Pregenerated sensors for ACAA1B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000010651Ensembl transcript IDs: ENSMUST00000010795.5
Found 68 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CACCGTCCCACAGAAATGAATGTTGTCCTGTGGTCAAGCATAGCATaGACTGTCTTTGGTTCGACCGAGAGAACCGGATTGGATGCCCCA | + |
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Preference number: 1 (lower is better) Translates to: HRPTEMNVVLWSSIA*TVFGSTERTGLDAP Trigger: TGGGGCATCCAATCCGGTTCTCTCGGTCGAACCAAAGACAGTGCATGCTATGCTTGACCACAGGACAACATTCATTTCTGTGGGACGGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010795.5 |
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| 3UTR TCA 90 bp | ATTACATTTTCTAAATTAAAGTGCTGTGACACACCCCTCCACTGCTaGGTGTCCCACGCAGACGGCTTCTGTAGCGTCCCTCTCTGGACA | + |
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Preference number: 1 (lower is better) Translates to: ITFSKLKCCDTPLHC*VSHADGFCSVPLWT Trigger: TGTCCAGAGAGGGACGCTACAGAAGCCGTCTGCGTGGGACACTCAGCAGTGGAGGGGTGTGTCACAGCACTTTAATTTAGAAAATGTAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000010795.5 |
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| 3UTR-3UTR CCA 90 bp | CCGTCCCACAGAAATGAATGTTGTCCTGTGGTCAAGCATAGCATGCACTGTCTTCTCTGGACACCACTGTaGCACTCTCTGGGTTGTGCC | + |
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Preference number: 2 (lower is better) Translates to: PSHRNECCPVVKHSMHCLLWTPL*HSLGCA Trigger: GGCACAACCCAGAGAGTGCCACAGTGGTGTCCAGAG...AAGACAGTGCATGCTATGCTTGACCACAGGACAACATTCATTTCTGTGGGACGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010795.5 |
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| 3UTR-3UTR CCA 90 bp | TCCCACAGAAATGAATGTTGTCCTGTGGTCAAGCATAGCATGCACTGTCTTTGGCCGAGAGAACCGGATTaGATGCCCCAGTGCCCACGT | + |
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Preference number: 2 (lower is better) Translates to: SHRNECCPVVKHSMHCLWPREPD*MPQCPR Trigger: ACGTGGGCACTGGGGCATCCAATCCGGTTCTCTCGG...CCAAAGACAGTGCATGCTATGCTTGACCACAGGACAACATTCATTTCTGTGGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010795.5 |
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| 3UTR-3UTR CCA 90 bp | TCCCACAGAAATGAATGTTGTCCTGTGGTCAAGCATAGCATGCACTGTCTTTGGTGTAGCGTCCCTCTCTaGACACCACTGTGGCACTCT | + |
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Preference number: 2 (lower is better) Translates to: SHRNECCPVVKHSMHCLWCSVPL*TPLWHS Trigger: AGAGTGCCACAGTGGTGTCCAGAGAGGGACGCTACA...CCAAAGACAGTGCATGCTATGCTTGACCACAGGACAACATTCATTTCTGTGGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010795.5 |
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| 3UTR-3UTR GCA 90 bp | TCCCACAGAAATGAATGTTGTCCTGTGGTCAAGCATAGCATGCACTGTCTTTGGTTTTCTAAATTAAAGTaGTGTGACACACCCCTCCAC | + |
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Preference number: 2 (lower is better) Translates to: SHRNECCPVVKHSMHCLWFSKLK*CDTPLH Trigger: GTGGAGGGGTGTGTCACAGCACTTTAATTTAGAAAA...CCAAAGACAGTGCATGCTATGCTTGACCACAGGACAACATTCATTTCTGTGGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000010795.5 |
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| 3UTR CCA 72 bp | GACGGCTTCTGTAGCGTCCCTCTCTGGACACCACTGTaGCACTCTCTGGGTTGTGCCGCCTGCAGCCAGGCC | + |
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Preference number: 3 (lower is better) Translates to: DGFCSVPLWTPL*HSLGCAACSQA Trigger: GGCCTGGCTGCAGGCGGCACAACCCAGAGAGTGCCACAGTGGTGTCCAGAGAGGGACGCTACAGAAGCCGTC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010795.5 |
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| 3UTR CCA 72 bp | GTGTCCCACGCAGACGGCTTCTGTAGCGTCCCTCTCTaGACACCACTGTGGCACTCTCTGGGTTGTGCCGCC | + |
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Preference number: 3 (lower is better) Translates to: VSHADGFCSVPL*TPLWHSLGCAA Trigger: GGCGGCACAACCCAGAGAGTGCCACAGTGGTGTCCAGAGAGGGACGCTACAGAAGCCGTCTGCGTGGGACAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010795.5 |
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| 3UTR GCA 72 bp | ACAGAAATGAATGTTGTCCTGTGGTCAAGCATAGCATaGACTGTCTTTGGTTCGACCGAGAGAACCGGATTG | + |
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Preference number: 3 (lower is better) Translates to: TEMNVVLWSSIA*TVFGSTERTGL Trigger: CAATCCGGTTCTCTCGGTCGAACCAAAGACAGTGCATGCTATGCTTGACCACAGGACAACATTCATTTCTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010795.5 |
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| CDS-3UTR TCA 90 bp | CGTCCCACAGAAATGAATGTTGTCCTGTGGTCAAGCATAGCATGCACTGTCTTTGGCCGGCCGGCCAGGTaGCCCAGCACTACCTGCAGC | + |
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Preference number: 4 (lower is better) Translates to: RPTEMNVVLWSSIACTVFGRPAR*PSTTCS Trigger: GCTGCAGGTAGTGCTGGGTCACCTGGCCGGCCGGCC...AAAGACAGTGCATGCTATGCTTGACCACAGGACAACATTCATTTCTGTGGGACG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010795.5 |
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| CDS-3UTR TCA 90 bp | CGTCCCACAGAAATGAATGTTGTCCTGTGGTCAAGCATAGCATGCACTGTCTTTCGGGGGTGGTGTCCTTaGAGCAGCCACGGCTGGCGC | + |
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Preference number: 4 (lower is better) Translates to: RPTEMNVVLWSSIACTVFRGWCP*SSHGWR Trigger: GCGCCAGCCGTGGCTGCTTCAAGGACACCACCCCCG...AAAGACAGTGCATGCTATGCTTGACCACAGGACAACATTCATTTCTGTGGGACG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000010795.5 |
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| CDS-3UTR GCA 90 bp | CCGTCCCACAGAAATGAATGTTGTCCTGTGGTCAAGCATAGCATGCACTGTCTTTCGGAGGCCGAGGCCTaGAGGAAGCCAGCGGAGCAG | + |
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Preference number: 4 (lower is better) Translates to: PSHRNECCPVVKHSMHCLSEAEA*RKPAEQ Trigger: CTGCTCCGCTGGCTTCCTGCAGGCCTCGGCCTCCGA...AAGACAGTGCATGCTATGCTTGACCACAGGACAACATTCATTTCTGTGGGACGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010795.5 |
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| CDS-3UTR GCA 90 bp | CCGTCCCACAGAAATGAATGTTGTCCTGTGGTCAAGCATAGCATGCACTGTCTTGGCCCTGCATGGTGGTaGTGGGGCGGACACCCTCAT | + |
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Preference number: 4 (lower is better) Translates to: PSHRNECCPVVKHSMHCLGPAWW*WGGHPH Trigger: ATGAGGGTGTCCGCCCCAGCACCACCATGCAGGGCC...AAGACAGTGCATGCTATGCTTGACCACAGGACAACATTCATTTCTGTGGGACGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010795.5 |
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| CDS-3UTR CCA 90 bp | CGTCCCACAGAAATGAATGTTGTCCTGTGGTCAAGCATAGCATGCACTGTCTTTCCAGGCCCTGCATGGTaGTGCTGGGGCGGACACCCT | + |
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Preference number: 4 (lower is better) Translates to: RPTEMNVVLWSSIACTVFPGPAW*CWGGHP Trigger: AGGGTGTCCGCCCCAGCACCACCATGCAGGGCCTGG...AAAGACAGTGCATGCTATGCTTGACCACAGGACAACATTCATTTCTGTGGGACG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010795.5 |
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| CDS-3UTR CCA 90 bp | CGTCCCACAGAAATGAATGTTGTCCTGTGGTCAAGCATAGCATGCACTGTCTTTTGGCCAGGCCCTGCATaGTGGTGCTGGGGCGGACAC | + |
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Preference number: 4 (lower is better) Translates to: RPTEMNVVLWSSIACTVFWPGPA*WCWGGH Trigger: GTGTCCGCCCCAGCACCACCATGCAGGGCCTGGCCA...AAAGACAGTGCATGCTATGCTTGACCACAGGACAACATTCATTTCTGTGGGACG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000010795.5 |
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| CDS-3UTR GCA 90 bp | CGTCCCACAGAAATGAATGTTGTCCTGTGGTCAAGCATAGCATGCACTGTCTTTCGTGACAACCTGCCTTaGTCCCGTGCAGCCCAGGGG | + |
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Preference number: 4 (lower is better) Translates to: RPTEMNVVLWSSIACTVFRDNLP*SRAAQG Trigger: CCCCTGGGCTGCACGGGAGCAAGGCAGGTTGTCACG...AAAGACAGTGCATGCTATGCTTGACCACAGGACAACATTCATTTCTGTGGGACG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010795.5 |
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| CDS-3UTR GCA 90 bp | CGTCCCACAGAAATGAATGTTGTCCTGTGGTCAAGCATAGCATGCACTGTCTTTTCTGCTCTGGGCGCTTaGTGCCTTCTGCTGGGAGGC | + |
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Preference number: 4 (lower is better) Translates to: RPTEMNVVLWSSIACTVFSALGA*CLLLGG Trigger: GCCTCCCAGCAGAAGGCAGCAAGCGCCCAGAGCAGA...AAAGACAGTGCATGCTATGCTTGACCACAGGACAACATTCATTTCTGTGGGACG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010795.5 |
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| CDS-3UTR GCA 90 bp | CGTCCCACAGAAATGAATGTTGTCCTGTGGTCAAGCATAGCATGCACTGTCTTTAGGGACCCCGACCACTaGATAGGACCTCAGGACCCC | + |
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Preference number: 4 (lower is better) Translates to: RPTEMNVVLWSSIACTVFRDPDH*IGPQDP Trigger: GGGGTCCTGAGGTCCTATGCAGTGGTCGGGGTCCCT...AAAGACAGTGCATGCTATGCTTGACCACAGGACAACATTCATTTCTGTGGGACG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010795.5 |
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| CDS-3UTR CCA 90 bp | TCCCACAGAAATGAATGTTGTCCTGTGGTCAAGCATAGCATGCACTGTCTTTGGCCTGCATGGTGGTGCTaGGGCGGACACCCTCATCCT | + |
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Preference number: 4 (lower is better) Translates to: SHRNECCPVVKHSMHCLWPAWWC*GGHPHP Trigger: AGGATGAGGGTGTCCGCCCCAGCACCACCATGCAGG...CCAAAGACAGTGCATGCTATGCTTGACCACAGGACAACATTCATTTCTGTGGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010795.5 |
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| CDS-3UTR GCA 90 bp | CCGTCCCACAGAAATGAATGTTGTCCTGTGGTCAAGCATAGCATGCACTGTCTTGTACAGTCTCTGGGATaGCGCTCAGGAACTGGGCGA | + |
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Preference number: 4 (lower is better) Translates to: PSHRNECCPVVKHSMHCLVQSLG*RSGTGR Trigger: TCGCCCAGTTCCTGAGCGGCATCCCAGAGACTGTAC...AAGACAGTGCATGCTATGCTTGACCACAGGACAACATTCATTTCTGTGGGACGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010795.5 |
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| CDS-3UTR CCA 90 bp | CCGTCCCACAGAAATGAATGTTGTCCTGTGGTCAAGCATAGCATGCACTGTCTTCCATGGTTCCCTCTCTaGGACAGGGTCATGGACTCC | + |
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Preference number: 4 (lower is better) Translates to: PSHRNECCPVVKHSMHCLPWFPL*DRVMDS Trigger: GGAGTCCATGACCCTGTCCCAGAGAGGGAACCATGG...AAGACAGTGCATGCTATGCTTGACCACAGGACAACATTCATTTCTGTGGGACGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010795.5 |
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| CDS-3UTR CCA 90 bp | TCCCACAGAAATGAATGTTGTCCTGTGGTCAAGCATAGCATGCACTGTCTTTGGCTTGCTGCCTTCTGCTaGGAGGCCAGCGCAAAGGCA | + |
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Preference number: 4 (lower is better) Translates to: SHRNECCPVVKHSMHCLWLAAFC*EASAKA Trigger: TGCCTTTGCGCTGGCCTCCCAGCAGAAGGCAGCAAG...CCAAAGACAGTGCATGCTATGCTTGACCACAGGACAACATTCATTTCTGTGGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010795.5 |
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| CDS-3UTR CCA 90 bp | CCGTCCCACAGAAATGAATGTTGTCCTGTGGTCAAGCATAGCATGCACTGTCTTCAGTCCCGATGCACATaGATACCACGCCGTAAGCCC | + |
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Preference number: 4 (lower is better) Translates to: PSHRNECCPVVKHSMHCLQSRCT*IPRRKP Trigger: GGGCTTACGGCGTGGTATCCATGTGCATCGGGACTG...AAGACAGTGCATGCTATGCTTGACCACAGGACAACATTCATTTCTGTGGGACGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010795.5 |
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| CDS-3UTR TCA 90 bp | CGTCCCACAGAAATGAATGTTGTCCTGTGGTCAAGCATAGCATGCACTGTCTTTATCCTGCTTCTGCCGTaGAACGCCAAACCGCTCAGC | + |
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Preference number: 4 (lower is better) Translates to: RPTEMNVVLWSSIACTVFILLLP*NAKPLS Trigger: GCTGAGCGGTTTGGCGTTTCACGGCAGAAGCAGGAT...AAAGACAGTGCATGCTATGCTTGACCACAGGACAACATTCATTTCTGTGGGACG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010795.5 |
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| CDS-3UTR GCA 90 bp | CCGTCCCACAGAAATGAATGTTGTCCTGTGGTCAAGCATAGCATGCACTGTCTTAAGGCATCCTGCTTCTaGCGTGAAACGCCAAACCGC | + |
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Preference number: 4 (lower is better) Translates to: PSHRNECCPVVKHSMHCLKASCF*RETPNR Trigger: GCGGTTTGGCGTTTCACGGCAGAAGCAGGATGCCTT...AAGACAGTGCATGCTATGCTTGACCACAGGACAACATTCATTTCTGTGGGACGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010795.5 |
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| CDS-3UTR GCA 90 bp | CGTCCCACAGAAATGAATGTTGTCCTGTGGTCAAGCATAGCATGCACTGTCTTTCAGCAGGACGGCAGCTaGTCCATCACTCACCTGACT | + |
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Preference number: 4 (lower is better) Translates to: RPTEMNVVLWSSIACTVFQQDGS*SITHLT Trigger: AGTCAGGTGAGTGATGGAGCAGCTGCCGTCCTGCTG...AAAGACAGTGCATGCTATGCTTGACCACAGGACAACATTCATTTCTGTGGGACG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010795.5 |
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| CDS-3UTR GCA 90 bp | CGTCCCACAGAAATGAATGTTGTCCTGTGGTCAAGCATAGCATGCACTGTCTTTGTCAGCCCTGCTTTCTaGAAGGCTGCAGGGATGGCA | + |
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Preference number: 4 (lower is better) Translates to: RPTEMNVVLWSSIACTVFVSPAF*KAAGMA Trigger: TGCCATCCCTGCAGCCTTGCAGAAAGCAGGGCTGAC...AAAGACAGTGCATGCTATGCTTGACCACAGGACAACATTCATTTCTGTGGGACG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010795.5 |
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| CDS-3UTR GCA 90 bp | TCCCACAGAAATGAATGTTGTCCTGTGGTCAAGCATAGCATGCACTGTCTTTGGCCATCCCAGTCCCGATaGACATGGATACCACGCCGT | + |
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Preference number: 4 (lower is better) Translates to: SHRNECCPVVKHSMHCLWPSQSR*TWIPRR Trigger: ACGGCGTGGTATCCATGTGCATCGGGACTGGGATGG...CCAAAGACAGTGCATGCTATGCTTGACCACAGGACAACATTCATTTCTGTGGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010795.5 |
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| CDS-3UTR TCA 90 bp | CCGTCCCACAGAAATGAATGTTGTCCTGTGGTCAAGCATAGCATGCACTGTCTTCGGACACCCTCATCCTaGGACACAGTGATGGTTTTC | + |
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Preference number: 4 (lower is better) Translates to: PSHRNECCPVVKHSMHCLRTPSS*DTVMVF Trigger: GAAAACCATCACTGTGTCTCAGGATGAGGGTGTCCG...AAGACAGTGCATGCTATGCTTGACCACAGGACAACATTCATTTCTGTGGGACGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010795.5 |
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| CDS-3UTR GCA 90 bp | CGTCCCACAGAAATGAATGTTGTCCTGTGGTCAAGCATAGCATGCACTGTCTTTTGCTTTCTGCAAGGCTaGAGGGATGGCATAGGCAGG | + |
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Preference number: 4 (lower is better) Translates to: RPTEMNVVLWSSIACTVFCFLQG*RDGIGR Trigger: CCTGCCTATGCCATCCCTGCAGCCTTGCAGAAAGCA...AAAGACAGTGCATGCTATGCTTGACCACAGGACAACATTCATTTCTGTGGGACG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010795.5 |
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| CDS-3UTR CCA 90 bp | CCGTCCCACAGAAATGAATGTTGTCCTGTGGTCAAGCATAGCATGCACTGTCTTGGCACAATCTCAGCATaGAAGCATCCTCTGCTCTGG | + |
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Preference number: 4 (lower is better) Translates to: PSHRNECCPVVKHSMHCLGTISA*KHPLLW Trigger: CCAGAGCAGAGGATGCTTCCATGCTGAGATTGTGCC...AAGACAGTGCATGCTATGCTTGACCACAGGACAACATTCATTTCTGTGGGACGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010795.5 |
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| CDS-3UTR GCA 90 bp | CGTCCCACAGAAATGAATGTTGTCCTGTGGTCAAGCATAGCATGCACTGTCTTTATGTTGGCCACTGCCTaGAGTCCCGATGAACACTGT | + |
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Preference number: 4 (lower is better) Translates to: RPTEMNVVLWSSIACTVFMLATA*SPDEHC Trigger: ACAGTGTTCATCGGGACTGCAGGCAGTGGCCAACAT...AAAGACAGTGCATGCTATGCTTGACCACAGGACAACATTCATTTCTGTGGGACG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010795.5 |
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| CDS-3UTR GCA 90 bp | CGTCCCACAGAAATGAATGTTGTCCTGTGGTCAAGCATAGCATGCACTGTCTTTCCACCCCACAGGCCATaGCAATGTCATAAGACCCAT | + |
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Preference number: 4 (lower is better) Translates to: RPTEMNVVLWSSIACTVFPPHRP*QCHKTH Trigger: ATGGGTCTTATGACATTGGCATGGCCTGTGGGGTGG...AAAGACAGTGCATGCTATGCTTGACCACAGGACAACATTCATTTCTGTGGGACG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010795.5 |
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| CDS-3UTR GCA 90 bp | CCGTCCCACAGAAATGAATGTTGTCCTGTGGTCAAGCATAGCATGCACTGTCTTGTAGACGGCCTGACTTaGAAAGGCCTCATTGATCTC | + |
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Preference number: 4 (lower is better) Translates to: PSHRNECCPVVKHSMHCLVDGLT*KGLIDL Trigger: GAGATCAATGAGGCCTTTGCAAGTCAGGCCGTCTAC...AAGACAGTGCATGCTATGCTTGACCACAGGACAACATTCATTTCTGTGGGACGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010795.5 |
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| CDS-3UTR CCA 90 bp | TCCCACAGAAATGAATGTTGTCCTGTGGTCAAGCATAGCATGCACTGTCTTTGGTTTAGCTTCACGTCCTaGAGAACCGCGGTCAACACG | + |
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Preference number: 4 (lower is better) Translates to: SHRNECCPVVKHSMHCLWFSFTS*RTAVNT Trigger: CGTGTTGACCGCGGTTCTCCAGGACGTGAAGCTAAA...CCAAAGACAGTGCATGCTATGCTTGACCACAGGACAACATTCATTTCTGTGGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010795.5 |
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| CDS-3UTR CCA 90 bp | TCCCACAGAAATGAATGTTGTCCTGTGGTCAAGCATAGCATGCACTGTCTTTGGGAATCAGGCAGTCTCTaGCCTTCTCGTTCTCCAGCA | + |
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Preference number: 4 (lower is better) Translates to: SHRNECCPVVKHSMHCLWESGSL*PSRSPA Trigger: TGCTGGAGAACGAGAAGGCCAGAGACTGCCTGATTC...CCAAAGACAGTGCATGCTATGCTTGACCACAGGACAACATTCATTTCTGTGGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010795.5 |
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| CDS-3UTR CCA 90 bp | CGTCCCACAGAAATGAATGTTGTCCTGTGGTCAAGCATAGCATGCACTGTCTTTGAAGAAATATTCCCATaGTTCCCTCTCTGGGACAGG | + |
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Preference number: 4 (lower is better) Translates to: RPTEMNVVLWSSIACTVFEEIFP*FPLWDR Trigger: CCTGTCCCAGAGAGGGAACCATGGGAATATTTCTTC...AAAGACAGTGCATGCTATGCTTGACCACAGGACAACATTCATTTCTGTGGGACG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010795.5 |
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| CDS-3UTR CCA 90 bp | TCCCACAGAAATGAATGTTGTCCTGTGGTCAAGCATAGCATGCACTGTCTTTGGTGTCATTCAGGACAGTaGTTGTCACAGGCACAATCT | + |
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Preference number: 4 (lower is better) Translates to: SHRNECCPVVKHSMHCLWCHSGQ*LSQAQS Trigger: AGATTGTGCCTGTGACAACCACTGTCCTGAATGACA...CCAAAGACAGTGCATGCTATGCTTGACCACAGGACAACATTCATTTCTGTGGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010795.5 |
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| CDS GCA 90 bp | GCCCGTCTGCCACGGCGCTTCAGTTCATTGAGTAGCGTGACAACCTaGCTTGCTCCCGTGCAGCCCAGGGGGTGGCCCAGGGCTATTGCA | + |
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Preference number: 5 (lower is better) Translates to: ARLPRRFSSLSSVTT*LAPVQPRGWPRAIA Trigger: TGCAATAGCCCTGGGCCACCCCCTGGGCTGCACGGGAGCAAGGCAGGTTGTCACGCTACTCAATGAACTGAAGCGCCGTGGCAGACGGGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000010795.5 |
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| CDS CCA 90 bp | CCCACGGAGATGTCTCCCAGCTGCTCAGGCTTTAGCTTCACGTCCTaGAGAACCGCGGTCAACACGGCCGACAGAAGCTCGTCGGGGGTG | + |
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Preference number: 5 (lower is better) Translates to: PTEMSPSCSGFSFTS*RTAVNTADRSSSGV Trigger: CACCCCCGACGAGCTTCTGTCGGCCGTGTTGACCGCGGTTCTCCAGGACGTGAAGCTAAAGCCTGAGCAGCTGGGAGACATCTCCGTGGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000010795.5 |
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| CDS TCA 90 bp | CTCAGGAACTGGGCGATGCGTGCCATAATGGCTCCAGCCCCGGGCTaGAGCACATTGCCCACGGAGATGTCTCCCAGCTGCTCAGGCTTT | + |
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Preference number: 5 (lower is better) Translates to: LRNWAMRAIMAPAPG*STLPTEMSPSCSGF Trigger: AAAGCCTGAGCAGCTGGGAGACATCTCCGTGGGCAATGTGCTTCAGCCCGGGGCTGGAGCCATTATGGCACGCATCGCCCAGTTCCTGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010795.5 |
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| CDS GCA 90 bp | CAAAGGTACAGTCTCTGGGATGCCGCTCAGGAACTGGGCGATGCGTaGCATAATGGCTCCAGCCCCGGGCTGAAGCACATTGCCCACGGA | + |
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Preference number: 5 (lower is better) Translates to: QRYSLWDAAQELGDA*HNGSSPGLKHIAHG Trigger: TCCGTGGGCAATGTGCTTCAGCCCGGGGCTGGAGCCATTATGGCACGCATCGCCCAGTTCCTGAGCGGCATCCCAGAGACTGTACCTTTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010795.5 |
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| CDS GCA 90 bp | TCCCAGGGTATTCAAAGACCGCAGCAGCTCCCATCCCAGTCCCGATaGACATGGATACCACGCCGTAAGCCCGTCTGCCACGGCGCTTCA | + |
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Preference number: 5 (lower is better) Translates to: SQGIQRPQQLPSQSR*TWIPRRKPVCHGAS Trigger: TGAAGCGCCGTGGCAGACGGGCTTACGGCGTGGTATCCATGTGCATCGGGACTGGGATGGGAGCTGCTGCGGTCTTTGAATACCCTGGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010795.5 |
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| CDS CCA 90 bp | TCTCTGGCCTTCTCGTTCTCCAGCAGGCGGGAAGAAATATTCCCATaGTTCCCTCTCTGGGACAGGGTCATGGACTCCACCCCACAGGCC | + |
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Preference number: 5 (lower is better) Translates to: SLAFSFSSRREEIFP*FPLWDRVMDSTPQA Trigger: GGCCTGTGGGGTGGAGTCCATGACCCTGTCCCAGAGAGGGAACCATGGGAATATTTCTTCCCGCCTGCTGGAGAACGAGAAGGCCAGAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010795.5 |
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| CDS CCA 90 bp | GGTATTCAAAGACCGCAGCAGCTCCCATCCCAGTCCCGATGCACATaGATACCACGCCGTAAGCCCGTCTGCCACGGCGCTTCAGTTCAT | + |
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Preference number: 5 (lower is better) Translates to: GIQRPQQLPSQSRCT*IPRRKPVCHGASVH Trigger: ATGAACTGAAGCGCCGTGGCAGACGGGCTTACGGCGTGGTATCCATGTGCATCGGGACTGGGATGGGAGCTGCTGCGGTCTTTGAATACC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010795.5 |
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| CDS TCA 90 bp | TGCCTTCTGCTGGGAGGCCAGCGCAAAGGCATCCTGCTTCTGCCGTaGAACGCCAAACCGCTCAGCCACATTCTCCGAAGTTATCCCCAT | + |
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Preference number: 5 (lower is better) Translates to: CLLLGGQRKGILLLP*NAKPLSHILRSYPH Trigger: ATGGGGATAACTTCGGAGAATGTGGCTGAGCGGTTTGGCGTTTCACGGCAGAAGCAGGATGCCTTTGCGCTGGCCTCCCAGCAGAAGGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010795.5 |
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| CDS GCA 90 bp | CTTGCTGCCTTCTGCTGGGAGGCCAGCGCAAAGGCATCCTGCTTCTaGCGTGAAACGCCAAACCGCTCAGCCACATTCTCCGAAGTTATC | + |
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Preference number: 5 (lower is better) Translates to: LAAFCWEASAKASCF*RETPNRSATFSEVI Trigger: GATAACTTCGGAGAATGTGGCTGAGCGGTTTGGCGTTTCACGGCAGAAGCAGGATGCCTTTGCGCTGGCCTCCCAGCAGAAGGCAGCAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010795.5 |
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| CDS TCA 90 bp | TTGGCCAGGCCCTGCATGGTGGTGCTGGGGCGGACACCCTCATCCTaGGACACAGTGATGGTTTTCTTGTCACCCTTGTCATTCAGGACA | + |
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Preference number: 5 (lower is better) Translates to: LARPCMVVLGRTPSS*DTVMVFLSPLSFRT Trigger: TGTCCTGAATGACAAGGGTGACAAGAAAACCATCACTGTGTCTCAGGATGAGGGTGTCCGCCCCAGCACCACCATGCAGGGCCTGGCCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000010795.5 |
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| CDS-3UTR CAA 90 bp | CCGTCCCACAGAAATGAATGTTGTCCTGTGGTCAAGCATAGCATGCACTGTCTTTCGGGGGTGGTGTCCTaGAAGCAGCCACGGCTGGCG | + |
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Preference number: 5 (lower is better) Translates to: PSHRNECCPVVKHSMHCLSGVVS*KQPRLA Trigger: CGCCAGCCGTGGCTGCTTCAAGGACACCACCCCCGA...AAGACAGTGCATGCTATGCTTGACCACAGGACAACATTCATTTCTGTGGGACGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000010795.5 |
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| CDS TCA 90 bp | CCTGCATGGTGGTGCTGGGGCGGACACCCTCATCCTGAGACACAGTaGTGGTTTTCTTGTCACCCTTGTCATTCAGGACAGTGGTTGTCA | + |
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Preference number: 5 (lower is better) Translates to: PAWWCWGGHPHPETQ*WFSCHPCHSGQWLS Trigger: TGACAACCACTGTCCTGAATGACAAGGGTGACAAGAAAACCATCACTGTGTCTCAGGATGAGGGTGTCCGCCCCAGCACCACCATGCAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000010795.5 |
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| CDS CCA 90 bp | GGCGGGAAGAAATATTCCCATGGTTCCCTCTCTGGGACAGGGTCATaGACTCCACCCCACAGGCCATGCCAATGTCATAAGACCCATTTC | + |
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Preference number: 5 (lower is better) Translates to: GGKKYSHGSLSGTGS*TPPHRPCQCHKTHF Trigger: GAAATGGGTCTTATGACATTGGCATGGCCTGTGGGGTGGAGTCCATGACCCTGTCCCAGAGAGGGAACCATGGGAATATTTCTTCCCGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010795.5 |
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| CDS TCA 90 bp | ATTTCTGATGCCACCAGCAATGTTGGCCACTGCCTGCAGTCCCGATaGACACTGTCTGTTGACCGTAGACAAAGGTACAGTCTCTGGGAT | + |
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Preference number: 5 (lower is better) Translates to: ISDATSNVGHCLQSR*TLSVDRRQRYSLWD Trigger: ATCCCAGAGACTGTACCTTTGTCTACGGTCAACAGACAGTGTTCATCGGGACTGCAGGCAGTGGCCAACATTGCTGGTGGCATCAGAAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010795.5 |
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| CDS-3UTR CAA 90 bp | CCGTCCCACAGAAATGAATGTTGTCCTGTGGTCAAGCATAGCATGCACTGTCTTCGGCGCTTCAGTTCATaGAGTAGCGTGACAACCTGC | + |
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Preference number: 5 (lower is better) Translates to: PSHRNECCPVVKHSMHCLRRFSS*SSVTTC Trigger: GCAGGTTGTCACGCTACTCAATGAACTGAAGCGCCG...AAGACAGTGCATGCTATGCTTGACCACAGGACAACATTCATTTCTGTGGGACGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010795.5 |
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| CDS-3UTR CAA 90 bp | CGTCCCACAGAAATGAATGTTGTCCTGTGGTCAAGCATAGCATGCACTGTCTTTCATTCAGGACAGTGGTaGTCACAGGCACAATCTCAG | + |
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Preference number: 5 (lower is better) Translates to: RPTEMNVVLWSSIACTVFHSGQW*SQAQSQ Trigger: CTGAGATTGTGCCTGTGACAACCACTGTCCTGAATG...AAAGACAGTGCATGCTATGCTTGACCACAGGACAACATTCATTTCTGTGGGACG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010795.5 |
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| CDS-3UTR CAA 90 bp | TCCCACAGAAATGAATGTTGTCCTGTGGTCAAGCATAGCATGCACTGTCTTTGGGTTTTCTTGTCACCCTaGTCATTCAGGACAGTGGTT | + |
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Preference number: 5 (lower is better) Translates to: SHRNECCPVVKHSMHCLWVFLSP*SFRTVV Trigger: AACCACTGTCCTGAATGACAAGGGTGACAAGAAAAC...CCAAAGACAGTGCATGCTATGCTTGACCACAGGACAACATTCATTTCTGTGGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010795.5 |
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| CDS CAA 90 bp | GTCGGAGGCCGAGGCCTGCAGGAAGCCAGCGGAGCAGGGCGCAGCTaGCAGCGCGGAGCTCGACTCGGGCCGGCCGGCCAGGTGACCCAG | + |
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Preference number: 6 (lower is better) Translates to: VGGRGLQEASGAGRS*QRGARLGPAGQVTQ Trigger: CTGGGTCACCTGGCCGGCCGGCCCGAGTCGAGCTCCGCGCTGCAAGCTGCGCCCTGCTCCGCTGGCTTCCTGCAGGCCTCGGCCTCCGAC 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010795.5 |
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| CDS GCA 72 bp | CCACGGCGCTTCAGTTCATTGAGTAGCGTGACAACCTaGCTTGCTCCCGTGCAGCCCAGGGGGTGGCCCAGG | + |
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Preference number: 6 (lower is better) Translates to: PRRFSSLSSVTT*LAPVQPRGWPR Trigger: CCTGGGCCACCCCCTGGGCTGCACGGGAGCAAGGCAGGTTGTCACGCTACTCAATGAACTGAAGCGCCGTGG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000010795.5 |
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| CDS CCA 72 bp | AGACCGCAGCAGCTCCCATCCCAGTCCCGATGCACATaGATACCACGCCGTAAGCCCGTCTGCCACGGCGCT | + |
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Preference number: 6 (lower is better) Translates to: RPQQLPSQSRCT*IPRRKPVCHGA Trigger: AGCGCCGTGGCAGACGGGCTTACGGCGTGGTATCCATGTGCATCGGGACTGGGATGGGAGCTGCTGCGGTCT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010795.5 |
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| CDS GCA 72 bp | GCTGCCTTCTGCTGGGAGGCCAGCGCAAAGGCATCCTaGTTCTGCCGTGAAACGCCAAACCGCTCAGCCACA | + |
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Preference number: 6 (lower is better) Translates to: AAFCWEASAKAS*FCRETPNRSAT Trigger: TGTGGCTGAGCGGTTTGGCGTTTCACGGCAGAAGCAGGATGCCTTTGCGCTGGCCTCCCAGCAGAAGGCAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010795.5 |
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| CDS GCA 72 bp | AGTCTCTGGGATGCCGCTCAGGAACTGGGCGATGCGTaGCATAATGGCTCCAGCCCCGGGCTGAAGCACATT | + |
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Preference number: 6 (lower is better) Translates to: SLWDAAQELGDA*HNGSSPGLKHI Trigger: AATGTGCTTCAGCCCGGGGCTGGAGCCATTATGGCACGCATCGCCCAGTTCCTGAGCGGCATCCCAGAGACT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010795.5 |
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| CDS GCA 72 bp | TTCTGCTGGGAGGCCAGCGCAAAGGCATCCTGCTTCTaGCGTGAAACGCCAAACCGCTCAGCCACATTCTCC | + |
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Preference number: 6 (lower is better) Translates to: FCWEASAKASCF*RETPNRSATFS Trigger: GGAGAATGTGGCTGAGCGGTTTGGCGTTTCACGGCAGAAGCAGGATGCCTTTGCGCTGGCCTCCCAGCAGAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010795.5 |
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| CDS GCA 72 bp | ATTCAAAGACCGCAGCAGCTCCCATCCCAGTCCCGATaGACATGGATACCACGCCGTAAGCCCGTCTGCCAC | + |
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Preference number: 6 (lower is better) Translates to: IQRPQQLPSQSR*TWIPRRKPVCH Trigger: GTGGCAGACGGGCTTACGGCGTGGTATCCATGTGCATCGGGACTGGGATGGGAGCTGCTGCGGTCTTTGAAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010795.5 |
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| CDS CCA 72 bp | ATGTCTCCCAGCTGCTCAGGCTTTAGCTTCACGTCCTaGAGAACCGCGGTCAACACGGCCGACAGAAGCTCG | + |
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Preference number: 6 (lower is better) Translates to: MSPSCSGFSFTS*RTAVNTADRSS Trigger: CGAGCTTCTGTCGGCCGTGTTGACCGCGGTTCTCCAGGACGTGAAGCTAAAGCCTGAGCAGCTGGGAGACAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010795.5 |
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| CDS CCA 72 bp | ACACTGTCTGTTGACCGTAGACAAAGGTACAGTCTCTaGGATGCCGCTCAGGAACTGGGCGATGCGTGCCAT | + |
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Preference number: 6 (lower is better) Translates to: TLSVDRRQRYSL*DAAQELGDACH Trigger: ATGGCACGCATCGCCCAGTTCCTGAGCGGCATCCCAGAGACTGTACCTTTGTCTACGGTCAACAGACAGTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010795.5 |
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| CDS CCA 72 bp | TTCTCGTTCTCCAGCAGGCGGGAAGAAATATTCCCATaGTTCCCTCTCTGGGACAGGGTCATGGACTCCACC | + |
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Preference number: 6 (lower is better) Translates to: FSFSSRREEIFP*FPLWDRVMDST Trigger: GGTGGAGTCCATGACCCTGTCCCAGAGAGGGAACCATGGGAATATTTCTTCCCGCCTGCTGGAGAACGAGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010795.5 |
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| CDS CCA 72 bp | TTCAGGACAGTGGTTGTCACAGGCACAATCTCAGCATaGAAGCATCCTCTGCTCTGGGCGCTTGCTGCCTTC | + |
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Preference number: 6 (lower is better) Translates to: FRTVVVTGTISA*KHPLLWALAAF Trigger: GAAGGCAGCAAGCGCCCAGAGCAGAGGATGCTTCCATGCTGAGATTGTGCCTGTGACAACCACTGTCCTGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010795.5 |
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| CDS TCA 72 bp | TGGTGCTGGGGCGGACACCCTCATCCTGAGACACAGTaGTGGTTTTCTTGTCACCCTTGTCATTCAGGACAG | + |
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Preference number: 6 (lower is better) Translates to: WCWGGHPHPETQ*WFSCHPCHSGQ Trigger: CTGTCCTGAATGACAAGGGTGACAAGAAAACCATCACTGTGTCTCAGGATGAGGGTGTCCGCCCCAGCACCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000010795.5 |
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| CDS CAA 72 bp | TGGTTTTCTTGTCACCCTTGTCATTCAGGACAGTGGTaGTCACAGGCACAATCTCAGCATGGAAGCATCCTC | + |
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Preference number: 6 (lower is better) Translates to: WFSCHPCHSGQW*SQAQSQHGSIL Trigger: GAGGATGCTTCCATGCTGAGATTGTGCCTGTGACAACCACTGTCCTGAATGACAAGGGTGACAAGAAAACCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010795.5 |
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