower is better)
Translates to: PGSVGLREAVAELSTGTNMVAIC*LGNWHS
Trigger: GCTATGCCAGTTCCCCAGCCAGCAGATAGCCACCAT...GTTTGTCCCAGTGGATAATTCTGCCACTGCCTCTCTGAGGCCAACTGAACCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CCA 90 bp CTTTCCTCCACATCAAGAGGACCTTGCCCAGAAGAACCCTTTATCCCCCAAGAACCGCTGCGGTATCTCTaGACCAGCTGCACGATGCTC +
Preference number: 4 (lower is better)
Translates to: LSSTSRGPCPEEPFIPQEPLRYL*TSCTML
Trigger: GAGCATCGTGCAGCTGGTCCAGAGATACCGCAGCGG...TTCTTGGGGGATAAAGGGTTCTTCTGGGCAAGGTCCTCTTGATGTGGAGGAAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CCA 90 bp TCTCATTCGGGTCCTGATGCTGCGGTGCCTGGCAGTGCTGGGAAAGTCTCTGTATTCTTCTTGGCCACCTaGGAGTGTGAGAAGATGCAG +
Preference number: 4 (lower is better)
Translates to: SHSGPDAAVPGSAGKVSVFFLAT*ECEKMQ
Trigger: CTGCATCTTCTCACACTCCCAGGTGGCCAAGAAGAA...TACAGAGACTTTCCCAGCACTGCCAGGCACCGCAGCATCAGGACCCGAATGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CCA 90 bp GCCTGGTTCAGTTGGCCTCAGAGAGGCAGTGGCAGAATTATCCACTGGGACAAAGGCCGTACATGTCGATaGCGGACAGGAAGATGGACT +
Preference number: 4 (lower is better)
Translates to: AWFSWPQRGSGRIIHWDKGRTCR*RTGRWT
Trigger: AGTCCATCTTCCTGTCCGCCATCGACATGTACGGCC...TTTGTCCCAGTGGATAATTCTGCCACTGCCTCTCTGAGGCCAACTGAACCAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CCA 90 bp AGTTTATTTTGCAGCTCTTTCAGCAGCCTCTTCAGCGCACCCAAGTGGTCAGGGTCTGGGCAGAACTGGTaGCCGTACATGTCGATGGCG +
Preference number: 4 (lower is better)
Translates to: SLFCSSFSSLFSAPKWSGSGQNW*PYMSMA
Trigger: CGCCATCGACATGTACGGCCACCAGTTCTGCCCAGA...CCCTGACCACTTGGGTGCGCTGAAGAGGCTGCTGAAAGAGCTGCAAAATAAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CCA 90 bp GAGCCTGGGAACCGAGGCAGTAACTCTCCTCCAGCCATGCTGAATGCTAGGTGTTTTTCTGGGCAGAACTaGTGGCCGTACATGTCGATG +
Preference number: 4 (lower is better)
Translates to: EPGNRGSNSPPAMLNARCFSGQN*WPYMSM
Trigger: CATCGACATGTACGGCCACCAGTTCTGCCCAGAAAA...ACACCTAGCATTCAGCATGGCTGGAGGAGAGTTACTGCCTCGGTTCCCAGGCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CCA 90 bp GCCTCAGAGAGGCAGTGGCAGAATTATCCACTGGGACAAACCCTGAAGTCCCCACGGATAAAGAACCTGTaGTCGGTCACCTCCAACCCT +
Preference number: 4 (lower is better)
Translates to: ASERQWQNYPLGQTLKSPRIKNL*SVTSNP
Trigger: AGGGTTGGAGGTGACCGACCACAGGTTCTTTATCCG...TGGGGACTTCAGGGTTTGTCCCAGTGGATAATTCTGCCACTGCCTCTCTGAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CCA 90 bp AACGTGGTAGAACAAGTGTCTTGTGATCAGACACCGGATCCCCACCTCAGGCAATGGGAGTTTTCCACCTaGATCACCCGCTGGCCAAGC +
Preference number: 4 (lower is better)
Translates to: NVVEQVSCDQTPDPHLRQWEFST*ITRWPS
Trigger: GCTTGGCCAGCGGGTGATCCAGGTGGAAAACTCCCA...TTGCCTGAGGTGGGGATCCGGTGTCTGATCACAAGACACTTGTTCTACCACGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CCA 90 bp AGTTTATTTTGCAGCTCTTTCAGCAGCCTCTTCAGCGCACCCAAGTGGTCAGGGTGCTGTTCCAGCCACTaGACCACCACCTGGTTGCTG +
Preference number: 4 (lower is better)
Translates to: SLFCSSFSSLFSAPKWSGCCSSH*TTTWLL
Trigger: CAGCAACCAGGTGGTGGTCCAGTGGCTGGAACAGCA...CCCTGACCACTTGGGTGCGCTGAAGAGGCTGCTGAAAGAGCTGCAAAATAAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR TCA 90 bp AACGTGGTAGAACAAGTGTCTTGTGATCAGACACCGGATCCCCACCTCAGGCAAGCGCAGCAGGCAGGTTaGCATCTGCGATCATTTCAG +
Preference number: 4 (lower is better)
Translates to: NVVEQVSCDQTPDPHLRQAQQAG*HLRSFQ
Trigger: CTGAAATGATCGCAGATGTCAACCTGCCTGCTGCGC...TTGCCTGAGGTGGGGATCCGGTGTCTGATCACAAGACACTTGTTCTACCACGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR TCA 90 bp GCCTCAGAGAGGCAGTGGCAGAATTATCCACTGGGACAAACCCTGAAGTCCCCAGCACGTTCAGGGTCATaGTCATCTTCATCACCTCCA +
Preference number: 4 (lower is better)
Translates to: ASERQWQNYPLGQTLKSPARSGS*SSSSPP
Trigger: TGGAGGTGATGAAGATGATCATGACCCTGAACGTGC...TGGGGACTTCAGGGTTTGTCCCAGTGGATAATTCTGCCACTGCCTCTCTGAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR TCA 90 bp CTTTCCTCCACATCAAGAGGACCTTGCCCAGAAGAACCCTTTATCCCCCAAGAATTCTGCTCAGCTGCGTaGGCTCACAGAGGATGGAGG +
Preference number: 4 (lower is better)
Translates to: LSSTSRGPCPEEPFIPQEFCSAA*AHRGWR
Trigger: CCTCCATCCTCTGTGAGCTCACGCAGCTGAGCAGAA...TTCTTGGGGGATAAAGGGTTCTTCTGGGCAAGGTCCTCTTGATGTGGAGGAAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR TCA 90 bp GATCAGACACCGGATCCCCACCTCAGGCAAAAACCACAAGGAACTCGGTGTGCCAAGTGCACGCCTTACTaGAGAGAAGAGTGTCTGTCT +
Preference number: 4 (lower is better)
Translates to: DQTPDPHLRQKPQGTRCAKCTPY*REECLS
Trigger: AGACAGACACTCTTCTCTTCAGTAAGGCGTGCACTT...GGCACACCGAGTTCCTTGTGGTTTTTGCCTGAGGTGGGGATCCGGTGTCTGATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR TCA 90 bp GCTGCGGTGCCTGGCAGTGCTGGGAAAGTCTCTGTAAGCGGATCCAGAGTGTTCCTATCTGAGGTTGTCTaGCGGATGTTGATCTTAACC +
Preference number: 4 (lower is better)
Translates to: AAVPGSAGKVSVSGSRVFLSEVV*RMLILT
Trigger: GGTTAAGATCAACATCCGTCAGACAACCTCAGATAG...GAACACTCTGGATCCGCTTACAGAGACTTTCCCAGCACTGCCAGGCACCGCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR TCA 90 bp GTGTGCCTGGTTCAGTTGGCCTCAGAGAGGCAGTGGCAGAATTATCCACTGGGACTTGGAATATCTGTTTaGTCTCCTCAGCCAGGCCCA +
Preference number: 4 (lower is better)
Translates to: VCLVQLASERQWQNYPLGLGISV*SPQPGP
Trigger: TGGGCCTGGCTGAGGAGATCAAACAGATATTCCAAG...TCCCAGTGGATAATTCTGCCACTGCCTCTCTGAGGCCAACTGAACCAGGCACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR TCA 90 bp TTTGCAGCTCTTTCAGCAGCCTCTTCAGCGCACCCAAGTGGTCAGGGTGGCAGCCCAGCACATCAGAAATaGTTCCTTTCTCCAGCATGT +
Preference number: 4 (lower is better)
Translates to: FAALSAASSAHPSGQGGSPAHQK*FLSPAC
Trigger: ACATGCTGGAGAAAGGAATCATTTCTGATGTGCTGG...GCTGCCACCCTGACCACTTGGGTGCGCTGAAGAGGCTGCTGAAAGAGCTGCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR TCA 90 bp GAGCCTGGGAACCGAGGCAGTAACTCTCCTCCAGCCATGCTGAATGCTAGGTGTCCCGCTTCAGATAATTaGTGTTTTCACGGATGGTGG +
Preference number: 4 (lower is better)
Translates to: EPGNRGSNSPPAMLNARCPASDN*CFHGWW
Trigger: CCACCATCCGTGAAAACATCAATTATCTGAAGCGGG...ACACCTAGCATTCAGCATGGCTGGAGGAGAGTTACTGCCTCGGTTCCCAGGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR GCA 90 bp GAGCCTGGGAACCGAGGCAGTAACTCTCCTCCAGCCATGCTGAATGCTAGGTGTATCACTTGTGTTCAATaGAGCCTCCTGGGACAGAGT +
Preference number: 4 (lower is better)
Translates to: EPGNRGSNSPPAMLNARCITCVQ*SLLGQS
Trigger: ACTCTGTCCCAGGAGGCTGCATTGAACACAAGTGAT...ACACCTAGCATTCAGCATGGCTGGAGGAGAGTTACTGCCTCGGTTCCCAGGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR GCA 90 bp GATCAGACACCGGATCCCCACCTCAGGCAAAAACCACAAGGAACTCGGTGTGCCCATCTTGATGTACTCTaGGTTGGCCTTCAGATCCTC +
Preference number: 4 (lower is better)
Translates to: DQTPDPHLRQKPQGTRCAHLDVL*VGLQIL
Trigger: GAGGATCTGAAGGCCAACGCAGAGTACATCAAGATG...GGCACACCGAGTTCCTTGTGGTTTTTGCCTGAGGTGGGGATCCGGTGTCTGATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR GCA 90 bp AGTTTATTTTGCAGCTCTTTCAGCAGCCTCTTCAGCGCACCCAAGTGGTCAGGGCATCGGGAAGTCCTCTaGACTCTCAGCCTTGCGGAT +
Preference number: 4 (lower is better)
Translates to: SLFCSSFSSLFSAPKWSGHREVL*TLSLAD
Trigger: ATCCGCAAGGCTGAGAGTGCAGAGGACTTCCCGATG...CCCTGACCACTTGGGTGCGCTGAAGAGGCTGCTGAAAGAGCTGCAAAATAAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR GCA 90 bp AACGTGGTAGAACAAGTGTCTTGTGATCAGACACCGGATCCCCACCTCAGGCAAATGGCGATCTGCAACTaGGCAGCAGGCAGGTTGACA +
Preference number: 4 (lower is better)
Translates to: NVVEQVSCDQTPDPHLRQMAICN*AAGRLT
Trigger: TGTCAACCTGCCTGCTGCGCAGTTGCAGATCGCCAT...TTGCCTGAGGTGGGGATCCGGTGTCTGATCACAAGACACTTGTTCTACCACGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR GCA 90 bp GCCTCAGAGAGGCAGTGGCAGAATTATCCACTGGGACAAACCCTGAAGTCCCCAACACGTTCTTGTTGCTaGGGAAGTTCAGCTCCTGCA +
Preference number: 4 (lower is better)
Translates to: ASERQWQNYPLGQTLKSPTRSCC*GSSAPA
Trigger: TGCAGGAGCTGAACTTCCGCAGCAACAAGAACGTGT...TGGGGACTTCAGGGTTTGTCCCAGTGGATAATTCTGCCACTGCCTCTCTGAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR GCA 90 bp GCCTGGTTCAGTTGGCCTCAGAGAGGCAGTGGCAGAATTATCCACTGGGACAAATCTGAACATCGCGTCTaGCACATTCAAGGCCCCACA +
Preference number: 4 (lower is better)
Translates to: AWFSWPQRGSGRIIHWDKSEHRV*HIQGPT
Trigger: TGTGGGGCCTTGAATGTGGCAGACGCGATGTTCAGA...TTTGTCCCAGTGGATAATTCTGCCACTGCCTCTCTGAGGCCAACTGAACCAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR GCA 90 bp AGTTTATTTTGCAGCTCTTTCAGCAGCCTCTTCAGCGCACCCAAGTGGTCAGGGTCCTCCACCGTATACTaGATCAGCTTCCCAGCCGAG +
Preference number: 4 (lower is better)
Translates to: SLFCSSFSSLFSAPKWSGSSTVY*ISFPAE
Trigger: CTCGGCTGGGAAGCTGATGCAGTATACGGTGGAGGA...CCCTGACCACTTGGGTGCGCTGAAGAGGCTGCTGAAAGAGCTGCAAAATAAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR GCA 90 bp GCCTCAGAGAGGCAGTGGCAGAATTATCCACTGGGACAAACCCTGAAGTCCCCAGTGATCAGGTCTGAGTaGCGGATAATGGCTCGGATA +
Preference number: 4 (lower is better)
Translates to: ASERQWQNYPLGQTLKSPVIRSE*RIMARI
Trigger: TATCCGAGCCATTATCCGGCACTCAGACCTGATCAC...TGGGGACTTCAGGGTTTGTCCCAGTGGATAATTCTGCCACTGCCTCTCTGAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR GCA 90 bp CAAGGAACTCGGTGTGCCTGGTTCAGTTGGCCTCAGAGAGGCAGTGGCAGAATTGTGATCAGGTCTGAGTaGCGGATAATGGCTCGGATA +
Preference number: 4 (lower is better)
Translates to: QGTRCAWFSWPQRGSGRIVIRSE*RIMARI
Trigger: TATCCGAGCCATTATCCGGCACTCAGACCTGATCAC...AATTCTGCCACTGCCTCTCTGAGGCCAACTGAACCAGGCACACCGAGTTCCTTG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR GCA 90 bp TCTCATTCGGGTCCTGATGCTGCGGTGCCTGGCAGTGCTGGGAAAGTCTCTGTATTGATCAGCATCCCATaGAGGCTACCTTGCTTGTTG +
Preference number: 4 (lower is better)
Translates to: SHSGPDAAVPGSAGKVSVLISIP*RLPCLL
Trigger: CAACAAGCAAGGTAGCCTGCATGGGATGCTGATCAA...TACAGAGACTTTCCCAGCACTGCCAGGCACCGCAGCATCAGGACCCGAATGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR GCA 90 bp GCCTCAGAGAGGCAGTGGCAGAATTATCCACTGGGACAAACCCTGAAGTCCCCATTGGTATGCATGATCTaGACGCCACCTAGCTGGTTG +
Preference number: 4 (lower is better)
Translates to: ASERQWQNYPLGQTLKSPLVCMI*TPPSWL
Trigger: CAACCAGCTAGGTGGCGTGCAGATCATGCATACCAA...TGGGGACTTCAGGGTTTGTCCCAGTGGATAATTCTGCCACTGCCTCTCTGAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR GCA 90 bp GCCTCAGAGAGGCAGTGGCAGAATTATCCACTGGGACAAACCCTGAAGTCCCCATCCAGTAGAAGAAGGTaGGGGCAGTCTTCCATTCCA +
Preference number: 4 (lower is better)
Translates to: ASERQWQNYPLGQTLKSPSSRRR*GQSSIP
Trigger: TGGAATGGAAGACTGCCCGCACCTTCTTCTACTGGA...TGGGGACTTCAGGGTTTGTCCCAGTGGATAATTCTGCCACTGCCTCTCTGAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR GCA 90 bp CTTTCCTCCACATCAAGAGGACCTTGCCCAGAAGAACCCTTTATCCCCCAAGAATCCTTGGCTGACCAGTaGTGTTCCAGCCACTGGACC +
Preference number: 4 (lower is better)
Translates to: LSSTSRGPCPEEPFIPQESLADQ*CSSHWT
Trigger: GGTCCAGTGGCTGGAACAGCACTGGTCAGCCAAGGA...TTCTTGGGGGATAAAGGGTTCTTCTGGGCAAGGTCCTCTTGATGTGGAGGAAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CCA 90 bp GCCTGGTTCAGTTGGCCTCAGAGAGGCAGTGGCAGAATTATCCACTGGGACAAAAGGTGCCGTGCGTTCTaGGCCAGCTTCATTAGAAAG +
Preference number: 4 (lower is better)
Translates to: AWFSWPQRGSGRIIHWDKRCRAF*ASFIRK
Trigger: CTTTCTAATGAAGCTGGCCCAGAACGCACGGCACCT...TTTGTCCCAGTGGATAATTCTGCCACTGCCTCTCTGAGGCCAACTGAACCAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CCA 90 bp AGTTTATTTTGCAGCTCTTTCAGCAGCCTCTTCAGCGCACCCAAGTGGTCAGGGAAGCAGTGCCCAAACTaGGAATCGGCGAACTCGTGC +
Preference number: 4 (lower is better)
Translates to: SLFCSSFSSLFSAPKWSGKQCPN*ESANSC
Trigger: GCACGAGTTCGCCGATTCCCAGTTTGGGCACTGCTT...CCCTGACCACTTGGGTGCGCTGAAGAGGCTGCTGAAAGAGCTGCAAAATAAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CCA 90 bp AACGTGGTAGAACAAGTGTCTTGTGATCAGACACCGGATCCCCACCTCAGGCAAAAGCAGTGCCCAAACTaGGAATCGGCGAACTCGTGC +
Preference number: 4 (lower is better)
Translates to: NVVEQVSCDQTPDPHLRQKQCPN*ESANSC
Trigger: GCACGAGTTCGCCGATTCCCAGTTTGGGCACTGCTT...TTGCCTGAGGTGGGGATCCGGTGTCTGATCACAAGACACTTGTTCTACCACGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CCA 90 bp TCTCATTCGGGTCCTGATGCTGCGGTGCCTGGCAGTGCTGGGAAAGTCTCTGTATCGATATCGTTGTTCTaGAAGCTCTCGGTCTCCAGA +
Preference number: 4 (lower is better)
Translates to: SHSGPDAAVPGSAGKVSVSISLF*KLSVSR
Trigger: TCTGGAGACCGAGAGCTTCCAGAACAACGATATCGA...TACAGAGACTTTCCCAGCACTGCCAGGCACCGCAGCATCAGGACCCGAATGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CCA 90 bp GCCTGGTTCAGTTGGCCTCAGAGAGGCAGTGGCAGAATTATCCACTGGGACAAAGCATCGATCTCGATGTaGCAGCCGTTCATGATGAGG +
Preference number: 4 (lower is better)
Translates to: AWFSWPQRGSGRIIHWDKASISM*QPFMMR
Trigger: CCTCATCATGAACGGCTGCCACATCGAGATCGATGC...TTTGTCCCAGTGGATAATTCTGCCACTGCCTCTCTGAGGCCAACTGAACCAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CCA 90 bp AGTTTATTTTGCAGCTCTTTCAGCAGCCTCTTCAGCGCACCCAAGTGGTCAGGGATGCAGTCCAGCACCTaGGTCATGTCCGGCTTGAAC +
Preference number: 4 (lower is better)
Translates to: SLFCSSFSSLFSAPKWSGMQSST*VMSGLN
Trigger: GTTCAAGCCGGACATGACCCAGGTGCTGGACTGCAT...CCCTGACCACTTGGGTGCGCTGAAGAGGCTGCTGAAAGAGCTGCAAAATAAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CCA 90 bp CTTTCCTCCACATCAAGAGGACCTTGCCCAGAAGAACCCTTTATCCCCCAAGAACATCCGCTGGCACAGTaGGGAGAAGCCACTGTCCAT +
Preference number: 4 (lower is better)
Translates to: LSSTSRGPCPEEPFIPQEHPLAQ*GEATVH
Trigger: ATGGACAGTGGCTTCTCCCCACTGTGCCAGCGGATG...TTCTTGGGGGATAAAGGGTTCTTCTGGGCAAGGTCCTCTTGATGTGGAGGAAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CCA 90 bp AACGTGGTAGAACAAGTGTCTTGTGATCAGACACCGGATCCCCACCTCAGGCAAGATGCATCTTGTGGTTaGCACAGGGCACAGCGGTCA +
Preference number: 4 (lower is better)
Translates to: NVVEQVSCDQTPDPHLRQDASCG*HRAQRS
Trigger: TGACCGCTGTGCCCTGTGCCAACCACAAGATGCATC...TTGCCTGAGGTGGGGATCCGGTGTCTGATCACAAGACACTTGTTCTACCACGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CCA 90 bp GAGCCTGGGAACCGAGGCAGTAACTCTCCTCCAGCCATGCTGAATGCTAGGTGTCTGCCTGAACATCTCTaGGAAGTCGTACACATAGGT +
Preference number: 4 (lower is better)
Translates to: EPGNRGSNSPPAMLNARCLPEHL*EVVHIG
Trigger: ACCTATGTGTACGACTTCCCAGAGATGTTCAGGCAG...ACACCTAGCATTCAGCATGGCTGGAGGAGAGTTACTGCCTCGGTTCCCAGGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CCA 90 bp GCCTCAGAGAGGCAGTGGCAGAATTATCCACTGGGACAAACCCTGAAGTCCCCACCGAAAGAGCCGATTTaGAAGGTGATGTCATTGCCG +
Preference number: 4 (lower is better)
Translates to: ASERQWQNYPLGQTLKSPPKEPI*KVMSLP
Trigger: CGGCAATGACATCACCTTCCAAATCGGCTCTTTCGG...TGGGGACTTCAGGGTTTGTCCCAGTGGATAATTCTGCCACTGCCTCTCTGAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CCA 90 bp AACGTGGTAGAACAAGTGTCTTGTGATCAGACACCGGATCCCCACCTCAGGCAATTTGTGGGGATCCTCTaGGTCCACCCAAGCCACTTG +
Preference number: 4 (lower is better)
Translates to: NVVEQVSCDQTPDPHLRQFVGIL*VHPSHL
Trigger: CAAGTGGCTTGGGTGGACCCAGAGGATCCCCACAAA...TTGCCTGAGGTGGGGATCCGGTGTCTGATCACAAGACACTTGTTCTACCACGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CCA 90 bp GCCTCAGAGAGGCAGTGGCAGAATTATCCACTGGGACAAACCCTGAAGTCCCCACACCTAGCTGGTTGTTaGACGTGTAGACCTCTCTTC +
Preference number: 4 (lower is better)
Translates to: ASERQWQNYPLGQTLKSPHLAGC*TCRPLF
Trigger: GAAGAGAGGTCTACACGTCCAACAACCAGCTAGGTG...TGGGGACTTCAGGGTTTGTCCCAGTGGATAATTCTGCCACTGCCTCTCTGAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CCA 90 bp AATTATCCACTGGGACAAACCCTGAAGTCCCCAGGTGAGGAGAGGCTGGGCCCGGTAGGGAGCTTTGGTTaGGGTGAATTCAATTTCCCT +
Preference number: 4 (lower is better)
Translates to: NYPLGQTLKSPGEERLGPVGSFG*GEFNFP
Trigger: AGGGAAATTGAATTCACCCCAACCAAAGCTCCCTAC...CGGGCCCAGCCTCTCCTCACCTGGGGACTTCAGGGTTTGTCCCAGTGGATAATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CCA 90 bp TCTCATTCGGGTCCTGATGCTGCGGTGCCTGGCAGTGCTGGGAAAGTCTCTGTATCTTGGACCAGACTTTaGATGGTCTTGAGGACAGAG +
Preference number: 4 (lower is better)
Translates to: SHSGPDAAVPGSAGKVSVSWTRL*MVLRTE
Trigger: CTCTGTCCTCAAGACCATCCAAAGTCTGGTCCAAGA...TACAGAGACTTTCCCAGCACTGCCAGGCACCGCAGCATCAGGACCCGAATGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
3UTR CAA 72 bp TGTCCAGAAGTCGCTGGTCAGGAACCGCAGCTACATTaGGAGTGGCTCCGTGAGTTTTCCCAAAATAAGCCC +
Preference number: 4 (lower is better)
Translates to: CPEVAGQEPQLH*EWLREFSQNKP
Trigger: GGGCTTATTTTGGGAAAACTCACGGAGCCACTCCAAATGTAGCTGCGGTTCCTGACCAGCGACTTCTGGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
3UTR CAA 72 bp GCAAAAACCACAAGGAACTCGGTGTGCCTGGTTCAGTaGGCCTCAGAGAGGCAGTGGCAGAATTATCCACTG +
Preference number: 4 (lower is better)
Translates to: AKTTRNSVCLVQ*ASERQWQNYPL
Trigger: CAGTGGATAATTCTGCCACTGCCTCTCTGAGGCCAACTGAACCAGGCACACCGAGTTCCTTGTGGTTTTTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR TCA 90 bp CAAGGAACTCGGTGTGCCTGGTTCAGTTGGCCTCAGAGAGGCAGTGGCAGAATTCGCCTTCGGAGGCTTTaGTCATCAAAGGAAATCCTA +
Preference number: 4 (lower is better)
Translates to: QGTRCAWFSWPQRGSGRIRLRRL*SSKEIL
Trigger: TAGGATTTCCTTTGATGATCAAAGCCTCCGAAGGCG...AATTCTGCCACTGCCTCTCTGAGGCCAACTGAACCAGGCACACCGAGTTCCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR TCA 90 bp AACGTGGTAGAACAAGTGTCTTGTGATCAGACACCGGATCCCCACCTCAGGCAAAGAAGCCACTGTCCATaGAGAGTTCTGTGCTGTGCC +
Preference number: 4 (lower is better)
Translates to: NVVEQVSCDQTPDPHLRQRSHCP*RVLCCA
Trigger: GGCACAGCACAGAACTCTTCATGGACAGTGGCTTCT...TTGCCTGAGGTGGGGATCCGGTGTCTGATCACAAGACACTTGTTCTACCACGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR TCA 90 bp GCCTCAGAGAGGCAGTGGCAGAATTATCCACTGGGACAAACCCTGAAGTCCCCATGGCAAAGCAGGAGATaGCTTCATCAAAGTTCCTGG +
Preference number: 4 (lower is better)
Translates to: ASERQWQNYPLGQTLKSPWQSRR*LHQSSW
Trigger: CCAGGAACTTTGATGAAGTCATCTCCTGCTTTGCCA...TGGGGACTTCAGGGTTTGTCCCAGTGGATAATTCTGCCACTGCCTCTCTGAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR GCA 90 bp AACGTGGTAGAACAAGTGTCTTGTGATCAGACACCGGATCCCCACCTCAGGCAACTCTTGATGTGTGCCTaGTTCCTGTCCTCTCTGGAG +
Preference number: 4 (lower is better)
Translates to: NVVEQVSCDQTPDPHLRQLLMCA*FLSSLE
Trigger: CTCCAGAGAGGACAGGAAGCAGGCACACATCAAGAG...TTGCCTGAGGTGGGGATCCGGTGTCTGATCACAAGACACTTGTTCTACCACGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR GCA 90 bp TCTCATTCGGGTCCTGATGCTGCGGTGCCTGGCAGTGCTGGGAAAGTCTCTGTAACGGTGAAATCTCTGTaGAGGTCCAGTTTCTTGTGT +
Preference number: 4 (lower is better)
Translates to: SHSGPDAAVPGSAGKVSVTVKSL*RSSFLC
Trigger: ACACAAGAAACTGGACCTGCACAGAGATTTCACCGT...TACAGAGACTTTCCCAGCACTGCCAGGCACCGCAGCATCAGGACCCGAATGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR GCA 90 bp GCCTGGTTCAGTTGGCCTCAGAGAGGCAGTGGCAGAATTATCCACTGGGACAAAAGGCAGGTTGACATCTaGGATCATTTCAGTGCACGG +
Preference number: 4 (lower is better)
Translates to: AWFSWPQRGSGRIIHWDKRQVDI*DHFSAR
Trigger: CCGTGCACTGAAATGATCGCAGATGTCAACCTGCCT...TTTGTCCCAGTGGATAATTCTGCCACTGCCTCTCTGAGGCCAACTGAACCAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR GCA 90 bp CCTGGTTCAGTTGGCCTCAGAGAGGCAGTGGCAGAATTATCCACTGGGACAAACTCGAAGAATCCACTCTaGCAGGTCCCCTTCAGAGTT +
Preference number: 4 (lower is better)
Translates to: PGSVGLREAVAELSTGTNSKNPL*QVPFRV
Trigger: AACTCTGAAGGGGACCTGGCAGAGTGGATTCTTCGA...GTTTGTCCCAGTGGATAATTCTGCCACTGCCTCTCTGAGGCCAACTGAACCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR GCA 90 bp GCCTGGTTCAGTTGGCCTCAGAGAGGCAGTGGCAGAATTATCCACTGGGACAAAAGTCTGGGCCCAGGGTaGCATGATTTCCTTGAAACT +
Preference number: 4 (lower is better)
Translates to: AWFSWPQRGSGRIIHWDKSLGPG*HDFLET
Trigger: AGTTTCAAGGAAATCATGGCACCCTGGGCCCAGACT...TTTGTCCCAGTGGATAATTCTGCCACTGCCTCTCTGAGGCCAACTGAACCAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CCA 90 bp AACGTGGTAGAACAAGTGTCTTGTGATCAGACACCGGATCCCCACCTCAGGCAAGTTGGTTTGGAGTTCTaGGGAGGGCCAGGTGTCATT +
Preference number: 4 (lower is better)
Translates to: NVVEQVSCDQTPDPHLRQVGLEF*GGPGVI
Trigger: AATGACACCTGGCCCTCCCCAGAACTCCAAACCAAC...TTGCCTGAGGTGGGGATCCGGTGTCTGATCACAAGACACTTGTTCTACCACGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CCA 90 bp TCTCATTCGGGTCCTGATGCTGCGGTGCCTGGCAGTGCTGGGAAAGTCTCTGTATTTACACAGCAGCTCTaGAAGTTTGGGGTTTTCCGA +
Preference number: 4 (lower is better)
Translates to: SHSGPDAAVPGSAGKVSVFTQQL*KFGVFR
Trigger: TCGGAAAACCCCAAACTTCCAGAGCTGCTGTGTAAA...TACAGAGACTTTCCCAGCACTGCCAGGCACCGCAGCATCAGGACCCGAATGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CCA 90 bp CAAGGAACTCGGTGTGCCTGGTTCAGTTGGCCTCAGAGAGGCAGTGGCAGAATTCTTAAAGCCCTCATCTaGGTTTTCGCTGGTGATCCT +
Preference number: 4 (lower is better)
Translates to: QGTRCAWFSWPQRGSGRILKALI*VFAGDP
Trigger: AGGATCACCAGCGAAAACCCAGATGAGGGCTTTAAG...AATTCTGCCACTGCCTCTCTGAGGCCAACTGAACCAGGCACACCGAGTTCCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CCA 90 bp GTGTGCCTGGTTCAGTTGGCCTCAGAGAGGCAGTGGCAGAATTATCCACTGGGAGCTCATCTATCAGCATaGTCACCAGCTGGTTCTTCT +
Preference number: 4 (lower is better)
Translates to: VCLVQLASERQWQNYPLGAHLSA*SPAGSS
Trigger: AGAAGAACCAGCTGGTGACCATGCTGATAGATGAGC...TCCCAGTGGATAATTCTGCCACTGCCTCTCTGAGGCCAACTGAACCAGGCACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CCA 90 bp TCTCATTCGGGTCCTGATGCTGCGGTGCCTGGCAGTGCTGGGAAAGTCTCTGTATTTCTTGAGATTTTCTaGGCAGAACTGGTGGCCGTA +
Preference number: 4 (lower is better)
Translates to: SHSGPDAAVPGSAGKVSVFLEIF*AELVAV
Trigger: TACGGCCACCAGTTCTGCCCAGAAAATCTCAAGAAA...TACAGAGACTTTCCCAGCACTGCCAGGCACCGCAGCATCAGGACCCGAATGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CCA 90 bp AACGTGGTAGAACAAGTGTCTTGTGATCAGACACCGGATCCCCACCTCAGGCAAAGAGGCGGATGGGGATaGCACTATCTGAGGTTGTCT +
Preference number: 4 (lower is better)
Translates to: NVVEQVSCDQTPDPHLRQRGGWG*HYLRLS
Trigger: AGACAACCTCAGATAGTGCCATCCCCATCCGCCTCT...TTGCCTGAGGTGGGGATCCGGTGTCTGATCACAAGACACTTGTTCTACCACGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CCA 90 bp CAAGGAACTCGGTGTGCCTGGTTCAGTTGGCCTCAGAGAGGCAGTGGCAGAATTCTGCCTGAACATCTCTaGGAAGTCGTACACATAGGT +
Preference number: 4 (lower is better)
Translates to: QGTRCAWFSWPQRGSGRILPEHL*EVVHIG
Trigger: ACCTATGTGTACGACTTCCCAGAGATGTTCAGGCAG...AATTCTGCCACTGCCTCTCTGAGGCCAACTGAACCAGGCACACCGAGTTCCTTG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CCA 90 bp CAAGGAACTCGGTGTGCCTGGTTCAGTTGGCCTCAGAGAGGCAGTGGCAGAATTTTTGGGGTACTTCTCTaGGGAGCCCCACAGTTTAAA +
Preference number: 4 (lower is better)
Translates to: QGTRCAWFSWPQRGSGRIFGVLL*GAPQFK
Trigger: TTTAAACTGTGGGGCTCCCCAGAGAAGTACCCCAAA...AATTCTGCCACTGCCTCTCTGAGGCCAACTGAACCAGGCACACCGAGTTCCTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CCA 90 bp GATCAGACACCGGATCCCCACCTCAGGCAAAAACCACAAGGAACTCGGTGTGCCGTAGGGAGCTTTGGTTaGGGTGAATTCAATTTCCCT +
Preference number: 4 (lower is better)
Translates to: DQTPDPHLRQKPQGTRCAVGSFG*GEFNFP
Trigger: AGGGAAATTGAATTCACCCCAACCAAAGCTCCCTAC...GGCACACCGAGTTCCTTGTGGTTTTTGCCTGAGGTGGGGATCCGGTGTCTGATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR TCA 90 bp CCTGGTTCAGTTGGCCTCAGAGAGGCAGTGGCAGAATTATCCACTGGGACAAACAAGTGCACGCCTTACTaGAGAGAAGAGTGTCTGTCT +
Preference number: 4 (lower is better)
Translates to: PGSVGLREAVAELSTGTNKCTPY*REECLS
Trigger: AGACAGACACTCTTCTCTTCAGTAAGGCGTGCACTT...GTTTGTCCCAGTGGATAATTCTGCCACTGCCTCTCTGAGGCCAACTGAACCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR TCA 90 bp AACGTGGTAGAACAAGTGTCTTGTGATCAGACACCGGATCCCCACCTCAGGCAACTTCTCTATAGAGGCTaGTGTCCAGGTAGTAGCCAG +
Preference number: 4 (lower is better)
Translates to: NVVEQVSCDQTPDPHLRQLLYRG*CPGSSQ
Trigger: CTGGCTACTACCTGGACATCAGCCTCTATAGAGAAG...TTGCCTGAGGTGGGGATCCGGTGTCTGATCACAAGACACTTGTTCTACCACGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR TCA 90 bp AGTTTATTTTGCAGCTCTTTCAGCAGCCTCTTCAGCGCACCCAAGTGGTCAGGGCTTCTCTATAGAGGCTaGTGTCCAGGTAGTAGCCAG +
Preference number: 4 (lower is better)
Translates to: SLFCSSFSSLFSAPKWSGLLYRG*CPGSSQ
Trigger: CTGGCTACTACCTGGACATCAGCCTCTATAGAGAAG...CCCTGACCACTTGGGTGCGCTGAAGAGGCTGCTGAAAGAGCTGCAAAATAAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR TCA 90 bp GCCTCAGAGAGGCAGTGGCAGAATTATCCACTGGGACAAACCCTGAAGTCCCCAGTCCTTCGGTATAAATaGCAGCCATTCCAGAATGGT +
Preference number: 4 (lower is better)
Translates to: ASERQWQNYPLGQTLKSPVLRYK*QPFQNG
Trigger: ACCATTCTGGAATGGCTGTCATTTATACCGAAGGAC...TGGGGACTTCAGGGTTTGTCCCAGTGGATAATTCTGCCACTGCCTCTCTGAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR GCA 90 bp AACGTGGTAGAACAAGTGTCTTGTGATCAGACACCGGATCCCCACCTCAGGCAATTGGTATGCATGATCTaGACGCCACCTAGCTGGTTG +
Preference number: 4 (lower is better)
Translates to: NVVEQVSCDQTPDPHLRQLVCMI*TPPSWL
Trigger: CAACCAGCTAGGTGGCGTGCAGATCATGCATACCAA...TTGCCTGAGGTGGGGATCCGGTGTCTGATCACAAGACACTTGTTCTACCACGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CCA 90 bp GCCTCAGAGAGGCAGTGGCAGAATTATCCACTGGGACAAACCCTGAAGTCCCCATTTCTTGAGATTTTCTaGGCAGAACTGGTGGCCGTA +
Preference number: 4 (lower is better)
Translates to: ASERQWQNYPLGQTLKSPFLEIF*AELVAV
Trigger: TACGGCCACCAGTTCTGCCCAGAAAATCTCAAGAAA...TGGGGACTTCAGGGTTTGTCCCAGTGGATAATTCTGCCACTGCCTCTCTGAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CCA 90 bp CCTGGTTCAGTTGGCCTCAGAGAGGCAGTGGCAGAATTATCCACTGGGACAAACCGTGATAGAAGAAAGTaGGCAGGACGTCGAATATGG +
Preference number: 4 (lower is better)
Translates to: PGSVGLREAVAELSTGTNRDRRK*AGRRIW
Trigger: CCATATTCGACGTCCTGCCCACTTTCTTCTATCACG...GTTTGTCCCAGTGGATAATTCTGCCACTGCCTCTCTGAGGCCAACTGAACCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CCA 90 bp CTTTCCTCCACATCAAGAGGACCTTGCCCAGAAGAACCCTTTATCCCCCAAGAACCGGTGAGGATGATGTaGGAGTTTTCCACCTGGATC +
Preference number: 4 (lower is better)
Translates to: LSSTSRGPCPEEPFIPQEPVRMM*EFSTWI
Trigger: GATCCAGGTGGAAAACTCCCACATCATCCTCACCGG...TTCTTGGGGGATAAAGGGTTCTTCTGGGCAAGGTCCTCTTGATGTGGAGGAAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CCA 90 bp AACGTGGTAGAACAAGTGTCTTGTGATCAGACACCGGATCCCCACCTCAGGCAACACCTAGCTGGTTGTTaGACGTGTAGACCTCTCTTC +
Preference number: 4 (lower is better)
Translates to: NVVEQVSCDQTPDPHLRQHLAGC*TCRPLF
Trigger: GAAGAGAGGTCTACACGTCCAACAACCAGCTAGGTG...TTGCCTGAGGTGGGGATCCGGTGTCTGATCACAAGACACTTGTTCTACCACGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CCA 90 bp CCTGGTTCAGTTGGCCTCAGAGAGGCAGTGGCAGAATTATCCACTGGGACAAACTCTTGGACCAGACTTTaGATGGTCTTGAGGACAGAG +
Preference number: 4 (lower is better)
Translates to: PGSVGLREAVAELSTGTNSWTRL*MVLRTE
Trigger: CTCTGTCCTCAAGACCATCCAAAGTCTGGTCCAAGA...GTTTGTCCCAGTGGATAATTCTGCCACTGCCTCTCTGAGGCCAACTGAACCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR TCA 90 bp AGTTTATTTTGCAGCTCTTTCAGCAGCCTCTTCAGCGCACCCAAGTGGTCAGGGACTGCTCCCTCAGGTTaGTCACACACTTGTCATAGT +
Preference number: 4 (lower is better)
Translates to: SLFCSSFSSLFSAPKWSGTAPSG*SHTCHS
Trigger: ACTATGACAAGTGTGTGATCAACCTGAGGGAGCAGT...CCCTGACCACTTGGGTGCGCTGAAGAGGCTGCTGAAAGAGCTGCAAAATAAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR TCA 90 bp CCTGGTTCAGTTGGCCTCAGAGAGGCAGTGGCAGAATTATCCACTGGGACAAACCCAGCACATCAGAAATaGTTCCTTTCTCCAGCATGT +
Preference number: 4 (lower is better)
Translates to: PGSVGLREAVAELSTGTNPAHQK*FLSPAC
Trigger: ACATGCTGGAGAAAGGAATCATTTCTGATGTGCTGG...GTTTGTCCCAGTGGATAATTCTGCCACTGCCTCTCTGAGGCCAACTGAACCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR GCA 90 bp CTTTCCTCCACATCAAGAGGACCTTGCCCAGAAGAACCCTTTATCCCCCAAGAAGTTTCCATACTGATCTaGCAAGACCTGGACCTCCAG +
Preference number: 4 (lower is better)
Translates to: LSSTSRGPCPEEPFIPQEVSILI*QDLDLQ
Trigger: CTGGAGGTCCAGGTCTTGGCAGATCAGTATGGAAAC...TTCTTGGGGGATAAAGGGTTCTTCTGGGCAAGGTCCTCTTGATGTGGAGGAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR GCA 90 bp AACGTGGTAGAACAAGTGTCTTGTGATCAGACACCGGATCCCCACCTCAGGCAATTGATCAGCATCCCATaGAGGCTACCTTGCTTGTTG +
Preference number: 4 (lower is better)
Translates to: NVVEQVSCDQTPDPHLRQLISIP*RLPCLL
Trigger: CAACAAGCAAGGTAGCCTGCATGGGATGCTGATCAA...TTGCCTGAGGTGGGGATCCGGTGTCTGATCACAAGACACTTGTTCTACCACGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR GCA 90 bp CTTTCCTCCACATCAAGAGGACCTTGCCCAGAAGAACCCTTTATCCCCCAAGAATCGATGTGCTTGCAGTaGACTGAGTTCTGGGAACTG +
Preference number: 4 (lower is better)
Translates to: LSSTSRGPCPEEPFIPQESMCLQ*TEFWEL
Trigger: CAGTTCCCAGAACTCAGTGCACTGCAAGCACATCGA...TTCTTGGGGGATAAAGGGTTCTTCTGGGCAAGGTCCTCTTGATGTGGAGGAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CCA 90 bp AGTTTATTTTGCAGCTCTTTCAGCAGCCTCTTCAGCGCACCCAAGTGGTCAGGGTCGATATCGTTGTTCTaGAAGCTCTCGGTCTCCAGA +
Preference number: 4 (lower is better)
Translates to: SLFCSSFSSLFSAPKWSGSISLF*KLSVSR
Trigger: TCTGGAGACCGAGAGCTTCCAGAACAACGATATCGA...CCCTGACCACTTGGGTGCGCTGAAGAGGCTGCTGAAAGAGCTGCAAAATAAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CCA 90 bp AACGTGGTAGAACAAGTGTCTTGTGATCAGACACCGGATCCCCACCTCAGGCAAGGGATCTCAGGACAGTaGGGTCGTTTTCCTTTTCAA +
Preference number: 4 (lower is better)
Translates to: NVVEQVSCDQTPDPHLRQGISGQ*GRFPFQ
Trigger: TTGAAAAGGAAAACGACCCCACTGTCCTGAGATCCC...TTGCCTGAGGTGGGGATCCGGTGTCTGATCACAAGACACTTGTTCTACCACGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CCA 90 bp GAGCCTGGGAACCGAGGCAGTAACTCTCCTCCAGCCATGCTGAATGCTAGGTGTGCAGGACGTCGAATATaGTCGTTTCTGAAAGTATTA +
Preference number: 4 (lower is better)
Translates to: EPGNRGSNSPPAMLNARCAGRRI*SFLKVL
Trigger: TAATACTTTCAGAAACGACCATATTCGACGTCCTGC...ACACCTAGCATTCAGCATGGCTGGAGGAGAGTTACTGCCTCGGTTCCCAGGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CCA 90 bp AACGTGGTAGAACAAGTGTCTTGTGATCAGACACCGGATCCCCACCTCAGGCAACGTGATAGAAGAAAGTaGGCAGGACGTCGAATATGG +
Preference number: 4 (lower is better)
Translates to: NVVEQVSCDQTPDPHLRQRDRRK*AGRRIW
Trigger: CCATATTCGACGTCCTGCCCACTTTCTTCTATCACG...TTGCCTGAGGTGGGGATCCGGTGTCTGATCACAAGACACTTGTTCTACCACGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CCA 90 bp TCTCATTCGGGTCCTGATGCTGCGGTGCCTGGCAGTGCTGGGAAAGTCTCTGTAGGTCTATCCTCCTTATaGTTTTCACCAGATCTTTCT +
Preference number: 4 (lower is better)
Translates to: SHSGPDAAVPGSAGKVSVGLSSL*FSPDLS
Trigger: AGAAAGATCTGGTGAAAACCATAAGGAGGATAGACC...TACAGAGACTTTCCCAGCACTGCCAGGCACCGCAGCATCAGGACCCGAATGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CCA 90 bp AGTTTATTTTGCAGCTCTTTCAGCAGCCTCTTCAGCGCACCCAAGTGGTCAGGGACCTCTGGATGTTCTTaGACCAGACTTTGGATGGTC +
Preference number: 4 (lower is better)
Translates to: SLFCSSFSSLFSAPKWSGTSGCS*TRLWMV
Trigger: GACCATCCAAAGTCTGGTCCAAGAACATCCAGAGGT...CCCTGACCACTTGGGTGCGCTGAAGAGGCTGCTGAAAGAGCTGCAAAATAAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR TCA 90 bp GCCTGGTTCAGTTGGCCTCAGAGAGGCAGTGGCAGAATTATCCACTGGGACAAATCTTGGCAATGTCTATaGTCAGCTCAACATTGGCAT +
Preference number: 4 (lower is better)
Translates to: AWFSWPQRGSGRIIHWDKSWQCL*SAQHWH
Trigger: ATGCCAATGTTGAGCTGATCATAGACATTGCCAAGA...TTTGTCCCAGTGGATAATTCTGCCACTGCCTCTCTGAGGCCAACTGAACCAGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR TCA 90 bp GATCAGACACCGGATCCCCACCTCAGGCAAAAACCACAAGGAACTCGGTGTGCCTTGTTGCCAAAGGAATaGAACATGATATTTCCGGAT +
Preference number: 4 (lower is better)
Translates to: DQTPDPHLRQKPQGTRCALLPKE*NMIFPD
Trigger: ATCCGGAAATATCATGTTTCATTCCTTTGGCAACAA...GGCACACCGAGTTCCTTGTGGTTTTTGCCTGAGGTGGGGATCCGGTGTCTGATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR GCA 90 bp AGTTTATTTTGCAGCTCTTTCAGCAGCCTCTTCAGCGCACCCAAGTGGTCAGGGACGGTGAAATCTCTGTaGAGGTCCAGTTTCTTGTGT +
Preference number: 4 (lower is better)
Translates to: SLFCSSFSSLFSAPKWSGTVKSL*RSSFLC
Trigger: ACACAAGAAACTGGACCTGCACAGAGATTTCACCGT...CCCTGACCACTTGGGTGCGCTGAAGAGGCTGCTGAAAGAGCTGCAAAATAAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CCA 90 bp CTTTCCTCCACATCAAGAGGACCTTGCCCAGAAGAACCCTTTATCCCCCAAGAATTTGGGGTACTTCTCTaGGGAGCCCCACAGTTTAAA +
Preference number: 4 (lower is better)
Translates to: LSSTSRGPCPEEPFIPQEFGVLL*GAPQFK
Trigger: TTTAAACTGTGGGGCTCCCCAGAGAAGTACCCCAAA...TTCTTGGGGGATAAAGGGTTCTTCTGGGCAAGGTCCTCTTGATGTGGAGGAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CCA 90 bp CCTGGTTCAGTTGGCCTCAGAGAGGCAGTGGCAGAATTATCCACTGGGACAAACGCAGGACGTCGAATATaGTCGTTTCTGAAAGTATTA +
Preference number: 4 (lower is better)
Translates to: PGSVGLREAVAELSTGTNAGRRI*SFLKVL
Trigger: TAATACTTTCAGAAACGACCATATTCGACGTCCTGC...GTTTGTCCCAGTGGATAATTCTGCCACTGCCTCTCTGAGGCCAACTGAACCAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR TCA 90 bp CCTGGTTCAGTTGGCCTCAGAGAGGCAGTGGCAGAATTATCCACTGGGACAAACTTGTTGCCAAAGGAATaGAACATGATATTTCCGGAT +
Preference number: 4 (lower is better)
Translates to: PGSVGLREAVAELSTGTNLLPKE*NMIFPD
Trigger: ATCCGGAAATATCATGTTTCATTCCTTTGGCAACAA...GTTTGTCCCAGTGGATAATTCTGCCACTGCCTCTCTGAGGCCAACTGAACCAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CCA 90 bp CTTTCCTCCACATCAAGAGGACCTTGCCCAGAAGAACCCTTTATCCCCCAAGAAGGTCTATCCTCCTTATaGTTTTCACCAGATCTTTCT +
Preference number: 4 (lower is better)
Translates to: LSSTSRGPCPEEPFIPQEGLSSL*FSPDLS
Trigger: AGAAAGATCTGGTGAAAACCATAAGGAGGATAGACC...TTCTTGGGGGATAAAGGGTTCTTCTGGGCAAGGTCCTCTTGATGTGGAGGAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CAA 90 bp GTCCCTCGAAGGCCTGCCGCATGGCCATCCCACCGTCCAGGGTCCTGGGGATGGGCCTCTGGCATGAGCTaGGCAGGGAGTTCCTCTGCT +
Preference number: 5 (lower is better)
Translates to: VPRRPAAWPSHRPGSWGWASGMS*AGSSSA
Trigger: AGCAGAGGAACTCCCTGCCAAGCTCATGCCAGAGGC...CCATCCCCAGGACCCTGGACGGTGGGATGGCCATGCGGCAGGCCTTCGAGGGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS GCA 90 bp CTCCAGCATGTGGCCCGGGGTGTCGTGCAGGTCTGCGAACTGCACTaGCACCTGGTGGTAGATGGGAAGCAGCAGTTCCTCCCGGGCCTT +
Preference number: 5 (lower is better)
Translates to: LQHVARGVVQVCELH*HLVVDGKQQFLPGL
Trigger: AAGGCCCGGGAGGAACTGCTGCTTCCCATCTACCACCAGGTGGCAGTGCAGTTCGCAGACCTGCACGACACCCCGGGCCACATGCTGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS CCA 90 bp GGGTGTCGTGCAGGTCTGCGAACTGCACTGCCACCTGGTGGTAGATaGGAAGCAGCAGTTCCTCCCGGGCCTTCAGCTGGCCCTCCAGCT +
Preference number: 5 (lower is better)
Translates to: GCRAGLRTALPPGGR*EAAVPPGPSAGPPA
Trigger: AGCTGGAGGGCCAGCTGAAGGCCCGGGAGGAACTGCTGCTTCCCATCTACCACCAGGTGGCAGTGCAGTTCGCAGACCTGCACGACACCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS CCA 90 bp AGCGTCGCAGCATGGACTGTGTGTGCTCGTGGTTCAGCTCGGGGCTaGCTCGGAGTATCTCCTGCTTCACCTGGGCCTCCAGCAGCAGCC +
Preference number: 5 (lower is better)
Translates to: SVAAWTVCARGSARG*LGVSPASPGPPAAA
Trigger: GGCTGCTGCTGGAGGCCCAGGTGAAGCAGGAGATACTCCGAGCCAGCCCCGAGCTGAACCACGAGCACACACAGTCCATGCTGCGACGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CAA 90 bp AATTATCCACTGGGACAAACCCTGAAGTCCCCAGGTGAGGAGAGGCTGGGCCCGGGCACGGCCATCCGGTaGGGGTGGGAAGAGGGCAGC +
Preference number: 5 (lower is better)
Translates to: NYPLGQTLKSPGEERLGPGTAIR*GWEEGS
Trigger: GCTGCCCTCTTCCCACCCCAACCGGATGGCCGTGCC...CGGGCCCAGCCTCTCCTCACCTGGGGACTTCAGGGTTTGTCCCAGTGGATAATT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS GCA 90 bp GCGCCCTCAGTCTCCACGAACCAGCGTCGCAGCATGGACTGTGTGTaGTCGTGGTTCAGCTCGGGGCTGGCTCGGAGTATCTCCTGCTTC +
Preference number: 5 (lower is better)
Translates to: APSVSTNQRRSMDCV*SWFSSGLARSISCF
Trigger: GAAGCAGGAGATACTCCGAGCCAGCCCCGAGCTGAACCACGAGCACACACAGTCCATGCTGCGACGCTGGTTCGTGGAGACTGAGGGCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS CCA 90 bp GCTCTCCGTGGTAGACAGCAGCTGAGCCACCTGTATCCGCTCGGCTaGCGTGAGGTGCTGGCTCAGGTAGGCCACGCAGTCCATGATGAC +
Preference number: 5 (lower is better)
Translates to: ALRGRQQLSHLYPLG*REVLAQVGHAVHDD
Trigger: GTCATCATGGACTGCGTGGCCTACCTGAGCCAGCACCTCACGCCAGCCGAGCGGATACAGGTGGCTCAGCTGCTGTCTACCACGGAGAGC
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CAA 90 bp CAGCAGCCTCTTCAGCGCACCCAAGTGGTCAGGGTGGCAGCCAGTGTCGGTCTGGTGCGCACACTGGTGTaGTTGAACGCCACCTCCAGC +
Preference number: 5 (lower is better)
Translates to: QQPLQRTQVVRVAASVGLVRTLV*LNATSS
Trigger: GCTGGAGGTGGCGTTCAACAACACCAGTGTGCGCAC...CAGACCGACACTGGCTGCCACCCTGACCACTTGGGTGCGCTGAAGAGGCTGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CAA 90 bp CTCTTCAGCGCACCCAAGTGGTCAGGGTGGCAGCCAGTGTCGGTCTGGGCTTTCGAGCGCAAGCCGTCCTaGGCTGACCAGTGCTGTTCC +
Preference number: 5 (lower is better)
Translates to: LFSAPKWSGWQPVSVWAFERKPS*ADQCCS
Trigger: GGAACAGCACTGGTCAGCCAAGGACGGCTTGCGCTC...GAAAGCCCAGACCGACACTGGCTGCCACCCTGACCACTTGGGTGCGCTGAAGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS TCA 90 bp GCAGGGGCACGCCCATGGCGATCTGCAACTGCGCAGCAGGCAGGTTaGCATCTGCGATCATTTCAGTGCACGGATGCTCCACCTGCAGGC +
Preference number: 5 (lower is better)
Translates to: AGARPWRSATAQQAG*HLRSFQCTDAPPAG
Trigger: GCCTGCAGGTGGAGCATCCGTGCACTGAAATGATCGCAGATGTCAACCTGCCTGCTGCGCAGTTGCAGATCGCCATGGGCGTGCCCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CAA 90 bp CAGCAGCCTCTTCAGCGCACCCAAGTGGTCAGGGTGGCAGCCAGTGTCGGTCTGCCCCACACGTTCTTGTaGCTGCGGAAGTTCAGCTCC +
Preference number: 5 (lower is better)
Translates to: QQPLQRTQVVRVAASVGLPHTFL*LRKFSS
Trigger: GGAGCTGAACTTCCGCAGCAACAAGAACGTGTGGGG...CAGACCGACACTGGCTGCCACCCTGACCACTTGGGTGCGCTGAAGAGGCTGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS TCA 90 bp CCAGGTGTCATTGGAAGACAGTGGGTTCCTCGGAGGCCTCTGGCATaGGCTTGGCAGGGAGTTCCTCTGCTGACTGGCGTCTCTGGGACC +
Preference number: 5 (lower is better)
Translates to: PGVIGRQWVPRRPLA*AWQGVPLLTGVSGT
Trigger: GGTCCCAGAGACGCCAGTCAGCAGAGGAACTCCCTGCCAAGCTCATGCCAGAGGCCTCCGAGGAACCCACTGTCTTCCAATGACACCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS TCA 90 bp CACACCACCCCAAGCATGATGTCCGGCTTCTCTGCCTGCACCCGCTaGGCGATGAGGTGGTCCAGCCACCCCGTGTCGATATCGTTGTTC +
Preference number: 5 (lower is better)
Translates to: HTTPSMMSGFSACTR*AMRWSSHPVSISLF
Trigger: GAACAACGATATCGACACGGGGTGGCTGGACCACCTCATCGCTCAGCGGGTGCAGGCAGAGAAGCCGGACATCATGCTTGGGGTGGTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS GCA 90 bp TGGGAGGCGATCAGGACCTGTCTGGCTCTGAGGGCAACCTTGCAGTaGTCGCTTCTGCTCAGCTGCGTGAGCTCACAGAGGATGGAGGTC +
Preference number: 5 (lower is better)
Translates to: WEAIRTCLALRATLQ*SLLLSCVSSQRMEV
Trigger: GACCTCCATCCTCTGTGAGCTCACGCAGCTGAGCAGAAGCGAGCACTGCAAGGTTGCCCTCAGAGCCAGACAGGTCCTGATCGCCTCCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS GCA 90 bp CTGTTTGATCTCCTCAGCCAGGCCCATACGGGCCCCGCTGTTAGCTaGCAGGTAGATTTGGGGGATGCCCTCTGTCCGGGCCATCTCAGA +
Preference number: 5 (lower is better)
Translates to: LFDLLSQAHTGPAVS*QVDLGDALCPGHLR
Trigger: TCTGAGATGGCCCGGACAGAGGGCATCCCCCAAATCTACCTGGCAGCTAACAGCGGGGCCCGTATGGGCCTGGCTGAGGAGATCAAACAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS GCA 90 bp CGAAGAATCCACTCTGCCAGGTCCCCTTCAGAGTTGGGTGAGGCCTaGCTGCAAGCATCCACCTGGGGTCGTAGGGAGCTTTGGTTGGGG +
Preference number: 5 (lower is better)
Translates to: RRIHSARSPSELGEA*LQASTWGRRELWLG
Trigger: CCCCAACCAAAGCTCCCTACGACCCCAGGTGGATGCTTGCAGGCAGGCCTCACCCAACTCTGAAGGGGACCTGGCAGAGTGGATTCTTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS CCA 90 bp ATGAAGAAGACCTCTCGGTCCGCCTTACGCTGCAGGGTGGCGGCATaGCAGTCCAGGATGGTGGCTATCTGCTGGCTGGGGAACTGGCAT +
Preference number: 5 (lower is better)
Translates to: MKKTSRSALRCRVAA*QSRMVAICWLGNWH
Trigger: ATGCCAGTTCCCCAGCCAGCAGATAGCCACCATCCTGGACTGCCATGCCGCCACCCTGCAGCGTAAGGCGGACCGAGAGGTCTTCTTCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS CCA 90 bp TCAGTCTCCACGAACCAGCGTCGCAGCATGGACTGTGTGTGCTCGTaGTTCAGCTCGGGGCTGGCTCGGAGTATCTCCTGCTTCACCTGG +
Preference number: 5 (lower is better)
Translates to: SVSTNQRRSMDCVCS*FSSGLARSISCFTW
Trigger: CCAGGTGAAGCAGGAGATACTCCGAGCCAGCCCCGAGCTGAACCACGAGCACACACAGTCCATGCTGCGACGCTGGTTCGTGGAGACTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CAA 90 bp TCAGGCAGTAGGGCACTCAGTACCCTGTGGGTGGCCAATCTGCAGGAGGCACGGTCCTCATCAGAGGAGTaGTCATCCAGGGAGCCCAGG +
Preference number: 5 (lower is better)
Translates to: SGSRALSTLWVANLQEARSSSEE*SSREPR
Trigger: CCTGGGCTCCCTGGATGACAACTCCTCTGATGAGGA...CCGTGCCTCCTGCAGATTGGCCACCCACAGGGTACTGAGTGCCCTACTGCCTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CAA 90 bp CCTGGTTCAGTTGGCCTCAGAGAGGCAGTGGCAGAATTATCCACTGGGACAAACGGCACGGCCATCCGGTaGGGGTGGGAAGAGGGCAGC +
Preference number: 5 (lower is better)
Translates to: PGSVGLREAVAELSTGTNGTAIR*GWEEGS
Trigger: GCTGCCCTCTTCCCACCCCAACCGGATGGCCGTGCC...GTTTGTCCCAGTGGATAATTCTGCCACTGCCTCTCTGAGGCCAACTGAACCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CAA 90 bp TCAGGCAGTAGGGCACTCAGTACCCTGTGGGTGGCCAATCTGCAGGAGGCACGGACGTGGGAGACCCCGTaGGTATGCATGATCTGCACG +
Preference number: 5 (lower is better)
Translates to: SGSRALSTLWVANLQEARTWETP*VCMICT
Trigger: CGTGCAGATCATGCATACCAACGGGGTCTCCCACGT...CCGTGCCTCCTGCAGATTGGCCACCCACAGGGTACTGAGTGCCCTACTGCCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CAA 90 bp TCTTTCAGCAGCCTCTTCAGCGCACCCAAGTGGTCAGGGTGGCAGCCAGTGTCGAGGTCCCCTTCAGAGTaGGGTGAGGCCTGCCTGCAA +
Preference number: 5 (lower is better)
Translates to: SFSSLFSAPKWSGWQPVSRSPSE*GEACLQ
Trigger: TTGCAGGCAGGCCTCACCCAACTCTGAAGGGGACCT...CGACACTGGCTGCCACCCTGACCACTTGGGTGCGCTGAAGAGGCTGCTGAAAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS TCA 90 bp CCACATCCTTCACACAGCCCTGCTCGTAAACGTCTTCGGGGACACTaGTGCATTTGCCCTGGTGCCGGCTGTCCTCCGTCCACTCCACTG +
Preference number: 5 (lower is better)
Translates to: PHPSHSPARKRLRGH*CICPGAGCPPSTPL
Trigger: CAGTGGAGTGGACGGAGGACAGCCGGCACCAGGGCAAATGCATCAGTGTCCCCGAAGACGTTTACGAGCAGGGCTGTGTGAAGGATGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS TCA 90 bp CGCTGCGGTATCTCTGGACCAGCTGCACGATGCTCTGTGTGTTCATaGAGAAGACCTCTCGGTCCGCCTTACGCTGCAGGGTGGCGGCAT +
Preference number: 5 (lower is better)
Translates to: RCGISGPAARCSVCS*RRPLGPPYAAGWRH
Trigger: ATGCCGCCACCCTGCAGCGTAAGGCGGACCGAGAGGTCTTCTTCATGAACACACAGAGCATCGTGCAGCTGGTCCAGAGATACCGCAGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS TCA 90 bp TCTGCTCAGCTGCGTGAGCTCACAGAGGATGGAGGTCAGCTCGTCTaGCAGGGTGGGGTCTGGGCCGCACAGCTCATCTATCAGCATGGT +
Preference number: 5 (lower is better)
Translates to: SAQLRELTEDGGQLV*QGGVWAAQLIYQHG
Trigger: ACCATGCTGATAGATGAGCTGTGCGGCCCAGACCCCACCCTGTCAGACGAGCTGACCTCCATCCTCTGTGAGCTCACGCAGCTGAGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS GCA 90 bp ATGTTCGAAATGGCCTCTTCACGGTTCTCGCCCCAGGAGAAGCAGTaGCCAAACTGGGAATCGGCGAACTCGTGCAAGCCCCCAGCAGCG +
Preference number: 5 (lower is better)
Translates to: MFEMASSRFSPQEKQ*PNWESANSCKPPAA
Trigger: CGCTGCTGGGGGCTTGCACGAGTTCGCCGATTCCCAGTTTGGGCACTGCTTCTCCTGGGGCGAGAACCGTGAAGAGGCCATTTCGAACAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS GCA 90 bp TGTCTGGCTCTGAGGGCAACCTTGCAGTGCTCGCTTCTGCTCAGCTaGGTGAGCTCACAGAGGATGGAGGTCAGCTCGTCTGACAGGGTG +
Preference number: 5 (lower is better)
Translates to: CLALRATLQCSLLLS*VSSQRMEVSSSDRV
Trigger: CACCCTGTCAGACGAGCTGACCTCCATCCTCTGTGAGCTCACGCAGCTGAGCAGAAGCGAGCACTGCAAGGTTGCCCTCAGAGCCAGACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS GCA 90 bp TGGCACAGTGGGGAGAAGCCACTGTCCATGAAGAGTTCTGTGCTGTaGCTCAGCAGGTCGGGGTTGGAGACACTGATGGGCACGGCCATC +
Preference number: 5 (lower is better)
Translates to: WHSGEKPLSMKSSVL*LSRSGLETLMGTAI
Trigger: GATGGCCGTGCCCATCAGTGTCTCCAACCCCGACCTGCTGAGGCACAGCACAGAACTCTTCATGGACAGTGGCTTCTCCCCACTGTGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS GCA 90 bp ATGTTTTCACGGATGGTGGAGCGCAAGCCGTCCTTGGCTGACCAGTaGTGTTCCAGCCACTGGACCACCACCTGGTTGCTGTCCCACAGG +
Preference number: 5 (lower is better)
Translates to: MFSRMVERKPSLADQ*CSSHWTTTWLLSHR
Trigger: CCTGTGGGACAGCAACCAGGTGGTGGTCCAGTGGCTGGAACAGCACTGGTCAGCCAAGGACGGCTTGCGCTCCACCATCCGTGAAAACAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS CCA 90 bp CGGCTGTCCAGTTGGTTTGGAGTTCTGGGGAGGGCCAGGTGTCATTaGAAGACAGTGGGTTCCTCGGAGGCCTCTGGCATGAGCTTGGCA +
Preference number: 5 (lower is better)
Translates to: RLSSWFGVLGRARCH*KTVGSSEASGMSLA
Trigger: TGCCAAGCTCATGCCAGAGGCCTCCGAGGAACCCACTGTCTTCCAATGACACCTGGCCCTCCCCAGAACTCCAAACCAACTGGACAGCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS CCA 90 bp TTAGCATCTGGAACCTCTGGGCCCGGGGCGGCTGTCCAGTTGGTTTaGAGTTCTGGGGAGGGCCAGGTGTCATTGGAAGACAGTGGGTTC +
Preference number: 5 (lower is better)
Translates to: LASGTSGPGAAVQLV*SSGEGQVSLEDSGF
Trigger: GAACCCACTGTCTTCCAATGACACCTGGCCCTCCCCAGAACTCCAAACCAACTGGACAGCCGCCCCGGGCCCAGAGGTTCCAGATGCTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS CCA 90 bp GTTCAGCTCCTGCACTGTCCCCGAGCTTGGCTTAAAGCCCTCATCTaGGTTTTCGCTGGTGATCCTGGCTGCAATGACGTGGCCTCGGGC +
Preference number: 5 (lower is better)
Translates to: VQLLHCPRAWLKALI*VFAGDPGCNDVASG
Trigger: GCCCGAGGCCACGTCATTGCAGCCAGGATCACCAGCGAAAACCCAGATGAGGGCTTTAAGCCAAGCTCGGGGACAGTGCAGGAGCTGAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS CCA 90 bp TCCAGAATGGTGCAGACCCCCTCGAAGTCATCTGGCACGGTGACGTaGGAGACCCCGTTGGTATGCATGATCTGCACGCCACCTAGCTGG +
Preference number: 5 (lower is better)
Translates to: SRMVQTPSKSSGTVT*ETPLVCMICTPPSW
Trigger: CCAGCTAGGTGGCGTGCAGATCATGCATACCAACGGGGTCTCCCACGTCACCGTGCCAGATGACTTCGAGGGGGTCTGCACCATTCTGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CAA 90 bp GCTGCGGTGCCTGGCAGTGCTGGGAAAGTCTCTGTAAGCGGATCCAGAGTGTTCGCCTCTGGCATGAGCTaGGCAGGGAGTTCCTCTGCT +
Preference number: 5 (lower is better)
Translates to: AAVPGSAGKVSVSGSRVFASGMS*AGSSSA
Trigger: AGCAGAGGAACTCCCTGCCAAGCTCATGCCAGAGGC...GAACACTCTGGATCCGCTTACAGAGACTTTCCCAGCACTGCCAGGCACCGCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CAA 90 bp TTTGCAGCTCTTTCAGCAGCCTCTTCAGCGCACCCAAGTGGTCAGGGTGGCAGCGGCTGTCCAGTTGGTTaGGAGTTCTGGGGAGGGCCA +
Preference number: 5 (lower is better)
Translates to: FAALSAASSAHPSGQGGSGCPVG*EFWGGP
Trigger: TGGCCCTCCCCAGAACTCCAAACCAACTGGACAGCC...GCTGCCACCCTGACCACTTGGGTGCGCTGAAGAGGCTGCTGAAAGAGCTGCAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CAA 90 bp TCTTTCAGCAGCCTCTTCAGCGCACCCAAGTGGTCAGGGTGGCAGCCAGTGTCGTCCTCATCAGAGGAGTaGTCATCCAGGGAGCCCAGG +
Preference number: 5 (lower is better)
Translates to: SFSSLFSAPKWSGWQPVSSSSEE*SSREPR
Trigger: CCTGGGCTCCCTGGATGACAACTCCTCTGATGAGGA...CGACACTGGCTGCCACCCTGACCACTTGGGTGCGCTGAAGAGGCTGCTGAAAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CAA 90 bp TCAGGCAGTAGGGCACTCAGTACCCTGTGGGTGGCCAATCTGCAGGAGGCACGGGGGCCGCGTGCACTTTaGAAGGGTCATCGAGTTCTA +
Preference number: 5 (lower is better)
Translates to: SGSRALSTLWVANLQEARGPRAL*KGHRVL
Trigger: TAGAACTCGATGACCCTTCAAAAGTGCACGCGGCCC...CCGTGCCTCCTGCAGATTGGCCACCCACAGGGTACTGAGTGCCCTACTGCCTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CAA 90 bp CTCTTCAGCGCACCCAAGTGGTCAGGGTGGCAGCCAGTGTCGGTCTGGGCTTTCTCCTCTCGGAGGCTCTaGCTGTCTTCCTCTGAGTAC +
Preference number: 5 (lower is better)
Translates to: LFSAPKWSGWQPVSVWAFSSRRL*LSSSEY
Trigger: GTACTCAGAGGAAGACAGCAAGAGCCTCCGAGAGGA...GAAAGCCCAGACCGACACTGGCTGCCACCCTGACCACTTGGGTGCGCTGAAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CAA 90 bp AATTATCCACTGGGACAAACCCTGAAGTCCCCAGGTGAGGAGAGGCTGGGCCCGCGCACACTGGTGTTGTaGAACGCCACCTCCAGCTCG +
Preference number: 5 (lower is better)
Translates to: NYPLGQTLKSPGEERLGPRTLVL*NATSSS
Trigger: CGAGCTGGAGGTGGCGTTCAACAACACCAGTGTGCG...CGGGCCCAGCCTCTCCTCACCTGGGGACTTCAGGGTTTGTCCCAGTGGATAATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CAA 90 bp TCTTTCAGCAGCCTCTTCAGCGCACCCAAGTGGTCAGGGTGGCAGCCAGTGTCGCTCCACCAGCTGACCTaGAGAGTCCAACACCAGCTC +
Preference number: 5 (lower is better)
Translates to: SFSSLFSAPKWSGWQPVSLHQLT*RVQHQL
Trigger: GAGCTGGTGTTGGACTCTCAAGGTCAGCTGGTGGAG...CGACACTGGCTGCCACCCTGACCACTTGGGTGCGCTGAAGAGGCTGCTGAAAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CAA 90 bp CTCTTCAGCGCACCCAAGTGGTCAGGGTGGCAGCCAGTGTCGGTCTGGGCTTTCTTCTCCACACCCAGGTaGGCATCCTTCCCGATGACA +
Preference number: 5 (lower is better)
Translates to: LFSAPKWSGWQPVSVWAFFSTPR*ASFPMT
Trigger: TGTCATCGGGAAGGATGCCAACCTGGGTGTGGAGAA...GAAAGCCCAGACCGACACTGGCTGCCACCCTGACCACTTGGGTGCGCTGAAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CAA 90 bp TCTTTCAGCAGCCTCTTCAGCGCACCCAAGTGGTCAGGGTGGCAGCCAGTGTCGACGTGGGAGACCCCGTaGGTATGCATGATCTGCACG +
Preference number: 5 (lower is better)
Translates to: SFSSLFSAPKWSGWQPVSTWETP*VCMICT
Trigger: CGTGCAGATCATGCATACCAACGGGGTCTCCCACGT...CGACACTGGCTGCCACCCTGACCACTTGGGTGCGCTGAAGAGGCTGCTGAAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS GCA 90 bp TCCTCCTGGGACAGGGACGTACTGATCGGCCATCTTGATGTACTCTaGGTTGGCCTTCAGATCCTCGGGCGTCACCATGACCACGAACCG +
Preference number: 5 (lower is better)
Translates to: SSWDRDVLIGHLDVL*VGLQILGRHHDHEP
Trigger: CGGTTCGTGGTCATGGTGACGCCCGAGGATCTGAAGGCCAACGCAGAGTACATCAAGATGGCCGATCAGTACGTCCCTGTCCCAGGAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
ENSMUST00000146841.2
CDS GCA 90 bp GTGAGACCGCTTCCACTCCAGGGTAAGGTTGGGATTTGCAGTGTCTaGGCTACGATGGTGGAGGCGATCTTGTCTCCCAGGGCCCACATG +
Preference number: 5 (lower is better)
Translates to: VRPLPLQGKVGICSV*ATMVEAILSPRAHM
Trigger: CATGTGGGCCCTGGGAGACAAGATCGCCTCCACCATCGTAGCGCAGACACTGCAAATCCCAACCTTACCCTGGAGTGGAAGCGGTCTCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS GCA 90 bp ATGTCCTTCAGTCGGTGCAGGGGCACGCCCATGGCGATCTGCAACTaGGCAGCAGGCAGGTTGACATCTGCGATCATTTCAGTGCACGGA +
Preference number: 5 (lower is better)
Translates to: MSFSRCRGTPMAICN*AAGRLTSAIISVHG
Trigger: TCCGTGCACTGAAATGATCGCAGATGTCAACCTGCCTGCTGCGCAGTTGCAGATCGCCATGGGCGTGCCCCTGCACCGACTGAAGGACAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS GCA 90 bp AGCCGTATGTCCTTCAGTCGGTGCAGGGGCACGCCCATGGCGATCTaGAACTGCGCAGCAGGCAGGTTGACATCTGCGATCATTTCAGTG +
Preference number: 5 (lower is better)
Translates to: SRMSFSRCRGTPMAI*NCAAGRLTSAIISV
Trigger: CACTGAAATGATCGCAGATGTCAACCTGCCTGCTGCGCAGTTGCAGATCGCCATGGGCGTGCCCCTGCACCGACTGAAGGACATACGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS GCA 90 bp GCTTGGCTTAAAGCCCTCATCTGGGTTTTCGCTGGTGATCCTGGCTaGAATGACGTGGCCTCGGGCAATGGGAGGGCTCAAGGGGGTTTC +
Preference number: 5 (lower is better)
Translates to: AWLKALIWVFAGDPG*NDVASGNGRAQGGF
Trigger: GAAACCCCCTTGAGCCCTCCCATTGCCCGAGGCCACGTCATTGCAGCCAGGATCACCAGCGAAAACCCAGATGAGGGCTTTAAGCCAAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS GCA 90 bp ATGCTCTGTGTGTTCATGAAGAAGACCTCTCGGTCCGCCTTACGCTaGAGGGTGGCGGCATGGCAGTCCAGGATGGTGGCTATCTGCTGG +
Preference number: 5 (lower is better)
Translates to: MLCVFMKKTSRSALR*RVAAWQSRMVAICW
Trigger: CCAGCAGATAGCCACCATCCTGGACTGCCATGCCGCCACCCTGCAGCGTAAGGCGGACCGAGAGGTCTTCTTCATGAACACACAGAGCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS CCA 90 bp GTGGGGTCTGGGCCGCACAGCTCATCTATCAGCATGGTCACCAGCTaGTTCTTCTTGGCCACCTGGGAGTGTGAGAAGATGCAGTCCAGC +
Preference number: 5 (lower is better)
Translates to: VGSGPHSSSISMVTS*FFLATWECEKMQSS
Trigger: GCTGGACTGCATCTTCTCACACTCCCAGGTGGCCAAGAAGAACCAGCTGGTGACCATGCTGATAGATGAGCTGTGCGGCCCAGACCCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS CCA 90 bp TGTACAAAGGCACGGAAGACTGGCACCAGCGCCTCGTCCTCCATGTaGTCGGCACACTGGATGGCCACATTCAGGATGTGGATGGGTTCC +
Preference number: 5 (lower is better)
Translates to: CTKARKTGTSASSSM*SAHWMATFRMWMGS
Trigger: GGAACCCATCCACATCCTGAATGTGGCCATCCAGTGTGCCGACCACATGGAGGACGAGGCGCTGGTGCCAGTCTTCCGTGCCTTTGTACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CAA 90 bp CTCTTCAGCGCACCCAAGTGGTCAGGGTGGCAGCCAGTGTCGGTCTGGGCTTTCGTCATCAGCTGTCTCTaGATGTGTGCCTGCTTCCTG +
Preference number: 5 (lower is better)
Translates to: LFSAPKWSGWQPVSVWAFVISCL*MCACFL
Trigger: CAGGAAGCAGGCACACATCAAGAGACAGCTGATGAC...GAAAGCCCAGACCGACACTGGCTGCCACCCTGACCACTTGGGTGCGCTGAAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CAA 90 bp TCTTTCAGCAGCCTCTTCAGCGCACCCAAGTGGTCAGGGTGGCAGCCAGTGTCGAGCAGCTCTGGAAGTTaGGGGTTTTCCGAAGCGTGG +
Preference number: 5 (lower is better)
Translates to: SFSSLFSAPKWSGWQPVSSSSGS*GFSEAW
Trigger: CCACGCTTCGGAAAACCCCAAACTTCCAGAGCTGCT...CGACACTGGCTGCCACCCTGACCACTTGGGTGCGCTGAAGAGGCTGCTGAAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CAA 90 bp TCTTTCAGCAGCCTCTTCAGCGCACCCAAGTGGTCAGGGTGGCAGCCAGTGTCGCACTCCAGGGTAAGGTaGGGATTTGCAGTGTCTGCG +
Preference number: 5 (lower is better)
Translates to: SFSSLFSAPKWSGWQPVSHSRVR*GFAVSA
Trigger: CGCAGACACTGCAAATCCCAACCTTACCCTGGAGTG...CGACACTGGCTGCCACCCTGACCACTTGGGTGCGCTGAAGAGGCTGCTGAAAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CAA 90 bp AATTATCCACTGGGACAAACCCTGAAGTCCCCAGGTGAGGAGAGGCTGGGCCCGCCCCACACGTTCTTGTaGCTGCGGAAGTTCAGCTCC +
Preference number: 5 (lower is better)
Translates to: NYPLGQTLKSPGEERLGPPHTFL*LRKFSS
Trigger: GGAGCTGAACTTCCGCAGCAACAAGAACGTGTGGGG...CGGGCCCAGCCTCTCCTCACCTGGGGACTTCAGGGTTTGTCCCAGTGGATAATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CAA 90 bp TCTCATTCGGGTCCTGATGCTGCGGTGCCTGGCAGTGCTGGGAAAGTCTCTGTAATAACCCCTGGCCGCTaGATGTACTTCACCCGGCCG +
Preference number: 5 (lower is better)
Translates to: SHSGPDAAVPGSAGKVSVITPGR*MYFTRP
Trigger: CGGCCGGGTGAAGTACATCAAGCGGCCAGGGGTTAT...TACAGAGACTTTCCCAGCACTGCCAGGCACCGCAGCATCAGGACCCGAATGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CAA 90 bp GCTGCGGTGCCTGGCAGTGCTGGGAAAGTCTCTGTAAGCGGATCCAGAGTGTTCTGGGTCATGTCCGGCTaGAACTGCTCCCTCAGGTTG +
Preference number: 5 (lower is better)
Translates to: AAVPGSAGKVSVSGSRVFWVMSG*NCSLRL
Trigger: CAACCTGAGGGAGCAGTTCAAGCCGGACATGACCCA...GAACACTCTGGATCCGCTTACAGAGACTTTCCCAGCACTGCCAGGCACCGCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CAA 90 bp CAGCAGCCTCTTCAGCGCACCCAAGTGGTCAGGGTGGCAGCCAGTGTCGGTCTGACAAGGATGTGCTTCTaGGACTGTACAAAGGCACGG +
Preference number: 5 (lower is better)
Translates to: QQPLQRTQVVRVAASVGLTRMCF*DCTKAR
Trigger: CCGTGCCTTTGTACAGTCCAAGAAGCACATCCTTGT...CAGACCGACACTGGCTGCCACCCTGACCACTTGGGTGCGCTGAAGAGGCTGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CAA 90 bp GGTCAGGGTGGCAGCCAGTGTCGGTCTGGGCTTTCCTCCACATCAAGAGGACCTTCGAAGGAGGCTTCCTaGGTGATCAGGTCTGAGTGC +
Preference number: 5 (lower is better)
Translates to: GQGGSQCRSGLSSTSRGPSKEAS*VIRSEC
Trigger: GCACTCAGACCTGATCACCAAGGAAGCCTCCTTCGA...AGGTCCTCTTGATGTGGAGGAAAGCCCAGACCGACACTGGCTGCCACCCTGACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CAA 90 bp GAGCCTGGGAACCGAGGCAGTAACTCTCCTCCAGCCATGCTGAATGCTAGGTGTCGCACACTGGTGTTGTaGAACGCCACCTCCAGCTCG +
Preference number: 5 (lower is better)
Translates to: EPGNRGSNSPPAMLNARCRTLVL*NATSSS
Trigger: CGAGCTGGAGGTGGCGTTCAACAACACCAGTGTGCG...ACACCTAGCATTCAGCATGGCTGGAGGAGAGTTACTGCCTCGGTTCCCAGGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CAA 90 bp TCTCATTCGGGTCCTGATGCTGCGGTGCCTGGCAGTGCTGGGAAAGTCTCTGTAGTGCGCACACTGGTGTaGTTGAACGCCACCTCCAGC +
Preference number: 5 (lower is better)
Translates to: SHSGPDAAVPGSAGKVSVVRTLV*LNATSS
Trigger: GCTGGAGGTGGCGTTCAACAACACCAGTGTGCGCAC...TACAGAGACTTTCCCAGCACTGCCAGGCACCGCAGCATCAGGACCCGAATGAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CAA 90 bp CTCTTCAGCGCACCCAAGTGGTCAGGGTGGCAGCCAGTGTCGGTCTGGGCTTTCGTCTTGAACCTCATTTaGAAGGCCACCATGCCCACC +
Preference number: 5 (lower is better)
Translates to: LFSAPKWSGWQPVSVWAFVLNLI*KATMPT
Trigger: GGTGGGCATGGTGGCCTTCAAAATGAGGTTCAAGAC...GAAAGCCCAGACCGACACTGGCTGCCACCCTGACCACTTGGGTGCGCTGAAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CAA 90 bp GGTCAGGGTGGCAGCCAGTGTCGGTCTGGGCTTTCCTCCACATCAAGAGGACCTGATCTGGGTGTAGTCTaGGGGCGTCAGGTACAGGTA +
Preference number: 5 (lower is better)
Translates to: GQGGSQCRSGLSSTSRGPDLGVV*GRQVQV
Trigger: TACCTGTACCTGACGCCCCAAGACTACACCCAGATC...AGGTCCTCTTGATGTGGAGGAAAGCCCAGACCGACACTGGCTGCCACCCTGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CAA 90 bp TCTCATTCGGGTCCTGATGCTGCGGTGCCTGGCAGTGCTGGGAAAGTCTCTGTATCTCTTCCCAGGACCTaGTTGAGAGCACCGGCTCCG +
Preference number: 5 (lower is better)
Translates to: SHSGPDAAVPGSAGKVSVSLPRT*LRAPAP
Trigger: CGGAGCCGGTGCTCTCAACAAGGTCCTGGGAAGAGA...TACAGAGACTTTCCCAGCACTGCCAGGCACCGCAGCATCAGGACCCGAATGAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CAA 90 bp AATTATCCACTGGGACAAACCCTGAAGTCCCCAGGTGAGGAGAGGCTGGGCCCGAGAGGCAGGCGCTCCTaGTTGAAGTCCCTGATGACC +
Preference number: 5 (lower is better)
Translates to: NYPLGQTLKSPGEERLGPRGRRS*LKSLMT
Trigger: GGTCATCAGGGACTTCAACAAGGAGCGCCTGCCTCT...CGGGCCCAGCCTCTCCTCACCTGGGGACTTCAGGGTTTGTCCCAGTGGATAATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS GCA 90 bp GAGCCCAGGATAAAGCTGGTCATCAGCTGTCTCTTGATGTGTGCCTaGTTCCTGTCCTCTCTGGAGGGGGATACTGTCCTCTGGCTCGGG +
Preference number: 5 (lower is better)
Translates to: EPRIKLVISCLLMCA*FLSSLEGDTVLWLG
Trigger: CCCGAGCCAGAGGACAGTATCCCCCTCCAGAGAGGACAGGAAGCAGGCACACATCAAGAGACAGCTGATGACCAGCTTTATCCTGGGCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS GCA 90 bp CACTCCACTGTGAGACCGCTTCCACTCCAGGGTAAGGTTGGGATTTaGAGTGTCTGCGCTACGATGGTGGAGGCGATCTTGTCTCCCAGG +
Preference number: 5 (lower is better)
Translates to: HSTVRPLPLQGKVGI*SVCATMVEAILSPR
Trigger: CCTGGGAGACAAGATCGCCTCCACCATCGTAGCGCAGACACTGCAAATCCCAACCTTACCCTGGAGTGGAAGCGGTCTCACAGTGGAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS GCA 90 bp CGGAATCTCACTCTGCACTTGTCGGAAAAGCATCGGGAAGTCCTCTaGACTCTCAGCCTTGCGGATACCTTTCCCGCCTCCGCCTTCGGA +
Preference number: 5 (lower is better)
Translates to: RNLTLHLSEKHREVL*TLSLADTFPASAFG
Trigger: TCCGAAGGCGGAGGCGGGAAAGGTATCCGCAAGGCTGAGAGTGCAGAGGACTTCCCGATGCTTTTCCGACAAGTGCAGAGTGAGATTCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS GCA 90 bp AATGATTCCTTTCTCCAGCATGTGGCCCGGGGTGTCGTGCAGGTCTaGGAACTGCACTGCCACCTGGTGGTAGATGGGAAGCAGCAGTTC +
Preference number: 5 (lower is better)
Translates to: NDSFLQHVARGVVQV*ELHCHLVVDGKQQF
Trigger: GAACTGCTGCTTCCCATCTACCACCAGGTGGCAGTGCAGTTCGCAGACCTGCACGACACCCCGGGCCACATGCTGGAGAAAGGAATCATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS CCA 90 bp GGCCGCACAGCTCATCTATCAGCATGGTCACCAGCTGGTTCTTCTTaGCCACCTGGGAGTGTGAGAAGATGCAGTCCAGCACCTGGGTCA +
Preference number: 5 (lower is better)
Translates to: GRTAHLSAWSPAGSS*PPGSVRRCSPAPGS
Trigger: TGACCCAGGTGCTGGACTGCATCTTCTCACACTCCCAGGTGGCCAAGAAGAACCAGCTGGTGACCATGCTGATAGATGAGCTGTGCGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS CCA 90 bp TTCAAATCTCCTGAAGGCCACCATGGCCCCCATCCGCTGGCACAGTaGGGAGAAGCCACTGTCCATGAAGAGTTCTGTGCTGTGCCTCAG +
Preference number: 5 (lower is better)
Translates to: FKSPEGHHGPHPLAQ*GEATVHEEFCAVPQ
Trigger: CTGAGGCACAGCACAGAACTCTTCATGGACAGTGGCTTCTCCCCACTGTGCCAGCGGATGGGGGCCATGGTGGCCTTCAGGAGATTTGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS CCA 90 bp ATCCACAAGGATGTGCTTCTTGGACTGTACAAAGGCACGGAAGACTaGCACCAGCGCCTCGTCCTCCATGTGGTCGGCACACTGGATGGC +
Preference number: 5 (lower is better)
Translates to: IHKDVLLGLYKGTED*HQRLVLHVVGTLDG
Trigger: GCCATCCAGTGTGCCGACCACATGGAGGACGAGGCGCTGGTGCCAGTCTTCCGTGCCTTTGTACAGTCCAAGAAGCACATCCTTGTGGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CAA 90 bp CAAGGAACTCGGTGTGCCTGGTTCAGTTGGCCTCAGAGAGGCAGTGGCAGAATTGGCTGTCCAGTTGGTTaGGAGTTCTGGGGAGGGCCA +
Preference number: 5 (lower is better)
Translates to: QGTRCAWFSWPQRGSGRIGCPVG*EFWGGP
Trigger: TGGCCCTCCCCAGAACTCCAAACCAACTGGACAGCC...AATTCTGCCACTGCCTCTCTGAGGCCAACTGAACCAGGCACACCGAGTTCCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CAA 90 bp GGTCAGGGTGGCAGCCAGTGTCGGTCTGGGCTTTCCTCCACATCAAGAGGACCTTGCAGGTCCAGTTTCTaGTGTTCTCGGCCTCTCTTC +
Preference number: 5 (lower is better)
Translates to: GQGGSQCRSGLSSTSRGPCRSSF*CSRPLF
Trigger: GAAGAGAGGCCGAGAACACAAGAAACTGGACCTGCA...AGGTCCTCTTGATGTGGAGGAAAGCCCAGACCGACACTGGCTGCCACCCTGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CAA 90 bp TTTGCAGCTCTTTCAGCAGCCTCTTCAGCGCACCCAAGTGGTCAGGGTGGCAGCAGCAGCTCTGGAAGTTaGGGGTTTTCCGAAGCGTGG +
Preference number: 5 (lower is better)
Translates to: FAALSAASSAHPSGQGGSSSSGS*GFSEAW
Trigger: CCACGCTTCGGAAAACCCCAAACTTCCAGAGCTGCT...GCTGCCACCCTGACCACTTGGGTGCGCTGAAGAGGCTGCTGAAAGAGCTGCAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CAA 90 bp TCAGGCAGTAGGGCACTCAGTACCCTGTGGGTGGCCAATCTGCAGGAGGCACGGCCGCCTTCGGAGGCTTaGATCATCAAAGGAAATCCT +
Preference number: 5 (lower is better)
Translates to: SGSRALSTLWVANLQEARPPSEA*IIKGNP
Trigger: AGGATTTCCTTTGATGATCAAAGCCTCCGAAGGCGG...CCGTGCCTCCTGCAGATTGGCCACCCACAGGGTACTGAGTGCCCTACTGCCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CAA 90 bp GATCAGACACCGGATCCCCACCTCAGGCAAAAACCACAAGGAACTCGGTGTGCCTCTGCACTCTCAGCCTaGCGGATACCTTTCCCGCCT +
Preference number: 5 (lower is better)
Translates to: DQTPDPHLRQKPQGTRCASALSA*RIPFPP
Trigger: AGGCGGGAAAGGTATCCGCAAGGCTGAGAGTGCAGA...GGCACACCGAGTTCCTTGTGGTTTTTGCCTGAGGTGGGGATCCGGTGTCTGATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CAA 90 bp TCTCATTCGGGTCCTGATGCTGCGGTGCCTGGCAGTGCTGGGAAAGTCTCTGTATCTGCACTCTCAGCCTaGCGGATACCTTTCCCGCCT +
Preference number: 5 (lower is better)
Translates to: SHSGPDAAVPGSAGKVSVSALSA*RIPFPP
Trigger: AGGCGGGAAAGGTATCCGCAAGGCTGAGAGTGCAGA...TACAGAGACTTTCCCAGCACTGCCAGGCACCGCAGCATCAGGACCCGAATGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CAA 90 bp AATTATCCACTGGGACAAACCCTGAAGTCCCCAGGTGAGGAGAGGCTGGGCCCGTCGAAGGAGGCTTCCTaGGTGATCAGGTCTGAGTGC +
Preference number: 5 (lower is better)
Translates to: NYPLGQTLKSPGEERLGPSKEAS*VIRSEC
Trigger: GCACTCAGACCTGATCACCAAGGAAGCCTCCTTCGA...CGGGCCCAGCCTCTCCTCACCTGGGGACTTCAGGGTTTGTCCCAGTGGATAATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CAA 90 bp GGTCAGGGTGGCAGCCAGTGTCGGTCTGGGCTTTCCTCCACATCAAGAGGACCTGTCTTGAACCTCATTTaGAAGGCCACCATGCCCACC +
Preference number: 5 (lower is better)
Translates to: GQGGSQCRSGLSSTSRGPVLNLI*KATMPT
Trigger: GGTGGGCATGGTGGCCTTCAAAATGAGGTTCAAGAC...AGGTCCTCTTGATGTGGAGGAAAGCCCAGACCGACACTGGCTGCCACCCTGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CAA 90 bp CAAGGAACTCGGTGTGCCTGGTTCAGTTGGCCTCAGAGAGGCAGTGGCAGAATTAGGTCCCCTTCAGAGTaGGGTGAGGCCTGCCTGCAA +
Preference number: 5 (lower is better)
Translates to: QGTRCAWFSWPQRGSGRIRSPSE*GEACLQ
Trigger: TTGCAGGCAGGCCTCACCCAACTCTGAAGGGGACCT...AATTCTGCCACTGCCTCTCTGAGGCCAACTGAACCAGGCACACCGAGTTCCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CAA 90 bp TCTTTCAGCAGCCTCTTCAGCGCACCCAAGTGGTCAGGGTGGCAGCCAGTGTCGGCCTGCTGGATGATCTaGGCCTCAGAATCCAAGTTG +
Preference number: 5 (lower is better)
Translates to: SFSSLFSAPKWSGWQPVSACWMI*ASESKL
Trigger: CAACTTGGATTCTGAGGCCAAGATCATCCAGCAGGC...CGACACTGGCTGCCACCCTGACCACTTGGGTGCGCTGAAGAGGCTGCTGAAAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CAA 90 bp CAGCAGCCTCTTCAGCGCACCCAAGTGGTCAGGGTGGCAGCCAGTGTCGGTCTGTTCTTGGACCAGACTTaGGATGGTCTTGAGGACAGA +
Preference number: 5 (lower is better)
Translates to: QQPLQRTQVVRVAASVGLFLDQT*DGLEDR
Trigger: TCTGTCCTCAAGACCATCCAAAGTCTGGTCCAAGAA...CAGACCGACACTGGCTGCCACCCTGACCACTTGGGTGCGCTGAAGAGGCTGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS TCA 90 bp GATCTTCTGGTGCCGCCTCTGAATGGAACAGTCCCGTCCGAACAGTaGCACCGCGTTTCCATACTGATCTGCCAAGACCTGGACCTCCAG +
Preference number: 5 (lower is better)
Translates to: DLLVPPLNGTVPSEQ*HRVSILICQDLDLQ
Trigger: CTGGAGGTCCAGGTCTTGGCAGATCAGTATGGAAACGCGGTGTCACTGTTCGGACGGGACTGTTCCATTCAGAGGCGGCACCAGAAGATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS GCA 90 bp CAGGGAGTGCAAGAATTCCGTCATGCAGGTTCTGAACATCGCGTCTaGCACATTCAAGGCCCCACACACCACCCCAAGCATGATGTCCGG +
Preference number: 5 (lower is better)
Translates to: QGVQEFRHAGSEHRV*HIQGPTHHPKHDVR
Trigger: CCGGACATCATGCTTGGGGTGGTGTGTGGGGCCTTGAATGTGGCAGACGCGATGTTCAGAACCTGCATGACGGAATTCTTGCACTCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS GCA 90 bp CATGCTGATGGTGACCGTTTTCTCATAAGCCAGGGAAGCTTCTCCTaGAATCATGCCCGAGCCCCTCAGGTTCTCCACACCCAGGTTGGC +
Preference number: 5 (lower is better)
Translates to: HADGDRFLISQGSFS*NHARAPQVLHTQVG
Trigger: GCCAACCTGGGTGTGGAGAACCTGAGGGGCTCGGGCATGATTGCAGGAGAAGCTTCCCTGGCTTATGAGAAAACGGTCACCATCAGCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS CCA 90 bp CCACTCATGACATTGGTCAGATTTTCCAAGACGCCGTGGAACACTTaGTGTAGCTTCTCCCCGAGGATGGGCAGAGTCTGCTGGGCAGGG +
Preference number: 5 (lower is better)
Translates to: PLMTLVRFSKTPWNT*CSFSPRMGRVCWAG
Trigger: CCCTGCCCAGCAGACTCTGCCCATCCTCGGGGAGAAGCTACACCAAGTGTTCCACGGCGTCTTGGAAAATCTGACCAATGTCATGAGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS CCA 90 bp AGCTCATCTATCAGCATGGTCACCAGCTGGTTCTTCTTGGCCACCTaGGAGTGTGAGAAGATGCAGTCCAGCACCTGGGTCATGTCCGGC +
Preference number: 5 (lower is better)
Translates to: SSSISMVTSWFFLAT*ECEKMQSSTWVMSG
Trigger: GCCGGACATGACCCAGGTGCTGGACTGCATCTTCTCACACTCCCAGGTGGCCAAGAAGAACCAGCTGGTGACCATGCTGATAGATGAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS CCA 90 bp AGGCCTGCCTGCAAGCATCCACCTGGGGTCGTAGGGAGCTTTGGTTaGGGTGAATTCAATTTCCCTGTCGATGGGGTCAGAAGGAGTGGT +
Preference number: 5 (lower is better)
Translates to: RPACKHPPGVVGSFG*GEFNFPVDGVRRSG
Trigger: ACCACTCCTTCTGACCCCATCGACAGGGAAATTGAATTCACCCCAACCAAAGCTCCCTACGACCCCAGGTGGATGCTTGCAGGCAGGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS CCA 90 bp GTCTTCCATTCCAGCACATCAGAAATGATTCCTTTCTCCAGCATGTaGCCCGGGGTGTCGTGCAGGTCTGCGAACTGCACTGCCACCTGG +
Preference number: 5 (lower is better)
Translates to: VFHSSTSEMIPFSSM*PGVSCRSANCTATW
Trigger: CCAGGTGGCAGTGCAGTTCGCAGACCTGCACGACACCCCGGGCCACATGCTGGAGAAAGGAATCATTTCTGATGTGCTGGAATGGAAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CAA 90 bp AATTATCCACTGGGACAAACCCTGAAGTCCCCAGGTGAGGAGAGGCTGGGCCCGTGCAGGTCCAGTTTCTaGTGTTCTCGGCCTCTCTTC +
Preference number: 5 (lower is better)
Translates to: NYPLGQTLKSPGEERLGPCRSSF*CSRPLF
Trigger: GAAGAGAGGCCGAGAACACAAGAAACTGGACCTGCA...CGGGCCCAGCCTCTCCTCACCTGGGGACTTCAGGGTTTGTCCCAGTGGATAATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CAA 90 bp GATCAGACACCGGATCCCCACCTCAGGCAAAAACCACAAGGAACTCGGTGTGCCCCCGTGTCGATATCGTaGTTCTGGAAGCTCTCGGTC +
Preference number: 5 (lower is better)
Translates to: DQTPDPHLRQKPQGTRCAPVSIS*FWKLSV
Trigger: GACCGAGAGCTTCCAGAACAACGATATCGACACGGG...GGCACACCGAGTTCCTTGTGGTTTTTGCCTGAGGTGGGGATCCGGTGTCTGATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CAA 90 bp GAGCCTGGGAACCGAGGCAGTAACTCTCCTCCAGCCATGCTGAATGCTAGGTGTGGGCCGCGTGCACTTTaGAAGGGTCATCGAGTTCTA +
Preference number: 5 (lower is better)
Translates to: EPGNRGSNSPPAMLNARCGPRAL*KGHRVL
Trigger: TAGAACTCGATGACCCTTCAAAAGTGCACGCGGCCC...ACACCTAGCATTCAGCATGGCTGGAGGAGAGTTACTGCCTCGGTTCCCAGGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CAA 90 bp CAAGGAACTCGGTGTGCCTGGTTCAGTTGGCCTCAGAGAGGCAGTGGCAGAATTTGGGTCATGTCCGGCTaGAACTGCTCCCTCAGGTTG +
Preference number: 5 (lower is better)
Translates to: QGTRCAWFSWPQRGSGRIWVMSG*NCSLRL
Trigger: CAACCTGAGGGAGCAGTTCAAGCCGGACATGACCCA...AATTCTGCCACTGCCTCTCTGAGGCCAACTGAACCAGGCACACCGAGTTCCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CAA 90 bp GAGCCTGGGAACCGAGGCAGTAACTCTCCTCCAGCCATGCTGAATGCTAGGTGTTCCTCTCGGAGGCTCTaGCTGTCTTCCTCTGAGTAC +
Preference number: 5 (lower is better)
Translates to: EPGNRGSNSPPAMLNARCSSRRL*LSSSEY
Trigger: GTACTCAGAGGAAGACAGCAAGAGCCTCCGAGAGGA...ACACCTAGCATTCAGCATGGCTGGAGGAGAGTTACTGCCTCGGTTCCCAGGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CAA 90 bp TCAGGCAGTAGGGCACTCAGTACCCTGTGGGTGGCCAATCTGCAGGAGGCACGGCTGAACGTGAAGAACTaGGGGAATTCTCTCTCTTGG +
Preference number: 5 (lower is better)
Translates to: SGSRALSTLWVANLQEARLNVKN*GNSLSW
Trigger: CCAAGAGAGAGAATTCCCCAAGTTCTTCACGTTCAG...CCGTGCCTCCTGCAGATTGGCCACCCACAGGGTACTGAGTGCCCTACTGCCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CAA 90 bp TCAGGCAGTAGGGCACTCAGTACCCTGTGGGTGGCCAATCTGCAGGAGGCACGGTATGTCAGGATATCTTaGGGGTACTTCTCTGGGGAG +
Preference number: 5 (lower is better)
Translates to: SGSRALSTLWVANLQEARYVRIS*GYFSGE
Trigger: CTCCCCAGAGAAGTACCCCAAAGATATCCTGACATA...CCGTGCCTCCTGCAGATTGGCCACCCACAGGGTACTGAGTGCCCTACTGCCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CAA 90 bp CCTGGTTCAGTTGGCCTCAGAGAGGCAGTGGCAGAATTATCCACTGGGACAAACGCCTCAGAATCCAAGTaGGCAGGGTCAGCGGGGACA +
Preference number: 5 (lower is better)
Translates to: PGSVGLREAVAELSTGTNASESK*AGSAGT
Trigger: TGTCCCCGCTGACCCTGCCAACTTGGATTCTGAGGC...GTTTGTCCCAGTGGATAATTCTGCCACTGCCTCTCTGAGGCCAACTGAACCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CAA 90 bp GTGTGCCTGGTTCAGTTGGCCTCAGAGAGGCAGTGGCAGAATTATCCACTGGGAAGAGGCAGGCGCTCCTaGTTGAAGTCCCTGATGACC +
Preference number: 5 (lower is better)
Translates to: VCLVQLASERQWQNYPLGRGRRS*LKSLMT
Trigger: GGTCATCAGGGACTTCAACAAGGAGCGCCTGCCTCT...TCCCAGTGGATAATTCTGCCACTGCCTCTCTGAGGCCAACTGAACCAGGCACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CAA 90 bp GAGCCTGGGAACCGAGGCAGTAACTCTCCTCCAGCCATGCTGAATGCTAGGTGTTCTATGCACAGGGGGTaGATGGTGGAGTCCAGGACA +
Preference number: 5 (lower is better)
Translates to: EPGNRGSNSPPAMLNARCSMHRG*MVESRT
Trigger: TGTCCTGGACTCCACCATCAACCCCCTGTGCATAGA...ACACCTAGCATTCAGCATGGCTGGAGGAGAGTTACTGCCTCGGTTCCCAGGCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CAA 90 bp AACGTGGTAGAACAAGTGTCTTGTGATCAGACACCGGATCCCCACCTCAGGCAAGAGCGCAAGCCGTCCTaGGCTGACCAGTGCTGTTCC +
Preference number: 5 (lower is better)
Translates to: NVVEQVSCDQTPDPHLRQERKPS*ADQCCS
Trigger: GGAACAGCACTGGTCAGCCAAGGACGGCTTGCGCTC...TTGCCTGAGGTGGGGATCCGGTGTCTGATCACAAGACACTTGTTCTACCACGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CAA 90 bp GCTGCGGTGCCTGGCAGTGCTGGGAAAGTCTCTGTAAGCGGATCCAGAGTGTTCAGACTTTGGATGGTCTaGAGGACAGAGTCCCGCTTC +
Preference number: 5 (lower is better)
Translates to: AAVPGSAGKVSVSGSRVFRLWMV*RTESRF
Trigger: GAAGCGGGACTCTGTCCTCAAGACCATCCAAAGTCT...GAACACTCTGGATCCGCTTACAGAGACTTTCCCAGCACTGCCAGGCACCGCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CAA 90 bp GGTCAGGGTGGCAGCCAGTGTCGGTCTGGGCTTTCCTCCACATCAAGAGGACCTGACCTCTGGATGTTCTaGGACCAGACTTTGGATGGT +
Preference number: 5 (lower is better)
Translates to: GQGGSQCRSGLSSTSRGPDLWMF*DQTLDG
Trigger: ACCATCCAAAGTCTGGTCCAAGAACATCCAGAGGTC...AGGTCCTCTTGATGTGGAGGAAAGCCCAGACCGACACTGGCTGCCACCCTGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS TCA 90 bp TATCAGCATGGTCACCAGCTGGTTCTTCTTGGCCACCTGGGAGTGTaGGAAGATGCAGTCCAGCACCTGGGTCATGTCCGGCTTGAACTG +
Preference number: 5 (lower is better)
Translates to: YQHGHQLVLLGHLGV*EDAVQHLGHVRLEL
Trigger: CAGTTCAAGCCGGACATGACCCAGGTGCTGGACTGCATCTTCTCACACTCCCAGGTGGCCAAGAAGAACCAGCTGGTGACCATGCTGATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS TCA 90 bp AGGAGTGGTGATGGGGACCGGGCTGCGATTGTCCTTCGGTATAAATaGCAGCCATTCCAGAATGGTGCAGACCCCCTCGAAGTCATCTGG +
Preference number: 5 (lower is better)
Translates to: RSGDGDRAAIVLRYK*QPFQNGADPLEVIW
Trigger: CCAGATGACTTCGAGGGGGTCTGCACCATTCTGGAATGGCTGTCATTTATACCGAAGGACAATCGCAGCCCGGTCCCCATCACCACTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS GCA 90 bp AACCGAGTGACAAACTCGGCTGGGGACGCGACGGTGAAATCTCTGTaGAGGTCCAGTTTCTTGTGTTCTCGGCCTCTCTTCACCAGATGG +
Preference number: 5 (lower is better)
Translates to: NRVTNSAGDATVKSL*RSSFLCSRPLFTRW
Trigger: CCATCTGGTGAAGAGAGGCCGAGAACACAAGAAACTGGACCTGCACAGAGATTTCACCGTCGCGTCCCCAGCCGAGTTTGTCACTCGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
ENSMUST00000146841.2
CDS CCA 90 bp GTGAATTCTTCAAATCTCCTGAAGGCCACCATGGCCCCCATCCGCTaGCACAGTGGGGAGAAGCCACTGTCCATGAAGAGTTCTGTGCTG +
Preference number: 5 (lower is better)
Translates to: VNSSNLLKATMAPIR*HSGEKPLSMKSSVL
Trigger: CAGCACAGAACTCTTCATGGACAGTGGCTTCTCCCCACTGTGCCAGCGGATGGGGGCCATGGTGGCCTTCAGGAGATTTGAAGAATTCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS CCA 90 bp CGTGAGGTGCTGGCTCAGGTAGGCCACGCAGTCCATGATGACCTCTaGATGTTCTTGGACCAGACTTTGGATGGTCTTGAGGACAGAGTC +
Preference number: 5 (lower is better)
Translates to: REVLAQVGHAVHDDL*MFLDQTLDGLEDRV
Trigger: GACTCTGTCCTCAAGACCATCCAAAGTCTGGTCCAAGAACATCCAGAGGTCATCATGGACTGCGTGGCCTACCTGAGCCAGCACCTCACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS CCA 90 bp CTGTGCAGGTCCAGTTTCTTGTGTTCTCGGCCTCTCTTCACCAGATaGAGTCCAGACATGCTGGGCTTTCCTGCGAGCTCAGGGAAACAG +
Preference number: 5 (lower is better)
Translates to: LCRSSFLCSRPLFTR*SPDMLGFPASSGKQ
Trigger: CTGTTTCCCTGAGCTCGCAGGAAAGCCCAGCATGTCTGGACTCCATCTGGTGAAGAGAGGCCGAGAACACAAGAAACTGGACCTGCACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000146841.2
CDS-3UTR CAA 90 bp AATTATCCACTGGGACAAACCCTGAAGTCCCCAGGTGAGGAGAGGCTGGGCCCGAAAGGGACTCCTCGCTaGAAAGGAGATTGGCTTCCA +
Preference number: 5 (lower is better)
Translates to: NYPLGQTLKSPGEERLGPKGTPR*KGDWLP
Trigger: TGGAAGCCAATCTCCTTTCAAGCGAGGAGTCCCTTT...CGGGCCCAGCCTCTCCTCACCTGGGGACTTCAGGGTTTGTCCCAGTGGATAATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CAA 90 bp GCCTCAGAGAGGCAGTGGCAGAATTATCCACTGGGACAAACCCTGAAGTCCCCATGGAAGGTGATGTCATaGCCGATGACAACGGCGTCC +
Preference number: 5 (lower is better)
Translates to: ASERQWQNYPLGQTLKSPWKVMS*PMTTAS
Trigger: GGACGCCGTTGTCATCGGCAATGACATCACCTTCCA...TGGGGACTTCAGGGTTTGTCCCAGTGGATAATTCTGCCACTGCCTCTCTGAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CAA 90 bp TTTGCAGCTCTTTCAGCAGCCTCTTCAGCGCACCCAAGTGGTCAGGGTGGCAGCACTTGGAATATCTGTTaGATCTCCTCAGCCAGGCCC +
Preference number: 5 (lower is better)
Translates to: FAALSAASSAHPSGQGGSTWNIC*ISSARP
Trigger: GGGCCTGGCTGAGGAGATCAAACAGATATTCCAAGT...GCTGCCACCCTGACCACTTGGGTGCGCTGAAGAGGCTGCTGAAAGAGCTGCAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CAA 90 bp GTGTGCCTGGTTCAGTTGGCCTCAGAGAGGCAGTGGCAGAATTATCCACTGGGAGATCTGGGTGTAGTCTaGGGGCGTCAGGTACAGGTA +
Preference number: 5 (lower is better)
Translates to: VCLVQLASERQWQNYPLGDLGVV*GRQVQV
Trigger: TACCTGTACCTGACGCCCCAAGACTACACCCAGATC...TCCCAGTGGATAATTCTGCCACTGCCTCTCTGAGGCCAACTGAACCAGGCACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CAA 90 bp AATTATCCACTGGGACAAACCCTGAAGTCCCCAGGTGAGGAGAGGCTGGGCCCGTCATCTTCGATGTGCTaGCAGTGCACTGAGTTCTGG +
Preference number: 5 (lower is better)
Translates to: NYPLGQTLKSPGEERLGPSSSMC*QCTEFW
Trigger: CCAGAACTCAGTGCACTGCAAGCACATCGAAGATGA...CGGGCCCAGCCTCTCCTCACCTGGGGACTTCAGGGTTTGTCCCAGTGGATAATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CAA 90 bp GCCTCAGAGAGGCAGTGGCAGAATTATCCACTGGGACAAACCCTGAAGTCCCCATTCTCCACACCCAGGTaGGCATCCTTCCCGATGACA +
Preference number: 5 (lower is better)
Translates to: ASERQWQNYPLGQTLKSPFSTPR*ASFPMT
Trigger: TGTCATCGGGAAGGATGCCAACCTGGGTGTGGAGAA...TGGGGACTTCAGGGTTTGTCCCAGTGGATAATTCTGCCACTGCCTCTCTGAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CAA 90 bp AACGTGGTAGAACAAGTGTCTTGTGATCAGACACCGGATCCCCACCTCAGGCAATCTCTTCCCAGGACCTaGTTGAGAGCACCGGCTCCG +
Preference number: 5 (lower is better)
Translates to: NVVEQVSCDQTPDPHLRQSLPRT*LRAPAP
Trigger: CGGAGCCGGTGCTCTCAACAAGGTCCTGGGAAGAGA...TTGCCTGAGGTGGGGATCCGGTGTCTGATCACAAGACACTTGTTCTACCACGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CAA 90 bp TTTGCAGCTCTTTCAGCAGCCTCTTCAGCGCACCCAAGTGGTCAGGGTGGCAGCGGTGCCATGATTTCCTaGAAACTGCCATGGTCGAAG +
Preference number: 5 (lower is better)
Translates to: FAALSAASSAHPSGQGGSGAMIS*KLPWSK
Trigger: CTTCGACCATGGCAGTTTCAAGGAAATCATGGCACC...GCTGCCACCCTGACCACTTGGGTGCGCTGAAGAGGCTGCTGAAAGAGCTGCAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CAA 90 bp AACGTGGTAGAACAAGTGTCTTGTGATCAGACACCGGATCCCCACCTCAGGCAAGCCTCAGAATCCAAGTaGGCAGGGTCAGCGGGGACA +
Preference number: 5 (lower is better)
Translates to: NVVEQVSCDQTPDPHLRQASESK*AGSAGT
Trigger: TGTCCCCGCTGACCCTGCCAACTTGGATTCTGAGGC...TTGCCTGAGGTGGGGATCCGGTGTCTGATCACAAGACACTTGTTCTACCACGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CAA 90 bp GTGTGCCTGGTTCAGTTGGCCTCAGAGAGGCAGTGGCAGAATTATCCACTGGGATCTATGCACAGGGGGTaGATGGTGGAGTCCAGGACA +
Preference number: 5 (lower is better)
Translates to: VCLVQLASERQWQNYPLGSMHRG*MVESRT
Trigger: TGTCCTGGACTCCACCATCAACCCCCTGTGCATAGA...TCCCAGTGGATAATTCTGCCACTGCCTCTCTGAGGCCAACTGAACCAGGCACAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CAA 90 bp GATCAGACACCGGATCCCCACCTCAGGCAAAAACCACAAGGAACTCGGTGTGCCAGACTTTGGATGGTCTaGAGGACAGAGTCCCGCTTC +
Preference number: 5 (lower is better)
Translates to: DQTPDPHLRQKPQGTRCARLWMV*RTESRF
Trigger: GAAGCGGGACTCTGTCCTCAAGACCATCCAAAGTCT...GGCACACCGAGTTCCTTGTGGTTTTTGCCTGAGGTGGGGATCCGGTGTCTGATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS TCA 90 bp AGTAGAAGAAGGTGCGGGCAGTCTTCCATTCCAGCACATCAGAAATaGTTCCTTTCTCCAGCATGTGGCCCGGGGTGTCGTGCAGGTCTG +
Preference number: 5 (lower is better)
Translates to: SRRRCGQSSIPAHQK*FLSPACGPGCRAGL
Trigger: CAGACCTGCACGACACCCCGGGCCACATGCTGGAGAAAGGAATCATTTCTGATGTGCTGGAATGGAAGACTGCCCGCACCTTCTTCTACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS GCA 90 bp CTGGAAGGCCAGGGCAGGCTCCAAGTGGCGATAAATCCGGTCTTCTaGAAACTCATCCCTCGCTCTGAACGTGAAGAACTTGGGGAATTC +
Preference number: 5 (lower is better)
Translates to: LEGQGRLQVAINPVF*KLIPRSEREELGEF
Trigger: GAATTCCCCAAGTTCTTCACGTTCAGAGCGAGGGATGAGTTTGCAGAAGACCGGATTTATCGCCACTTGGAGCCTGCCCTGGCCTTCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS CCA 90 bp CTTCTCTATGACCCTGTTGCCTCCAAACCGAGTGACAAACTCGGCTaGGGACGCGACGGTGAAATCTCTGTGCAGGTCCAGTTTCTTGTG +
Preference number: 5 (lower is better)
Translates to: LLYDPVASKPSDKLG*GRDGEISVQVQFLV
Trigger: CACAAGAAACTGGACCTGCACAGAGATTTCACCGTCGCGTCCCCAGCCGAGTTTGTCACTCGGTTTGGAGGCAACAGGGTCATAGAGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
ENSMUST00000146841.2
CDS CCA 90 bp TATCTAAATCCTTTGTGGGGATCCTCTGGGTCCACCCAAGCCACTTaGAATATCTGTTTGATCTCCTCAGCCAGGCCCATACGGGCCCCG +
Preference number: 5 (lower is better)
Translates to: YLNPLWGSSGSTQAT*NICLISSARPIRAP
Trigger: CGGGGCCCGTATGGGCCTGGCTGAGGAGATCAAACAGATATTCCAAGTGGCTTGGGTGGACCCAGAGGATCCCCACAAAGGATTTAGATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CAA 90 bp AGTTTATTTTGCAGCTCTTTCAGCAGCCTCTTCAGCGCACCCAAGTGGTCAGGGGAGGGCCAGGTGTCATaGGAAGACAGTGGGTTCCTC +
Preference number: 5 (lower is better)
Translates to: SLFCSSFSSLFSAPKWSGEGQVS*EDSGFL
Trigger: GAGGAACCCACTGTCTTCCAATGACACCTGGCCCTC...CCCTGACCACTTGGGTGCGCTGAAGAGGCTGCTGAAAGAGCTGCAAAATAAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CAA 90 bp CAAGGAACTCGGTGTGCCTGGTTCAGTTGGCCTCAGAGAGGCAGTGGCAGAATTGTCATCAGCTGTCTCTaGATGTGTGCCTGCTTCCTG +
Preference number: 5 (lower is better)
Translates to: QGTRCAWFSWPQRGSGRIVISCL*MCACFL
Trigger: CAGGAAGCAGGCACACATCAAGAGACAGCTGATGAC...AATTCTGCCACTGCCTCTCTGAGGCCAACTGAACCAGGCACACCGAGTTCCTTG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CAA 90 bp AACGTGGTAGAACAAGTGTCTTGTGATCAGACACCGGATCCCCACCTCAGGCAAAGATGCATCTTGTGGTaGGCACAGGGCACAGCGGTC +
Preference number: 5 (lower is better)
Translates to: NVVEQVSCDQTPDPHLRQRCILW*AQGTAV
Trigger: GACCGCTGTGCCCTGTGCCAACCACAAGATGCATCT...TTGCCTGAGGTGGGGATCCGGTGTCTGATCACAAGACACTTGTTCTACCACGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CAA 90 bp AGTTTATTTTGCAGCTCTTTCAGCAGCCTCTTCAGCGCACCCAAGTGGTCAGGGCTCCACCAGCTGACCTaGAGAGTCCAACACCAGCTC +
Preference number: 5 (lower is better)
Translates to: SLFCSSFSSLFSAPKWSGLHQLT*RVQHQL
Trigger: GAGCTGGTGTTGGACTCTCAAGGTCAGCTGGTGGAG...CCCTGACCACTTGGGTGCGCTGAAGAGGCTGCTGAAAGAGCTGCAAAATAAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CAA 90 bp GCCTGGTTCAGTTGGCCTCAGAGAGGCAGTGGCAGAATTATCCACTGGGACAAATGGAAGGTGATGTCATaGCCGATGACAACGGCGTCC +
Preference number: 5 (lower is better)
Translates to: AWFSWPQRGSGRIIHWDKWKVMS*PMTTAS
Trigger: GGACGCCGTTGTCATCGGCAATGACATCACCTTCCA...TTTGTCCCAGTGGATAATTCTGCCACTGCCTCTCTGAGGCCAACTGAACCAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CAA 90 bp GTGTGCCTGGTTCAGTTGGCCTCAGAGAGGCAGTGGCAGAATTATCCACTGGGAGCCTGCTGGATGATCTaGGCCTCAGAATCCAAGTTG +
Preference number: 5 (lower is better)
Translates to: VCLVQLASERQWQNYPLGACWMI*ASESKL
Trigger: CAACTTGGATTCTGAGGCCAAGATCATCCAGCAGGC...TCCCAGTGGATAATTCTGCCACTGCCTCTCTGAGGCCAACTGAACCAGGCACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS TCA 90 bp GGGACTCCTCGCTTGAAAGGAGATTGGCTTCCACCTTACTGTTGGTaGGCGGCTTCGAGTCTGTCATCTTCCCCCAGATTTTTAGCCAGG +
Preference number: 5 (lower is better)
Translates to: GTPRLKGDWLPPYCW*AASSLSSSPRFLAR
Trigger: CCTGGCTAAAAATCTGGGGGAAGATGACAGACTCGAAGCCGCTCACCAACAGTAAGGTGGAAGCCAATCTCCTTTCAAGCGAGGAGTCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CAA 90 bp GCCTCAGAGAGGCAGTGGCAGAATTATCCACTGGGACAAACCCTGAAGTCCCCAAAAGGGACTCCTCGCTaGAAAGGAGATTGGCTTCCA +
Preference number: 5 (lower is better)
Translates to: ASERQWQNYPLGQTLKSPKGTPR*KGDWLP
Trigger: TGGAAGCCAATCTCCTTTCAAGCGAGGAGTCCCTTT...TGGGGACTTCAGGGTTTGTCCCAGTGGATAATTCTGCCACTGCCTCTCTGAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CAA 90 bp AACGTGGTAGAACAAGTGTCTTGTGATCAGACACCGGATCCCCACCTCAGGCAACACTCCAGGGTAAGGTaGGGATTTGCAGTGTCTGCG +
Preference number: 5 (lower is better)
Translates to: NVVEQVSCDQTPDPHLRQHSRVR*GFAVSA
Trigger: CGCAGACACTGCAAATCCCAACCTTACCCTGGAGTG...TTGCCTGAGGTGGGGATCCGGTGTCTGATCACAAGACACTTGTTCTACCACGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CAA 90 bp CCTGGTTCAGTTGGCCTCAGAGAGGCAGTGGCAGAATTATCCACTGGGACAAACTGCGCAGCAGGCAGGTaGACATCTGCGATCATTTCA +
Preference number: 5 (lower is better)
Translates to: PGSVGLREAVAELSTGTNCAAGR*TSAIIS
Trigger: TGAAATGATCGCAGATGTCAACCTGCCTGCTGCGCA...GTTTGTCCCAGTGGATAATTCTGCCACTGCCTCTCTGAGGCCAACTGAACCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CAA 90 bp GTGTGCCTGGTTCAGTTGGCCTCAGAGAGGCAGTGGCAGAATTATCCACTGGGAACAAGGATGTGCTTCTaGGACTGTACAAAGGCACGG +
Preference number: 5 (lower is better)
Translates to: VCLVQLASERQWQNYPLGTRMCF*DCTKAR
Trigger: CCGTGCCTTTGTACAGTCCAAGAAGCACATCCTTGT...TCCCAGTGGATAATTCTGCCACTGCCTCTCTGAGGCCAACTGAACCAGGCACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CAA 90 bp CTTTCCTCCACATCAAGAGGACCTTGCCCAGAAGAACCCTTTATCCCCCAAGAAAGATGCATCTTGTGGTaGGCACAGGGCACAGCGGTC +
Preference number: 5 (lower is better)
Translates to: LSSTSRGPCPEEPFIPQERCILW*AQGTAV
Trigger: GACCGCTGTGCCCTGTGCCAACCACAAGATGCATCT...TTCTTGGGGGATAAAGGGTTCTTCTGGGCAAGGTCCTCTTGATGTGGAGGAAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CAA 90 bp GAGCCTGGGAACCGAGGCAGTAACTCTCCTCCAGCCATGCTGAATGCTAGGTGTTTCTTGGACCAGACTTaGGATGGTCTTGAGGACAGA +
Preference number: 5 (lower is better)
Translates to: EPGNRGSNSPPAMLNARCFLDQT*DGLEDR
Trigger: TCTGTCCTCAAGACCATCCAAAGTCTGGTCCAAGAA...ACACCTAGCATTCAGCATGGCTGGAGGAGAGTTACTGCCTCGGTTCCCAGGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CAA 90 bp CTTTCCTCCACATCAAGAGGACCTTGCCCAGAAGAACCCTTTATCCCCCAAGAACCCGTGTCGATATCGTaGTTCTGGAAGCTCTCGGTC +
Preference number: 5 (lower is better)
Translates to: LSSTSRGPCPEEPFIPQEPVSIS*FWKLSV
Trigger: GACCGAGAGCTTCCAGAACAACGATATCGACACGGG...TTCTTGGGGGATAAAGGGTTCTTCTGGGCAAGGTCCTCTTGATGTGGAGGAAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CAA 90 bp CAAGGAACTCGGTGTGCCTGGTTCAGTTGGCCTCAGAGAGGCAGTGGCAGAATTCTGAACGTGAAGAACTaGGGGAATTCTCTCTCTTGG +
Preference number: 5 (lower is better)
Translates to: QGTRCAWFSWPQRGSGRILNVKN*GNSLSW
Trigger: CCAAGAGAGAGAATTCCCCAAGTTCTTCACGTTCAG...AATTCTGCCACTGCCTCTCTGAGGCCAACTGAACCAGGCACACCGAGTTCCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CAA 90 bp AACGTGGTAGAACAAGTGTCTTGTGATCAGACACCGGATCCCCACCTCAGGCAAGGATACTCCGGGGTCTaGAACCTCATTTTGAAGGCC +
Preference number: 5 (lower is better)
Translates to: NVVEQVSCDQTPDPHLRQGYSGV*NLILKA
Trigger: GGCCTTCAAAATGAGGTTCAAGACCCCGGAGTATCC...TTGCCTGAGGTGGGGATCCGGTGTCTGATCACAAGACACTTGTTCTACCACGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS CCA 90 bp CAACACCAGCTCTGTGTATGTCAGGATATCTTTGGGGTACTTCTCTaGGGAGCCCCACAGTTTAAAGAGAGCCTGCCTGAACATCTCTGG +
Preference number: 5 (lower is better)
Translates to: QHQLCVCQDIFGVLL*GAPQFKESLPEHLW
Trigger: CCAGAGATGTTCAGGCAGGCTCTCTTTAAACTGTGGGGCTCCCCAGAGAAGTACCCCAAAGATATCCTGACATACACAGAGCTGGTGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CAA 90 bp CTTTCCTCCACATCAAGAGGACCTTGCCCAGAAGAACCCTTTATCCCCCAAGAATGCGCAGCAGGCAGGTaGACATCTGCGATCATTTCA +
Preference number: 5 (lower is better)
Translates to: LSSTSRGPCPEEPFIPQECAAGR*TSAIIS
Trigger: TGAAATGATCGCAGATGTCAACCTGCCTGCTGCGCA...TTCTTGGGGGATAAAGGGTTCTTCTGGGCAAGGTCCTCTTGATGTGGAGGAAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CAA 90 bp AACGTGGTAGAACAAGTGTCTTGTGATCAGACACCGGATCCCCACCTCAGGCAAACTTGGAATATCTGTTaGATCTCCTCAGCCAGGCCC +
Preference number: 5 (lower is better)
Translates to: NVVEQVSCDQTPDPHLRQTWNIC*ISSARP
Trigger: GGGCCTGGCTGAGGAGATCAAACAGATATTCCAAGT...TTGCCTGAGGTGGGGATCCGGTGTCTGATCACAAGACACTTGTTCTACCACGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CAA 90 bp GCCTGGTTCAGTTGGCCTCAGAGAGGCAGTGGCAGAATTATCCACTGGGACAAAGTCCACCCAAGCCACTaGGAATATCTGTTTGATCTC +
Preference number: 5 (lower is better)
Translates to: AWFSWPQRGSGRIIHWDKVHPSH*EYLFDL
Trigger: GAGATCAAACAGATATTCCAAGTGGCTTGGGTGGAC...TTTGTCCCAGTGGATAATTCTGCCACTGCCTCTCTGAGGCCAACTGAACCAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CAA 90 bp AGTTTATTTTGCAGCTCTTTCAGCAGCCTCTTCAGCGCACCCAAGTGGTCAGGGGGTGCCATGATTTCCTaGAAACTGCCATGGTCGAAG +
Preference number: 5 (lower is better)
Translates to: SLFCSSFSSLFSAPKWSGGAMIS*KLPWSK
Trigger: CTTCGACCATGGCAGTTTCAAGGAAATCATGGCACC...CCCTGACCACTTGGGTGCGCTGAAGAGGCTGCTGAAAGAGCTGCAAAATAAACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CAA 90 bp AGTTTATTTTGCAGCTCTTTCAGCAGCCTCTTCAGCGCACCCAAGTGGTCAGGGGACCTCTGGATGTTCTaGGACCAGACTTTGGATGGT +
Preference number: 5 (lower is better)
Translates to: SLFCSSFSSLFSAPKWSGDLWMF*DQTLDG
Trigger: ACCATCCAAAGTCTGGTCCAAGAACATCCAGAGGTC...CCCTGACCACTTGGGTGCGCTGAAGAGGCTGCTGAAAGAGCTGCAAAATAAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS GCA 90 bp GAGTACAGGGAAGTGCACGCCTTACTGAAGAGAAGAGTGTCTGTCTaGACGTTGGCAAAGCAGGAGATGACTTCATCAAAGTTCCTGGTG +
Preference number: 5 (lower is better)
Translates to: EYREVHALLKRRVSV*TLAKQEMTSSKFLV
Trigger: CACCAGGAACTTTGATGAAGTCATCTCCTGCTTTGCCAACGTGCAGACAGACACTCTTCTCTTCAGTAAGGCGTGCACTTCCCTGTACTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CAA 90 bp CTTTCCTCCACATCAAGAGGACCTTGCCCAGAAGAACCCTTTATCCCCCAAGAACCGCCTTCGGAGGCTTaGATCATCAAAGGAAATCCT +
Preference number: 5 (lower is better)
Translates to: LSSTSRGPCPEEPFIPQEPPSEA*IIKGNP
Trigger: AGGATTTCCTTTGATGATCAAAGCCTCCGAAGGCGG...TTCTTGGGGGATAAAGGGTTCTTCTGGGCAAGGTCCTCTTGATGTGGAGGAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CAA 90 bp AACGTGGTAGAACAAGTGTCTTGTGATCAGACACCGGATCCCCACCTCAGGCAATATGTCAGGATATCTTaGGGGTACTTCTCTGGGGAG +
Preference number: 5 (lower is better)
Translates to: NVVEQVSCDQTPDPHLRQYVRIS*GYFSGE
Trigger: CTCCCCAGAGAAGTACCCCAAAGATATCCTGACATA...TTGCCTGAGGTGGGGATCCGGTGTCTGATCACAAGACACTTGTTCTACCACGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS-3UTR CAA 90 bp CTTTCCTCCACATCAAGAGGACCTTGCCCAGAAGAACCCTTTATCCCCCAAGAATCATCTTCGATGTGCTaGCAGTGCACTGAGTTCTGG +
Preference number: 5 (lower is better)
Translates to: LSSTSRGPCPEEPFIPQESSSMC*QCTEFW
Trigger: CCAGAACTCAGTGCACTGCAAGCACATCGAAGATGA...TTCTTGGGGGATAAAGGGTTCTTCTGGGCAAGGTCCTCTTGATGTGGAGGAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS CAA 72 bp CGGGCCTTCAGCTGGCCCTCCAGCTCCTTCCGGTCCTaGTCGGGAAGCTGGGCTTTCCCCAGCTGTCCCACG +
Preference number: 6 (lower is better)
Translates to: RAFSWPSSSFRS*SGSWAFPSCPT
Trigger: CGTGGGACAGCTGGGGAAAGCCCAGCTTCCCGACAAGGACCGGAAGGAGCTGGAGGGCCAGCTGAAGGCCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS CCA 72 bp ACCTCTCGGTCCGCCTTACGCTGCAGGGTGGCGGCATaGCAGTCCAGGATGGTGGCTATCTGCTGGCTGGGG +
Preference number: 6 (lower is better)
Translates to: TSRSALRCRVAA*QSRMVAICWLG
Trigger: CCCCAGCCAGCAGATAGCCACCATCCTGGACTGCCATGCCGCCACCCTGCAGCGTAAGGCGGACCGAGAGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS CCA 72 bp CCTCGCCACCACGCAGCCAGCCTCCAGTATAACCCCTaGCCGCTTGATGTACTTCACCCGGCCGCTCTCCTG +
Preference number: 6 (lower is better)
Translates to: PRHHAASLQYNP*PLDVLHPAALL
Trigger: CAGGAGAGCGGCCGGGTGAAGTACATCAAGCGGCCAGGGGTTATACTGGAGGCTGGCTGCGTGGTGGCGAGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS CCA 72 bp CAGCGCCCTCAGTCTCCACGAACCAGCGTCGCAGCATaGACTGTGTGTGCTCGTGGTTCAGCTCGGGGCTGG +
Preference number: 6 (lower is better)
Translates to: QRPQSPRTSVAA*TVCARGSARGW
Trigger: CCAGCCCCGAGCTGAACCACGAGCACACACAGTCCATGCTGCGACGCTGGTTCGTGGAGACTGAGGGCGCTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS CAA 72 bp GCCCATACGGGCCCCGCTGTTAGCTGCCAGGTAGATTaGGGGGATGCCCTCTGTCCGGGCCATCTCAGACGC +
Preference number: 6 (lower is better)
Translates to: AHTGPAVSCQVD*GDALCPGHLRR
Trigger: GCGTCTGAGATGGCCCGGACAGAGGGCATCCCCCAAATCTACCTGGCAGCTAACAGCGGGGCCCGTATGGGC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS CAA 90 bp CTCAGCCAGGCCCATACGGGCCCCGCTGTTAGCTGCCAGGTAGATTaGGGGGATGCCCTCTGTCCGGGCCATCTCAGACGCTCGCAGGTA +
Preference number: 6 (lower is better)
Translates to: LSQAHTGPAVSCQVD*GDALCPGHLRRSQV
Trigger: TACCTGCGAGCGTCTGAGATGGCCCGGACAGAGGGCATCCCCCAAATCTACCTGGCAGCTAACAGCGGGGCCCGTATGGGCCTGGCTGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS GCA 72 bp TGTGGTTGGCACAGGGCACAGCGGTCAGGTCAAAGTTaGGCATCCGGCTCAGCTCCAGCTGGAAGGCCAGGG +
Preference number: 6 (lower is better)
Translates to: CGWHRAQRSGQS*ASGSAPAGRPG
Trigger: CCCTGGCCTTCCAGCTGGAGCTGAGCCGGATGCGCAACTTTGACCTGACCGCTGTGCCCTGTGCCAACCACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS GCA 72 bp GTGGCCCGGGGTGTCGTGCAGGTCTGCGAACTGCACTaGCACCTGGTGGTAGATGGGAAGCAGCAGTTCCTC +
Preference number: 6 (lower is better)
Translates to: VARGVVQVCELH*HLVVDGKQQFL
Trigger: GAGGAACTGCTGCTTCCCATCTACCACCAGGTGGCAGTGCAGTTCGCAGACCTGCACGACACCCCGGGCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS GCA 72 bp CGGATGGTGGAGCGCAAGCCGTCCTTGGCTGACCAGTaGTGTTCCAGCCACTGGACCACCACCTGGTTGCTG +
Preference number: 6 (lower is better)
Translates to: RMVERKPSLADQ*CSSHWTTTWLL
Trigger: CAGCAACCAGGTGGTGGTCCAGTGGCTGGAACAGCACTGGTCAGCCAAGGACGGCTTGCGCTCCACCATCCG
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS CCA 72 bp GGAACCTCTGGGCCCGGGGCGGCTGTCCAGTTGGTTTaGAGTTCTGGGGAGGGCCAGGTGTCATTGGAAGAC +
Preference number: 6 (lower is better)
Translates to: GTSGPGAAVQLV*SSGEGQVSLED
Trigger: GTCTTCCAATGACACCTGGCCCTCCCCAGAACTCCAAACCAACTGGACAGCCGCCCCGGGCCCAGAGGTTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS CCA 72 bp CATCTGGAACCTCTGGGCCCGGGGCGGCTGTCCAGTTaGTTTGGAGTTCTGGGGAGGGCCAGGTGTCATTGG +
Preference number: 6 (lower is better)
Translates to: HLEPLGPGRLSS*FGVLGRARCHW
Trigger: CCAATGACACCTGGCCCTCCCCAGAACTCCAAACCAACTGGACAGCCGCCCCGGGCCCAGAGGTTCCAGATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS CCA 72 bp GCAGGTCTGCGAACTGCACTGCCACCTGGTGGTAGATaGGAAGCAGCAGTTCCTCCCGGGCCTTCAGCTGGC +
Preference number: 6 (lower is better)
Translates to: AGLRTALPPGGR*EAAVPPGPSAG
Trigger: GCCAGCTGAAGGCCCGGGAGGAACTGCTGCTTCCCATCTACCACCAGGTGGCAGTGCAGTTCGCAGACCTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS CAA 72 bp GCATCTGGAACCTCTGGGCCCGGGGCGGCTGTCCAGTaGGTTTGGAGTTCTGGGGAGGGCCAGGTGTCATTG +
Preference number: 6 (lower is better)
Translates to: ASGTSGPGAAVQ*VWSSGEGQVSL
Trigger: CAATGACACCTGGCCCTCCCCAGAACTCCAAACCAACTGGACAGCCGCCCCGGGCCCAGAGGTTCCAGATGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS CAA 90 bp AGCCTCGCCACCACGCAGCCAGCCTCCAGTATAACCCCTGGCCGCTaGATGTACTTCACCCGGCCGCTCTCCTGCACGTTCAGGGTCATG +
Preference number: 6 (lower is better)
Translates to: SLATTQPASSITPGR*MYFTRPLSCTFRVM
Trigger: CATGACCCTGAACGTGCAGGAGAGCGGCCGGGTGAAGTACATCAAGCGGCCAGGGGTTATACTGGAGGCTGGCTGCGTGGTGGCGAGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS CAA 90 bp AGTTCCTCCCGGGCCTTCAGCTGGCCCTCCAGCTCCTTCCGGTCCTaGTCGGGAAGCTGGGCTTTCCCCAGCTGTCCCACGAGCTTCTTA +
Preference number: 6 (lower is better)
Translates to: SSSRAFSWPSSSFRS*SGSWAFPSCPTSFL
Trigger: TAAGAAGCTCGTGGGACAGCTGGGGAAAGCCCAGCTTCCCGACAAGGACCGGAAGGAGCTGGAGGGCCAGCTGAAGGCCCGGGAGGAACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS TCA 72 bp CCACCATCTTGGCCAGGAGGACAGCACACTGTTCCATaGACTCAAACACGGCAGGCGCGGCGATGGTGGCCG +
Preference number: 6 (lower is better)
Translates to: PPSWPGGQHTVP*TQTRQARRWWP
Trigger: CGGCCACCATCGCCGCGCCTGCCGTGTTTGAGTTCATGGAACAGTGTGCTGTCCTCCTGGCCAAGATGGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS TCA 72 bp CTGCCACATTCAAGGCCCCACACACCACCCCAAGCATaGTGTCCGGCTTCTCTGCCTGCACCCGCTGAGCGA +
Preference number: 6 (lower is better)
Translates to: LPHSRPHTPPQA*CPASLPAPAER
Trigger: TCGCTCAGCGGGTGCAGGCAGAGAAGCCGGACATCATGCTTGGGGTGGTGTGTGGGGCCTTGAATGTGGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS TCA 72 bp GCACGGCCATCCGGTTGGGGTGGGAAGAGGGCAGCATaGACTGGAACTCCACCACACAGGTGCCATCTGGGA +
Preference number: 6 (lower is better)
Translates to: ARPSGWGGKRAA*TGTPPHRCHLG
Trigger: TCCCAGATGGCACCTGTGTGGTGGAGTTCCAGTTCATGCTGCCCTCTTCCCACCCCAACCGGATGGCCGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS GCA 72 bp TCCTTCAGTCGGTGCAGGGGCACGCCCATGGCGATCTaGAACTGCGCAGCAGGCAGGTTGACATCTGCGATC +
Preference number: 6 (lower is better)
Translates to: SFSRCRGTPMAI*NCAAGRLTSAI
Trigger: GATCGCAGATGTCAACCTGCCTGCTGCGCAGTTGCAGATCGCCATGGGCGTGCCCCTGCACCGACTGAAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS GCA 72 bp TGGGCAGGGAGCTCCCCAGTAAACGGCTGGGCCGCGTaGACTTTTGAAGGGTCATCGAGTTCTAGCCTCGCC +
Preference number: 6 (lower is better)
Translates to: WAGSSPVNGWAA*TFEGSSSSSLA
Trigger: GGCGAGGCTAGAACTCGATGACCCTTCAAAAGTGCACGCGGCCCAGCCGTTTACTGGGGAGCTCCCTGCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS GCA 72 bp GTCTCCACGAACCAGCGTCGCAGCATGGACTGTGTGTaGTCGTGGTTCAGCTCGGGGCTGGCTCGGAGTATC +
Preference number: 6 (lower is better)
Translates to: VSTNQRRSMDCV*SWFSSGLARSI
Trigger: GATACTCCGAGCCAGCCCCGAGCTGAACCACGAGCACACACAGTCCATGCTGCGACGCTGGTTCGTGGAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS CCA 72 bp TGGGCCCGGGGCGGCTGTCCAGTTGGTTTGGAGTTCTaGGGAGGGCCAGGTGTCATTGGAAGACAGTGGGTT +
Preference number: 6 (lower is better)
Translates to: WARGGCPVGLEF*GGPGVIGRQWV
Trigger: AACCCACTGTCTTCCAATGACACCTGGCCCTCCCCAGAACTCCAAACCAACTGGACAGCCGCCCCGGGCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS CCA 72 bp GCACGGAAGACTGGCACCAGCGCCTCGTCCTCCATGTaGTCGGCACACTGGATGGCCACATTCAGGATGTGG +
Preference number: 6 (lower is better)
Translates to: ARKTGTSASSSM*SAHWMATFRMW
Trigger: CCACATCCTGAATGTGGCCATCCAGTGTGCCGACCACATGGAGGACGAGGCGCTGGTGCCAGTCTTCCGTGC
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS CCA 72 bp ACGAACCAGCGTCGCAGCATGGACTGTGTGTGCTCGTaGTTCAGCTCGGGGCTGGCTCGGAGTATCTCCTGC +
Preference number: 6 (lower is better)
Translates to: TNQRRSMDCVCS*FSSGLARSISC
Trigger: GCAGGAGATACTCCGAGCCAGCCCCGAGCTGAACCACGAGCACACACAGTCCATGCTGCGACGCTGGTTCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS CAA 72 bp TGGAACCTCTGGGCCCGGGGCGGCTGTCCAGTTGGTTaGGAGTTCTGGGGAGGGCCAGGTGTCATTGGAAGA +
Preference number: 6 (lower is better)
Translates to: WNLWARGGCPVG*EFWGGPGVIGR
Trigger: TCTTCCAATGACACCTGGCCCTCCCCAGAACTCCAAACCAACTGGACAGCCGCCCCGGGCCCAGAGGTTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS CAA 72 bp ACCACGCAGCCAGCCTCCAGTATAACCCCTGGCCGCTaGATGTACTTCACCCGGCCGCTCTCCTGCACGTTC +
Preference number: 6 (lower is better)
Translates to: TTQPASSITPGR*MYFTRPLSCTF
Trigger: GAACGTGCAGGAGAGCGGCCGGGTGAAGTACATCAAGCGGCCAGGGGTTATACTGGAGGCTGGCTGCGTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS CAA 90 bp GCGGCTGTCCAGTTGGTTTGGAGTTCTGGGGAGGGCCAGGTGTCATaGGAAGACAGTGGGTTCCTCGGAGGCCTCTGGCATGAGCTTGGC +
Preference number: 6 (lower is better)
Translates to: AAVQLVWSSGEGQVS*EDSGFLGGLWHELG
Trigger: GCCAAGCTCATGCCAGAGGCCTCCGAGGAACCCACTGTCTTCCAATGACACCTGGCCCTCCCCAGAACTCCAAACCAACTGGACAGCCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS CAA 90 bp TGCAGGGGCACGCCCATGGCGATCTGCAACTGCGCAGCAGGCAGGTaGACATCTGCGATCATTTCAGTGCACGGATGCTCCACCTGCAGG +
Preference number: 6 (lower is better)
Translates to: CRGTPMAICNCAAGR*TSAIISVHGCSTCR
Trigger: CCTGCAGGTGGAGCATCCGTGCACTGAAATGATCGCAGATGTCAACCTGCCTGCTGCGCAGTTGCAGATCGCCATGGGCGTGCCCCTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS TCA 72 bp TGCCCTGGTGCCGGCTGTCCTCCGTCCACTCCACTGTaGGACCGCTTCCACTCCAGGGTAAGGTTGGGATTT +
Preference number: 6 (lower is better)
Translates to: CPGAGCPPSTPL*DRFHSRVRLGF
Trigger: AAATCCCAACCTTACCCTGGAGTGGAAGCGGTCTCACAGTGGAGTGGACGGAGGACAGCCGGCACCAGGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS TCA 72 bp CCATCCGCTGGCACAGTGGGGAGAAGCCACTGTCCATaGAGAGTTCTGTGCTGTGCCTCAGCAGGTCGGGGT +
Preference number: 6 (lower is better)
Translates to: PSAGTVGRSHCP*RVLCCASAGRG
Trigger: ACCCCGACCTGCTGAGGCACAGCACAGAACTCTTCATGGACAGTGGCTTCTCCCCACTGTGCCAGCGGATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS GCA 72 bp GACTCTCCGTACAGAAGCCGTATGTCCTTCAGTCGGTaGAGGGGCACGCCCATGGCGATCTGCAACTGCGCA +
Preference number: 6 (lower is better)
Translates to: DSPYRSRMSFSR*RGTPMAICNCA
Trigger: TGCGCAGTTGCAGATCGCCATGGGCGTGCCCCTGCACCGACTGAAGGACATACGGCTTCTGTACGGAGAGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS GCA 72 bp ATGGCCTCTTCACGGTTCTCGCCCCAGGAGAAGCAGTaGCCAAACTGGGAATCGGCGAACTCGTGCAAGCCC +
Preference number: 6 (lower is better)
Translates to: MASSRFSPQEKQ*PNWESANSCKP
Trigger: GGGCTTGCACGAGTTCGCCGATTCCCAGTTTGGGCACTGCTTCTCCTGGGGCGAGAACCGTGAAGAGGCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS GCA 72 bp CCAGCTTCCACGTGGTCTCCGTCCTCCACCGTATACTaGATCAGCTTCCCAGCCGAGGGGGATCTCAGGACA +
Preference number: 6 (lower is better)
Translates to: PASTWSPSSTVY*ISFPAEGDLRT
Trigger: TGTCCTGAGATCCCCCTCGGCTGGGAAGCTGATGCAGTATACGGTGGAGGACGGAGACCACGTGGAAGCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS GCA 72 bp GTGTTCATGAAGAAGACCTCTCGGTCCGCCTTACGCTaGAGGGTGGCGGCATGGCAGTCCAGGATGGTGGCT +
Preference number: 6 (lower is better)
Translates to: VFMKKTSRSALR*RVAAWQSRMVA
Trigger: AGCCACCATCCTGGACTGCCATGCCGCCACCCTGCAGCGTAAGGCGGACCGAGAGGTCTTCTTCATGAACAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS CCA 72 bp GGCTGGGAAGGACAACCCATTAGCATCTGGAACCTCTaGGCCCGGGGCGGCTGTCCAGTTGGTTTGGAGTTC +
Preference number: 6 (lower is better)
Translates to: GWEGQPISIWNL*ARGGCPVGLEF
Trigger: GAACTCCAAACCAACTGGACAGCCGCCCCGGGCCCAGAGGTTCCAGATGCTAATGGGTTGTCCTTCCCAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS CCA 72 bp TCTGCCAAGACCTGGACCTCCAGGTGCCGTGCGTTCTaGGCCAGCTTCATTAGAAAGATCGGCGAGCCCGGA +
Preference number: 6 (lower is better)
Translates to: SAKTWTSRCRAF*ASFIRKIGEPG
Trigger: TCCGGGCTCGCCGATCTTTCTAATGAAGCTGGCCCAGAACGCACGGCACCTGGAGGTCCAGGTCTTGGCAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS CCA 72 bp AACTGGCATAGCACGGAGGTGATGTTACTGGCGTACTaGGCCATCACCCTGCGGACTGCCTTCTCCACCGGG +
Preference number: 6 (lower is better)
Translates to: NWHSTEVMLLAY*AITLRTAFSTG
Trigger: CCCGGTGGAGAAGGCAGTCCGCAGGGTGATGGCCCAGTACGCCAGTAACATCACCTCCGTGCTATGCCAGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS CCA 72 bp CCTGAAGGCCACCATGGCCCCCATCCGCTGGCACAGTaGGGAGAAGCCACTGTCCATGAAGAGTTCTGTGCT +
Preference number: 6 (lower is better)
Translates to: PEGHHGPHPLAQ*GEATVHEEFCA
Trigger: AGCACAGAACTCTTCATGGACAGTGGCTTCTCCCCACTGTGCCAGCGGATGGGGGCCATGGTGGCCTTCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS CCA 72 bp GTGCAGACCCCCTCGAAGTCATCTGGCACGGTGACGTaGGAGACCCCGTTGGTATGCATGATCTGCACGCCA +
Preference number: 6 (lower is better)
Translates to: VQTPSKSSGTVT*ETPLVCMICTP
Trigger: TGGCGTGCAGATCATGCATACCAACGGGGTCTCCCACGTCACCGTGCCAGATGACTTCGAGGGGGTCTGCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS CAA 72 bp CGGAAAAGCATCGGGAAGTCCTCTGCACTCTCAGCCTaGCGGATACCTTTCCCGCCTCCGCCTTCGGAGGCT +
Preference number: 6 (lower is better)
Translates to: RKSIGKSSALSA*RIPFPPPPSEA
Trigger: AGCCTCCGAAGGCGGAGGCGGGAAAGGTATCCGCAAGGCTGAGAGTGCAGAGGACTTCCCGATGCTTTTCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS CAA 90 bp CAGACCCCCTCGAAGTCATCTGGCACGGTGACGTGGGAGACCCCGTaGGTATGCATGATCTGCACGCCACCTAGCTGGTTGTTGGACGTG +
Preference number: 6 (lower is better)
Translates to: QTPSKSSGTVTWETP*VCMICTPPSWLLDV
Trigger: CACGTCCAACAACCAGCTAGGTGGCGTGCAGATCATGCATACCAACGGGGTCTCCCACGTCACCGTGCCAGATGACTTCGAGGGGGTCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS TCA 72 bp ATTGGAAGACAGTGGGTTCCTCGGAGGCCTCTGGCATaGGCTTGGCAGGGAGTTCCTCTGCTGACTGGCGTC +
Preference number: 6 (lower is better)
Translates to: IGRQWVPRRPLA*AWQGVPLLTGV
Trigger: GACGCCAGTCAGCAGAGGAACTCCCTGCCAAGCTCATGCCAGAGGCCTCCGAGGAACCCACTGTCTTCCAAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS TCA 72 bp GGGCAACCTTGCAGTGCTCGCTTCTGCTCAGCTGCGTaGGCTCACAGAGGATGGAGGTCAGCTCGTCTGACA +
Preference number: 6 (lower is better)
Translates to: GQPCSARFCSAA*AHRGWRSARLT
Trigger: TGTCAGACGAGCTGACCTCCATCCTCTGTGAGCTCACGCAGCTGAGCAGAAGCGAGCACTGCAAGGTTGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS TCA 72 bp CCTCTGGGTCCACCCAAGCCACTTGGAATATCTGTTTaGTCTCCTCAGCCAGGCCCATACGGGCCCCGCTGT +
Preference number: 6 (lower is better)
Translates to: PLGPPKPLGISV*SPQPGPYGPRC
Trigger: ACAGCGGGGCCCGTATGGGCCTGGCTGAGGAGATCAAACAGATATTCCAAGTGGCTTGGGTGGACCCAGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS GCA 72 bp AGTCGGTGCAGGGGCACGCCCATGGCGATCTGCAACTaGGCAGCAGGCAGGTTGACATCTGCGATCATTTCA +
Preference number: 6 (lower is better)
Translates to: SRCRGTPMAICN*AAGRLTSAIIS
Trigger: TGAAATGATCGCAGATGTCAACCTGCCTGCTGCGCAGTTGCAGATCGCCATGGGCGTGCCCCTGCACCGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS GCA 72 bp CTGAGGGCAACCTTGCAGTGCTCGCTTCTGCTCAGCTaGGTGAGCTCACAGAGGATGGAGGTCAGCTCGTCT +
Preference number: 6 (lower is better)
Translates to: LRATLQCSLLLS*VSSQRMEVSSS
Trigger: AGACGAGCTGACCTCCATCCTCTGTGAGCTCACGCAGCTGAGCAGAAGCGAGCACTGCAAGGTTGCCCTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS GCA 72 bp ATCAGGACCTGTCTGGCTCTGAGGGCAACCTTGCAGTaGTCGCTTCTGCTCAGCTGCGTGAGCTCACAGAGG +
Preference number: 6 (lower is better)
Translates to: IRTCLALRATLQ*SLLLSCVSSQR
Trigger: CCTCTGTGAGCTCACGCAGCTGAGCAGAAGCGAGCACTGCAAGGTTGCCCTCAGAGCCAGACAGGTCCTGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS GCA 72 bp GGGGAGAAGCCACTGTCCATGAAGAGTTCTGTGCTGTaGCTCAGCAGGTCGGGGTTGGAGACACTGATGGGC +
Preference number: 6 (lower is better)
Translates to: GEKPLSMKSSVL*LSRSGLETLMG
Trigger: GCCCATCAGTGTCTCCAACCCCGACCTGCTGAGGCACAGCACAGAACTCTTCATGGACAGTGGCTTCTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS CCA 72 bp GACCCTGTTGCCTCCAAACCGAGTGACAAACTCGGCTaGGGACGCGACGGTGAAATCTCTGTGCAGGTCCAG +
Preference number: 6 (lower is better)
Translates to: DPVASKPSDKLG*GRDGEISVQVQ
Trigger: CTGGACCTGCACAGAGATTTCACCGTCGCGTCCCCAGCCGAGTTTGTCACTCGGTTTGGAGGCAACAGGGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
ENSMUST00000146841.2
CDS CCA 72 bp TCTGGGTTTTCGCTGGTGATCCTGGCTGCAATGACGTaGCCTCGGGCAATGGGAGGGCTCAAGGGGGTTTCA +
Preference number: 6 (lower is better)
Translates to: SGFSLVILAAMT*PRAMGGLKGVS
Trigger: TGAAACCCCCTTGAGCCCTCCCATTGCCCGAGGCCACGTCATTGCAGCCAGGATCACCAGCGAAAACCCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS CCA 72 bp ACCTTGTTGAGAGCACCGGCTCCGGTGAGGATGATGTaGGAGTTTTCCACCTGGATCACCCGCTGGCCAAGC +
Preference number: 6 (lower is better)
Translates to: TLLRAPAPVRMM*EFSTWITRWPS
Trigger: GCTTGGCCAGCGGGTGATCCAGGTGGAAAACTCCCACATCATCCTCACCGGAGCCGGTGCTCTCAACAAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS CAA 72 bp TCCTCTGGGTCCACCCAAGCCACTTGGAATATCTGTTaGATCTCCTCAGCCAGGCCCATACGGGCCCCGCTG +
Preference number: 6 (lower is better)
Translates to: SSGSTQATWNIC*ISSARPIRAPL
Trigger: CAGCGGGGCCCGTATGGGCCTGGCTGAGGAGATCAAACAGATATTCCAAGTGGCTTGGGTGGACCCAGAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS CAA 90 bp TGTCATTGGAAGACAGTGGGTTCCTCGGAGGCCTCTGGCATGAGCTaGGCAGGGAGTTCCTCTGCTGACTGGCGTCTCTGGGACCTCTGT +
Preference number: 6 (lower is better)
Translates to: CHWKTVGSSEASGMS*AGSSSADWRLWDLC
Trigger: ACAGAGGTCCCAGAGACGCCAGTCAGCAGAGGAACTCCCTGCCAAGCTCATGCCAGAGGCCTCCGAGGAACCCACTGTCTTCCAATGACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS CAA 90 bp ATTAGCATCTGGAACCTCTGGGCCCGGGGCGGCTGTCCAGTTGGTTaGGAGTTCTGGGGAGGGCCAGGTGTCATTGGAAGACAGTGGGTT +
Preference number: 6 (lower is better)
Translates to: ISIWNLWARGGCPVG*EFWGGPGVIGRQWV
Trigger: AACCCACTGTCTTCCAATGACACCTGGCCCTCCCCAGAACTCCAAACCAACTGGACAGCCGCCCCGGGCCCAGAGGTTCCAGATGCTAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS CAA 90 bp AACCCATTAGCATCTGGAACCTCTGGGCCCGGGGCGGCTGTCCAGTaGGTTTGGAGTTCTGGGGAGGGCCAGGTGTCATTGGAAGACAGT +
Preference number: 6 (lower is better)
Translates to: NPLASGTSGPGAAVQ*VWSSGEGQVSLEDS
Trigger: ACTGTCTTCCAATGACACCTGGCCCTCCCCAGAACTCCAAACCAACTGGACAGCCGCCCCGGGCCCAGAGGTTCCAGATGCTAATGGGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS CAA 90 bp GCAGCGATGCCATTGTTGGCGATGAGCACCTTCTCTATGACCCTGTaGCCTCCAAACCGAGTGACAAACTCGGCTGGGGACGCGACGGTG +
Preference number: 6 (lower is better)
Translates to: AAMPLLAMSTFSMTL*PPNRVTNSAGDATV
Trigger: CACCGTCGCGTCCCCAGCCGAGTTTGTCACTCGGTTTGGAGGCAACAGGGTCATAGAGAAGGTGCTCATCGCCAACAATGGCATCGCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
ENSMUST00000146841.2
CDS CAA 90 bp GCCCAGCGGCGGATGGAGCGCATACACTTGACCGCAGCGATGCCATaGTTGGCGATGAGCACCTTCTCTATGACCCTGTTGCCTCCAAAC +
Preference number: 6 (lower is better)
Translates to: AQRRMERIHLTAAMP*LAMSTFSMTLLPPN
Trigger: GTTTGGAGGCAACAGGGTCATAGAGAAGGTGCTCATCGCCAACAATGGCATCGCTGCGGTCAAGTGTATGCGCTCCATCCGCCGCTGGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
ENSMUST00000146841.2
CDS CAA 90 bp GGGCCGCACAGCTCATCTATCAGCATGGTCACCAGCTGGTTCTTCTaGGCCACCTGGGAGTGTGAGAAGATGCAGTCCAGCACCTGGGTC +
Preference number: 6 (lower is better)
Translates to: GPHSSSISMVTSWFF*ATWECEKMQSSTWV
Trigger: GACCCAGGTGCTGGACTGCATCTTCTCACACTCCCAGGTGGCCAAGAAGAACCAGCTGGTGACCATGCTGATAGATGAGCTGTGCGGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS CAA 90 bp TTGTGGGGATCCTCTGGGTCCACCCAAGCCACTTGGAATATCTGTTaGATCTCCTCAGCCAGGCCCATACGGGCCCCGCTGTTAGCTGCC +
Preference number: 6 (lower is better)
Translates to: LWGSSGSTQATWNIC*ISSARPIRAPLLAA
Trigger: GGCAGCTAACAGCGGGGCCCGTATGGGCCTGGCTGAGGAGATCAAACAGATATTCCAAGTGGCTTGGGTGGACCCAGAGGATCCCCACAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS CAA 90 bp CAGCGGCGGATGGAGCGCATACACTTGACCGCAGCGATGCCATTGTaGGCGATGAGCACCTTCTCTATGACCCTGTTGCCTCCAAACCGA +
Preference number: 6 (lower is better)
Translates to: QRRMERIHLTAAMPL*AMSTFSMTLLPPNR
Trigger: TCGGTTTGGAGGCAACAGGGTCATAGAGAAGGTGCTCATCGCCAACAATGGCATCGCTGCGGTCAAGTGTATGCGCTCCATCCGCCGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
ENSMUST00000146841.2
CDS TCA 72 bp ACTTCACCCGGCCGCTCTCCTGCACGTTCAGGGTCATaGTCATCTTCATCACCTCCATCTCCGCGTAGCTGC +
Preference number: 6 (lower is better)
Translates to: TSPGRSPARSGS*SSSSPPSPRSC
Trigger: GCAGCTACGCGGAGATGGAGGTGATGAAGATGATCATGACCCTGAACGTGCAGGAGAGCGGCCGGGTGAAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS GCA 72 bp GGCAGGTTGACATCTGCGATCATTTCAGTGCACGGATaGTCCACCTGCAGGCGTGGGTTCAGCTCCAGGAAG +
Preference number: 6 (lower is better)
Translates to: GRLTSAIISVHG*STCRRGFSSRK
Trigger: CTTCCTGGAGCTGAACCCACGCCTGCAGGTGGAGCATCCGTGCACTGAAATGATCGCAGATGTCAACCTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS GCA 72 bp AAAGCCCTCATCTGGGTTTTCGCTGGTGATCCTGGCTaGAATGACGTGGCCTCGGGCAATGGGAGGGCTCAA +
Preference number: 6 (lower is better)
Translates to: KALIWVFAGDPG*NDVASGNGRAQ
Trigger: TTGAGCCCTCCCATTGCCCGAGGCCACGTCATTGCAGCCAGGATCACCAGCGAAAACCCAGATGAGGGCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS GCA 72 bp CCTGGCCGCTTGATGTACTTCACCCGGCCGCTCTCCTaGACGTTCAGGGTCATGATCATCTTCATCACCTCC +
Preference number: 6 (lower is better)
Translates to: PGRLMYFTRPLS*TFRVMIIFITS
Trigger: GGAGGTGATGAAGATGATCATGACCCTGAACGTGCAGGAGAGCGGCCGGGTGAAGTACATCAAGCGGCCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS GCA 72 bp TGGGAAGTCGTACACATAGGTGGTCCCGAGGGACTGTaGCTGGAATCGCTTAGCCTGGAGCAGGTCCTTGGT +
Preference number: 6 (lower is better)
Translates to: WEVVHIGGPEGL*LESLSLEQVLG
Trigger: ACCAAGGACCTGCTCCAGGCTAAGCGATTCCAGGCACAGTCCCTCGGGACCACCTATGTGTACGACTTCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS GCA 72 bp TCATCTGGCACGGTGACGTGGGAGACCCCGTTGGTATaGATGATCTGCACGCCACCTAGCTGGTTGTTGGAC +
Preference number: 6 (lower is better)
Translates to: SSGTVTWETPLV*MICTPPSWLLD
Trigger: GTCCAACAACCAGCTAGGTGGCGTGCAGATCATGCATACCAACGGGGTCTCCCACGTCACCGTGCCAGATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS CCA 72 bp AGTTGGTTTGGAGTTCTGGGGAGGGCCAGGTGTCATTaGAAGACAGTGGGTTCCTCGGAGGCCTCTGGCATG +
Preference number: 6 (lower is better)
Translates to: SWFGVLGRARCH*KTVGSSEASGM
Trigger: CATGCCAGAGGCCTCCGAGGAACCCACTGTCTTCCAATGACACCTGGCCCTCCCCAGAACTCCAAACCAACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS CCA 72 bp AGGGTAAGGTTGGGATTTGCAGTGTCTGCGCTACGATaGTGGAGGCGATCTTGTCTCCCAGGGCCCACATGG +
Preference number: 6 (lower is better)
Translates to: RVRLGFAVSALR*WRRSCLPGPTW
Trigger: CCATGTGGGCCCTGGGAGACAAGATCGCCTCCACCATCGTAGCGCAGACACTGCAAATCCCAACCTTACCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS CCA 72 bp TCAAATCTCCTGAAGGCCACCATGGCCCCCATCCGCTaGCACAGTGGGGAGAAGCCACTGTCCATGAAGAGT +
Preference number: 6 (lower is better)
Translates to: SNLLKATMAPIR*HSGEKPLSMKS
Trigger: ACTCTTCATGGACAGTGGCTTCTCCCCACTGTGCCAGCGGATGGGGGCCATGGTGGCCTTCAGGAGATTTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS CCA 72 bp GATGTGCTTCTTGGACTGTACAAAGGCACGGAAGACTaGCACCAGCGCCTCGTCCTCCATGTGGTCGGCACA +
Preference number: 6 (lower is better)
Translates to: DVLLGLYKGTED*HQRLVLHVVGT
Trigger: TGTGCCGACCACATGGAGGACGAGGCGCTGGTGCCAGTCTTCCGTGCCTTTGTACAGTCCAAGAAGCACATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS CAA 72 bp CAGTTGGTTTGGAGTTCTGGGGAGGGCCAGGTGTCATaGGAAGACAGTGGGTTCCTCGGAGGCCTCTGGCAT +
Preference number: 6 (lower is better)
Translates to: QLVWSSGEGQVS*EDSGFLGGLWH
Trigger: ATGCCAGAGGCCTCCGAGGAACCCACTGTCTTCCAATGACACCTGGCCCTCCCCAGAACTCCAAACCAACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS CAA 72 bp TCGAAGTCATCTGGCACGGTGACGTGGGAGACCCCGTaGGTATGCATGATCTGCACGCCACCTAGCTGGTTG +
Preference number: 6 (lower is better)
Translates to: SKSSGTVTWETP*VCMICTPPSWL
Trigger: CAACCAGCTAGGTGGCGTGCAGATCATGCATACCAACGGGGTCTCCCACGTCACCGTGCCAGATGACTTCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS CAA 72 bp TTGATGTTTTCACGGATGGTGGAGCGCAAGCCGTCCTaGGCTGACCAGTGCTGTTCCAGCCACTGGACCACC +
Preference number: 6 (lower is better)
Translates to: LMFSRMVERKPS*ADQCCSSHWTT
Trigger: GGTGGTCCAGTGGCTGGAACAGCACTGGTCAGCCAAGGACGGCTTGCGCTCCACCATCCGTGAAAACATCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS CAA 90 bp TGCACTTGTCGGAAAAGCATCGGGAAGTCCTCTGCACTCTCAGCCTaGCGGATACCTTTCCCGCCTCCGCCTTCGGAGGCTTTGATCATC +
Preference number: 6 (lower is better)
Translates to: CTCRKSIGKSSALSA*RIPFPPPPSEALII
Trigger: GATGATCAAAGCCTCCGAAGGCGGAGGCGGGAAAGGTATCCGCAAGGCTGAGAGTGCAGAGGACTTCCCGATGCTTTTCCGACAAGTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS TCA 72 bp GTGCCGCCTCTGAATGGAACAGTCCCGTCCGAACAGTaGCACCGCGTTTCCATACTGATCTGCCAAGACCTG +
Preference number: 6 (lower is better)
Translates to: VPPLNGTVPSEQ*HRVSILICQDL
Trigger: CAGGTCTTGGCAGATCAGTATGGAAACGCGGTGTCACTGTTCGGACGGGACTGTTCCATTCAGAGGCGGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS TCA 72 bp ATCTCTGGACCAGCTGCACGATGCTCTGTGTGTTCATaGAGAAGACCTCTCGGTCCGCCTTACGCTGCAGGG +
Preference number: 6 (lower is better)
Translates to: ISGPAARCSVCS*RRPLGPPYAAG
Trigger: CCCTGCAGCGTAAGGCGGACCGAGAGGTCTTCTTCATGAACACACAGAGCATCGTGCAGCTGGTCCAGAGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS GCA 72 bp AGTAGGCGCGTGAGATTCAGGATCACTTGTGTTCAATaGAGCCTCCTGGGACAGAGTGCCCAGGCTAGCCCT +
Preference number: 6 (lower is better)
Translates to: SRRVRFRITCVQ*SLLGQSAQASP
Trigger: AGGGCTAGCCTGGGCACTCTGTCCCAGGAGGCTGCATTGAACACAAGTGATCCTGAATCTCACGCGCCTACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS GCA 72 bp CTTCCACTCCAGGGTAAGGTTGGGATTTGCAGTGTCTaGGCTACGATGGTGGAGGCGATCTTGTCTCCCAGG +
Preference number: 6 (lower is better)
Translates to: LPLQGKVGICSV*ATMVEAILSPR
Trigger: CCTGGGAGACAAGATCGCCTCCACCATCGTAGCGCAGACACTGCAAATCCCAACCTTACCCTGGAGTGGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS GCA 72 bp GTGAGACCGCTTCCACTCCAGGGTAAGGTTGGGATTTaGAGTGTCTGCGCTACGATGGTGGAGGCGATCTTG +
Preference number: 6 (lower is better)
Translates to: VRPLPLQGKVGI*SVCATMVEAIL
Trigger: CAAGATCGCCTCCACCATCGTAGCGCAGACACTGCAAATCCCAACCTTACCCTGGAGTGGAAGCGGTCTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS GCA 72 bp ACTCTGCACTTGTCGGAAAAGCATCGGGAAGTCCTCTaGACTCTCAGCCTTGCGGATACCTTTCCCGCCTCC +
Preference number: 6 (lower is better)
Translates to: TLHLSEKHREVL*TLSLADTFPAS
Trigger: GGAGGCGGGAAAGGTATCCGCAAGGCTGAGAGTGCAGAGGACTTCCCGATGCTTTTCCGACAAGTGCAGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS GCA 72 bp GGTGACCGTTTTCTCATAAGCCAGGGAAGCTTCTCCTaGAATCATGCCCGAGCCCCTCAGGTTCTCCACACC +
Preference number: 6 (lower is better)
Translates to: GDRFLISQGSFS*NHARAPQVLHT
Trigger: GGTGTGGAGAACCTGAGGGGCTCGGGCATGATTGCAGGAGAAGCTTCCCTGGCTTATGAGAAAACGGTCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS GCA 72 bp GTTCTCGGCCTCTCTTCACCAGATGGAGTCCAGACATaGTGGGCTTTCCTGCGAGCTCAGGGAAACAGACCT +
Preference number: 6 (lower is better)
Translates to: VLGLSSPDGVQT*WAFLRAQGNRP
Trigger: AGGTCTGTTTCCCTGAGCTCGCAGGAAAGCCCAGCATGTCTGGACTCCATCTGGTGAAGAGAGGCCGAGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000146841.2
CDS CCA 72 bp CTGCACTGTCCCCGAGCTTGGCTTAAAGCCCTCATCTaGGTTTTCGCTGGTGATCCTGGCTGCAATGACGTG +
Preference number: 6 (lower is better)
Translates to: LHCPRAWLKALI*VFAGDPGCNDV
Trigger: CACGTCATTGCAGCCAGGATCACCAGCGAAAACCCAGATGAGGGCTTTAAGCCAAGCTCGGGGACAGTGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS CCA 72 bp GCTGCGGAAGTTCAGCTCCTGCACTGTCCCCGAGCTTaGCTTAAAGCCCTCATCTGGGTTTTCGCTGGTGAT +
Preference number: 6 (lower is better)
Translates to: AAEVQLLHCPRA*LKALIWVFAGD
Trigger: ATCACCAGCGAAAACCCAGATGAGGGCTTTAAGCCAAGCTCGGGGACAGTGCAGGAGCTGAACTTCCGCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS CCA 72 bp CCCCCATCGTTCAGCCGGTGGGCATCGATCTCGATGTaGCAGCCGTTCATGATGAGGACAAACATAGTCAGG +
Preference number: 6 (lower is better)
Translates to: PPSFSRWASISM*QPFMMRTNIVR
Trigger: CCTGACTATGTTTGTCCTCATCATGAACGGCTGCCACATCGAGATCGATGCCCACCGGCTGAACGATGGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS CCA 72 bp ATCAGCATGGTCACCAGCTGGTTCTTCTTGGCCACCTaGGAGTGTGAGAAGATGCAGTCCAGCACCTGGGTC +
Preference number: 6 (lower is better)
Translates to: ISMVTSWFFLAT*ECEKMQSSTWV
Trigger: GACCCAGGTGCTGGACTGCATCTTCTCACACTCCCAGGTGGCCAAGAAGAACCAGCTGGTGACCATGCTGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS CCA 72 bp GGGCCGCACAGCTCATCTATCAGCATGGTCACCAGCTaGTTCTTCTTGGCCACCTGGGAGTGTGAGAAGATG +
Preference number: 6 (lower is better)
Translates to: GPHSSSISMVTS*FFLATWECEKM
Trigger: CATCTTCTCACACTCCCAGGTGGCCAAGAAGAACCAGCTGGTGACCATGCTGATAGATGAGCTGTGCGGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS CCA 72 bp ATGTGGTCGGCACACTGGATGGCCACATTCAGGATGTaGATGGGTTCCTCTCGGAGGCTCTTGCTGTCTTCC +
Preference number: 6 (lower is better)
Translates to: MWSAHWMATFRM*MGSSRRLLLSS
Trigger: GGAAGACAGCAAGAGCCTCCGAGAGGAACCCATCCACATCCTGAATGTGGCCATCCAGTGTGCCGACCACAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS CAA 72 bp AGGGAGCCCAGGATAAAGCTGGTCATCAGCTGTCTCTaGATGTGTGCCTGCTTCCTGTCCTCTCTGGAGGGG +
Preference number: 6 (lower is better)
Translates to: REPRIKLVISCL*MCACFLSSLEG
Trigger: CCCCTCCAGAGAGGACAGGAAGCAGGCACACATCAAGAGACAGCTGATGACCAGCTTTATCCTGGGCTCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS CAA 72 bp GCGATGAGGTGGTCCAGCCACCCCGTGTCGATATCGTaGTTCTGGAAGCTCTCGGTCTCCAGAAGGTTAACG +
Preference number: 6 (lower is better)
Translates to: AMRWSSHPVSIS*FWKLSVSRRLT
Trigger: CGTTAACCTTCTGGAGACCGAGAGCTTCCAGAACAACGATATCGACACGGGGTGGCTGGACCACCTCATCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS CAA 72 bp TACATGTCCTTCATGCCTCCGGAGAAGCCCCTCCAGTaGGCGAAGATCATGAGAGGCAGGCGCTCCTTGTTG +
Preference number: 6 (lower is better)
Translates to: YMSFMPPEKPLQ*AKIMRGRRSLL
Trigger: CAACAAGGAGCGCCTGCCTCTCATGATCTTCGCCAACTGGAGGGGCTTCTCCGGAGGCATGAAGGACATGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS CAA 90 bp ATCTGCTCATACATGTCCTTCATGCCTCCGGAGAAGCCCCTCCAGTaGGCGAAGATCATGAGAGGCAGGCGCTCCTTGTTGAAGTCCCTG +
Preference number: 6 (lower is better)
Translates to: ICSYMSFMPPEKPLQ*AKIMRGRRSLLKSL
Trigger: CAGGGACTTCAACAAGGAGCGCCTGCCTCTCATGATCTTCGCCAACTGGAGGGGCTTCTCCGGAGGCATGAAGGACATGTATGAGCAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS TCA 72 bp GATGGGGACCGGGCTGCGATTGTCCTTCGGTATAAATaGCAGCCATTCCAGAATGGTGCAGACCCCCTCGAA +
Preference number: 6 (lower is better)
Translates to: DGDRAAIVLRYK*QPFQNGADPLE
Trigger: TTCGAGGGGGTCTGCACCATTCTGGAATGGCTGTCATTTATACCGAAGGACAATCGCAGCCCGGTCCCCATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS TCA 72 bp AGGTGCGGGCAGTCTTCCATTCCAGCACATCAGAAATaGTTCCTTTCTCCAGCATGTGGCCCGGGGTGTCGT +
Preference number: 6 (lower is better)
Translates to: RCGQSSIPAHQK*FLSPACGPGCR
Trigger: ACGACACCCCGGGCCACATGCTGGAGAAAGGAATCATTTCTGATGTGCTGGAATGGAAGACTGCCCGCACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS GCA 72 bp ACAAACTCGGCTGGGGACGCGACGGTGAAATCTCTGTaGAGGTCCAGTTTCTTGTGTTCTCGGCCTCTCTTC +
Preference number: 6 (lower is better)
Translates to: TNSAGDATVKSL*RSSFLCSRPLF
Trigger: GAAGAGAGGCCGAGAACACAAGAAACTGGACCTGCACAGAGATTTCACCGTCGCGTCCCCAGCCGAGTTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
ENSMUST00000146841.2
CDS GCA 72 bp CTTCACCAGATGGAGTCCAGACATGCTGGGCTTTCCTaGGAGCTCAGGGAAACAGACCTTGCATTTGGCAGG +
Preference number: 6 (lower is better)
Translates to: LHQMESRHAGLS*ELRETDLAFGR
Trigger: CCTGCCAAATGCAAGGTCTGTTTCCCTGAGCTCGCAGGAAAGCCCAGCATGTCTGGACTCCATCTGGTGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000146841.2
CDS CCA 72 bp TCCAGTTTCTTGTGTTCTCGGCCTCTCTTCACCAGATaGAGTCCAGACATGCTGGGCCTCATAGTAGGCGCG +
Preference number: 6 (lower is better)
Translates to: SSFLCSRPLFTR*SPDMLGLIVGA
Trigger: CGCGCCTACTATGAGGCCCAGCATGTCTGGACTCCATCTGGTGAAGAGAGGCCGAGAACACAAGAAACTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS CCA 72 bp TCCAGCACATCAGAAATGATTCCTTTCTCCAGCATGTaGCCCGGGGTGTCGTGCAGGTCTGCGAACTGCACT +
Preference number: 6 (lower is better)
Translates to: SSTSEMIPFSSM*PGVSCRSANCT
Trigger: AGTGCAGTTCGCAGACCTGCACGACACCCCGGGCCACATGCTGGAGAAAGGAATCATTTCTGATGTGCTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS CAA 72 bp CGGATGGAGCGCATACACTTGACCGCAGCGATGCCATaGTTGGCGATGAGCACCTTCTCTATGACCCTGTTG +
Preference number: 6 (lower is better)
Translates to: RMERIHLTAAMP*LAMSTFSMTLL
Trigger: CAACAGGGTCATAGAGAAGGTGCTCATCGCCAACAATGGCATCGCTGCGGTCAAGTGTATGCGCTCCATCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
ENSMUST00000146841.2
CDS CAA 90 bp GTATCTAAATCCTTTGTGGGGATCCTCTGGGTCCACCCAAGCCACTaGGAATATCTGTTTGATCTCCTCAGCCAGGCCCATACGGGCCCC +
Preference number: 6 (lower is better)
Translates to: VSKSFVGILWVHPSH*EYLFDLLSQAHTGP
Trigger: GGGGCCCGTATGGGCCTGGCTGAGGAGATCAAACAGATATTCCAAGTGGCTTGGGTGGACCCAGAGGATCCCCACAAAGGATTTAGATAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS TCA 72 bp GATGGGTTCCTCTCGGAGGCTCTTGCTGTCTTCCTCTaGGTACAGGGAAGTGCACGCCTTACTGAAGAGAAG +
Preference number: 6 (lower is better)
Translates to: DGFLSEALAVFL*VQGSARLTEEK
Trigger: CTTCTCTTCAGTAAGGCGTGCACTTCCCTGTACTCAGAGGAAGACAGCAAGAGCCTCCGAGAGGAACCCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS GCA 72 bp CAAGAATTCCGTCATGCAGGTTCTGAACATCGCGTCTaGCACATTCAAGGCCCCACACACCACCCCAAGCAT +
Preference number: 6 (lower is better)
Translates to: QEFRHAGSEHRV*HIQGPTHHPKH
Trigger: ATGCTTGGGGTGGTGTGTGGGGCCTTGAATGTGGCAGACGCGATGTTCAGAACCTGCATGACGGAATTCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS CCA 72 bp AGGTGGTCCAGCCACCCCGTGTCGATATCGTTGTTCTaGAAGCTCTCGGTCTCCAGAAGGTTAACGAGATAC +
Preference number: 6 (lower is better)
Translates to: RWSSHPVSISLF*KLSVSRRLTRY
Trigger: GTATCTCGTTAACCTTCTGGAGACCGAGAGCTTCCAGAACAACGATATCGACACGGGGTGGCTGGACCACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS CCA 72 bp ACATTGGTCAGATTTTCCAAGACGCCGTGGAACACTTaGTGTAGCTTCTCCCCGAGGATGGGCAGAGTCTGC +
Preference number: 6 (lower is better)
Translates to: TLVRFSKTPWNT*CSFSPRMGRVC
Trigger: GCAGACTCTGCCCATCCTCGGGGAGAAGCTACACCAAGTGTTCCACGGCGTCTTGGAAAATCTGACCAATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS CCA 72 bp CCACTCATGACATTGGTCAGATTTTCCAAGACGCCGTaGAACACTTGGTGTAGCTTCTCCCCGAGGATGGGC +
Preference number: 6 (lower is better)
Translates to: PLMTLVRFSKTP*NTWCSFSPRMG
Trigger: GCCCATCCTCGGGGAGAAGCTACACCAAGTGTTCCACGGCGTCTTGGAAAATCTGACCAATGTCATGAGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS CCA 72 bp GCTCATCTATCAGCATGGTCACCAGCTGGTTCTTCTTaGCCACCTGGGAGTGTGAGAAGATGCAGTCCAGCA +
Preference number: 6 (lower is better)
Translates to: AHLSAWSPAGSS*PPGSVRRCSPA
Trigger: TGCTGGACTGCATCTTCTCACACTCCCAGGTGGCCAAGAAGAACCAGCTGGTGACCATGCTGATAGATGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS CCA 72 bp TGCAAGCATCCACCTGGGGTCGTAGGGAGCTTTGGTTaGGGTGAATTCAATTTCCCTGTCGATGGGGTCAGA +
Preference number: 6 (lower is better)
Translates to: CKHPPGVVGSFG*GEFNFPVDGVR
Trigger: TCTGACCCCATCGACAGGGAAATTGAATTCACCCCAACCAAAGCTCCCTACGACCCCAGGTGGATGCTTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS CCA 72 bp CTGGCTCAGGTAGGCCACGCAGTCCATGATGACCTCTaGATGTTCTTGGACCAGACTTTGGATGGTCTTGAG +
Preference number: 6 (lower is better)
Translates to: LAQVGHAVHDDL*MFLDQTLDGLE
Trigger: CTCAAGACCATCCAAAGTCTGGTCCAAGAACATCCAGAGGTCATCATGGACTGCGTGGCCTACCTGAGCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS CCA 72 bp TCCAGTTTCTTGTGTTCTCGGCCTCTCTTCACCAGATaGAGTCCAGACATGCTGGGCTTTCCTGCGAGCTCA +
Preference number: 6 (lower is better)
Translates to: SSFLCSRPLFTR*SPDMLGFPASS
Trigger: TGAGCTCGCAGGAAAGCCCAGCATGTCTGGACTCCATCTGGTGAAGAGAGGCCGAGAACACAAGAAACTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000146841.2
CDS CAA 72 bp TCTGAGGCTGAAAGGGACTCCTCGCTTGAAAGGAGATaGGCTTCCACCTTACTGTTGGTGAGCGGCTTCGAG +
Preference number: 6 (lower is better)
Translates to: SEAERDSSLERR*ASTLLLVSGFE
Trigger: CTCGAAGCCGCTCACCAACAGTAAGGTGGAAGCCAATCTCCTTTCAAGCGAGGAGTCCCTTTCAGCCTCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS CAA 72 bp GACGCGACGGTGAAATCTCTGTGCAGGTCCAGTTTCTaGTGTTCTCGGCCTCTCTTCACCAGATGGAGTCCA +
Preference number: 6 (lower is better)
Translates to: DATVKSLCRSSF*CSRPLFTRWSP
Trigger: TGGACTCCATCTGGTGAAGAGAGGCCGAGAACACAAGAAACTGGACCTGCACAGAGATTTCACCGTCGCGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
ENSMUST00000146841.2
CDS CAA 72 bp ATGGAGCGCATACACTTGACCGCAGCGATGCCATTGTaGGCGATGAGCACCTTCTCTATGACCCTGTTGCCT +
Preference number: 6 (lower is better)
Translates to: MERIHLTAAMPL*AMSTFSMTLLP
Trigger: AGGCAACAGGGTCATAGAGAAGGTGCTCATCGCCAACAATGGCATCGCTGCGGTCAAGTGTATGCGCTCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
ENSMUST00000146841.2
CDS CAA 72 bp AGCTCATCTATCAGCATGGTCACCAGCTGGTTCTTCTaGGCCACCTGGGAGTGTGAGAAGATGCAGTCCAGC +
Preference number: 6 (lower is better)
Translates to: SSSISMVTSWFF*ATWECEKMQSS
Trigger: GCTGGACTGCATCTTCTCACACTCCCAGGTGGCCAAGAAGAACCAGCTGGTGACCATGCTGATAGATGAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS CAA 72 bp GGGTCAGAAGGAGTGGTGATGGGGACCGGGCTGCGATaGTCCTTCGGTATAAATGACAGCCATTCCAGAATG +
Preference number: 6 (lower is better)
Translates to: GSEGVVMGTGLR*SFGINDSHSRM
Trigger: CATTCTGGAATGGCTGTCATTTATACCGAAGGACAATCGCAGCCCGGTCCCCATCACCACTCCTTCTGACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS TCA 72 bp TTGTTGTTATTGGGTCCTCCTGGGACAGGGACGTACTaGTCGGCCATCTTGATGTACTCTGCGTTGGCCTTC +
Preference number: 6 (lower is better)
Translates to: LLLLGPPGTGTY*SAILMYSALAF
Trigger: GAAGGCCAACGCAGAGTACATCAAGATGGCCGATCAGTACGTCCCTGTCCCAGGAGGACCCAATAACAACAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
ENSMUST00000146841.2
CDS TCA 72 bp TTTCCAGGGAGTGCAAGAATTCCGTCATGCAGGTTCTaGACATCGCGTCTGCCACATTCAAGGCCCCACACA +
Preference number: 6 (lower is better)
Translates to: FPGSARIPSCRF*TSRLPHSRPHT
Trigger: TGTGTGGGGCCTTGAATGTGGCAGACGCGATGTTCAGAACCTGCATGACGGAATTCTTGCACTCCCTGGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS TCA 72 bp GTTGGTGATGAAGAGGCGGATGGGGATGGCACTATCTaGGGTTGTCTGACGGATGTTGATCTTAACCTCGGC +
Preference number: 6 (lower is better)
Translates to: VGDEEADGDGTI*GCLTDVDLNLG
Trigger: GCCGAGGTTAAGATCAACATCCGTCAGACAACCTCAGATAGTGCCATCCCCATCCGCCTCTTCATCACCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS GCA 72 bp ATAAAGCTGGTCATCAGCTGTCTCTTGATGTGTGCCTaGTTCCTGTCCTCTCTGGAGGGGGATACTGTCCTC +
Preference number: 6 (lower is better)
Translates to: IKLVISCLLMCA*FLSSLEGDTVL
Trigger: GAGGACAGTATCCCCCTCCAGAGAGGACAGGAAGCAGGCACACATCAAGAGACAGCTGATGACCAGCTTTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS CCA 72 bp TTCTTCGGAGTCCGTAATCCACAAGGATGTGCTTCTTaGACTGTACAAAGGCACGGAAGACTGGCACCAGCG +
Preference number: 6 (lower is better)
Translates to: FFGVRNPQGCAS*TVQRHGRLAPA
Trigger: CGCTGGTGCCAGTCTTCCGTGCCTTTGTACAGTCCAAGAAGCACATCCTTGTGGATTACGGACTCCGAAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS CAA 72 bp GTAGGCCACGCAGTCCATGATGACCTCTGGATGTTCTaGGACCAGACTTTGGATGGTCTTGAGGACAGAGTC +
Preference number: 6 (lower is better)
Translates to: VGHAVHDDLWMF*DQTLDGLEDRV
Trigger: GACTCTGTCCTCAAGACCATCCAAAGTCTGGTCCAAGAACATCCAGAGGTCATCATGGACTGCGTGGCCTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS CAA 90 bp GAAAGGGACTCCTCGCTTGAAAGGAGATTGGCTTCCACCTTACTGTaGGTGAGCGGCTTCGAGTCTGTCATCTTCCCCCAGATTTTTAGC +
Preference number: 6 (lower is better)
Translates to: ERDSSLERRLASTLL*VSGFESVIFPQIFS
Trigger: GCTAAAAATCTGGGGGAAGATGACAGACTCGAAGCCGCTCACCAACAGTAAGGTGGAAGCCAATCTCCTTTCAAGCGAGGAGTCCCTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS TCA 72 bp CGCTTGAAAGGAGATTGGCTTCCACCTTACTGTTGGTaGGCGGCTTCGAGTCTGTCATCTTCCCCCAGATTT +
Preference number: 6 (lower is better)
Translates to: RLKGDWLPPYCW*AASSLSSSPRF
Trigger: AAATCTGGGGGAAGATGACAGACTCGAAGCCGCTCACCAACAGTAAGGTGGAAGCCAATCTCCTTTCAAGCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS TCA 72 bp TGTCTTCCTCTGAGTACAGGGAAGTGCACGCCTTACTaGAGAGAAGAGTGTCTGTCTGCACGTTGGCAAAGC +
Preference number: 6 (lower is better)
Translates to: CLPLSTGKCTPY*REECLSARWQS
Trigger: GCTTTGCCAACGTGCAGACAGACACTCTTCTCTTCAGTAAGGCGTGCACTTCCCTGTACTCAGAGGAAGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS GCA 72 bp TTCATTAGAAAGATCGGCGAGCCCGGAATCTCACTCTaGACTTGTCGGAAAAGCATCGGGAAGTCCTCTGCA +
Preference number: 6 (lower is better)
Translates to: FIRKIGEPGISL*TCRKSIGKSSA
Trigger: TGCAGAGGACTTCCCGATGCTTTTCCGACAAGTGCAGAGTGAGATTCCGGGCTCGCCGATCTTTCTAATGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS CAA 90 bp GGCCACGCAGTCCATGATGACCTCTGGATGTTCTTGGACCAGACTTaGGATGGTCTTGAGGACAGAGTCCCGCTTCAGATAATTGATGTT +
Preference number: 6 (lower is better)
Translates to: GHAVHDDLWMFLDQT*DGLEDRVPLQIIDV
Trigger: AACATCAATTATCTGAAGCGGGACTCTGTCCTCAAGACCATCCAAAGTCTGGTCCAAGAACATCCAGAGGTCATCATGGACTGCGTGGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS CCA 72 bp CTCTGTGTATGTCAGGATATCTTTGGGGTACTTCTCTaGGGAGCCCCACAGTTTAAAGAGAGCCTGCCTGAA +
Preference number: 6 (lower is better)
Translates to: LCVCQDIFGVLL*GAPQFKESLPE
Trigger: TTCAGGCAGGCTCTCTTTAAACTGTGGGGCTCCCCAGAGAAGTACCCCAAAGATATCCTGACATACACAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS CCA 72 bp GGCTTTCCCCAGCTGTCCCACGAGCTTCTTACACACTaGGTCTATCCTCCTTATGGTTTTCACCAGATCTTT +
Preference number: 6 (lower is better)
Translates to: GFPQLSHELLTH*VYPPYGFHQIF
Trigger: AAAGATCTGGTGAAAACCATAAGGAGGATAGACCCAGTGTGTAAGAAGCTCGTGGGACAGCTGGGGAAAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS GCA 72 bp GAAGTGCACGCCTTACTGAAGAGAAGAGTGTCTGTCTaGACGTTGGCAAAGCAGGAGATGACTTCATCAAAG +
Preference number: 6 (lower is better)
Translates to: EVHALLKRRVSV*TLAKQEMTSSK
Trigger: CTTTGATGAAGTCATCTCCTGCTTTGCCAACGTGCAGACAGACACTCTTCTCTTCAGTAAGGCGTGCACTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS CAA 72 bp CACGCCTTACTGAAGAGAAGAGTGTCTGTCTGCACGTaGGCAAAGCAGGAGATGACTTCATCAAAGTTCCTG +
Preference number: 6 (lower is better)
Translates to: HALLKRRVSVCT*AKQEMTSSKFL
Trigger: CAGGAACTTTGATGAAGTCATCTCCTGCTTTGCCAACGTGCAGACAGACACTCTTCTCTTCAGTAAGGCGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS CAA 72 bp CGCTCTGAACGTGAAGAACTTGGGGAATTCTCTCTCTaGGGCAACAAGGAATGTGATTCTTCGGAGTCCGTA +
Preference number: 6 (lower is better)
Translates to: RSEREELGEFSL*GNKECDSSESV
Trigger: TACGGACTCCGAAGAATCACATTCCTTGTTGCCCAAGAGAGAGAATTCCCCAAGTTCTTCACGTTCAGAGCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS CAA 90 bp AGGGAAGTGCACGCCTTACTGAAGAGAAGAGTGTCTGTCTGCACGTaGGCAAAGCAGGAGATGACTTCATCAAAGTTCCTGGTGAATTCT +
Preference number: 6 (lower is better)
Translates to: REVHALLKRRVSVCT*AKQEMTSSKFLVNS
Trigger: AGAATTCACCAGGAACTTTGATGAAGTCATCTCCTGCTTTGCCAACGTGCAGACAGACACTCTTCTCTTCAGTAAGGCGTGCACTTCCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS TCA 72 bp ACTTGGGGAATTCTCTCTCTTGGGCAACAAGGAATGTaGTTCTTCGGAGTCCGTAATCCACAAGGATGTGCT +
Preference number: 6 (lower is better)
Translates to: TWGILSLGQQGM*FFGVRNPQGCA
Trigger: AGCACATCCTTGTGGATTACGGACTCCGAAGAATCACATTCCTTGTTGCCCAAGAGAGAGAATTCCCCAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS TCA 72 bp ATCCCATGCAGGCTACCTTGCTTGTTGCCAAAGGAATaGAACATGATATTTCCGGATCTGGAGTCCGTCACT +
Preference number: 6 (lower is better)
Translates to: IPCRLPCLLPKE*NMIFPDLESVT
Trigger: AGTGACGGACTCCAGATCCGGAAATATCATGTTTCATTCCTTTGGCAACAAGCAAGGTAGCCTGCATGGGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS CCA 72 bp GAAAGTATTAGTTTCTTGAGATTTTCTGGGCAGAACTaGTGGCCGTACATGTCGATGGCGGACAGGAAGATG +
Preference number: 6 (lower is better)
Translates to: ESISFLRFSGQN*WPYMSMADRKM
Trigger: CATCTTCCTGTCCGCCATCGACATGTACGGCCACCAGTTCTGCCCAGAAAATCTCAAGAAACTAATACTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8
CDS CCA 72 bp CAGGTACAGGTATCTAAATCCTTTGTGGGGATCCTCTaGGTCCACCCAAGCCACTTGGAATATCTGTTTGAT +
Preference number: 6 (lower is better)
Translates to: QVQVSKSFVGIL*VHPSHLEYLFD
Trigger: ATCAAACAGATATTCCAAGTGGCTTGGGTGGACCCAGAGGATCCCCACAAAGGATTTAGATACCTGTACCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031583.15
ENSMUST00000102582.8