Pregenerated sensors for ACAA1A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000036138Ensembl transcript IDs: ENSMUST00000039784.12, ENSMUST00000175743.8, ENSMUST00000176351.8, ENSMUST00000176397.8, ENSMUST00000176546.2, ENSMUST00000177463.8
Found 127 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CTTTCTGCAAGGCTGCAGGGATGGCATAGGCAGGTCCGATGCCCATaGCGTCAGGAGGGACCCCGACCACTGCATAGGACCTCAGGACCC | + |
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Preference number: 1 (lower is better) Translates to: LSARLQGWHRQVRCP*RQEGPRPLHRTSGP Trigger: GGGTCCTGAGGTCCTATGCAGTGGTCGGGGTCCCTCCTGACGTCATGGGCATCGGACCTGCCTATGCCATCCCTGCAGCCTTGCAGAAAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176546.2 |
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| 3UTR GCA 90 bp | TCCCAGGGTATTCAAAGACCGCAGCAGCTCCCATCCCAGTCCCGATaGACATGGACACCACGCCGTAAGCCCGTCTGCCACGACGCTTCA | + |
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Preference number: 1 (lower is better) Translates to: SQGIQRPQQLPSQSR*TWTPRRKPVCHDAS Trigger: TGAAGCGTCGTGGCAGACGGGCTTACGGCGTGGTGTCCATGTGCATCGGGACTGGGATGGGAGCTGCTGCGGTCTTTGAATACCCTGGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175743.8 |
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| 3UTR TCA 90 bp | ATTATGTTTTCTAAAGTAAAGTGCTGTGACACACCCCTCCACTGCTaGGTGTCCCACGCAGACGGCTTCTGTAGCGTCCCTCTCTGGACA | + |
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Preference number: 1 (lower is better) Translates to: IMFSKVKCCDTPLHC*VSHADGFCSVPLWT Trigger: TGTCCAGAGAGGGACGCTACAGAAGCCGTCTGCGTGGGACACTCAGCAGTGGAGGGGTGTGTCACAGCACTTTACTTTAGAAAACATAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039784.12 |
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| 3UTR-3UTR CCA 90 bp | GCCCATGACGTCAGGAGGGACCCCGACCACTGCATAGGACCTCAGGACCCCAAGAGGCAGGCTTCAGCTTaGCCAGGCCCTGCATGGTGG | + |
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Preference number: 2 (lower is better) Translates to: AHDVRRDPDHCIGPQDPKRQASA*PGPAWW Trigger: CCACCATGCAGGGCCTGGCCAAGCTGAAGCCTGCCT...CTTGGGGTCCTGAGGTCCTATGCAGTGGTCGGGGTCCCTCCTGACGTCATGGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176546.2 |
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| 3UTR-3UTR GCA 90 bp | GTCATTCACAGTCAGCCCTGCTTTCTGCAAGGCTGCAGGGATGGCATAGGCAGGAGCTTGGCCAGGCCCTaGATGGTGGTGCTGGGACGG | + |
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Preference number: 2 (lower is better) Translates to: VIHSQPCFLQGCRDGIGRSLARP*MVVLGR Trigger: CCGTCCCAGCACCACCATGCAGGGCCTGGCCAAGCT...CCTGCCTATGCCATCCCTGCAGCCTTGCAGAAAGCAGGGCTGACTGTGAATGAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176546.2 |
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| 3UTR-3UTR CCA 90 bp | AGCTGCTCCATCACTCACCTGACTGGAGTTTCCAGCCGTGGTAGAGCCTCCATCTGGCCAGGCCCTGCATaGTGGTGCTGGGACGGACAC | + |
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Preference number: 2 (lower is better) Translates to: SCSITHLTGVSSRGRASIWPGPA*WCWDGH Trigger: GTGTCCGTCCCAGCACCACCATGCAGGGCCTGGCCA...GATGGAGGCTCTACCACGGCTGGAAACTCCAGTCAGGTGAGTGATGGAGCAGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176546.2 |
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| 3UTR-3UTR TCA 90 bp | TCAAAGATGTCTATGTCATTCACAGTCAGCCCTGCTTTCTGCAAGGCTGCAGGGGCTCCATCACTCACCTaGCTGGAGTTTCCAGCCGTG | + |
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Preference number: 2 (lower is better) Translates to: SKMSMSFTVSPAFCKAAGAPSLT*LEFPAV Trigger: CACGGCTGGAAACTCCAGTCAGGTGAGTGATGGAGC...CCCTGCAGCCTTGCAGAAAGCAGGGCTGACTGTGAATGACATAGACATCTTTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176546.2 |
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| 3UTR-3UTR GCA 90 bp | TCAAAGATGTCTATGTCATTCACAGTCAGCCCTGCTTTCTGCAAGGCTGCAGGGCAGCAGGACGGCAGCTaGTCCATCACTCACCTGACT | + |
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Preference number: 2 (lower is better) Translates to: SKMSMSFTVSPAFCKAAGQQDGS*SITHLT Trigger: AGTCAGGTGAGTGATGGAGCAGCTGCCGTCCTGCTG...CCCTGCAGCCTTGCAGAAAGCAGGGCTGACTGTGAATGACATAGACATCTTTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176546.2 |
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| 3UTR-3UTR GCA 90 bp | GTAGACGGCCTGACTTGCAAAGGCCTCATTGATCTCAAAGATGTCTATGTCATTAGGGACCCCGACCACTaGATAGGACCTCAGGACCCC | + |
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Preference number: 2 (lower is better) Translates to: VDGLTCKGLIDLKDVYVIRDPDH*IGPQDP Trigger: GGGGTCCTGAGGTCCTATGCAGTGGTCGGGGTCCCT...AATGACATAGACATCTTTGAGATCAATGAGGCCTTTGCAAGTCAGGCCGTCTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176546.2 |
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| 3UTR-3UTR CCA 90 bp | GGCCTGACTTGCAAAGGCCTCATTGATCTCAAAGATGTCTATGTCATTCACAGTTCAGGACCCCAAGGATaGGGAGGCCCAGTTCTTCAG | + |
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Preference number: 2 (lower is better) Translates to: GLTCKGLIDLKDVYVIHSSGPQG*GGPVLQ Trigger: CTGAAGAACTGGGCCTCCCCATCCTTGGGGTCCTGA...ACTGTGAATGACATAGACATCTTTGAGATCAATGAGGCCTTTGCAAGTCAGGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176546.2 |
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| 3UTR-3UTR GCA 90 bp | CACTGTTCAGGGTACCTGACGGGGCAGTCCCACCCTCTGTTCCAACATCAATTATTTTCTAAAGTAAAGTaGTGTGACACACCCCTCCAC | + |
|
Preference number: 2 (lower is better) Translates to: HCSGYLTGQSHPLFQHQLFSKVK*CDTPLH Trigger: GTGGAGGGGTGTGTCACAGCACTTTACTTTAGAAAA...TAATTGATGTTGGAACAGAGGGTGGGACTGCCCCGTCAGGTACCCTGAACAGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000039784.12 |
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| 3UTR-3UTR TCA 90 bp | CTCATTGATCTCAAAGATGTCTATGTCATTCACAGTCAGCCCTGCTTTCTGCAACGGACACCCTCATCCTaGGACACGGTGATGGTTTTC | + |
|
Preference number: 2 (lower is better) Translates to: LIDLKDVYVIHSQPCFLQRTPSS*DTVMVF Trigger: GAAAACCATCACCGTGTCTCAGGATGAGGGTGTCCG...TTGCAGAAAGCAGGGCTGACTGTGAATGACATAGACATCTTTGAGATCAATGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176546.2 |
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| 3UTR CCA 72 bp | AGACCGCAGCAGCTCCCATCCCAGTCCCGATGCACATaGACACCACGCCGTAAGCCCGTCTGCCACGACGCT | + |
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Preference number: 3 (lower is better) Translates to: RPQQLPSQSRCT*TPRRKPVCHDA Trigger: AGCGTCGTGGCAGACGGGCTTACGGCGTGGTGTCCATGTGCATCGGGACTGGGATGGGAGCTGCTGCGGTCT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175743.8 |
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| 3UTR CCA 72 bp | GGACCCCAAGGATGGGGAGGCCCAGTTCTTCAGCCTTaGACCTCCGAGCCAGCAGGACGGCAGCTGCTCCAT | + |
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Preference number: 3 (lower is better) Translates to: GPQGWGGPVLQP*TSEPAGRQLLH Trigger: ATGGAGCAGCTGCCGTCCTGCTGGCTCGGAGGTCCAAGGCTGAAGAACTGGGCCTCCCCATCCTTGGGGTCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176546.2 |
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| 3UTR TCA 72 bp | AGGCTGCAGGGATGGCATAGGCAGGTCCGATGCCCATaGCGTCAGGAGGGACCCCGACCACTGCATAGGACC | + |
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Preference number: 3 (lower is better) Translates to: RLQGWHRQVRCP*RQEGPRPLHRT Trigger: GGTCCTATGCAGTGGTCGGGGTCCCTCCTGACGTCATGGGCATCGGACCTGCCTATGCCATCCCTGCAGCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176546.2 |
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| 3UTR CCA 72 bp | CCCCGACCACTGCATAGGACCTCAGGACCCCAAGGATaGGGAGGCCCAGTTCTTCAGCCTTGGACCTCCGAG | + |
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Preference number: 3 (lower is better) Translates to: PRPLHRTSGPQG*GGPVLQPWTSE Trigger: CTCGGAGGTCCAAGGCTGAAGAACTGGGCCTCCCCATCCTTGGGGTCCTGAGGTCCTATGCAGTGGTCGGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176546.2 |
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| 3UTR GCA 72 bp | TTCAGCCTTGGACCTCCGAGCCAGCAGGACGGCAGCTaGTCCATCACTCACCTGACTGGAGTTTCCAGCCGT | + |
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Preference number: 3 (lower is better) Translates to: FSLGPPSQQDGS*SITHLTGVSSR Trigger: ACGGCTGGAAACTCCAGTCAGGTGAGTGATGGAGCAGCTGCCGTCCTGCTGGCTCGGAGGTCCAAGGCTGAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176546.2 |
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| 3UTR-3UTR CAA 90 bp | TCCGATGCCCATGACGTCAGGAGGGACCCCGACCACTGCATAGGACCTCAGGACGTAGAGCCTCCATCCTaGAAGGCAGGCTTCAGCTTG | + |
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Preference number: 3 (lower is better) Translates to: SDAHDVRRDPDHCIGPQDVEPPS*KAGFSL Trigger: CAAGCTGAAGCCTGCCTTCAAGGATGGAGGCTCTAC...GTCCTGAGGTCCTATGCAGTGGTCGGGGTCCCTCCTGACGTCATGGGCATCGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176546.2 |
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| 3UTR TCA 72 bp | CCCTGCATGGTGGTGCTGGGACGGACACCCTCATCCTaGGACACGGTGATGGTTTTCTTGTCACCCTTGTCA | + |
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Preference number: 3 (lower is better) Translates to: PCMVVLGRTPSS*DTVMVFLSPLS Trigger: TGACAAGGGTGACAAGAAAACCATCACCGTGTCTCAGGATGAGGGTGTCCGTCCCAGCACCACCATGCAGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176546.2 |
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| 3UTR-3UTR CAA 90 bp | CAAAGATGTCTATGTCATTCACAGTCAGCCCTGCTTTCTGCAAGGCTGCAGGGACCCAGTTCTTCAGCCTaGGACCTCCGAGCCAGCAGG | + |
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Preference number: 3 (lower is better) Translates to: QRCLCHSQSALLSARLQGPSSSA*DLRASR Trigger: CCTGCTGGCTCGGAGGTCCAAGGCTGAAGAACTGGG...TCCCTGCAGCCTTGCAGAAAGCAGGGCTGACTGTGAATGACATAGACATCTTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176546.2 |
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| 3UTR TCA 72 bp | TGGTGCTGGGACGGACACCCTCATCCTGAGACACGGTaGTGGTTTTCTTGTCACCCTTGTCATCCAGGACAG | + |
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Preference number: 3 (lower is better) Translates to: WCWDGHPHPETR*WFSCHPCHPGQ Trigger: CTGTCCTGGATGACAAGGGTGACAAGAAAACCATCACCGTGTCTCAGGATGAGGGTGTCCGTCCCAGCACCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176546.2 |
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| 3UTR GCA 72 bp | TATGTCATTCACAGTCAGCCCTGCTTTCTGCAAGGCTaGAGGGATGGCATAGGCAGGTCCGATGCCCATGAC | + |
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Preference number: 3 (lower is better) Translates to: YVIHSQPCFLQG*RDGIGRSDAHD Trigger: GTCATGGGCATCGGACCTGCCTATGCCATCCCTGCAGCCTTGCAGAAAGCAGGGCTGACTGTGAATGACATA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176546.2 |
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| 3UTR GCA 72 bp | GATCTCAAAGATGTCTATGTCATTCACAGTCAGCCCTaGTTTCTGCAAGGCTGCAGGGATGGCATAGGCAGG | + |
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Preference number: 3 (lower is better) Translates to: DLKDVYVIHSQP*FLQGCRDGIGR Trigger: CCTGCCTATGCCATCCCTGCAGCCTTGCAGAAAGCAGGGCTGACTGTGAATGACATAGACATCTTTGAGATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176546.2 |
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| CDS-3UTR TCA 90 bp | CCCAGTCCCGATGCACATGGACACCACGCCGTAAGCCCGTCTGCCACGACGCTTGGGCGATGCGTGCCATaGCAGCCCCGGCTCCTGGCT | + |
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Preference number: 4 (lower is better) Translates to: PSPDAHGHHAVSPSATTLGRCVP*QPRLLA Trigger: AGCCAGGAGCCGGGGCTGTCATGGCACGCATCGCCC...AAGCGTCGTGGCAGACGGGCTTACGGCGTGGTGTCCATGTGCATCGGGACTGGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175743.8 |
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| CDS-3UTR CCA 90 bp | AGACCGCAGCAGCTCCCATCCCAGTCCCGATGCACATGGACACCACGCCGTAAGGGCCGGCCGGCCAGGTaGCCCAGCACTACCTGCAGC | + |
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Preference number: 4 (lower is better) Translates to: RPQQLPSQSRCTWTPRRKGRPAR*PSTTCS Trigger: GCTGCAGGTAGTGCTGGGCCACCTGGCCGGCCGGCC...CTTACGGCGTGGTGTCCATGTGCATCGGGACTGGGATGGGAGCTGCTGCGGTCT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175743.8 |
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| CDS-3UTR CCA 90 bp | CCCTCTCTGGACACCACTGTGGCACTCTCTGGGTTGTGCCGCCTGCAGCCAGGCGTGCAGCCCAGGGGGTaGCCCAGGGCTATTGCACCC | + |
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Preference number: 4 (lower is better) Translates to: PSLDTTVALSGLCRLQPGVQPRG*PRAIAP Trigger: GGGTGCAATAGCCCTGGGCCACCCCCTGGGCTGCAC...GCCTGGCTGCAGGCGGCACAACCCAGAGAGTGCCACAGTGGTGTCCAGAGAGGG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039784.12 |
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| CDS-3UTR CCA 90 bp | CAGCAGCTCCCATCCCAGTCCCGATGCACATGGACACCACGCCGTAAGCCCGTCGTGCAGCCCAGGGGGTaGCCCAGGGCTATTGCACCC | + |
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Preference number: 4 (lower is better) Translates to: QQLPSQSRCTWTPRRKPVVQPRG*PRAIAP Trigger: GGGTGCAATAGCCCTGGGCCACCCCCTGGGCTGCAC...GACGGGCTTACGGCGTGGTGTCCATGTGCATCGGGACTGGGATGGGAGCTGCTG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000175743.8 |
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| CDS-3UTR TCA 90 bp | CTCACTTCAGCACTGTTCAGGGTACCTGACGGGGCAGTCCCACCCTCTGTTCCAGGGCGATGCGTGCCATaGCAGCCCCGGCTCCTGGCT | + |
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Preference number: 4 (lower is better) Translates to: LTSALFRVPDGAVPPSVPGRCVP*QPRLLA Trigger: AGCCAGGAGCCGGGGCTGTCATGGCACGCATCGCCC...TGGAACAGAGGGTGGGACTGCCCCGTCAGGTACCCTGAACAGTGCTGAAGTGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039784.12 |
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| CDS-3UTR GCA 90 bp | AGTCCCGATGCACATGGACACCACGCCGTAAGCCCGTCTGCCACGACGCTTCAGAGCTTGGCCAGGCCCTaGATGGTGGTGCTGGGACGG | + |
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Preference number: 4 (lower is better) Translates to: SPDAHGHHAVSPSATTLQSLARP*MVVLGR Trigger: CCGTCCCAGCACCACCATGCAGGGCCTGGCCAAGCT...CTGAAGCGTCGTGGCAGACGGGCTTACGGCGTGGTGTCCATGTGCATCGGGACT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175743.8 |
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| CDS-3UTR CCA 90 bp | ACTTCAGCACTGTTCAGGGTACCTGACGGGGCAGTCCCACCCTCTGTTCCAACAGGCCGGCCGGCCAGGTaGCCCAGCACTACCTGCAGC | + |
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Preference number: 4 (lower is better) Translates to: TSALFRVPDGAVPPSVPTGRPAR*PSTTCS Trigger: GCTGCAGGTAGTGCTGGGCCACCTGGCCGGCCGGCC...TGTTGGAACAGAGGGTGGGACTGCCCCGTCAGGTACCCTGAACAGTGCTGAAGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039784.12 |
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| CDS-3UTR CCA 90 bp | CAGTCCCGATGCACATGGACACCACGCCGTAAGCCCGTCTGCCACGACGCTTCATGGCCAGGCCCTGCATaGTGGTGCTGGGACGGACAC | + |
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Preference number: 4 (lower is better) Translates to: QSRCTWTPRRKPVCHDASWPGPA*WCWDGH Trigger: GTGTCCGTCCCAGCACCACCATGCAGGGCCTGGCCA...TGAAGCGTCGTGGCAGACGGGCTTACGGCGTGGTGTCCATGTGCATCGGGACTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175743.8 |
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| CDS-3UTR CCA 90 bp | GACCGCAGCAGCTCCCATCCCAGTCCCGATGCACATGGACACCACGCCGTAAGCAGGCAGGCTTCAGCTTaGCCAGGCCCTGCATGGTGG | + |
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Preference number: 4 (lower is better) Translates to: DRSSSHPSPDAHGHHAVSRQASA*PGPAWW Trigger: CCACCATGCAGGGCCTGGCCAAGCTGAAGCCTGCCT...GCTTACGGCGTGGTGTCCATGTGCATCGGGACTGGGATGGGAGCTGCTGCGGTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175743.8 |
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| CDS-3UTR GCA 90 bp | GACCGCAGCAGCTCCCATCCCAGTCCCGATGCACATGGACACCACGCCGTAAGCAGACGGCCTGCTTTCTaGAAGGCTGCAGGGATGGCA | + |
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Preference number: 4 (lower is better) Translates to: DRSSSHPSPDAHGHHAVSRRPAF*KAAGMA Trigger: TGCCATCCCTGCAGCCTTGCAGAAAGCAGGCCGTCT...GCTTACGGCGTGGTGTCCATGTGCATCGGGACTGGGATGGGAGCTGCTGCGGTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175743.8 |
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| CDS-3UTR GCA 90 bp | CCCTCTCTGGACACCACTGTGGCACTCTCTGGGTTGTGCCGCCTGCAGCCAGGCGTACAGTCTCTGGGATaGCGCTCAGAAATTGGGCGA | + |
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Preference number: 4 (lower is better) Translates to: PSLDTTVALSGLCRLQPGVQSLG*RSEIGR Trigger: TCGCCCAATTTCTGAGCGGCATCCCAGAGACTGTAC...GCCTGGCTGCAGGCGGCACAACCCAGAGAGTGCCACAGTGGTGTCCAGAGAGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039784.12 |
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| CDS-3UTR GCA 90 bp | CCCTCTCTGGACACCACTGTGGCACTCTCTGGGTTGTGCCGCCTGCAGCCAGGCGCTTCTGCCGTGAAATaGCAAACCGCTCAGCCACAT | + |
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Preference number: 4 (lower is better) Translates to: PSLDTTVALSGLCRLQPGASAVK*QTAQPH Trigger: ATGTGGCTGAGCGGTTTGGCATTTCACGGCAGAAGC...GCCTGGCTGCAGGCGGCACAACCCAGAGAGTGCCACAGTGGTGTCCAGAGAGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039784.12 |
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| CDS-3UTR GCA 90 bp | CTTCAGCACTGTTCAGGGTACCTGACGGGGCAGTCCCACCCTCTGTTCCAACATAGCTTGGCCAGGCCCTaGATGGTGGTGCTGGGACGG | + |
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Preference number: 4 (lower is better) Translates to: LQHCSGYLTGQSHPLFQHSLARP*MVVLGR Trigger: CCGTCCCAGCACCACCATGCAGGGCCTGGCCAAGCT...ATGTTGGAACAGAGGGTGGGACTGCCCCGTCAGGTACCCTGAACAGTGCTGAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039784.12 |
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| CDS-3UTR CCA 90 bp | CCCTCTCTGGACACCACTGTGGCACTCTCTGGGTTGTGCCGCCTGCAGCCAGGCGAGTCAGGCAGTCTCTaGCTTTCTCACTCTCCAGCA | + |
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Preference number: 4 (lower is better) Translates to: PSLDTTVALSGLCRLQPGESGSL*LSHSPA Trigger: TGCTGGAGAGTGAGAAAGCCAGAGACTGCCTGACTC...GCCTGGCTGCAGGCGGCACAACCCAGAGAGTGCCACAGTGGTGTCCAGAGAGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039784.12 |
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| CDS-3UTR CCA 90 bp | AGTTCCCAGGGTATTCAAAGACCGCAGCAGCTCCCATCCCAGTCCCGATGCACACCAGGCCCTGCATGGTaGTGCTGGGACGGACACCCT | + |
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Preference number: 4 (lower is better) Translates to: SSQGIQRPQQLPSQSRCTPGPAW*CWDGHP Trigger: AGGGTGTCCGTCCCAGCACCACCATGCAGGGCCTGG...TGTGCATCGGGACTGGGATGGGAGCTGCTGCGGTCTTTGAATACCCTGGGAACT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175743.8 |
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| CDS-3UTR TCA 90 bp | TCAAAGACCGCAGCAGCTCCCATCCCAGTCCCGATGCACATGGACACCACGCCGCGGACACCCTCATCCTaGGACACGGTGATGGTTTTC | + |
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Preference number: 4 (lower is better) Translates to: SKTAAAPIPVPMHMDTTPRTPSS*DTVMVF Trigger: GAAAACCATCACCGTGTCTCAGGATGAGGGTGTCCG...CGGCGTGGTGTCCATGTGCATCGGGACTGGGATGGGAGCTGCTGCGGTCTTTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175743.8 |
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| CDS-3UTR TCA 90 bp | TTCAAAGACCGCAGCAGCTCCCATCCCAGTCCCGATGCACATGGACACCACGCCGCTCCATCACTCACCTaGCTGGAGTTTCCAGCCGTG | + |
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Preference number: 4 (lower is better) Translates to: FKDRSSSHPSPDAHGHHAAPSLT*LEFPAV Trigger: CACGGCTGGAAACTCCAGTCAGGTGAGTGATGGAGC...GGCGTGGTGTCCATGTGCATCGGGACTGGGATGGGAGCTGCTGCGGTCTTTGAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175743.8 |
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| CDS-3UTR CCA 90 bp | ATTCAAAGACCGCAGCAGCTCCCATCCCAGTCCCGATGCACATGGACACCACGCGCAAGGCTGCAGGGATaGCATAGGCAGGTCCGATGC | + |
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Preference number: 4 (lower is better) Translates to: IQRPQQLPSQSRCTWTPRARLQG*HRQVRC Trigger: GCATCGGACCTGCCTATGCCATCCCTGCAGCCTTGC...GCGTGGTGTCCATGTGCATCGGGACTGGGATGGGAGCTGCTGCGGTCTTTGAAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175743.8 |
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| CDS-3UTR CCA 90 bp | CTCACTTCAGCACTGTTCAGGGTACCTGACGGGGCAGTCCCACCCTCTGTTCCACAGTCCCGATGCACATaGACACCACGCCGTAAGCCC | + |
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Preference number: 4 (lower is better) Translates to: LTSALFRVPDGAVPPSVPQSRCT*TPRRKP Trigger: GGGCTTACGGCGTGGTGTCCATGTGCATCGGGACTG...TGGAACAGAGGGTGGGACTGCCCCGTCAGGTACCCTGAACAGTGCTGAAGTGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039784.12 |
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| CDS-3UTR CCA 90 bp | GAGTTTCCAGCCGTGGTAGAGCCTCCATCCTTGAAGGCAGGCTTCAGCTTGGCCGGGCGCTTGTTCTGCTaGGAGGCCAGCGCAAAGTCA | + |
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Preference number: 4 (lower is better) Translates to: EFPAVVEPPSLKAGFSLAGRLFC*EASAKS Trigger: TGACTTTGCGCTGGCCTCCCAGCAGAACAAGCGCCC...GGCCAAGCTGAAGCCTGCCTTCAAGGATGGAGGCTCTACCACGGCTGGAAACTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176546.2 |
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| CDS-3UTR TCA 90 bp | CTCACTTCAGCACTGTTCAGGGTACCTGACGGGGCAGTCCCACCCTCTGTTCCAGCTCCATCACTCACCTaGCTGGAGTTTCCAGCCGTG | + |
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Preference number: 4 (lower is better) Translates to: LTSALFRVPDGAVPPSVPAPSLT*LEFPAV Trigger: CACGGCTGGAAACTCCAGTCAGGTGAGTGATGGAGC...TGGAACAGAGGGTGGGACTGCCCCGTCAGGTACCCTGAACAGTGCTGAAGTGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039784.12 |
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| CDS-3UTR GCA 90 bp | CAGCTCCCATCCCAGTCCCGATGCACATGGACACCACGCCGTAAGCCCGTCTGCAAGTCATCCTGCTTCTaGCGTGAAATGCCAAACCGC | + |
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Preference number: 4 (lower is better) Translates to: QLPSQSRCTWTPRRKPVCKSSCF*REMPNR Trigger: GCGGTTTGGCATTTCACGGCAGAAGCAGGATGACTT...GCAGACGGGCTTACGGCGTGGTGTCCATGTGCATCGGGACTGGGATGGGAGCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175743.8 |
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| CDS-3UTR GCA 90 bp | CCCAGTCCCGATGCACATGGACACCACGCCGTAAGCCCGTCTGCCACGACGCTTAGCGCAAAGTCATCCTaGTTCTGCCGTGAAATGCCA | + |
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Preference number: 4 (lower is better) Translates to: PSPDAHGHHAVSPSATTLSAKSS*FCREMP Trigger: TGGCATTTCACGGCAGAAGCAGGATGACTTTGCGCT...AAGCGTCGTGGCAGACGGGCTTACGGCGTGGTGTCCATGTGCATCGGGACTGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175743.8 |
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| CDS-3UTR GCA 90 bp | CTTCAGCACTGTTCAGGGTACCTGACGGGGCAGTCCCACCCTCTGTTCCAACATCCATCCCAGTCCCGATaGACATGGACACCACGCCGT | + |
|
Preference number: 4 (lower is better) Translates to: LQHCSGYLTGQSHPLFQHPSQSR*TWTPRR Trigger: ACGGCGTGGTGTCCATGTGCATCGGGACTGGGATGG...ATGTTGGAACAGAGGGTGGGACTGCCCCGTCAGGTACCCTGAACAGTGCTGAAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039784.12 |
||
| CDS-3UTR CCA 90 bp | CTTCAGCACTGTTCAGGGTACCTGACGGGGCAGTCCCACCCTCTGTTCCAACATTCCCAGACAGGGACATaGACTCCACCCCACAGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LQHCSGYLTGQSHPLFQHSQTGT*TPPHRP Trigger: TGGCCTGTGGGGTGGAGTCCATGTCCCTGTCTGGGA...ATGTTGGAACAGAGGGTGGGACTGCCCCGTCAGGTACCCTGAACAGTGCTGAAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039784.12 |
||
| CDS-3UTR CCA 90 bp | CTCACTTCAGCACTGTTCAGGGTACCTGACGGGGCAGTCCCACCCTCTGTTCCACTTGCTGCCTTCTGCTaGGAGGCCAGCGCAAAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: LTSALFRVPDGAVPPSVPLAAFC*EASAKS Trigger: TGACTTTGCGCTGGCCTCCCAGCAGAAGGCAGCAAG...TGGAACAGAGGGTGGGACTGCCCCGTCAGGTACCCTGAACAGTGCTGAAGTGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039784.12 |
||
| CDS-3UTR CCA 90 bp | TCCCAGGGTATTCAAAGACCGCAGCAGCTCCCATCCCAGTCCCGATGCACATGGCTTGCTGCCTTCTGCTaGGAGGCCAGCGCAAAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: SQGIQRPQQLPSQSRCTWLAAFC*EASAKS Trigger: TGACTTTGCGCTGGCCTCCCAGCAGAAGGCAGCAAG...CCATGTGCATCGGGACTGGGATGGGAGCTGCTGCGGTCTTTGAATACCCTGGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175743.8 |
||
| CDS-3UTR CCA 90 bp | CACTGTTCAGGGTACCTGACGGGGCAGTCCCACCCTCTGTTCCAACATCAATTACCAGGCCCTGCATGGTaGTGCTGGGACGGACACCCT | + |
|
Preference number: 4 (lower is better) Translates to: HCSGYLTGQSHPLFQHQLPGPAW*CWDGHP Trigger: AGGGTGTCCGTCCCAGCACCACCATGCAGGGCCTGG...TAATTGATGTTGGAACAGAGGGTGGGACTGCCCCGTCAGGTACCCTGAACAGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039784.12 |
||
| CDS-3UTR CCA 90 bp | CACTGTTCAGGGTACCTGACGGGGCAGTCCCACCCTCTGTTCCAACATCAATTATGGCCAGGCCCTGCATaGTGGTGCTGGGACGGACAC | + |
|
Preference number: 4 (lower is better) Translates to: HCSGYLTGQSHPLFQHQLWPGPA*WCWDGH Trigger: GTGTCCGTCCCAGCACCACCATGCAGGGCCTGGCCA...TAATTGATGTTGGAACAGAGGGTGGGACTGCCCCGTCAGGTACCCTGAACAGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039784.12 |
||
| CDS-3UTR TCA 90 bp | CTCACTTCAGCACTGTTCAGGGTACCTGACGGGGCAGTCCCACCCTCTGTTCCACGGACACCCTCATCCTaGGACACGGTGATGGTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: LTSALFRVPDGAVPPSVPRTPSS*DTVMVF Trigger: GAAAACCATCACCGTGTCTCAGGATGAGGGTGTCCG...TGGAACAGAGGGTGGGACTGCCCCGTCAGGTACCCTGAACAGTGCTGAAGTGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039784.12 |
||
| CDS-3UTR CCA 90 bp | CTCACTTCAGCACTGTTCAGGGTACCTGACGGGGCAGTCCCACCCTCTGTTCCATTTAGCCTCACGTCCTaGAGAACCGCGGTCAACACG | + |
|
Preference number: 4 (lower is better) Translates to: LTSALFRVPDGAVPPSVPFSLTS*RTAVNT Trigger: CGTGTTGACCGCGGTTCTCCAGGACGTGAGGCTAAA...TGGAACAGAGGGTGGGACTGCCCCGTCAGGTACCCTGAACAGTGCTGAAGTGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039784.12 |
||
| CDS-3UTR CCA 90 bp | CCAGGGTATTCAAAGACCGCAGCAGCTCCCATCCCAGTCCCGATGCACATGGACTTTAGCCTCACGTCCTaGAGAACCGCGGTCAACACG | + |
|
Preference number: 4 (lower is better) Translates to: PGYSKTAAAPIPVPMHMDFSLTS*RTAVNT Trigger: CGTGTTGACCGCGGTTCTCCAGGACGTGAGGCTAAA...GTCCATGTGCATCGGGACTGGGATGGGAGCTGCTGCGGTCTTTGAATACCCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175743.8 |
||
| CDS-3UTR CCA 90 bp | CACTGTTCAGGGTACCTGACGGGGCAGTCCCACCCTCTGTTCCAACATCAATTAAGGCAGGCTTCAGCTTaGCCAGGCCCTGCATGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: HCSGYLTGQSHPLFQHQLRQASA*PGPAWW Trigger: CCACCATGCAGGGCCTGGCCAAGCTGAAGCCTGCCT...TAATTGATGTTGGAACAGAGGGTGGGACTGCCCCGTCAGGTACCCTGAACAGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039784.12 |
||
| CDS-3UTR CCA 90 bp | CTTCAGCACTGTTCAGGGTACCTGACGGGGCAGTCCCACCCTCTGTTCCAACATTCAGGACCCCAAGGATaGGGAGGCCCAGTTCTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: LQHCSGYLTGQSHPLFQHSGPQG*GGPVLQ Trigger: CTGAAGAACTGGGCCTCCCCATCCTTGGGGTCCTGA...ATGTTGGAACAGAGGGTGGGACTGCCCCGTCAGGTACCCTGAACAGTGCTGAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039784.12 |
||
| CDS-3UTR CCA 90 bp | CAGGGTATTCAAAGACCGCAGCAGCTCCCATCCCAGTCCCGATGCACATGGACATCAGGACCCCAAGGATaGGGAGGCCCAGTTCTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: QGIQRPQQLPSQSRCTWTSGPQG*GGPVLQ Trigger: CTGAAGAACTGGGCCTCCCCATCCTTGGGGTCCTGA...TGTCCATGTGCATCGGGACTGGGATGGGAGCTGCTGCGGTCTTTGAATACCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175743.8 |
||
| CDS-3UTR TCA 90 bp | TATTCAAAGACCGCAGCAGCTCCCATCCCAGTCCCGATGCACATGGACACCACGATCCTGCTTCTGCCGTaGAATGCCAAACCGCTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: YSKTAAAPIPVPMHMDTTILLLP*NAKPLS Trigger: GCTGAGCGGTTTGGCATTTCACGGCAGAAGCAGGAT...CGTGGTGTCCATGTGCATCGGGACTGGGATGGGAGCTGCTGCGGTCTTTGAATA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175743.8 |
||
| CDS-3UTR GCA 90 bp | CCAGGGTATTCAAAGACCGCAGCAGCTCCCATCCCAGTCCCGATGCACATGGACGCTTCTGCCGTGAAATaGCAAACCGCTCAGCCACAT | + |
|
Preference number: 4 (lower is better) Translates to: PGYSKTAAAPIPVPMHMDASAVK*QTAQPH Trigger: ATGTGGCTGAGCGGTTTGGCATTTCACGGCAGAAGC...GTCCATGTGCATCGGGACTGGGATGGGAGCTGCTGCGGTCTTTGAATACCCTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175743.8 |
||
| CDS-3UTR CCA 90 bp | GGGTATTCAAAGACCGCAGCAGCTCCCATCCCAGTCCCGATGCACATGGACACCGAGTCAGGCAGTCTCTaGCTTTCTCACTCTCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: GYSKTAAAPIPVPMHMDTESGSL*LSHSPA Trigger: TGCTGGAGAGTGAGAAAGCCAGAGACTGCCTGACTC...GGTGTCCATGTGCATCGGGACTGGGATGGGAGCTGCTGCGGTCTTTGAATACCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175743.8 |
||
| CDS-3UTR CCA 90 bp | CACTGTTCAGGGTACCTGACGGGGCAGTCCCACCCTCTGTTCCAACATCAATTAGCAAGGCTGCAGGGATaGCATAGGCAGGTCCGATGC | + |
|
Preference number: 4 (lower is better) Translates to: HCSGYLTGQSHPLFQHQLARLQG*HRQVRC Trigger: GCATCGGACCTGCCTATGCCATCCCTGCAGCCTTGC...TAATTGATGTTGGAACAGAGGGTGGGACTGCCCCGTCAGGTACCCTGAACAGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039784.12 |
||
| CDS-3UTR GCA 90 bp | GTATTCAAAGACCGCAGCAGCTCCCATCCCAGTCCCGATGCACATGGACACCACGTACAGTCTCTGGGATaGCGCTCAGAAATTGGGCGA | + |
|
Preference number: 4 (lower is better) Translates to: VFKDRSSSHPSPDAHGHHVQSLG*RSEIGR Trigger: TCGCCCAATTTCTGAGCGGCATCCCAGAGACTGTAC...GTGGTGTCCATGTGCATCGGGACTGGGATGGGAGCTGCTGCGGTCTTTGAATAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175743.8 |
||
| CDS-3UTR GCA 90 bp | CTCACTTCAGCACTGTTCAGGGTACCTGACGGGGCAGTCCCACCCTCTGTTCCAAGCGCAAAGTCATCCTaGTTCTGCCGTGAAATGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LTSALFRVPDGAVPPSVPSAKSS*FCREMP Trigger: TGGCATTTCACGGCAGAAGCAGGATGACTTTGCGCT...TGGAACAGAGGGTGGGACTGCCCCGTCAGGTACCCTGAACAGTGCTGAAGTGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039784.12 |
||
| CDS-3UTR CCA 90 bp | GTCATTCACAGTCAGCCCTGCTTTCTGCAAGGCTGCAGGGATGGCATAGGCAGGGAGTCAGGCAGTCTCTaGCTTTCTCACTCTCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: VIHSQPCFLQGCRDGIGRESGSL*LSHSPA Trigger: TGCTGGAGAGTGAGAAAGCCAGAGACTGCCTGACTC...CCTGCCTATGCCATCCCTGCAGCCTTGCAGAAAGCAGGGCTGACTGTGAATGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176546.2 |
||
| CDS-3UTR TCA 90 bp | CACTGTTCAGGGTACCTGACGGGGCAGTCCCACCCTCTGTTCCAACATCAATTAATCCTGCTTCTGCCGTaGAATGCCAAACCGCTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: HCSGYLTGQSHPLFQHQLILLLP*NAKPLS Trigger: GCTGAGCGGTTTGGCATTTCACGGCAGAAGCAGGAT...TAATTGATGTTGGAACAGAGGGTGGGACTGCCCCGTCAGGTACCCTGAACAGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039784.12 |
||
| CDS-3UTR GCA 90 bp | CTTCAGCACTGTTCAGGGTACCTGACGGGGCAGTCCCACCCTCTGTTCCAACATAAGTCATCCTGCTTCTaGCGTGAAATGCCAAACCGC | + |
|
Preference number: 4 (lower is better) Translates to: LQHCSGYLTGQSHPLFQHKSSCF*REMPNR Trigger: GCGGTTTGGCATTTCACGGCAGAAGCAGGATGACTT...ATGTTGGAACAGAGGGTGGGACTGCCCCGTCAGGTACCCTGAACAGTGCTGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039784.12 |
||
| CDS-3UTR CCA 90 bp | TCCCAGGGTATTCAAAGACCGCAGCAGCTCCCATCCCAGTCCCGATGCACATGGTGTCATCCAGGACAGTaGTTGTCACAGGCACAATCT | + |
|
Preference number: 4 (lower is better) Translates to: SQGIQRPQQLPSQSRCTWCHPGQ*LSQAQS Trigger: AGATTGTGCCTGTGACAACCACTGTCCTGGATGACA...CCATGTGCATCGGGACTGGGATGGGAGCTGCTGCGGTCTTTGAATACCCTGGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175743.8 |
||
| CDS-3UTR TCA 90 bp | CTTCAGCACTGTTCAGGGTACCTGACGGGGCAGTCCCACCCTCTGTTCCAACATCATAAGACCCATTTCTaGTGCCACCAGCAATGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: LQHCSGYLTGQSHPLFQHHKTHF*CHQQCW Trigger: CCAACATTGCTGGTGGCATCAGAAATGGGTCTTATG...ATGTTGGAACAGAGGGTGGGACTGCCCCGTCAGGTACCCTGAACAGTGCTGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039784.12 |
||
| CDS-3UTR TCA 90 bp | GTTCCCAGGGTATTCAAAGACCGCAGCAGCTCCCATCCCAGTCCCGATGCACATCATAAGACCCATTTCTaGTGCCACCAGCAATGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: VPRVFKDRSSSHPSPDAHHKTHF*CHQQCW Trigger: CCAACATTGCTGGTGGCATCAGAAATGGGTCTTATG...ATGTGCATCGGGACTGGGATGGGAGCTGCTGCGGTCTTTGAATACCCTGGGAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175743.8 |
||
| CDS-3UTR GCA 90 bp | GCTGGGACGGACACCCTCATCCTGAGACACGGTGATGGTTTTCTTGTCACCCTTAGCGCAAAGTCATCCTaGTTCTGCCGTGAAATGCCA | + |
|
Preference number: 4 (lower is better) Translates to: AGTDTLILRHGDGFLVTLSAKSS*FCREMP Trigger: TGGCATTTCACGGCAGAAGCAGGATGACTTTGCGCT...AAGGGTGACAAGAAAACCATCACCGTGTCTCAGGATGAGGGTGTCCGTCCCAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176546.2 |
||
| CDS-3UTR CCA 90 bp | CTTCAGCACTGTTCAGGGTACCTGACGGGGCAGTCCCACCCTCTGTTCCAACATTGTCATCCAGGACAGTaGTTGTCACAGGCACAATCT | + |
|
Preference number: 4 (lower is better) Translates to: LQHCSGYLTGQSHPLFQHCHPGQ*LSQAQS Trigger: AGATTGTGCCTGTGACAACCACTGTCCTGGATGACA...ATGTTGGAACAGAGGGTGGGACTGCCCCGTCAGGTACCCTGAACAGTGCTGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039784.12 |
||
| CDS-3UTR TCA 90 bp | CTCACTTCAGCACTGTTCAGGGTACCTGACGGGGCAGTCCCACCCTCTGTTCCATTGCAAAGGCCTCATTaGTCTCAAAGATGTCTATGT | + |
|
Preference number: 4 (lower is better) Translates to: LTSALFRVPDGAVPPSVPLQRPH*SQRCLC Trigger: ACATAGACATCTTTGAGATCAATGAGGCCTTTGCAA...TGGAACAGAGGGTGGGACTGCCCCGTCAGGTACCCTGAACAGTGCTGAAGTGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039784.12 |
||
| CDS-3UTR GCA 90 bp | GATCTCAAAGATGTCTATGTCATTCACAGTCAGCCCTGCTTTCTGCAAGGCTGCGCTTCTGCCGTGAAATaGCAAACCGCTCAGCCACAT | + |
|
Preference number: 4 (lower is better) Translates to: DLKDVYVIHSQPCFLQGCASAVK*QTAQPH Trigger: ATGTGGCTGAGCGGTTTGGCATTTCACGGCAGAAGC...GCAGCCTTGCAGAAAGCAGGGCTGACTGTGAATGACATAGACATCTTTGAGATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176546.2 |
||
| CDS-3UTR GCA 90 bp | CTCATTGATCTCAAAGATGTCTATGTCATTCACAGTCAGCCCTGCTTTCTGCAATCTGGGCGCTTGTTCTaGTGGGAGGCCAGCGCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: LIDLKDVYVIHSQPCFLQSGRLF*WEASAK Trigger: CTTTGCGCTGGCCTCCCAGCAGAACAAGCGCCCAGA...TTGCAGAAAGCAGGGCTGACTGTGAATGACATAGACATCTTTGAGATCAATGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176546.2 |
||
| CDS-3UTR TCA 90 bp | TTGATCTCAAAGATGTCTATGTCATTCACAGTCAGCCCTGCTTTCTGCAAGGCTATCCTGCTTCTGCCGTaGAATGCCAAACCGCTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LISKMSMSFTVSPAFCKAILLLP*NAKPLS Trigger: GCTGAGCGGTTTGGCATTTCACGGCAGAAGCAGGAT...AGCCTTGCAGAAAGCAGGGCTGACTGTGAATGACATAGACATCTTTGAGATCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176546.2 |
||
| CDS-3UTR GCA 90 bp | GTAGACGGCCTGACTTGCAAAGGCCTCATTGATCTCAAAGATGTCTATGTCATTAAGTCATCCTGCTTCTaGCGTGAAATGCCAAACCGC | + |
|
Preference number: 4 (lower is better) Translates to: VDGLTCKGLIDLKDVYVIKSSCF*REMPNR Trigger: GCGGTTTGGCATTTCACGGCAGAAGCAGGATGACTT...AATGACATAGACATCTTTGAGATCAATGAGGCCTTTGCAAGTCAGGCCGTCTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176546.2 |
||
| CDS-3UTR TCA 90 bp | CTTGCAAAGGCCTCATTGATCTCAAAGATGTCTATGTCATTCACAGTCAGCCCTCATAAGACCCATTTCTaGTGCCACCAGCAATGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: LAKASLISKMSMSFTVSPHKTHF*CHQQCW Trigger: CCAACATTGCTGGTGGCATCAGAAATGGGTCTTATG...AGGGCTGACTGTGAATGACATAGACATCTTTGAGATCAATGAGGCCTTTGCAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176546.2 |
||
| CDS TCA 90 bp | CCGCGGTCAACACGGCCGACAGAAGCTCGTCGGGGGTGGTGTTCTTaGAGCCTCCACGGCTGGCGCGGCCGATGGGGGTGCGCCGTCCGT | + |
|
Preference number: 5 (lower is better) Translates to: PRSTRPTEARRGWCS*SLHGWRGRWGCAVR Trigger: ACGGACGGCGCACCCCCATCGGCCGCGCCAGCCGTGGAGGCTTCAAGAACACCACCCCCGACGAGCTTCTGTCGGCCGTGTTGACCGCGG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000039784.12 ENSMUST00000175743.8 ENSMUST00000176351.8 ENSMUST00000176397.8 ENSMUST00000177463.8 |
||
| CDS-3UTR CAA 90 bp | CCCTCTCTGGACACCACTGTGGCACTCTCTGGGTTGTGCCGCCTGCAGCCAGGCTCGGGGGTGGTGTTCTaGAAGCCTCCACGGCTGGCG | + |
|
Preference number: 5 (lower is better) Translates to: PSLDTTVALSGLCRLQPGSGVVF*KPPRLA Trigger: CGCCAGCCGTGGAGGCTTCAAGAACACCACCCCCGA...GCCTGGCTGCAGGCGGCACAACCCAGAGAGTGCCACAGTGGTGTCCAGAGAGGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039784.12 |
||
| CDS-3UTR CAA 90 bp | CAGCTCCCATCCCAGTCCCGATGCACATGGACACCACGCCGTAAGCCCGTCTGCCTCTGCTCTGGGCGCTaGCTGCCTTCTGCTGGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: QLPSQSRCTWTPRRKPVCLCSGR*LPSAGR Trigger: CCTCCCAGCAGAAGGCAGCAAGCGCCCAGAGCAGAG...GCAGACGGGCTTACGGCGTGGTGTCCATGTGCATCGGGACTGGGATGGGAGCTG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175743.8 |
||
| CDS CCA 90 bp | CCCACGGAGATGTCTCCCAGCTGCTCAGGCTTTAGCCTCACGTCCTaGAGAACCGCGGTCAACACGGCCGACAGAAGCTCGTCGGGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: PTEMSPSCSGFSLTS*RTAVNTADRSSSGV Trigger: CACCCCCGACGAGCTTCTGTCGGCCGTGTTGACCGCGGTTCTCCAGGACGTGAGGCTAAAGCCTGAGCAGCTGGGAGACATCTCCGTGGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000039784.12 ENSMUST00000175743.8 ENSMUST00000176351.8 ENSMUST00000176397.8 ENSMUST00000177463.8 |
||
| CDS-3UTR CAA 90 bp | TCCGATGCCCATGACGTCAGGAGGGACCCCGACCACTGCATAGGACCTCAGGACCTCTGCTCTGGGCGCTaGTTCTGCTGGGAGGCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: SDAHDVRRDPDHCIGPQDLCSGR*FCWEAS Trigger: GCTGGCCTCCCAGCAGAACAAGCGCCCAGAGCAGAG...GTCCTGAGGTCCTATGCAGTGGTCGGGGTCCCTCCTGACGTCATGGGCATCGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176546.2 |
||
| CDS GCA 90 bp | GCCCGTCTGCCACGACGCTTCAGTTCATTGAGTAGCGTGACAACCTaGCTTGCTCCCGTGCAGCCCAGGGGGTGGCCCAGGGCTATTGCA | + |
|
Preference number: 5 (lower is better) Translates to: ARLPRRFSSLSSVTT*LAPVQPRGWPRAIA Trigger: TGCAATAGCCCTGGGCCACCCCCTGGGCTGCACGGGAGCAAGGCAGGTTGTCACGCTACTCAATGAACTGAAGCGTCGTGGCAGACGGGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039784.12 ENSMUST00000176397.8 |
||
| CDS-3UTR CAA 90 bp | GACCGCAGCAGCTCCCATCCCAGTCCCGATGCACATGGACACCACGCCGTAAGCATGCCACCAGCAATGTaGGCCACTGCCTGCAGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: DRSSSHPSPDAHGHHAVSMPPAM*ATACSP Trigger: GGGACTGCAGGCAGTGGCCAACATTGCTGGTGGCAT...GCTTACGGCGTGGTGTCCATGTGCATCGGGACTGGGATGGGAGCTGCTGCGGTC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175743.8 |
||
| CDS-3UTR CAA 90 bp | GCCCATGACGTCAGGAGGGACCCCGACCACTGCATAGGACCTCAGGACCCCAAGATGCCACCAGCAATGTaGGCCACTGCCTGCAGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: AHDVRRDPDHCIGPQDPKMPPAM*ATACSP Trigger: GGGACTGCAGGCAGTGGCCAACATTGCTGGTGGCAT...CTTGGGGTCCTGAGGTCCTATGCAGTGGTCGGGGTCCCTCCTGACGTCATGGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176546.2 |
||
| CDS-3UTR CAA 90 bp | CTCACTTCAGCACTGTTCAGGGTACCTGACGGGGCAGTCCCACCCTCTGTTCCACTCTGCTCTGGGCGCTaGCTGCCTTCTGCTGGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: LTSALFRVPDGAVPPSVPLCSGR*LPSAGR Trigger: CCTCCCAGCAGAAGGCAGCAAGCGCCCAGAGCAGAG...TGGAACAGAGGGTGGGACTGCCCCGTCAGGTACCCTGAACAGTGCTGAAGTGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039784.12 |
||
| CDS GCA 90 bp | CCGGCTCCTGGCTCAAGAACATTGCCCACGGAGATGTCTCCCAGCTaGTCAGGCTTTAGCCTCACGTCCTGGAGAACCGCGGTCAACACG | + |
|
Preference number: 5 (lower is better) Translates to: PAPGSRTLPTEMSPS*SGFSLTSWRTAVNT Trigger: CGTGTTGACCGCGGTTCTCCAGGACGTGAGGCTAAAGCCTGAGCAGCTGGGAGACATCTCCGTGGGCAATGTTCTTGAGCCAGGAGCCGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000039784.12 ENSMUST00000175743.8 ENSMUST00000176351.8 ENSMUST00000176397.8 ENSMUST00000177463.8 |
||
| CDS-3UTR CAA 90 bp | CAGGGTATTCAAAGACCGCAGCAGCTCCCATCCCAGTCCCGATGCACATGGACATCGGGGGTGGTGTTCTaGAAGCCTCCACGGCTGGCG | + |
|
Preference number: 5 (lower is better) Translates to: QGIQRPQQLPSQSRCTWTSGVVF*KPPRLA Trigger: CGCCAGCCGTGGAGGCTTCAAGAACACCACCCCCGA...TGTCCATGTGCATCGGGACTGGGATGGGAGCTGCTGCGGTCTTTGAATACCCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000175743.8 |
||
| CDS-3UTR CAA 90 bp | CTTCAGCACTGTTCAGGGTACCTGACGGGGCAGTCCCACCCTCTGTTCCAACATCCCAGTTCTTCAGCCTaGGACCTCCGAGCCAGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: LQHCSGYLTGQSHPLFQHPSSSA*DLRASR Trigger: CCTGCTGGCTCGGAGGTCCAAGGCTGAAGAACTGGG...ATGTTGGAACAGAGGGTGGGACTGCCCCGTCAGGTACCCTGAACAGTGCTGAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039784.12 |
||
| CDS-3UTR CAA 90 bp | TATTCAAAGACCGCAGCAGCTCCCATCCCAGTCCCGATGCACATGGACACCACGCCCAGTTCTTCAGCCTaGGACCTCCGAGCCAGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: YSKTAAAPIPVPMHMDTTPSSSA*DLRASR Trigger: CCTGCTGGCTCGGAGGTCCAAGGCTGAAGAACTGGG...CGTGGTGTCCATGTGCATCGGGACTGGGATGGGAGCTGCTGCGGTCTTTGAATA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175743.8 |
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| CDS TCA 90 bp | GTACAGTCTCTGGGATGCCGCTCAGAAATTGGGCGATGCGTGCCATaGCAGCCCCGGCTCCTGGCTCAAGAACATTGCCCACGGAGATGT | + |
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Preference number: 5 (lower is better) Translates to: VQSLGCRSEIGRCVP*QPRLLAQEHCPRRC Trigger: ACATCTCCGTGGGCAATGTTCTTGAGCCAGGAGCCGGGGCTGTCATGGCACGCATCGCCCAATTTCTGAGCGGCATCCCAGAGACTGTAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039784.12 ENSMUST00000175743.8 ENSMUST00000176397.8 ENSMUST00000177463.8 |
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| CDS GCA 90 bp | TCTGCTGGGAGGCCAGCGCAAAGTCATCCTGCTTCTGCCGTGAAATaGCAAACCGCTCAGCCACATTCTCCGAGGTCATCCCACAGGCCA | + |
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Preference number: 5 (lower is better) Translates to: SAGRPAQSHPASAVK*QTAQPHSPRSSHRP Trigger: TGGCCTGTGGGATGACCTCGGAGAATGTGGCTGAGCGGTTTGGCATTTCACGGCAGAAGCAGGATGACTTTGCGCTGGCCTCCCAGCAGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176397.8 |
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| CDS GCA 90 bp | GGGCGCTTGTTCTGCTGGGAGGCCAGCGCAAAGTCATCCTGCTTCTaGCGTGAAATGCCAAACCGCTCAGCCACATTCTCCGAGGTCATC | + |
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Preference number: 5 (lower is better) Translates to: GRLFCWEASAKSSCF*REMPNRSATFSEVI Trigger: GATGACCTCGGAGAATGTGGCTGAGCGGTTTGGCATTTCACGGCAGAAGCAGGATGACTTTGCGCTGGCCTCCCAGCAGAACAAGCGCCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176546.2 |
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| CDS GCA 90 bp | TGCTCTGGGCGCTTGTTCTGCTGGGAGGCCAGCGCAAAGTCATCCTaGTTCTGCCGTGAAATGCCAAACCGCTCAGCCACATTCTCCGAG | + |
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Preference number: 5 (lower is better) Translates to: CSGRLFCWEASAKSS*FCREMPNRSATFSE Trigger: CTCGGAGAATGTGGCTGAGCGGTTTGGCATTTCACGGCAGAAGCAGGATGACTTTGCGCTGGCCTCCCAGCAGAACAAGCGCCCAGAGCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176546.2 |
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| CDS CCA 90 bp | GGTATTCAAAGACCGCAGCAGCTCCCATCCCAGTCCCGATGCACATaGACACCACGCCGTAAGCCCGTCTGCCACGACGCTTCAGTTCAT | + |
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Preference number: 5 (lower is better) Translates to: GIQRPQQLPSQSRCT*TPRRKPVCHDASVH Trigger: ATGAACTGAAGCGTCGTGGCAGACGGGCTTACGGCGTGGTGTCCATGTGCATCGGGACTGGGATGGGAGCTGCTGCGGTCTTTGAATACC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039784.12 ENSMUST00000176397.8 |
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| CDS TCA 90 bp | TGCCTTCTGCTGGGAGGCCAGCGCAAAGTCATCCTGCTTCTGCCGTaGAATGCCAAACCGCTCAGCCACATTCTCCGAGGTCATCCCCAT | + |
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Preference number: 5 (lower is better) Translates to: CLLLGGQRKVILLLP*NAKPLSHILRGHPH Trigger: ATGGGGATGACCTCGGAGAATGTGGCTGAGCGGTTTGGCATTTCACGGCAGAAGCAGGATGACTTTGCGCTGGCCTCCCAGCAGAAGGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039784.12 ENSMUST00000175743.8 |
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| CDS TCA 90 bp | TGCCTTCTGCTGGGAGGCCAGCGCAAAGTCATCCTGCTTCTGCCGTaGAATGCCAAACCGCTCAGCCACATTCTCCGAGGTCATCCCACA | + |
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Preference number: 5 (lower is better) Translates to: CLLLGGQRKVILLLP*NAKPLSHILRGHPT Trigger: TGTGGGATGACCTCGGAGAATGTGGCTGAGCGGTTTGGCATTTCACGGCAGAAGCAGGATGACTTTGCGCTGGCCTCCCAGCAGAAGGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176397.8 |
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| CDS GCA 90 bp | CTTGCTGCCTTCTGCTGGGAGGCCAGCGCAAAGTCATCCTGCTTCTaGCGTGAAATGCCAAACCGCTCAGCCACATTCTCCGAGGTCATC | + |
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Preference number: 5 (lower is better) Translates to: LAAFCWEASAKSSCF*REMPNRSATFSEVI Trigger: GATGACCTCGGAGAATGTGGCTGAGCGGTTTGGCATTTCACGGCAGAAGCAGGATGACTTTGCGCTGGCCTCCCAGCAGAAGGCAGCAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039784.12 ENSMUST00000175743.8 ENSMUST00000176397.8 |
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| CDS TCA 90 bp | CTTGTTCTGCTGGGAGGCCAGCGCAAAGTCATCCTGCTTCTGCCGTaGAATGCCAAACCGCTCAGCCACATTCTCCGAGGTCATCCCCAT | + |
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Preference number: 5 (lower is better) Translates to: LVLLGGQRKVILLLP*NAKPLSHILRGHPH Trigger: ATGGGGATGACCTCGGAGAATGTGGCTGAGCGGTTTGGCATTTCACGGCAGAAGCAGGATGACTTTGCGCTGGCCTCCCAGCAGAACAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176546.2 |
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| CDS-3UTR CAA 90 bp | CAGCAGCTCCCATCCCAGTCCCGATGCACATGGACACCACGCCGTAAGCCCGTCGATGAACACTGTCTGTaGACCGTAGACAAAGGTACA | + |
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Preference number: 5 (lower is better) Translates to: QQLPSQSRCTWTPRRKPVDEHCL*TVDKGT Trigger: TGTACCTTTGTCTACGGTCAACAGACAGTGTTCATC...GACGGGCTTACGGCGTGGTGTCCATGTGCATCGGGACTGGGATGGGAGCTGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175743.8 |
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| CDS-3UTR CAA 90 bp | CACTGTTCAGGGTACCTGACGGGGCAGTCCCACCCTCTGTTCCAACATCAATTAATGCCACCAGCAATGTaGGCCACTGCCTGCAGTCCC | + |
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Preference number: 5 (lower is better) Translates to: HCSGYLTGQSHPLFQHQLMPPAM*ATACSP Trigger: GGGACTGCAGGCAGTGGCCAACATTGCTGGTGGCAT...TAATTGATGTTGGAACAGAGGGTGGGACTGCCCCGTCAGGTACCCTGAACAGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039784.12 |
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| CDS-3UTR CAA 90 bp | CTTCAGCACTGTTCAGGGTACCTGACGGGGCAGTCCCACCCTCTGTTCCAACATGTAGAGCCTCCATCCTaGAAGGCAGGCTTCAGCTTG | + |
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Preference number: 5 (lower is better) Translates to: LQHCSGYLTGQSHPLFQHVEPPS*KAGFSL Trigger: CAAGCTGAAGCCTGCCTTCAAGGATGGAGGCTCTAC...ATGTTGGAACAGAGGGTGGGACTGCCCCGTCAGGTACCCTGAACAGTGCTGAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039784.12 |
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| CDS-3UTR CAA 90 bp | AGGGTATTCAAAGACCGCAGCAGCTCCCATCCCAGTCCCGATGCACATGGACACGTAGAGCCTCCATCCTaGAAGGCAGGCTTCAGCTTG | + |
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Preference number: 5 (lower is better) Translates to: RVFKDRSSSHPSPDAHGHVEPPS*KAGFSL Trigger: CAAGCTGAAGCCTGCCTTCAAGGATGGAGGCTCTAC...GTGTCCATGTGCATCGGGACTGGGATGGGAGCTGCTGCGGTCTTTGAATACCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175743.8 |
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| CDS-3UTR CAA 90 bp | CTTCAGCACTGTTCAGGGTACCTGACGGGGCAGTCCCACCCTCTGTTCCAACATGATGAACACTGTCTGTaGACCGTAGACAAAGGTACA | + |
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Preference number: 5 (lower is better) Translates to: LQHCSGYLTGQSHPLFQHDEHCL*TVDKGT Trigger: TGTACCTTTGTCTACGGTCAACAGACAGTGTTCATC...ATGTTGGAACAGAGGGTGGGACTGCCCCGTCAGGTACCCTGAACAGTGCTGAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039784.12 |
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| CDS-3UTR CAA 90 bp | AGCTGCTCCATCACTCACCTGACTGGAGTTTCCAGCCGTGGTAGAGCCTCCATCGATGAACACTGTCTGTaGACCGTAGACAAAGGTACA | + |
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Preference number: 5 (lower is better) Translates to: SCSITHLTGVSSRGRASIDEHCL*TVDKGT Trigger: TGTACCTTTGTCTACGGTCAACAGACAGTGTTCATC...GATGGAGGCTCTACCACGGCTGGAAACTCCAGTCAGGTGAGTGATGGAGCAGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176546.2 |
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| CDS-3UTR CAA 90 bp | CTTCAGCACTGTTCAGGGTACCTGACGGGGCAGTCCCACCCTCTGTTCCAACATCTTGCAAAGGCCTCATaGATCTCAAAGATGTCTATG | + |
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Preference number: 5 (lower is better) Translates to: LQHCSGYLTGQSHPLFQHLAKAS*ISKMSM Trigger: CATAGACATCTTTGAGATCAATGAGGCCTTTGCAAG...ATGTTGGAACAGAGGGTGGGACTGCCCCGTCAGGTACCCTGAACAGTGCTGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039784.12 |
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| CDS GCA 72 bp | CGTCCGTGCACCACCACCACGTCGGAGGCCGAGGCCTaGGGGAACCTAGCGGAGCAGGGCGCAGCTTGCAGC | + |
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Preference number: 6 (lower is better) Translates to: RPCTTTTSEAEA*GNLAEQGAACS Trigger: GCTGCAAGCTGCGCCCTGCTCCGCTAGGTTCCCGCAGGCCTCGGCCTCCGACGTGGTGGTGGTGCACGGACG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000039784.12 ENSMUST00000175743.8 ENSMUST00000176351.8 ENSMUST00000176397.8 ENSMUST00000177463.8 |
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| CDS CAA 90 bp | ACCGCGGTCAACACGGCCGACAGAAGCTCGTCGGGGGTGGTGTTCTaGAAGCCTCCACGGCTGGCGCGGCCGATGGGGGTGCGCCGTCCG | + |
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Preference number: 6 (lower is better) Translates to: TAVNTADRSSSGVVF*KPPRLARPMGVRRP Trigger: CGGACGGCGCACCCCCATCGGCCGCGCCAGCCGTGGAGGCTTCAAGAACACCACCCCCGACGAGCTTCTGTCGGCCGTGTTGACCGCGGT 71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000039784.12 ENSMUST00000175743.8 ENSMUST00000176351.8 ENSMUST00000176397.8 ENSMUST00000177463.8 |
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| CDS TCA 72 bp | ACACGGCCGACAGAAGCTCGTCGGGGGTGGTGTTCTTaGAGCCTCCACGGCTGGCGCGGCCGATGGGGGTGC | + |
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Preference number: 6 (lower is better) Translates to: TRPTEARRGWCS*SLHGWRGRWGC Trigger: GCACCCCCATCGGCCGCGCCAGCCGTGGAGGCTTCAAGAACACCACCCCCGACGAGCTTCTGTCGGCCGTGT 69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000039784.12 ENSMUST00000175743.8 ENSMUST00000176351.8 ENSMUST00000176397.8 ENSMUST00000177463.8 |
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| CDS CAA 72 bp | AACACGGCCGACAGAAGCTCGTCGGGGGTGGTGTTCTaGAAGCCTCCACGGCTGGCGCGGCCGATGGGGGTG | + |
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Preference number: 6 (lower is better) Translates to: NTADRSSSGVVF*KPPRLARPMGV Trigger: CACCCCCATCGGCCGCGCCAGCCGTGGAGGCTTCAAGAACACCACCCCCGACGAGCTTCTGTCGGCCGTGTT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000039784.12 ENSMUST00000175743.8 ENSMUST00000176351.8 ENSMUST00000176397.8 ENSMUST00000177463.8 |
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| CDS GCA 72 bp | CCACGACGCTTCAGTTCATTGAGTAGCGTGACAACCTaGCTTGCTCCCGTGCAGCCCAGGGGGTGGCCCAGG | + |
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Preference number: 6 (lower is better) Translates to: PRRFSSLSSVTT*LAPVQPRGWPR Trigger: CCTGGGCCACCCCCTGGGCTGCACGGGAGCAAGGCAGGTTGTCACGCTACTCAATGAACTGAAGCGTCGTGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039784.12 ENSMUST00000176397.8 |
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| CDS TCA 72 bp | CTGGGATGCCGCTCAGAAATTGGGCGATGCGTGCCATaGCAGCCCCGGCTCCTGGCTCAAGAACATTGCCCA | + |
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Preference number: 6 (lower is better) Translates to: LGCRSEIGRCVP*QPRLLAQEHCP Trigger: TGGGCAATGTTCTTGAGCCAGGAGCCGGGGCTGTCATGGCACGCATCGCCCAATTTCTGAGCGGCATCCCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039784.12 ENSMUST00000175743.8 ENSMUST00000176397.8 ENSMUST00000177463.8 |
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| CDS CAA 72 bp | CGTGCCATGACAGCCCCGGCTCCTGGCTCAAGAACATaGCCCACGGAGATGTCTCCCAGCTGCTCAGGCTTT | + |
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Preference number: 6 (lower is better) Translates to: RAMTAPAPGSRT*PTEMSPSCSGF Trigger: AAAGCCTGAGCAGCTGGGAGACATCTCCGTGGGCAATGTTCTTGAGCCAGGAGCCGGGGCTGTCATGGCACG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039784.12 ENSMUST00000175743.8 ENSMUST00000176397.8 ENSMUST00000177463.8 |
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| CDS GCA 72 bp | GCTGCCTTCTGCTGGGAGGCCAGCGCAAAGTCATCCTaGTTCTGCCGTGAAATGCCAAACCGCTCAGCCACA | + |
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Preference number: 6 (lower is better) Translates to: AAFCWEASAKSS*FCREMPNRSAT Trigger: TGTGGCTGAGCGGTTTGGCATTTCACGGCAGAAGCAGGATGACTTTGCGCTGGCCTCCCAGCAGAAGGCAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039784.12 ENSMUST00000175743.8 ENSMUST00000176397.8 |
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| CDS GCA 72 bp | AATCTCAGCACGGAAGCATCCTCTGCTCTGGGCGCTTaGTGCCTTCTGCTGGGAGGCCAGCGCAAAGTCATC | + |
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Preference number: 6 (lower is better) Translates to: NLSTEASSALGA*CLLLGGQRKVI Trigger: GATGACTTTGCGCTGGCCTCCCAGCAGAAGGCAGCAAGCGCCCAGAGCAGAGGATGCTTCCGTGCTGAGATT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039784.12 ENSMUST00000175743.8 ENSMUST00000176397.8 |
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| CDS CAA 72 bp | CAATCTCAGCACGGAAGCATCCTCTGCTCTGGGCGCTaGCTGCCTTCTGCTGGGAGGCCAGCGCAAAGTCAT | + |
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Preference number: 6 (lower is better) Translates to: QSQHGSILCSGR*LPSAGRPAQSH Trigger: ATGACTTTGCGCTGGCCTCCCAGCAGAAGGCAGCAAGCGCCCAGAGCAGAGGATGCTTCCGTGCTGAGATTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039784.12 ENSMUST00000175743.8 ENSMUST00000176397.8 |
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| CDS CAA 90 bp | TCTATGTCATTCACAGTCAGCCCAGCCGTGGTAGAGCCTCCATCCTaGAAGGCAGGCTTCAGCTTGGCCAGGCCCTGCATGGTGGTGCTG | + |
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Preference number: 6 (lower is better) Translates to: SMSFTVSPAVVEPPS*KAGFSLARPCMVVL Trigger: CAGCACCACCATGCAGGGCCTGGCCAAGCTGAAGCCTGCCTTCAAGGATGGAGGCTCTACCACGGCTGGGCTGACTGTGAATGACATAGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176397.8 |
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| CDS TCA 72 bp | CTGGGAGGCCAGCGCAAAGTCATCCTGCTTCTGCCGTaGAATGCCAAACCGCTCAGCCACATTCTCCGAGGT | + |
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Preference number: 6 (lower is better) Translates to: LGGQRKVILLLP*NAKPLSHILRG Trigger: ACCTCGGAGAATGTGGCTGAGCGGTTTGGCATTTCACGGCAGAAGCAGGATGACTTTGCGCTGGCCTCCCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039784.12 ENSMUST00000175743.8 ENSMUST00000176397.8 ENSMUST00000176546.2 |
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| CDS GCA 72 bp | AGTCTCTGGGATGCCGCTCAGAAATTGGGCGATGCGTaGCATGACAGCCCCGGCTCCTGGCTCAAGAACATT | + |
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Preference number: 6 (lower is better) Translates to: SLWDAAQKLGDA*HDSPGSWLKNI Trigger: AATGTTCTTGAGCCAGGAGCCGGGGCTGTCATGGCACGCATCGCCCAATTTCTGAGCGGCATCCCAGAGACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039784.12 ENSMUST00000175743.8 ENSMUST00000176397.8 ENSMUST00000177463.8 |
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| CDS GCA 72 bp | CGCTTGTTCTGCTGGGAGGCCAGCGCAAAGTCATCCTaGTTCTGCCGTGAAATGCCAAACCGCTCAGCCACA | + |
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Preference number: 6 (lower is better) Translates to: RLFCWEASAKSS*FCREMPNRSAT Trigger: TGTGGCTGAGCGGTTTGGCATTTCACGGCAGAAGCAGGATGACTTTGCGCTGGCCTCCCAGCAGAACAAGCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176546.2 |
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| CDS GCA 72 bp | AGGCCAGCGCAAAGTCATCCTGCTTCTGCCGTGAAATaGCAAACCGCTCAGCCACATTCTCCGAGGTCATCC | + |
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Preference number: 6 (lower is better) Translates to: RPAQSHPASAVK*QTAQPHSPRSS Trigger: GGATGACCTCGGAGAATGTGGCTGAGCGGTTTGGCATTTCACGGCAGAAGCAGGATGACTTTGCGCTGGCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039784.12 ENSMUST00000175743.8 ENSMUST00000176397.8 ENSMUST00000176546.2 |
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| CDS GCA 72 bp | TTCTGCTGGGAGGCCAGCGCAAAGTCATCCTGCTTCTaGCGTGAAATGCCAAACCGCTCAGCCACATTCTCC | + |
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Preference number: 6 (lower is better) Translates to: FCWEASAKSSCF*REMPNRSATFS Trigger: GGAGAATGTGGCTGAGCGGTTTGGCATTTCACGGCAGAAGCAGGATGACTTTGCGCTGGCCTCCCAGCAGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039784.12 ENSMUST00000175743.8 ENSMUST00000176397.8 ENSMUST00000176546.2 |
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| CDS TCA 72 bp | CCCCACAGGCCATGCCAATGTCATAAGACCCATTTCTaGTGCCACCAGCAATGTTGGCCACTGCCTGCAGTC | + |
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Preference number: 6 (lower is better) Translates to: PHRPCQCHKTHF*CHQQCWPLPAV Trigger: GACTGCAGGCAGTGGCCAACATTGCTGGTGGCATCAGAAATGGGTCTTATGACATTGGCATGGCCTGTGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039784.12 ENSMUST00000175743.8 ENSMUST00000176546.2 ENSMUST00000177463.8 |
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| CDS TCA 72 bp | GCCACCAGCAATGTTGGCCACTGCCTGCAGTCCCGATaGACACTGTCTGTTGACCGTAGACAAAGGTACAGT | + |
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Preference number: 6 (lower is better) Translates to: ATSNVGHCLQSR*TLSVDRRQRYS Trigger: ACTGTACCTTTGTCTACGGTCAACAGACAGTGTTCATCGGGACTGCAGGCAGTGGCCAACATTGCTGGTGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000039784.12 ENSMUST00000175743.8 ENSMUST00000176397.8 ENSMUST00000176546.2 ENSMUST00000177463.8 |
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| CDS TCA 72 bp | TCCCACAGGCCATGCCAATGTCATAAGACCCATTTCTaGTGCCACCAGCAATGTTGGCCACTGCCTGCAGTC | + |
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Preference number: 6 (lower is better) Translates to: SHRPCQCHKTHF*CHQQCWPLPAV Trigger: GACTGCAGGCAGTGGCCAACATTGCTGGTGGCATCAGAAATGGGTCTTATGACATTGGCATGGCCTGTGGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176397.8 |
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| CDS CAA 72 bp | TGGTTTTCTTGTCACCCTTGTCATCCAGGACAGTGGTaGTCACAGGCACAATCTCAGCACGGAAGCATCCTC | + |
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Preference number: 6 (lower is better) Translates to: WFSCHPCHPGQW*SQAQSQHGSIL Trigger: GAGGATGCTTCCGTGCTGAGATTGTGCCTGTGACAACCACTGTCCTGGATGACAAGGGTGACAAGAAAACCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039784.12 ENSMUST00000175743.8 ENSMUST00000176397.8 |
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