Pregenerated sensors for ABT1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000036376Ensembl transcript IDs: ENSMUST00000041782.4
Found 121 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TCAGAAGGTGCTGAGGAAGGCAGTCCATGTGATAGACCCACGACATaGGCTGGACTGAGGGAGGAGAATGGAGACAGGAAAAGTGGCTGG | + |
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Preference number: 1 (lower is better) Translates to: SEGAEEGSPCDRPTT*AGLREENGDRKSGW Trigger: CCAGCCACTTTTCCTGTCTCCATTCTCCTCCCTCAGTCCAGCCCATGTCGTGGGTCTATCACATGGACTGCCTTCCTCAGCACCTTCTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041782.4 |
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| 3UTR CCA 90 bp | AGGCAGGCAATCAGAAATCAAACAAAACACAACAGGCACCTCCAGTaGTCTTCACCCTGGATAGGACGAGTAAGGTTCTCAGGCTGGCAC | + |
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Preference number: 1 (lower is better) Translates to: RQAIRNQTKHNRHLQ*SSPWIGRVRFSGWH Trigger: GTGCCAGCCTGAGAACCTTACTCGTCCTATCCAGGGTGAAGACCACTGGAGGTGCCTGTTGTGTTTTGTTTGATTTCTGATTGCCTGCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041782.4 |
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| 3UTR CCA 90 bp | GACTACTTCCTCCGTAGAAAGGAGATCTCTGAGTTCAAGGTCATGTaGGACAAAGCAAGTCCCAGATCCAGGAATGGCGGCACACACCTT | + |
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Preference number: 1 (lower is better) Translates to: DYFLRRKEISEFKVM*DKASPRSRNGGTHL Trigger: AAGGTGTGTGCCGCCATTCCTGGATCTGGGACTTGCTTTGTCCCACATGACCTTGAACTCAGAGATCTCCTTTCTACGGAGGAAGTAGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041782.4 |
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| 3UTR CCA 90 bp | GCACTTGAGGTGCTGGTAGCAGATAGAGATGCTGTTTGGAGCCTCTaGCAGGCCCCTGTAGGGAAATCACAGAAAAGACCTTTGGGATAT | + |
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Preference number: 1 (lower is better) Translates to: ALEVLVADRDAVWSL*QAPVGKSQKRPLGY Trigger: ATATCCCAAAGGTCTTTTCTGTGATTTCCCTACAGGGGCCTGCCAGAGGCTCCAAACAGCATCTCTATCTGCTACCAGCACCTCAAGTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041782.4 |
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| 3UTR CCA 90 bp | AAACATCTGCCTAGATGGTCACACTCTTCAGGAAGCAGATCAGAATaGCGCAGGGCTGGTAGGTATTTCTTCCATCACCAGGAGTCCCTT | + |
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Preference number: 1 (lower is better) Translates to: KHLPRWSHSSGSRSE*RRAGRYFFHHQESL Trigger: AAGGGACTCCTGGTGATGGAAGAAATACCTACCAGCCCTGCGCCATTCTGATCTGCTTCCTGAAGAGTGTGACCATCTAGGCAGATGTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041782.4 |
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| 3UTR CCA 90 bp | ACATGGGCTGGACTGAGGGAGGAGAATGGAGACAGGAAAAGTGGCTaGAATGGTAGGATCTTTGAGAGGCTCAGTCTCTGTCTTAGAGTT | + |
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Preference number: 1 (lower is better) Translates to: TWAGLREENGDRKSG*NGRIFERLSLCLRV Trigger: AACTCTAAGACAGAGACTGAGCCTCTCAAAGATCCTACCATTCCAGCCACTTTTCCTGTCTCCATTCTCCTCCCTCAGTCCAGCCCATGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041782.4 |
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| 3UTR CCA 90 bp | CAAAGCAAGTCCCAGATCCAGGAATGGCGGCACACACCTTTAACCTaGGCCACATCTTCTAAGGAGACCTACATAATGACATTGGAAGAA | + |
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Preference number: 1 (lower is better) Translates to: QSKSQIQEWRHTPLT*ATSSKETYIMTLEE Trigger: TTCTTCCAATGTCATTATGTAGGTCTCCTTAGAAGATGTGGCCCAGGTTAAAGGTGTGTGCCGCCATTCCTGGATCTGGGACTTGCTTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041782.4 |
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| 3UTR TCA 90 bp | GGAGGGCAAGTCCACTCTTTCAGTCAGAAACTGTTAGCTGTCCACTaGGAAAGAGGCAGGCAATCAGAAATCAAACAAAACACAACAGGC | + |
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Preference number: 1 (lower is better) Translates to: GGQVHSFSQKLLAVH*ERGRQSEIKQNTTG Trigger: GCCTGTTGTGTTTTGTTTGATTTCTGATTGCCTGCCTCTTTCTCAGTGGACAGCTAACAGTTTCTGACTGAAAGAGTGGACTTGCCCTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041782.4 |
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| 3UTR TCA 90 bp | CCAGATCTGCCAATAGCAGAAACTAACACTGAGCCCCAGATTCTTTaGGGTGATCAGCCAGAAACCTGGTGTCAGGTTTACTACATTGGA | + |
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Preference number: 1 (lower is better) Translates to: PDLPIAETNTEPQIL*GDQPETWCQVYYIG Trigger: TCCAATGTAGTAAACCTGACACCAGGTTTCTGGCTGATCACCTCAAAGAATCTGGGGCTCAGTGTTAGTTTCTGCTATTGGCAGATCTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041782.4 |
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| 3UTR TCA 90 bp | AGCTGCAGTATAATCCCTTTCCAGGGCAACCCTGAAAGATACAGGTaGAGGAAAATCTTCACAATGGGCAAAACTTCGGGCAGTACACGT | + |
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Preference number: 1 (lower is better) Translates to: SCSIIPFQGNPERYR*RKIFTMGKTSGSTR Trigger: ACGTGTACTGCCCGAAGTTTTGCCCATTGTGAAGATTTTCCTTCACCTGTATCTTTCAGGGTTGCCCTGGAAAGGGATTATACTGCAGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041782.4 |
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| 3UTR TCA 90 bp | CCCAGAAGTGGACAGCTGCAGTATAATCCCTTTCCAGGGCAACCCTaGAAGATACAGGTGAAGGAAAATCTTCACAATGGGCAAAACTTC | + |
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Preference number: 1 (lower is better) Translates to: PRSGQLQYNPFPGQP*KIQVKENLHNGQNF Trigger: GAAGTTTTGCCCATTGTGAAGATTTTCCTTCACCTGTATCTTTCAGGGTTGCCCTGGAAAGGGATTATACTGCAGCTGTCCACTTCTGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041782.4 |
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| 3UTR GCA 90 bp | AAAGGCCTTTACCAGACTCTTGGTGTGTGGAATAGAGAAAACATCTaGCTAGATGGTCACACTCTTCAGGAAGCAGATCAGAATGGCGCA | + |
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Preference number: 1 (lower is better) Translates to: KGLYQTLGVWNRENI*LDGHTLQEADQNGA Trigger: TGCGCCATTCTGATCTGCTTCCTGAAGAGTGTGACCATCTAGGCAGATGTTTTCTCTATTCCACACACCAAGAGTCTGGTAAAGGCCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041782.4 |
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| 3UTR TCA 90 bp | CCTAGGTCCAGTAATGTGGGACATGCAGAGATATTCCTTCTAAGGTaGAAGATAAGTTATTGCACCTGGCCCCTCCCACTACCAAGAAAA | + |
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Preference number: 1 (lower is better) Translates to: PRSSNVGHAEIFLLR*KISYCTWPLPLPRK Trigger: TTTTCTTGGTAGTGGGAGGGGCCAGGTGCAATAACTTATCTTTCACCTTAGAAGGAATATCTCTGCATGTCCCACATTACTGGACCTAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041782.4 |
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| 3UTR CCA 90 bp | TCCAGGGCAACCCTGAAAGATACAGGTGAAGGAAAATCTTCACAATaGGCAAAACTTCGGGCAGTACACGTGGTATTAGTTTGTTTGGCA | + |
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Preference number: 1 (lower is better) Translates to: SRATLKDTGEGKSSQ*AKLRAVHVVLVCLA Trigger: TGCCAAACAAACTAATACCACGTGTACTGCCCGAAGTTTTGCCCATTGTGAAGATTTTCCTTCACCTGTATCTTTCAGGGTTGCCCTGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041782.4 |
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| 3UTR CCA 90 bp | GTTTGGCAAAAGAAATGGCCAGATGTACAACTGTTTACTGACTCATaGTTTGTAGCCAATGGATTGGCTGGATGGTCAGGGATTTGGAAA | + |
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Preference number: 1 (lower is better) Translates to: VWQKKWPDVQLFTDS*FVANGLAGWSGIWK Trigger: TTTCCAAATCCCTGACCATCCAGCCAATCCATTGGCTACAAACCATGAGTCAGTAAACAGTTGTACATCTGGCCATTTCTTTTGCCAAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041782.4 |
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| 3UTR CCA 90 bp | TCCAGTCGTAAAGTAGGACATACAAAGCAGCAGTCTATTATCAAATaGAAGTGGTATATATGTGATTGGGCCAGAGCAGGTCTTGAAGGC | + |
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Preference number: 1 (lower is better) Translates to: SSRKVGHTKQQSIIK*KWYICDWARAGLEG Trigger: GCCTTCAAGACCTGCTCTGGCCCAATCACATATATACCACTTCCATTTGATAATAGACTGCTGCTTTGTATGTCCTACTTTACGACTGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041782.4 |
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| 3UTR CAA 90 bp | CTTGAGCTTGTGAGGAAGGGAACAAGGGGCCAGGGGTTCAGGCTGTaGGAAGCGAAGTTTCAGAAGGTGCTGAGGAAGGCAGTCCATGTG | + |
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Preference number: 2 (lower is better) Translates to: LELVRKGTRGQGFRL*EAKFQKVLRKAVHV Trigger: CACATGGACTGCCTTCCTCAGCACCTTCTGAAACTTCGCTTCCAACAGCCTGAACCCCTGGCCCCTTGTTCCCTTCCTCACAAGCTCAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041782.4 |
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| 3UTR-3UTR CCA 90 bp | GAAGGCCCTTCAACAGGTCCAGGCTACTGTGCAGGCTGCTCTACTCCTGAACCAAACAGGCACCTCCAGTaGTCTTCACCCTGGATAGGA | + |
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Preference number: 2 (lower is better) Translates to: EGPSTGPGYCAGCSTPEPNRHLQ*SSPWIG Trigger: TCCTATCCAGGGTGAAGACCACTGGAGGTGCCTGTT...TGGTTCAGGAGTAGAGCAGCCTGCACAGTAGCCTGGACCTGTTGAAGGGCCTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041782.4 |
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| 3UTR CAA 90 bp | CCCGTTCTGTGGACAGTCAGCCTCTTTCCCCAGCCATCCCTGTCATaGCTCAATGGGCACATGAACAAAGTGGCTATGGTGACGGAGATG | + |
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Preference number: 2 (lower is better) Translates to: PVLWTVSLFPQPSLS*LNGHMNKVAMVTEM Trigger: CATCTCCGTCACCATAGCCACTTTGTTCATGTGCCCATTGAGCAATGACAGGGATGGCTGGGGAAAGAGGCTGACTGTCCACAGAACGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041782.4 |
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| 3UTR-3UTR CCA 90 bp | GAAGGCCCTTCAACAGGTCCAGGCTACTGTGCAGGCTGCTCTACTCCTGAACCAGCTCCTGACCACTGTTaGGAGTTAAGACTACAGTCG | + |
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Preference number: 2 (lower is better) Translates to: EGPSTGPGYCAGCSTPEPAPDHC*ELRLQS Trigger: CGACTGTAGTCTTAACTCCCAACAGTGGTCAGGAGC...TGGTTCAGGAGTAGAGCAGCCTGCACAGTAGCCTGGACCTGTTGAAGGGCCTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041782.4 |
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| 3UTR-3UTR TCA 90 bp | CATTATCATCAAGGTGGGAGCCTGGCAGCATCCAGGCATGATACAGGCAGAGCTACAAAGTGGCTATGGTaGCGGAGATGGAGGTTATGC | + |
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Preference number: 2 (lower is better) Translates to: HYHQGGSLAASRHDTGRATKWLW*RRWRLC Trigger: GCATAACCTCCATCTCCGTCACCATAGCCACTTTGT...AGCTCTGCCTGTATCATGCCTGGATGCTGCCAGGCTCCCACCTTGATGATAATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041782.4 |
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| 3UTR-3UTR GCA 90 bp | GAAGGCCCTTCAACAGGTCCAGGCTACTGTGCAGGCTGCTCTACTCCTGAACCAAGCTCTACCATCATCTaGAGACAACTATTCTCCCTT | + |
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Preference number: 2 (lower is better) Translates to: EGPSTGPGYCAGCSTPEPSSTII*RQLFSL Trigger: AAGGGAGAATAGTTGTCTGCAGATGATGGTAGAGCT...TGGTTCAGGAGTAGAGCAGCCTGCACAGTAGCCTGGACCTGTTGAAGGGCCTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041782.4 |
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| 3UTR-3UTR CCA 90 bp | GAAGGCCCTTCAACAGGTCCAGGCTACTGTGCAGGCTGCTCTACTCCTGAACCACAGACTCTTGGTGTGTaGAATAGAGAAAACATCTGC | + |
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Preference number: 2 (lower is better) Translates to: EGPSTGPGYCAGCSTPEPQTLGV*NRENIC Trigger: GCAGATGTTTTCTCTATTCCACACACCAAGAGTCTG...TGGTTCAGGAGTAGAGCAGCCTGCACAGTAGCCTGGACCTGTTGAAGGGCCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041782.4 |
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| 3UTR-3UTR CCA 90 bp | ATGCTCGGGCTCAACAACAGGGACTTCCACTCACCAAGGCTGACCTGGCTACGGTCAGGTTTACTACATTaGACTACTTCCTCCGTAGAA | + |
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Preference number: 2 (lower is better) Translates to: MLGLNNRDFHSPRLTWLRSGLLH*TTSSVE Trigger: TTCTACGGAGGAAGTAGTCCAATGTAGTAAACCTGA...CCGTAGCCAGGTCAGCCTTGGTGAGTGGAAGTCCCTGTTGTTGAGCCCGAGCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041782.4 |
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| 3UTR-3UTR GCA 90 bp | CTTGATACAGGCCTCTCCTCACAGCAAGTTTTTGGGAGGCTGAGACAGGATTTCCAACTGCTAGACCCTTaGACTTCCATTCACAGGTGC | + |
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Preference number: 2 (lower is better) Translates to: LDTGLSSQQVFGRLRQDFQLLDP*TSIHRC Trigger: GCACCTGTGAATGGAAGTGCAAGGGTCTAGCAGTTG...GAAATCCTGTCTCAGCCTCCCAAAAACTTGCTGTGAGGAGAGGCCTGTATCAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041782.4 |
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| 3UTR-3UTR CCA 90 bp | CATTATCATCAAGGTGGGAGCCTGGCAGCATCCAGGCATGATACAGGCAGAGCTGTAAGGTTCTCAGGCTaGCACTTACAGGATTTGTTC | + |
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Preference number: 2 (lower is better) Translates to: HYHQGGSLAASRHDTGRAVRFSG*HLQDLF Trigger: GAACAAATCCTGTAAGTGCCAGCCTGAGAACCTTAC...AGCTCTGCCTGTATCATGCCTGGATGCTGCCAGGCTCCCACCTTGATGATAATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041782.4 |
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| 3UTR-3UTR CCA 90 bp | CTTGATACAGGCCTCTCCTCACAGCAAGTTTTTGGGAGGCTGAGACAGGATTTCGAGTTCAAGGTCATGTaGGACAAAGCAAGTCCCAGA | + |
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Preference number: 2 (lower is better) Translates to: LDTGLSSQQVFGRLRQDFEFKVM*DKASPR Trigger: TCTGGGACTTGCTTTGTCCCACATGACCTTGAACTC...GAAATCCTGTCTCAGCCTCCCAAAAACTTGCTGTGAGGAGAGGCCTGTATCAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041782.4 |
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| 3UTR-3UTR CCA 90 bp | TCTGACTTTTATTACCTTTGTGACTGTTTGGATCAAGACCTTCCTGACGCTCCTACCCACGACATGGGCTaGACTGAGGGAGGAGAATGG | + |
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Preference number: 2 (lower is better) Translates to: SDFYYLCDCLDQDLPDAPTHDMG*TEGGEW Trigger: CCATTCTCCTCCCTCAGTCCAGCCCATGTCGTGGGT...AGGAGCGTCAGGAAGGTCTTGATCCAAACAGTCACAAAGGTAATAAAAGTCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041782.4 |
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| 3UTR CAA 90 bp | ACCTACATAATGACATTGGAAGAAGGAAGACCCTCCTTCACCTGCTaGTCTTGTGGGACTGAGCAACTGCTAGACCCTTGCACTTCCATT | + |
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Preference number: 2 (lower is better) Translates to: TYIMTLEEGRPSFTC*SCGTEQLLDPCTSI Trigger: AATGGAAGTGCAAGGGTCTAGCAGTTGCTCAGTCCCACAAGACAAGCAGGTGAAGGAGGGTCTTCCTTCTTCCAATGTCATTATGTAGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041782.4 |
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| 3UTR-3UTR TCA 90 bp | CATTATCATCAAGGTGGGAGCCTGGCAGCATCCAGGCATGATACAGGCAGAGCTCCTGAAAGATACAGGTaGAGGAAAATCTTCACAATG | + |
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Preference number: 2 (lower is better) Translates to: HYHQGGSLAASRHDTGRAPERYR*RKIFTM Trigger: CATTGTGAAGATTTTCCTTCACCTGTATCTTTCAGG...AGCTCTGCCTGTATCATGCCTGGATGCTGCCAGGCTCCCACCTTGATGATAATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041782.4 |
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| 3UTR-3UTR CCA 90 bp | GAAGGCCCTTCAACAGGTCCAGGCTACTGTGCAGGCTGCTCTACTCCTGAACCAATAGATATTTCCAAGTaGGCAAAGGATGTGAAGATA | + |
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Preference number: 2 (lower is better) Translates to: EGPSTGPGYCAGCSTPEPIDISK*AKDVKI Trigger: TATCTTCACATCCTTTGCCCACTTGGAAATATCTAT...TGGTTCAGGAGTAGAGCAGCCTGCACAGTAGCCTGGACCTGTTGAAGGGCCTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041782.4 |
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| 3UTR-3UTR CCA 90 bp | GAAGGCCCTTCAACAGGTCCAGGCTACTGTGCAGGCTGCTCTACTCCTGAACCATTGCTCAAATGCCTATaGTTTCTACTCCTATTACAA | + |
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Preference number: 2 (lower is better) Translates to: EGPSTGPGYCAGCSTPEPLLKCL*FLLLLQ Trigger: TTGTAATAGGAGTAGAAACCATAGGCATTTGAGCAA...TGGTTCAGGAGTAGAGCAGCCTGCACAGTAGCCTGGACCTGTTGAAGGGCCTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041782.4 |
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| 3UTR-3UTR CCA 90 bp | GAAGGCCCTTCAACAGGTCCAGGCTACTGTGCAGGCTGCTCTACTCCTGAACCAATTATCAAATGGAAGTaGTATATATGTGATTGGGCC | + |
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Preference number: 2 (lower is better) Translates to: EGPSTGPGYCAGCSTPEPIIKWK*YICDWA Trigger: GGCCCAATCACATATATACCACTTCCATTTGATAAT...TGGTTCAGGAGTAGAGCAGCCTGCACAGTAGCCTGGACCTGTTGAAGGGCCTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041782.4 |
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| 3UTR-3UTR TCA 90 bp | TCTGACTTTTATTACCTTTGTGACTGTTTGGATCAAGACCTTCCTGACGCTCCTAGCCTTCCACCACAGTaGACAAACACCACAGACCAC | + |
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Preference number: 2 (lower is better) Translates to: SDFYYLCDCLDQDLPDAPSLPPQ*TNTTDH Trigger: GTGGTCTGTGGTGTTTGTTCACTGTGGTGGAAGGCT...AGGAGCGTCAGGAAGGTCTTGATCCAAACAGTCACAAAGGTAATAAAAGTCAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041782.4 |
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| 3UTR-3UTR TCA 90 bp | TCTGACTTTTATTACCTTTGTGACTGTTTGGATCAAGACCTTCCTGACGCTCCTGAGCCCCAGATTCTTTaGGGTGATCAGCCAGAAACC | + |
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Preference number: 2 (lower is better) Translates to: SDFYYLCDCLDQDLPDAPEPQIL*GDQPET Trigger: GGTTTCTGGCTGATCACCTCAAAGAATCTGGGGCTC...AGGAGCGTCAGGAAGGTCTTGATCCAAACAGTCACAAAGGTAATAAAAGTCAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041782.4 |
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| 3UTR-3UTR GCA 90 bp | CATTATCATCAAGGTGGGAGCCTGGCAGCATCCAGGCATGATACAGGCAGAGCTAAGAAGTTGCTCAAATaGCTATGGTTTCTACTCCTA | + |
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Preference number: 2 (lower is better) Translates to: HYHQGGSLAASRHDTGRAKKLLK*LWFLLL Trigger: TAGGAGTAGAAACCATAGGCATTTGAGCAACTTCTT...AGCTCTGCCTGTATCATGCCTGGATGCTGCCAGGCTCCCACCTTGATGATAATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041782.4 |
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| 3UTR-3UTR CCA 90 bp | CTTGATACAGGCCTCTCCTCACAGCAAGTTTTTGGGAGGCTGAGACAGGATTTCAATGGATTGGCTGGATaGTCAGGGATTTGGAAAGAT | + |
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Preference number: 2 (lower is better) Translates to: LDTGLSSQQVFGRLRQDFNGLAG*SGIWKD Trigger: ATCTTTCCAAATCCCTGACCATCCAGCCAATCCATT...GAAATCCTGTCTCAGCCTCCCAAAAACTTGCTGTGAGGAGAGGCCTGTATCAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041782.4 |
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| 3UTR CAA 90 bp | TTCTTTGAGGTGATCAGCCAGAAACCTGGTGTCAGGTTTACTACATaGGACTACTTCCTCCGTAGAAAGGAGATCTCTGAGTTCAAGGTC | + |
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Preference number: 2 (lower is better) Translates to: FFEVISQKPGVRFTT*DYFLRRKEISEFKV Trigger: GACCTTGAACTCAGAGATCTCCTTTCTACGGAGGAAGTAGTCCAATGTAGTAAACCTGACACCAGGTTTCTGGCTGATCACCTCAAAGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041782.4 |
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| 3UTR CAA 90 bp | GGGCCAGAGCAGGTCTTGAAGGCACAAGCAAGTTACTTGAAGAAGTaGCTCAAATGCCTATGGTTTCTACTCCTATTACAATGCCATCTG | + |
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Preference number: 2 (lower is better) Translates to: GPEQVLKAQASYLKK*LKCLWFLLLLQCHL Trigger: CAGATGGCATTGTAATAGGAGTAGAAACCATAGGCATTTGAGCAACTTCTTCAAGTAACTTGCTTGTGCCTTCAAGACCTGCTCTGGCCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041782.4 |
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| 3UTR-3UTR CCA 90 bp | CTTGATACAGGCCTCTCCTCACAGCAAGTTTTTGGGAGGCTGAGACAGGATTTCTGGGGAAGAAGTATGTaGATAGATATTTCCAAGTGG | + |
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Preference number: 2 (lower is better) Translates to: LDTGLSSQQVFGRLRQDFWGRSM*IDISKW Trigger: CCACTTGGAAATATCTATCCACATACTTCTTCCCCA...GAAATCCTGTCTCAGCCTCCCAAAAACTTGCTGTGAGGAGAGGCCTGTATCAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041782.4 |
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| 3UTR-3UTR CCA 90 bp | TTGAAACTAGGCCTCTTGATACAGGCCTCTCCTCACAGCAAGTTTTTGGGAGGCCTGTTTACTGACTCATaGTTTGTAGCCAATGGATTG | + |
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Preference number: 2 (lower is better) Translates to: LKLGLLIQASPHSKFLGGLFTDS*FVANGL Trigger: CAATCCATTGGCTACAAACCATGAGTCAGTAAACAG...GCCTCCCAAAAACTTGCTGTGAGGAGAGGCCTGTATCAAGAGGCCTAGTTTCAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041782.4 |
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| 3UTR-3UTR CCA 90 bp | CTGTTGGAAGCGAAGTTTCAGAAGGTGCTGAGGAAGGCAGTCCATGTGATAGACCTGAAGACTAGGACCTaGATTTCTGATAGCTCTATA | + |
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Preference number: 2 (lower is better) Translates to: LLEAKFQKVLRKAVHVIDLKTRT*ISDSSI Trigger: TATAGAGCTATCAGAAATCCAGGTCCTAGTCTTCAG...GTCTATCACATGGACTGCCTTCCTCAGCACCTTCTGAAACTTCGCTTCCAACAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041782.4 |
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| 3UTR CAA 90 bp | AAACAGCTCTTGGCCTGCTATTGGGCCTTAGTGGAAACTGAACATTaGATAATAGGACACCAGAATCAGGTTGCAAGTTACCAAGCAACC | + |
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Preference number: 2 (lower is better) Translates to: KQLLACYWALVETEH*IIGHQNQVASYQAT Trigger: GGTTGCTTGGTAACTTGCAACCTGATTCTGGTGTCCTATTATCAAATGTTCAGTTTCCACTAAGGCCCAATAGCAGGCCAAGAGCTGTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041782.4 |
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| 3UTR-3UTR GCA 90 bp | AGTACACGTGGTATTAGTTTGTTTGGCAAAAGAAATGGCCAGATGTACAACTGTAGACCCTCCTTCACCTaGTTGTCTTGTGGGACTGAG | + |
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Preference number: 2 (lower is better) Translates to: STRGISLFGKRNGQMYNCRPSFT*LSCGTE Trigger: CTCAGTCCCACAAGACAAGCAGGTGAAGGAGGGTCT...ACAGTTGTACATCTGGCCATTTCTTTTGCCAAACAAACTAATACCACGTGTACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041782.4 |
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| 3UTR-3UTR CCA 90 bp | AGTACACGTGGTATTAGTTTGTTTGGCAAAAGAAATGGCCAGATGTACAACTGTTCCCAGATCCAGGAATaGCGGCACACACCTTTAACC | + |
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Preference number: 2 (lower is better) Translates to: STRGISLFGKRNGQMYNCSQIQE*RHTPLT Trigger: GGTTAAAGGTGTGTGCCGCCATTCCTGGATCTGGGA...ACAGTTGTACATCTGGCCATTTCTTTTGCCAAACAAACTAATACCACGTGTACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041782.4 |
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| 3UTR-3UTR CCA 90 bp | CTGTTGGAAGCGAAGTTTCAGAAGGTGCTGAGGAAGGCAGTCCATGTGATAGACGTTTGGCAAAAGAAATaGCCAGATGTACAACTGTTT | + |
|
Preference number: 2 (lower is better) Translates to: LLEAKFQKVLRKAVHVIDVWQKK*PDVQLF Trigger: AAACAGTTGTACATCTGGCCATTTCTTTTGCCAAAC...GTCTATCACATGGACTGCCTTCCTCAGCACCTTCTGAAACTTCGCTTCCAACAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041782.4 |
||
| 3UTR-3UTR CCA 90 bp | TCTGACTTTTATTACCTTTGTGACTGTTTGGATCAAGACCTTCCTGACGCTCCTGACAGGAAAAGTGGCTaGAATGGTAGGATCTTTGAG | + |
|
Preference number: 2 (lower is better) Translates to: SDFYYLCDCLDQDLPDAPDRKSG*NGRIFE Trigger: CTCAAAGATCCTACCATTCCAGCCACTTTTCCTGTC...AGGAGCGTCAGGAAGGTCTTGATCCAAACAGTCACAAAGGTAATAAAAGTCAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041782.4 |
||
| 3UTR-3UTR GCA 90 bp | TCTGACTTTTATTACCTTTGTGACTGTTTGGATCAAGACCTTCCTGACGCTCCTGTGATAGCTTGTGGATaGCTTTTCCAGGTAAGGATT | + |
|
Preference number: 2 (lower is better) Translates to: SDFYYLCDCLDQDLPDAPVIACG*LFQVRI Trigger: AATCCTTACCTGGAAAAGGCATCCACAAGCTATCAC...AGGAGCGTCAGGAAGGTCTTGATCCAAACAGTCACAAAGGTAATAAAAGTCAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041782.4 |
||
| 3UTR-3UTR TCA 90 bp | AGTCTATTATCAAATGGAAGTGGTATATATGTGATTGGGCCAGAGCAGGTCTTGCACAAGCAAGTTACTTaGAGAAGTTGCTCAAATGCC | + |
|
Preference number: 2 (lower is better) Translates to: SLLSNGSGIYVIGPEQVLHKQVT*RSCSNA Trigger: GGCATTTGAGCAACTTCTTCAAGTAACTTGCTTGTG...CAAGACCTGCTCTGGCCCAATCACATATATACCACTTCCATTTGATAATAGACT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041782.4 |
||
| 3UTR-3UTR CCA 90 bp | TCTGACTTTTATTACCTTTGTGACTGTTTGGATCAAGACCTTCCTGACGCTCCTACTGAGCGGCATGTATaGCTTCAAAAGAAGTTGAAA | + |
|
Preference number: 2 (lower is better) Translates to: SDFYYLCDCLDQDLPDAPTERHV*LQKKLK Trigger: TTTCAACTTCTTTTGAAGCCATACATGCCGCTCAGT...AGGAGCGTCAGGAAGGTCTTGATCCAAACAGTCACAAAGGTAATAAAAGTCAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041782.4 |
||
| 3UTR-3UTR GCA 90 bp | TTAAAAGATAAGGCATGTGATAGCTTGTGGATGCCTTTTCCAGGTAAGGATTTACTACTCCTATTACAATaGCATCTGCTGCCAAGCATG | + |
|
Preference number: 2 (lower is better) Translates to: LKDKACDSLWMPFPGKDLLLLLQ*HLLPSM Trigger: CATGCTTGGCAGCAGATGGCATTGTAATAGGAGTAG...TAAATCCTTACCTGGAAAAGGCATCCACAAGCTATCACATGCCTTATCTTTTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041782.4 |
||
| 3UTR-3UTR TCA 90 bp | TTAAAAGATAAGGCATGTGATAGCTTGTGGATGCCTTTTCCAGGTAAGGATTTAACAATTGAAAATTGGTaGGAAAGACATCTGGGGAAG | + |
|
Preference number: 2 (lower is better) Translates to: LKDKACDSLWMPFPGKDLTIENW*ERHLGK Trigger: CTTCCCCAGATGTCTTTCTCACCAATTTTCAATTGT...TAAATCCTTACCTGGAAAAGGCATCCACAAGCTATCACATGCCTTATCTTTTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000041782.4 |
||
| 3UTR-3UTR GCA 90 bp | TTAAAAGATAAGGCATGTGATAGCTTGTGGATGCCTTTTCCAGGTAAGGATTTAAATAGAGAAAACATCTaGCTAGATGGTCACACTCTT | + |
|
Preference number: 2 (lower is better) Translates to: LKDKACDSLWMPFPGKDLNRENI*LDGHTL Trigger: AAGAGTGTGACCATCTAGGCAGATGTTTTCTCTATT...TAAATCCTTACCTGGAAAAGGCATCCACAAGCTATCACATGCCTTATCTTTTAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000041782.4 |
||
| 3UTR-3UTR CCA 90 bp | TTAAAAGATAAGGCATGTGATAGCTTGTGGATGCCTTTTCCAGGTAAGGATTTAGGTCTATTTGGATTCTaGAGACAGTATATTACTCAC | + |
|
Preference number: 2 (lower is better) Translates to: LKDKACDSLWMPFPGKDLGLFGF*RQYITH Trigger: GTGAGTAATATACTGTCTCCAGAATCCAAATAGACC...TAAATCCTTACCTGGAAAAGGCATCCACAAGCTATCACATGCCTTATCTTTTAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041782.4 |
||
| 3UTR CCA 72 bp | CTCAACAACAGGGACTTCCACTCACCAAGGCTGACCTaGCTACGGCTGCCGCTGAATGCCAGATCTGCCAAT | + |
|
Preference number: 3 (lower is better) Translates to: LNNRDFHSPRLT*LRLPLNARSAN Trigger: ATTGGCAGATCTGGCATTCAGCGGCAGCCGTAGCCAGGTCAGCCTTGGTGAGTGGAAGTCCCTGTTGTTGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041782.4 |
||
| 3UTR TCA 72 bp | ACTCAGGCCCATATACCAAGTGACGTGTGTGGGGCCTaGAACAGAAGGCCCTTCAACAGGTCCAGGCTACTG | + |
|
Preference number: 3 (lower is better) Translates to: TQAHIPSDVCGA*NRRPFNRSRLL Trigger: CAGTAGCCTGGACCTGTTGAAGGGCCTTCTGTTTCAGGCCCCACACACGTCACTTGGTATATGGGCCTGAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041782.4 |
||
| 3UTR GCA 72 bp | GAAGGCCCTTCAACAGGTCCAGGCTACTGTGCAGGCTaGTCTACTCCTGAACCATATGATCAAGCAGACCCG | + |
|
Preference number: 3 (lower is better) Translates to: EGPSTGPGYCAG*STPEPYDQADP Trigger: CGGGTCTGCTTGATCATATGGTTCAGGAGTAGAGCAGCCTGCACAGTAGCCTGGACCTGTTGAAGGGCCTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041782.4 |
||
| 3UTR CCA 72 bp | GCACTTGAGGTGCTGGTAGCAGATAGAGATGCTGTTTaGAGCCTCTGGCAGGCCCCTGTAGGGAAATCACAG | + |
|
Preference number: 3 (lower is better) Translates to: ALEVLVADRDAV*SLWQAPVGKSQ Trigger: CTGTGATTTCCCTACAGGGGCCTGCCAGAGGCTCCAAACAGCATCTCTATCTGCTACCAGCACCTCAAGTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041782.4 |
||
| 3UTR-3UTR CAA 90 bp | CATTATCATCAAGGTGGGAGCCTGGCAGCATCCAGGCATGATACAGGCAGAGCTCCCTCCTTCACCTGCTaGTCTTGTGGGACTGAGCAA | + |
|
Preference number: 3 (lower is better) Translates to: HYHQGGSLAASRHDTGRAPSFTC*SCGTEQ Trigger: TTGCTCAGTCCCACAAGACAAGCAGGTGAAGGAGGG...AGCTCTGCCTGTATCATGCCTGGATGCTGCCAGGCTCCCACCTTGATGATAATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041782.4 |
||
| 3UTR CCA 72 bp | GGTCATGTGGGACAAAGCAAGTCCCAGATCCAGGAATaGCGGCACACACCTTTAACCTGGGCCACATCTTCT | + |
|
Preference number: 3 (lower is better) Translates to: GHVGQSKSQIQE*RHTPLTWATSS Trigger: AGAAGATGTGGCCCAGGTTAAAGGTGTGTGCCGCCATTCCTGGATCTGGGACTTGCTTTGTCCCACATGACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041782.4 |
||
| 3UTR CCA 72 bp | TCAGAGGTTCAGTCCATTATCATCAAGGTGGGAGCCTaGCAGCATCCAGGCATGATACAGGCAGAGCTGAGG | + |
|
Preference number: 3 (lower is better) Translates to: SEVQSIIIKVGA*QHPGMIQAELR Trigger: CCTCAGCTCTGCCTGTATCATGCCTGGATGCTGCCAGGCTCCCACCTTGATGATAATGGACTGAACCTCTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041782.4 |
||
| 3UTR CCA 72 bp | CTCCGTAGAAAGGAGATCTCTGAGTTCAAGGTCATGTaGGACAAAGCAAGTCCCAGATCCAGGAATGGCGGC | + |
|
Preference number: 3 (lower is better) Translates to: LRRKEISEFKVM*DKASPRSRNGG Trigger: GCCGCCATTCCTGGATCTGGGACTTGCTTTGTCCCACATGACCTTGAACTCAGAGATCTCCTTTCTACGGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041782.4 |
||
| 3UTR GCA 72 bp | TATACGTTATGCAGGCACCACCCAGAAGTGGACAGCTaGAGTATAATCCCTTTCCAGGGCAACCCTGAAAGA | + |
|
Preference number: 3 (lower is better) Translates to: YTLCRHHPEVDS*SIIPFQGNPER Trigger: TCTTTCAGGGTTGCCCTGGAAAGGGATTATACTGCAGCTGTCCACTTCTGGGTGGTGCCTGCATAACGTATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041782.4 |
||
| 3UTR CCA 72 bp | TCCCAGATCCAGGAATGGCGGCACACACCTTTAACCTaGGCCACATCTTCTAAGGAGACCTACATAATGACA | + |
|
Preference number: 3 (lower is better) Translates to: SQIQEWRHTPLT*ATSSKETYIMT Trigger: TGTCATTATGTAGGTCTCCTTAGAAGATGTGGCCCAGGTTAAAGGTGTGTGCCGCCATTCCTGGATCTGGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041782.4 |
||
| 3UTR-3UTR CAA 90 bp | TTGAAACTAGGCCTCTTGATACAGGCCTCTCCTCACAGCAAGTTTTTGGGAGGCTTTGAAAAACAGCTCTaGGCCTGCTATTGGGCCTTA | + |
|
Preference number: 3 (lower is better) Translates to: LKLGLLIQASPHSKFLGGFEKQL*ACYWAL Trigger: TAAGGCCCAATAGCAGGCCAAGAGCTGTTTTTCAAA...GCCTCCCAAAAACTTGCTGTGAGGAGAGGCCTGTATCAAGAGGCCTAGTTTCAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000041782.4 |
||
| 3UTR-3UTR CAA 90 bp | CATTATCATCAAGGTGGGAGCCTGGCAGCATCCAGGCATGATACAGGCAGAGCTTGGCACTTACAGGATTaGTTCAAAGTAGGTAAAAGA | + |
|
Preference number: 3 (lower is better) Translates to: HYHQGGSLAASRHDTGRAWHLQD*FKVGKR Trigger: TCTTTTACCTACTTTGAACAAATCCTGTAAGTGCCA...AGCTCTGCCTGTATCATGCCTGGATGCTGCCAGGCTCCCACCTTGATGATAATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041782.4 |
||
| 3UTR TCA 72 bp | GGACAGCTGCAGTATAATCCCTTTCCAGGGCAACCCTaGAAGATACAGGTGAAGGAAAATCTTCACAATGGG | + |
|
Preference number: 3 (lower is better) Translates to: GQLQYNPFPGQP*KIQVKENLHNG Trigger: CCCATTGTGAAGATTTTCCTTCACCTGTATCTTTCAGGGTTGCCCTGGAAAGGGATTATACTGCAGCTGTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041782.4 |
||
| 3UTR GCA 72 bp | AATGCCTATGGTTTCTACTCCTATTACAATGCCATCTaGTGCCAAGCATGTGCCTATAGCCTCATGGGGTGT | + |
|
Preference number: 3 (lower is better) Translates to: NAYGFYSYYNAI*CQACAYSLMGC Trigger: ACACCCCATGAGGCTATAGGCACATGCTTGGCAGCAGATGGCATTGTAATAGGAGTAGAAACCATAGGCATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041782.4 |
||
| 3UTR CCA 72 bp | CTTGCACTTCCATTCACAGGTGCTCCTGACCACTGTTaGGAGTTAAGACTACAGTCGGTAAACCATCAACAA | + |
|
Preference number: 3 (lower is better) Translates to: LALPFTGAPDHC*ELRLQSVNHQQ Trigger: TTGTTGATGGTTTACCGACTGTAGTCTTAACTCCCAACAGTGGTCAGGAGCACCTGTGAATGGAAGTGCAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041782.4 |
||
| 3UTR TCA 72 bp | ACAGCTCTTGGCCTGCTATTGGGCCTTAGTGGAAACTaGACATTTGATAATAGGACACCAGAATCAGGTTGC | + |
|
Preference number: 3 (lower is better) Translates to: TALGLLLGLSGN*TFDNRTPESGC Trigger: GCAACCTGATTCTGGTGTCCTATTATCAAATGTTCAGTTTCCACTAAGGCCCAATAGCAGGCCAAGAGCTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041782.4 |
||
| 3UTR TCA 72 bp | AGCTCTACCATCATCTGCAGACAACTATTCTCCCTTTaGAAAACAGCTCTTGGCCTGCTATTGGGCCTTAGT | + |
|
Preference number: 3 (lower is better) Translates to: SSTIICRQLFSL*KTALGLLLGLS Trigger: ACTAAGGCCCAATAGCAGGCCAAGAGCTGTTTTTCAAAGGGAGAATAGTTGTCTGCAGATGATGGTAGAGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041782.4 |
||
| 3UTR CCA 72 bp | ATCAGAAATCAAACAAAACACAACAGGCACCTCCAGTaGTCTTCACCCTGGATAGGACGAGTAAGGTTCTCA | + |
|
Preference number: 3 (lower is better) Translates to: IRNQTKHNRHLQ*SSPWIGRVRFS Trigger: TGAGAACCTTACTCGTCCTATCCAGGGTGAAGACCACTGGAGGTGCCTGTTGTGTTTTGTTTGATTTCTGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041782.4 |
||
| 3UTR CCA 72 bp | AAGAAATGGCCAGATGTACAACTGTTTACTGACTCATaGTTTGTAGCCAATGGATTGGCTGGATGGTCAGGG | + |
|
Preference number: 3 (lower is better) Translates to: KKWPDVQLFTDS*FVANGLAGWSG Trigger: CCCTGACCATCCAGCCAATCCATTGGCTACAAACCATGAGTCAGTAAACAGTTGTACATCTGGCCATTTCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041782.4 |
||
| 3UTR-3UTR CAA 90 bp | CTTGATACAGGCCTCTCCTCACAGCAAGTTTTTGGGAGGCTGAGACAGGATTTCAGTTACTTGAAGAAGTaGCTCAAATGCCTATGGTTT | + |
|
Preference number: 3 (lower is better) Translates to: LDTGLSSQQVFGRLRQDFSYLKK*LKCLWF Trigger: AAACCATAGGCATTTGAGCAACTTCTTCAAGTAACT...GAAATCCTGTCTCAGCCTCCCAAAAACTTGCTGTGAGGAGAGGCCTGTATCAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041782.4 |
||
| 3UTR-3UTR CAA 90 bp | TCTGACTTTTATTACCTTTGTGACTGTTTGGATCAAGACCTTCCTGACGCTCCTAAGGCTAAGTCTCACTaGAGTGAGGCCCTATCACAA | + |
|
Preference number: 3 (lower is better) Translates to: SDFYYLCDCLDQDLPDAPKAKSH*SEALSQ Trigger: TTGTGATAGGGCCTCACTCAAGTGAGACTTAGCCTT...AGGAGCGTCAGGAAGGTCTTGATCCAAACAGTCACAAAGGTAATAAAAGTCAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041782.4 |
||
| 3UTR TCA 72 bp | AGTAATGTGGGACATGCAGAGATATTCCTTCTAAGGTaGAAGATAAGTTATTGCACCTGGCCCCTCCCACTA | + |
|
Preference number: 3 (lower is better) Translates to: SNVGHAEIFLLR*KISYCTWPLPL Trigger: TAGTGGGAGGGGCCAGGTGCAATAACTTATCTTTCACCTTAGAAGGAATATCTCTGCATGTCCCACATTACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041782.4 |
||
| 3UTR CCA 72 bp | TCTTCACCCTGGATAGGACGAGTAAGGTTCTCAGGCTaGCACTTACAGGATTTGTTCAAAGTAGGTAAAAGA | + |
|
Preference number: 3 (lower is better) Translates to: SSPWIGRVRFSG*HLQDLFKVGKR Trigger: TCTTTTACCTACTTTGAACAAATCCTGTAAGTGCCAGCCTGAGAACCTTACTCGTCCTATCCAGGGTGAAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041782.4 |
||
| 3UTR CCA 72 bp | TCCAACAAGGCCACTCCTCCAAATAGTGCCACTCTCTaGGCCAAGCATATTCAAACCATGACAGTATTTTTA | + |
|
Preference number: 3 (lower is better) Translates to: SNKATPPNSATL*AKHIQTMTVFL Trigger: TAAAAATACTGTCATGGTTTGAATATGCTTGGCCCAGAGAGTGGCACTATTTGGAGGAGTGGCCTTGTTGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041782.4 |
||
| 3UTR TCA 72 bp | TTGGCAAAAGAAATGGCCAGATGTACAACTGTTTACTaGCTCATGGTTTGTAGCCAATGGATTGGCTGGATG | + |
|
Preference number: 3 (lower is better) Translates to: LAKEMARCTTVY*LMVCSQWIGWM Trigger: CATCCAGCCAATCCATTGGCTACAAACCATGAGTCAGTAAACAGTTGTACATCTGGCCATTTCTTTTGCCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041782.4 |
||
| 3UTR CCA 72 bp | ACCCTGAAAGATACAGGTGAAGGAAAATCTTCACAATaGGCAAAACTTCGGGCAGTACACGTGGTATTAGTT | + |
|
Preference number: 3 (lower is better) Translates to: TLKDTGEGKSSQ*AKLRAVHVVLV Trigger: AACTAATACCACGTGTACTGCCCGAAGTTTTGCCCATTGTGAAGATTTTCCTTCACCTGTATCTTTCAGGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041782.4 |
||
| 3UTR CCA 72 bp | CAAGCAAGTTACTTGAAGAAGTTGCTCAAATGCCTATaGTTTCTACTCCTATTACAATGCCATCTGCTGCCA | + |
|
Preference number: 3 (lower is better) Translates to: QASYLKKLLKCL*FLLLLQCHLLP Trigger: TGGCAGCAGATGGCATTGTAATAGGAGTAGAAACCATAGGCATTTGAGCAACTTCTTCAAGTAACTTGCTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041782.4 |
||
| 3UTR CCA 72 bp | CAGTCTATTATCAAATGGAAGTGGTATATATGTGATTaGGCCAGAGCAGGTCTTGAAGGCACAAGCAAGTTA | + |
|
Preference number: 3 (lower is better) Translates to: QSIIKWKWYICD*ARAGLEGTSKL Trigger: TAACTTGCTTGTGCCTTCAAGACCTGCTCTGGCCCAATCACATATATACCACTTCCATTTGATAATAGACTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041782.4 |
||
| 3UTR CCA 72 bp | GGACATACAAAGCAGCAGTCTATTATCAAATGGAAGTaGTATATATGTGATTGGGCCAGAGCAGGTCTTGAA | + |
|
Preference number: 3 (lower is better) Translates to: GHTKQQSIIKWK*YICDWARAGLE Trigger: TTCAAGACCTGCTCTGGCCCAATCACATATATACCACTTCCATTTGATAATAGACTGCTGCTTTGTATGTCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041782.4 |
||
| 3UTR-3UTR CAA 90 bp | TTAAAAGATAAGGCATGTGATAGCTTGTGGATGCCTTTTCCAGGTAAGGATTTAACCTACATAATGACATaGGAAGAAGGAAGACCCTCC | + |
|
Preference number: 3 (lower is better) Translates to: LKDKACDSLWMPFPGKDLTYIMT*EEGRPS Trigger: GGAGGGTCTTCCTTCTTCCAATGTCATTATGTAGGT...TAAATCCTTACCTGGAAAAGGCATCCACAAGCTATCACATGCCTTATCTTTTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041782.4 |
||
| 3UTR CCA 72 bp | AAAGTAGGACATACAAAGCAGCAGTCTATTATCAAATaGAAGTGGTATATATGTGATTGGGCCAGAGCAGGT | + |
|
Preference number: 3 (lower is better) Translates to: KVGHTKQQSIIK*KWYICDWARAG Trigger: ACCTGCTCTGGCCCAATCACATATATACCACTTCCATTTGATAATAGACTGCTGCTTTGTATGTCCTACTTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041782.4 |
||
| 3UTR-3UTR CAA 90 bp | TTAAAAGATAAGGCATGTGATAGCTTGTGGATGCCTTTTCCAGGTAAGGATTTAGTGGAAACTGAACATTaGATAATAGGACACCAGAAT | + |
|
Preference number: 3 (lower is better) Translates to: LKDKACDSLWMPFPGKDLVETEH*IIGHQN Trigger: ATTCTGGTGTCCTATTATCAAATGTTCAGTTTCCAC...TAAATCCTTACCTGGAAAAGGCATCCACAAGCTATCACATGCCTTATCTTTTAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041782.4 |
||
| CDS-3UTR GCA 90 bp | GGACTTCCACTCACCAAGGCTGACCTGGCTACGGCTGCCGCTGAATGCCAGATCGGAAGGGGCTGCGCTTaGGGGCGCCCATGGGCGTGT | + |
|
Preference number: 4 (lower is better) Translates to: GLPLTKADLATAAAECQIGRGCA*GRPWAC Trigger: ACACGCCCATGGGCGCCCGCAAGCGCAGCCCCTTCC...GATCTGGCATTCAGCGGCAGCCGTAGCCAGGTCAGCCTTGGTGAGTGGAAGTCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041782.4 |
||
| CDS-3UTR CCA 90 bp | GGACTTCCACTCACCAAGGCTGACCTGGCTACGGCTGCCGCTGAATGCCAGATCGTCTCTCTCTTTGCTTaGGCGACCTCTGCTCTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: GLPLTKADLATAAAECQIVSLFA*ATSALR Trigger: CCTGAGAGCAGAGGTCGCCCAAGCAAAGAGAGAGAC...GATCTGGCATTCAGCGGCAGCCGTAGCCAGGTCAGCCTTGGTGAGTGGAAGTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041782.4 |
||
| CDS-3UTR TCA 90 bp | TCTCTGAGTTCAAGGTCATGTGGGACAAAGCAAGTCCCAGATCCAGGAATGGCGAGCAGGTTGCGTACGTaGAGGGGCCGGAATCGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: SLSSRSCGTKQVPDPGMASRLRT*RGRNRG Trigger: GCCGCGATTCCGGCCCCTTCACGTACGCAACCTGCT...CGCCATTCCTGGATCTGGGACTTGCTTTGTCCCACATGACCTTGAACTCAGAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041782.4 |
||
| CDS-3UTR CCA 90 bp | TCTCTGAGTTCAAGGTCATGTGGGACAAAGCAAGTCCCAGATCCAGGAATGGCGTCTTTCCCGCCCTCCTaGCCGTGCAGCTTTCCGGGC | + |
|
Preference number: 4 (lower is better) Translates to: SLSSRSCGTKQVPDPGMASFPPS*PCSFPG Trigger: GCCCGGAAAGCTGCACGGCCAGGAGGGCGGGAAAGA...CGCCATTCCTGGATCTGGGACTTGCTTTGTCCCACATGACCTTGAACTCAGAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041782.4 |
||
| 3UTR CAA 72 bp | GTGAGGAAGGGAACAAGGGGCCAGGGGTTCAGGCTGTaGGAAGCGAAGTTTCAGAAGGTGCTGAGGAAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: VRKGTRGQGFRL*EAKFQKVLRKA Trigger: TGCCTTCCTCAGCACCTTCTGAAACTTCGCTTCCAACAGCCTGAACCCCTGGCCCCTTGTTCCCTTCCTCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041782.4 |
||
| CDS-3UTR CCA 90 bp | TTGAAACTAGGCCTCTTGATACAGGCCTCTCCTCACAGCAAGTTTTTGGGAGGCAATCGCGGCGGGACGTaGCCCAGGTACACAATCCCC | + |
|
Preference number: 4 (lower is better) Translates to: LKLGLLIQASPHSKFLGGNRGGT*PRYTIP Trigger: GGGGATTGTGTACCTGGGCCACGTCCCGCCGCGATT...GCCTCCCAAAAACTTGCTGTGAGGAGAGGCCTGTATCAAGAGGCCTAGTTTCAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041782.4 |
||
| CDS-3UTR GCA 90 bp | TTGAAACTAGGCCTCTTGATACAGGCCTCTCCTCACAGCAAGTTTTTGGGAGGCTCTTCTTGCTGCTGCTaGTGCAGGCCGTGTCCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: LKLGLLIQASPHSKFLGGSSCCC*CRPCPR Trigger: CCGAGGACACGGCCTGCAGCAGCAGCAGCAAGAAGA...GCCTCCCAAAAACTTGCTGTGAGGAGAGGCCTGTATCAAGAGGCCTAGTTTCAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041782.4 |
||
| CDS-3UTR GCA 90 bp | CTGTTGGAAGCGAAGTTTCAGAAGGTGCTGAGGAAGGCAGTCCATGTGATAGACTCCCTTCTTTCCTCCTaGGGCCGCGGCTGCCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: LLEAKFQKVLRKAVHVIDSLLSS*GRGCLL Trigger: AAGAAGGCAGCCGCGGCCGCAGGAGGAAAGAAGGGA...GTCTATCACATGGACTGCCTTCCTCAGCACCTTCTGAAACTTCGCTTCCAACAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041782.4 |
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| CDS-3UTR CCA 90 bp | TTGAAACTAGGCCTCTTGATACAGGCCTCTCCTCACAGCAAGTTTTTGGGAGGCCAAGGAGCCCTCTGTTaGATCGGGCCTGGTCCTCGA | + |
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Preference number: 4 (lower is better) Translates to: LKLGLLIQASPHSKFLGGQGALC*IGPGPR Trigger: TCGAGGACCAGGCCCGATCCAACAGAGGGCTCCTTG...GCCTCCCAAAAACTTGCTGTGAGGAGAGGCCTGTATCAAGAGGCCTAGTTTCAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041782.4 |
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| CDS-3UTR GCA 90 bp | CTTGATACAGGCCTCTCCTCACAGCAAGTTTTTGGGAGGCTGAGACAGGATTTCATCGCAGCCTTTTGCTaGTCCACCAACTCTCCCGCT | + |
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Preference number: 4 (lower is better) Translates to: LDTGLSSQQVFGRLRQDFIAAFC*STNSPA Trigger: AGCGGGAGAGTTGGTGGAGCAGCAAAAGGCTGCGAT...GAAATCCTGTCTCAGCCTCCCAAAAACTTGCTGTGAGGAGAGGCCTGTATCAAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041782.4 |
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| CDS-3UTR GCA 90 bp | CTTGATACAGGCCTCTCCTCACAGCAAGTTTTTGGGAGGCTGAGACAGGATTTCTCTTCTTCTTGCTGCTaGTGCTGCAGGCCGTGTCCT | + |
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Preference number: 4 (lower is better) Translates to: LDTGLSSQQVFGRLRQDFSSSCC*CCRPCP Trigger: AGGACACGGCCTGCAGCAGCAGCAGCAAGAAGAAGA...GAAATCCTGTCTCAGCCTCCCAAAAACTTGCTGTGAGGAGAGGCCTGTATCAAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041782.4 |
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| CDS-3UTR GCA 90 bp | TCTGACTTTTATTACCTTTGTGACTGTTTGGATCAAGACCTTCCTGACGCTCCTCATAACGGAAGGGGCTaGGCTTGCGGGCGCCCATGG | + |
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Preference number: 4 (lower is better) Translates to: SDFYYLCDCLDQDLPDAPHNGRG*ACGRPW Trigger: CCATGGGCGCCCGCAAGCGCAGCCCCTTCCGTTATG...AGGAGCGTCAGGAAGGTCTTGATCCAAACAGTCACAAAGGTAATAAAAGTCAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041782.4 |
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| CDS-3UTR GCA 90 bp | CTTGATACAGGCCTCTCCTCACAGCAAGTTTTTGGGAGGCTGAGACAGGATTTCAGCATCCCCATCAGCTaGAAGGAAGTGTTGTCCCTG | + |
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Preference number: 4 (lower is better) Translates to: LDTGLSSQQVFGRLRQDFSIPIS*KEVLSL Trigger: CAGGGACAACACTTCCTTGCAGCTGATGGGGATGCT...GAAATCCTGTCTCAGCCTCCCAAAAACTTGCTGTGAGGAGAGGCCTGTATCAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041782.4 |
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| CDS-3UTR GCA 90 bp | TTGAAACTAGGCCTCTTGATACAGGCCTCTCCTCACAGCAAGTTTTTGGGAGGCCGGCTGCCTTCTTCTTaGGTTTCACAAAGTGGTCCT | + |
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Preference number: 4 (lower is better) Translates to: LKLGLLIQASPHSKFLGGRLPSS*VSQSGP Trigger: AGGACCACTTTGTGAAACGCAAGAAGAAGGCAGCCG...GCCTCCCAAAAACTTGCTGTGAGGAGAGGCCTGTATCAAGAGGCCTAGTTTCAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041782.4 |
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| CDS-3UTR CCA 90 bp | GCAATCAGAAATCAAACAAAACACAACAGGCACCTCCAGTGGTCTTCACCCTGGCGTTGCCTTCGTACTTaGCGCTCAAAGGCAAGGTGT | + |
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Preference number: 4 (lower is better) Translates to: AIRNQTKHNRHLQWSSPWRCLRT*RSKARC Trigger: ACACCTTGCCTTTGAGCGCCAAGTACGAAGGCAACG...CCAGGGTGAAGACCACTGGAGGTGCCTGTTGTGTTTTGTTTGATTTCTGATTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041782.4 |
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| CDS-3UTR CCA 90 bp | GCAATCAGAAATCAAACAAAACACAACAGGCACCTCCAGTGGTCTTCACCCTGGAGGTGTTCACTGAGGTaGGACCAAGTAAAACGATGC | + |
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Preference number: 4 (lower is better) Translates to: AIRNQTKHNRHLQWSSPWRCSLR*DQVKRC Trigger: GCATCGTTTTACTTGGTCCCACCTCAGTGAACACCT...CCAGGGTGAAGACCACTGGAGGTGCCTGTTGTGTTTTGTTTGATTTCTGATTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041782.4 |
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| 3UTR CAA 72 bp | GTGATCAGCCAGAAACCTGGTGTCAGGTTTACTACATaGGACTACTTCCTCCGTAGAAAGGAGATCTCTGAG | + |
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Preference number: 4 (lower is better) Translates to: VISQKPGVRFTT*DYFLRRKEISE Trigger: CTCAGAGATCTCCTTTCTACGGAGGAAGTAGTCCAATGTAGTAAACCTGACACCAGGTTTCTGGCTGATCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041782.4 |
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| 3UTR CAA 72 bp | ATGGAGACAGGAAAAGTGGCTGGAATGGTAGGATCTTaGAGAGGCTCAGTCTCTGTCTTAGAGTTTAACTGC | + |
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Preference number: 4 (lower is better) Translates to: METGKVAGMVGS*RGSVSVLEFNC Trigger: GCAGTTAAACTCTAAGACAGAGACTGAGCCTCTCAAAGATCCTACCATTCCAGCCACTTTTCCTGTCTCCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041782.4 |
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| 3UTR CAA 72 bp | GGTCTATTTGGATTCTGGAGACAGTATATTACTCACTaGGGTGTGTTACTCAGGCCCATATACCAAGTGACG | + |
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Preference number: 4 (lower is better) Translates to: GLFGFWRQYITH*GVLLRPIYQVT Trigger: CGTCACTTGGTATATGGGCCTGAGTAACACACCCAAGTGAGTAATATACTGTCTCCAGAATCCAAATAGACC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041782.4 |
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| 3UTR CAA 72 bp | ATGGGCAAAACTTCGGGCAGTACACGTGGTATTAGTTaGTTTGGCAAAAGAAATGGCCAGATGTACAACTGT | + |
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Preference number: 4 (lower is better) Translates to: MGKTSGSTRGIS*FGKRNGQMYNC Trigger: ACAGTTGTACATCTGGCCATTTCTTTTGCCAAACAAACTAATACCACGTGTACTGCCCGAAGTTTTGCCCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041782.4 |
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| CDS-3UTR GCA 90 bp | AGTCTATTATCAAATGGAAGTGGTATATATGTGATTGGGCCAGAGCAGGTCTTGGACCAAGTAAAACGATaGAAATACTTGAGGTTCCAC | + |
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Preference number: 4 (lower is better) Translates to: SLLSNGSGIYVIGPEQVLDQVKR*KYLRFH Trigger: GTGGAACCTCAAGTATTTGCATCGTTTTACTTGGTC...CAAGACCTGCTCTGGCCCAATCACATATATACCACTTCCATTTGATAATAGACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041782.4 |
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| 3UTR CAA 72 bp | AGCAACTTACAGAATGAGTTCAAGGCTAAGTCTCACTaGAGTGAGGCCCTATCACAAAATAAGAAAGTTATA | + |
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Preference number: 4 (lower is better) Translates to: SNLQNEFKAKSH*SEALSQNKKVI Trigger: TATAACTTTCTTATTTTGTGATAGGGCCTCACTCAAGTGAGACTTAGCCTTGAACTCATTCTGTAAGTTGCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041782.4 |
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| 3UTR CAA 72 bp | CTATTTATTTATTTAAGAATATTGAAACTAGGCCTCTaGATACAGGCCTCTCCTCACAGCAAGTTTTTGGGA | + |
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Preference number: 4 (lower is better) Translates to: LFIYLRILKLGL*IQASPHSKFLG Trigger: TCCCAAAAACTTGCTGTGAGGAGAGGCCTGTATCAAGAGGCCTAGTTTCAATATTCTTAAATAAATAAATAG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041782.4 |
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| CDS GCA 90 bp | GGTACACAATCCCCGGAACTACCTTCTTCTTCTTCTTGCTGCTGCTaGTGCAGGCCGTGTCCTCGGGCTCCTCCTGATCCTCCGCCGCCT | + |
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Preference number: 5 (lower is better) Translates to: GTQSPELPSSSSCCC*CRPCPRAPPDPPPP Trigger: AGGCGGCGGAGGATCAGGAGGAGCCCGAGGACACGGCCTGCAGCAGCAGCAGCAAGAAGAAGAAGAAGGTAGTTCCGGGGATTGTGTACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041782.4 |
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| CDS GCA 90 bp | GTCCTTGCTGTACTTAGCTCCCTTCTTTCCTCCTGCGGCCGCGGCTaGCTTCTTCTTGCGTTTCACAAAGTGGTCCTCGGCCTGGAAGAA | + |
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Preference number: 5 (lower is better) Translates to: VLAVLSSLLSSCGRG*LLLAFHKVVLGLEE Trigger: TTCTTCCAGGCCGAGGACCACTTTGTGAAACGCAAGAAGAAGGCAGCCGCGGCCGCAGGAGGAAAGAAGGGAGCTAAGTACAGCAAGGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041782.4 |
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| CDS-3UTR CAA 90 bp | CTGTTGGAAGCGAAGTTTCAGAAGGTGCTGAGGAAGGCAGTCCATGTGATAGACGCAAGGAGCCCTCTGTaGGATCGGGCCTGGTCCTCG | + |
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Preference number: 5 (lower is better) Translates to: LLEAKFQKVLRKAVHVIDARSPL*DRAWSS Trigger: CGAGGACCAGGCCCGATCCAACAGAGGGCTCCTTGC...GTCTATCACATGGACTGCCTTCCTCAGCACCTTCTGAAACTTCGCTTCCAACAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041782.4 |
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| CDS-3UTR CAA 90 bp | CTGTTGGAAGCGAAGTTTCAGAAGGTGCTGAGGAAGGCAGTCCATGTGATAGACAGTCTCTCTCTTTGCTaGGGCGACCTCTGCTCTCAG | + |
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Preference number: 5 (lower is better) Translates to: LLEAKFQKVLRKAVHVIDSLSLC*GDLCSQ Trigger: CTGAGAGCAGAGGTCGCCCAAGCAAAGAGAGAGACT...GTCTATCACATGGACTGCCTTCCTCAGCACCTTCTGAAACTTCGCTTCCAACAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041782.4 |
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| CDS-3UTR CAA 90 bp | AGTCTATTATCAAATGGAAGTGGTATATATGTGATTGGGCCAGAGCAGGTCTTGGCGTTGCCTTCGTACTaGGCGCTCAAAGGCAAGGTG | + |
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Preference number: 5 (lower is better) Translates to: SLLSNGSGIYVIGPEQVLALPSY*ALKGKV Trigger: CACCTTGCCTTTGAGCGCCAAGTACGAAGGCAACGC...CAAGACCTGCTCTGGCCCAATCACATATATACCACTTCCATTTGATAATAGACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041782.4 |
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| CDS GCA 72 bp | GTTGGATCGGGCCTGGTCCTCGACATTAGCCAGCCGTaGTCTTTCCCGCCCTCCTGGCCGTGCAGCTTTCCG | + |
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Preference number: 6 (lower is better) Translates to: VGSGLVLDISQP*SFPPSWPCSFP Trigger: CGGAAAGCTGCACGGCCAGGAGGGCGGGAAAGAGCACGGCTGGCTAATGTCGAGGACCAGGCCCGATCCAAC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041782.4 |
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| CDS CCA 72 bp | CTCGACATTAGCCAGCCGTGCTCTTTCCCGCCCTCCTaGCCGTGCAGCTTTCCGGGCCCTAAACTCCTGCTC | + |
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Preference number: 6 (lower is better) Translates to: LDISQPCSFPPS*PCSFPGPKLLL Trigger: GAGCAGGAGTTTAGGGCCCGGAAAGCTGCACGGCCAGGAGGGCGGGAAAGAGCACGGCTGGCTAATGTCGAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041782.4 |
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| CDS GCA 72 bp | CAATCCCCGGAACTACCTTCTTCTTCTTCTTGCTGCTaGTGCTGCAGGCCGTGTCCTCGGGCTCCTCCTGAT | + |
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Preference number: 6 (lower is better) Translates to: QSPELPSSSSCC*CCRPCPRAPPD Trigger: ATCAGGAGGAGCCCGAGGACACGGCCTGCAGCAGCAGCAGCAAGAAGAAGAAGAAGGTAGTTCCGGGGATTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041782.4 |
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| CDS GCA 72 bp | ACACAATCCCCGGAACTACCTTCTTCTTCTTCTTGCTaGTGCTGCTGCAGGCCGTGTCCTCGGGCTCCTCCT | + |
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Preference number: 6 (lower is better) Translates to: TQSPELPSSSSC*CCCRPCPRAPP Trigger: AGGAGGAGCCCGAGGACACGGCCTGCAGCAGCAGCAGCAAGAAGAAGAAGAAGGTAGTTCCGGGGATTGTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041782.4 |
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| CDS GCA 72 bp | GTACTTAGCTCCCTTCTTTCCTCCTGCGGCCGCGGCTaGCTTCTTCTTGCGTTTCACAAAGTGGTCCTCGGC | + |
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Preference number: 6 (lower is better) Translates to: VLSSLLSSCGRG*LLLAFHKVVLG Trigger: GCCGAGGACCACTTTGTGAAACGCAAGAAGAAGGCAGCCGCGGCCGCAGGAGGAAAGAAGGGAGCTAAGTAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041782.4 |
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| CDS GCA 72 bp | ATAGAAGTCAGTCTCTCTCTTTGCTTGGGCGACCTCTaGTCTCAGGCGTTGCCTTCGTACTTGGCGCTCAAA | + |
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Preference number: 6 (lower is better) Translates to: IEVSLSLCLGDL*SQALPSYLALK Trigger: TTTGAGCGCCAAGTACGAAGGCAACGCCTGAGAGCAGAGGTCGCCCAAGCAAAGAGAGAGACTGACTTCTAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041782.4 |
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| CDS GCA 72 bp | CCAGGAGCTATTTGGCCGAGTAGCATCCCCATCAGCTaGAAGGAAGTGTTGTCCCTGTTCTACGTTTCGAAG | + |
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Preference number: 6 (lower is better) Translates to: PGAIWPSSIPIS*KEVLSLFYVSK Trigger: CTTCGAAACGTAGAACAGGGACAACACTTCCTTGCAGCTGATGGGGATGCTACTCGGCCAAATAGCTCCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041782.4 |
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