Pregenerated sensors for ACAA2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000036880Ensembl transcript IDs: ENSMUST00000041053.11, ENSMUST00000237306.2
Found 69 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GCCTCATCAAGGCTTGGTCACATACAATCACTGTCTCAGCAGGGCTaGCTCGAAGGTCTCCTGTGTTCCGTGGCCTGGCCCAGTAAGTGT | + |
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Preference number: 1 (lower is better) Translates to: ASSRLGHIQSLSQQG*LEGLLCSVAWPSKC Trigger: ACACTTACTGGGCCAGGCCACGGAACACAGGAGACCTTCGAGTCAGCCCTGCTGAGACAGTGATTGTATGTGACCAAGCCTTGATGAGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041053.11 |
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| 3UTR TCA 90 bp | TATTCAGTTTGTATTACTCCATGGAAGGCATACAGTGGTGACTACTaGCAGATACCATTTCTCTTAAGGCCTCCGATGGTTGGTGTTTTT | + |
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Preference number: 1 (lower is better) Translates to: YSVCITPWKAYSGDY*QIPFLLRPPMVGVF Trigger: AAAAACACCAACCATCGGAGGCCTTAAGAGAAATGGTATCTGTCAGTAGTCACCACTGTATGCCTTCCATGGAGTAATACAAACTGAATA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041053.11 ENSMUST00000237306.2 |
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| 3UTR-3UTR GCA 90 bp | CTACTGACAGATACCATTTCTCTTAAGGCCTCCGATGGTTGGTGTTTTTATTCTGTAGACAGAACCCAATaGATCTTGCCTCATCAAGGC | + |
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Preference number: 2 (lower is better) Translates to: LLTDTISLKASDGWCFYSVDRTQ*ILPHQG Trigger: GCCTTGATGAGGCAAGATGCATTGGGTTCTGTCTAC...AGAATAAAAACACCAACCATCGGAGGCCTTAAGAGAAATGGTATCTGTCAGTAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041053.11 ENSMUST00000237306.2 |
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| 3UTR-3UTR GCA 90 bp | GTTAAGGCAACATTTATTCAGTTTGTATTACTCCATGGAAGGCATACAGTGGTGGAACCCAATGCATCTTaGCTCATCAAGGCTTGGTCA | + |
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Preference number: 2 (lower is better) Translates to: VKATFIQFVLLHGRHTVVEPNAS*LIKAWS Trigger: TGACCAAGCCTTGATGAGGCAAGATGCATTGGGTTC...CACCACTGTATGCCTTCCATGGAGTAATACAAACTGAATAAATGTTGCCTTAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041053.11 ENSMUST00000237306.2 |
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| 3UTR-3UTR GCA 90 bp | GCAACATTTATTCAGTTTGTATTACTCCATGGAAGGCATACAGTGGTGACTACTGAACCCAATGCATCTTaGCTCATCAAGGCTTGGTCA | + |
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Preference number: 2 (lower is better) Translates to: ATFIQFVLLHGRHTVVTTEPNAS*LIKAWS Trigger: TGACCAAGCCTTGATGAGGCAAGATGCATTGGGTTC...AGTAGTCACCACTGTATGCCTTCCATGGAGTAATACAAACTGAATAAATGTTGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041053.11 ENSMUST00000237306.2 |
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| 3UTR-3UTR GCA 90 bp | GAGTTAAGGCAACATTTATTCAGTTTGTATTACTCCATGGAAGGCATACAGTGGGTAGACAGAACCCAATaGATCTTGCCTCATCAAGGC | + |
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Preference number: 2 (lower is better) Translates to: ELRQHLFSLYYSMEGIQWVDRTQ*ILPHQG Trigger: GCCTTGATGAGGCAAGATGCATTGGGTTCTGTCTAC...CCACTGTATGCCTTCCATGGAGTAATACAAACTGAATAAATGTTGCCTTAACTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041053.11 ENSMUST00000237306.2 |
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| 3UTR CCA 72 bp | CTCAGCAGGGCTGACTCGAAGGTCTCCTGTGTTCCGTaGCCTGGCCCAGTAAGTGTGGGCAGTGTGCTTGTG | + |
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Preference number: 3 (lower is better) Translates to: LSRADSKVSCVP*PGPVSVGSVLV Trigger: CACAAGCACACTGCCCACACTTACTGGGCCAGGCCACGGAACACAGGAGACCTTCGAGTCAGCCCTGCTGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041053.11 |
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| 3UTR TCA 72 bp | AGGCTTGGTCACATACAATCACTGTCTCAGCAGGGCTaGCTCGAAGGTCTCCTGTGTTCCGTGGCCTGGCCC | + |
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Preference number: 3 (lower is better) Translates to: RLGHIQSLSQQG*LEGLLCSVAWP Trigger: GGGCCAGGCCACGGAACACAGGAGACCTTCGAGTCAGCCCTGCTGAGACAGTGATTGTATGTGACCAAGCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041053.11 |
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| 3UTR TCA 72 bp | TGTATTACTCCATGGAAGGCATACAGTGGTGACTACTaGCAGATACCATTTCTCTTAAGGCCTCCGATGGTT | + |
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Preference number: 3 (lower is better) Translates to: CITPWKAYSGDY*QIPFLLRPPMV Trigger: AACCATCGGAGGCCTTAAGAGAAATGGTATCTGTCAGTAGTCACCACTGTATGCCTTCCATGGAGTAATACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041053.11 ENSMUST00000237306.2 |
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| 3UTR GCA 72 bp | AACACGTCAGACAGGTATGAAGTAGACAGAACCCAATaGATCTTGCCTCATCAAGGCTTGGTCACATACAAT | + |
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Preference number: 3 (lower is better) Translates to: NTSDRYEVDRTQ*ILPHQGLVTYN Trigger: ATTGTATGTGACCAAGCCTTGATGAGGCAAGATGCATTGGGTTCTGTCTACTTCATACCTGTCTGACGTGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041053.11 ENSMUST00000237306.2 |
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| 3UTR TCA 72 bp | TTCAGTTTGTATTACTCCATGGAAGGCATACAGTGGTaGCTACTGACAGATACCATTTCTCTTAAGGCCTCC | + |
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Preference number: 3 (lower is better) Translates to: FSLYYSMEGIQW*LLTDTISLKAS Trigger: GGAGGCCTTAAGAGAAATGGTATCTGTCAGTAGTCACCACTGTATGCCTTCCATGGAGTAATACAAACTGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041053.11 ENSMUST00000237306.2 |
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| CDS-3UTR CCA 90 bp | GGTCTCCTGTGTTCCGTGGCCTGGCCCAGTAAGTGTGGGCAGTGTGCTTGTGATTGCTCCAGGGTGGTTTaGGGTCGAGCGTGCTCGTCC | + |
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Preference number: 4 (lower is better) Translates to: GLLCSVAWPSKCGQCACDCSRVV*GRACSS Trigger: GGACGAGCACGCTCGACCCCAAACCACCCTGGAGCA...ATCACAAGCACACTGCCCACACTTACTGGGCCAGGCCACGGAACACAGGAGACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041053.11 |
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| CDS-3UTR TCA 90 bp | TGTCTCAGCAGGGCTGACTCGAAGGTCTCCTGTGTTCCGTGGCCTGGCCCAGTAGAACCAGGTGTGCGGTaGTTCTGGAGCCAGATCCTC | + |
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Preference number: 4 (lower is better) Translates to: CLSRADSKVSCVPWPGPVEPGVR*FWSQIL Trigger: GAGGATCTGGCTCCAGAATCACCGCACACCTGGTTC...TACTGGGCCAGGCCACGGAACACAGGAGACCTTCGAGTCAGCCCTGCTGAGACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041053.11 |
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| CDS-3UTR CCA 90 bp | AGCAGGGCTGACTCGAAGGTCTCCTGTGTTCCGTGGCCTGGCCCAGTAAGTGTGCCGCTCACGATGGACTaGAAACCAGAGCCACAGAGC | + |
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Preference number: 4 (lower is better) Translates to: SRADSKVSCVPWPGPVSVPLTMD*KPEPQS Trigger: GCTCTGTGGCTCTGGTTTCCAGTCCATCGTGAGCGG...CACACTTACTGGGCCAGGCCACGGAACACAGGAGACCTTCGAGTCAGCCCTGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041053.11 |
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| CDS-3UTR TCA 90 bp | TGTCTCAGCAGGGCTGACTCGAAGGTCTCCTGTGTTCCGTGGCCTGGCCCAGTAGCTTTCCACCTCTGCTaGGACTGCAAGGCGTATCTG | + |
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Preference number: 4 (lower is better) Translates to: CLSRADSKVSCVPWPGPVAFHLC*DCKAYL Trigger: CAGATACGCCTTGCAGTCTCAGCAGAGGTGGAAAGC...TACTGGGCCAGGCCACGGAACACAGGAGACCTTCGAGTCAGCCCTGCTGAGACA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041053.11 |
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| CDS-3UTR CCA 90 bp | GGTCTCCTGTGTTCCGTGGCCTGGCCCAGTAAGTGTGGGCAGTGTGCTTGTGATGCTCGTCCACTTGCATaGTCTGTTTGCCTTTCTTCG | + |
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Preference number: 4 (lower is better) Translates to: GLLCSVAWPSKCGQCACDARPLA*SVCLSS Trigger: CGAAGAAAGGCAAACAGACCATGCAAGTGGACGAGC...ATCACAAGCACACTGCCCACACTTACTGGGCCAGGCCACGGAACACAGGAGACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041053.11 |
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| CDS-3UTR CCA 90 bp | GGTCTCCTGTGTTCCGTGGCCTGGCCCAGTAAGTGTGGGCAGTGTGCTTGTGATCGCCTCCACTCACATTaGTTTTGCTGGGGTCAAGAT | + |
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Preference number: 4 (lower is better) Translates to: GLLCSVAWPSKCGQCACDRLHSH*FCWGQD Trigger: ATCTTGACCCCAGCAAAACCAATGTGAGTGGAGGCG...ATCACAAGCACACTGCCCACACTTACTGGGCCAGGCCACGGAACACAGGAGACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041053.11 |
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| CDS-3UTR CCA 90 bp | GGTCTCCTGTGTTCCGTGGCCTGGCCCAGTAAGTGTGGGCAGTGTGCTTGTGATATTGATAGCAGGGACTaGACCAATACCCATGATAGT | + |
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Preference number: 4 (lower is better) Translates to: GLLCSVAWPSKCGQCACDIDSRD*TNTHDS Trigger: ACTATCATGGGTATTGGTCCAGTCCCTGCTATCAAT...ATCACAAGCACACTGCCCACACTTACTGGGCCAGGCCACGGAACACAGGAGACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041053.11 |
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| CDS-3UTR CCA 90 bp | CTACTGACAGATACCATTTCTCTTAAGGCCTCCGATGGTTGGTGTTTTTATTCTGGCCCCAGTCTCTGTTaGGACTCCCACTCGCAAACC | + |
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Preference number: 4 (lower is better) Translates to: LLTDTISLKASDGWCFYSGPSLC*DSHSQT Trigger: GGTTTGCGAGTGGGAGTCCCAACAGAGACTGGGGCC...AGAATAAAAACACCAACCATCGGAGGCCTTAAGAGAAATGGTATCTGTCAGTAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041053.11 |
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| CDS-3UTR TCA 90 bp | GTTAAGGCAACATTTATTCAGTTTGTATTACTCCATGGAAGGCATACAGTGGTGTGGCAGAGAAGTCCTTaGGAAGGCCCCCGTAAGCTC | + |
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Preference number: 4 (lower is better) Translates to: VKATFIQFVLLHGRHTVVWQRSP*EGPRKL Trigger: GAGCTTACGGGGGCCTTCTCAAGGACTTCTCTGCCA...CACCACTGTATGCCTTCCATGGAGTAATACAAACTGAATAAATGTTGCCTTAAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041053.11 |
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| CDS-3UTR TCA 90 bp | GAGTTAAGGCAACATTTATTCAGTTTGTATTACTCCATGGAAGGCATACAGTGGCGAAGCGCACATTTCTaGCACAGTAGGGGGACTGGC | + |
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Preference number: 4 (lower is better) Translates to: ELRQHLFSLYYSMEGIQWRSAHF*HSRGTG Trigger: GCCAGTCCCCCTACTGTGTCAGAAATGTGCGCTTCG...CCACTGTATGCCTTCCATGGAGTAATACAAACTGAATAAATGTTGCCTTAACTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041053.11 |
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| CDS-3UTR CCA 90 bp | GGCAACATTTATTCAGTTTGTATTACTCCATGGAAGGCATACAGTGGTGACTACGACATCCGCTCACGATaGACTGGAAACCAGAGCCAC | + |
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Preference number: 4 (lower is better) Translates to: GNIYSVCITPWKAYSGDYDIRSR*TGNQSH Trigger: GTGGCTCTGGTTTCCAGTCCATCGTGAGCGGATGTC...GTAGTCACCACTGTATGCCTTCCATGGAGTAATACAAACTGAATAAATGTTGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041053.11 |
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| CDS-3UTR CCA 90 bp | GAGTTAAGGCAACATTTATTCAGTTTGTATTACTCCATGGAAGGCATACAGTGGGTCTCCTGTGTTCCGTaGCCTGGCCCAGTAAGTGTG | + |
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Preference number: 4 (lower is better) Translates to: ELRQHLFSLYYSMEGIQWVSCVP*PGPVSV Trigger: CACACTTACTGGGCCAGGCCACGGAACACAGGAGAC...CCACTGTATGCCTTCCATGGAGTAATACAAACTGAATAAATGTTGCCTTAACTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237306.2 |
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| CDS-3UTR TCA 90 bp | GTTAAGGCAACATTTATTCAGTTTGTATTACTCCATGGAAGGCATACAGTGGTGTGGGCAGTGTGCTTGTaGTGCCTTCAGGCTGTGTTC | + |
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Preference number: 4 (lower is better) Translates to: VKATFIQFVLLHGRHTVVWAVCL*CLQAVF Trigger: GAACACAGCCTGAAGGCATCACAAGCACACTGCCCA...CACCACTGTATGCCTTCCATGGAGTAATACAAACTGAATAAATGTTGCCTTAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237306.2 |
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| CDS-3UTR GCA 90 bp | CTACTGACAGATACCATTTCTCTTAAGGCCTCCGATGGTTGGTGTTTTTATTCTTTTCAGGTGGAACTTTaGCAGCAGACAGAGCAGCCC | + |
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Preference number: 4 (lower is better) Translates to: LLTDTISLKASDGWCFYSFQVEL*QQTEQP Trigger: GGGCTGCTCTGTCTGCTGGCAAAGTTCCACCTGAAA...AGAATAAAAACACCAACCATCGGAGGCCTTAAGAGAAATGGTATCTGTCAGTAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041053.11 |
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| CDS-3UTR GCA 90 bp | CTACTGACAGATACCATTTCTCTTAAGGCCTCCGATGGTTGGTGTTTTTATTCTTGCAGCAAGGTTCTCTaGAGTCATTCCCATGGGCAG | + |
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Preference number: 4 (lower is better) Translates to: LLTDTISLKASDGWCFYSCSKVL*SHSHGQ Trigger: CTGCCCATGGGAATGACTGCAGAGAACCTTGCTGCA...AGAATAAAAACACCAACCATCGGAGGCCTTAAGAGAAATGGTATCTGTCAGTAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041053.11 ENSMUST00000237306.2 |
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| CDS-3UTR TCA 90 bp | GAGTTAAGGCAACATTTATTCAGTTTGTATTACTCCATGGAAGGCATACAGTGGACTTTCCACCTCTGCTaGGACTGCAAGGCGTATCTG | + |
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Preference number: 4 (lower is better) Translates to: ELRQHLFSLYYSMEGIQWTFHLC*DCKAYL Trigger: CAGATACGCCTTGCAGTCTCAGCAGAGGTGGAAAGT...CCACTGTATGCCTTCCATGGAGTAATACAAACTGAATAAATGTTGCCTTAACTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237306.2 |
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| CDS-3UTR GCA 90 bp | GCAACATTTATTCAGTTTGTATTACTCCATGGAAGGCATACAGTGGTGACTACTTGCAGCAAGGTTCTCTaGAGTCATTCCCATGGGCAG | + |
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Preference number: 4 (lower is better) Translates to: ATFIQFVLLHGRHTVVTTCSKVL*SHSHGQ Trigger: CTGCCCATGGGAATGACTGCAGAGAACCTTGCTGCA...AGTAGTCACCACTGTATGCCTTCCATGGAGTAATACAAACTGAATAAATGTTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041053.11 ENSMUST00000237306.2 |
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| CDS-3UTR GCA 90 bp | GAGTTAAGGCAACATTTATTCAGTTTGTATTACTCCATGGAAGGCATACAGTGGCTCATGAACCAGGTGTaGGGTGATTCTGGAGCCAGA | + |
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Preference number: 4 (lower is better) Translates to: ELRQHLFSLYYSMEGIQWLMNQV*GDSGAR Trigger: TCTGGCTCCAGAATCACCGCACACCTGGTTCATGAG...CCACTGTATGCCTTCCATGGAGTAATACAAACTGAATAAATGTTGCCTTAACTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041053.11 |
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| CDS-3UTR GCA 90 bp | GGCAACATTTATTCAGTTTGTATTACTCCATGGAAGGCATACAGTGGTGACTACCCCAGCTTTCTTCAATaGTCCATTGATAGCAGGGAC | + |
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Preference number: 4 (lower is better) Translates to: GNIYSVCITPWKAYSGDYPSFLQ*SIDSRD Trigger: GTCCCTGCTATCAATGGAGCATTGAAGAAAGCTGGG...GTAGTCACCACTGTATGCCTTCCATGGAGTAATACAAACTGAATAAATGTTGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041053.11 |
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| CDS-3UTR CCA 90 bp | GAGTTAAGGCAACATTTATTCAGTTTGTATTACTCCATGGAAGGCATACAGTGGCTTCAGGCTGTGTTCTaGATGATCAAGGCGATGCCT | + |
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Preference number: 4 (lower is better) Translates to: ELRQHLFSLYYSMEGIQWLQAVF*MIKAMP Trigger: AGGCATCGCCTTGATCATCCAGAACACAGCCTGAAG...CCACTGTATGCCTTCCATGGAGTAATACAAACTGAATAAATGTTGCCTTAACTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237306.2 |
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| CDS-3UTR CCA 90 bp | GAGTTAAGGCAACATTTATTCAGTTTGTATTACTCCATGGAAGGCATACAGTGGATCGATGGTTTCAGGTaGAACTTTGCCAGCAGACAG | + |
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Preference number: 4 (lower is better) Translates to: ELRQHLFSLYYSMEGIQWIDGFR*NFASRQ Trigger: CTGTCTGCTGGCAAAGTTCCACCTGAAACCATCGAT...CCACTGTATGCCTTCCATGGAGTAATACAAACTGAATAAATGTTGCCTTAACTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041053.11 |
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| CDS-3UTR CCA 90 bp | GGAGTTAAGGCAACATTTATTCAGTTTGTATTACTCCATGGAAGGCATACAGTGCAGACAGAGCAGCCCTaGCAGCAAATTCAGTTAAAT | + |
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Preference number: 4 (lower is better) Translates to: GVKATFIQFVLLHGRHTVQTEQP*QQIQLN Trigger: ATTTAACTGAATTTGCTGCCAGGGCTGCTCTGTCTG...CACTGTATGCCTTCCATGGAGTAATACAAACTGAATAAATGTTGCCTTAACTCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041053.11 |
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| CDS-3UTR TCA 90 bp | GTTAAGGCAACATTTATTCAGTTTGTATTACTCCATGGAAGGCATACAGTGGTGAAGTATCTTCCAGCTTaGGATCTAATCCAAATTTGG | + |
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Preference number: 4 (lower is better) Translates to: VKATFIQFVLLHGRHTVVKYLPA*DLIQIW Trigger: CCAAATTTGGATTAGATCTCAAGCTGGAAGATACTT...CACCACTGTATGCCTTCCATGGAGTAATACAAACTGAATAAATGTTGCCTTAAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041053.11 |
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| CDS-3UTR GCA 90 bp | GCAACATTTATTCAGTTTGTATTACTCCATGGAAGGCATACAGTGGTGACTACTTGTCACAGTCTTCTCTaGTTATGTTGTATTTTGCAG | + |
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Preference number: 4 (lower is better) Translates to: ATFIQFVLLHGRHTVVTTCHSLL*LCCILQ Trigger: CTGCAAAATACAACATAAGCAGAGAAGACTGTGACA...AGTAGTCACCACTGTATGCCTTCCATGGAGTAATACAAACTGAATAAATGTTGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041053.11 ENSMUST00000237306.2 |
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| CDS-3UTR GCA 90 bp | GGAGTTAAGGCAACATTTATTCAGTTTGTATTACTCCATGGAAGGCATACAGTGTGTCACAGTCTTCTCTaGTTATGTTGTATTTTGCAG | + |
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Preference number: 4 (lower is better) Translates to: GVKATFIQFVLLHGRHTVCHSLL*LCCILQ Trigger: CTGCAAAATACAACATAAGCAGAGAAGACTGTGACA...CACTGTATGCCTTCCATGGAGTAATACAAACTGAATAAATGTTGCCTTAACTCC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041053.11 ENSMUST00000237306.2 |
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| CDS GCA 90 bp | TATGATGACGGCCCCAGCACCGTCAGACACCCCCGAGGCGTTCCCTaGTGTGACTGTCCCGTCTTTCTTGAACACGGACGGGAGCTTCTG | + |
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Preference number: 5 (lower is better) Translates to: YDDGPSTVRHPRGVP*CDCPVFLEHGRELL Trigger: CAGAAGCTCCCGTCCGTGTTCAAGAAAGACGGGACAGTCACAGCAGGGAACGCCTCGGGGGTGTCTGACGGTGCTGGGGCCGTCATCATA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041053.11 |
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| CDS-3UTR CAA 90 bp | TGTCTCAGCAGGGCTGACTCGAAGGTCTCCTGTGTTCCGTGGCCTGGCCCAGTAGTTTCAGGTGGAACTTaGCCAGCAGACAGAGCAGCC | + |
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Preference number: 5 (lower is better) Translates to: CLSRADSKVSCVPWPGPVVSGGT*PADRAA Trigger: GGCTGCTCTGTCTGCTGGCAAAGTTCCACCTGAAAC...TACTGGGCCAGGCCACGGAACACAGGAGACCTTCGAGTCAGCCCTGCTGAGACA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041053.11 |
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| CDS GCA 90 bp | GTAAGGGCCCCAGTCTCTGTTGGGACTCCCACTCGCAAACCCACATaGCTCGCCAGGTATGCCGCATCTGAAGAGCTCTGCATGACATTG | + |
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Preference number: 5 (lower is better) Translates to: VRAPVSVGTPTRKPT*LARYAASEELCMTL Trigger: CAATGTCATGCAGAGCTCTTCAGATGCGGCATACCTGGCGAGGCATGTGGGTTTGCGAGTGGGAGTCCCAACAGAGACTGGGGCCCTTAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041053.11 |
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| CDS GCA 90 bp | GACGGGAGCTTCTGCAGTTGCTCCAGGGTGGTTTGGGGTCGAGCGTaGTCGTCCACTTGCATGGTCTGTTTGCCTTTCTTCGTCTTCACC | + |
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Preference number: 5 (lower is better) Translates to: DGSFCSCSRVVWGRA*SSTCMVCLPFFVFT Trigger: GGTGAAGACGAAGAAAGGCAAACAGACCATGCAAGTGGACGAGCACGCTCGACCCCAAACCACCCTGGAGCAACTGCAGAAGCTCCCGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041053.11 |
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| CDS GCA 90 bp | TGCAGTTGCTCCAGGGTGGTTTGGGGTCGAGCGTGCTCGTCCACTTaGATGGTCTGTTTGCCTTTCTTCGTCTTCACCTCAATGGGTGCC | + |
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Preference number: 5 (lower is better) Translates to: CSCSRVVWGRACSST*MVCLPFFVFTSMGA Trigger: GGCACCCATTGAGGTGAAGACGAAGAAAGGCAAACAGACCATGCAAGTGGACGAGCACGCTCGACCCCAAACCACCCTGGAGCAACTGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041053.11 |
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| CDS CCA 90 bp | TTCTTGAACACGGACGGGAGCTTCTGCAGTTGCTCCAGGGTGGTTTaGGGTCGAGCGTGCTCGTCCACTTGCATGGTCTGTTTGCCTTTC | + |
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Preference number: 5 (lower is better) Translates to: FLNTDGSFCSCSRVV*GRACSSTCMVCLPF Trigger: GAAAGGCAAACAGACCATGCAAGTGGACGAGCACGCTCGACCCCAAACCACCCTGGAGCAACTGCAGAAGCTCCCGTCCGTGTTCAAGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041053.11 |
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| CDS TCA 90 bp | CAGCCCTGGCAGCAAATTCAGTTAAATCGGTGGCAGAGAAGTCCTTaGGAAGGCCCCCGTAAGCTCCAAAGGGTGTTCGCTTCGCAGCGA | + |
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Preference number: 5 (lower is better) Translates to: QPWQQIQLNRWQRSP*EGPRKLQRVFASQR Trigger: TCGCTGCGAAGCGAACACCCTTTGGAGCTTACGGGGGCCTTCTCAAGGACTTCTCTGCCACCGATTTAACTGAATTTGCTGCCAGGGCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041053.11 |
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| CDS GCA 90 bp | CGCAAACCCACATGCCTCGCCAGGTATGCCGCATCTGAAGAGCTCTaGATGACATTGCCCACGATGACACTATCGATGGTTTCAGGTGGA | + |
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Preference number: 5 (lower is better) Translates to: RKPTCLARYAASEEL*MTLPTMTLSMVSGG Trigger: TCCACCTGAAACCATCGATAGTGTCATCGTGGGCAATGTCATGCAGAGCTCTTCAGATGCGGCATACCTGGCGAGGCATGTGGGTTTGCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041053.11 |
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| CDS CCA 90 bp | GCTCTGCATGACATTGCCCACGATGACACTATCGATGGTTTCAGGTaGAACTTTGCCAGCAGACAGAGCAGCCCTGGCAGCAAATTCAGT | + |
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Preference number: 5 (lower is better) Translates to: ALHDIAHDDTIDGFR*NFASRQSSPGSKFS Trigger: ACTGAATTTGCTGCCAGGGCTGCTCTGTCTGCTGGCAAAGTTCCACCTGAAACCATCGATAGTGTCATCGTGGGCAATGTCATGCAGAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041053.11 |
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| CDS-3UTR CAA 90 bp | GGAGTTAAGGCAACATTTATTCAGTTTGTATTACTCCATGGAAGGCATACAGTGTTGCTCCAGGGTGGTTaGGGGTCGAGCGTGCTCGTC | + |
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Preference number: 5 (lower is better) Translates to: GVKATFIQFVLLHGRHTVLLQGG*GSSVLV Trigger: GACGAGCACGCTCGACCCCAAACCACCCTGGAGCAA...CACTGTATGCCTTCCATGGAGTAATACAAACTGAATAAATGTTGCCTTAACTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041053.11 |
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| CDS TCA 90 bp | GCAGCAAGGTTCTCTGCAGTCATTCCCATGGGCAGCTTAACATGTTaGTCCGTTAATCCTGCCCACAAAGTATCTTCCAGCTTGAGATCT | + |
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Preference number: 5 (lower is better) Translates to: AARFSAVIPMGSLTC*SVNPAHKVSSSLRS Trigger: AGATCTCAAGCTGGAAGATACTTTGTGGGCAGGATTAACGGATCAACATGTTAAGCTGCCCATGGGAATGACTGCAGAGAACCTTGCTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041053.11 ENSMUST00000237306.2 |
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| CDS-3UTR CAA 90 bp | CTACTGACAGATACCATTTCTCTTAAGGCCTCCGATGGTTGGTGTTTTTATTCTAGCGTGCTCGTCCACTaGCATGGTCTGTTTGCCTTT | + |
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Preference number: 5 (lower is better) Translates to: LLTDTISLKASDGWCFYSSVLVH*HGLFAF Trigger: AAAGGCAAACAGACCATGCAAGTGGACGAGCACGCT...AGAATAAAAACACCAACCATCGGAGGCCTTAAGAGAAATGGTATCTGTCAGTAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041053.11 |
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| CDS-3UTR CAA 90 bp | GGAGTTAAGGCAACATTTATTCAGTTTGTATTACTCCATGGAAGGCATACAGTGTTCTTCAATGCTCCATaGATAGCAGGGACTGGACCA | + |
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Preference number: 5 (lower is better) Translates to: GVKATFIQFVLLHGRHTVFFNAP*IAGTGP Trigger: TGGTCCAGTCCCTGCTATCAATGGAGCATTGAAGAA...CACTGTATGCCTTCCATGGAGTAATACAAACTGAATAAATGTTGCCTTAACTCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041053.11 |
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| CDS GCA 72 bp | GGCCCCAGCACCGTCAGACACCCCCGAGGCGTTCCCTaGTGTGACTGTCCCGTCTTTCTTGAACACGGACGG | + |
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Preference number: 6 (lower is better) Translates to: GPSTVRHPRGVP*CDCPVFLEHGR Trigger: CCGTCCGTGTTCAAGAAAGACGGGACAGTCACAGCAGGGAACGCCTCGGGGGTGTCTGACGGTGCTGGGGCC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041053.11 |
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| CDS CAA 72 bp | CACGGACGGGAGCTTCTGCAGTTGCTCCAGGGTGGTTaGGGGTCGAGCGTGCTCGTCCACTTGCATGGTCTG | + |
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Preference number: 6 (lower is better) Translates to: HGRELLQLLQGG*GSSVLVHLHGL Trigger: CAGACCATGCAAGTGGACGAGCACGCTCGACCCCAAACCACCCTGGAGCAACTGCAGAAGCTCCCGTCCGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041053.11 |
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| CDS CCA 72 bp | ACAGAGCCTGTTGAGGGTAAGGGCCCCAGTCTCTGTTaGGACTCCCACTCGCAAACCCACATGCCTCGCCAG | + |
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Preference number: 6 (lower is better) Translates to: TEPVEGKGPSLC*DSHSQTHMPRQ Trigger: CTGGCGAGGCATGTGGGTTTGCGAGTGGGAGTCCCAACAGAGACTGGGGCCCTTACCCTCAACAGGCTCTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041053.11 |
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| CDS CCA 72 bp | ACGGACGGGAGCTTCTGCAGTTGCTCCAGGGTGGTTTaGGGTCGAGCGTGCTCGTCCACTTGCATGGTCTGT | + |
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Preference number: 6 (lower is better) Translates to: TDGSFCSCSRVV*GRACSSTCMVC Trigger: ACAGACCATGCAAGTGGACGAGCACGCTCGACCCCAAACCACCCTGGAGCAACTGCAGAAGCTCCCGTCCGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041053.11 |
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| CDS CAA 90 bp | TCAGACACCCCCGAGGCGTTCCCTGCTGTGACTGTCCCGTCTTTCTaGAACACGGACGGGAGCTTCTGCAGTTGCTCCAGGGTGGTTTGG | + |
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Preference number: 6 (lower is better) Translates to: SDTPEAFPAVTVPSF*NTDGSFCSCSRVVW Trigger: CCAAACCACCCTGGAGCAACTGCAGAAGCTCCCGTCCGTGTTCAAGAAAGACGGGACAGTCACAGCAGGGAACGCCTCGGGGGTGTCTGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041053.11 |
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| CDS GCA 72 bp | CCAGTCTCTGTTGGGACTCCCACTCGCAAACCCACATaGCTCGCCAGGTATGCCGCATCTGAAGAGCTCTGC | + |
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Preference number: 6 (lower is better) Translates to: PVSVGTPTRKPT*LARYAASEELC Trigger: GCAGAGCTCTTCAGATGCGGCATACCTGGCGAGGCATGTGGGTTTGCGAGTGGGAGTCCCAACAGAGACTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041053.11 |
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| CDS CAA 90 bp | CTGCAGTTGCTCCAGGGTGGTTTGGGGTCGAGCGTGCTCGTCCACTaGCATGGTCTGTTTGCCTTTCTTCGTCTTCACCTCAATGGGTGC | + |
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Preference number: 6 (lower is better) Translates to: LQLLQGGLGSSVLVH*HGLFAFLRLHLNGC Trigger: GCACCCATTGAGGTGAAGACGAAGAAAGGCAAACAGACCATGCAAGTGGACGAGCACGCTCGACCCCAAACCACCCTGGAGCAACTGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041053.11 |
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| CDS CAA 90 bp | TTTCTTGAACACGGACGGGAGCTTCTGCAGTTGCTCCAGGGTGGTTaGGGGTCGAGCGTGCTCGTCCACTTGCATGGTCTGTTTGCCTTT | + |
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Preference number: 6 (lower is better) Translates to: FLEHGRELLQLLQGG*GSSVLVHLHGLFAF Trigger: AAAGGCAAACAGACCATGCAAGTGGACGAGCACGCTCGACCCCAAACCACCCTGGAGCAACTGCAGAAGCTCCCGTCCGTGTTCAAGAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041053.11 |
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| CDS TCA 72 bp | TCGCAAACCCACATGCCTCGCCAGGTATGCCGCATCTaGAGAGCTCTGCATGACATTGCCCACGATGACACT | + |
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Preference number: 6 (lower is better) Translates to: SQTHMPRQVCRI*RALHDIAHDDT Trigger: AGTGTCATCGTGGGCAATGTCATGCAGAGCTCTTCAGATGCGGCATACCTGGCGAGGCATGTGGGTTTGCGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041053.11 |
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| CDS GCA 72 bp | GGGGTCGAGCGTGCTCGTCCACTTGCATGGTCTGTTTaGCTTTCTTCGTCTTCACCTCAATGGGTGCCATCT | + |
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Preference number: 6 (lower is better) Translates to: GVERARPLAWSV*LSSSSPQWVPS Trigger: AGATGGCACCCATTGAGGTGAAGACGAAGAAAGGCAAACAGACCATGCAAGTGGACGAGCACGCTCGACCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041053.11 |
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| CDS GCA 72 bp | TCCAGGGTGGTTTGGGGTCGAGCGTGCTCGTCCACTTaGATGGTCTGTTTGCCTTTCTTCGTCTTCACCTCA | + |
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Preference number: 6 (lower is better) Translates to: SRVVWGRACSST*MVCLPFFVFTS Trigger: TGAGGTGAAGACGAAGAAAGGCAAACAGACCATGCAAGTGGACGAGCACGCTCGACCCCAAACCACCCTGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041053.11 |
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| CDS GCA 72 bp | TTCTGCAGTTGCTCCAGGGTGGTTTGGGGTCGAGCGTaGTCGTCCACTTGCATGGTCTGTTTGCCTTTCTTC | + |
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Preference number: 6 (lower is better) Translates to: FCSCSRVVWGRA*SSTCMVCLPFF Trigger: GAAGAAAGGCAAACAGACCATGCAAGTGGACGAGCACGCTCGACCCCAAACCACCCTGGAGCAACTGCAGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041053.11 |
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| CDS CCA 72 bp | GGGTGGTTTGGGGTCGAGCGTGCTCGTCCACTTGCATaGTCTGTTTGCCTTTCTTCGTCTTCACCTCAATGG | + |
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Preference number: 6 (lower is better) Translates to: GWFGVERARPLA*SVCLSSSSPQW Trigger: CCATTGAGGTGAAGACGAAGAAAGGCAAACAGACCATGCAAGTGGACGAGCACGCTCGACCCCAAACCACCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041053.11 |
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| CDS CAA 90 bp | AGGGTGGTTTGGGGTCGAGCGTGCTCGTCCACTTGCATGGTCTGTTaGCCTTTCTTCGTCTTCACCTCAATGGGTGCCATCTCCTCATTG | + |
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Preference number: 6 (lower is better) Translates to: RVVWGRACSSTCMVC*PFFVFTSMGAISSL Trigger: CAATGAGGAGATGGCACCCATTGAGGTGAAGACGAAGAAAGGCAAACAGACCATGCAAGTGGACGAGCACGCTCGACCCCAAACCACCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041053.11 |
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| CDS CAA 72 bp | CCCACGATGACACTATCGATGGTTTCAGGTGGAACTTaGCCAGCAGACAGAGCAGCCCTGGCAGCAAATTCA | + |
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Preference number: 6 (lower is better) Translates to: PTMTLSMVSGGT*PADRAALAANS Trigger: TGAATTTGCTGCCAGGGCTGCTCTGTCTGCTGGCAAAGTTCCACCTGAAACCATCGATAGTGTCATCGTGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041053.11 |
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| CDS TCA 72 bp | CAGCAAATTCAGTTAAATCGGTGGCAGAGAAGTCCTTaGGAAGGCCCCCGTAAGCTCCAAAGGGTGTTCGCT | + |
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Preference number: 6 (lower is better) Translates to: QQIQLNRWQRSP*EGPRKLQRVFA Trigger: AGCGAACACCCTTTGGAGCTTACGGGGGCCTTCTCAAGGACTTCTCTGCCACCGATTTAACTGAATTTGCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041053.11 |
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| CDS CAA 90 bp | ATGACATTGCCCACGATGACACTATCGATGGTTTCAGGTGGAACTTaGCCAGCAGACAGAGCAGCCCTGGCAGCAAATTCAGTTAAATCG | + |
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Preference number: 6 (lower is better) Translates to: MTLPTMTLSMVSGGT*PADRAALAANSVKS Trigger: CGATTTAACTGAATTTGCTGCCAGGGCTGCTCTGTCTGCTGGCAAAGTTCCACCTGAAACCATCGATAGTGTCATCGTGGGCAATGTCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041053.11 |
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| CDS TCA 72 bp | TTCTCTGCAGTCATTCCCATGGGCAGCTTAACATGTTaGTCCGTTAATCCTGCCCACAAAGTATCTTCCAGC | + |
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Preference number: 6 (lower is better) Translates to: FSAVIPMGSLTC*SVNPAHKVSSS Trigger: GCTGGAAGATACTTTGTGGGCAGGATTAACGGATCAACATGTTAAGCTGCCCATGGGAATGACTGCAGAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041053.11 ENSMUST00000237306.2 |
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| CDS GCA 72 bp | GCTGAGACTGCAAGGCGTATCTGTCACAGTCTTCTCTaGTTATGTTGTATTTTGCAGCAAGGTTCTCTGCAG | + |
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Preference number: 6 (lower is better) Translates to: AETARRICHSLL*LCCILQQGSLQ Trigger: CTGCAGAGAACCTTGCTGCAAAATACAACATAAGCAGAGAAGACTGTGACAGATACGCCTTGCAGTCTCAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041053.11 ENSMUST00000237306.2 |
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| CDS TCA 72 bp | GATCCGTTAATCCTGCCCACAAAGTATCTTCCAGCTTaGGATCTAATCCAAATTTGGTTCCGAAGCGCACAT | + |
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Preference number: 6 (lower is better) Translates to: DPLILPTKYLPA*DLIQIWFRSAH Trigger: ATGTGCGCTTCGGAACCAAATTTGGATTAGATCTCAAGCTGGAAGATACTTTGTGGGCAGGATTAACGGATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041053.11 |
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