Pregenerated sensors for ABRA (Mus musculus)
Ensembl gene IDs: ENSMUSG00000042895Ensembl transcript IDs: ENSMUST00000054742.7
Found 110 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TACAAAAACTGTCACAGCTTCCACTCTGCTGGTTTCCTTCAATTCTaGCATGCTTCTCTCTGTGACAACACATGTGCATGTGTATACATA | + |
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Preference number: 1 (lower is better) Translates to: YKNCHSFHSAGFLQF*HASLCDNTCACVYI Trigger: TATGTATACACATGCACATGTGTTGTCACAGAGAGAAGCATGTCAGAATTGAAGGAAACCAGCAGAGTGGAAGCTGTGACAGTTTTTGTA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054742.7 |
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| 3UTR-3UTR GCA 90 bp | TTTAACAAAGTGGAAATGATTGCATGTAAGCCTGCTGTCCCAGCACTACAGAGGCATTGCAGAGCAGCTTaGCTTGGAGCTTGTAACACA | + |
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Preference number: 2 (lower is better) Translates to: FNKVEMIACKPAVPALQRHCRAA*LGACNT Trigger: TGTGTTACAAGCTCCAAGGCAAGCTGCTCTGCAATG...CCTCTGTAGTGCTGGGACAGCAGGCTTACATGCAATCATTTCCACTTTGTTAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054742.7 |
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| 3UTR-3UTR TCA 90 bp | ACAGTAAGAAATTGTAGTCTCTTGGGAGGCAGAGGCAGGCAGATTTCTGAGTTCGCTGACATAACGGTTTaGAGTCATCCTTCGTTAAAT | + |
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Preference number: 2 (lower is better) Translates to: TVRNCSLLGGRGRQISEFADITV*SHPSLN Trigger: ATTTAACGAAGGATGACTTCAAACCGTTATGTCAGC...GAACTCAGAAATCTGCCTGCCTCTGCCTCCCAAGAGACTACAATTTCTTACTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054742.7 |
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| 3UTR-3UTR TCA 90 bp | ACAGTAAGAAATTGTAGTCTCTTGGGAGGCAGAGGCAGGCAGATTTCTGAGTTCGAGCTTTTGCTCCATTaGATATTCGTTTCACAGAGT | + |
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Preference number: 2 (lower is better) Translates to: TVRNCSLLGGRGRQISEFELLLH*IFVSQS Trigger: ACTCTGTGAAACGAATATTCAATGGAGCAAAAGCTC...GAACTCAGAAATCTGCCTGCCTCTGCCTCCCAAGAGACTACAATTTCTTACTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054742.7 |
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| 3UTR-3UTR TCA 90 bp | ACAGTAAGAAATTGTAGTCTCTTGGGAGGCAGAGGCAGGCAGATTTCTGAGTTCTTGTTCACATCTGAATaGGGAAAGCTGATTAAAGGA | + |
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Preference number: 2 (lower is better) Translates to: TVRNCSLLGGRGRQISEFLFTSE*GKLIKG Trigger: TCCTTTAATCAGCTTTCCTCATTCAGATGTGAACAA...GAACTCAGAAATCTGCCTGCCTCTGCCTCCCAAGAGACTACAATTTCTTACTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054742.7 |
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| 3UTR-3UTR CAA 90 bp | TTTAACAAAGTGGAAATGATTGCATGTAAGCCTGCTGTCCCAGCACTACAGAGGTTAATATTGATAACATaGCAGAGCAGCTTGCCTTGG | + |
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Preference number: 3 (lower is better) Translates to: FNKVEMIACKPAVPALQRLILIT*QSSLPW Trigger: CCAAGGCAAGCTGCTCTGCAATGTTATCAATATTAA...CCTCTGTAGTGCTGGGACAGCAGGCTTACATGCAATCATTTCCACTTTGTTAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054742.7 |
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| 3UTR-3UTR CAA 90 bp | ACAGTAAGAAATTGTAGTCTCTTGGGAGGCAGAGGCAGGCAGATTTCTGAGTTCGAAGGCCAGAAATTTTaGCTTAAAAAGGTAAGTGGA | + |
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Preference number: 3 (lower is better) Translates to: TVRNCSLLGGRGRQISEFEGQKF*LKKVSG Trigger: TCCACTTACCTTTTTAAGCAAAAATTTCTGGCCTTC...GAACTCAGAAATCTGCCTGCCTCTGCCTCCCAAGAGACTACAATTTCTTACTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054742.7 |
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| 3UTR TCA 72 bp | GCTGTAATCAAACCACACAGAGGAGCTTCAACATCTTaGATTCTAACTTTGTTTACCCACCAAAGGTGCTGT | + |
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Preference number: 3 (lower is better) Translates to: AVIKPHRGASTS*ILTLFTHQRCC Trigger: ACAGCACCTTTGGTGGGTAAACAAAGTTAGAATTCAAGATGTTGAAGCTCCTCTGTGTGGTTTGATTACAGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054742.7 |
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| 3UTR TCA 72 bp | TGCTGGTTTCCTTCAATTCTGACATGCTTCTCTCTGTaGCAACACATGTGCATGTGTATACATAAGAAATCC | + |
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Preference number: 3 (lower is better) Translates to: CWFPSILTCFSL*QHMCMCIHKKS Trigger: GGATTTCTTATGTATACACATGCACATGTGTTGTCACAGAGAGAAGCATGTCAGAATTGAAGGAAACCAGCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054742.7 |
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| CDS-3UTR GCA 90 bp | TTTAACAAAGTGGAAATGATTGCATGTAAGCCTGCTGTCCCAGCACTACAGAGGTCCCGGCAGCCAGCCTaGAGGCTCCTGGGCCTGTTT | + |
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Preference number: 4 (lower is better) Translates to: FNKVEMIACKPAVPALQRSRQPA*RLLGLF Trigger: AAACAGGCCCAGGAGCCTGCAGGCTGGCTGCCGGGA...CCTCTGTAGTGCTGGGACAGCAGGCTTACATGCAATCATTTCCACTTTGTTAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054742.7 |
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| CDS-3UTR TCA 90 bp | ACAGTAAGAAATTGTAGTCTCTTGGGAGGCAGAGGCAGGCAGATTTCTGAGTTCAGAGCAAGGGGCGTTTaGTCCTGGCAGGAGCCACAG | + |
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Preference number: 4 (lower is better) Translates to: TVRNCSLLGGRGRQISEFRARGV*SWQEPQ Trigger: CTGTGGCTCCTGCCAGGATCAAACGCCCCTTGCTCT...GAACTCAGAAATCTGCCTGCCTCTGCCTCCCAAGAGACTACAATTTCTTACTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054742.7 |
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| CDS-3UTR CCA 90 bp | ACAGTAAGAAATTGTAGTCTCTTGGGAGGCAGAGGCAGGCAGATTTCTGAGTTCCCCTCGTCTCCCTTGTaGAGCCGAGTGGACATGGCT | + |
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Preference number: 4 (lower is better) Translates to: TVRNCSLLGGRGRQISEFPSSPL*SRVDMA Trigger: AGCCATGTCCACTCGGCTCCACAAGGGAGACGAGGG...GAACTCAGAAATCTGCCTGCCTCTGCCTCCCAAGAGACTACAATTTCTTACTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054742.7 |
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| CDS-3UTR TCA 90 bp | ACAGTAAGAAATTGTAGTCTCTTGGGAGGCAGAGGCAGGCAGATTTCTGAGTTCCTCGGTGGCTTCTTCTaGGTGTTGTCCCTCTCCGTC | + |
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Preference number: 4 (lower is better) Translates to: TVRNCSLLGGRGRQISEFLGGFF*VLSLSV Trigger: GACGGAGAGGGACAACACTCAGAAGAAGCCACCGAG...GAACTCAGAAATCTGCCTGCCTCTGCCTCCCAAGAGACTACAATTTCTTACTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054742.7 |
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| CDS-3UTR GCA 90 bp | ACAGTAAGAAATTGTAGTCTCTTGGGAGGCAGAGGCAGGCAGATTTCTGAGTTCCTCAGAGTACCTGTTTaGCTGGGAGAGCAAGGGGCG | + |
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Preference number: 4 (lower is better) Translates to: TVRNCSLLGGRGRQISEFLRVPV*LGEQGA Trigger: CGCCCCTTGCTCTCCCAGGCAAACAGGTACTCTGAG...GAACTCAGAAATCTGCCTGCCTCTGCCTCCCAAGAGACTACAATTTCTTACTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054742.7 |
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| CDS-3UTR GCA 90 bp | ACAGTAAGAAATTGTAGTCTCTTGGGAGGCAGAGGCAGGCAGATTTCTGAGTTCCCCTTTCAGCTGTCTTaGTTCCCTCTTTGGGGCGGC | + |
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Preference number: 4 (lower is better) Translates to: TVRNCSLLGGRGRQISEFPFQLS*FPLWGG Trigger: GCCGCCCCAAAGAGGGAAGCAAGACAGCTGAAAGGG...GAACTCAGAAATCTGCCTGCCTCTGCCTCCCAAGAGACTACAATTTCTTACTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054742.7 |
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| CDS-3UTR CCA 90 bp | ACAGTAAGAAATTGTAGTCTCTTGGGAGGCAGAGGCAGGCAGATTTCTGAGTTCGCTCTTCCGCTCGCTTaGCCCTTTCAGCTGTCTTGC | + |
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Preference number: 4 (lower is better) Translates to: TVRNCSLLGGRGRQISEFALPLA*PFQLSC Trigger: GCAAGACAGCTGAAAGGGCCAAGCGAGCGGAAGAGC...GAACTCAGAAATCTGCCTGCCTCTGCCTCCCAAGAGACTACAATTTCTTACTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054742.7 |
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| CDS-3UTR GCA 90 bp | ACAGTAAGAAATTGTAGTCTCTTGGGAGGCAGAGGCAGGCAGATTTCTGAGTTCTTCTCATTCGCCCACTaGTGCCAACCTCGGGCCAAA | + |
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Preference number: 4 (lower is better) Translates to: TVRNCSLLGGRGRQISEFFSFAH*CQPRAK Trigger: TTTGGCCCGAGGTTGGCAGCAGTGGGCGAATGAGAA...GAACTCAGAAATCTGCCTGCCTCTGCCTCCCAAGAGACTACAATTTCTTACTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054742.7 |
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| CDS-3UTR CCA 90 bp | TTTAACAAAGTGGAAATGATTGCATGTAAGCCTGCTGTCCCAGCACTACAGAGGCAGCCTGCAGGCTCCTaGGCCTGTTTGGTACTGTTC | + |
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Preference number: 4 (lower is better) Translates to: FNKVEMIACKPAVPALQRQPAGS*ACLVLF Trigger: GAACAGTACCAAACAGGCCCAGGAGCCTGCAGGCTG...CCTCTGTAGTGCTGGGACAGCAGGCTTACATGCAATCATTTCCACTTTGTTAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054742.7 |
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| CDS-3UTR CCA 90 bp | TTTAACAAAGTGGAAATGATTGCATGTAAGCCTGCTGTCCCAGCACTACAGAGGTCTTGCTTCCCTCTTTaGGGCGGCCATAGCCCTCGT | + |
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Preference number: 4 (lower is better) Translates to: FNKVEMIACKPAVPALQRSCFPL*GGHSPR Trigger: ACGAGGGCTATGGCCGCCCCAAAGAGGGAAGCAAGA...CCTCTGTAGTGCTGGGACAGCAGGCTTACATGCAATCATTTCCACTTTGTTAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054742.7 |
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| CDS-3UTR GCA 90 bp | TTTAACAAAGTGGAAATGATTGCATGTAAGCCTGCTGTCCCAGCACTACAGAGGTCATTCGCCCACTGCTaGCAACCTCGGGCCAAATTG | + |
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Preference number: 4 (lower is better) Translates to: FNKVEMIACKPAVPALQRSFAHC*QPRAKL Trigger: CAATTTGGCCCGAGGTTGGCAGCAGTGGGCGAATGA...CCTCTGTAGTGCTGGGACAGCAGGCTTACATGCAATCATTTCCACTTTGTTAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054742.7 |
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| CDS-3UTR GCA 90 bp | TTTAACAAAGTGGAAATGATTGCATGTAAGCCTGCTGTCCCAGCACTACAGAGGACAGGCGCTGCATCTTaGTCAGGCCTCTCCTCCATA | + |
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Preference number: 4 (lower is better) Translates to: FNKVEMIACKPAVPALQRTGAAS*SGLSSI Trigger: TATGGAGGAGAGGCCTGAGCAAGATGCAGCGCCTGT...CCTCTGTAGTGCTGGGACAGCAGGCTTACATGCAATCATTTCCACTTTGTTAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054742.7 |
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| CDS-3UTR GCA 90 bp | TTTAACAAAGTGGAAATGATTGCATGTAAGCCTGCTGTCCCAGCACTACAGAGGTCATCGGCCCACTGCTaGCACCTCCCTTTCAAGTTG | + |
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Preference number: 4 (lower is better) Translates to: FNKVEMIACKPAVPALQRSSAHC*HLPFKL Trigger: CAACTTGAAAGGGAGGTGGCAGCAGTGGGCCGATGA...CCTCTGTAGTGCTGGGACAGCAGGCTTACATGCAATCATTTCCACTTTGTTAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054742.7 |
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| CDS-3UTR GCA 90 bp | TTTAACAAAGTGGAAATGATTGCATGTAAGCCTGCTGTCCCAGCACTACAGAGGTGTTCATCGGCCCACTaGTGCCACCTCCCTTTCAAG | + |
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Preference number: 4 (lower is better) Translates to: FNKVEMIACKPAVPALQRCSSAH*CHLPFK Trigger: CTTGAAAGGGAGGTGGCAGCAGTGGGCCGATGAACA...CCTCTGTAGTGCTGGGACAGCAGGCTTACATGCAATCATTTCCACTTTGTTAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054742.7 |
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| CDS-3UTR GCA 90 bp | ACAGTAAGAAATTGTAGTCTCTTGGGAGGCAGAGGCAGGCAGATTTCTGAGTTCTGGTCGTCTCGGCCTTaGCATAGCATCTCTCCTTCA | + |
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Preference number: 4 (lower is better) Translates to: TVRNCSLLGGRGRQISEFWSSRP*HSISPS Trigger: TGAAGGAGAGATGCTATGGCAAGGCCGAGACGACCA...GAACTCAGAAATCTGCCTGCCTCTGCCTCCCAAGAGACTACAATTTCTTACTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054742.7 |
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| CDS-3UTR CCA 90 bp | TTTAACAAAGTGGAAATGATTGCATGTAAGCCTGCTGTCCCAGCACTACAGAGGGCTCCTGGGCCTGTTTaGTACTGTTCTCATTCGCCC | + |
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Preference number: 4 (lower is better) Translates to: FNKVEMIACKPAVPALQRAPGPV*YCSHSP Trigger: GGGCGAATGAGAACAGTACCAAACAGGCCCAGGAGC...CCTCTGTAGTGCTGGGACAGCAGGCTTACATGCAATCATTTCCACTTTGTTAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054742.7 |
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| CDS-3UTR CCA 90 bp | TTTAACAAAGTGGAAATGATTGCATGTAAGCCTGCTGTCCCAGCACTACAGAGGGAGTACCTGTTTGCCTaGGAGAGCAAGGGGCGTTTG | + |
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Preference number: 4 (lower is better) Translates to: FNKVEMIACKPAVPALQREYLFA*ESKGRL Trigger: CAAACGCCCCTTGCTCTCCCAGGCAAACAGGTACTC...CCTCTGTAGTGCTGGGACAGCAGGCTTACATGCAATCATTTCCACTTTGTTAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054742.7 |
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| CDS-3UTR CCA 90 bp | TTTAACAAAGTGGAAATGATTGCATGTAAGCCTGCTGTCCCAGCACTACAGAGGTTGAGCTTCTGGGACTaGACGTGTTCATCGGCCCAC | + |
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Preference number: 4 (lower is better) Translates to: FNKVEMIACKPAVPALQRLSFWD*TCSSAH Trigger: GTGGGCCGATGAACACGTCCAGTCCCAGAAGCTCAA...CCTCTGTAGTGCTGGGACAGCAGGCTTACATGCAATCATTTCCACTTTGTTAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054742.7 |
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| CDS-3UTR CCA 90 bp | ACAGTAAGAAATTGTAGTCTCTTGGGAGGCAGAGGCAGGCAGATTTCTGAGTTCTTGCCATCTCGTCTGTaGCGAGCCATTGTGCGGATA | + |
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Preference number: 4 (lower is better) Translates to: TVRNCSLLGGRGRQISEFLPSRL*RAIVRI Trigger: TATCCGCACAATGGCTCGCCACAGACGAGATGGCAA...GAACTCAGAAATCTGCCTGCCTCTGCCTCCCAAGAGACTACAATTTCTTACTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054742.7 |
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| CDS-3UTR TCA 90 bp | TTTAACAAAGTGGAAATGATTGCATGTAAGCCTGCTGTCCCAGCACTACAGAGGGTTTCCTGGCACGCATaGGGATGCCCACGACTTTAT | + |
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Preference number: 4 (lower is better) Translates to: FNKVEMIACKPAVPALQRVSWHA*GCPRLY Trigger: ATAAAGTCGTGGGCATCCTCATGCGTGCCAGGAAAC...CCTCTGTAGTGCTGGGACAGCAGGCTTACATGCAATCATTTCCACTTTGTTAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054742.7 |
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| CDS-3UTR CCA 90 bp | TTTAACAAAGTGGAAATGATTGCATGTAAGCCTGCTGTCCCAGCACTACAGAGGGTCTCGATCTGGCTTTaGAGACAGAGTTTTGGGGGC | + |
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Preference number: 4 (lower is better) Translates to: FNKVEMIACKPAVPALQRVSIWL*RQSFGG Trigger: GCCCCCAAAACTCTGTCTCCAAAGCCAGATCGAGAC...CCTCTGTAGTGCTGGGACAGCAGGCTTACATGCAATCATTTCCACTTTGTTAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054742.7 |
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| CDS-3UTR CCA 90 bp | ACAGTAAGAAATTGTAGTCTCTTGGGAGGCAGAGGCAGGCAGATTTCTGAGTTCGCTCAGACACCAGGTTaGTGCATTTTCTTCTCCGTG | + |
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Preference number: 4 (lower is better) Translates to: TVRNCSLLGGRGRQISEFAQTPG*CIFFSV Trigger: CACGGAGAAGAAAATGCACCAACCTGGTGTCTGAGC...GAACTCAGAAATCTGCCTGCCTCTGCCTCCCAAGAGACTACAATTTCTTACTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054742.7 |
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| CDS-3UTR CCA 90 bp | ACAGTAAGAAATTGTAGTCTCTTGGGAGGCAGAGGCAGGCAGATTTCTGAGTTCAAGGGATTGAGCTTCTaGGACTGGACGTGTTCATCG | + |
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Preference number: 4 (lower is better) Translates to: TVRNCSLLGGRGRQISEFKGLSF*DWTCSS Trigger: CGATGAACACGTCCAGTCCCAGAAGCTCAATCCCTT...GAACTCAGAAATCTGCCTGCCTCTGCCTCCCAAGAGACTACAATTTCTTACTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054742.7 |
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| CDS-3UTR TCA 90 bp | TTTAACAAAGTGGAAATGATTGCATGTAAGCCTGCTGTCCCAGCACTACAGAGGGATGGGCCTTACAGTTaGGTGTCTCAGAGTACCTGT | + |
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Preference number: 4 (lower is better) Translates to: FNKVEMIACKPAVPALQRDGPYS*VSQSTC Trigger: ACAGGTACTCTGAGACACTCAACTGTAAGGCCCATC...CCTCTGTAGTGCTGGGACAGCAGGCTTACATGCAATCATTTCCACTTTGTTAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054742.7 |
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| CDS-3UTR CCA 90 bp | TTTAACAAAGTGGAAATGATTGCATGTAAGCCTGCTGTCCCAGCACTACAGAGGTGTCACTCTTCCACGTaGGCTCTTCCTGTTCCATCA | + |
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Preference number: 4 (lower is better) Translates to: FNKVEMIACKPAVPALQRCHSST*ALPVPS Trigger: TGATGGAACAGGAAGAGCCCACGTGGAAGAGTGACA...CCTCTGTAGTGCTGGGACAGCAGGCTTACATGCAATCATTTCCACTTTGTTAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054742.7 |
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| CDS-3UTR CCA 90 bp | ACAGTAAGAAATTGTAGTCTCTTGGGAGGCAGAGGCAGGCAGATTTCTGAGTTCAGAGTAATCACAACATaGTCGTCTCGGCCTTGCCAT | + |
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Preference number: 4 (lower is better) Translates to: TVRNCSLLGGRGRQISEFRVITT*SSRPCH Trigger: ATGGCAAGGCCGAGACGACCATGTTGTGATTACTCT...GAACTCAGAAATCTGCCTGCCTCTGCCTCCCAAGAGACTACAATTTCTTACTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054742.7 |
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| CDS-3UTR GCA 90 bp | TTTAACAAAGTGGAAATGATTGCATGTAAGCCTGCTGTCCCAGCACTACAGAGGCAGACACCAGGTTGGTaGATTTTCTTCTCCGTGTTG | + |
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Preference number: 4 (lower is better) Translates to: FNKVEMIACKPAVPALQRQTPGW*IFFSVL Trigger: CAACACGGAGAAGAAAATGCACCAACCTGGTGTCTG...CCTCTGTAGTGCTGGGACAGCAGGCTTACATGCAATCATTTCCACTTTGTTAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054742.7 |
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| CDS-3UTR GCA 90 bp | TTTAACAAAGTGGAAATGATTGCATGTAAGCCTGCTGTCCCAGCACTACAGAGGATCTCTCCTTCAAAGTaGACCAGTCCGTGTTTCCTG | + |
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Preference number: 4 (lower is better) Translates to: FNKVEMIACKPAVPALQRISPSK*TSPCFL Trigger: CAGGAAACACGGACTGGTGCACTTTGAAGGAGAGAT...CCTCTGTAGTGCTGGGACAGCAGGCTTACATGCAATCATTTCCACTTTGTTAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054742.7 |
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| CDS-3UTR CCA 90 bp | TTTAACAAAGTGGAAATGATTGCATGTAAGCCTGCTGTCCCAGCACTACAGAGGTCTCCGAAAGTAACCTaGATCTTGCCATCTCGTCTG | + |
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Preference number: 4 (lower is better) Translates to: FNKVEMIACKPAVPALQRSPKVT*ILPSRL Trigger: CAGACGAGATGGCAAGATCCAGGTTACTTTCGGAGA...CCTCTGTAGTGCTGGGACAGCAGGCTTACATGCAATCATTTCCACTTTGTTAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054742.7 |
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| CDS-3UTR CCA 90 bp | TTTAACAAAGTGGAAATGATTGCATGTAAGCCTGCTGTCCCAGCACTACAGAGGGGAGCCGAGTGGACATaGCTAGATCATAGTCAAATT | + |
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Preference number: 4 (lower is better) Translates to: FNKVEMIACKPAVPALQRGAEWT*LDHSQI Trigger: AATTTGACTATGATCTAGCCATGTCCACTCGGCTCC...CCTCTGTAGTGCTGGGACAGCAGGCTTACATGCAATCATTTCCACTTTGTTAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054742.7 |
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| 3UTR CAA 72 bp | GGCTGTAATCAAACCACACAGAGGAGCTTCAACATCTaGAATTCTAACTTTGTTTACCCACCAAAGGTGCTG | + |
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Preference number: 4 (lower is better) Translates to: GCNQTTQRSFNI*NSNFVYPPKVL Trigger: CAGCACCTTTGGTGGGTAAACAAAGTTAGAATTCAAGATGTTGAAGCTCCTCTGTGTGGTTTGATTACAGCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054742.7 |
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| 3UTR CAA 72 bp | TTAGCTTTTTCAAATACAGTAAGAAATTGTAGTCTCTaGGGAGGCAGAGGCAGGCAGATTTCTGAGTTCGAG | + |
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Preference number: 4 (lower is better) Translates to: LAFSNTVRNCSL*GGRGRQISEFE Trigger: CTCGAACTCAGAAATCTGCCTGCCTCTGCCTCCCAAGAGACTACAATTTCTTACTGTATTTGAAAAAGCTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054742.7 |
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| 3UTR CAA 72 bp | TCATTTAATATTGATAACATTGCAGAGCAGCTTGCCTaGGAGCTTGTAACACATTACTATTTATCAGCGGTG | + |
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Preference number: 4 (lower is better) Translates to: SFNIDNIAEQLA*ELVTHYYLSAV Trigger: CACCGCTGATAAATAGTAATGTGTTACAAGCTCCAAGGCAAGCTGCTCTGCAATGTTATCAATATTAAATGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054742.7 |
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| CDS GCA 90 bp | ATTCGCCCACTGCTGCCAACCTCGGGCCAAATTGATAACCAGGGTTaGTGTGCGGACCTTCCGGAGGGCACTCTTGGCCGGCCCCGCCTC | + |
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Preference number: 5 (lower is better) Translates to: IRPLLPTSGQIDNQG*CADLPEGTLGRPRL Trigger: GAGGCGGGGCCGGCCAAGAGTGCCCTCCGGAAGGTCCGCACAGCAACCCTGGTTATCAATTTGGCCCGAGGTTGGCAGCAGTGGGCGAAT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054742.7 |
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| CDS GCA 90 bp | CTGGGAGAGCAAGGGGCGTTTGATCCTGGCAGGAGCCACAGGCGCTaGATCTTGCTCAGGCCTCTCCTCCATATCCCCTCCGTAGCCACT | + |
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Preference number: 5 (lower is better) Translates to: LGEQGAFDPGRSHRR*ILLRPLLHIPSVAT Trigger: AGTGGCTACGGAGGGGATATGGAGGAGAGGCCTGAGCAAGATGCAGCGCCTGTGGCTCCTGCCAGGATCAAACGCCCCTTGCTCTCCCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054742.7 |
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| CDS CCA 90 bp | GCTCTTCCGCTCGCTTGGCCCTTTCAGCTGTCTTGCTTCCCTCTTTaGGGCGGCCATAGCCCTCGTCTCCCTTGTGGAGCCGAGTGGACA | + |
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Preference number: 5 (lower is better) Translates to: ALPLAWPFQLSCFPL*GGHSPRLPCGAEWT Trigger: TGTCCACTCGGCTCCACAAGGGAGACGAGGGCTATGGCCGCCCCAAAGAGGGAAGCAAGACAGCTGAAAGGGCCAAGCGAGCGGAAGAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054742.7 |
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| CDS CCA 90 bp | CATGAGTTGCTCCCGGCAGCCAGCCTGCAGGCTCCTGGGCCTGTTTaGTACTGTTCTCATTCGCCCACTGCTGCCAACCTCGGGCCAAAT | + |
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Preference number: 5 (lower is better) Translates to: HELLPAASLQAPGPV*YCSHSPTAANLGPN Trigger: ATTTGGCCCGAGGTTGGCAGCAGTGGGCGAATGAGAACAGTACCAAACAGGCCCAGGAGCCTGCAGGCTGGCTGCCGGGAGCAACTCATG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054742.7 |
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| CDS GCA 90 bp | CCCGATAGATGTGCTCTTCCGCTCGCTTGGCCCTTTCAGCTGTCTTaGTTCCCTCTTTGGGGCGGCCATAGCCCTCGTCTCCCTTGTGGA | + |
|
Preference number: 5 (lower is better) Translates to: PDRCALPLAWPFQLS*FPLWGGHSPRLPCG Trigger: TCCACAAGGGAGACGAGGGCTATGGCCGCCCCAAAGAGGGAAGCAAGACAGCTGAAAGGGCCAAGCGAGCGGAAGAGCACATCTATCGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054742.7 |
||
| CDS GCA 90 bp | GCAGGCTCCTGGGCCTGTTTGGTACTGTTCTCATTCGCCCACTGCTaGCAACCTCGGGCCAAATTGATAACCAGGGTTGCTGTGCGGACC | + |
|
Preference number: 5 (lower is better) Translates to: AGSWACLVLFSFAHC*QPRAKLITRVAVRT Trigger: GGTCCGCACAGCAACCCTGGTTATCAATTTGGCCCGAGGTTGGCAGCAGTGGGCGAATGAGAACAGTACCAAACAGGCCCAGGAGCCTGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054742.7 |
||
| CDS GCA 90 bp | CCTGCAGGCTCCTGGGCCTGTTTGGTACTGTTCTCATTCGCCCACTaGTGCCAACCTCGGGCCAAATTGATAACCAGGGTTGCTGTGCGG | + |
|
Preference number: 5 (lower is better) Translates to: PAGSWACLVLFSFAH*CQPRAKLITRVAVR Trigger: CCGCACAGCAACCCTGGTTATCAATTTGGCCCGAGGTTGGCAGCAGTGGGCGAATGAGAACAGTACCAAACAGGCCCAGGAGCCTGCAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054742.7 |
||
| CDS CCA 90 bp | TTCCGATGGGCCTTACAGTTGAGTGTCTCAGAGTACCTGTTTGCCTaGGAGAGCAAGGGGCGTTTGATCCTGGCAGGAGCCACAGGCGCT | + |
|
Preference number: 5 (lower is better) Translates to: FRWALQLSVSEYLFA*ESKGRLILAGATGA Trigger: AGCGCCTGTGGCTCCTGCCAGGATCAAACGCCCCTTGCTCTCCCAGGCAAACAGGTACTCTGAGACACTCAACTGTAAGGCCCATCGGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054742.7 |
||
| CDS-3UTR CAA 90 bp | ACAGTAAGAAATTGTAGTCTCTTGGGAGGCAGAGGCAGGCAGATTTCTGAGTTCTTCCGGAGGGCACTCTaGGCCGGCCCCGCCTCCCTT | + |
|
Preference number: 5 (lower is better) Translates to: TVRNCSLLGGRGRQISEFFRRAL*AGPASL Trigger: AAGGGAGGCGGGGCCGGCCAAGAGTGCCCTCCGGAA...GAACTCAGAAATCTGCCTGCCTCTGCCTCCCAAGAGACTACAATTTCTTACTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054742.7 |
||
| CDS GCA 90 bp | ACAACATGGTCGTCTCGGCCTTGCCATAGCATCTCTCCTTCAAAGTaGACCAGTCCGTGTTTCCTGGCACGCATGAGGATGCCCACGACT | + |
|
Preference number: 5 (lower is better) Translates to: TTWSSRPCHSISPSK*TSPCFLARMRMPTT Trigger: AGTCGTGGGCATCCTCATGCGTGCCAGGAAACACGGACTGGTGCACTTTGAAGGAGAGATGCTATGGCAAGGCCGAGACGACCATGTTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054742.7 |
||
| CDS CCA 90 bp | CTCCGTAGCCACTGTCCTCTGTGTCTACGCTGTCACTCTTCCACGTaGGCTCTTCCTGTTCCATCACTTTCCAGCCTTTGGTCAGCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: LRSHCPLCLRCHSST*ALPVPSLSSLWSAQ Trigger: CTGAGCTGACCAAAGGCTGGAAAGTGATGGAACAGGAAGAGCCCACGTGGAAGAGTGACAGCGTAGACACAGAGGACAGTGGCTACGGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054742.7 |
||
| CDS GCA 90 bp | AAGGGATTGAGCTTCTGGGACTGGACGTGTTCATCGGCCCACTGCTaGCACCTCCCTTTCAAGTTGTCCACTTGGCTGTATTTCCGATGG | + |
|
Preference number: 5 (lower is better) Translates to: KGLSFWDWTCSSAHC*HLPFKLSTWLYFRW Trigger: CCATCGGAAATACAGCCAAGTGGACAACTTGAAAGGGAGGTGGCAGCAGTGGGCCGATGAACACGTCCAGTCCCAGAAGCTCAATCCCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054742.7 |
||
| CDS GCA 90 bp | CTGAAGGGATTGAGCTTCTGGGACTGGACGTGTTCATCGGCCCACTaGTGCCACCTCCCTTTCAAGTTGTCCACTTGGCTGTATTTCCGA | + |
|
Preference number: 5 (lower is better) Translates to: LKGLSFWDWTCSSAH*CHLPFKLSTWLYFR Trigger: TCGGAAATACAGCCAAGTGGACAACTTGAAAGGGAGGTGGCAGCAGTGGGCCGATGAACACGTCCAGTCCCAGAAGCTCAATCCCTTCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054742.7 |
||
| CDS CCA 90 bp | CACTCTTCCACGTGGGCTCTTCCTGTTCCATCACTTTCCAGCCTTTaGTCAGCTCAGACACCAGGTTGGTGCATTTTCTTCTCCGTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: HSSTWALPVPSLSSL*SAQTPGWCIFFSVL Trigger: CAACACGGAGAAGAAAATGCACCAACCTGGTGTCTGAGCTGACCAAAGGCTGGAAAGTGATGGAACAGGAAGAGCCCACGTGGAAGAGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054742.7 |
||
| CDS CCA 90 bp | TGCTGCCACCTCCCTTTCAAGTTGTCCACTTGGCTGTATTTCCGATaGGCCTTACAGTTGAGTGTCTCAGAGTACCTGTTTGCCTGGGAG | + |
|
Preference number: 5 (lower is better) Translates to: CCHLPFKLSTWLYFR*ALQLSVSEYLFAWE Trigger: CTCCCAGGCAAACAGGTACTCTGAGACACTCAACTGTAAGGCCCATCGGAAATACAGCCAAGTGGACAACTTGAAAGGGAGGTGGCAGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054742.7 |
||
| CDS CCA 90 bp | TGTTCATCGGCCCACTGCTGCCACCTCCCTTTCAAGTTGTCCACTTaGCTGTATTTCCGATGGGCCTTACAGTTGAGTGTCTCAGAGTAC | + |
|
Preference number: 5 (lower is better) Translates to: CSSAHCCHLPFKLST*LYFRWALQLSVSEY Trigger: GTACTCTGAGACACTCAACTGTAAGGCCCATCGGAAATACAGCCAAGTGGACAACTTGAAAGGGAGGTGGCAGCAGTGGGCCGATGAACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054742.7 |
||
| CDS-3UTR CAA 90 bp | ACAGTAAGAAATTGTAGTCTCTTGGGAGGCAGAGGCAGGCAGATTTCTGAGTTCCACAGGCGCTGCATCTaGCTCAGGCCTCTCCTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: TVRNCSLLGGRGRQISEFHRRCI*LRPLLH Trigger: ATGGAGGAGAGGCCTGAGCAAGATGCAGCGCCTGTG...GAACTCAGAAATCTGCCTGCCTCTGCCTCCCAAGAGACTACAATTTCTTACTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054742.7 |
||
| CDS-3UTR CAA 90 bp | ACAGTAAGAAATTGTAGTCTCTTGGGAGGCAGAGGCAGGCAGATTTCTGAGTTCGCCCTTTCAGCTGTCTaGCTTCCCTCTTTGGGGCGG | + |
|
Preference number: 5 (lower is better) Translates to: TVRNCSLLGGRGRQISEFALSAV*LPSLGR Trigger: CCGCCCCAAAGAGGGAAGCAAGACAGCTGAAAGGGC...GAACTCAGAAATCTGCCTGCCTCTGCCTCCCAAGAGACTACAATTTCTTACTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054742.7 |
||
| CDS TCA 90 bp | CTTTCAAGTTGTCCACTTGGCTGTATTTCCGATGGGCCTTACAGTTaGGTGTCTCAGAGTACCTGTTTGCCTGGGAGAGCAAGGGGCGTT | + |
|
Preference number: 5 (lower is better) Translates to: LSSCPLGCISDGPYS*VSQSTCLPGRARGV Trigger: AACGCCCCTTGCTCTCCCAGGCAAACAGGTACTCTGAGACACTCAACTGTAAGGCCCATCGGAAATACAGCCAAGTGGACAACTTGAAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054742.7 |
||
| CDS-3UTR CAA 90 bp | ACAGTAAGAAATTGTAGTCTCTTGGGAGGCAGAGGCAGGCAGATTTCTGAGTTCTCTCAGAGTACCTGTTaGCCTGGGAGAGCAAGGGGC | + |
|
Preference number: 5 (lower is better) Translates to: TVRNCSLLGGRGRQISEFSQSTC*PGRARG Trigger: GCCCCTTGCTCTCCCAGGCAAACAGGTACTCTGAGA...GAACTCAGAAATCTGCCTGCCTCTGCCTCCCAAGAGACTACAATTTCTTACTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054742.7 |
||
| CDS-3UTR CAA 90 bp | ACAGTAAGAAATTGTAGTCTCTTGGGAGGCAGAGGCAGGCAGATTTCTGAGTTCTGCTCTTCCGCTCGCTaGGCCCTTTCAGCTGTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: TVRNCSLLGGRGRQISEFCSSAR*ALSAVL Trigger: CAAGACAGCTGAAAGGGCCAAGCGAGCGGAAGAGCA...GAACTCAGAAATCTGCCTGCCTCTGCCTCCCAAGAGACTACAATTTCTTACTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054742.7 |
||
| CDS-3UTR CAA 90 bp | TTTAACAAAGTGGAAATGATTGCATGTAAGCCTGCTGTCCCAGCACTACAGAGGGGCTCCTGGGCCTGTTaGGTACTGTTCTCATTCGCC | + |
|
Preference number: 5 (lower is better) Translates to: FNKVEMIACKPAVPALQRGSWAC*VLFSFA Trigger: GGCGAATGAGAACAGTACCAAACAGGCCCAGGAGCC...CCTCTGTAGTGCTGGGACAGCAGGCTTACATGCAATCATTTCCACTTTGTTAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054742.7 |
||
| CDS TCA 90 bp | GCATCTCTCCTTCAAAGTGCACCAGTCCGTGTTTCCTGGCACGCATaGGGATGCCCACGACTTTATCAGAAATTCGAACATAGCGATCAA | + |
|
Preference number: 5 (lower is better) Translates to: ASLLQSAPVRVSWHA*GCPRLYQKFEHSDQ Trigger: TTGATCGCTATGTTCGAATTTCTGATAAAGTCGTGGGCATCCTCATGCGTGCCAGGAAACACGGACTGGTGCACTTTGAAGGAGAGATGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054742.7 |
||
| CDS-3UTR CAA 90 bp | ACAGTAAGAAATTGTAGTCTCTTGGGAGGCAGAGGCAGGCAGATTTCTGAGTTCCAACCTCGGGCCAAATaGATAACCAGGGTTGCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: TVRNCSLLGGRGRQISEFQPRAK*ITRVAV Trigger: CACAGCAACCCTGGTTATCAATTTGGCCCGAGGTTG...GAACTCAGAAATCTGCCTGCCTCTGCCTCCCAAGAGACTACAATTTCTTACTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054742.7 |
||
| CDS-3UTR CAA 90 bp | TTTAACAAAGTGGAAATGATTGCATGTAAGCCTGCTGTCCCAGCACTACAGAGGCGTCTCGATCTGGCTTaGGAGACAGAGTTTTGGGGG | + |
|
Preference number: 5 (lower is better) Translates to: FNKVEMIACKPAVPALQRRLDLA*ETEFWG Trigger: CCCCCAAAACTCTGTCTCCAAAGCCAGATCGAGACG...CCTCTGTAGTGCTGGGACAGCAGGCTTACATGCAATCATTTCCACTTTGTTAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054742.7 |
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| CDS-3UTR CAA 90 bp | ACAGTAAGAAATTGTAGTCTCTTGGGAGGCAGAGGCAGGCAGATTTCTGAGTTCATCACTTTCCAGCCTTaGGTCAGCTCAGACACCAGG | + |
|
Preference number: 5 (lower is better) Translates to: TVRNCSLLGGRGRQISEFITFQP*VSSDTR Trigger: CCTGGTGTCTGAGCTGACCAAAGGCTGGAAAGTGAT...GAACTCAGAAATCTGCCTGCCTCTGCCTCCCAAGAGACTACAATTTCTTACTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054742.7 |
||
| CDS-3UTR CAA 90 bp | TTTAACAAAGTGGAAATGATTGCATGTAAGCCTGCTGTCCCAGCACTACAGAGGTCGTCACTGAAGGGATaGAGCTTCTGGGACTGGACG | + |
|
Preference number: 5 (lower is better) Translates to: FNKVEMIACKPAVPALQRSSLKG*SFWDWT Trigger: CGTCCAGTCCCAGAAGCTCAATCCCTTCAGTGACGA...CCTCTGTAGTGCTGGGACAGCAGGCTTACATGCAATCATTTCCACTTTGTTAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054742.7 |
||
| CDS CCA 90 bp | TGTTGGCGAGTCGTGACTAAGAAGGATTCTGTCAATGTCATTCTCTaGCTGAATAGCTTCAGACACGCCGCCATCATTCTCATACCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: CWRVVTKKDSVNVIL*LNSFRHAAIILIPV Trigger: CACAGGTATGAGAATGATGGCGGCGTGTCTGAAGCTATTCAGCCAGAGAATGACATTGACAGAATCCTTCTTAGTCACGACTCGCCAACA 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054742.7 |
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| CDS CCA 90 bp | TTTGGTCAGCTCAGACACCAGGTTGGTGCATTTTCTTCTCCGTGTTaGCGAGTCGTGACTAAGAAGGATTCTGTCAATGTCATTCTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: FGQLRHQVGAFSSPC*RVVTKKDSVNVILW Trigger: CCAGAGAATGACATTGACAGAATCCTTCTTAGTCACGACTCGCCAACACGGAGAAGAAAATGCACCAACCTGGTGTCTGAGCTGACCAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054742.7 |
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| CDS-3UTR CAA 90 bp | TTTAACAAAGTGGAAATGATTGCATGTAAGCCTGCTGTCCCAGCACTACAGAGGCGATGGGCCTTACAGTaGAGTGTCTCAGAGTACCTG | + |
|
Preference number: 5 (lower is better) Translates to: FNKVEMIACKPAVPALQRRWALQ*SVSEYL Trigger: CAGGTACTCTGAGACACTCAACTGTAAGGCCCATCG...CCTCTGTAGTGCTGGGACAGCAGGCTTACATGCAATCATTTCCACTTTGTTAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054742.7 |
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| CDS-3UTR CAA 90 bp | ACAGTAAGAAATTGTAGTCTCTTGGGAGGCAGAGGCAGGCAGATTTCTGAGTTCAAAGTAACCTGGATCTaGCCATCTCGTCTGTGGCGA | + |
|
Preference number: 5 (lower is better) Translates to: TVRNCSLLGGRGRQISEFKVTWI*PSRLWR Trigger: TCGCCACAGACGAGATGGCAAGATCCAGGTTACTTT...GAACTCAGAAATCTGCCTGCCTCTGCCTCCCAAGAGACTACAATTTCTTACTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054742.7 |
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| CDS CCA 90 bp | TCAAAGAGTTCTCCGAAAGTAACCTGGATCTTGCCATCTCGTCTGTaGCGAGCCATTGTGCGGATAACAAAGCACAGTTCCATAATTTCC | + |
|
Preference number: 5 (lower is better) Translates to: SKSSPKVTWILPSRL*RAIVRITKHSSIIS Trigger: GGAAATTATGGAACTGTGCTTTGTTATCCGCACAATGGCTCGCCACAGACGAGATGGCAAGATCCAGGTTACTTTCGGAGAACTCTTTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054742.7 |
||
| CDS-3UTR CAA 90 bp | TTTAACAAAGTGGAAATGATTGCATGTAAGCCTGCTGTCCCAGCACTACAGAGGAGCTCAGACACCAGGTaGGTGCATTTTCTTCTCCGT | + |
|
Preference number: 5 (lower is better) Translates to: FNKVEMIACKPAVPALQRSSDTR*VHFLLR Trigger: ACGGAGAAGAAAATGCACCAACCTGGTGTCTGAGCT...CCTCTGTAGTGCTGGGACAGCAGGCTTACATGCAATCATTTCCACTTTGTTAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054742.7 |
||
| CDS CAA 90 bp | GAGCAAGGGGCGTTTGATCCTGGCAGGAGCCACAGGCGCTGCATCTaGCTCAGGCCTCTCCTCCATATCCCCTCCGTAGCCACTGTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: EQGAFDPGRSHRRCI*LRPLLHIPSVATVL Trigger: GAGGACAGTGGCTACGGAGGGGATATGGAGGAGAGGCCTGAGCAAGATGCAGCGCCTGTGGCTCCTGCCAGGATCAAACGCCCCTTGCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054742.7 |
||
| CDS GCA 72 bp | CTGCTGCCAACCTCGGGCCAAATTGATAACCAGGGTTaGTGTGCGGACCTTCCGGAGGGCACTCTTGGCCGG | + |
|
Preference number: 6 (lower is better) Translates to: LLPTSGQIDNQG*CADLPEGTLGR Trigger: CCGGCCAAGAGTGCCCTCCGGAAGGTCCGCACAGCAACCCTGGTTATCAATTTGGCCCGAGGTTGGCAGCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054742.7 |
||
| CDS GCA 72 bp | CAAGGGGCGTTTGATCCTGGCAGGAGCCACAGGCGCTaGATCTTGCTCAGGCCTCTCCTCCATATCCCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: QGAFDPGRSHRR*ILLRPLLHIPS Trigger: GGAGGGGATATGGAGGAGAGGCCTGAGCAAGATGCAGCGCCTGTGGCTCCTGCCAGGATCAAACGCCCCTTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054742.7 |
||
| CDS CCA 72 bp | CTCGCTTGGCCCTTTCAGCTGTCTTGCTTCCCTCTTTaGGGCGGCCATAGCCCTCGTCTCCCTTGTGGAGCC | + |
|
Preference number: 6 (lower is better) Translates to: LAWPFQLSCFPL*GGHSPRLPCGA Trigger: GGCTCCACAAGGGAGACGAGGGCTATGGCCGCCCCAAAGAGGGAAGCAAGACAGCTGAAAGGGCCAAGCGAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054742.7 |
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| CDS CAA 72 bp | GCGTTTGATCCTGGCAGGAGCCACAGGCGCTGCATCTaGCTCAGGCCTCTCCTCCATATCCCCTCCGTAGCC | + |
|
Preference number: 6 (lower is better) Translates to: AFDPGRSHRRCI*LRPLLHIPSVA Trigger: GGCTACGGAGGGGATATGGAGGAGAGGCCTGAGCAAGATGCAGCGCCTGTGGCTCCTGCCAGGATCAAACGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054742.7 |
||
| CDS TCA 72 bp | CAGAGTACCTGTTTGCCTGGGAGAGCAAGGGGCGTTTaGTCCTGGCAGGAGCCACAGGCGCTGCATCTTGCT | + |
|
Preference number: 6 (lower is better) Translates to: QSTCLPGRARGV*SWQEPQALHLA Trigger: AGCAAGATGCAGCGCCTGTGGCTCCTGCCAGGATCAAACGCCCCTTGCTCTCCCAGGCAAACAGGTACTCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054742.7 |
||
| CDS CAA 72 bp | TCAGAGTACCTGTTTGCCTGGGAGAGCAAGGGGCGTTaGATCCTGGCAGGAGCCACAGGCGCTGCATCTTGC | + |
|
Preference number: 6 (lower is better) Translates to: SEYLFAWESKGR*ILAGATGAASC Trigger: GCAAGATGCAGCGCCTGTGGCTCCTGCCAGGATCAAACGCCCCTTGCTCTCCCAGGCAAACAGGTACTCTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054742.7 |
||
| CDS CAA 72 bp | TTCTCATTCGCCCACTGCTGCCAACCTCGGGCCAAATaGATAACCAGGGTTGCTGTGCGGACCTTCCGGAGG | + |
|
Preference number: 6 (lower is better) Translates to: FSFAHCCQPRAK*ITRVAVRTFRR Trigger: CCTCCGGAAGGTCCGCACAGCAACCCTGGTTATCAATTTGGCCCGAGGTTGGCAGCAGTGGGCGAATGAGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054742.7 |
||
| CDS CAA 90 bp | TTGGTACTGTTCTCATTCGCCCACTGCTGCCAACCTCGGGCCAAATaGATAACCAGGGTTGCTGTGCGGACCTTCCGGAGGGCACTCTTG | + |
|
Preference number: 6 (lower is better) Translates to: LVLFSFAHCCQPRAK*ITRVAVRTFRRALL Trigger: CAAGAGTGCCCTCCGGAAGGTCCGCACAGCAACCCTGGTTATCAATTTGGCCCGAGGTTGGCAGCAGTGGGCGAATGAGAACAGTACCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054742.7 |
||
| CDS GCA 72 bp | TTGAGCTTCTGGGACTGGACGTGTTCATCGGCCCACTaGTGCCACCTCCCTTTCAAGTTGTCCACTTGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: LSFWDWTCSSAH*CHLPFKLSTWL Trigger: CAGCCAAGTGGACAACTTGAAAGGGAGGTGGCAGCAGTGGGCCGATGAACACGTCCAGTCCCAGAAGCTCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054742.7 |
||
| CDS CCA 72 bp | GCCTTACAGTTGAGTGTCTCAGAGTACCTGTTTGCCTaGGAGAGCAAGGGGCGTTTGATCCTGGCAGGAGCC | + |
|
Preference number: 6 (lower is better) Translates to: ALQLSVSEYLFA*ESKGRLILAGA Trigger: GGCTCCTGCCAGGATCAAACGCCCCTTGCTCTCCCAGGCAAACAGGTACTCTGAGACACTCAACTGTAAGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054742.7 |
||
| CDS CAA 90 bp | CGGTGGCTTCTTCTGAGTGTTGTCCCTCTCCGTCTCGATCTGGCTTaGGAGACAGAGTTTTGGGGGCATGCTGGTAAGGACCGGCTTCTT | + |
|
Preference number: 6 (lower is better) Translates to: RWLLLSVVPLRLDLA*ETEFWGHAGKDRLL Trigger: AAGAAGCCGGTCCTTACCAGCATGCCCCCAAAACTCTGTCTCCAAAGCCAGATCGAGACGGAGAGGGACAACACTCAGAAGAAGCCACCG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054742.7 |
||
| CDS GCA 72 bp | AGCTTCTGGGACTGGACGTGTTCATCGGCCCACTGCTaGCACCTCCCTTTCAAGTTGTCCACTTGGCTGTAT | + |
|
Preference number: 6 (lower is better) Translates to: SFWDWTCSSAHC*HLPFKLSTWLY Trigger: ATACAGCCAAGTGGACAACTTGAAAGGGAGGTGGCAGCAGTGGGCCGATGAACACGTCCAGTCCCAGAAGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054742.7 |
||
| CDS GCA 72 bp | TCGTCTCGGCCTTGCCATAGCATCTCTCCTTCAAAGTaGACCAGTCCGTGTTTCCTGGCACGCATGAGGATG | + |
|
Preference number: 6 (lower is better) Translates to: SSRPCHSISPSK*TSPCFLARMRM Trigger: CATCCTCATGCGTGCCAGGAAACACGGACTGGTGCACTTTGAAGGAGAGATGCTATGGCAAGGCCGAGACGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054742.7 |
||
| CDS CCA 72 bp | TCAAATTCGTCACTGAAGGGATTGAGCTTCTGGGACTaGACGTGTTCATCGGCCCACTGCTGCCACCTCCCT | + |
|
Preference number: 6 (lower is better) Translates to: SNSSLKGLSFWD*TCSSAHCCHLP Trigger: AGGGAGGTGGCAGCAGTGGGCCGATGAACACGTCCAGTCCCAGAAGCTCAATCCCTTCAGTGACGAATTTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054742.7 |
||
| CDS CAA 90 bp | GACTGGACGTGTTCATCGGCCCACTGCTGCCACCTCCCTTTCAAGTaGTCCACTTGGCTGTATTTCCGATGGGCCTTACAGTTGAGTGTC | + |
|
Preference number: 6 (lower is better) Translates to: DWTCSSAHCCHLPFK*STWLYFRWALQLSV Trigger: GACACTCAACTGTAAGGCCCATCGGAAATACAGCCAAGTGGACAACTTGAAAGGGAGGTGGCAGCAGTGGGCCGATGAACACGTCCAGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054742.7 |
||
| CDS GCA 72 bp | TGGGCCTGTTTGGTACTGTTCTCATTCGCCCACTGCTaGCAACCTCGGGCCAAATTGATAACCAGGGTTGCT | + |
|
Preference number: 6 (lower is better) Translates to: WACLVLFSFAHC*QPRAKLITRVA Trigger: AGCAACCCTGGTTATCAATTTGGCCCGAGGTTGGCAGCAGTGGGCGAATGAGAACAGTACCAAACAGGCCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054742.7 |
||
| CDS GCA 72 bp | TCCTGGGCCTGTTTGGTACTGTTCTCATTCGCCCACTaGTGCCAACCTCGGGCCAAATTGATAACCAGGGTT | + |
|
Preference number: 6 (lower is better) Translates to: SWACLVLFSFAH*CQPRAKLITRV Trigger: AACCCTGGTTATCAATTTGGCCCGAGGTTGGCAGCAGTGGGCGAATGAGAACAGTACCAAACAGGCCCAGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054742.7 |
||
| CDS CCA 72 bp | GCCCACTGCTGCCACCTCCCTTTCAAGTTGTCCACTTaGCTGTATTTCCGATGGGCCTTACAGTTGAGTGTC | + |
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Preference number: 6 (lower is better) Translates to: AHCCHLPFKLST*LYFRWALQLSV Trigger: GACACTCAACTGTAAGGCCCATCGGAAATACAGCCAAGTGGACAACTTGAAAGGGAGGTGGCAGCAGTGGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054742.7 |
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| CDS CAA 72 bp | GGCCCACTGCTGCCACCTCCCTTTCAAGTTGTCCACTaGGCTGTATTTCCGATGGGCCTTACAGTTGAGTGT | + |
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Preference number: 6 (lower is better) Translates to: GPLLPPPFQVVH*AVFPMGLTVEC Trigger: ACACTCAACTGTAAGGCCCATCGGAAATACAGCCAAGTGGACAACTTGAAAGGGAGGTGGCAGCAGTGGGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054742.7 |
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| CDS CAA 72 bp | TGTTCATCGGCCCACTGCTGCCACCTCCCTTTCAAGTaGTCCACTTGGCTGTATTTCCGATGGGCCTTACAG | + |
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Preference number: 6 (lower is better) Translates to: CSSAHCCHLPFK*STWLYFRWALQ Trigger: CTGTAAGGCCCATCGGAAATACAGCCAAGTGGACAACTTGAAAGGGAGGTGGCAGCAGTGGGCCGATGAACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054742.7 |
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| CDS CCA 72 bp | TCACTTTCCAGCCTTTGGTCAGCTCAGACACCAGGTTaGTGCATTTTCTTCTCCGTGTTGGCGAGTCGTGAC | + |
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Preference number: 6 (lower is better) Translates to: SLSSLWSAQTPG*CIFFSVLASRD Trigger: GTCACGACTCGCCAACACGGAGAAGAAAATGCACCAACCTGGTGTCTGAGCTGACCAAAGGCTGGAAAGTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054742.7 |
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| CDS CAA 90 bp | CCTTTCAAGTTGTCCACTTGGCTGTATTTCCGATGGGCCTTACAGTaGAGTGTCTCAGAGTACCTGTTTGCCTGGGAGAGCAAGGGGCGT | + |
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Preference number: 6 (lower is better) Translates to: PFKLSTWLYFRWALQ*SVSEYLFAWESKGR Trigger: ACGCCCCTTGCTCTCCCAGGCAAACAGGTACTCTGAGACACTCAACTGTAAGGCCCATCGGAAATACAGCCAAGTGGACAACTTGAAAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054742.7 |
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| CDS CAA 90 bp | GTGTTCATCGGCCCACTGCTGCCACCTCCCTTTCAAGTTGTCCACTaGGCTGTATTTCCGATGGGCCTTACAGTTGAGTGTCTCAGAGTA | + |
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Preference number: 6 (lower is better) Translates to: VFIGPLLPPPFQVVH*AVFPMGLTVECLRV Trigger: TACTCTGAGACACTCAACTGTAAGGCCCATCGGAAATACAGCCAAGTGGACAACTTGAAAGGGAGGTGGCAGCAGTGGGCCGATGAACAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054742.7 |
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| CDS CAA 90 bp | TCACTCTTCCACGTGGGCTCTTCCTGTTCCATCACTTTCCAGCCTTaGGTCAGCTCAGACACCAGGTTGGTGCATTTTCTTCTCCGTGTT | + |
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Preference number: 6 (lower is better) Translates to: SLFHVGSSCSITFQP*VSSDTRLVHFLLRV Trigger: AACACGGAGAAGAAAATGCACCAACCTGGTGTCTGAGCTGACCAAAGGCTGGAAAGTGATGGAACAGGAAGAGCCCACGTGGAAGAGTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054742.7 |
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| CDS TCA 72 bp | TTTCCTTTTAATGTGGGAGACCTCGGTGGCTTCTTCTaGGTGTTGTCCCTCTCCGTCTCGATCTGGCTTTGG | + |
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Preference number: 6 (lower is better) Translates to: FPFNVGDLGGFF*VLSLSVSIWLW Trigger: CCAAAGCCAGATCGAGACGGAGAGGGACAACACTCAGAAGAAGCCACCGAGGTCTCCCACATTAAAAGGAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054742.7 |
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| CDS GCA 72 bp | TCAAGGAGAGTAATCACAACATGGTCGTCTCGGCCTTaGCATAGCATCTCTCCTTCAAAGTGCACCAGTCCG | + |
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Preference number: 6 (lower is better) Translates to: SRRVITTWSSRP*HSISPSKCTSP Trigger: CGGACTGGTGCACTTTGAAGGAGAGATGCTATGGCAAGGCCGAGACGACCATGTTGTGATTACTCTCCTTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054742.7 |
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| CDS CCA 72 bp | ACGTGGGCTCTTCCTGTTCCATCACTTTCCAGCCTTTaGTCAGCTCAGACACCAGGTTGGTGCATTTTCTTC | + |
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Preference number: 6 (lower is better) Translates to: TWALPVPSLSSL*SAQTPGWCIFF Trigger: GAAGAAAATGCACCAACCTGGTGTCTGAGCTGACCAAAGGCTGGAAAGTGATGGAACAGGAAGAGCCCACGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054742.7 |
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| CDS CCA 72 bp | TCTCCGAAAGTAACCTGGATCTTGCCATCTCGTCTGTaGCGAGCCATTGTGCGGATAACAAAGCACAGTTCC | + |
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Preference number: 6 (lower is better) Translates to: SPKVTWILPSRL*RAIVRITKHSS Trigger: GGAACTGTGCTTTGTTATCCGCACAATGGCTCGCCACAGACGAGATGGCAAGATCCAGGTTACTTTCGGAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054742.7 |
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| CDS CAA 72 bp | CACGTGGGCTCTTCCTGTTCCATCACTTTCCAGCCTTaGGTCAGCTCAGACACCAGGTTGGTGCATTTTCTT | + |
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Preference number: 6 (lower is better) Translates to: HVGSSCSITFQP*VSSDTRLVHFL Trigger: AAGAAAATGCACCAACCTGGTGTCTGAGCTGACCAAAGGCTGGAAAGTGATGGAACAGGAAGAGCCCACGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054742.7 |
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| CDS TCA 72 bp | CTTCAAAGTGCACCAGTCCGTGTTTCCTGGCACGCATaGGGATGCCCACGACTTTATCAGAAATTCGAACAT | + |
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Preference number: 6 (lower is better) Translates to: LQSAPVRVSWHA*GCPRLYQKFEH Trigger: ATGTTCGAATTTCTGATAAAGTCGTGGGCATCCTCATGCGTGCCAGGAAACACGGACTGGTGCACTTTGAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054742.7 |
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| CDS CCA 72 bp | CTCAGACACCAGGTTGGTGCATTTTCTTCTCCGTGTTaGCGAGTCGTGACTAAGAAGGATTCTGTCAATGTC | + |
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Preference number: 6 (lower is better) Translates to: LRHQVGAFSSPC*RVVTKKDSVNV Trigger: GACATTGACAGAATCCTTCTTAGTCACGACTCGCCAACACGGAGAAGAAAATGCACCAACCTGGTGTCTGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054742.7 |
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| CDS TCA 72 bp | AGGTTGGTGCATTTTCTTCTCCGTGTTGGCGAGTCGTaGCTAAGAAGGATTCTGTCAATGTCATTCTCTGGC | + |
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Preference number: 6 (lower is better) Translates to: RLVHFLLRVGES*LRRILSMSFSG Trigger: GCCAGAGAATGACATTGACAGAATCCTTCTTAGTCACGACTCGCCAACACGGAGAAGAAAATGCACCAACCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054742.7 |
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| CDS CCA 72 bp | GTCGTGACTAAGAAGGATTCTGTCAATGTCATTCTCTaGCTGAATAGCTTCAGACACGCCGCCATCATTCTC | + |
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Preference number: 6 (lower is better) Translates to: VVTKKDSVNVIL*LNSFRHAAIIL Trigger: GAGAATGATGGCGGCGTGTCTGAAGCTATTCAGCCAGAGAATGACATTGACAGAATCCTTCTTAGTCACGAC 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054742.7 |
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| CDS CCA 72 bp | CTCCCTTTCAAGTTGTCCACTTGGCTGTATTTCCGATaGGCCTTACAGTTGAGTGTCTCAGAGTACCTGTTT | + |
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Preference number: 6 (lower is better) Translates to: LPFKLSTWLYFR*ALQLSVSEYLF Trigger: AAACAGGTACTCTGAGACACTCAACTGTAAGGCCCATCGGAAATACAGCCAAGTGGACAACTTGAAAGGGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054742.7 |
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