Pregenerated sensors for ABRAXAS2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030965Ensembl transcript IDs: ENSMUST00000084497.12, ENSMUST00000106161.8, ENSMUST00000129552.2, ENSMUST00000134784.2, ENSMUST00000147786.9
Found 197 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TACAGACTCAGGCCTGGCTTCTCCCTTCTGCCATCTGCTGGTGTGTaGCCTCCCTCCATGACTGCATGCAGCGCAGCATCGCTGGCGTGC | + |
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Preference number: 1 (lower is better) Translates to: YRLRPGFSLLPSAGV*PPSMTACSAASLAC Trigger: GCACGCCAGCGATGCTGCGCTGCATGCAGTCATGGAGGGAGGCCACACACCAGCAGATGGCAGAAGGGAGAAGCCAGGCCTGAGTCTGTA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084497.12 ENSMUST00000129552.2 |
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| 3UTR GCA 90 bp | CTTCTCCCTTCTGCCATCTGCTGGTGTGTGGCCTCCCTCCATGACTaGATGCAGCGCAGCATCGCTGGCGTGCACCAAAAGACAAGGGCC | + |
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Preference number: 1 (lower is better) Translates to: LLPSAICWCVASLHD*MQRSIAGVHQKTRA Trigger: GGCCCTTGTCTTTTGGTGCACGCCAGCGATGCTGCGCTGCATGCAGTCATGGAGGGAGGCCACACACCAGCAGATGGCAGAAGGGAGAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084497.12 ENSMUST00000129552.2 |
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| 3UTR TCA 90 bp | CTGGCTTCTCCCTTCTGCCATCTGCTGGTGTGTGGCCTCCCTCCATaGCTGCATGCAGCGCAGCATCGCTGGCGTGCACCAAAAGACAAG | + |
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Preference number: 1 (lower is better) Translates to: LASPFCHLLVCGLPP*LHAAQHRWRAPKDK Trigger: CTTGTCTTTTGGTGCACGCCAGCGATGCTGCGCTGCATGCAGTCATGGAGGGAGGCCACACACCAGCAGATGGCAGAAGGGAGAAGCCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084497.12 ENSMUST00000129552.2 |
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| 3UTR GCA 90 bp | TCCCTTCTGCCATCTGCTGGTGTGTGGCCTCCCTCCATGACTGCATaGAGCGCAGCATCGCTGGCGTGCACCAAAAGACAAGGGCCTGAT | + |
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Preference number: 1 (lower is better) Translates to: SLLPSAGVWPPSMTA*SAASLACTKRQGPD Trigger: ATCAGGCCCTTGTCTTTTGGTGCACGCCAGCGATGCTGCGCTGCATGCAGTCATGGAGGGAGGCCACACACCAGCAGATGGCAGAAGGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084497.12 ENSMUST00000129552.2 |
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| 3UTR GCA 90 bp | TACCCAGAGGTGAGGACCAGCGGACAGAGGATTCTGGGAGTTCTGTaGACAGGATGCTCCACTCAGGAGCCGCGGCATCTGAGAAAGCAG | + |
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Preference number: 1 (lower is better) Translates to: YPEVRTSGQRILGVL*TGCSTQEPRHLRKQ Trigger: CTGCTTTCTCAGATGCCGCGGCTCCTGAGTGGAGCATCCTGTGCACAGAACTCCCAGAATCCTCTGTCCGCTGGTCCTCACCTCTGGGTA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084497.12 ENSMUST00000129552.2 |
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| 3UTR CCA 90 bp | TGTTCACTACAGACTCAGGCCTGGCTTCTCCCTTCTGCCATCTGCTaGTGTGTGGCCTCCCTCCATGACTGCATGCAGCGCAGCATCGCT | + |
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Preference number: 1 (lower is better) Translates to: CSLQTQAWLLPSAIC*CVASLHDCMQRSIA Trigger: AGCGATGCTGCGCTGCATGCAGTCATGGAGGGAGGCCACACACCAGCAGATGGCAGAAGGGAGAAGCCAGGCCTGAGTCTGTAGTGAACA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084497.12 ENSMUST00000129552.2 |
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| 3UTR TCA 90 bp | AGGATCAGAGGGCTCCGTTTCTGCCAGAGTACTTCTCCCTTCAGCTaGAAACCCAGAATAGGACATCCGAGGGCTGAACGCTGGCTCCAG | + |
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Preference number: 1 (lower is better) Translates to: RIRGLRFCQSTSPFS*KPRIGHPRAERWLQ Trigger: CTGGAGCCAGCGTTCAGCCCTCGGATGTCCTATTCTGGGTTTTCAGCTGAAGGGAGAAGTACTCTGGCAGAAACGGAGCCCTCTGATCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129552.2 |
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| 3UTR TCA 90 bp | CTCCAGCTGCACTCTGGGAAGGAAGAAGATCTGCTCCACTTCCAGTaGACTTCAGTCCGCCACTGGTGGAAGCATAGCTGGAAGAGCCCA | + |
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Preference number: 1 (lower is better) Translates to: LQLHSGKEEDLLHFQ*TSVRHWWKHSWKSP Trigger: TGGGCTCTTCCAGCTATGCTTCCACCAGTGGCGGACTGAAGTTCACTGGAAGTGGAGCAGATCTTCTTCCTTCCCAGAGTGCAGCTGGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129552.2 |
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| 3UTR GCA 90 bp | CTCCTCCCCACTGTCTCCAGCTGCACTCTGGGAAGGAAGAAGATCTaGTCCACTTCCAGTGAACTTCAGTCCGCCACTGGTGGAAGCATA | + |
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Preference number: 1 (lower is better) Translates to: LLPTVSSCTLGRKKI*STSSELQSATGGSI Trigger: TATGCTTCCACCAGTGGCGGACTGAAGTTCACTGGAAGTGGAGCAGATCTTCTTCCTTCCCAGAGTGCAGCTGGAGACAGTGGGGAGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129552.2 |
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| 3UTR TCA 90 bp | TGGGAGTTCTGTGCACAGGATGCTCCACTCAGGAGCCGCGGCATCTaGGAAAGCAGGTCTCCCCACAGATTAAGTCCTCAACAACACTCA | + |
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Preference number: 1 (lower is better) Translates to: WEFCAQDAPLRSRGI*ESRSPHRLSPQQHS Trigger: TGAGTGTTGTTGAGGACTTAATCTGTGGGGAGACCTGCTTTCTCAGATGCCGCGGCTCCTGAGTGGAGCATCCTGTGCACAGAACTCCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084497.12 ENSMUST00000129552.2 |
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| 3UTR CCA 90 bp | GTTAAATCCACTGTGTCTGGGATCTGTTCACTACAGACTCAGGCCTaGCTTCTCCCTTCTGCCATCTGCTGGTGTGTGGCCTCCCTCCAT | + |
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Preference number: 1 (lower is better) Translates to: VKSTVSGICSLQTQA*LLPSAICWCVASLH Trigger: ATGGAGGGAGGCCACACACCAGCAGATGGCAGAAGGGAGAAGCCAGGCCTGAGTCTGTAGTGAACAGATCCCAGACACAGTGGATTTAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084497.12 ENSMUST00000129552.2 |
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| 3UTR TCA 90 bp | TGGTGGAAGCATAGCTGGAAGAGCCCACAGCCTGAGGACGGGGCATaGAGACACTCCTTTCCATGCGAGAATGGCTCAGAGTACTTTCTT | + |
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Preference number: 1 (lower is better) Translates to: WWKHSWKSPQPEDGA*RHSFPCENGSEYFL Trigger: AAGAAAGTACTCTGAGCCATTCTCGCATGGAAAGGAGTGTCTTCATGCCCCGTCCTCAGGCTGTGGGCTCTTCCAGCTATGCTTCCACCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129552.2 |
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| 3UTR TCA 90 bp | ACTAGTCCAAGGAAGGCAGTTCAGCGCCAAGCATCATGGGCTGATTaGTTGCCATATATGGTAGGTCTTGCCACTTCCAATCCAGCAGCC | + |
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Preference number: 1 (lower is better) Translates to: TSPRKAVQRQASWAD*LPYMVGLATSNPAA Trigger: GGCTGCTGGATTGGAAGTGGCAAGACCTACCATATATGGCAATCAATCAGCCCATGATGCTTGGCGCTGAACTGCCTTCCTTGGACTAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084497.12 ENSMUST00000129552.2 |
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| 3UTR GCA 90 bp | AAAGTAAAGAGGCGATACAATAGACTAATGCAAGAAGGGGTGGAGTaGAGGTTAGTGGTGGAGCACGTGCTTAGCCTGGGAACCCTGTGC | + |
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Preference number: 1 (lower is better) Translates to: KVKRRYNRLMQEGVE*RLVVEHVLSLGTLC Trigger: GCACAGGGTTCCCAGGCTAAGCACGTGCTCCACCACTAACCTGCACTCCACCCCTTCTTGCATTAGTCTATTGTATCGCCTCTTTACTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106161.8 |
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| 3UTR CCA 90 bp | ACTCCTTTCCATGCGAGAATGGCTCAGAGTACTTTCTTGATTGTTTaGGTGGAAATCAGAGTAAGGGGGCGGAGGATCAGAGGGCTCCGT | + |
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Preference number: 1 (lower is better) Translates to: TPFHARMAQSTFLIV*VEIRVRGRRIRGLR Trigger: ACGGAGCCCTCTGATCCTCCGCCCCCTTACTCTGATTTCCACCCAAACAATCAAGAAAGTACTCTGAGCCATTCTCGCATGGAAAGGAGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000129552.2 |
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| 3UTR CCA 90 bp | GAGAGTGTCATTTGTTTACTTAAATCTGGGAGGTCTGAGTGTTCCTaGGGTCCTCGTCAGGATGTGTCGAGGGCCGTGAATTCTTTGAAT | + |
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Preference number: 1 (lower is better) Translates to: ESVICLLKSGRSECS*GPRQDVSRAVNSLN Trigger: ATTCAAAGAATTCACGGCCCTCGACACATCCTGACGAGGACCCCAGGAACACTCAGACCTCCCAGATTTAAGTAAACAAATGACACTCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129552.2 |
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| 3UTR TCA 90 bp | CCTGCTGCAATCTTCTTTCTTGTTCCTTTTCATTTTTCTTCTGAGTaGTTTGTCTTCTCAATTTGTTCACTTCTGCCTGACAAGATTCAA | + |
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Preference number: 1 (lower is better) Translates to: PAAIFFLVPFHFSSE*FVFSICSLLPDKIQ Trigger: TTGAATCTTGTCAGGCAGAAGTGAACAAATTGAGAAGACAAATCACTCAGAAGAAAAATGAAAAGGAACAAGAAAGAAGATTGCAGCAGG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000129552.2 |
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| 3UTR-3UTR TCA 90 bp | ACCAGGATAGCAGTTACAATGCAGACCCTGGGGCACAATCAAAGCAGGACGGTCTGTGGCCTCCCTCCATaGCTGCATGCAGCGCAGCAT | + |
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Preference number: 2 (lower is better) Translates to: TRIAVTMQTLGHNQSRTVCGLPP*LHAAQH Trigger: ATGCTGCGCTGCATGCAGTCATGGAGGGAGGCCACA...GACCGTCCTGCTTTGATTGTGCCCCAGGGTCTGCATTGTAACTGCTATCCTGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084497.12 ENSMUST00000129552.2 |
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| 3UTR-3UTR GCA 90 bp | AAATCCACTGTGTCTGGGATCTGTTCACTACAGACTCAGGCCTGGCTTCTCCCTGCCTCCCTCCATGACTaGATGCAGCGCAGCATCGCT | + |
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Preference number: 2 (lower is better) Translates to: KSTVSGICSLQTQAWLLPASLHD*MQRSIA Trigger: AGCGATGCTGCGCTGCATGCAGTCATGGAGGGAGGC...AGGGAGAAGCCAGGCCTGAGTCTGTAGTGAACAGATCCCAGACACAGTGGATTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084497.12 ENSMUST00000129552.2 |
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| 3UTR-3UTR GCA 90 bp | AAATCCACTGTGTCTGGGATCTGTTCACTACAGACTCAGGCCTGGCTTCTCCCTCTCCCTTCTGCCATCTaGTGGTGTGTGGCCTCCCTC | + |
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Preference number: 2 (lower is better) Translates to: KSTVSGICSLQTQAWLLPLPSAI*WCVASL Trigger: GAGGGAGGCCACACACCAGCAGATGGCAGAAGGGAG...AGGGAGAAGCCAGGCCTGAGTCTGTAGTGAACAGATCCCAGACACAGTGGATTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084497.12 ENSMUST00000129552.2 |
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| 3UTR-3UTR CCA 90 bp | GGAAGTGGTGTGAGCCCAGAAAACCAGGATAGCAGTTACAATGCAGACCCTGGGCCATCTGCTGGTGTGTaGCCTCCCTCCATGACTGCA | + |
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Preference number: 2 (lower is better) Translates to: GSGVSPENQDSSYNADPGPSAGV*PPSMTA Trigger: TGCAGTCATGGAGGGAGGCCACACACCAGCAGATGG...CCCAGGGTCTGCATTGTAACTGCTATCCTGGTTTTCTGGGCTCACACCACTTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084497.12 ENSMUST00000129552.2 |
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| 3UTR-3UTR TCA 90 bp | TCCTTACGCGTTTTAACTAGTCCAAGGAAGGCAGTTCAGCGCCAAGCATCATGGCACTGTACCCAGAGGTaGGGACCAGCGGACAGAGGA | + |
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Preference number: 2 (lower is better) Translates to: SLRVLTSPRKAVQRQASWHCTQR*GPADRG Trigger: TCCTCTGTCCGCTGGTCCTCACCTCTGGGTACAGTG...CCATGATGCTTGGCGCTGAACTGCCTTCCTTGGACTAGTTAAAACGCGTAAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084497.12 ENSMUST00000129552.2 |
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| 3UTR-3UTR TCA 90 bp | TCCTCCACAACTCTAGCCCAGGATCCGCCACACCTAAGTACATTACATCCTTTCGAAGAGCCCACAGCCTaGGGACGGGGCATGAAGACA | + |
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Preference number: 2 (lower is better) Translates to: SSTTLAQDPPHLSTLHPFEEPTA*GRGMKT Trigger: TGTCTTCATGCCCCGTCCTCAGGCTGTGGGCTCTTC...GAAAGGATGTAATGTACTTAGGTGTGGCGGATCCTGGGCTAGAGTTGTGGAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129552.2 |
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| 3UTR-3UTR CCA 90 bp | AGGATAGCAGTTACAATGCAGACCCTGGGGCACAATCAAAGCAGGACGGTCAGCCTACAGACTCAGGCCTaGCTTCTCCCTTCTGCCATC | + |
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Preference number: 2 (lower is better) Translates to: RIAVTMQTLGHNQSRTVSLQTQA*LLPSAI Trigger: GATGGCAGAAGGGAGAAGCCAGGCCTGAGTCTGTAG...GCTGACCGTCCTGCTTTGATTGTGCCCCAGGGTCTGCATTGTAACTGCTATCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084497.12 ENSMUST00000129552.2 |
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| 3UTR-3UTR CCA 90 bp | GGAAGTGGTGTGAGCCCAGAAAACCAGGATAGCAGTTACAATGCAGACCCTGGGCTACAGACTCAGGCCTaGCTTCTCCCTTCTGCCATC | + |
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Preference number: 2 (lower is better) Translates to: GSGVSPENQDSSYNADPGLQTQA*LLPSAI Trigger: GATGGCAGAAGGGAGAAGCCAGGCCTGAGTCTGTAG...CCCAGGGTCTGCATTGTAACTGCTATCCTGGTTTTCTGGGCTCACACCACTTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084497.12 ENSMUST00000129552.2 |
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| 3UTR-3UTR CCA 90 bp | GGAAGTGGTGTGAGCCCAGAAAACCAGGATAGCAGTTACAATGCAGACCCTGGGGCGGACAGAGGATTCTaGGAGTTCTGTGCACAGGAT | + |
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Preference number: 2 (lower is better) Translates to: GSGVSPENQDSSYNADPGADRGF*EFCAQD Trigger: ATCCTGTGCACAGAACTCCCAGAATCCTCTGTCCGC...CCCAGGGTCTGCATTGTAACTGCTATCCTGGTTTTCTGGGCTCACACCACTTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084497.12 ENSMUST00000129552.2 |
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| 3UTR-3UTR GCA 90 bp | ACTTCCAGTGAACTTCAGTCCGCCACTGGTGGAAGCATAGCTGGAAGAGCCCACAGACACTCCTTTCCATaGGAGAATGGCTCAGAGTAC | + |
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Preference number: 2 (lower is better) Translates to: TSSELQSATGGSIAGRAHRHSFP*ENGSEY Trigger: GTACTCTGAGCCATTCTCGCATGGAAAGGAGTGTCT...GTGGGCTCTTCCAGCTATGCTTCCACCAGTGGCGGACTGAAGTTCACTGGAAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129552.2 |
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| 3UTR-3UTR CCA 90 bp | AAAACGTCTTTCCTCCACAACTCTAGCCCAGGATCCGCCACACCTAAGTACATTCCATCTGCTGGTGTGTaGCCTCCCTCCATGACTGCA | + |
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Preference number: 2 (lower is better) Translates to: KTSFLHNSSPGSATPKYIPSAGV*PPSMTA Trigger: TGCAGTCATGGAGGGAGGCCACACACCAGCAGATGG...AATGTACTTAGGTGTGGCGGATCCTGGGCTAGAGTTGTGGAGGAAAGACGTTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084497.12 ENSMUST00000129552.2 |
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| 3UTR CAA 90 bp | TGTTCCTGGGGTCCTCGTCAGGATGTGTCGAGGGCCGTGAATTCTTaGAATGTGAGTATTCGCTATGAGGGGACTCTGCAGGATCAATCA | + |
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Preference number: 2 (lower is better) Translates to: CSWGPRQDVSRAVNS*NVSIRYEGTLQDQS Trigger: TGATTGATCCTGCAGAGTCCCCTCATAGCGAATACTCACATTCAAAGAATTCACGGCCCTCGACACATCCTGACGAGGACCCCAGGAACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129552.2 |
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| 3UTR-3UTR TCA 90 bp | AAATCTGAACAGAAGAGATGGCGATGGCACTTTAACAGACTGGACTTCATACCGTGTGGCCTCCCTCCATaGCTGCATGCAGCGCAGCAT | + |
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Preference number: 2 (lower is better) Translates to: KSEQKRWRWHFNRLDFIPCGLPP*LHAAQH Trigger: ATGCTGCGCTGCATGCAGTCATGGAGGGAGGCCACA...CGGTATGAAGTCCAGTCTGTTAAAGTGCCATCGCCATCTCTTCTGTTCAGATTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084497.12 ENSMUST00000129552.2 |
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| 3UTR-3UTR TCA 90 bp | TCGACATTCAAATCAAACGGAAGTGGTGTGAGCCCAGAAAACCAGGATAGCAGTCTGCTCCACTTCCAGTaGACTTCAGTCCGCCACTGG | + |
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Preference number: 2 (lower is better) Translates to: STFKSNGSGVSPENQDSSLLHFQ*TSVRHW Trigger: CCAGTGGCGGACTGAAGTTCACTGGAAGTGGAGCAG...ACTGCTATCCTGGTTTTCTGGGCTCACACCACTTCCGTTTGATTTGAATGTCGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129552.2 |
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| 3UTR-3UTR CCA 90 bp | AGGCCTGGCTTCTCCCTTCTGCCATCTGCTGGTGTGTGGCCTCCCTCCATGACTAAAAGTAGTGCCAAGTaGAGAGTGTCATTTGTTTAC | + |
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Preference number: 2 (lower is better) Translates to: RPGFSLLPSAGVWPPSMTKSSAK*RVSFVY Trigger: GTAAACAAATGACACTCTCCACTTGGCACTACTTTT...AGTCATGGAGGGAGGCCACACACCAGCAGATGGCAGAAGGGAGAAGCCAGGCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084497.12 ENSMUST00000129552.2 |
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| 3UTR-3UTR CCA 90 bp | CTGTGTCTGGGATCTGTTCACTACAGACTCAGGCCTGGCTTCTCCCTTCTGCCACAGATGAGTACTCGCTaGGGATTAGTATTCCTACAT | + |
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Preference number: 2 (lower is better) Translates to: LCLGSVHYRLRPGFSLLPQMSTR*GLVFLH Trigger: ATGTAGGAATACTAATCCCCAGCGAGTACTCATCTG...TGGCAGAAGGGAGAAGCCAGGCCTGAGTCTGTAGTGAACAGATCCCAGACACAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084497.12 ENSMUST00000129552.2 |
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| 3UTR-3UTR TCA 90 bp | AAATCCACTGTGTCTGGGATCTGTTCACTACAGACTCAGGCCTGGCTTCTCCCTTTGTTCACTTCTGCCTaGCAAGATTCAACAACTCGC | + |
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Preference number: 2 (lower is better) Translates to: KSTVSGICSLQTQAWLLPLFTSA*QDSTTR Trigger: GCGAGTTGTTGAATCTTGTCAGGCAGAAGTGAACAA...AGGGAGAAGCCAGGCCTGAGTCTGTAGTGAACAGATCCCAGACACAGTGGATTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129552.2 |
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| 3UTR CAA 90 bp | CATGAAGACACTCCTTTCCATGCGAGAATGGCTCAGAGTACTTTCTaGATTGTTTGGGTGGAAATCAGAGTAAGGGGGCGGAGGATCAGA | + |
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Preference number: 2 (lower is better) Translates to: HEDTPFHARMAQSTF*IVWVEIRVRGRRIR Trigger: TCTGATCCTCCGCCCCCTTACTCTGATTTCCACCCAAACAATCAAGAAAGTACTCTGAGCCATTCTCGCATGGAAAGGAGTGTCTTCATG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000129552.2 |
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| 3UTR-3UTR TCA 90 bp | TACTGCCTGTACTTTCTCCTGAAGTGCATTATAAACCTGATAAATTGCCCTGATCACTGTACCCAGAGGTaGGGACCAGCGGACAGAGGA | + |
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Preference number: 2 (lower is better) Translates to: YCLYFLLKCIINLINCPDHCTQR*GPADRG Trigger: TCCTCTGTCCGCTGGTCCTCACCTCTGGGTACAGTG...ATCAGGGCAATTTATCAGGTTTATAATGCACTTCAGGAGAAAGTACAGGCAGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129552.2 |
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| 3UTR-3UTR TCA 90 bp | TCCTCCACAACTCTAGCCCAGGATCCGCCACACCTAAGTACATTACATCCTTTCAGACGTGTTTGGCACTaGAGACACTTTGTACTCTTG | + |
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Preference number: 2 (lower is better) Translates to: SSTTLAQDPPHLSTLHPFRRVWH*RHFVLL Trigger: CAAGAGTACAAAGTGTCTTCAGTGCCAAACACGTCT...GAAAGGATGTAATGTACTTAGGTGTGGCGGATCCTGGGCTAGAGTTGTGGAGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129552.2 |
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| 3UTR-3UTR CCA 90 bp | AGTGCATCCCAATGGTCTCCGCACATTTGCAATTATCCCCTAAATGGCAACTTTGCGGACAGAGGATTCTaGGAGTTCTGTGCACAGGAT | + |
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Preference number: 2 (lower is better) Translates to: SASQWSPHICNYPLNGNFADRGF*EFCAQD Trigger: ATCCTGTGCACAGAACTCCCAGAATCCTCTGTCCGC...AAAGTTGCCATTTAGGGGATAATTGCAAATGTGCGGAGACCATTGGGATGCACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084497.12 ENSMUST00000129552.2 |
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| 3UTR-3UTR TCA 90 bp | AAAACGTCTTTCCTCCACAACTCTAGCCCAGGATCCGCCACACCTAAGTACATTACTTCTCCCTTCAGCTaGAAACCCAGAATAGGACAT | + |
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Preference number: 2 (lower is better) Translates to: KTSFLHNSSPGSATPKYITSPFS*KPRIGH Trigger: ATGTCCTATTCTGGGTTTTCAGCTGAAGGGAGAAGT...AATGTACTTAGGTGTGGCGGATCCTGGGCTAGAGTTGTGGAGGAAAGACGTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129552.2 |
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| 3UTR-3UTR TCA 90 bp | AGTGCATCCCAATGGTCTCCGCACATTTGCAATTATCCCCTAAATGGCAACTTTATAATCACTGTCATCTaGCTCCTCCCCACTGTCTCC | + |
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Preference number: 2 (lower is better) Translates to: SASQWSPHICNYPLNGNFIITVI*LLPTVS Trigger: GGAGACAGTGGGGAGGAGTCAGATGACAGTGATTAT...AAAGTTGCCATTTAGGGGATAATTGCAAATGTGCGGAGACCATTGGGATGCACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129552.2 |
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| 3UTR-3UTR GCA 90 bp | TCGACATTCAAATCAAACGGAAGTGGTGTGAGCCCAGAAAACCAGGATAGCAGTTTTGTTGTGAACCTGTaGACTGTACCCAGAGGTGAG | + |
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Preference number: 2 (lower is better) Translates to: STFKSNGSGVSPENQDSSFVVNL*TVPRGE Trigger: CTCACCTCTGGGTACAGTGCACAGGTTCACAACAAA...ACTGCTATCCTGGTTTTCTGGGCTCACACCACTTCCGTTTGATTTGAATGTCGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084497.12 ENSMUST00000129552.2 |
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| 3UTR-3UTR GCA 90 bp | AGGATAGCAGTTACAATGCAGACCCTGGGGCACAATCAAAGCAGGACGGTCAGCACTCTTTTCTACATCTaGACATACTGCCTGTACTTT | + |
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Preference number: 2 (lower is better) Translates to: RIAVTMQTLGHNQSRTVSTLFYI*TYCLYF Trigger: AAAGTACAGGCAGTATGTGCAGATGTAGAAAAGAGT...GCTGACCGTCCTGCTTTGATTGTGCCCCAGGGTCTGCATTGTAACTGCTATCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129552.2 |
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| 3UTR-3UTR GCA 90 bp | TCCTTACGCGTTTTAACTAGTCCAAGGAAGGCAGTTCAGCGCCAAGCATCATGGGCTATGAGGGGACTCTaGAGGATCAATCAAATTTTC | + |
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Preference number: 2 (lower is better) Translates to: SLRVLTSPRKAVQRQASWAMRGL*RINQIF Trigger: GAAAATTTGATTGATCCTGCAGAGTCCCCTCATAGC...CCATGATGCTTGGCGCTGAACTGCCTTCCTTGGACTAGTTAAAACGCGTAAGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000129552.2 |
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| 3UTR-3UTR GCA 90 bp | AGTGCATCCCAATGGTCTCCGCACATTTGCAATTATCCCCTAAATGGCAACTTTTTTGTTGTGAACCTGTaGACTGTACCCAGAGGTGAG | + |
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Preference number: 2 (lower is better) Translates to: SASQWSPHICNYPLNGNFFVVNL*TVPRGE Trigger: CTCACCTCTGGGTACAGTGCACAGGTTCACAACAAA...AAAGTTGCCATTTAGGGGATAATTGCAAATGTGCGGAGACCATTGGGATGCACT 46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000084497.12 ENSMUST00000129552.2 |
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| 3UTR-3UTR TCA 90 bp | TCGACATTCAAATCAAACGGAAGTGGTGTGAGCCCAGAAAACCAGGATAGCAGTGAGAGAAGGAATGTCTaGCTTGTTCCAATTAGGCTT | + |
|
Preference number: 2 (lower is better) Translates to: STFKSNGSGVSPENQDSSERRNV*LVPIRL Trigger: AAGCCTAATTGGAACAAGTCAGACATTCCTTCTCTC...ACTGCTATCCTGGTTTTCTGGGCTCACACCACTTCCGTTTGATTTGAATGTCGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084497.12 ENSMUST00000129552.2 |
||
| 3UTR-3UTR CCA 90 bp | TCCTTACGCGTTTTAACTAGTCCAAGGAAGGCAGTTCAGCGCCAAGCATCATGGTGGTTTCACACATTCTaGGCAAAACTAGAAAACAAG | + |
|
Preference number: 2 (lower is better) Translates to: SLRVLTSPRKAVQRQASWWFHTF*AKLENK Trigger: CTTGTTTTCTAGTTTTGCCCAGAATGTGTGAAACCA...CCATGATGCTTGGCGCTGAACTGCCTTCCTTGGACTAGTTAAAACGCGTAAGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000084497.12 ENSMUST00000129552.2 |
||
| 3UTR-3UTR TCA 90 bp | TCGACATTCAAATCAAACGGAAGTGGTGTGAGCCCAGAAAACCAGGATAGCAGTCTCAGAGTACTTTCTTaGTTGTTTGGGTGGAAATCA | + |
|
Preference number: 2 (lower is better) Translates to: STFKSNGSGVSPENQDSSLRVLS*LFGWKS Trigger: TGATTTCCACCCAAACAATCAAGAAAGTACTCTGAG...ACTGCTATCCTGGTTTTCTGGGCTCACACCACTTCCGTTTGATTTGAATGTCGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129552.2 |
||
| 3UTR-3UTR TCA 90 bp | CTGAAGTGCATTATAAACCTGATAAATTGCCCTGATGTCCTTCATGACTCCATCAGACGTGTTTGGCACTaGAGACACTTTGTACTCTTG | + |
|
Preference number: 2 (lower is better) Translates to: LKCIINLINCPDVLHDSIRRVWH*RHFVLL Trigger: CAAGAGTACAAAGTGTCTTCAGTGCCAAACACGTCT...GATGGAGTCATGAAGGACATCAGGGCAATTTATCAGGTTTATAATGCACTTCAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000129552.2 ENSMUST00000134784.2 ENSMUST00000147786.9 |
||
| 3UTR-3UTR GCA 90 bp | CTCACTCTTTTCTACATCTGCACATACTGCCTGTACTTTCTCCTGAAGTGCATTTACATCTGCACATACTaGCTGTACTTTCTCCTGAAG | + |
|
Preference number: 2 (lower is better) Translates to: LTLFYICTYCLYFLLKCIYICTY*LYFLLK Trigger: CTTCAGGAGAAAGTACAGGCAGTATGTGCAGATGTA...AATGCACTTCAGGAGAAAGTACAGGCAGTATGTGCAGATGTAGAAAAGAGTGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129552.2 ENSMUST00000147786.9 |
||
| 3UTR-3UTR CCA 90 bp | AAAGTCAGTACCGTGCTCTTTAATGACCTTGGCATAACTCTGAGACGTGTTTGGACTTTGTACTCTTGCTaGCTAGTATTGCCTAGATTG | + |
|
Preference number: 2 (lower is better) Translates to: KVSTVLFNDLGITLRRVWTLYSC*LVLPRL Trigger: CAATCTAGGCAATACTAGCCAGCAAGAGTACAAAGT...CCAAACACGTCTCAGAGTTATGCCAAGGTCATTAAAGAGCACGGTACTGACTTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000134784.2 ENSMUST00000147786.9 |
||
| 3UTR-3UTR TCA 90 bp | AGTGCATCCCAATGGTCTCCGCACATTTGCAATTATCCCCTAAATGGCAACTTTCTTTTCTGGCAAAGATaGATTTGGCTCATCATAGAA | + |
|
Preference number: 2 (lower is better) Translates to: SASQWSPHICNYPLNGNFLFWQR*IWLIIE Trigger: TTCTATGATGAGCCAAATTCATCTTTGCCAGAAAAG...AAAGTTGCCATTTAGGGGATAATTGCAAATGTGCGGAGACCATTGGGATGCACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084497.12 ENSMUST00000129552.2 |
||
| 3UTR-3UTR TCA 90 bp | AAATCTGAACAGAAGAGATGGCGATGGCACTTTAACAGACTGGACTTCATACCGCTTTTCTGGCAAAGATaGATTTGGCTCATCATAGAA | + |
|
Preference number: 2 (lower is better) Translates to: KSEQKRWRWHFNRLDFIPLFWQR*IWLIIE Trigger: TTCTATGATGAGCCAAATTCATCTTTGCCAGAAAAG...CGGTATGAAGTCCAGTCTGTTAAAGTGCCATCGCCATCTCTTCTGTTCAGATTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084497.12 ENSMUST00000129552.2 |
||
| 3UTR-3UTR TCA 90 bp | CTGTACTTTCTCCTGAAGTGCATTATAAACCTGATAAATTGCCCTGATGTCCTTAGACGTGTTTGGCACTaGAGACACTTTGTACTCTTG | + |
|
Preference number: 2 (lower is better) Translates to: LYFLLKCIINLINCPDVLRRVWH*RHFVLL Trigger: CAAGAGTACAAAGTGTCTTCAGTGCCAAACACGTCT...AAGGACATCAGGGCAATTTATCAGGTTTATAATGCACTTCAGGAGAAAGTACAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000129552.2 ENSMUST00000134784.2 ENSMUST00000147786.9 |
||
| 3UTR-3UTR TCA 90 bp | GTCTTCTCAATTTGTTCACTTCTGCCTGACAAGATTCAACAACTCGCTCACTCTACATATTCTAAAGCATaGGTAGAATTGTTGGCGGTA | + |
|
Preference number: 2 (lower is better) Translates to: VFSICSLLPDKIQQLAHSTYSKA*VELLAV Trigger: TACCGCCAACAATTCTACTCATGCTTTAGAATATGT...AGAGTGAGCGAGTTGTTGAATCTTGTCAGGCAGAAGTGAACAAATTGAGAAGAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147786.9 |
||
| 3UTR-3UTR GCA 90 bp | GTCTTCTCAATTTGTTCACTTCTGCCTGACAAGATTCAACAACTCGCTCACTCTACTCTTTTCTACATCTaGACATACTGCCTGTACTTT | + |
|
Preference number: 2 (lower is better) Translates to: VFSICSLLPDKIQQLAHSTLFYI*TYCLYF Trigger: AAAGTACAGGCAGTATGTGCAGATGTAGAAAAGAGT...AGAGTGAGCGAGTTGTTGAATCTTGTCAGGCAGAAGTGAACAAATTGAGAAGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129552.2 ENSMUST00000147786.9 |
||
| 3UTR-3UTR GCA 90 bp | CTCACTCTTTTCTACATCTGCACATACTGCCTGTACTTTCTCCTGAAGTGCATTCAATTTGTTCACTTCTaGCTGACAAGATTCAACAAC | + |
|
Preference number: 2 (lower is better) Translates to: LTLFYICTYCLYFLLKCIQFVHF*LTRFNN Trigger: GTTGTTGAATCTTGTCAGGCAGAAGTGAACAAATTG...AATGCACTTCAGGAGAAAGTACAGGCAGTATGTGCAGATGTAGAAAAGAGTGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129552.2 ENSMUST00000147786.9 |
||
| 3UTR-3UTR CCA 90 bp | TCTTCTCAATTTGTTCACTTCTGCCTGACAAGATTCAACAACTCGCTCACTCTTACTTTGTACTCTTGCTaGCTAGTATTGCCTAGATTG | + |
|
Preference number: 2 (lower is better) Translates to: SSQFVHFCLTRFNNSLTLTLYSC*LVLPRL Trigger: CAATCTAGGCAATACTAGCCAGCAAGAGTACAAAGT...AAGAGTGAGCGAGTTGTTGAATCTTGTCAGGCAGAAGTGAACAAATTGAGAAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147786.9 |
||
| 3UTR-3UTR GCA 90 bp | TTTCTCCTGAAGTGCATTATAAACCTGATAAATTGCCCTGATGTCCTTCATGACAAAAAGTCAGTACCGTaGTCTTTAATGACCTTGGCA | + |
|
Preference number: 2 (lower is better) Translates to: FLLKCIINLINCPDVLHDKKSVP*SLMTLA Trigger: TGCCAAGGTCATTAAAGAGCACGGTACTGACTTTTT...GTCATGAAGGACATCAGGGCAATTTATCAGGTTTATAATGCACTTCAGGAGAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000129552.2 ENSMUST00000134784.2 ENSMUST00000147786.9 |
||
| 3UTR-3UTR CCA 90 bp | TCTCAATTTGTTCACTTCTGCCTGACAAGATTCAACAACTCGCTCACTCTTTTCAAAAGTAGTGCCAAGTaGAGAGTGTCATTTGTTTAC | + |
|
Preference number: 2 (lower is better) Translates to: SQFVHFCLTRFNNSLTLFKSSAK*RVSFVY Trigger: GTAAACAAATGACACTCTCCACTTGGCACTACTTTT...GAAAAGAGTGAGCGAGTTGTTGAATCTTGTCAGGCAGAAGTGAACAAATTGAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129552.2 |
||
| 3UTR-3UTR GCA 90 bp | TTTCTCCTGAAGTGCATTATAAACCTGATAAATTGCCCTGATGTCCTTCATGACATAAACCTGATAAATTaGCCTGATGTCCTTCATGAC | + |
|
Preference number: 2 (lower is better) Translates to: FLLKCIINLINCPDVLHDINLIN*PDVLHD Trigger: GTCATGAAGGACATCAGGGCAATTTATCAGGTTTAT...GTCATGAAGGACATCAGGGCAATTTATCAGGTTTATAATGCACTTCAGGAGAAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000129552.2 ENSMUST00000134784.2 ENSMUST00000147786.9 |
||
| 3UTR-3UTR GCA 90 bp | ACAACACTCAATAAGCCATTAAGAAAAGTAGTGCCAAGTGGAGAGTGTCATTTGCAATTTGTTCACTTCTaGCTGACAAGATTCAACAAC | + |
|
Preference number: 2 (lower is better) Translates to: TTLNKPLRKVVPSGECHLQFVHF*LTRFNN Trigger: GTTGTTGAATCTTGTCAGGCAGAAGTGAACAAATTG...CAAATGACACTCTCCACTTGGCACTACTTTTCTTAATGGCTTATTGAGTGTTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129552.2 |
||
| 3UTR CCA 72 bp | AGGCCTGGCTTCTCCCTTCTGCCATCTGCTGGTGTGTaGCCTCCCTCCATGACTGCATGCAGCGCAGCATCG | + |
|
Preference number: 3 (lower is better) Translates to: RPGFSLLPSAGV*PPSMTACSAAS Trigger: CGATGCTGCGCTGCATGCAGTCATGGAGGGAGGCCACACACCAGCAGATGGCAGAAGGGAGAAGCCAGGCCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084497.12 ENSMUST00000129552.2 |
||
| 3UTR CCA 72 bp | CAGACTCAGGCCTGGCTTCTCCCTTCTGCCATCTGCTaGTGTGTGGCCTCCCTCCATGACTGCATGCAGCGC | + |
|
Preference number: 3 (lower is better) Translates to: QTQAWLLPSAIC*CVASLHDCMQR Trigger: GCGCTGCATGCAGTCATGGAGGGAGGCCACACACCAGCAGATGGCAGAAGGGAGAAGCCAGGCCTGAGTCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084497.12 ENSMUST00000129552.2 |
||
| 3UTR GCA 72 bp | TCTGCCATCTGCTGGTGTGTGGCCTCCCTCCATGACTaGATGCAGCGCAGCATCGCTGGCGTGCACCAAAAG | + |
|
Preference number: 3 (lower is better) Translates to: SAICWCVASLHD*MQRSIAGVHQK Trigger: CTTTTGGTGCACGCCAGCGATGCTGCGCTGCATGCAGTCATGGAGGGAGGCCACACACCAGCAGATGGCAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084497.12 ENSMUST00000129552.2 |
||
| 3UTR GCA 72 bp | CCATCTGCTGGTGTGTGGCCTCCCTCCATGACTGCATaGAGCGCAGCATCGCTGGCGTGCACCAAAAGACAA | + |
|
Preference number: 3 (lower is better) Translates to: PSAGVWPPSMTA*SAASLACTKRQ Trigger: TTGTCTTTTGGTGCACGCCAGCGATGCTGCGCTGCATGCAGTCATGGAGGGAGGCCACACACCAGCAGATGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084497.12 ENSMUST00000129552.2 |
||
| 3UTR TCA 72 bp | CATAGCTGGAAGAGCCCACAGCCTGAGGACGGGGCATaGAGACACTCCTTTCCATGCGAGAATGGCTCAGAG | + |
|
Preference number: 3 (lower is better) Translates to: HSWKSPQPEDGA*RHSFPCENGSE Trigger: CTCTGAGCCATTCTCGCATGGAAAGGAGTGTCTTCATGCCCCGTCCTCAGGCTGTGGGCTCTTCCAGCTATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129552.2 |
||
| 3UTR CCA 72 bp | ACTGTGTCTGGGATCTGTTCACTACAGACTCAGGCCTaGCTTCTCCCTTCTGCCATCTGCTGGTGTGTGGCC | + |
|
Preference number: 3 (lower is better) Translates to: TVSGICSLQTQA*LLPSAICWCVA Trigger: GGCCACACACCAGCAGATGGCAGAAGGGAGAAGCCAGGCCTGAGTCTGTAGTGAACAGATCCCAGACACAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084497.12 ENSMUST00000129552.2 |
||
| 3UTR TCA 72 bp | TGTGCACAGGATGCTCCACTCAGGAGCCGCGGCATCTaGGAAAGCAGGTCTCCCCACAGATTAAGTCCTCAA | + |
|
Preference number: 3 (lower is better) Translates to: CAQDAPLRSRGI*ESRSPHRLSPQ Trigger: TTGAGGACTTAATCTGTGGGGAGACCTGCTTTCTCAGATGCCGCGGCTCCTGAGTGGAGCATCCTGTGCACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084497.12 ENSMUST00000129552.2 |
||
| 3UTR TCA 72 bp | CACTCTGGGAAGGAAGAAGATCTGCTCCACTTCCAGTaGACTTCAGTCCGCCACTGGTGGAAGCATAGCTGG | + |
|
Preference number: 3 (lower is better) Translates to: HSGKEEDLLHFQ*TSVRHWWKHSW Trigger: CCAGCTATGCTTCCACCAGTGGCGGACTGAAGTTCACTGGAAGTGGAGCAGATCTTCTTCCTTCCCAGAGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129552.2 |
||
| 3UTR GCA 72 bp | ACTGTCTCCAGCTGCACTCTGGGAAGGAAGAAGATCTaGTCCACTTCCAGTGAACTTCAGTCCGCCACTGGT | + |
|
Preference number: 3 (lower is better) Translates to: TVSSCTLGRKKI*STSSELQSATG Trigger: ACCAGTGGCGGACTGAAGTTCACTGGAAGTGGAGCAGATCTTCTTCCTTCCCAGAGTGCAGCTGGAGACAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129552.2 |
||
| 3UTR-3UTR CAA 90 bp | TTCCCTGTAGGACATCTGCTGCTGGGTGTTTCGCCGGAACCTGTACCATCCGATAACTCTGAGACGTGTTaGGCACTGAAGACACTTTGT | + |
|
Preference number: 3 (lower is better) Translates to: FPVGHLLLGVSPEPVPSDNSETC*ALKTLC Trigger: ACAAAGTGTCTTCAGTGCCAAACACGTCTCAGAGTT...ATCGGATGGTACAGGTTCCGGCGAAACACCCAGCAGCAGATGTCCTACAGGGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147786.9 |
||
| 3UTR-3UTR CAA 90 bp | GAGGATGCGGGTGAGCTGCTTGTGGATGACCTGTTCCCTGTAGGACATCTGCTGCTAGTATTGCCTAGATaGGGAATAGCAAGTGATATC | + |
|
Preference number: 3 (lower is better) Translates to: EDAGELLVDDLFPVGHLLLVLPR*GIASDI Trigger: GATATCACTTGCTATTCCCAATCTAGGCAATACTAG...CAGCAGATGTCCTACAGGGAACAGGTCATCCACAAGCAGCTCACCCGCATCCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147786.9 |
||
| 3UTR CCA 72 bp | ATTTGTTTACTTAAATCTGGGAGGTCTGAGTGTTCCTaGGGTCCTCGTCAGGATGTGTCGAGGGCCGTGAAT | + |
|
Preference number: 3 (lower is better) Translates to: ICLLKSGRSECS*GPRQDVSRAVN Trigger: ATTCACGGCCCTCGACACATCCTGACGAGGACCCCAGGAACACTCAGACCTCCCAGATTTAAGTAAACAAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129552.2 |
||
| 3UTR TCA 72 bp | AGGAAGGCAGTTCAGCGCCAAGCATCATGGGCTGATTaGTTGCCATATATGGTAGGTCTTGCCACTTCCAAT | + |
|
Preference number: 3 (lower is better) Translates to: RKAVQRQASWAD*LPYMVGLATSN Trigger: ATTGGAAGTGGCAAGACCTACCATATATGGCAATCAATCAGCCCATGATGCTTGGCGCTGAACTGCCTTCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084497.12 ENSMUST00000129552.2 |
||
| 3UTR CCA 72 bp | CATGCGAGAATGGCTCAGAGTACTTTCTTGATTGTTTaGGTGGAAATCAGAGTAAGGGGGCGGAGGATCAGA | + |
|
Preference number: 3 (lower is better) Translates to: HARMAQSTFLIV*VEIRVRGRRIR Trigger: TCTGATCCTCCGCCCCCTTACTCTGATTTCCACCCAAACAATCAAGAAAGTACTCTGAGCCATTCTCGCATG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000129552.2 |
||
| 3UTR-3UTR CAA 90 bp | AAATCCACTGTGTCTGGGATCTGTTCACTACAGACTCAGGCCTGGCTTCTCCCTAGGGCCGTGAATTCTTaGAATGTGAGTATTCGCTAT | + |
|
Preference number: 3 (lower is better) Translates to: KSTVSGICSLQTQAWLLPRAVNS*NVSIRY Trigger: ATAGCGAATACTCACATTCAAAGAATTCACGGCCCT...AGGGAGAAGCCAGGCCTGAGTCTGTAGTGAACAGATCCCAGACACAGTGGATTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129552.2 |
||
| 3UTR-3UTR CAA 90 bp | ACCAGGATAGCAGTTACAATGCAGACCCTGGGGCACAATCAAAGCAGGACGGTCATCATAGAAAGTTCTTaGAAGGCTGCTGCTAAATTC | + |
|
Preference number: 3 (lower is better) Translates to: TRIAVTMQTLGHNQSRTVIIESS*KAAAKF Trigger: GAATTTAGCAGCAGCCTTCAAAGAACTTTCTATGAT...GACCGTCCTGCTTTGATTGTGCCCCAGGGTCTGCATTGTAACTGCTATCCTGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084497.12 ENSMUST00000129552.2 |
||
| 3UTR-3UTR CAA 90 bp | TGGCATAACTCTGAGACGTGTTTGGCACTGAAGACACTTTGTACTCTTGCTGGCAACTCTGAGACGTGTTaGGCACTGAAGACACTTTGT | + |
|
Preference number: 3 (lower is better) Translates to: WHNSETCLALKTLCTLAGNSETC*ALKTLC Trigger: ACAAAGTGTCTTCAGTGCCAAACACGTCTCAGAGTT...GCCAGCAAGAGTACAAAGTGTCTTCAGTGCCAAACACGTCTCAGAGTTATGCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000134784.2 ENSMUST00000147786.9 |
||
| 3UTR-3UTR CAA 90 bp | TACATCTGCACATACTGCCTGTACTTTCTCCTGAAGTGCATTATAAACCTGATAATGCGGGTGAGCTGCTaGTGGATGACCTGTTCCCTG | + |
|
Preference number: 3 (lower is better) Translates to: YICTYCLYFLLKCIINLIMRVSC*WMTCSL Trigger: CAGGGAACAGGTCATCCACAAGCAGCTCACCCGCAT...TATCAGGTTTATAATGCACTTCAGGAGAAAGTACAGGCAGTATGTGCAGATGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147786.9 |
||
| 3UTR TCA 72 bp | AATGACCTTGGCATAACTCTGAGACGTGTTTGGCACTaGAGACACTTTGTACTCTTGCTGGCTAGTATTGCC | + |
|
Preference number: 3 (lower is better) Translates to: NDLGITLRRVWH*RHFVLLLASIA Trigger: GGCAATACTAGCCAGCAAGAGTACAAAGTGTCTTCAGTGCCAAACACGTCTCAGAGTTATGCCAAGGTCATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000134784.2 ENSMUST00000147786.9 |
||
| 3UTR CCA 72 bp | GACGTGTTTGGCACTGAAGACACTTTGTACTCTTGCTaGCTAGTATTGCCTAGATTGGGAATAGCAAGTGAT | + |
|
Preference number: 3 (lower is better) Translates to: DVFGTEDTLYSC*LVLPRLGIASD Trigger: ATCACTTGCTATTCCCAATCTAGGCAATACTAGCCAGCAAGAGTACAAAGTGTCTTCAGTGCCAAACACGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000134784.2 ENSMUST00000147786.9 |
||
| 3UTR-3UTR CAA 90 bp | TTGTCTTCTCAATTTGTTCACTTCTGCCTGACAAGATTCAACAACTCGCTCACTGGCACTGAAGACACTTaGTACTCTTGCTGGCTAGTA | + |
|
Preference number: 3 (lower is better) Translates to: LSSQFVHFCLTRFNNSLTGTEDT*YSCWLV Trigger: TACTAGCCAGCAAGAGTACAAAGTGTCTTCAGTGCC...AGTGAGCGAGTTGTTGAATCTTGTCAGGCAGAAGTGAACAAATTGAGAAGACAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147786.9 |
||
| 3UTR-3UTR CAA 90 bp | CTGAAGTGCATTATAAACCTGATAAATTGCCCTGATGTCCTTCATGACTCCATCAACTCTGAGACGTGTTaGGCACTGAAGACACTTTGT | + |
|
Preference number: 3 (lower is better) Translates to: LKCIINLINCPDVLHDSINSETC*ALKTLC Trigger: ACAAAGTGTCTTCAGTGCCAAACACGTCTCAGAGTT...GATGGAGTCATGAAGGACATCAGGGCAATTTATCAGGTTTATAATGCACTTCAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000129552.2 ENSMUST00000134784.2 ENSMUST00000147786.9 |
||
| 3UTR-3UTR CAA 90 bp | TTTCTCCTGAAGTGCATTATAAACCTGATAAATTGCCCTGATGTCCTTCATGACGGCACTGAAGACACTTaGTACTCTTGCTGGCTAGTA | + |
|
Preference number: 3 (lower is better) Translates to: FLLKCIINLINCPDVLHDGTEDT*YSCWLV Trigger: TACTAGCCAGCAAGAGTACAAAGTGTCTTCAGTGCC...GTCATGAAGGACATCAGGGCAATTTATCAGGTTTATAATGCACTTCAGGAGAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000134784.2 ENSMUST00000147786.9 |
||
| 3UTR TCA 72 bp | GTCTCTGATCTGATTTATCTTAAGAACAGACTACACTaGGGGGTCACTCTGCCTAAATTCACTAGTACATCC | + |
|
Preference number: 3 (lower is better) Translates to: VSDLIYLKNRLH*GVTLPKFTSTS Trigger: GGATGTACTAGTGAATTTAGGCAGAGTGACCCCTCAGTGTAGTCTGTTCTTAAGATAAATCAGATCAGAGAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000084497.12 ENSMUST00000129552.2 |
||
| 3UTR-3UTR CAA 90 bp | TTTCTCCTGAAGTGCATTATAAACCTGATAAATTGCCCTGATGTCCTTCATGACTCTTGCTGGCTAGTATaGCCTAGATTGGGAATAGCA | + |
|
Preference number: 3 (lower is better) Translates to: FLLKCIINLINCPDVLHDSCWLV*PRLGIA Trigger: TGCTATTCCCAATCTAGGCAATACTAGCCAGCAAGA...GTCATGAAGGACATCAGGGCAATTTATCAGGTTTATAATGCACTTCAGGAGAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000134784.2 ENSMUST00000147786.9 |
||
| 3UTR GCA 72 bp | TACATCTGCACATACTGCCTGTACTTTCTCCTGAAGTaGATTATAAACCTGATAAATTGCCCTGATGTCCTT | + |
|
Preference number: 3 (lower is better) Translates to: YICTYCLYFLLK*IINLINCPDVL Trigger: AAGGACATCAGGGCAATTTATCAGGTTTATAATGCACTTCAGGAGAAAGTACAGGCAGTATGTGCAGATGTA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129552.2 ENSMUST00000147786.9 |
||
| 3UTR-3UTR CAA 90 bp | CTGTACTTTCTCCTGAAGTGCATTATAAACCTGATAAATTGCCCTGATGTCCTTCTAGTATTGCCTAGATaGGGAATAGCAAGTGATATC | + |
|
Preference number: 3 (lower is better) Translates to: LYFLLKCIINLINCPDVLLVLPR*GIASDI Trigger: GATATCACTTGCTATTCCCAATCTAGGCAATACTAG...AAGGACATCAGGGCAATTTATCAGGTTTATAATGCACTTCAGGAGAAAGTACAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000134784.2 ENSMUST00000147786.9 |
||
| 3UTR GCA 72 bp | TACTTTCTCCTGAAGTGCATTATAAACCTGATAAATTaGCCTGATGTCCTTCATGACTCCATCCTTGTCAAA | + |
|
Preference number: 3 (lower is better) Translates to: YFLLKCIINLIN*PDVLHDSILVK Trigger: TTTGACAAGGATGGAGTCATGAAGGACATCAGGGCAATTTATCAGGTTTATAATGCACTTCAGGAGAAAGTA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000129552.2 ENSMUST00000134784.2 ENSMUST00000147786.9 |
||
| 3UTR TCA 72 bp | GTATTGCCTAGATTGGGAATAGCAAGTGATATCCTTTaGTTATACCTGCGGTTTGGTCTAAAGAGAACATAT | + |
|
Preference number: 3 (lower is better) Translates to: VLPRLGIASDIL*LYLRFGLKRTY Trigger: ATATGTTCTCTTTAGACCAAACCGCAGGTATAATCAAAGGATATCACTTGCTATTCCCAATCTAGGCAATAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147786.9 |
||
| CDS-3UTR CCA 90 bp | CCCACAGTGAACCCTGTGCTCAGGCACAGTCTCCCCACAGTGAACCCTGTGCTCAAGGAAGACCAGGTCTaGCACGCCGAGGATGCGGGT | + |
|
Preference number: 4 (lower is better) Translates to: PTVNPVLRHSLPTVNPVLKEDQV*HAEDAG Trigger: ACCCGCATCCTCGGCGTGCCAGACCTGGTCTTCCTT...GAGCACAGGGTTCACTGTGGGGAGACTGTGCCTGAGCACAGGGTTCACTGTGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106161.8 |
||
| CDS-3UTR TCA 90 bp | GGGGTGGAGTGCAGGTTAGTGGTGGAGCACGTGCTTAGCCTGGGAACCCTGTGCGGAAACACACAGCGCTaGAGGTGTAGCCCGAAATGG | + |
|
Preference number: 4 (lower is better) Translates to: GVECRLVVEHVLSLGTLCGNTQR*RCSPKW Trigger: CCATTTCGGGCTACACCTTCAGCGCTGTGTGTTTCC...GCACAGGGTTCCCAGGCTAAGCACGTGCTCCACCACTAACCTGCACTCCACCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106161.8 |
||
| CDS-3UTR TCA 90 bp | CACAGTGAACCCTGTGCTCAGGCACAGTCTCCCCACAGTGAACCCTGTGCTCAGGCCAGTCTCTCATACTaGATGGGAGACCGCGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: HSEPCAQAQSPHSEPCAQASLSY*MGDRAP Trigger: TGGAGCGCGGTCTCCCATTCAGTATGAGAGACTGGC...CTGAGCACAGGGTTCACTGTGGGGAGACTGTGCCTGAGCACAGGGTTCACTGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106161.8 |
||
| CDS-3UTR TCA 90 bp | AGGCCTGGCTTCTCCCTTCTGCCATCTGCTGGTGTGTGGCCTCCCTCCATGACTAAATGGAAGCCGCCATaGTGGAAATCTCCACCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: RPGFSLLPSAGVWPPSMTKWKPP*WKSPPP Trigger: GGGAGGTGGAGATTTCCATCATGGCGGCTTCCATTT...AGTCATGGAGGGAGGCCACACACCAGCAGATGGCAGAAGGGAGAAGCCAGGCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084497.12 |
||
| CDS-3UTR GCA 90 bp | AGGTTAGTGGTGGAGCACGTGCTTAGCCTGGGAACCCTGTGCTCAGGCACAGTCAGGATGCGGGTGAGCTaGTTGTGGATGACCTGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: RLVVEHVLSLGTLCSGTVRMRVS*LWMTCS Trigger: GGAACAGGTCATCCACAAGCAGCTCACCCGCATCCT...GACTGTGCCTGAGCACAGGGTTCCCAGGCTAAGCACGTGCTCCACCACTAACCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106161.8 |
||
| CDS-3UTR TCA 90 bp | CTGTGTCTGGGATCTGTTCACTACAGACTCAGGCCTGGCTTCTCCCTTCTGCCACCTGAGGACGGGGCATaGAGACACTCCTTTCCATGC | + |
|
Preference number: 4 (lower is better) Translates to: LCLGSVHYRLRPGFSLLPPEDGA*RHSFPC Trigger: GCATGGAAAGGAGTGTCTTCATGCCCCGTCCTCAGG...TGGCAGAAGGGAGAAGCCAGGCCTGAGTCTGTAGTGAACAGATCCCAGACACAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084497.12 |
||
| CDS-3UTR GCA 90 bp | CCCACAGTGAACCCTGTGCTCAGGCACAGTCTCCCCACAGTGAACCCTGTGCTCAGACCGCGCTCCAGGTaGTTACTTCTTTCTTGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: PTVNPVLRHSLPTVNPVLRPRSR*LLLSCS Trigger: GGAACAAGAAAGAAGTAAGCACCTGGAGCGCGGTCT...GAGCACAGGGTTCACTGTGGGGAGACTGTGCCTGAGCACAGGGTTCACTGTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106161.8 |
||
| CDS-3UTR CCA 90 bp | CACAGTGAACCCTGTGCTCAGGCACAGTCTCCCCACAGTGAACCCTGTGCTCAGTTGCTGTTGGCGCTGTaGAAACACACAGCGCTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: HSEPCAQAQSPHSEPCAQLLLAL*KHTALK Trigger: CTTCAGCGCTGTGTGTTTCCACAGCGCCAACAGCAA...CTGAGCACAGGGTTCACTGTGGGGAGACTGTGCCTGAGCACAGGGTTCACTGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106161.8 |
||
| CDS-3UTR CCA 90 bp | AACCCTGTGCTCAGGCACAGTCTCCCCACAGTGAACCCTGTGCTCAGGCACAGTAGCAAAAATCCTTCGTaGTCGGCGTTGCTGTTGGCG | + |
|
Preference number: 4 (lower is better) Translates to: NPVLRHSLPTVNPVLRHSSKNPS*SALLLA Trigger: CGCCAACAGCAACGCCGACCACGAAGGATTTTTGCT...ACTGTGCCTGAGCACAGGGTTCACTGTGGGGAGACTGTGCCTGAGCACAGGGTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000106161.8 |
||
| CDS-3UTR TCA 90 bp | CTGTGTCTGGGATCTGTTCACTACAGACTCAGGCCTGGCTTCTCCCTTCTGCCAGGAAACACACAGCGCTaGAGGTGTAGCCCGAAATGG | + |
|
Preference number: 4 (lower is better) Translates to: LCLGSVHYRLRPGFSLLPGNTQR*RCSPKW Trigger: CCATTTCGGGCTACACCTTCAGCGCTGTGTGTTTCC...TGGCAGAAGGGAGAAGCCAGGCCTGAGTCTGTAGTGAACAGATCCCAGACACAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084497.12 ENSMUST00000129552.2 |
||
| CDS-3UTR TCA 90 bp | AAATCCACTGTGTCTGGGATCTGTTCACTACAGACTCAGGCCTGGCTTCTCCCTGAAGAGCCCACAGCCTaGGGACGGGGCATGAAGACA | + |
|
Preference number: 4 (lower is better) Translates to: KSTVSGICSLQTQAWLLPEEPTA*GRGMKT Trigger: TGTCTTCATGCCCCGTCCTCAGGCTGTGGGCTCTTC...AGGGAGAAGCCAGGCCTGAGTCTGTAGTGAACAGATCCCAGACACAGTGGATTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084497.12 |
||
| CDS-3UTR TCA 90 bp | ACCAGGATAGCAGTTACAATGCAGACCCTGGGGCACAATCAAAGCAGGACGGTCCTGCTCCACTTCCAGTaGACTTCAGTCCGCCACTGG | + |
|
Preference number: 4 (lower is better) Translates to: TRIAVTMQTLGHNQSRTVLLHFQ*TSVRHW Trigger: CCAGTGGCGGACTGAAGTTCACTGGAAGTGGAGCAG...GACCGTCCTGCTTTGATTGTGCCCCAGGGTCTGCATTGTAACTGCTATCCTGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084497.12 |
||
| CDS-3UTR GCA 90 bp | CTGTGTCTGGGATCTGTTCACTACAGACTCAGGCCTGGCTTCTCCCTTCTGCCACGGATGGCATCTGTCTaGTTAACAGGGCCTGCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: LCLGSVHYRLRPGFSLLPRMASV*LTGPAA Trigger: TGCAGCAGGCCCTGTTAAGCAGACAGATGCCATCCG...TGGCAGAAGGGAGAAGCCAGGCCTGAGTCTGTAGTGAACAGATCCCAGACACAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084497.12 |
||
| CDS-3UTR GCA 90 bp | AGGCCTGGCTTCTCCCTTCTGCCATCTGCTGGTGTGTGGCCTCCCTCCATGACTAGACACTCCTTTCCATaGGAGAATGGCTCAGAGTAC | + |
|
Preference number: 4 (lower is better) Translates to: RPGFSLLPSAGVWPPSMTRHSFP*ENGSEY Trigger: GTACTCTGAGCCATTCTCGCATGGAAAGGAGTGTCT...AGTCATGGAGGGAGGCCACACACCAGCAGATGGCAGAAGGGAGAAGCCAGGCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084497.12 |
||
| CDS-3UTR GCA 90 bp | GGAAGTGGTGTGAGCCCAGAAAACCAGGATAGCAGTTACAATGCAGACCCTGGGAGGATGCGGGTGAGCTaGTTGTGGATGACCTGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: GSGVSPENQDSSYNADPGRMRVS*LWMTCS Trigger: GGAACAGGTCATCCACAAGCAGCTCACCCGCATCCT...CCCAGGGTCTGCATTGTAACTGCTATCCTGGTTTTCTGGGCTCACACCACTTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084497.12 ENSMUST00000129552.2 |
||
| CDS-3UTR GCA 90 bp | AGGCCTGGCTTCTCCCTTCTGCCATCTGCTGGTGTGTGGCCTCCCTCCATGACTCTGCTTAACAGGGCCTaGTGCAATCTTCTTTCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: RPGFSLLPSAGVWPPSMTLLNRA*CNLLSC Trigger: ACAAGAAAGAAGATTGCAGCAGGCCCTGTTAAGCAG...AGTCATGGAGGGAGGCCACACACCAGCAGATGGCAGAAGGGAGAAGCCAGGCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084497.12 |
||
| CDS-3UTR CCA 90 bp | TTCCCTGTAGGACATCTGCTGCTGGGTGTTTCGCCGGAACCTGTACCATCCGATAGCAAAAATCCTTCGTaGTCGGCGTTGCTGTTGGCG | + |
|
Preference number: 4 (lower is better) Translates to: FPVGHLLLGVSPEPVPSDSKNPS*SALLLA Trigger: CGCCAACAGCAACGCCGACCACGAAGGATTTTTGCT...ATCGGATGGTACAGGTTCCGGCGAAACACCCAGCAGCAGATGTCCTACAGGGAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000147786.9 |
||
| CDS-3UTR TCA 90 bp | CACAGTGAACCCTGTGCTCAGGCACAGTCTCCCCACAGTGAACCCTGTGCTCAGAGACGTGTTTGGCACTaGAGACACTTTGTACTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: HSEPCAQAQSPHSEPCAQRRVWH*RHFVLL Trigger: CAAGAGTACAAAGTGTCTTCAGTGCCAAACACGTCT...CTGAGCACAGGGTTCACTGTGGGGAGACTGTGCCTGAGCACAGGGTTCACTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106161.8 |
||
| CDS-3UTR TCA 90 bp | AACCCTGTGCTCAGGCACAGTCTCCCCACAGTGAACCCTGTGCTCAGGCACAGTTTGTTCACTTCTGCCTaGCAAGATTCAACAACTCGC | + |
|
Preference number: 4 (lower is better) Translates to: NPVLRHSLPTVNPVLRHSLFTSA*QDSTTR Trigger: GCGAGTTGTTGAATCTTGTCAGGCAGAAGTGAACAA...ACTGTGCCTGAGCACAGGGTTCACTGTGGGGAGACTGTGCCTGAGCACAGGGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106161.8 |
||
| CDS-3UTR GCA 90 bp | CCCACAGTGAACCCTGTGCTCAGGCACAGTCTCCCCACAGTGAACCCTGTGCTCTACATCTGCACATACTaGCTGTACTTTCTCCTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: PTVNPVLRHSLPTVNPVLYICTY*LYFLLK Trigger: CTTCAGGAGAAAGTACAGGCAGTATGTGCAGATGTA...GAGCACAGGGTTCACTGTGGGGAGACTGTGCCTGAGCACAGGGTTCACTGTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106161.8 |
||
| CDS-3UTR CCA 90 bp | AGGATAGCAGTTACAATGCAGACCCTGGGGCACAATCAAAGCAGGACGGTCAGCAGCAAAAATCCTTCGTaGTCGGCGTTGCTGTTGGCG | + |
|
Preference number: 4 (lower is better) Translates to: RIAVTMQTLGHNQSRTVSSKNPS*SALLLA Trigger: CGCCAACAGCAACGCCGACCACGAAGGATTTTTGCT...GCTGACCGTCCTGCTTTGATTGTGCCCCAGGGTCTGCATTGTAACTGCTATCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000084497.12 ENSMUST00000129552.2 |
||
| 3UTR CAA 72 bp | GGTCCTCGTCAGGATGTGTCGAGGGCCGTGAATTCTTaGAATGTGAGTATTCGCTATGAGGGGACTCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: GPRQDVSRAVNS*NVSIRYEGTLQ Trigger: CTGCAGAGTCCCCTCATAGCGAATACTCACATTCAAAGAATTCACGGCCCTCGACACATCCTGACGAGGACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129552.2 |
||
| CDS-3UTR TCA 90 bp | AGGCCTGGCTTCTCCCTTCTGCCATCTGCTGGTGTGTGGCCTCCCTCCATGACTAAAACTGAAGAGTTGTaGACAAGGCTGATGGTTATG | + |
|
Preference number: 4 (lower is better) Translates to: RPGFSLLPSAGVWPPSMTKTEEL*TRLMVM Trigger: CATAACCATCAGCCTTGTTCACAACTCTTCAGTTTT...AGTCATGGAGGGAGGCCACACACCAGCAGATGGCAGAAGGGAGAAGCCAGGCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084497.12 ENSMUST00000129552.2 |
||
| CDS-3UTR TCA 90 bp | CCCACAGTGAACCCTGTGCTCAGGCACAGTCTCCCCACAGTGAACCCTGTGCTCAAAACTGAAGAGTTGTaGACAAGGCTGATGGTTATG | + |
|
Preference number: 4 (lower is better) Translates to: PTVNPVLRHSLPTVNPVLKTEEL*TRLMVM Trigger: CATAACCATCAGCCTTGTTCACAACTCTTCAGTTTT...GAGCACAGGGTTCACTGTGGGGAGACTGTGCCTGAGCACAGGGTTCACTGTGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106161.8 |
||
| CDS-3UTR TCA 90 bp | GGGGTGGAGTGCAGGTTAGTGGTGGAGCACGTGCTTAGCCTGGGAACCCTGTGCACATATTCTAAAGCATaGGTAGAATTGTTGGCGGTA | + |
|
Preference number: 4 (lower is better) Translates to: GVECRLVVEHVLSLGTLCTYSKA*VELLAV Trigger: TACCGCCAACAATTCTACTCATGCTTTAGAATATGT...GCACAGGGTTCCCAGGCTAAGCACGTGCTCCACCACTAACCTGCACTCCACCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106161.8 |
||
| CDS-3UTR GCA 90 bp | GGGGTGGAGTGCAGGTTAGTGGTGGAGCACGTGCTTAGCCTGGGAACCCTGTGCACTCTTTTCTACATCTaGACATACTGCCTGTACTTT | + |
|
Preference number: 4 (lower is better) Translates to: GVECRLVVEHVLSLGTLCTLFYI*TYCLYF Trigger: AAAGTACAGGCAGTATGTGCAGATGTAGAAAAGAGT...GCACAGGGTTCCCAGGCTAAGCACGTGCTCCACCACTAACCTGCACTCCACCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106161.8 |
||
| CDS-3UTR GCA 90 bp | GGGGTGGAGTGCAGGTTAGTGGTGGAGCACGTGCTTAGCCTGGGAACCCTGTGCCAATTTGTTCACTTCTaGCTGACAAGATTCAACAAC | + |
|
Preference number: 4 (lower is better) Translates to: GVECRLVVEHVLSLGTLCQFVHF*LTRFNN Trigger: GTTGTTGAATCTTGTCAGGCAGAAGTGAACAAATTG...GCACAGGGTTCCCAGGCTAAGCACGTGCTCCACCACTAACCTGCACTCCACCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106161.8 |
||
| CDS-3UTR CCA 90 bp | ATCTGCTGCTGGGTGTTTCGCCGGAACCTGTACCATCCGATAACTTTCTTCCTCTTGCTGTTGGCGCTGTaGAAACACACAGCGCTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: ICCWVFRRNLYHPITFFLLLLAL*KHTALK Trigger: CTTCAGCGCTGTGTGTTTCCACAGCGCCAACAGCAA...GAGGAAGAAAGTTATCGGATGGTACAGGTTCCGGCGAAACACCCAGCAGCAGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147786.9 |
||
| CDS-3UTR TCA 90 bp | AGGTTAGTGGTGGAGCACGTGCTTAGCCTGGGAACCCTGTGCTCAGGCACAGTCAGTTGTGAACAAGGCTaGTGGTTATGGATCTCAATT | + |
|
Preference number: 4 (lower is better) Translates to: RLVVEHVLSLGTLCSGTVSCEQG*WLWISI Trigger: AATTGAGATCCATAACCATCAGCCTTGTTCACAACT...GACTGTGCCTGAGCACAGGGTTCCCAGGCTAAGCACGTGCTCCACCACTAACCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106161.8 |
||
| CDS-3UTR GCA 90 bp | AGGTTAGTGGTGGAGCACGTGCTTAGCCTGGGAACCCTGTGCTCAGGCACAGTCTGGATCTCAATTACTTaGAGAAACTCTGTGTTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: RLVVEHVLSLGTLCSGTVWISIT*RNSVLL Trigger: CAGCAACACAGAGTTTCTGCAAGTAATTGAGATCCA...GACTGTGCCTGAGCACAGGGTTCCCAGGCTAAGCACGTGCTCCACCACTAACCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106161.8 |
||
| CDS-3UTR GCA 90 bp | AGGTTAGTGGTGGAGCACGTGCTTAGCCTGGGAACCCTGTGCTCAGGCACAGTCAAAAAGTCAGTACCGTaGTCTTTAATGACCTTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: RLVVEHVLSLGTLCSGTVKKSVP*SLMTLA Trigger: TGCCAAGGTCATTAAAGAGCACGGTACTGACTTTTT...GACTGTGCCTGAGCACAGGGTTCCCAGGCTAAGCACGTGCTCCACCACTAACCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106161.8 |
||
| CDS-3UTR GCA 90 bp | AAAACGTCTTTCCTCCACAACTCTAGCCCAGGATCCGCCACACCTAAGTACATTCCCACTGTCTCCAGCTaGACTCTGGGAAGGAAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: KTSFLHNSSPGSATPKYIPTVSS*TLGRKK Trigger: CTTCTTCCTTCCCAGAGTGCAGCTGGAGACAGTGGG...AATGTACTTAGGTGTGGCGGATCCTGGGCTAGAGTTGTGGAGGAAAGACGTTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084497.12 |
||
| CDS-3UTR CCA 90 bp | AGTGCATCCCAATGGTCTCCGCACATTTGCAATTATCCCCTAAATGGCAACTTTAAGGAAGACCAGGTCTaGCACGCCGAGGATGCGGGT | + |
|
Preference number: 4 (lower is better) Translates to: SASQWSPHICNYPLNGNFKEDQV*HAEDAG Trigger: ACCCGCATCCTCGGCGTGCCAGACCTGGTCTTCCTT...AAAGTTGCCATTTAGGGGATAATTGCAAATGTGCGGAGACCATTGGGATGCACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084497.12 ENSMUST00000129552.2 |
||
| CDS-3UTR CCA 90 bp | AAAGTCAGTACCGTGCTCTTTAATGACCTTGGCATAACTCTGAGACGTGTTTGGAAGGAAGACCAGGTCTaGCACGCCGAGGATGCGGGT | + |
|
Preference number: 4 (lower is better) Translates to: KVSTVLFNDLGITLRRVWKEDQV*HAEDAG Trigger: ACCCGCATCCTCGGCGTGCCAGACCTGGTCTTCCTT...CCAAACACGTCTCAGAGTTATGCCAAGGTCATTAAAGAGCACGGTACTGACTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129552.2 ENSMUST00000134784.2 |
||
| CDS-3UTR CCA 90 bp | GGGGTGGAGTGCAGGTTAGTGGTGGAGCACGTGCTTAGCCTGGGAACCCTGTGCATTATACCTGCGGTTTaGTCTAAAGAGAACATATTC | + |
|
Preference number: 4 (lower is better) Translates to: GVECRLVVEHVLSLGTLCIIPAV*SKENIF Trigger: GAATATGTTCTCTTTAGACCAAACCGCAGGTATAAT...GCACAGGGTTCCCAGGCTAAGCACGTGCTCCACCACTAACCTGCACTCCACCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106161.8 |
||
| CDS-3UTR CCA 90 bp | AACCCTGTGCTCAGGCACAGTCTCCCCACAGTGAACCCTGTGCTCAGGCACAGTACTTTGTACTCTTGCTaGCTAGTATTGCCTAGATTG | + |
|
Preference number: 4 (lower is better) Translates to: NPVLRHSLPTVNPVLRHSTLYSC*LVLPRL Trigger: CAATCTAGGCAATACTAGCCAGCAAGAGTACAAAGT...ACTGTGCCTGAGCACAGGGTTCACTGTGGGGAGACTGTGCCTGAGCACAGGGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106161.8 |
||
| CDS-3UTR CCA 90 bp | AAAACGTCTTTCCTCCACAACTCTAGCCCAGGATCCGCCACACCTAAGTACATTAGGTCTGAGTGTTCCTaGGGTCCTCGTCAGGATGTG | + |
|
Preference number: 4 (lower is better) Translates to: KTSFLHNSSPGSATPKYIRSECS*GPRQDV Trigger: CACATCCTGACGAGGACCCCAGGAACACTCAGACCT...AATGTACTTAGGTGTGGCGGATCCTGGGCTAGAGTTGTGGAGGAAAGACGTTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084497.12 |
||
| CDS-3UTR TCA 90 bp | AGGATAGCAGTTACAATGCAGACCCTGGGGCACAATCAAAGCAGGACGGTCAGCAGACGTGTTTGGCACTaGAGACACTTTGTACTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: RIAVTMQTLGHNQSRTVSRRVWH*RHFVLL Trigger: CAAGAGTACAAAGTGTCTTCAGTGCCAAACACGTCT...GCTGACCGTCCTGCTTTGATTGTGCCCCAGGGTCTGCATTGTAACTGCTATCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084497.12 |
||
| CDS-3UTR GCA 90 bp | AACCCTGTGCTCAGGCACAGTCTCCCCACAGTGAACCCTGTGCTCAGGCACAGTATAAACCTGATAAATTaGCCTGATGTCCTTCATGAC | + |
|
Preference number: 4 (lower is better) Translates to: NPVLRHSLPTVNPVLRHSINLIN*PDVLHD Trigger: GTCATGAAGGACATCAGGGCAATTTATCAGGTTTAT...ACTGTGCCTGAGCACAGGGTTCACTGTGGGGAGACTGTGCCTGAGCACAGGGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106161.8 |
||
| CDS-3UTR CCA 90 bp | CTCACTCTTTTCTACATCTGCACATACTGCCTGTACTTTCTCCTGAAGTGCATTAAGGAAGACCAGGTCTaGCACGCCGAGGATGCGGGT | + |
|
Preference number: 4 (lower is better) Translates to: LTLFYICTYCLYFLLKCIKEDQV*HAEDAG Trigger: ACCCGCATCCTCGGCGTGCCAGACCTGGTCTTCCTT...AATGCACTTCAGGAGAAAGTACAGGCAGTATGTGCAGATGTAGAAAAGAGTGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129552.2 |
||
| CDS-3UTR CCA 90 bp | TCTGGGAGTTCTGTGCACAGGATGCTCCACTCAGGAGCCGCGGCATCTGAGAAAACTTTGTACTCTTGCTaGCTAGTATTGCCTAGATTG | + |
|
Preference number: 4 (lower is better) Translates to: SGSSVHRMLHSGAAASEKTLYSC*LVLPRL Trigger: CAATCTAGGCAATACTAGCCAGCAAGAGTACAAAGT...TTTCTCAGATGCCGCGGCTCCTGAGTGGAGCATCCTGTGCACAGAACTCCCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084497.12 |
||
| 3UTR CAA 72 bp | CCATGCGAGAATGGCTCAGAGTACTTTCTTGATTGTTaGGGTGGAAATCAGAGTAAGGGGGCGGAGGATCAG | + |
|
Preference number: 4 (lower is better) Translates to: PCENGSEYFLDC*GGNQSKGAEDQ Trigger: CTGATCCTCCGCCCCCTTACTCTGATTTCCACCCAAACAATCAAGAAAGTACTCTGAGCCATTCTCGCATGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000129552.2 |
||
| CDS-3UTR TCA 90 bp | GGTGAGCTGCTTGTGGATGACCTGTTCCCTGTAGGACATCTGCTGCTGGGTGTTAAAACTGAAGAGTTGTaGACAAGGCTGATGGTTATG | + |
|
Preference number: 4 (lower is better) Translates to: GELLVDDLFPVGHLLLGVKTEEL*TRLMVM Trigger: CATAACCATCAGCCTTGTTCACAACTCTTCAGTTTT...AACACCCAGCAGCAGATGTCCTACAGGGAACAGGTCATCCACAAGCAGCTCACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147786.9 |
||
| CDS-3UTR CCA 90 bp | GAATGTCAAAATCTGAACAGAAGAGATGGCGATGGCACTTTAACAGACTGGACTGGTCGGCGTTGCTGTTaGCGCTGTGGAAACACACAG | + |
|
Preference number: 4 (lower is better) Translates to: ECQNLNRRDGDGTLTDWTGRRCC*RCGNTQ Trigger: CTGTGTGTTTCCACAGCGCCAACAGCAACGCCGACC...AGTCCAGTCTGTTAAAGTGCCATCGCCATCTCTTCTGTTCAGATTTTGACATTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084497.12 ENSMUST00000129552.2 |
||
| CDS-3UTR CCA 90 bp | AGTGCATCCCAATGGTCTCCGCACATTTGCAATTATCCCCTAAATGGCAACTTTTGGTGGAAGCATAGCTaGAAGAGCCCACAGCCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: SASQWSPHICNYPLNGNFWWKHS*KSPQPE Trigger: CTCAGGCTGTGGGCTCTTCCAGCTATGCTTCCACCA...AAAGTTGCCATTTAGGGGATAATTGCAAATGTGCGGAGACCATTGGGATGCACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084497.12 |
||
| CDS-3UTR CCA 90 bp | CTGTGTCTGGGATCTGTTCACTACAGACTCAGGCCTGGCTTCTCCCTTCTGCCAGTATTGCCTGCGGTTTaGTCTAAAGAGAACATATTC | + |
|
Preference number: 4 (lower is better) Translates to: LCLGSVHYRLRPGFSLLPVLPAV*SKENIF Trigger: GAATATGTTCTCTTTAGACCAAACCGCAGGCAATAC...TGGCAGAAGGGAGAAGCCAGGCCTGAGTCTGTAGTGAACAGATCCCAGACACAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129552.2 |
||
| 3UTR CAA 72 bp | ACTCCTTTCCATGCGAGAATGGCTCAGAGTACTTTCTaGATTGTTTGGGTGGAAATCAGAGTAAGGGGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: TPFHARMAQSTF*IVWVEIRVRGR Trigger: CCGCCCCCTTACTCTGATTTCCACCCAAACAATCAAGAAAGTACTCTGAGCCATTCTCGCATGGAAAGGAGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000129552.2 |
||
| CDS-3UTR GCA 90 bp | GGAAGTGGTGTGAGCCCAGAAAACCAGGATAGCAGTTACAATGCAGACCCTGGGTGGATCTCAATTACTTaGAGAAACTCTGTGTTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: GSGVSPENQDSSYNADPGWISIT*RNSVLL Trigger: CAGCAACACAGAGTTTCTGCAAGTAATTGAGATCCA...CCCAGGGTCTGCATTGTAACTGCTATCCTGGTTTTCTGGGCTCACACCACTTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084497.12 ENSMUST00000129552.2 |
||
| CDS-3UTR GCA 90 bp | TCCTCCACAACTCTAGCCCAGGATCCGCCACACCTAAGTACATTACATCCTTTCCTTAACAGGGCCTGCTaGAATCTTCTTTCTTGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: SSTTLAQDPPHLSTLHPFLNRAC*NLLSCS Trigger: GGAACAAGAAAGAAGATTGCAGCAGGCCCTGTTAAG...GAAAGGATGTAATGTACTTAGGTGTGGCGGATCCTGGGCTAGAGTTGTGGAGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084497.12 |
||
| CDS-3UTR TCA 90 bp | GGAAGTGGTGTGAGCCCAGAAAACCAGGATAGCAGTTACAATGCAGACCCTGGGACATATTCTAAAGCATaGGTAGAATTGTTGGCGGTA | + |
|
Preference number: 4 (lower is better) Translates to: GSGVSPENQDSSYNADPGTYSKA*VELLAV Trigger: TACCGCCAACAATTCTACTCATGCTTTAGAATATGT...CCCAGGGTCTGCATTGTAACTGCTATCCTGGTTTTCTGGGCTCACACCACTTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084497.12 ENSMUST00000129552.2 |
||
| CDS-3UTR CCA 90 bp | GAATGTCAAAATCTGAACAGAAGAGATGGCGATGGCACTTTAACAGACTGGACTTTGCTGTTGGCGCTGTaGAAACACACAGCGCTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: ECQNLNRRDGDGTLTDWTLLLAL*KHTALK Trigger: CTTCAGCGCTGTGTGTTTCCACAGCGCCAACAGCAA...AGTCCAGTCTGTTAAAGTGCCATCGCCATCTCTTCTGTTCAGATTTTGACATTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084497.12 ENSMUST00000129552.2 |
||
| CDS-3UTR CCA 90 bp | AGGATAGCAGTTACAATGCAGACCCTGGGGCACAATCAAAGCAGGACGGTCAGCACTTTCTTGATTGTTTaGGTGGAAATCAGAGTAAGG | + |
|
Preference number: 4 (lower is better) Translates to: RIAVTMQTLGHNQSRTVSTFLIV*VEIRVR Trigger: CCTTACTCTGATTTCCACCCAAACAATCAAGAAAGT...GCTGACCGTCCTGCTTTGATTGTGCCCCAGGGTCTGCATTGTAACTGCTATCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084497.12 |
||
| CDS-3UTR TCA 90 bp | TCGACATTCAAATCAAACGGAAGTGGTGTGAGCCCAGAAAACCAGGATAGCAGTACTTCTCCCTTCAGCTaGAAACCCAGAATAGGACAT | + |
|
Preference number: 4 (lower is better) Translates to: STFKSNGSGVSPENQDSSTSPFS*KPRIGH Trigger: ATGTCCTATTCTGGGTTTTCAGCTGAAGGGAGAAGT...ACTGCTATCCTGGTTTTCTGGGCTCACACCACTTCCGTTTGATTTGAATGTCGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084497.12 |
||
| CDS-3UTR GCA 90 bp | AAATCCACTGTGTCTGGGATCTGTTCACTACAGACTCAGGCCTGGCTTCTCCCTATAAACCTGATAAATTaGCCTGATGTCCTTCATGAC | + |
|
Preference number: 4 (lower is better) Translates to: KSTVSGICSLQTQAWLLPINLIN*PDVLHD Trigger: GTCATGAAGGACATCAGGGCAATTTATCAGGTTTAT...AGGGAGAAGCCAGGCCTGAGTCTGTAGTGAACAGATCCCAGACACAGTGGATTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084497.12 |
||
| CDS-3UTR CCA 90 bp | TGCATTATAAACCTGATAAATTGCCCTGATGTCCTTCATGACTCCATCCTTGTCAGCAAAAATCCTTCGTaGTCGGCGTTGCTGTTGGCG | + |
|
Preference number: 4 (lower is better) Translates to: CIINLINCPDVLHDSILVSKNPS*SALLLA Trigger: CGCCAACAGCAACGCCGACCACGAAGGATTTTTGCT...GACAAGGATGGAGTCATGAAGGACATCAGGGCAATTTATCAGGTTTATAATGCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000129552.2 ENSMUST00000134784.2 ENSMUST00000147786.9 |
||
| CDS-3UTR CCA 90 bp | AATAAAAGCGTAAGTGCATCCCAATGGTCTCCGCACATTTGCAATTATCCCCTATCTCCAGCTGCACTCTaGGAAGGAAGAAGATCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: NKSVSASQWSPHICNYPLSPAAL*EGRRSA Trigger: AGCAGATCTTCTTCCTTCCCAGAGTGCAGCTGGAGA...TAGGGGATAATTGCAAATGTGCGGAGACCATTGGGATGCACTTACGCTTTTATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084497.12 |
||
| CDS-3UTR TCA 90 bp | TACATCTGCACATACTGCCTGTACTTTCTCCTGAAGTGCATTATAAACCTGATAAAATGGAAGCCGCCATaGTGGAAATCTCCACCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: YICTYCLYFLLKCIINLIKWKPP*WKSPPP Trigger: GGGAGGTGGAGATTTCCATCATGGCGGCTTCCATTT...TATCAGGTTTATAATGCACTTCAGGAGAAAGTACAGGCAGTATGTGCAGATGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147786.9 |
||
| CDS-3UTR TCA 90 bp | TACTTTCTCCTGAAGTGCATTATAAACCTGATAAATTGCCCTGATGTCCTTCATGGAAACACACAGCGCTaGAGGTGTAGCCCGAAATGG | + |
|
Preference number: 4 (lower is better) Translates to: YFLLKCIINLINCPDVLHGNTQR*RCSPKW Trigger: CCATTTCGGGCTACACCTTCAGCGCTGTGTGTTTCC...ATGAAGGACATCAGGGCAATTTATCAGGTTTATAATGCACTTCAGGAGAAAGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129552.2 ENSMUST00000147786.9 |
||
| CDS-3UTR TCA 90 bp | AAAACGTCTTTCCTCCACAACTCTAGCCCAGGATCCGCCACACCTAAGTACATTCTCAGAGTACTTTCTTaGTTGTTTGGGTGGAAATCA | + |
|
Preference number: 4 (lower is better) Translates to: KTSFLHNSSPGSATPKYILRVLS*LFGWKS Trigger: TGATTTCCACCCAAACAATCAAGAAAGTACTCTGAG...AATGTACTTAGGTGTGGCGGATCCTGGGCTAGAGTTGTGGAGGAAAGACGTTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084497.12 |
||
| CDS-3UTR CCA 90 bp | CTGTACTTTCTCCTGAAGTGCATTATAAACCTGATAAATTGCCCTGATGTCCTTTTGCTGTTGGCGCTGTaGAAACACACAGCGCTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: LYFLLKCIINLINCPDVLLLLAL*KHTALK Trigger: CTTCAGCGCTGTGTGTTTCCACAGCGCCAACAGCAA...AAGGACATCAGGGCAATTTATCAGGTTTATAATGCACTTCAGGAGAAAGTACAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129552.2 ENSMUST00000147786.9 |
||
| CDS-3UTR CCA 90 bp | TACTGCCTGTACTTTCTCCTGAAGTGCATTATAAACCTGATAAATTGCCCTGATAGCAAAAATCCTTCGTaGTCGGCGTTGCTGTTGGCG | + |
|
Preference number: 4 (lower is better) Translates to: YCLYFLLKCIINLINCPDSKNPS*SALLLA Trigger: CGCCAACAGCAACGCCGACCACGAAGGATTTTTGCT...ATCAGGGCAATTTATCAGGTTTATAATGCACTTCAGGAGAAAGTACAGGCAGTA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000129552.2 ENSMUST00000147786.9 |
||
| CDS-3UTR CCA 90 bp | AAATCCACTGTGTCTGGGATCTGTTCACTACAGACTCAGGCCTGGCTTCTCCCTATTATACCTGCGGTTTaGTCTAAAGAGAACATATTC | + |
|
Preference number: 4 (lower is better) Translates to: KSTVSGICSLQTQAWLLPIIPAV*SKENIF Trigger: GAATATGTTCTCTTTAGACCAAACCGCAGGTATAAT...AGGGAGAAGCCAGGCCTGAGTCTGTAGTGAACAGATCCCAGACACAGTGGATTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084497.12 |
||
| CDS-3UTR TCA 90 bp | TCGACATTCAAATCAAACGGAAGTGGTGTGAGCCCAGAAAACCAGGATAGCAGTAGTTGTGAACAAGGCTaGTGGTTATGGATCTCAATT | + |
|
Preference number: 4 (lower is better) Translates to: STFKSNGSGVSPENQDSSSCEQG*WLWISI Trigger: AATTGAGATCCATAACCATCAGCCTTGTTCACAACT...ACTGCTATCCTGGTTTTCTGGGCTCACACCACTTCCGTTTGATTTGAATGTCGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084497.12 ENSMUST00000129552.2 |
||
| CDS-3UTR GCA 90 bp | AAATCTGAACAGAAGAGATGGCGATGGCACTTTAACAGACTGGACTTCATACCGTACATCTGCACATACTaGCTGTACTTTCTCCTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: KSEQKRWRWHFNRLDFIPYICTY*LYFLLK Trigger: CTTCAGGAGAAAGTACAGGCAGTATGTGCAGATGTA...CGGTATGAAGTCCAGTCTGTTAAAGTGCCATCGCCATCTCTTCTGTTCAGATTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084497.12 |
||
| CDS-3UTR CCA 90 bp | CAGATTAAGTCCTCAACAACACTCAATAAGCCATTAAGAAAAGTAGTGCCAAGTACTTCAGTCCGCCACTaGTGGAAGCATAGCTGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: QIKSSTTLNKPLRKVVPSTSVRH*WKHSWK Trigger: CTTCCAGCTATGCTTCCACCAGTGGCGGACTGAAGT...ACTTGGCACTACTTTTCTTAATGGCTTATTGAGTGTTGTTGAGGACTTAATCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084497.12 |
||
| CDS-3UTR TCA 90 bp | CAGATTAAGTCCTCAACAACACTCAATAAGCCATTAAGAAAAGTAGTGCCAAGTATAATCACTGTCATCTaGCTCCTCCCCACTGTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: QIKSSTTLNKPLRKVVPSIITVI*LLPTVS Trigger: GGAGACAGTGGGGAGGAGTCAGATGACAGTGATTAT...ACTTGGCACTACTTTTCTTAATGGCTTATTGAGTGTTGTTGAGGACTTAATCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084497.12 |
||
| CDS-3UTR TCA 90 bp | CTCACTCTTTTCTACATCTGCACATACTGCCTGTACTTTCTCCTGAAGTGCATTAGTTGTGAACAAGGCTaGTGGTTATGGATCTCAATT | + |
|
Preference number: 4 (lower is better) Translates to: LTLFYICTYCLYFLLKCISCEQG*WLWISI Trigger: AATTGAGATCCATAACCATCAGCCTTGTTCACAACT...AATGCACTTCAGGAGAAAGTACAGGCAGTATGTGCAGATGTAGAAAAGAGTGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129552.2 |
||
| CDS-3UTR TCA 90 bp | GTCTTCTCAATTTGTTCACTTCTGCCTGACAAGATTCAACAACTCGCTCACTCTAAAACTGAAGAGTTGTaGACAAGGCTGATGGTTATG | + |
|
Preference number: 4 (lower is better) Translates to: VFSICSLLPDKIQQLAHSKTEEL*TRLMVM Trigger: CATAACCATCAGCCTTGTTCACAACTCTTCAGTTTT...AGAGTGAGCGAGTTGTTGAATCTTGTCAGGCAGAAGTGAACAAATTGAGAAGAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129552.2 ENSMUST00000147786.9 |
||
| CDS-3UTR TCA 90 bp | TACTGCCTGTACTTTCTCCTGAAGTGCATTATAAACCTGATAAATTGCCCTGATAGTTGTGAACAAGGCTaGTGGTTATGGATCTCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: YCLYFLLKCIINLINCPDSCEQG*WLWISL Trigger: GAGAGAGATCCATAACCATCAGCCTTGTTCACAACT...ATCAGGGCAATTTATCAGGTTTATAATGCACTTCAGGAGAAAGTACAGGCAGTA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147786.9 |
||
| CDS-3UTR GCA 90 bp | GAATGTCAAAATCTGAACAGAAGAGATGGCGATGGCACTTTAACAGACTGGACTCAATTTGTTCACTTCTaGCTGACAAGATTCAACAAC | + |
|
Preference number: 4 (lower is better) Translates to: ECQNLNRRDGDGTLTDWTQFVHF*LTRFNN Trigger: GTTGTTGAATCTTGTCAGGCAGAAGTGAACAAATTG...AGTCCAGTCTGTTAAAGTGCCATCGCCATCTCTTCTGTTCAGATTTTGACATTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084497.12 |
||
| CDS-3UTR GCA 90 bp | ACAACACTCAATAAGCCATTAAGAAAAGTAGTGCCAAGTGGAGAGTGTCATTTGGCTATGAGGGGACTCTaGAGGATCAATCAAATTTTC | + |
|
Preference number: 4 (lower is better) Translates to: TTLNKPLRKVVPSGECHLAMRGL*RINQIF Trigger: GAAAATTTGATTGATCCTGCAGAGTCCCCTCATAGC...CAAATGACACTCTCCACTTGGCACTACTTTTCTTAATGGCTTATTGAGTGTTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000084497.12 |
||
| CDS-3UTR TCA 90 bp | TTGTCTTCTCAATTTGTTCACTTCTGCCTGACAAGATTCAACAACTCGCTCACTACATATTCTAAAGCATaGGTAGAATTGTTGGCGGTA | + |
|
Preference number: 4 (lower is better) Translates to: LSSQFVHFCLTRFNNSLTTYSKA*VELLAV Trigger: TACCGCCAACAATTCTACTCATGCTTTAGAATATGT...AGTGAGCGAGTTGTTGAATCTTGTCAGGCAGAAGTGAACAAATTGAGAAGACAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129552.2 |
||
| CDS-3UTR GCA 90 bp | ACAACACTCAATAAGCCATTAAGAAAAGTAGTGCCAAGTGGAGAGTGTCATTTGTGGATCTCAATTACTTaGAGAAACTCTGTGTTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: TTLNKPLRKVVPSGECHLWISIT*RNSVLL Trigger: CAGCAACACAGAGTTTCTGCAAGTAATTGAGATCCA...CAAATGACACTCTCCACTTGGCACTACTTTTCTTAATGGCTTATTGAGTGTTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084497.12 ENSMUST00000129552.2 |
||
| CDS-3UTR TCA 90 bp | TTTCTCCTGAAGTGCATTATAAACCTGATAAATTGCCCTGATGTCCTTCATGACACATATTCTAAAGCATaGGTAGAATTGTTGGCGGTA | + |
|
Preference number: 4 (lower is better) Translates to: FLLKCIINLINCPDVLHDTYSKA*VELLAV Trigger: TACCGCCAACAATTCTACTCATGCTTTAGAATATGT...GTCATGAAGGACATCAGGGCAATTTATCAGGTTTATAATGCACTTCAGGAGAAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129552.2 ENSMUST00000134784.2 |
||
| CDS-3UTR GCA 90 bp | CAGATTAAGTCCTCAACAACACTCAATAAGCCATTAAGAAAAGTAGTGCCAAGTAAAAAGTCAGTACCGTaGTCTTTAATGACCTTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: QIKSSTTLNKPLRKVVPSKKSVP*SLMTLA Trigger: TGCCAAGGTCATTAAAGAGCACGGTACTGACTTTTT...ACTTGGCACTACTTTTCTTAATGGCTTATTGAGTGTTGTTGAGGACTTAATCTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000084497.12 |
||
| CDS-3UTR CAA 90 bp | CCCACAGTGAACCCTGTGCTCAGGCACAGTCTCCCCACAGTGAACCCTGTGCTCTGGTCGGCGTTGCTGTaGGCGCTGTGGAAACACACA | + |
|
Preference number: 5 (lower is better) Translates to: PTVNPVLRHSLPTVNPVLWSALL*ALWKHT Trigger: TGTGTGTTTCCACAGCGCCAACAGCAACGCCGACCA...GAGCACAGGGTTCACTGTGGGGAGACTGTGCCTGAGCACAGGGTTCACTGTGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106161.8 |
||
| CDS-3UTR CAA 90 bp | AGGTTAGTGGTGGAGCACGTGCTTAGCCTGGGAACCCTGTGCTCAGGCACAGTCATGCGGGTGAGCTGCTaGTGGATGACCTGTTCCCTG | + |
|
Preference number: 5 (lower is better) Translates to: RLVVEHVLSLGTLCSGTVMRVSC*WMTCSL Trigger: CAGGGAACAGGTCATCCACAAGCAGCTCACCCGCAT...GACTGTGCCTGAGCACAGGGTTCCCAGGCTAAGCACGTGCTCCACCACTAACCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106161.8 |
||
| CDS-3UTR CAA 90 bp | AGGATAGCAGTTACAATGCAGACCCTGGGGCACAATCAAAGCAGGACGGTCAGCCCTTCGTGGTCGGCGTaGCTGTTGGCGCTGTGGAAA | + |
|
Preference number: 5 (lower is better) Translates to: RIAVTMQTLGHNQSRTVSPSWSA*LLALWK Trigger: TTTCCACAGCGCCAACAGCAACGCCGACCACGAAGG...GCTGACCGTCCTGCTTTGATTGTGCCCCAGGGTCTGCATTGTAACTGCTATCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084497.12 ENSMUST00000129552.2 |
||
| CDS-3UTR CAA 90 bp | AGGATAGCAGTTACAATGCAGACCCTGGGGCACAATCAAAGCAGGACGGTCAGCTGGTCGGCGTTGCTGTaGGCGCTGTGGAAACACACA | + |
|
Preference number: 5 (lower is better) Translates to: RIAVTMQTLGHNQSRTVSWSALL*ALWKHT Trigger: TGTGTGTTTCCACAGCGCCAACAGCAACGCCGACCA...GCTGACCGTCCTGCTTTGATTGTGCCCCAGGGTCTGCATTGTAACTGCTATCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084497.12 ENSMUST00000129552.2 |
||
| CDS-3UTR CAA 90 bp | AACCCTGTGCTCAGGCACAGTCTCCCCACAGTGAACCCTGTGCTCAGGCACAGTGGCACTGAAGACACTTaGTACTCTTGCTGGCTAGTA | + |
|
Preference number: 5 (lower is better) Translates to: NPVLRHSLPTVNPVLRHSGTEDT*YSCWLV Trigger: TACTAGCCAGCAAGAGTACAAAGTGTCTTCAGTGCC...ACTGTGCCTGAGCACAGGGTTCACTGTGGGGAGACTGTGCCTGAGCACAGGGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106161.8 |
||
| CDS CCA 90 bp | ACAAGGCTGATGGTTATGGATCTCTCTCCCAGCAAAAATCCTTCGTaGTCGGCGTTGCTGTTGGCGCTGTGGAAACACACAGCGCTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: TRLMVMDLSPSKNPS*SALLLALWKHTALK Trigger: CTTCAGCGCTGTGTGTTTCCACAGCGCCAACAGCAACGCCGACCACGAAGGATTTTTGCTGGGAGAGAGATCCATAACCATCAGCCTTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000147786.9 |
||
| CDS-3UTR CAA 90 bp | AGGTTAGTGGTGGAGCACGTGCTTAGCCTGGGAACCCTGTGCTCAGGCACAGTCTGCAGAAACTCTGTGTaGCTGATTTGTGAGTCACTG | + |
|
Preference number: 5 (lower is better) Translates to: RLVVEHVLSLGTLCSGTVCRNSV*LICESL Trigger: CAGTGACTCACAAATCAGCAACACAGAGTTTCTGCA...GACTGTGCCTGAGCACAGGGTTCCCAGGCTAAGCACGTGCTCCACCACTAACCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106161.8 |
||
| CDS-3UTR CAA 90 bp | GGGGTGGAGTGCAGGTTAGTGGTGGAGCACGTGCTTAGCCTGGGAACCCTGTGCATGGATCTCAATTACTaGCAGAAACTCTGTGTTGCT | + |
|
Preference number: 5 (lower is better) Translates to: GVECRLVVEHVLSLGTLCMDLNY*QKLCVA Trigger: AGCAACACAGAGTTTCTGCAAGTAATTGAGATCCAT...GCACAGGGTTCCCAGGCTAAGCACGTGCTCCACCACTAACCTGCACTCCACCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106161.8 |
||
| CDS-3UTR CAA 90 bp | TCCTCCACAACTCTAGCCCAGGATCCGCCACACCTAAGTACATTACATCCTTTCATGCGGGTGAGCTGCTaGTGGATGACCTGTTCCCTG | + |
|
Preference number: 5 (lower is better) Translates to: SSTTLAQDPPHLSTLHPFMRVSC*WMTCSL Trigger: CAGGGAACAGGTCATCCACAAGCAGCTCACCCGCAT...GAAAGGATGTAATGTACTTAGGTGTGGCGGATCCTGGGCTAGAGTTGTGGAGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084497.12 ENSMUST00000129552.2 |
||
| CDS-3UTR CAA 90 bp | CACAGTGAACCCTGTGCTCAGGCACAGTCTCCCCACAGTGAACCCTGTGCTCAGTCTTGCTGGCTAGTATaGCCTAGATTGGGAATAGCA | + |
|
Preference number: 5 (lower is better) Translates to: HSEPCAQAQSPHSEPCAQSCWLV*PRLGIA Trigger: TGCTATTCCCAATCTAGGCAATACTAGCCAGCAAGA...CTGAGCACAGGGTTCACTGTGGGGAGACTGTGCCTGAGCACAGGGTTCACTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106161.8 |
||
| CDS-3UTR CAA 90 bp | TCTGGGAGTTCTGTGCACAGGATGCTCCACTCAGGAGCCGCGGCATCTGAGAAAGGCACTGAAGACACTTaGTACTCTTGCTGGCTAGTA | + |
|
Preference number: 5 (lower is better) Translates to: SGSSVHRMLHSGAAASEKGTEDT*YSCWLV Trigger: TACTAGCCAGCAAGAGTACAAAGTGTCTTCAGTGCC...TTTCTCAGATGCCGCGGCTCCTGAGTGGAGCATCCTGTGCACAGAACTCCCAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084497.12 |
||
| CDS-3UTR CAA 90 bp | AACCCTGTGCTCAGGCACAGTCTCCCCACAGTGAACCCTGTGCTCAGGCACAGTAACTCTGAGACGTGTTaGGCACTGAAGACACTTTGT | + |
|
Preference number: 5 (lower is better) Translates to: NPVLRHSLPTVNPVLRHSNSETC*ALKTLC Trigger: ACAAAGTGTCTTCAGTGCCAAACACGTCTCAGAGTT...ACTGTGCCTGAGCACAGGGTTCACTGTGGGGAGACTGTGCCTGAGCACAGGGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106161.8 |
||
| CDS-3UTR CAA 90 bp | AACCCTGTGCTCAGGCACAGTCTCCCCACAGTGAACCCTGTGCTCAGGCACAGTCTAGTATTGCCTAGATaGGGAATAGCAAGTGATATC | + |
|
Preference number: 5 (lower is better) Translates to: NPVLRHSLPTVNPVLRHSLVLPR*GIASDI Trigger: GATATCACTTGCTATTCCCAATCTAGGCAATACTAG...ACTGTGCCTGAGCACAGGGTTCACTGTGGGGAGACTGTGCCTGAGCACAGGGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106161.8 |
||
| CDS-3UTR CAA 90 bp | GTCTTCTCAATTTGTTCACTTCTGCCTGACAAGATTCAACAACTCGCTCACTCTTGGTCGGCGTTGCTGTaGGCGCTGTGGAAACACACA | + |
|
Preference number: 5 (lower is better) Translates to: VFSICSLLPDKIQQLAHSWSALL*ALWKHT Trigger: TGTGTGTTTCCACAGCGCCAACAGCAACGCCGACCA...AGAGTGAGCGAGTTGTTGAATCTTGTCAGGCAGAAGTGAACAAATTGAGAAGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129552.2 ENSMUST00000147786.9 |
||
| CDS-3UTR CAA 90 bp | ACCAGGATAGCAGTTACAATGCAGACCCTGGGGCACAATCAAAGCAGGACGGTCAGGGCCGTGAATTCTTaGAATGTGAGTATTCGCTAT | + |
|
Preference number: 5 (lower is better) Translates to: TRIAVTMQTLGHNQSRTVRAVNS*NVSIRY Trigger: ATAGCGAATACTCACATTCAAAGAATTCACGGCCCT...GACCGTCCTGCTTTGATTGTGCCCCAGGGTCTGCATTGTAACTGCTATCCTGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084497.12 |
||
| CDS-3UTR CAA 90 bp | TCTTCTCAATTTGTTCACTTCTGCCTGACAAGATTCAACAACTCGCTCACTCTTTGGTCGGCGTTGCTGTaGGCGCTGTGGAAACACACA | + |
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Preference number: 5 (lower is better) Translates to: SSQFVHFCLTRFNNSLTLWSALL*ALWKHT Trigger: TGTGTGTTTCCACAGCGCCAACAGCAACGCCGACCA...AAGAGTGAGCGAGTTGTTGAATCTTGTCAGGCAGAAGTGAACAAATTGAGAAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129552.2 ENSMUST00000147786.9 |
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| CDS-3UTR CAA 90 bp | TCCTCCACAACTCTAGCCCAGGATCCGCCACACCTAAGTACATTACATCCTTTCTGCAGAAACTCTGTGTaGCTGATTTGTGAGTCACTG | + |
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Preference number: 5 (lower is better) Translates to: SSTTLAQDPPHLSTLHPFCRNSV*LICESL Trigger: CAGTGACTCACAAATCAGCAACACAGAGTTTCTGCA...GAAAGGATGTAATGTACTTAGGTGTGGCGGATCCTGGGCTAGAGTTGTGGAGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084497.12 ENSMUST00000129552.2 |
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| CDS-3UTR CAA 90 bp | CTGAAGTGCATTATAAACCTGATAAATTGCCCTGATGTCCTTCATGACTCCATCATGCGGGTGAGCTGCTaGTGGATGACCTGTTCCCTG | + |
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Preference number: 5 (lower is better) Translates to: LKCIINLINCPDVLHDSIMRVSC*WMTCSL Trigger: CAGGGAACAGGTCATCCACAAGCAGCTCACCCGCAT...GATGGAGTCATGAAGGACATCAGGGCAATTTATCAGGTTTATAATGCACTTCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129552.2 ENSMUST00000134784.2 |
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| CDS-3UTR CAA 90 bp | TGGCATAACTCTGAGACGTGTTTGGCACTGAAGACACTTTGTACTCTTGCTGGCTGCAGAAACTCTGTGTaGCTGATTTGTGAGTCACTG | + |
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Preference number: 5 (lower is better) Translates to: WHNSETCLALKTLCTLAGCRNSV*LICESL Trigger: CAGTGACTCACAAATCAGCAACACAGAGTTTCTGCA...GCCAGCAAGAGTACAAAGTGTCTTCAGTGCCAAACACGTCTCAGAGTTATGCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134784.2 |
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| CDS-3UTR CAA 90 bp | AAATCCACTGTGTCTGGGATCTGTTCACTACAGACTCAGGCCTGGCTTCTCCCTCTAGTATTGCCTAGATaGGGAATAGCAAGTGATATC | + |
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Preference number: 5 (lower is better) Translates to: KSTVSGICSLQTQAWLLPLVLPR*GIASDI Trigger: GATATCACTTGCTATTCCCAATCTAGGCAATACTAG...AGGGAGAAGCCAGGCCTGAGTCTGTAGTGAACAGATCCCAGACACAGTGGATTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084497.12 |
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| CDS-3UTR CAA 90 bp | TCCTCCACAACTCTAGCCCAGGATCCGCCACACCTAAGTACATTACATCCTTTCATGGATCTCAATTACTaGCAGAAACTCTGTGTTGCT | + |
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Preference number: 5 (lower is better) Translates to: SSTTLAQDPPHLSTLHPFMDLNY*QKLCVA Trigger: AGCAACACAGAGTTTCTGCAAGTAATTGAGATCCAT...GAAAGGATGTAATGTACTTAGGTGTGGCGGATCCTGGGCTAGAGTTGTGGAGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084497.12 ENSMUST00000129552.2 |
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| CDS-3UTR CAA 90 bp | TCGACATTCAAATCAAACGGAAGTGGTGTGAGCCCAGAAAACCAGGATAGCAGTAACTCTGAGACGTGTTaGGCACTGAAGACACTTTGT | + |
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Preference number: 5 (lower is better) Translates to: STFKSNGSGVSPENQDSSNSETC*ALKTLC Trigger: ACAAAGTGTCTTCAGTGCCAAACACGTCTCAGAGTT...ACTGCTATCCTGGTTTTCTGGGCTCACACCACTTCCGTTTGATTTGAATGTCGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084497.12 |
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| CDS-3UTR CAA 90 bp | AGTGCATCCCAATGGTCTCCGCACATTTGCAATTATCCCCTAAATGGCAACTTTTCTTGCTGGCTAGTATaGCCTAGATTGGGAATAGCA | + |
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Preference number: 5 (lower is better) Translates to: SASQWSPHICNYPLNGNFSCWLV*PRLGIA Trigger: TGCTATTCCCAATCTAGGCAATACTAGCCAGCAAGA...AAAGTTGCCATTTAGGGGATAATTGCAAATGTGCGGAGACCATTGGGATGCACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084497.12 |
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| CDS-3UTR CAA 90 bp | TCCTCCACAACTCTAGCCCAGGATCCGCCACACCTAAGTACATTACATCCTTTCTACTTTCTTGATTGTTaGGGTGGAAATCAGAGTAAG | + |
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Preference number: 5 (lower is better) Translates to: SSTTLAQDPPHLSTLHPFYFLDC*GGNQSK Trigger: CTTACTCTGATTTCCACCCAAACAATCAAGAAAGTA...GAAAGGATGTAATGTACTTAGGTGTGGCGGATCCTGGGCTAGAGTTGTGGAGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084497.12 |
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| CDS-3UTR CAA 90 bp | AAATCTGAACAGAAGAGATGGCGATGGCACTTTAACAGACTGGACTTCATACCGGCTCAGAGTACTTTCTaGATTGTTTGGGTGGAAATC | + |
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Preference number: 5 (lower is better) Translates to: KSEQKRWRWHFNRLDFIPAQSTF*IVWVEI Trigger: GATTTCCACCCAAACAATCAAGAAAGTACTCTGAGC...CGGTATGAAGTCCAGTCTGTTAAAGTGCCATCGCCATCTCTTCTGTTCAGATTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084497.12 |
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| CDS TCA 90 bp | GTTATGGATCTCAATTACTTGCAGAAACTCTGTGTTGCTGATTTGTaGGTCACTGATGCTAAAAGTTTCCTCTTGTCTTACCTCTCCCAG | + |
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Preference number: 5 (lower is better) Translates to: VMDLNYLQKLCVADL*VTDAKSFLLSYLSQ Trigger: CTGGGAGAGGTAAGACAAGAGGAAACTTTTAGCATCAGTGACTCACAAATCAGCAACACAGAGTTTCTGCAAGTAATTGAGATCCATAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084497.12 ENSMUST00000106161.8 ENSMUST00000129552.2 |
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| CDS TCA 90 bp | CCGATAACTTTCAATTACTTGCAGAAACTCTGTGTTGCTGATTTGTaGGTCACTGATGCTAAAAGTTTCCTCTTGTCTTACCTCTCCCAG | + |
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Preference number: 5 (lower is better) Translates to: PITFNYLQKLCVADL*VTDAKSFLLSYLSQ Trigger: CTGGGAGAGGTAAGACAAGAGGAAACTTTTAGCATCAGTGACTCACAAATCAGCAACACAGAGTTTCTGCAAGTAATTGAAAGTTATCGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134784.2 |
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| CDS-3UTR CAA 90 bp | TTTCTCCTGAAGTGCATTATAAACCTGATAAATTGCCCTGATGTCCTTCATGACTGCAGAAACTCTGTGTaGCTGATTTGTGAGTCACTG | + |
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Preference number: 5 (lower is better) Translates to: FLLKCIINLINCPDVLHDCRNSV*LICESL Trigger: CAGTGACTCACAAATCAGCAACACAGAGTTTCTGCA...GTCATGAAGGACATCAGGGCAATTTATCAGGTTTATAATGCACTTCAGGAGAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129552.2 ENSMUST00000134784.2 |
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| CDS-3UTR CAA 90 bp | TTTCTCCTGAAGTGCATTATAAACCTGATAAATTGCCCTGATGTCCTTCATGACATGGATCTCAATTACTaGCAGAAACTCTGTGTTGCT | + |
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Preference number: 5 (lower is better) Translates to: FLLKCIINLINCPDVLHDMDLNY*QKLCVA Trigger: AGCAACACAGAGTTTCTGCAAGTAATTGAGATCCAT...GTCATGAAGGACATCAGGGCAATTTATCAGGTTTATAATGCACTTCAGGAGAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129552.2 |
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| CDS CAA 72 bp | GATCTCTCTCCCAGCAAAAATCCTTCGTGGTCGGCGTaGCTGTTGGCGCTGTGGAAACACACAGCGCTGAAG | + |
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Preference number: 6 (lower is better) Translates to: DLSPSKNPSWSA*LLALWKHTALK Trigger: CTTCAGCGCTGTGTGTTTCCACAGCGCCAACAGCAACGCCGACCACGAAGGATTTTTGCTGGGAGAGAGATC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000147786.9 |
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| CDS CCA 72 bp | ATGGTTATGGATCTCTCTCCCAGCAAAAATCCTTCGTaGTCGGCGTTGCTGTTGGCGCTGTGGAAACACACA | + |
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Preference number: 6 (lower is better) Translates to: MVMDLSPSKNPS*SALLLALWKHT Trigger: TGTGTGTTTCCACAGCGCCAACAGCAACGCCGACCACGAAGGATTTTTGCTGGGAGAGAGATCCATAACCAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000147786.9 |
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| CDS CAA 72 bp | TGGTTATGGATCTCAATTACTTGCAGAAACTCTGTGTaGCTGATTTGTGAGTCACTGATGCTAAAAGTTTCC | + |
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Preference number: 6 (lower is better) Translates to: WLWISITCRNSV*LICESLMLKVS Trigger: GGAAACTTTTAGCATCAGTGACTCACAAATCAGCAACACAGAGTTTCTGCAAGTAATTGAGATCCATAACCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084497.12 ENSMUST00000106161.8 ENSMUST00000129552.2 |
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