Pregenerated sensors for ABLIM3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032735Ensembl transcript IDs: ENSMUST00000049378.15, ENSMUST00000166783.3
Found 286 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR CCA 90 bp | ACCACGGTGTGTGAACACTTCGTGGCCGGCGTCAGCCCTGGAGACTaGGGGAAGGTCCTGAAGCAGGGAGTAGAGGCTCCTCCAGGCACC | + |
Preference number: 1 (lower is better) Translates to: TTVCEHFVAGVSPGD*GKVLKQGVEAPPGT Trigger: GGTGCCTGGAGGAGCCTCTACTCCCTGCTTCAGGACCTTCCCCCAGTCTCCAGGGCTGACGCCGGCCACGAAGTGTTCACACACCGTGGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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3UTR GCA 90 bp | GAATTCTTTACGAGGCCTCAAAGGTGCTCGCTGATTTGGGTGGATTaGCACGGACCTCCCACCGGAGGGCCCATCCGTGACCACGGTGTG | + |
Preference number: 1 (lower is better) Translates to: EFFTRPQRCSLIWVD*HGPPTGGPIRDHGV Trigger: CACACCGTGGTCACGGATGGGCCCTCCGGTGGGAGGTCCGTGGCAATCCACCCAAATCAGCGAGCACCTTTGAGGCCTCGTAAAGAATTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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3UTR TCA 90 bp | TGGATGTGTGAAGAGAATTCTTTACGAGGCCTCAAAGGTGCTCGCTaGTTTGGGTGGATTGCCACGGACCTCCCACCGGAGGGCCCATCC | + |
Preference number: 1 (lower is better) Translates to: WMCEENSLRGLKGAR*FGWIATDLPPEGPS Trigger: GGATGGGCCCTCCGGTGGGAGGTCCGTGGCAATCCACCCAAATCAGCGAGCACCTTTGAGGCCTCGTAAAGAATTCTCTTCACACATCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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3UTR CCA 90 bp | CGAGAGTCAGTCCCTGAGGCCACCGGGAAAGAACATGAGCAGTGTTaGTCAAGGCCTCATTCTGGAATCCTCTCAACAGTCACCCTTCGG | + |
Preference number: 1 (lower is better) Translates to: RESVPEATGKEHEQC*SRPHSGILSTVTLR Trigger: CCGAAGGGTGACTGTTGAGAGGATTCCAGAATGAGGCCTTGACCAACACTGCTCATGTTCTTTCCCGGTGGCCTCAGGGACTGACTCTCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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3UTR CCA 90 bp | TTTGGGGTGTGGCCTATTCTCCCTGCACAGGGTGGTGAGTGTGTCTaGTTGCTTGCTGGAGCTTATTGTGGGAACATTAGCCCTGTGGTG | + |
Preference number: 1 (lower is better) Translates to: FGVWPILPAQGGECV*LLAGAYCGNISPVV Trigger: CACCACAGGGCTAATGTTCCCACAATAAGCTCCAGCAAGCAACCAGACACACTCACCACCCTGTGCAGGGAGAATAGGCCACACCCCAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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3UTR TCA 90 bp | TTGCAGTCCCTCCGCCCCGTCACCCTTCCAATGTGCAGATTCTTCTaGTCCTTTTTGATTTCTGCTCGCATGCAACCTCTTCCAGAAGCC | + |
Preference number: 1 (lower is better) Translates to: LQSLRPVTLPMCRFF*SFLISARMQPLPEA Trigger: GGCTTCTGGAAGAGGTTGCATGCGAGCAGAAATCAAAAAGGATCAGAAGAATCTGCACATTGGAAGGGTGACGGGGCGGAGGGACTGCAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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3UTR GCA 90 bp | ACGTCACACACACTTTCTCAGGCCTCCGTCCGTCACGTTCTGCCTTaGATCCGTTACGTTACGTTACGTTACGTTACGTTACGTCTGGCA | + |
Preference number: 1 (lower is better) Translates to: TSHTLSQASVRHVLP*IRYVTLRYVTLRLA Trigger: TGCCAGACGTAACGTAACGTAACGTAACGTAACGTAACGGATGCAAGGCAGAACGTGACGGACGGAGGCCTGAGAAAGTGTGTGTGACGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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3UTR GCA 90 bp | CAGCAACGTCACACACACTTTCTCAGGCCTCCGTCCGTCACGTTCTaGCTTGCATCCGTTACGTTACGTTACGTTACGTTACGTTACGTC | + |
Preference number: 1 (lower is better) Translates to: QQRHTHFLRPPSVTF*LASVTLRYVTLRYV Trigger: GACGTAACGTAACGTAACGTAACGTAACGTAACGGATGCAAGGCAGAACGTGACGGACGGAGGCCTGAGAAAGTGTGTGTGACGTTGCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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3UTR TCA 90 bp | GCGGGTGGTAGAGGGAAGGGAAGTGCCTTTTTCCGTTTCCTACCATaGATTCTAGATTTGCATGAGGGAGTGCTTAGGACCAAGGGTGGA | + |
Preference number: 1 (lower is better) Translates to: AGGRGKGSAFFRFLP*ILDLHEGVLRTKGG Trigger: TCCACCCTTGGTCCTAAGCACTCCCTCATGCAAATCTAGAATTCATGGTAGGAAACGGAAAAAGGCACTTCCCTTCCCTCTACCACCCGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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3UTR CCA 90 bp | TCCAAGAGGGAACAGCTACCACTGATCAATGACTCAGAATTGAAGTaGGGGTGTGAGAAGGCTCTGTTCTCCCTTGTCCCAGAAAGCACG | + |
Preference number: 1 (lower is better) Translates to: SKREQLPLINDSELK*GCEKALFSLVPEST Trigger: CGTGCTTTCTGGGACAAGGGAGAACAGAGCCTTCTCACACCCCCACTTCAATTCTGAGTCATTGATCAGTGGTAGCTGTTCCCTCTTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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3UTR-3UTR CCA 90 bp | ACGTCACACACACTTTCTCAGGCCTCCGTCCGTCACGTTCTGCCTTGCATCCGTGGCCGGCGTCAGCCCTaGAGACTGGGGGAAGGTCCT | + |
Preference number: 2 (lower is better) Translates to: TSHTLSQASVRHVLPCIRGRRQP*RLGEGP Trigger: AGGACCTTCCCCCAGTCTCCAGGGCTGACGCCGGCC...ACGGATGCAAGGCAGAACGTGACGGACGGAGGCCTGAGAAAGTGTGTGTGACGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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3UTR-3UTR CCA 90 bp | ATTAAACGTCCCTTGCAGTCCCTCCGCCCCGTCACCCTTCCAATGTGCAGATTCGGCCGGCGTCAGCCCTaGAGACTGGGGGAAGGTCCT | + |
Preference number: 2 (lower is better) Translates to: IKRPLQSLRPVTLPMCRFGRRQP*RLGEGP Trigger: AGGACCTTCCCCCAGTCTCCAGGGCTGACGCCGGCC...GAATCTGCACATTGGAAGGGTGACGGGGCGGAGGGACTGCAAGGGACGTTTAAT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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3UTR-3UTR TCA 90 bp | CTTCAGCAACGTCACACACACTTTCTCAGGCCTCCGTCCGTCACGTTCTGCCTTCGGAGGGCCCATCCGTaGCCACGGTGTGTGAACACT | + |
Preference number: 2 (lower is better) Translates to: LQQRHTHFLRPPSVTFCLRRAHP*PRCVNT Trigger: AGTGTTCACACACCGTGGTCACGGATGGGCCCTCCG...AAGGCAGAACGTGACGGACGGAGGCCTGAGAAAGTGTGTGTGACGTTGCTGAAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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3UTR-3UTR TCA 90 bp | AATGACTCAGAATTGAAGTGGGGGTGTGAGAAGGCTCTGTTCTCCCTTGTCCCAGGGTGCTGGGACCACTaGGGTGGGGGAGAGGAGCCG | + |
Preference number: 2 (lower is better) Translates to: NDSELKWGCEKALFSLVPGCWDH*GGGEEP Trigger: CGGCTCCTCTCCCCCACCTCAGTGGTCCCAGCACCC...TGGGACAAGGGAGAACAGAGCCTTCTCACACCCCCACTTCAATTCTGAGTCATT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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3UTR-3UTR CCA 90 bp | ATTAAACGTCCCTTGCAGTCCCTCCGCCCCGTCACCCTTCCAATGTGCAGATTCGTCAGCCCTGGAGACTaGGGGAAGGTCCTGAAGCAG | + |
Preference number: 2 (lower is better) Translates to: IKRPLQSLRPVTLPMCRFVSPGD*GKVLKQ Trigger: CTGCTTCAGGACCTTCCCCCAGTCTCCAGGGCTGAC...GAATCTGCACATTGGAAGGGTGACGGGGCGGAGGGACTGCAAGGGACGTTTAAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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3UTR-3UTR TCA 90 bp | CGTCACACACACTTTCTCAGGCCTCCGTCCGTCACGTTCTGCCTTGCATCCGTTGGTGGGGGTCTGATATaGATGTCTTGCCCTCTAGGG | + |
Preference number: 2 (lower is better) Translates to: RHTHFLRPPSVTFCLASVGGGLI*MSCPLG Trigger: CCCTAGAGGGCAAGACATTCATATCAGACCCCCACC...AACGGATGCAAGGCAGAACGTGACGGACGGAGGCCTGAGAAAGTGTGTGTGACG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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3UTR-3UTR TCA 90 bp | ACGTCACACACACTTTCTCAGGCCTCCGTCCGTCACGTTCTGCCTTGCATCCGTCACCGGGAAAGAACATaGGCAGTGTTGGTCAAGGCC | + |
Preference number: 2 (lower is better) Translates to: TSHTLSQASVRHVLPCIRHRERT*AVLVKA Trigger: GGCCTTGACCAACACTGCTCATGTTCTTTCCCGGTG...ACGGATGCAAGGCAGAACGTGACGGACGGAGGCCTGAGAAAGTGTGTGTGACGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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3UTR CAA 90 bp | GGGGTGTGGCCTATTCTCCCTGCACAGGGTGGTGAGTGTGTCTGGTaGCTTGCTGGAGCTTATTGTGGGAACATTAGCCCTGTGGTGTGT | + |
Preference number: 2 (lower is better) Translates to: GVWPILPAQGGECVW*LAGAYCGNISPVVC Trigger: ACACACCACAGGGCTAATGTTCCCACAATAAGCTCCAGCAAGCAACCAGACACACTCACCACCCTGTGCAGGGAGAATAGGCCACACCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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3UTR-3UTR CCA 90 bp | TTGCGGGTGGTAGAGGGAAGGGAAGTGCCTTTTTCCGTTTCCTACCATGAATTCGTCAGCCCTGGAGACTaGGGGAAGGTCCTGAAGCAG | + |
Preference number: 2 (lower is better) Translates to: LRVVEGREVPFSVSYHEFVSPGD*GKVLKQ Trigger: CTGCTTCAGGACCTTCCCCCAGTCTCCAGGGCTGAC...GAATTCATGGTAGGAAACGGAAAAAGGCACTTCCCTTCCCTCTACCACCCGCAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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3UTR-3UTR CCA 90 bp | ACGTCACACACACTTTCTCAGGCCTCCGTCCGTCACGTTCTGCCTTGCATCCGTGACTCAGAATTGAAGTaGGGGTGTGAGAAGGCTCTG | + |
Preference number: 2 (lower is better) Translates to: TSHTLSQASVRHVLPCIRDSELK*GCEKAL Trigger: CAGAGCCTTCTCACACCCCCACTTCAATTCTGAGTC...ACGGATGCAAGGCAGAACGTGACGGACGGAGGCCTGAGAAAGTGTGTGTGACGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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3UTR CAA 90 bp | TCCTTTTTGATTTCTGCTCGCATGCAACCTCTTCCAGAAGCCTCCTaGGGTCTGCACCAGCTGCACACGCCTTCAGCAACGTCACACACA | + |
Preference number: 2 (lower is better) Translates to: SFLISARMQPLPEAS*GLHQLHTPSATSHT Trigger: TGTGTGTGACGTTGCTGAAGGCGTGTGCAGCTGGTGCAGACCCAAGGAGGCTTCTGGAAGAGGTTGCATGCGAGCAGAAATCAAAAAGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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3UTR-3UTR TCA 90 bp | ATCAATGACTCAGAATTGAAGTGGGGGTGTGAGAAGGCTCTGTTCTCCCTTGTCCCCTGCACAGGGTGGTaGGTGTGTCTGGTTGCTTGC | + |
Preference number: 2 (lower is better) Translates to: INDSELKWGCEKALFSLVPCTGW*VCLVAC Trigger: GCAAGCAACCAGACACACTCACCACCCTGTGCAGGG...GACAAGGGAGAACAGAGCCTTCTCACACCCCCACTTCAATTCTGAGTCATTGAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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3UTR-3UTR GCA 90 bp | TTGCGGGTGGTAGAGGGAAGGGAAGTGCCTTTTTCCGTTTCCTACCATGAATTCCTGATTTGGGTGGATTaGCACGGACCTCCCACCGGA | + |
Preference number: 2 (lower is better) Translates to: LRVVEGREVPFSVSYHEFLIWVD*HGPPTG Trigger: TCCGGTGGGAGGTCCGTGGCAATCCACCCAAATCAG...GAATTCATGGTAGGAAACGGAAAAAGGCACTTCCCTTCCCTCTACCACCCGCAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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3UTR-3UTR CCA 90 bp | CTTCAGCAACGTCACACACACTTTCTCAGGCCTCCGTCCGTCACGTTCTGCCTTAATACCTCGATGATGTaGGCTCGCCTGACAGTACAG | + |
Preference number: 2 (lower is better) Translates to: LQQRHTHFLRPPSVTFCLNTSMM*ARLTVQ Trigger: CTGTACTGTCAGGCGAGCCCACATCATCGAGGTATT...AAGGCAGAACGTGACGGACGGAGGCCTGAGAAAGTGTGTGTGACGTTGCTGAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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3UTR-3UTR CCA 90 bp | GACTCAGAATTGAAGTGGGGGTGTGAGAAGGCTCTGTTCTCCCTTGTCCCAGAAAGGAGAGCCAGTTCTTaGGGACTCAAGGTGGGACAG | + |
Preference number: 2 (lower is better) Translates to: DSELKWGCEKALFSLVPERRASS*GLKVGQ Trigger: CTGTCCCACCTTGAGTCCCCAAGAACTGGCTCTCCT...TTCTGGGACAAGGGAGAACAGAGCCTTCTCACACCCCCACTTCAATTCTGAGTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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3UTR-3UTR CCA 90 bp | CCTTGTCCCAGAAAGCACGAGAGTCAGTCCCTGAGGCCACCGGGAAAGAACATGGGAACATTAGCCCTGTaGTGTGTAGATCATCAGGCA | + |
Preference number: 2 (lower is better) Translates to: PCPRKHESQSLRPPGKNMGTLAL*CVDHQA Trigger: TGCCTGATGATCTACACACCACAGGGCTAATGTTCC...CATGTTCTTTCCCGGTGGCCTCAGGGACTGACTCTCGTGCTTTCTGGGACAAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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3UTR CAA 90 bp | TGTGGCCTATTCTCCCTGCACAGGGTGGTGAGTGTGTCTGGTTGCTaGCTGGAGCTTATTGTGGGAACATTAGCCCTGTGGTGTGTAGAT | + |
Preference number: 2 (lower is better) Translates to: CGLFSLHRVVSVSGC*LELIVGTLALWCVD Trigger: ATCTACACACCACAGGGCTAATGTTCCCACAATAAGCTCCAGCAAGCAACCAGACACACTCACCACCCTGTGCAGGGAGAATAGGCCACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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3UTR CAA 90 bp | AACGTCACACACACTTTCTCAGGCCTCCGTCCGTCACGTTCTGCCTaGCATCCGTTACGTTACGTTACGTTACGTTACGTTACGTCTGGC | + |
Preference number: 2 (lower is better) Translates to: NVTHTFSGLRPSRSA*HPLRYVTLRYVTSG Trigger: GCCAGACGTAACGTAACGTAACGTAACGTAACGTAACGGATGCAAGGCAGAACGTGACGGACGGAGGCCTGAGAAAGTGTGTGTGACGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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3UTR-3UTR CCA 90 bp | CCTTGTCCCAGAAAGCACGAGAGTCAGTCCCTGAGGCCACCGGGAAAGAACATGCTTGGGGACTCAAGGTaGGACAGATGTTTCAGTATA | + |
Preference number: 2 (lower is better) Translates to: PCPRKHESQSLRPPGKNMLGDSR*DRCFSI Trigger: TATACTGAAACATCTGTCCCACCTTGAGTCCCCAAG...CATGTTCTTTCCCGGTGGCCTCAGGGACTGACTCTCGTGCTTTCTGGGACAAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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3UTR-3UTR CCA 90 bp | ATTAAACGTCCCTTGCAGTCCCTCCGCCCCGTCACCCTTCCAATGTGCAGATTCGGAACATTAGCCCTGTaGTGTGTAGATCATCAGGCA | + |
Preference number: 2 (lower is better) Translates to: IKRPLQSLRPVTLPMCRFGTLAL*CVDHQA Trigger: TGCCTGATGATCTACACACCACAGGGCTAATGTTCC...GAATCTGCACATTGGAAGGGTGACGGGGCGGAGGGACTGCAAGGGACGTTTAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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3UTR-3UTR CCA 90 bp | ACGTCACACACACTTTCTCAGGCCTCCGTCCGTCACGTTCTGCCTTGCATCCGTTGTCTGGTTGCTTGCTaGAGCTTATTGTGGGAACAT | + |
Preference number: 2 (lower is better) Translates to: TSHTLSQASVRHVLPCIRCLVAC*SLLWEH Trigger: ATGTTCCCACAATAAGCTCCAGCAAGCAACCAGACA...ACGGATGCAAGGCAGAACGTGACGGACGGAGGCCTGAGAAAGTGTGTGTGACGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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3UTR-3UTR CCA 90 bp | CTTCAGCAACGTCACACACACTTTCTCAGGCCTCCGTCCGTCACGTTCTGCCTTGCCAAGATTTTTCTTTaGGGTGTGGCCTATTCTCCC | + |
Preference number: 2 (lower is better) Translates to: LQQRHTHFLRPPSVTFCLAKIFL*GVAYSP Trigger: GGGAGAATAGGCCACACCCCAAAGAAAAATCTTGGC...AAGGCAGAACGTGACGGACGGAGGCCTGAGAAAGTGTGTGTGACGTTGCTGAAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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3UTR-3UTR CCA 90 bp | CTTCAGCAACGTCACACACACTTTCTCAGGCCTCCGTCCGTCACGTTCTGCCTTGTCAAGGCCTCATTCTaGAATCCTCTCAACAGTCAC | + |
Preference number: 2 (lower is better) Translates to: LQQRHTHFLRPPSVTFCLVKASF*NPLNSH Trigger: GTGACTGTTGAGAGGATTCCAGAATGAGGCCTTGAC...AAGGCAGAACGTGACGGACGGAGGCCTGAGAAAGTGTGTGTGACGTTGCTGAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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3UTR CAA 90 bp | GGCATCTCCAAGAGGGAACAGCTACCACTGATCAATGACTCAGAATaGAAGTGGGGGTGTGAGAAGGCTCTGTTCTCCCTTGTCCCAGAA | + |
Preference number: 2 (lower is better) Translates to: GISKREQLPLINDSE*KWGCEKALFSLVPE Trigger: TTCTGGGACAAGGGAGAACAGAGCCTTCTCACACCCCCACTTCAATTCTGAGTCATTGATCAGTGGTAGCTGTTCCCTCTTGGAGATGCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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3UTR-3UTR CCA 90 bp | CTTCAGCAACGTCACACACACTTTCTCAGGCCTCCGTCCGTCACGTTCTGCCTTTCCCCAGTAAAAGGATaGAGTCCCTTCAGATTCCTT | + |
Preference number: 2 (lower is better) Translates to: LQQRHTHFLRPPSVTFCLSPVKG*SPFRFL Trigger: AAGGAATCTGAAGGGACTCCATCCTTTTACTGGGGA...AAGGCAGAACGTGACGGACGGAGGCCTGAGAAAGTGTGTGTGACGTTGCTGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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3UTR-3UTR CCA 90 bp | CTGGAGCTTATTGTGGGAACATTAGCCCTGTGGTGTGTAGATCATCAGGCACATAGGAGAGCCAGTTCTTaGGGACTCAAGGTGGGACAG | + |
Preference number: 2 (lower is better) Translates to: LELIVGTLALWCVDHQAHRRASS*GLKVGQ Trigger: CTGTCCCACCTTGAGTCCCCAAGAACTGGCTCTCCT...ATGTGCCTGATGATCTACACACCACAGGGCTAATGTTCCCACAATAAGCTCCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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3UTR-3UTR CCA 90 bp | CACCTTTTCAAAGGAGAGCCAGTTCTTGGGGACTCAAGGTGGGACAGATGTTTCAATACCTCGATGATGTaGGCTCGCCTGACAGTACAG | + |
Preference number: 2 (lower is better) Translates to: HLFKGEPVLGDSRWDRCFNTSMM*ARLTVQ Trigger: CTGTACTGTCAGGCGAGCCCACATCATCGAGGTATT...GAAACATCTGTCCCACCTTGAGTCCCCAAGAACTGGCTCTCCTTTGAAAAGGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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3UTR-3UTR GCA 90 bp | ACCGGGAAAGAACATGAGCAGTGTTGGTCAAGGCCTCATTCTGGAATCCTCTCAATTTGCATGAGGGAGTaGTTAGGACCAAGGGTGGAA | + |
Preference number: 2 (lower is better) Translates to: TGKEHEQCWSRPHSGILSICMRE*LGPRVE Trigger: TTCCACCCTTGGTCCTAAGCACTCCCTCATGCAAAT...TGAGAGGATTCCAGAATGAGGCCTTGACCAACACTGCTCATGTTCTTTCCCGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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3UTR-3UTR GCA 90 bp | AATGACTCAGAATTGAAGTGGGGGTGTGAGAAGGCTCTGTTCTCCCTTGTCCCAGTGTGTCTGGTTGCTTaGTGGAGCTTATTGTGGGAA | + |
Preference number: 2 (lower is better) Translates to: NDSELKWGCEKALFSLVPVCLVA*WSLLWE Trigger: TTCCCACAATAAGCTCCAGCAAGCAACCAGACACAC...TGGGACAAGGGAGAACAGAGCCTTCTCACACCCCCACTTCAATTCTGAGTCATT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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3UTR-3UTR GCA 90 bp | ACCGGGAAAGAACATGAGCAGTGTTGGTCAAGGCCTCATTCTGGAATCCTCTCAGTGTGTCTGGTTGCTTaGTGGAGCTTATTGTGGGAA | + |
Preference number: 2 (lower is better) Translates to: TGKEHEQCWSRPHSGILSVCLVA*WSLLWE Trigger: TTCCCACAATAAGCTCCAGCAAGCAACCAGACACAC...TGAGAGGATTCCAGAATGAGGCCTTGACCAACACTGCTCATGTTCTTTCCCGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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3UTR-3UTR GCA 90 bp | ATCAATGACTCAGAATTGAAGTGGGGGTGTGAGAAGGCTCTGTTCTCCCTTGTCATTTGCATGAGGGAGTaGTTAGGACCAAGGGTGGAA | + |
Preference number: 2 (lower is better) Translates to: INDSELKWGCEKALFSLVICMRE*LGPRVE Trigger: TTCCACCCTTGGTCCTAAGCACTCCCTCATGCAAAT...GACAAGGGAGAACAGAGCCTTCTCACACCCCCACTTCAATTCTGAGTCATTGAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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3UTR-3UTR CCA 90 bp | ACCGGGAAAGAACATGAGCAGTGTTGGTCAAGGCCTCATTCTGGAATCCTCTCATCCCCAGTAAAAGGATaGAGTCCCTTCAGATTCCTT | + |
Preference number: 2 (lower is better) Translates to: TGKEHEQCWSRPHSGILSSPVKG*SPFRFL Trigger: AAGGAATCTGAAGGGACTCCATCCTTTTACTGGGGA...TGAGAGGATTCCAGAATGAGGCCTTGACCAACACTGCTCATGTTCTTTCCCGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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3UTR CAA 90 bp | TCTAATGGATTGGGAAAGTTGAAAGGCGTTGGCCAAAAAGAGAAGTaGCAGGGAGGTGACATCATAAATGAGAGTACATTAAACGTCCCT | + |
Preference number: 2 (lower is better) Translates to: SNGLGKLKGVGQKEK*QGGDIINESTLNVP Trigger: AGGGACGTTTAATGTACTCTCATTTATGATGTCACCTCCCTGCAACTTCTCTTTTTGGCCAACGCCTTTCAACTTTCCCAATCCATTAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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3UTR GCA 72 bp | ACGAGGCCTCAAAGGTGCTCGCTGATTTGGGTGGATTaGCACGGACCTCCCACCGGAGGGCCCATCCGTGAC | + |
Preference number: 3 (lower is better) Translates to: TRPQRCSLIWVD*HGPPTGGPIRD Trigger: GTCACGGATGGGCCCTCCGGTGGGAGGTCCGTGGCAATCCACCCAAATCAGCGAGCACCTTTGAGGCCTCGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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3UTR CCA 72 bp | GAATTCTTTACGAGGCCTCAAAGGTGCTCGCTGATTTaGGTGGATTGCCACGGACCTCCCACCGGAGGGCCC | + |
Preference number: 3 (lower is better) Translates to: EFFTRPQRCSLI*VDCHGPPTGGP Trigger: GGGCCCTCCGGTGGGAGGTCCGTGGCAATCCACCCAAATCAGCGAGCACCTTTGAGGCCTCGTAAAGAATTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
||
3UTR GCA 72 bp | CTCGCATGCAACCTCTTCCAGAAGCCTCCTTGGGTCTaGACCAGCTGCACACGCCTTCAGCAACGTCACACA | + |
Preference number: 3 (lower is better) Translates to: LACNLFQKPPWV*TSCTRLQQRHT Trigger: TGTGTGACGTTGCTGAAGGCGTGTGCAGCTGGTGCAGACCCAAGGAGGCTTCTGGAAGAGGTTGCATGCGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
||
3UTR CCA 72 bp | TTTCTGCTCGCATGCAACCTCTTCCAGAAGCCTCCTTaGGTCTGCACCAGCTGCACACGCCTTCAGCAACGT | + |
Preference number: 3 (lower is better) Translates to: FLLACNLFQKPP*VCTSCTRLQQR Trigger: ACGTTGCTGAAGGCGTGTGCAGCTGGTGCAGACCCAAGGAGGCTTCTGGAAGAGGTTGCATGCGAGCAGAAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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3UTR TCA 72 bp | CTTTGGGGTGTGGCCTATTCTCCCTGCACAGGGTGGTaGGTGTGTCTGGTTGCTTGCTGGAGCTTATTGTGG | + |
Preference number: 3 (lower is better) Translates to: LWGVAYSPCTGW*VCLVACWSLLW Trigger: CCACAATAAGCTCCAGCAAGCAACCAGACACACTCACCACCCTGTGCAGGGAGAATAGGCCACACCCCAAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
||
3UTR CCA 72 bp | GACCAGTGGCCTAGGCCAAGATTTTTCTTTGGGGTGTaGCCTATTCTCCCTGCACAGGGTGGTGAGTGTGTC | + |
Preference number: 3 (lower is better) Translates to: DQWPRPRFFFGV*PILPAQGGECV Trigger: GACACACTCACCACCCTGTGCAGGGAGAATAGGCCACACCCCAAAGAAAAATCTTGGCCTAGGCCACTGGTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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3UTR CCA 72 bp | GTCCCTGAGGCCACCGGGAAAGAACATGAGCAGTGTTaGTCAAGGCCTCATTCTGGAATCCTCTCAACAGTC | + |
Preference number: 3 (lower is better) Translates to: VPEATGKEHEQC*SRPHSGILSTV Trigger: GACTGTTGAGAGGATTCCAGAATGAGGCCTTGACCAACACTGCTCATGTTCTTTCCCGGTGGCCTCAGGGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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3UTR-3UTR CAA 90 bp | ATTAAACGTCCCTTGCAGTCCCTCCGCCCCGTCACCCTTCCAATGTGCAGATTCGGCCAAGATTTTTCTTaGGGGTGTGGCCTATTCTCC | + |
Preference number: 3 (lower is better) Translates to: IKRPLQSLRPVTLPMCRFGQDFS*GCGLFS Trigger: GGAGAATAGGCCACACCCCAAAGAAAAATCTTGGCC...GAATCTGCACATTGGAAGGGTGACGGGGCGGAGGGACTGCAAGGGACGTTTAAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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3UTR CCA 72 bp | TGGCCTATTCTCCCTGCACAGGGTGGTGAGTGTGTCTaGTTGCTTGCTGGAGCTTATTGTGGGAACATTAGC | + |
Preference number: 3 (lower is better) Translates to: WPILPAQGGECV*LLAGAYCGNIS Trigger: GCTAATGTTCCCACAATAAGCTCCAGCAAGCAACCAGACACACTCACCACCCTGTGCAGGGAGAATAGGCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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3UTR-3UTR CAA 90 bp | GACTCAGAATTGAAGTGGGGGTGTGAGAAGGCTCTGTTCTCCCTTGTCCCAGAAGGCCAAGATTTTTCTTaGGGGTGTGGCCTATTCTCC | + |
Preference number: 3 (lower is better) Translates to: DSELKWGCEKALFSLVPEGQDFS*GCGLFS Trigger: GGAGAATAGGCCACACCCCAAAGAAAAATCTTGGCC...TTCTGGGACAAGGGAGAACAGAGCCTTCTCACACCCCCACTTCAATTCTGAGTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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3UTR TCA 72 bp | AGCATTCAGCAGGTGCTCAGGAACGGTTTGCTTTGCTaGCGTCATTTCTACACTCGCCACGTCACATCACCA | + |
Preference number: 3 (lower is better) Translates to: SIQQVLRNGLLC*RHFYTRHVTSP Trigger: TGGTGATGTGACGTGGCGAGTGTAGAAATGACGTCAGCAAAGCAAACCGTTCCTGAGCACCTGCTGAATGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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3UTR GCA 72 bp | CACACACACTTTCTCAGGCCTCCGTCCGTCACGTTCTaGCTTGCATCCGTTACGTTACGTTACGTTACGTTA | + |
Preference number: 3 (lower is better) Translates to: HTHFLRPPSVTF*LASVTLRYVTL Trigger: TAACGTAACGTAACGTAACGTAACGGATGCAAGGCAGAACGTGACGGACGGAGGCCTGAGAAAGTGTGTGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
||
3UTR GCA 72 bp | GGTGACATCATAAATGAGAGTACATTAAACGTCCCTTaGAGTCCCTCCGCCCCGTCACCCTTCCAATGTGCA | + |
Preference number: 3 (lower is better) Translates to: GDIINESTLNVP*SPSAPSPFQCA Trigger: TGCACATTGGAAGGGTGACGGGGCGGAGGGACTGCAAGGGACGTTTAATGTACTCTCATTTATGATGTCACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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3UTR TCA 72 bp | CTCCGCCCCGTCACCCTTCCAATGTGCAGATTCTTCTaGTCCTTTTTGATTTCTGCTCGCATGCAACCTCTT | + |
Preference number: 3 (lower is better) Translates to: LRPVTLPMCRFF*SFLISARMQPL Trigger: AAGAGGTTGCATGCGAGCAGAAATCAAAAAGGATCAGAAGAATCTGCACATTGGAAGGGTGACGGGGCGGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
||
3UTR GCA 72 bp | ACACTTTCTCAGGCCTCCGTCCGTCACGTTCTGCCTTaGATCCGTTACGTTACGTTACGTTACGTTACGTTA | + |
Preference number: 3 (lower is better) Translates to: TLSQASVRHVLP*IRYVTLRYVTL Trigger: TAACGTAACGTAACGTAACGTAACGTAACGGATGCAAGGCAGAACGTGACGGACGGAGGCCTGAGAAAGTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
||
3UTR CCA 72 bp | GAACAGCTACCACTGATCAATGACTCAGAATTGAAGTaGGGGTGTGAGAAGGCTCTGTTCTCCCTTGTCCCA | + |
Preference number: 3 (lower is better) Translates to: EQLPLINDSELK*GCEKALFSLVP Trigger: TGGGACAAGGGAGAACAGAGCCTTCTCACACCCCCACTTCAATTCTGAGTCATTGATCAGTGGTAGCTGTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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3UTR CCA 72 bp | CTCCTCCAGGCACCTTTTCAAAGGAGAGCCAGTTCTTaGGGACTCAAGGTGGGACAGATGTTTCAGTATAAA | + |
Preference number: 3 (lower is better) Translates to: LLQAPFQRRASS*GLKVGQMFQYK Trigger: TTTATACTGAAACATCTGTCCCACCTTGAGTCCCCAAGAACTGGCTCTCCTTTGAAAAGGTGCCTGGAGGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
||
3UTR TCA 72 bp | AGAGGGAAGGGAAGTGCCTTTTTCCGTTTCCTACCATaGATTCTAGATTTGCATGAGGGAGTGCTTAGGACC | + |
Preference number: 3 (lower is better) Translates to: RGKGSAFFRFLP*ILDLHEGVLRT Trigger: GGTCCTAAGCACTCCCTCATGCAAATCTAGAATTCATGGTAGGAAACGGAAAAAGGCACTTCCCTTCCCTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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3UTR GCA 72 bp | TCCAATGTGCAGATTCTTCTGATCCTTTTTGATTTCTaGTCGCATGCAACCTCTTCCAGAAGCCTCCTTGGG | + |
Preference number: 3 (lower is better) Translates to: SNVQILLILFDF*SHATSSRSLLG Trigger: CCCAAGGAGGCTTCTGGAAGAGGTTGCATGCGAGCAGAAATCAAAAAGGATCAGAAGAATCTGCACATTGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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3UTR CCA 72 bp | AAGAGAAGTAAGGAGCATAAAAATACCTCGATGATGTaGGCTCGCCTGACAGTACAGAAAAGCAAGTCTCAC | + |
Preference number: 3 (lower is better) Translates to: KRSKEHKNTSMM*ARLTVQKSKSH Trigger: GTGAGACTTGCTTTTCTGTACTGTCAGGCGAGCCCACATCATCGAGGTATTTTTATGCTCCTTACTTCTCTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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CDS-3UTR CCA 90 bp | GGCCGGCGTCAGCCCTGGAGACTGGGGGAAGGTCCTGAAGCAGGGAGTAGAGGCGCTGGTGGAGCTCCGTaGAGGGGTCCAAGGATCCGC | + |
Preference number: 4 (lower is better) Translates to: GRRQPWRLGEGPEAGSRGAGGAP*RGPRIR Trigger: GCGGATCCTTGGACCCCTCCACGGAGCTCCACCAGC...GCCTCTACTCCCTGCTTCAGGACCTTCCCCCAGTCTCCAGGGCTGACGCCGGCC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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CDS-3UTR CCA 90 bp | GGCCGGCGTCAGCCCTGGAGACTGGGGGAAGGTCCTGAAGCAGGGAGTAGAGGCTGGCTCGGGGCACTTTaGGGGACCCATGGTAGGTCC | + |
Preference number: 4 (lower is better) Translates to: GRRQPWRLGEGPEAGSRGWLGAL*GTHGRS Trigger: GGACCTACCATGGGTCCCCCAAAGTGCCCCGAGCCA...GCCTCTACTCCCTGCTTCAGGACCTTCCCCCAGTCTCCAGGGCTGACGCCGGCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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CDS-3UTR GCA 90 bp | GGCCGGCGTCAGCCCTGGAGACTGGGGGAAGGTCCTGAAGCAGGGAGTAGAGGCCTTCTCTGCCCTGGCTaGCTGCTTGCAGATTGGGTG | + |
Preference number: 4 (lower is better) Translates to: GRRQPWRLGEGPEAGSRGLLCPG*LLADWV Trigger: CACCCAATCTGCAAGCAGGCAGCCAGGGCAGAGAAG...GCCTCTACTCCCTGCTTCAGGACCTTCCCCCAGTCTCCAGGGCTGACGCCGGCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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CDS-3UTR TCA 90 bp | GGCCGGCGTCAGCCCTGGAGACTGGGGGAAGGTCCTGAAGCAGGGAGTAGAGGCCCAAGACCCTGCCACTaGTGTACCGGTCACAAGTCT | + |
Preference number: 4 (lower is better) Translates to: GRRQPWRLGEGPEAGSRGPRPCH*CTGHKS Trigger: AGACTTGTGACCGGTACATCAGTGGCAGGGTCTTGG...GCCTCTACTCCCTGCTTCAGGACCTTCCCCCAGTCTCCAGGGCTGACGCCGGCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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CDS-3UTR CCA 90 bp | CGTCACACACACTTTCTCAGGCCTCCGTCCGTCACGTTCTGCCTTGCATCCGTTGGGCCTCCCGACTGCTaGTGGAGCTCCGTGGAGGGG | + |
Preference number: 4 (lower is better) Translates to: RHTHFLRPPSVTFCLASVGPPDC*WSSVEG Trigger: CCCCTCCACGGAGCTCCACCAGCAGTCGGGAGGCCC...AACGGATGCAAGGCAGAACGTGACGGACGGAGGCCTGAGAAAGTGTGTGTGACG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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CDS-3UTR CCA 90 bp | CTTCAGCAACGTCACACACACTTTCTCAGGCCTCCGTCCGTCACGTTCTGCCTTGGGCCTCCCGACTGCTaGTGGAGCTCCGTGGAGGGG | + |
Preference number: 4 (lower is better) Translates to: LQQRHTHFLRPPSVTFCLGPPDC*WSSVEG Trigger: CCCCTCCACGGAGCTCCACCAGCAGTCGGGAGGCCC...AAGGCAGAACGTGACGGACGGAGGCCTGAGAAAGTGTGTGTGACGTTGCTGAAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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CDS-3UTR GCA 90 bp | GCAGGGAGTAGAGGCTCCTCCAGGCACCTTTTCAAAGGAGAGCCAGTTCTTGGGCTGGAGGCCCGCCTCTaGCGGAGGTCCAGGTTCTCA | + |
Preference number: 4 (lower is better) Translates to: AGSRGSSRHLFKGEPVLGLEARL*RRSRFS Trigger: TGAGAACCTGGACCTCCGGCAGAGGCGGGCCTCCAG...CCCAAGAACTGGCTCTCCTTTGAAAAGGTGCCTGGAGGAGCCTCTACTCCCTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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CDS-3UTR GCA 90 bp | ACGTCACACACACTTTCTCAGGCCTCCGTCCGTCACGTTCTGCCTTGCATCCGTCTGGAGGCCCGCCTCTaGCGGAGGTCCAGGTTCTCA | + |
Preference number: 4 (lower is better) Translates to: TSHTLSQASVRHVLPCIRLEARL*RRSRFS Trigger: TGAGAACCTGGACCTCCGGCAGAGGCGGGCCTCCAG...ACGGATGCAAGGCAGAACGTGACGGACGGAGGCCTGAGAAAGTGTGTGTGACGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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CDS-3UTR CCA 90 bp | GGCCGGCGTCAGCCCTGGAGACTGGGGGAAGGTCCTGAAGCAGGGAGTAGAGGCATGACGCTACAGGTCTaGCATTTGAAACAGCTGACG | + |
Preference number: 4 (lower is better) Translates to: GRRQPWRLGEGPEAGSRGMTLQV*HLKQLT Trigger: CGTCAGCTGTTTCAAATGCCAGACCTGTAGCGTCAT...GCCTCTACTCCCTGCTTCAGGACCTTCCCCCAGTCTCCAGGGCTGACGCCGGCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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CDS-3UTR CCA 90 bp | ATTAAACGTCCCTTGCAGTCCCTCCGCCCCGTCACCCTTCCAATGTGCAGATTCGCTGGTGGAGCTCCGTaGAGGGGTCCAAGGATCCGC | + |
Preference number: 4 (lower is better) Translates to: IKRPLQSLRPVTLPMCRFAGGAP*RGPRIR Trigger: GCGGATCCTTGGACCCCTCCACGGAGCTCCACCAGC...GAATCTGCACATTGGAAGGGTGACGGGGCGGAGGGACTGCAAGGGACGTTTAAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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CDS-3UTR TCA 90 bp | ACGTCACACACACTTTCTCAGGCCTCCGTCCGTCACGTTCTGCCTTGCATCCGTGAGGCTCGTAGGAAATaGGGTCGGGGCGTTGCACCT | + |
Preference number: 4 (lower is better) Translates to: TSHTLSQASVRHVLPCIREARRK*GRGVAP Trigger: AGGTGCAACGCCCCGACCTCATTTCCTACGAGCCTC...ACGGATGCAAGGCAGAACGTGACGGACGGAGGCCTGAGAAAGTGTGTGTGACGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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CDS-3UTR GCA 90 bp | GGCCGGCGTCAGCCCTGGAGACTGGGGGAAGGTCCTGAAGCAGGGAGTAGAGGCTCTGGAGCTTGTGCATaGTTCGGTCAAAATCCTCTT | + |
Preference number: 4 (lower is better) Translates to: GRRQPWRLGEGPEAGSRGSGACA*FGQNPL Trigger: AAGAGGATTTTGACCGAAGCATGCACAAGCTCCAGA...GCCTCTACTCCCTGCTTCAGGACCTTCCCCCAGTCTCCAGGGCTGACGCCGGCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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CDS-3UTR CCA 90 bp | CTTCAGCAACGTCACACACACTTTCTCAGGCCTCCGTCCGTCACGTTCTGCCTTGCGAGCGGGAGAAGGTaGGAGACATGCCTTGCCGAC | + |
Preference number: 4 (lower is better) Translates to: LQQRHTHFLRPPSVTFCLASGRR*ETCLAD Trigger: GTCGGCAAGGCATGTCTCCCACCTTCTCCCGCTCGC...AAGGCAGAACGTGACGGACGGAGGCCTGAGAAAGTGTGTGTGACGTTGCTGAAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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CDS-3UTR TCA 90 bp | CCTTGTCCCAGAAAGCACGAGAGTCAGTCCCTGAGGCCACCGGGAAAGAACATGTCTCCTCCCCCTCAGTaGACATCTGGTGGCAGCGTA | + |
Preference number: 4 (lower is better) Translates to: PCPRKHESQSLRPPGKNMSPPPQ*TSGGSV Trigger: TACGCTGCCACCAGATGTTCACTGAGGGGGAGGAGA...CATGTTCTTTCCCGGTGGCCTCAGGGACTGACTCTCGTGCTTTCTGGGACAAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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CDS-3UTR TCA 90 bp | CCTTGTCCCAGAAAGCACGAGAGTCAGTCCCTGAGGCCACCGGGAAAGAACATGTTCCTCTCCTCCAGATaGGAACCTTCTGGCTCGGGG | + |
Preference number: 4 (lower is better) Translates to: PCPRKHESQSLRPPGKNMFLSSR*EPSGSG Trigger: CCCCGAGCCAGAAGGTTCTCATCTGGAGGAGAGGAA...CATGTTCTTTCCCGGTGGCCTCAGGGACTGACTCTCGTGCTTTCTGGGACAAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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CDS-3UTR TCA 90 bp | CGTCACACACACTTTCTCAGGCCTCCGTCCGTCACGTTCTGCCTTGCATCCGTTCTCGCATGCCCCAGTTaGCTGCGTTCATGCTGTCGT | + |
Preference number: 4 (lower is better) Translates to: RHTHFLRPPSVTFCLASVLACPS*LRSCCR Trigger: ACGACAGCATGAACGCAGTCAACTGGGGCATGCGAG...AACGGATGCAAGGCAGAACGTGACGGACGGAGGCCTGAGAAAGTGTGTGTGACG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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CDS-3UTR GCA 90 bp | GCAGGGAGTAGAGGCTCCTCCAGGCACCTTTTCAAAGGAGAGCCAGTTCTTGGGCCCTGGCTGCCTGCTTaGAGATTGGGTGCCAAACCT | + |
Preference number: 4 (lower is better) Translates to: AGSRGSSRHLFKGEPVLGPWLPA*RLGAKP Trigger: AGGTTTGGCACCCAATCTGCAAGCAGGCAGCCAGGG...CCCAAGAACTGGCTCTCCTTTGAAAAGGTGCCTGGAGGAGCCTCTACTCCCTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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CDS-3UTR GCA 90 bp | CGTCACACACACTTTCTCAGGCCTCCGTCCGTCACGTTCTGCCTTGCATCCGTTCCCTGGCTGCCTGCTTaGAGATTGGGTGCCAAACCT | + |
Preference number: 4 (lower is better) Translates to: RHTHFLRPPSVTFCLASVPWLPA*RLGAKP Trigger: AGGTTTGGCACCCAATCTGCAAGCAGGCAGCCAGGG...AACGGATGCAAGGCAGAACGTGACGGACGGAGGCCTGAGAAAGTGTGTGTGACG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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CDS-3UTR GCA 90 bp | TCTGCACCAGCTGCACACGCCTTCAGCAACGTCACACACACTTTCTCAGGCCTCTCTGCCCTGGCTGCCTaGTTGCAGATTGGGTGCCAA | + |
Preference number: 4 (lower is better) Translates to: SAPAAHAFSNVTHTFSGLSALAA*LQIGCQ Trigger: TTGGCACCCAATCTGCAAGCAGGCAGCCAGGGCAGA...GAGGCCTGAGAAAGTGTGTGTGACGTTGCTGAAGGCGTGTGCAGCTGGTGCAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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CDS-3UTR GCA 90 bp | CGTCACACACACTTTCTCAGGCCTCCGTCCGTCACGTTCTGCCTTGCATCCGTTTCTGCCCTGGCTGCCTaGTTGCAGATTGGGTGCCAA | + |
Preference number: 4 (lower is better) Translates to: RHTHFLRPPSVTFCLASVSALAA*LQIGCQ Trigger: TTGGCACCCAATCTGCAAGCAGGCAGCCAGGGCAGA...AACGGATGCAAGGCAGAACGTGACGGACGGAGGCCTGAGAAAGTGTGTGTGACG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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CDS-3UTR CCA 90 bp | CCTTGTCCCAGAAAGCACGAGAGTCAGTCCCTGAGGCCACCGGGAAAGAACATGCAGATGAGAACCTTCTaGCTCGGGGCACTTTGGGGG | + |
Preference number: 4 (lower is better) Translates to: PCPRKHESQSLRPPGKNMQMRTF*LGALWG Trigger: CCCCCAAAGTGCCCCGAGCCAGAAGGTTCTCATCTG...CATGTTCTTTCCCGGTGGCCTCAGGGACTGACTCTCGTGCTTTCTGGGACAAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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3UTR CAA 72 bp | AGAATTCTTTACGAGGCCTCAAAGGTGCTCGCTGATTaGGGTGGATTGCCACGGACCTCCCACCGGAGGGCC | + |
Preference number: 4 (lower is better) Translates to: RILYEASKVLAD*GGLPRTSHRRA Trigger: GGCCCTCCGGTGGGAGGTCCGTGGCAATCCACCCAAATCAGCGAGCACCTTTGAGGCCTCGTAAAGAATTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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CDS-3UTR TCA 90 bp | AATGACTCAGAATTGAAGTGGGGGTGTGAGAAGGCTCTGTTCTCCCTTGTCCCAAGCGGTAGCACTGGATaGCATTGGAGCCGCCCCGGG | + |
Preference number: 4 (lower is better) Translates to: NDSELKWGCEKALFSLVPSGSTG*HWSRPG Trigger: CCCGGGGCGGCTCCAATGTCATCCAGTGCTACCGCT...TGGGACAAGGGAGAACAGAGCCTTCTCACACCCCCACTTCAATTCTGAGTCATT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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CDS-3UTR TCA 90 bp | GCAGGGAGTAGAGGCTCCTCCAGGCACCTTTTCAAAGGAGAGCCAGTTCTTGGGCCAAGACCCTGCCACTaGTGTACCGGTCACAAGTCT | + |
Preference number: 4 (lower is better) Translates to: AGSRGSSRHLFKGEPVLGPRPCH*CTGHKS Trigger: AGACTTGTGACCGGTACATCAGTGGCAGGGTCTTGG...CCCAAGAACTGGCTCTCCTTTGAAAAGGTGCCTGGAGGAGCCTCTACTCCCTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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CDS-3UTR TCA 90 bp | ATTAAACGTCCCTTGCAGTCCCTCCGCCCCGTCACCCTTCCAATGTGCAGATTCATGTCCGCCTGTGCTTaGGCTTCTTCTCTGCCCTGG | + |
Preference number: 4 (lower is better) Translates to: IKRPLQSLRPVTLPMCRFMSACA*ASSLPW Trigger: CCAGGGCAGAGAAGAAGCTCAAGCACAGGCGGACAT...GAATCTGCACATTGGAAGGGTGACGGGGCGGAGGGACTGCAAGGGACGTTTAAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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CDS-3UTR TCA 90 bp | TCTGCACCAGCTGCACACGCCTTCAGCAACGTCACACACACTTTCTCAGGCCTCCCTGTAGGCAGGCAGTaGGGCAGATTTGGAGATGAG | + |
Preference number: 4 (lower is better) Translates to: SAPAAHAFSNVTHTFSGLPVGRQ*GRFGDE Trigger: CTCATCTCCAAATCTGCCTCACTGCCTGCCTACAGG...GAGGCCTGAGAAAGTGTGTGTGACGTTGCTGAAGGCGTGTGCAGCTGGTGCAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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CDS-3UTR TCA 90 bp | GTGGGCTCGCCTGACAGTACAGAAAAGCAAGTCTCACGGCAGGCAGCATGTTGTCTCGCATGCCCCAGTTaGCTGCGTTCATGCTGTCGT | + |
Preference number: 4 (lower is better) Translates to: VGSPDSTEKQVSRQAACCLACPS*LRSCCR Trigger: ACGACAGCATGAACGCAGTCAACTGGGGCATGCGAG...ACAACATGCTGCCTGCCGTGAGACTTGCTTTTCTGTACTGTCAGGCGAGCCCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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CDS-3UTR GCA 90 bp | CCTTGTCCCAGAAAGCACGAGAGTCAGTCCCTGAGGCCACCGGGAAAGAACATGGTAGTGTTTCCCTCCTaGCTCCAAGACCCTGCCACT | + |
Preference number: 4 (lower is better) Translates to: PCPRKHESQSLRPPGKNMVVFPS*LQDPAT Trigger: AGTGGCAGGGTCTTGGAGGCAGGAGGGAAACACTAC...CATGTTCTTTCCCGGTGGCCTCAGGGACTGACTCTCGTGCTTTCTGGGACAAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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CDS-3UTR GCA 90 bp | CCTTGTCCCAGAAAGCACGAGAGTCAGTCCCTGAGGCCACCGGGAAAGAACATGCTTGAGCTTCTTCTCTaGCCTGGCTGCCTGCTTGCA | + |
Preference number: 4 (lower is better) Translates to: PCPRKHESQSLRPPGKNMLELLL*PGCLLA Trigger: TGCAAGCAGGCAGCCAGGGCAGAGAAGAAGCTCAAG...CATGTTCTTTCCCGGTGGCCTCAGGGACTGACTCTCGTGCTTTCTGGGACAAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
||
CDS-3UTR CCA 90 bp | ACGTCACACACACTTTCTCAGGCCTCCGTCCGTCACGTTCTGCCTTGCATCCGTAAGAAGAAGCCCGACTaGGCCAGGCCACATCCACAT | + |
Preference number: 4 (lower is better) Translates to: TSHTLSQASVRHVLPCIRKKKPD*ARPHPH Trigger: ATGTGGATGTGGCCTGGCCCAGTCGGGCTTCTTCTT...ACGGATGCAAGGCAGAACGTGACGGACGGAGGCCTGAGAAAGTGTGTGTGACGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
||
CDS-3UTR CCA 90 bp | ACCGGGAAAGAACATGAGCAGTGTTGGTCAAGGCCTCATTCTGGAATCCTCTCACAATGTAGCCAGGGCTaGAGGCCCGCCTCTGCCGGA | + |
Preference number: 4 (lower is better) Translates to: TGKEHEQCWSRPHSGILSQCSQG*RPASAG Trigger: TCCGGCAGAGGCGGGCCTCCAGCCCTGGCTACATTG...TGAGAGGATTCCAGAATGAGGCCTTGACCAACACTGCTCATGTTCTTTCCCGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
||
CDS-3UTR CCA 90 bp | CGTCACACACACTTTCTCAGGCCTCCGTCCGTCACGTTCTGCCTTGCATCCGTTAGCCTGGTAAGAGGTTaGCGTGGAGGACCTCACATC | + |
Preference number: 4 (lower is better) Translates to: RHTHFLRPPSVTFCLASVSLVRG*RGGPHI Trigger: GATGTGAGGTCCTCCACGCCAACCTCTTACCAGGCT...AACGGATGCAAGGCAGAACGTGACGGACGGAGGCCTGAGAAAGTGTGTGTGACG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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CDS-3UTR CCA 90 bp | GCTCGCCTGACAGTACAGAAAAGCAAGTCTCACGGCAGGCAGCATGTTGTGTCCACATCTCATAGCCAGTaGTGTGCAGGGCCTCCCGAC | + |
Preference number: 4 (lower is better) Translates to: ARLTVQKSKSHGRQHVVSTSHSQ*CAGPPD Trigger: GTCGGGAGGCCCTGCACACCACTGGCTATGAGATGT...GGACACAACATGCTGCCTGCCGTGAGACTTGCTTTTCTGTACTGTCAGGCGAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
||
CDS-3UTR CCA 90 bp | CTTCAGCAACGTCACACACACTTTCTCAGGCCTCCGTCCGTCACGTTCTGCCTTACATCTCATAGCCAGTaGTGTGCAGGGCCTCCCGAC | + |
Preference number: 4 (lower is better) Translates to: LQQRHTHFLRPPSVTFCLTSHSQ*CAGPPD Trigger: GTCGGGAGGCCCTGCACACCACTGGCTATGAGATGT...AAGGCAGAACGTGACGGACGGAGGCCTGAGAAAGTGTGTGTGACGTTGCTGAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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3UTR CAA 72 bp | CCTCTAGGGACCAGTGGCCTAGGCCAAGATTTTTCTTaGGGGTGTGGCCTATTCTCCCTGCACAGGGTGGTG | + |
Preference number: 4 (lower is better) Translates to: PLGTSGLGQDFS*GCGLFSLHRVV Trigger: CACCACCCTGTGCAGGGAGAATAGGCCACACCCCAAAGAAAAATCTTGGCCTAGGCCACTGGTCCCTAGAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
||
3UTR CAA 72 bp | ATTTCTGCTCGCATGCAACCTCTTCCAGAAGCCTCCTaGGGTCTGCACCAGCTGCACACGCCTTCAGCAACG | + |
Preference number: 4 (lower is better) Translates to: ISARMQPLPEAS*GLHQLHTPSAT Trigger: CGTTGCTGAAGGCGTGTGCAGCTGGTGCAGACCCAAGGAGGCTTCTGGAAGAGGTTGCATGCGAGCAGAAAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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CDS-3UTR TCA 90 bp | ATTAAACGTCCCTTGCAGTCCCTCCGCCCCGTCACCCTTCCAATGTGCAGATTCCTTGCTGCTGGTCATTaGCTGGGAGCACGTCTGACA | + |
Preference number: 4 (lower is better) Translates to: IKRPLQSLRPVTLPMCRFLAAGH*LGARLT Trigger: TGTCAGACGTGCTCCCAGTCAATGACCAGCAGCAAG...GAATCTGCACATTGGAAGGGTGACGGGGCGGAGGGACTGCAAGGGACGTTTAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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CDS-3UTR TCA 90 bp | GTGGGCTCGCCTGACAGTACAGAAAAGCAAGTCTCACGGCAGGCAGCATGTTGTCTTGCTGCTGGTCATTaGCTGGGAGCACGTCTGACA | + |
Preference number: 4 (lower is better) Translates to: VGSPDSTEKQVSRQAACCLAAGH*LGARLT Trigger: TGTCAGACGTGCTCCCAGTCAATGACCAGCAGCAAG...ACAACATGCTGCCTGCCGTGAGACTTGCTTTTCTGTACTGTCAGGCGAGCCCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
||
CDS-3UTR TCA 90 bp | GTGGGCTCGCCTGACAGTACAGAAAAGCAAGTCTCACGGCAGGCAGCATGTTGTGTCAGCCAGGTAGTGTaGACGAGGGGAGCCATTGAA | + |
Preference number: 4 (lower is better) Translates to: VGSPDSTEKQVSRQAACCVSQVV*TRGAIE Trigger: TTCAATGGCTCCCCTCGTTCACACTACCTGGCTGAC...ACAACATGCTGCCTGCCGTGAGACTTGCTTTTCTGTACTGTCAGGCGAGCCCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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CDS-3UTR TCA 90 bp | GCAGGGAGTAGAGGCTCCTCCAGGCACCTTTTCAAAGGAGAGCCAGTTCTTGGGAGGCAGATTTGGAGATaGGGGGATCACTGTCAGCCA | + |
Preference number: 4 (lower is better) Translates to: AGSRGSSRHLFKGEPVLGRQIWR*GDHCQP Trigger: TGGCTGACAGTGATCCCCTCATCTCCAAATCTGCCT...CCCAAGAACTGGCTCTCCTTTGAAAAGGTGCCTGGAGGAGCCTCTACTCCCTGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
||
CDS-3UTR GCA 90 bp | GCTCGCCTGACAGTACAGAAAAGCAAGTCTCACGGCAGGCAGCATGTTGTGTCCCTTGAGCTTCTTCTCTaGCCTGGCTGCCTGCTTGCA | + |
Preference number: 4 (lower is better) Translates to: ARLTVQKSKSHGRQHVVSLELLL*PGCLLA Trigger: TGCAAGCAGGCAGCCAGGGCAGAGAAGAAGCTCAAG...GGACACAACATGCTGCCTGCCGTGAGACTTGCTTTTCTGTACTGTCAGGCGAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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CDS-3UTR CCA 90 bp | ATTAAACGTCCCTTGCAGTCCCTCCGCCCCGTCACCCTTCCAATGTGCAGATTCTGGAAGTGGTTGTTGTaGACACGGACCACCTCCCCT | + |
Preference number: 4 (lower is better) Translates to: IKRPLQSLRPVTLPMCRFWKWLL*TRTTSP Trigger: AGGGGAGGTGGTCCGTGTCCACAACAACCACTTCCA...GAATCTGCACATTGGAAGGGTGACGGGGCGGAGGGACTGCAAGGGACGTTTAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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CDS-3UTR CCA 90 bp | ACGTCACACACACTTTCTCAGGCCTCCGTCCGTCACGTTCTGCCTTGCATCCGTCATCGGATGTGGAAGTaGTTGTTGTGGACACGGACC | + |
Preference number: 4 (lower is better) Translates to: TSHTLSQASVRHVLPCIRHRMWK*LLWTRT Trigger: GGTCCGTGTCCACAACAACCACTTCCACATCCGATG...ACGGATGCAAGGCAGAACGTGACGGACGGAGGCCTGAGAAAGTGTGTGTGACGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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CDS-3UTR CCA 90 bp | GTGGGCTCGCCTGACAGTACAGAAAAGCAAGTCTCACGGCAGGCAGCATGTTGTAAGAAGAAGCCCGACTaGGCCAGGCCACATCCACAT | + |
Preference number: 4 (lower is better) Translates to: VGSPDSTEKQVSRQAACCKKKPD*ARPHPH Trigger: ATGTGGATGTGGCCTGGCCCAGTCGGGCTTCTTCTT...ACAACATGCTGCCTGCCGTGAGACTTGCTTTTCTGTACTGTCAGGCGAGCCCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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CDS-3UTR CCA 90 bp | AATGACTCAGAATTGAAGTGGGGGTGTGAGAAGGCTCTGTTCTCCCTTGTCCCAGCGAGCGGGAGAAGGTaGGAGACATGCCTTGCCGAC | + |
Preference number: 4 (lower is better) Translates to: NDSELKWGCEKALFSLVPASGRR*ETCLAD Trigger: GTCGGCAAGGCATGTCTCCCACCTTCTCCCGCTCGC...TGGGACAAGGGAGAACAGAGCCTTCTCACACCCCCACTTCAATTCTGAGTCATT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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CDS-3UTR CCA 90 bp | ACGTCACACACACTTTCTCAGGCCTCCGTCCGTCACGTTCTGCCTTGCATCCGTAGCATAGTAGGGGTCTaGCGAGTAGGCTGGGCTATA | + |
Preference number: 4 (lower is better) Translates to: TSHTLSQASVRHVLPCIRSIVGV*RVGWAI Trigger: TATAGCCCAGCCTACTCGCCAGACCCCTACTATGCT...ACGGATGCAAGGCAGAACGTGACGGACGGAGGCCTGAGAAAGTGTGTGTGACGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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CDS-3UTR CCA 90 bp | AATGACTCAGAATTGAAGTGGGGGTGTGAGAAGGCTCTGTTCTCCCTTGTCCCATGGCTCGGGGCACTTTaGGGGACCCATGGTAGGTCC | + |
Preference number: 4 (lower is better) Translates to: NDSELKWGCEKALFSLVPWLGAL*GTHGRS Trigger: GGACCTACCATGGGTCCCCCAAAGTGCCCCGAGCCA...TGGGACAAGGGAGAACAGAGCCTTCTCACACCCCCACTTCAATTCTGAGTCATT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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CDS-3UTR TCA 90 bp | ATTAAACGTCCCTTGCAGTCCCTCCGCCCCGTCACCCTTCCAATGTGCAGATTCTGTACTCCTGGTTCTTaGAGAAGAAGCCCGACTGGG | + |
Preference number: 4 (lower is better) Translates to: IKRPLQSLRPVTLPMCRFCTPGS*RRSPTG Trigger: CCCAGTCGGGCTTCTTCTTCAAGAACCAGGAGTACA...GAATCTGCACATTGGAAGGGTGACGGGGCGGAGGGACTGCAAGGGACGTTTAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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CDS-3UTR TCA 90 bp | CGTCACACACACTTTCTCAGGCCTCCGTCCGTCACGTTCTGCCTTGCATCCGTTGTCCAGTGCCAGAAGTaGCTGGCCATGTTTAATCTC | + |
Preference number: 4 (lower is better) Translates to: RHTHFLRPPSVTFCLASVVQCQK*LAMFNL Trigger: GAGATTAAACATGGCCAGTCACTTCTGGCACTGGAC...AACGGATGCAAGGCAGAACGTGACGGACGGAGGCCTGAGAAAGTGTGTGTGACG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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CDS-3UTR TCA 90 bp | AATGACTCAGAATTGAAGTGGGGGTGTGAGAAGGCTCTGTTCTCCCTTGTCCCAGAGGCTCGTAGGAAATaGGGTCGGGGCGTTGCACCT | + |
Preference number: 4 (lower is better) Translates to: NDSELKWGCEKALFSLVPEARRK*GRGVAP Trigger: AGGTGCAACGCCCCGACCTCATTTCCTACGAGCCTC...TGGGACAAGGGAGAACAGAGCCTTCTCACACCCCCACTTCAATTCTGAGTCATT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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CDS-3UTR TCA 90 bp | ACGTCACACACACTTTCTCAGGCCTCCGTCCGTCACGTTCTGCCTTGCATCCGTCCAATACTCAGACTCTaGAGCATAGTAGGGGTCTGG | + |
Preference number: 4 (lower is better) Translates to: TSHTLSQASVRHVLPCIRPILRL*SIVGVW Trigger: CCAGACCCCTACTATGCTTCAGAGTCTGAGTATTGG...ACGGATGCAAGGCAGAACGTGACGGACGGAGGCCTGAGAAAGTGTGTGTGACGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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CDS-3UTR GCA 90 bp | CCTTGTCCCAGAAAGCACGAGAGTCAGTCCCTGAGGCCACCGGGAAAGAACATGGTTGGTAGTCCTGGGTaGAGATGTACTCCTGGTTCT | + |
Preference number: 4 (lower is better) Translates to: PCPRKHESQSLRPPGKNMVGSPG*RCTPGS Trigger: AGAACCAGGAGTACATCTGCACCCAGGACTACCAAC...CATGTTCTTTCCCGGTGGCCTCAGGGACTGACTCTCGTGCTTTCTGGGACAAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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CDS-3UTR GCA 90 bp | ATTAAACGTCCCTTGCAGTCCCTCCGCCCCGTCACCCTTCCAATGTGCAGATTCCATGCCCCAGTTGACTaGGTTCATGCTGTCGTAGTG | + |
Preference number: 4 (lower is better) Translates to: IKRPLQSLRPVTLPMCRFHAPVD*VHAVVV Trigger: CACTACGACAGCATGAACGCAGTCAACTGGGGCATG...GAATCTGCACATTGGAAGGGTGACGGGGCGGAGGGACTGCAAGGGACGTTTAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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CDS-3UTR CCA 90 bp | TCTGCACCAGCTGCACACGCCTTCAGCAACGTCACACACACTTTCTCAGGCCTCTCAGTGAACATCTGGTaGCAGCGTACACATCTGGCA | + |
Preference number: 4 (lower is better) Translates to: SAPAAHAFSNVTHTFSGLSVNIW*QRTHLA Trigger: TGCCAGATGTGTACGCTGCCACCAGATGTTCACTGA...GAGGCCTGAGAAAGTGTGTGTGACGTTGCTGAAGGCGTGTGCAGCTGGTGCAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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CDS-3UTR CCA 90 bp | ACGTCACACACACTTTCTCAGGCCTCCGTCCGTCACGTTCTGCCTTGCATCCGTGGATGTGAAAGTGCTTaGGAGCCTGGTAAGAGGTTG | + |
Preference number: 4 (lower is better) Translates to: TSHTLSQASVRHVLPCIRGCESA*EPGKRL Trigger: CAACCTCTTACCAGGCTCCCAAGCACTTTCACATCC...ACGGATGCAAGGCAGAACGTGACGGACGGAGGCCTGAGAAAGTGTGTGTGACGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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CDS-3UTR CCA 90 bp | CGTCACACACACTTTCTCAGGCCTCCGTCCGTCACGTTCTGCCTTGCATCCGTTGGATGTGAAAGTGCTTaGGAGCCTGGTAAGAGGTTG | + |
Preference number: 4 (lower is better) Translates to: RHTHFLRPPSVTFCLASVGCESA*EPGKRL Trigger: CAACCTCTTACCAGGCTCCCAAGCACTTTCACATCC...AACGGATGCAAGGCAGAACGTGACGGACGGAGGCCTGAGAAAGTGTGTGTGACG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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CDS-3UTR CCA 90 bp | ACGTCACACACACTTTCTCAGGCCTCCGTCCGTCACGTTCTGCCTTGCATCCGTGGTTCCTTCCTCTTGTaGTCACCAGTAGCAGCTCAT | + |
Preference number: 4 (lower is better) Translates to: TSHTLSQASVRHVLPCIRGSFLL*SPVAAH Trigger: ATGAGCTGCTACTGGTGACCACAAGAGGAAGGAACC...ACGGATGCAAGGCAGAACGTGACGGACGGAGGCCTGAGAAAGTGTGTGTGACGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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3UTR CAA 72 bp | TTCTCCCTGCACAGGGTGGTGAGTGTGTCTGGTTGCTaGCTGGAGCTTATTGTGGGAACATTAGCCCTGTGG | + |
Preference number: 4 (lower is better) Translates to: FSLHRVVSVSGC*LELIVGTLALW Trigger: CCACAGGGCTAATGTTCCCACAATAAGCTCCAGCAAGCAACCAGACACACTCACCACCCTGTGCAGGGAGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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CDS-3UTR TCA 90 bp | TTGCGGGTGGTAGAGGGAAGGGAAGTGCCTTTTTCCGTTTCCTACCATGAATTCTCTCCTCCCCCTCAGTaGACATCTGGTGGCAGCGTA | + |
Preference number: 4 (lower is better) Translates to: LRVVEGREVPFSVSYHEFSPPPQ*TSGGSV Trigger: TACGCTGCCACCAGATGTTCACTGAGGGGGAGGAGA...GAATTCATGGTAGGAAACGGAAAAAGGCACTTCCCTTCCCTCTACCACCCGCAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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CDS-3UTR TCA 90 bp | AATGACTCAGAATTGAAGTGGGGGTGTGAGAAGGCTCTGTTCTCCCTTGTCCCAATGTCCGCCTGTGCTTaGGCTTCTTCTCTGCCCTGG | + |
Preference number: 4 (lower is better) Translates to: NDSELKWGCEKALFSLVPMSACA*ASSLPW Trigger: CCAGGGCAGAGAAGAAGCTCAAGCACAGGCGGACAT...TGGGACAAGGGAGAACAGAGCCTTCTCACACCCCCACTTCAATTCTGAGTCATT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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CDS-3UTR TCA 90 bp | AATGACTCAGAATTGAAGTGGGGGTGTGAGAAGGCTCTGTTCTCCCTTGTCCCATTCCTCTCCTCCAGATaGGAACCTTCTGGCTCGGGG | + |
Preference number: 4 (lower is better) Translates to: NDSELKWGCEKALFSLVPFLSSR*EPSGSG Trigger: CCCCGAGCCAGAAGGTTCTCATCTGGAGGAGAGGAA...TGGGACAAGGGAGAACAGAGCCTTCTCACACCCCCACTTCAATTCTGAGTCATT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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CDS-3UTR GCA 90 bp | CTTCAGCAACGTCACACACACTTTCTCAGGCCTCCGTCCGTCACGTTCTGCCTTGTTGGTAGTCCTGGGTaGAGATGTACTCCTGGTTCT | + |
Preference number: 4 (lower is better) Translates to: LQQRHTHFLRPPSVTFCLVGSPG*RCTPGS Trigger: AGAACCAGGAGTACATCTGCACCCAGGACTACCAAC...AAGGCAGAACGTGACGGACGGAGGCCTGAGAAAGTGTGTGTGACGTTGCTGAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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CDS-3UTR CCA 90 bp | ACGTCACACACACTTTCTCAGGCCTCCGTCCGTCACGTTCTGCCTTGCATCCGTGTGCAGATGTACTCCTaGTTCTTGAAGAAGAAGCCC | + |
Preference number: 4 (lower is better) Translates to: TSHTLSQASVRHVLPCIRVQMYS*FLKKKP Trigger: GGGCTTCTTCTTCAAGAACCAGGAGTACATCTGCAC...ACGGATGCAAGGCAGAACGTGACGGACGGAGGCCTGAGAAAGTGTGTGTGACGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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CDS-3UTR CCA 90 bp | CTTCAGCAACGTCACACACACTTTCTCAGGCCTCCGTCCGTCACGTTCTGCCTTCGTCGGAGGTGTATCTaGAATGAGGCTCGTAGGAAA | + |
Preference number: 4 (lower is better) Translates to: LQQRHTHFLRPPSVTFCLRRRCI*NEARRK Trigger: TTTCCTACGAGCCTCATTCCAGATACACCTCCGACG...AAGGCAGAACGTGACGGACGGAGGCCTGAGAAAGTGTGTGTGACGTTGCTGAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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CDS-3UTR CCA 90 bp | CTTCAGCAACGTCACACACACTTTCTCAGGCCTCCGTCCGTCACGTTCTGCCTTACATCTAATTGGCTATaGTATGGGGAGCTCCGGCCA | + |
Preference number: 4 (lower is better) Translates to: LQQRHTHFLRPPSVTFCLTSNWL*YGELRP Trigger: TGGCCGGAGCTCCCCATACCATAGCCAATTAGATGT...AAGGCAGAACGTGACGGACGGAGGCCTGAGAAAGTGTGTGTGACGTTGCTGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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CDS-3UTR CCA 90 bp | CGTCACACACACTTTCTCAGGCCTCCGTCCGTCACGTTCTGCCTTGCATCCGTTGACCTCACATCTAATTaGCTATGGTATGGGGAGCTC | + |
Preference number: 4 (lower is better) Translates to: RHTHFLRPPSVTFCLASVDLTSN*LWYGEL Trigger: GAGCTCCCCATACCATAGCCAATTAGATGTGAGGTC...AACGGATGCAAGGCAGAACGTGACGGACGGAGGCCTGAGAAAGTGTGTGTGACG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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CDS-3UTR CCA 90 bp | GTGGGCTCGCCTGACAGTACAGAAAAGCAAGTCTCACGGCAGGCAGCATGTTGTGTTACTCTCTCCAGCTaGGATGTGAAAGTGCTTGGG | + |
Preference number: 4 (lower is better) Translates to: VGSPDSTEKQVSRQAACCVTLSS*DVKVLG Trigger: CCCAAGCACTTTCACATCCCAGCTGGAGAGAGTAAC...ACAACATGCTGCCTGCCGTGAGACTTGCTTTTCTGTACTGTCAGGCGAGCCCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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CDS-3UTR CCA 90 bp | CCTTGTCCCAGAAAGCACGAGAGTCAGTCCCTGAGGCCACCGGGAAAGAACATGTGCTCTTGGTTGCTGTaGACAAATCACCATGCCGTT | + |
Preference number: 4 (lower is better) Translates to: PCPRKHESQSLRPPGKNMCSWLL*TNHHAV Trigger: AACGGCATGGTGATTTGTCCACAGCAACCAAGAGCA...CATGTTCTTTCCCGGTGGCCTCAGGGACTGACTCTCGTGCTTTCTGGGACAAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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3UTR CAA 72 bp | CCTATTCTCCCTGCACAGGGTGGTGAGTGTGTCTGGTaGCTTGCTGGAGCTTATTGTGGGAACATTAGCCCT | + |
Preference number: 4 (lower is better) Translates to: PILPAQGGECVW*LAGAYCGNISP Trigger: AGGGCTAATGTTCCCACAATAAGCTCCAGCAAGCAACCAGACACACTCACCACCCTGTGCAGGGAGAATAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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3UTR CAA 72 bp | GCTCAGCATTCAGCAGGTGCTCAGGAACGGTTTGCTTaGCTGACGTCATTTCTACACTCGCCACGTCACATC | + |
Preference number: 4 (lower is better) Translates to: AQHSAGAQERFA*LTSFLHSPRHI Trigger: GATGTGACGTGGCGAGTGTAGAAATGACGTCAGCAAAGCAAACCGTTCCTGAGCACCTGCTGAATGCTGAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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CDS-3UTR TCA 90 bp | GCTCGCCTGACAGTACAGAAAAGCAAGTCTCACGGCAGGCAGCATGTTGTGTCCCACAAGTCTCACATTTaGTGCCAAACTGGGAGTGGT | + |
Preference number: 4 (lower is better) Translates to: ARLTVQKSKSHGRQHVVSHKSHI*CQTGSG Trigger: ACCACTCCCAGTTTGGCATCAAATGTGAGACTTGTG...GGACACAACATGCTGCCTGCCGTGAGACTTGCTTTTCTGTACTGTCAGGCGAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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CDS-3UTR TCA 90 bp | CACCTTTTCAAAGGAGAGCCAGTTCTTGGGGACTCAAGGTGGGACAGATGTTTCATCCGCATAGGAGCTTaGCCGCGCCTTCATCTCTTC | + |
Preference number: 4 (lower is better) Translates to: HLFKGEPVLGDSRWDRCFIRIGA*PRLHLF Trigger: GAAGAGATGAAGGCGCGGTCAAGCTCCTATGCGGAT...GAAACATCTGTCCCACCTTGAGTCCCCAAGAACTGGCTCTCCTTTGAAAAGGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
||
CDS-3UTR TCA 90 bp | TTGCGGGTGGTAGAGGGAAGGGAAGTGCCTTTTTCCGTTTCCTACCATGAATTCGTCAGCCAGGTAGTGTaGACGAGGGGAGCCATTGAA | + |
Preference number: 4 (lower is better) Translates to: LRVVEGREVPFSVSYHEFVSQVV*TRGAIE Trigger: TTCAATGGCTCCCCTCGTTCACACTACCTGGCTGAC...GAATTCATGGTAGGAAACGGAAAAAGGCACTTCCCTTCCCTCTACCACCCGCAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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CDS-3UTR TCA 90 bp | ACCGGGAAAGAACATGAGCAGTGTTGGTCAAGGCCTCATTCTGGAATCCTCTCACCTGTAGGCAGGCAGTaGGGCAGATTTGGAGATGAG | + |
Preference number: 4 (lower is better) Translates to: TGKEHEQCWSRPHSGILSPVGRQ*GRFGDE Trigger: CTCATCTCCAAATCTGCCTCACTGCCTGCCTACAGG...TGAGAGGATTCCAGAATGAGGCCTTGACCAACACTGCTCATGTTCTTTCCCGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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CDS-3UTR GCA 90 bp | ATTAAACGTCCCTTGCAGTCCCTCCGCCCCGTCACCCTTCCAATGTGCAGATTCAGCTATCACAGCGGGTaGCATAAAGCTGTTGGTAGT | + |
Preference number: 4 (lower is better) Translates to: IKRPLQSLRPVTLPMCRFSYHSG*HKAVGS Trigger: ACTACCAACAGCTTTATGGCACCCGCTGTGATAGCT...GAATCTGCACATTGGAAGGGTGACGGGGCGGAGGGACTGCAAGGGACGTTTAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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CDS-3UTR GCA 90 bp | AATGACTCAGAATTGAAGTGGGGGTGTGAGAAGGCTCTGTTCTCCCTTGTCCCACAGCTGACGTGCCACTaGTTGTCCAGTGCCAGAAGT | + |
Preference number: 4 (lower is better) Translates to: NDSELKWGCEKALFSLVPQLTCH*LSSARS Trigger: ACTTCTGGCACTGGACAAGCAGTGGCACGTCAGCTG...TGGGACAAGGGAGAACAGAGCCTTCTCACACCCCCACTTCAATTCTGAGTCATT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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CDS-3UTR GCA 90 bp | ATCAATGACTCAGAATTGAAGTGGGGGTGTGAGAAGGCTCTGTTCTCCCTTGTCCTTCTCTGCCCTGGCTaGCTGCTTGCAGATTGGGTG | + |
Preference number: 4 (lower is better) Translates to: INDSELKWGCEKALFSLVLLCPG*LLADWV Trigger: CACCCAATCTGCAAGCAGGCAGCCAGGGCAGAGAAG...GACAAGGGAGAACAGAGCCTTCTCACACCCCCACTTCAATTCTGAGTCATTGAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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CDS-3UTR GCA 90 bp | CTTCAGCAACGTCACACACACTTTCTCAGGCCTCCGTCCGTCACGTTCTGCCTTACTCGGAGATGGTCATaGCGAAGACTTGGTAGAACT | + |
Preference number: 4 (lower is better) Translates to: LQQRHTHFLRPPSVTFCLTRRWS*RRLGRT Trigger: AGTTCTACCAAGTCTTCGGCATGACCATCTCCGAGT...AAGGCAGAACGTGACGGACGGAGGCCTGAGAAAGTGTGTGTGACGTTGCTGAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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CDS-3UTR GCA 90 bp | ATTAAACGTCCCTTGCAGTCCCTCCGCCCCGTCACCCTTCCAATGTGCAGATTCACTCGGAGATGGTCATaGCGAAGACTTGGTAGAACT | + |
Preference number: 4 (lower is better) Translates to: IKRPLQSLRPVTLPMCRFTRRWS*RRLGRT Trigger: AGTTCTACCAAGTCTTCGGCATGACCATCTCCGAGT...GAATCTGCACATTGGAAGGGTGACGGGGCGGAGGGACTGCAAGGGACGTTTAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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CDS-3UTR CCA 90 bp | GACTCAGAATTGAAGTGGGGGTGTGAGAAGGCTCTGTTCTCCCTTGTCCCAGAACATCGGATGTGGAAGTaGTTGTTGTGGACACGGACC | + |
Preference number: 4 (lower is better) Translates to: DSELKWGCEKALFSLVPEHRMWK*LLWTRT Trigger: GGTCCGTGTCCACAACAACCACTTCCACATCCGATG...TTCTGGGACAAGGGAGAACAGAGCCTTCTCACACCCCCACTTCAATTCTGAGTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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CDS-3UTR CCA 90 bp | GTGGGCTCGCCTGACAGTACAGAAAAGCAAGTCTCACGGCAGGCAGCATGTTGTGTGCAGATGTACTCCTaGTTCTTGAAGAAGAAGCCC | + |
Preference number: 4 (lower is better) Translates to: VGSPDSTEKQVSRQAACCVQMYS*FLKKKP Trigger: GGGCTTCTTCTTCAAGAACCAGGAGTACATCTGCAC...ACAACATGCTGCCTGCCGTGAGACTTGCTTTTCTGTACTGTCAGGCGAGCCCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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CDS-3UTR CCA 90 bp | AATGACTCAGAATTGAAGTGGGGGTGTGAGAAGGCTCTGTTCTCCCTTGTCCCAGCTTCTTCTCTGCCCTaGCTGCCTGCTTGCAGATTG | + |
Preference number: 4 (lower is better) Translates to: NDSELKWGCEKALFSLVPASSLP*LPACRL Trigger: CAATCTGCAAGCAGGCAGCCAGGGCAGAGAAGAAGC...TGGGACAAGGGAGAACAGAGCCTTCTCACACCCCCACTTCAATTCTGAGTCATT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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CDS-3UTR CCA 90 bp | GCTCGCCTGACAGTACAGAAAAGCAAGTCTCACGGCAGGCAGCATGTTGTGTCCGACCTCACATCTAATTaGCTATGGTATGGGGAGCTC | + |
Preference number: 4 (lower is better) Translates to: ARLTVQKSKSHGRQHVVSDLTSN*LWYGEL Trigger: GAGCTCCCCATACCATAGCCAATTAGATGTGAGGTC...GGACACAACATGCTGCCTGCCGTGAGACTTGCTTTTCTGTACTGTCAGGCGAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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CDS-3UTR CCA 90 bp | CTGGAGCTTATTGTGGGAACATTAGCCCTGTGGTGTGTAGATCATCAGGCACATCAGATGAGAACCTTCTaGCTCGGGGCACTTTGGGGG | + |
Preference number: 4 (lower is better) Translates to: LELIVGTLALWCVDHQAHQMRTF*LGALWG Trigger: CCCCCAAAGTGCCCCGAGCCAGAAGGTTCTCATCTG...ATGTGCCTGATGATCTACACACCACAGGGCTAATGTTCCCACAATAAGCTCCAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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CDS-3UTR TCA 90 bp | CTTCAGCAACGTCACACACACTTTCTCAGGCCTCCGTCCGTCACGTTCTGCCTTCACATACTTGACAAGTaGAGCATCGGATGTGGAAGT | + |
Preference number: 4 (lower is better) Translates to: LQQRHTHFLRPPSVTFCLHILDK*SIGCGS Trigger: ACTTCCACATCCGATGCTTCACTTGTCAAGTATGTG...AAGGCAGAACGTGACGGACGGAGGCCTGAGAAAGTGTGTGTGACGTTGCTGAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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CDS-3UTR TCA 90 bp | GACTCAGAATTGAAGTGGGGGTGTGAGAAGGCTCTGTTCTCCCTTGTCCCAGAAGACTGGGAGCACGTCTaGCATACACATTCTTTCCCA | + |
Preference number: 4 (lower is better) Translates to: DSELKWGCEKALFSLVPEDWEHV*HTHSFP Trigger: TGGGAAAGAATGTGTATGTCAGACGTGCTCCCAGTC...TTCTGGGACAAGGGAGAACAGAGCCTTCTCACACCCCCACTTCAATTCTGAGTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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CDS-3UTR TCA 90 bp | CACATCACCTCATGGAGCGCTGAGCTCCTCCTATTTGGATGTGTGAAGAGAATTATCCGCATAGGAGCTTaGCCGCGCCTTCATCTCTTC | + |
Preference number: 4 (lower is better) Translates to: HITSWSAELLLFGCVKRIIRIGA*PRLHLF Trigger: GAAGAGATGAAGGCGCGGTCAAGCTCCTATGCGGAT...AATTCTCTTCACACATCCAAATAGGAGGAGCTCAGCGCTCCATGAGGTGATGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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CDS-3UTR TCA 90 bp | AATGACTCAGAATTGAAGTGGGGGTGTGAGAAGGCTCTGTTCTCCCTTGTCCCAAACGAGGGGAGCCATTaGAGGACATCTCATAGCCAG | + |
Preference number: 4 (lower is better) Translates to: NDSELKWGCEKALFSLVPNEGSH*RTSHSQ Trigger: CTGGCTATGAGATGTCCTTCAATGGCTCCCCTCGTT...TGGGACAAGGGAGAACAGAGCCTTCTCACACCCCCACTTCAATTCTGAGTCATT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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CDS-3UTR GCA 90 bp | CACATCACCTCATGGAGCGCTGAGCTCCTCCTATTTGGATGTGTGAAGAGAATTGTAGTGTTTCCCTCCTaGCTCCAAGACCCTGCCACT | + |
Preference number: 4 (lower is better) Translates to: HITSWSAELLLFGCVKRIVVFPS*LQDPAT Trigger: AGTGGCAGGGTCTTGGAGGCAGGAGGGAAACACTAC...AATTCTCTTCACACATCCAAATAGGAGGAGCTCAGCGCTCCATGAGGTGATGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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CDS-3UTR GCA 90 bp | ACCGGGAAAGAACATGAGCAGTGTTGGTCAAGGCCTCATTCTGGAATCCTCTCATCAGATGTCCGCCTGTaGTTGAGCTTCTTCTCTGCC | + |
Preference number: 4 (lower is better) Translates to: TGKEHEQCWSRPHSGILSSDVRL*LSFFSA Trigger: GGCAGAGAAGAAGCTCAAGCACAGGCGGACATCTGA...TGAGAGGATTCCAGAATGAGGCCTTGACCAACACTGCTCATGTTCTTTCCCGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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CDS-3UTR GCA 90 bp | GCTCGCCTGACAGTACAGAAAAGCAAGTCTCACGGCAGGCAGCATGTTGTGTCCAACCTTGGGGAGAGCTaGCAGGTCTTTGTAATTAAG | + |
Preference number: 4 (lower is better) Translates to: ARLTVQKSKSHGRQHVVSNLGES*QVFVIK Trigger: CTTAATTACAAAGACCTGGCAGCTCTCCCCAAGGTT...GGACACAACATGCTGCCTGCCGTGAGACTTGCTTTTCTGTACTGTCAGGCGAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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CDS-3UTR GCA 90 bp | TCTGCACCAGCTGCACACGCCTTCAGCAACGTCACACACACTTTCTCAGGCCTCTGTTTTGCTCTTGGTTaGTGTGGACAAATCACCATG | + |
Preference number: 4 (lower is better) Translates to: SAPAAHAFSNVTHTFSGLCFALG*CGQITM Trigger: CATGGTGATTTGTCCACAGCAACCAAGAGCAAAACA...GAGGCCTGAGAAAGTGTGTGTGACGTTGCTGAAGGCGTGTGCAGCTGGTGCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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CDS-3UTR GCA 90 bp | GCTCGCCTGACAGTACAGAAAAGCAAGTCTCACGGCAGGCAGCATGTTGTGTCCTCTGGAGCTTGTGCATaGTTCGGTCAAAATCCTCTT | + |
Preference number: 4 (lower is better) Translates to: ARLTVQKSKSHGRQHVVSSGACA*FGQNPL Trigger: AAGAGGATTTTGACCGAAGCATGCACAAGCTCCAGA...GGACACAACATGCTGCCTGCCGTGAGACTTGCTTTTCTGTACTGTCAGGCGAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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CDS-3UTR CCA 90 bp | CTGGAGCTTATTGTGGGAACATTAGCCCTGTGGTGTGTAGATCATCAGGCACATTGGAAGTGGTTGTTGTaGACACGGACCACCTCCCCT | + |
Preference number: 4 (lower is better) Translates to: LELIVGTLALWCVDHQAHWKWLL*TRTTSP Trigger: AGGGGAGGTGGTCCGTGTCCACAACAACCACTTCCA...ATGTGCCTGATGATCTACACACCACAGGGCTAATGTTCCCACAATAAGCTCCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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CDS-3UTR CCA 90 bp | GACTCAGAATTGAAGTGGGGGTGTGAGAAGGCTCTGTTCTCCCTTGTCCCAGAATCAGTGAACATCTGGTaGCAGCGTACACATCTGGCA | + |
Preference number: 4 (lower is better) Translates to: DSELKWGCEKALFSLVPESVNIW*QRTHLA Trigger: TGCCAGATGTGTACGCTGCCACCAGATGTTCACTGA...TTCTGGGACAAGGGAGAACAGAGCCTTCTCACACCCCCACTTCAATTCTGAGTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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CDS-3UTR CCA 90 bp | CACCTTTTCAAAGGAGAGCCAGTTCTTGGGGACTCAAGGTGGGACAGATGTTTCCCCTCAGTGAACATCTaGTGGCAGCGTACACATCTG | + |
Preference number: 4 (lower is better) Translates to: HLFKGEPVLGDSRWDRCFPSVNI*WQRTHL Trigger: CAGATGTGTACGCTGCCACCAGATGTTCACTGAGGG...GAAACATCTGTCCCACCTTGAGTCCCCAAGAACTGGCTCTCCTTTGAAAAGGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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CDS-3UTR CCA 90 bp | TTGCGGGTGGTAGAGGGAAGGGAAGTGCCTTTTTCCGTTTCCTACCATGAATTCCCCTCAGTGAACATCTaGTGGCAGCGTACACATCTG | + |
Preference number: 4 (lower is better) Translates to: LRVVEGREVPFSVSYHEFPSVNI*WQRTHL Trigger: CAGATGTGTACGCTGCCACCAGATGTTCACTGAGGG...GAATTCATGGTAGGAAACGGAAAAAGGCACTTCCCTTCCCTCTACCACCCGCAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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CDS-3UTR CCA 90 bp | ACCGGGAAAGAACATGAGCAGTGTTGGTCAAGGCCTCATTCTGGAATCCTCTCAAACCAGGGGGTGAGATaGAAGTTTCAGATGTCCGCC | + |
Preference number: 4 (lower is better) Translates to: TGKEHEQCWSRPHSGILSNQGVR*KFQMSA Trigger: GGCGGACATCTGAAACTTCCATCTCACCCCCTGGTT...TGAGAGGATTCCAGAATGAGGCCTTGACCAACACTGCTCATGTTCTTTCCCGGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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CDS-3UTR CCA 90 bp | GTGGGCTCGCCTGACAGTACAGAAAAGCAAGTCTCACGGCAGGCAGCATGTTGTCTATACTTGGAGGCCTaGCTGATGTCTTCACTTGTT | + |
Preference number: 4 (lower is better) Translates to: VGSPDSTEKQVSRQAACCLYLEA*LMSSLV Trigger: AACAAGTGAAGACATCAGCCAGGCCTCCAAGTATAG...ACAACATGCTGCCTGCCGTGAGACTTGCTTTTCTGTACTGTCAGGCGAGCCCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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CDS-3UTR CCA 90 bp | TTGCGGGTGGTAGAGGGAAGGGAAGTGCCTTTTTCCGTTTCCTACCATGAATTCAGCATAGTAGGGGTCTaGCGAGTAGGCTGGGCTATA | + |
Preference number: 4 (lower is better) Translates to: LRVVEGREVPFSVSYHEFSIVGV*RVGWAI Trigger: TATAGCCCAGCCTACTCGCCAGACCCCTACTATGCT...GAATTCATGGTAGGAAACGGAAAAAGGCACTTCCCTTCCCTCTACCACCCGCAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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3UTR CAA 72 bp | CACACTTTCTCAGGCCTCCGTCCGTCACGTTCTGCCTaGCATCCGTTACGTTACGTTACGTTACGTTACGTT | + |
Preference number: 4 (lower is better) Translates to: HTFSGLRPSRSA*HPLRYVTLRYV Trigger: AACGTAACGTAACGTAACGTAACGTAACGGATGCAAGGCAGAACGTGACGGACGGAGGCCTGAGAAAGTGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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CDS-3UTR TCA 90 bp | TTGCGGGTGGTAGAGGGAAGGGAAGTGCCTTTTTCCGTTTCCTACCATGAATTCGTCCAGTGCCAGAAGTaGCTGGCCATGTTTAATCTC | + |
Preference number: 4 (lower is better) Translates to: LRVVEGREVPFSVSYHEFVQCQK*LAMFNL Trigger: GAGATTAAACATGGCCAGTCACTTCTGGCACTGGAC...GAATTCATGGTAGGAAACGGAAAAAGGCACTTCCCTTCCCTCTACCACCCGCAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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CDS-3UTR TCA 90 bp | CACCTTTTCAAAGGAGAGCCAGTTCTTGGGGACTCAAGGTGGGACAGATGTTTCACTTGGAGGCCTGGCTaGTGTCTTCACTTGTTTTGC | + |
Preference number: 4 (lower is better) Translates to: HLFKGEPVLGDSRWDRCFTWRPG*CLHLFC Trigger: GCAAAACAAGTGAAGACATCAGCCAGGCCTCCAAGT...GAAACATCTGTCCCACCTTGAGTCCCCAAGAACTGGCTCTCCTTTGAAAAGGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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CDS-3UTR TCA 90 bp | ACCGGGAAAGAACATGAGCAGTGTTGGTCAAGGCCTCATTCTGGAATCCTCTCACCAATACTCAGACTCTaGAGCATAGTAGGGGTCTGG | + |
Preference number: 4 (lower is better) Translates to: TGKEHEQCWSRPHSGILSPILRL*SIVGVW Trigger: CCAGACCCCTACTATGCTTCAGAGTCTGAGTATTGG...TGAGAGGATTCCAGAATGAGGCCTTGACCAACACTGCTCATGTTCTTTCCCGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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CDS-3UTR TCA 90 bp | CACATCACCTCATGGAGCGCTGAGCTCCTCCTATTTGGATGTGTGAAGAGAATTAACGAGGGGAGCCATTaGAGGACATCTCATAGCCAG | + |
Preference number: 4 (lower is better) Translates to: HITSWSAELLLFGCVKRINEGSH*RTSHSQ Trigger: CTGGCTATGAGATGTCCTTCAATGGCTCCCCTCGTT...AATTCTCTTCACACATCCAAATAGGAGGAGCTCAGCGCTCCATGAGGTGATGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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CDS-3UTR CCA 90 bp | TTGCGGGTGGTAGAGGGAAGGGAAGTGCCTTTTTCCGTTTCCTACCATGAATTCACATCTAATTGGCTATaGTATGGGGAGCTCCGGCCA | + |
Preference number: 4 (lower is better) Translates to: LRVVEGREVPFSVSYHEFTSNWL*YGELRP Trigger: TGGCCGGAGCTCCCCATACCATAGCCAATTAGATGT...GAATTCATGGTAGGAAACGGAAAAAGGCACTTCCCTTCCCTCTACCACCCGCAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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CDS-3UTR CCA 90 bp | ACCGGGAAAGAACATGAGCAGTGTTGGTCAAGGCCTCATTCTGGAATCCTCTCAGTTACTCTCTCCAGCTaGGATGTGAAAGTGCTTGGG | + |
Preference number: 4 (lower is better) Translates to: TGKEHEQCWSRPHSGILSVTLSS*DVKVLG Trigger: CCCAAGCACTTTCACATCCCAGCTGGAGAGAGTAAC...TGAGAGGATTCCAGAATGAGGCCTTGACCAACACTGCTCATGTTCTTTCCCGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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CDS-3UTR CCA 90 bp | GACTCAGAATTGAAGTGGGGGTGTGAGAAGGCTCTGTTCTCCCTTGTCCCAGAATGCTCTTGGTTGCTGTaGACAAATCACCATGCCGTT | + |
Preference number: 4 (lower is better) Translates to: DSELKWGCEKALFSLVPECSWLL*TNHHAV Trigger: AACGGCATGGTGATTTGTCCACAGCAACCAAGAGCA...TTCTGGGACAAGGGAGAACAGAGCCTTCTCACACCCCCACTTCAATTCTGAGTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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CDS-3UTR CCA 90 bp | ATTAAACGTCCCTTGCAGTCCCTCCGCCCCGTCACCCTTCCAATGTGCAGATTCCACTTGTTTTGCTCTTaGTTGCTGTGGACAAATCAC | + |
Preference number: 4 (lower is better) Translates to: IKRPLQSLRPVTLPMCRFHLFCS*LLWTNH Trigger: GTGATTTGTCCACAGCAACCAAGAGCAAAACAAGTG...GAATCTGCACATTGGAAGGGTGACGGGGCGGAGGGACTGCAAGGGACGTTTAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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CDS-3UTR TCA 90 bp | CTGGAGCTTATTGTGGGAACATTAGCCCTGTGGTGTGTAGATCATCAGGCACATGACTGGGAGCACGTCTaGCATACACATTCTTTCCCA | + |
Preference number: 4 (lower is better) Translates to: LELIVGTLALWCVDHQAHDWEHV*HTHSFP Trigger: TGGGAAAGAATGTGTATGTCAGACGTGCTCCCAGTC...ATGTGCCTGATGATCTACACACCACAGGGCTAATGTTCCCACAATAAGCTCCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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CDS-3UTR TCA 90 bp | CACCTTTTCAAAGGAGAGCCAGTTCTTGGGGACTCAAGGTGGGACAGATGTTTCCACAAGTCTCACATTTaGTGCCAAACTGGGAGTGGT | + |
Preference number: 4 (lower is better) Translates to: HLFKGEPVLGDSRWDRCFHKSHI*CQTGSG Trigger: ACCACTCCCAGTTTGGCATCAAATGTGAGACTTGTG...GAAACATCTGTCCCACCTTGAGTCCCCAAGAACTGGCTCTCCTTTGAAAAGGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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CDS-3UTR GCA 90 bp | AATGACTCAGAATTGAAGTGGGGGTGTGAGAAGGCTCTGTTCTCCCTTGTCCCAAGCTATCACAGCGGGTaGCATAAAGCTGTTGGTAGT | + |
Preference number: 4 (lower is better) Translates to: NDSELKWGCEKALFSLVPSYHSG*HKAVGS Trigger: ACTACCAACAGCTTTATGGCACCCGCTGTGATAGCT...TGGGACAAGGGAGAACAGAGCCTTCTCACACCCCCACTTCAATTCTGAGTCATT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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CDS-3UTR GCA 90 bp | CTGGAGCTTATTGTGGGAACATTAGCCCTGTGGTGTGTAGATCATCAGGCACATTGCTTGCAGATTGGGTaGCAAACCTCAGAACCTGTG | + |
Preference number: 4 (lower is better) Translates to: LELIVGTLALWCVDHQAHCLQIG*QTSEPV Trigger: CACAGGTTCTGAGGTTTGGCACCCAATCTGCAAGCA...ATGTGCCTGATGATCTACACACCACAGGGCTAATGTTCCCACAATAAGCTCCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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CDS-3UTR GCA 90 bp | CACATCACCTCATGGAGCGCTGAGCTCCTCCTATTTGGATGTGTGAAGAGAATTTGCTTGCAGATTGGGTaGCAAACCTCAGAACCTGTG | + |
Preference number: 4 (lower is better) Translates to: HITSWSAELLLFGCVKRICLQIG*QTSEPV Trigger: CACAGGTTCTGAGGTTTGGCACCCAATCTGCAAGCA...AATTCTCTTCACACATCCAAATAGGAGGAGCTCAGCGCTCCATGAGGTGATGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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CDS-3UTR GCA 90 bp | AGGAGAGCCAGTTCTTGGGGACTCAAGGTGGGACAGATGTTTCAGTATAAAAAGTCAGATGTCCGCCTGTaGTTGAGCTTCTTCTCTGCC | + |
Preference number: 4 (lower is better) Translates to: RRASSWGLKVGQMFQYKKSDVRL*LSFFSA Trigger: GGCAGAGAAGAAGCTCAAGCACAGGCGGACATCTGA...CTTTTTATACTGAAACATCTGTCCCACCTTGAGTCCCCAAGAACTGGCTCTCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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CDS-3UTR GCA 90 bp | AGGAGAGCCAGTTCTTGGGGACTCAAGGTGGGACAGATGTTTCAGTATAAAAAGCATGCCCCAGTTGACTaGGTTCATGCTGTCGTAGTG | + |
Preference number: 4 (lower is better) Translates to: RRASSWGLKVGQMFQYKKHAPVD*VHAVVV Trigger: CACTACGACAGCATGAACGCAGTCAACTGGGGCATG...CTTTTTATACTGAAACATCTGTCCCACCTTGAGTCCCCAAGAACTGGCTCTCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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CDS-3UTR CCA 90 bp | CACCTTTTCAAAGGAGAGCCAGTTCTTGGGGACTCAAGGTGGGACAGATGTTTCGTGAAGCATCGGATGTaGAAGTGGTTGTTGTGGACA | + |
Preference number: 4 (lower is better) Translates to: HLFKGEPVLGDSRWDRCFVKHRM*KWLLWT Trigger: TGTCCACAACAACCACTTCCACATCCGATGCTTCAC...GAAACATCTGTCCCACCTTGAGTCCCCAAGAACTGGCTCTCCTTTGAAAAGGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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CDS-3UTR CCA 90 bp | AGGAGAGCCAGTTCTTGGGGACTCAAGGTGGGACAGATGTTTCAGTATAAAAAGAACCAGGGGGTGAGATaGAAGTTTCAGATGTCCGCC | + |
Preference number: 4 (lower is better) Translates to: RRASSWGLKVGQMFQYKKNQGVR*KFQMSA Trigger: GGCGGACATCTGAAACTTCCATCTCACCCCCTGGTT...CTTTTTATACTGAAACATCTGTCCCACCTTGAGTCCCCAAGAACTGGCTCTCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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CDS-3UTR CCA 90 bp | CACATCACCTCATGGAGCGCTGAGCTCCTCCTATTTGGATGTGTGAAGAGAATTCGTCGGAGGTGTATCTaGAATGAGGCTCGTAGGAAA | + |
Preference number: 4 (lower is better) Translates to: HITSWSAELLLFGCVKRIRRRCI*NEARRK Trigger: TTTCCTACGAGCCTCATTCCAGATACACCTCCGACG...AATTCTCTTCACACATCCAAATAGGAGGAGCTCAGCGCTCCATGAGGTGATGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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CDS-3UTR CCA 90 bp | AATGACTCAGAATTGAAGTGGGGGTGTGAGAAGGCTCTGTTCTCCCTTGTCCCAGGTAAGAGGTTGGCGTaGAGGACCTCACATCTAATT | + |
Preference number: 4 (lower is better) Translates to: NDSELKWGCEKALFSLVPGKRLA*RTSHLI Trigger: AATTAGATGTGAGGTCCTCCACGCCAACCTCTTACC...TGGGACAAGGGAGAACAGAGCCTTCTCACACCCCCACTTCAATTCTGAGTCATT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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3UTR CAA 72 bp | AAGAGGGAACAGCTACCACTGATCAATGACTCAGAATaGAAGTGGGGGTGTGAGAAGGCTCTGTTCTCCCTT | + |
Preference number: 4 (lower is better) Translates to: KREQLPLINDSE*KWGCEKALFSL Trigger: AAGGGAGAACAGAGCCTTCTCACACCCCCACTTCAATTCTGAGTCATTGATCAGTGGTAGCTGTTCCCTCTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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CDS-3UTR TCA 90 bp | CCATTATACAAGAGGATTATACTGCGTGTCAGGATAGAGATTTACATACATCTTAGCGGTAGCACTGGATaGCATTGGAGCCGCCCCGGG | + |
Preference number: 4 (lower is better) Translates to: PLYKRIILRVRIEIYIHLSGSTG*HWSRPG Trigger: CCCGGGGCGGCTCCAATGTCATCCAGTGCTACCGCT...AAGATGTATGTAAATCTCTATCCTGACACGCAGTATAATCCTCTTGTATAATGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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CDS-3UTR TCA 90 bp | CACCTTTTCAAAGGAGAGCCAGTTCTTGGGGACTCAAGGTGGGACAGATGTTTCCACATACTTGACAAGTaGAGCATCGGATGTGGAAGT | + |
Preference number: 4 (lower is better) Translates to: HLFKGEPVLGDSRWDRCFHILDK*SIGCGS Trigger: ACTTCCACATCCGATGCTTCACTTGTCAAGTATGTG...GAAACATCTGTCCCACCTTGAGTCCCCAAGAACTGGCTCTCCTTTGAAAAGGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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CDS-3UTR CCA 90 bp | ATCAATGACTCAGAATTGAAGTGGGGGTGTGAGAAGGCTCTGTTCTCCCTTGTCGGTAAGAGGTTGGCGTaGAGGACCTCACATCTAATT | + |
Preference number: 4 (lower is better) Translates to: INDSELKWGCEKALFSLVGKRLA*RTSHLI Trigger: AATTAGATGTGAGGTCCTCCACGCCAACCTCTTACC...GACAAGGGAGAACAGAGCCTTCTCACACCCCCACTTCAATTCTGAGTCATTGAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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CDS-3UTR CCA 90 bp | ACCGGGAAAGAACATGAGCAGTGTTGGTCAAGGCCTCATTCTGGAATCCTCTCACTATACTTGGAGGCCTaGCTGATGTCTTCACTTGTT | + |
Preference number: 4 (lower is better) Translates to: TGKEHEQCWSRPHSGILSLYLEA*LMSSLV Trigger: AACAAGTGAAGACATCAGCCAGGCCTCCAAGTATAG...TGAGAGGATTCCAGAATGAGGCCTTGACCAACACTGCTCATGTTCTTTCCCGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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CDS-3UTR CCA 90 bp | AGGAGAGCCAGTTCTTGGGGACTCAAGGTGGGACAGATGTTTCAGTATAAAAAGGGTTCCTTCCTCTTGTaGTCACCAGTAGCAGCTCAT | + |
Preference number: 4 (lower is better) Translates to: RRASSWGLKVGQMFQYKKGSFLL*SPVAAH Trigger: ATGAGCTGCTACTGGTGACCACAAGAGGAAGGAACC...CTTTTTATACTGAAACATCTGTCCCACCTTGAGTCCCCAAGAACTGGCTCTCCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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CDS-3UTR GCA 90 bp | TTGCGGGTGGTAGAGGGAAGGGAAGTGCCTTTTTCCGTTTCCTACCATGAATTCTGTTTTGCTCTTGGTTaGTGTGGACAAATCACCATG | + |
Preference number: 4 (lower is better) Translates to: LRVVEGREVPFSVSYHEFCFALG*CGQITM Trigger: CATGGTGATTTGTCCACAGCAACCAAGAGCAAAACA...GAATTCATGGTAGGAAACGGAAAAAGGCACTTCCCTTCCCTCTACCACCCGCAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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3UTR CAA 72 bp | CAGTACAGAAAAGCAAGTCTCACGGCAGGCAGCATGTaGTGTCCCATTATACAAGAGGATTATACTGCGTGT | + |
Preference number: 4 (lower is better) Translates to: QYRKASLTAGSM*CPIIQEDYTAC Trigger: ACACGCAGTATAATCCTCTTGTATAATGGGACACAACATGCTGCCTGCCGTGAGACTTGCTTTTCTGTACTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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CDS-3UTR CCA 90 bp | AGGAGAGCCAGTTCTTGGGGACTCAAGGTGGGACAGATGTTTCAGTATAAAAAGCACTTGTTTTGCTCTTaGTTGCTGTGGACAAATCAC | + |
Preference number: 4 (lower is better) Translates to: RRASSWGLKVGQMFQYKKHLFCS*LLWTNH Trigger: GTGATTTGTCCACAGCAACCAAGAGCAAAACAAGTG...CTTTTTATACTGAAACATCTGTCCCACCTTGAGTCCCCAAGAACTGGCTCTCCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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CDS-3UTR CCA 90 bp | CCATTATACAAGAGGATTATACTGCGTGTCAGGATAGAGATTTACATACATCTTGCTTCTTCTCTGCCCTaGCTGCCTGCTTGCAGATTG | + |
Preference number: 4 (lower is better) Translates to: PLYKRIILRVRIEIYIHLASSLP*LPACRL Trigger: CAATCTGCAAGCAGGCAGCCAGGGCAGAGAAGAAGC...AAGATGTATGTAAATCTCTATCCTGACACGCAGTATAATCCTCTTGTATAATGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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CDS-3UTR CCA 90 bp | CCATTATACAAGAGGATTATACTGCGTGTCAGGATAGAGATTTACATACATCTTAGCCTGGTAAGAGGTTaGCGTGGAGGACCTCACATC | + |
Preference number: 4 (lower is better) Translates to: PLYKRIILRVRIEIYIHLSLVRG*RGGPHI Trigger: GATGTGAGGTCCTCCACGCCAACCTCTTACCAGGCT...AAGATGTATGTAAATCTCTATCCTGACACGCAGTATAATCCTCTTGTATAATGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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CDS-3UTR TCA 90 bp | CCATTATACAAGAGGATTATACTGCGTGTCAGGATAGAGATTTACATACATCTTAGGCAGATTTGGAGATaGGGGGATCACTGTCAGCCA | + |
Preference number: 4 (lower is better) Translates to: PLYKRIILRVRIEIYIHLRQIWR*GDHCQP Trigger: TGGCTGACAGTGATCCCCTCATCTCCAAATCTGCCT...AAGATGTATGTAAATCTCTATCCTGACACGCAGTATAATCCTCTTGTATAATGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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CDS-3UTR CAA 90 bp | GGCCGGCGTCAGCCCTGGAGACTGGGGGAAGGTCCTGAAGCAGGGAGTAGAGGCGCCCTGGCTGCCTGCTaGCAGATTGGGTGCCAAACC | + |
Preference number: 5 (lower is better) Translates to: GRRQPWRLGEGPEAGSRGALAAC*QIGCQT Trigger: GGTTTGGCACCCAATCTGCAAGCAGGCAGCCAGGGC...GCCTCTACTCCCTGCTTCAGGACCTTCCCCCAGTCTCCAGGGCTGACGCCGGCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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CDS TCA 90 bp | GCTGGTGGAGCTCCGTGGAGGGGTCCAAGGATCCGCATAGGAGCTTaGCCGCGCCTTCATCTCTTCCTTCAGGATCAGCCGGCCAATCCC | + |
Preference number: 5 (lower is better) Translates to: AGGAPWRGPRIRIGA*PRLHLFLQDQPANP Trigger: GGGATTGGCCGGCTGATCCTGAAGGAAGAGATGAAGGCGCGGTCAAGCTCCTATGCGGATCCTTGGACCCCTCCACGGAGCTCCACCAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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CDS CCA 90 bp | AGGACATCTCATAGCCAGTGGTGTGCAGGGCCTCCCGACTGCTGGTaGAGCTCCGTGGAGGGGTCCAAGGATCCGCATAGGAGCTTGACC | + |
Preference number: 5 (lower is better) Translates to: RTSHSQWCAGPPDCW*SSVEGSKDPHRSLT Trigger: GGTCAAGCTCCTATGCGGATCCTTGGACCCCTCCACGGAGCTCCACCAGCAGTCGGGAGGCCCTGCACACCACTGGCTATGAGATGTCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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CDS-3UTR CAA 90 bp | GCAGGGAGTAGAGGCTCCTCCAGGCACCTTTTCAAAGGAGAGCCAGTTCTTGGGCGGACCACCTCCCCTTaGCAGGTGTCTCCGCAGCGG | + |
Preference number: 5 (lower is better) Translates to: AGSRGSSRHLFKGEPVLGRTTSP*QVSPQR Trigger: CCGCTGCGGAGACACCTGCAAAGGGGAGGTGGTCCG...CCCAAGAACTGGCTCTCCTTTGAAAAGGTGCCTGGAGGAGCCTCTACTCCCTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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CDS-3UTR CAA 90 bp | CGTCACACACACTTTCTCAGGCCTCCGTCCGTCACGTTCTGCCTTGCATCCGTTCGGACCACCTCCCCTTaGCAGGTGTCTCCGCAGCGG | + |
Preference number: 5 (lower is better) Translates to: RHTHFLRPPSVTFCLASVRTTSP*QVSPQR Trigger: CCGCTGCGGAGACACCTGCAAAGGGGAGGTGGTCCG...AACGGATGCAAGGCAGAACGTGACGGACGGAGGCCTGAGAAAGTGTGTGTGACG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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CDS GCA 90 bp | GCCCTGAGCGGTAGTAATGAGGCGAGCGGGAGAAGGTGGGAGACATaGCTTGCCGACTGTAGGTGGGGGAATCAATGTAGCCAGGGCTGG | + |
Preference number: 5 (lower is better) Translates to: ALSGSNEASGRRWET*LADCRWGNQCSQGW Trigger: CCAGCCCTGGCTACATTGATTCCCCCACCTACAGTCGGCAAGGCATGTCTCCCACCTTCTCCCGCTCGCCTCATTACTACCGCTCAGGGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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CDS-3UTR CAA 90 bp | GGCCGGCGTCAGCCCTGGAGACTGGGGGAAGGTCCTGAAGCAGGGAGTAGAGGCCTAGAAAAGCCGGGCTaGCTTCTTCAGTTCGTTCCT | + |
Preference number: 5 (lower is better) Translates to: GRRQPWRLGEGPEAGSRGLEKPG*LLQFVP Trigger: AGGAACGAACTGAAGAAGCAAGCCCGGCTTTTCTAG...GCCTCTACTCCCTGCTTCAGGACCTTCCCCCAGTCTCCAGGGCTGACGCCGGCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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CDS CCA 90 bp | ACATGCCTTGCCGACTGTAGGTGGGGGAATCAATGTAGCCAGGGCTaGAGGCCCGCCTCTGCCGGAGGTCCAGGTTCTCATAGATGTCCT | + |
Preference number: 5 (lower is better) Translates to: TCLADCRWGNQCSQG*RPASAGGPGSHRCP Trigger: AGGACATCTATGAGAACCTGGACCTCCGGCAGAGGCGGGCCTCCAGCCCTGGCTACATTGATTCCCCCACCTACAGTCGGCAAGGCATGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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CDS-3UTR CAA 90 bp | GCAGGGAGTAGAGGCTCCTCCAGGCACCTTTTCAAAGGAGAGCCAGTTCTTGGGGGTGGGAGACATGCCTaGCCGACTGTAGGTGGGGGA | + |
Preference number: 5 (lower is better) Translates to: AGSRGSSRHLFKGEPVLGGGRHA*PTVGGG Trigger: TCCCCCACCTACAGTCGGCAAGGCATGTCTCCCACC...CCCAAGAACTGGCTCTCCTTTGAAAAGGTGCCTGGAGGAGCCTCTACTCCCTGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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CDS CCA 90 bp | CACTCTCAGGCCCTGAGCGGTAGTAATGAGGCGAGCGGGAGAAGGTaGGAGACATGCCTTGCCGACTGTAGGTGGGGGAATCAATGTAGC | + |
Preference number: 5 (lower is better) Translates to: HSQALSGSNEASGRR*ETCLADCRWGNQCS Trigger: GCTACATTGATTCCCCCACCTACAGTCGGCAAGGCATGTCTCCCACCTTCTCCCGCTCGCCTCATTACTACCGCTCAGGGCCTGAGAGTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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CDS-3UTR CAA 90 bp | GGCCGGCGTCAGCCCTGGAGACTGGGGGAAGGTCCTGAAGCAGGGAGTAGAGGCTATGGAACACCGTCTTaGCTAATGTATTCCCCAGTG | + |
Preference number: 5 (lower is better) Translates to: GRRQPWRLGEGPEAGSRGYGTPS*LMYSPV Trigger: CACTGGGGAATACATTAGCAAAGACGGTGTTCCATA...GCCTCTACTCCCTGCTTCAGGACCTTCCCCCAGTCTCCAGGGCTGACGCCGGCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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CDS-3UTR CAA 90 bp | TCTGCACCAGCTGCACACGCCTTCAGCAACGTCACACACACTTTCTCAGGCCTCGATGTCCGCCTGTGCTaGAGCTTCTTCTCTGCCCTG | + |
Preference number: 5 (lower is better) Translates to: SAPAAHAFSNVTHTFSGLDVRLC*SFFSAL Trigger: CAGGGCAGAGAAGAAGCTCAAGCACAGGCGGACATC...GAGGCCTGAGAAAGTGTGTGTGACGTTGCTGAAGGCGTGTGCAGCTGGTGCAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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CDS-3UTR CAA 90 bp | CCTTGTCCCAGAAAGCACGAGAGTCAGTCCCTGAGGCCACCGGGAAAGAACATGGATGTCCGCCTGTGCTaGAGCTTCTTCTCTGCCCTG | + |
Preference number: 5 (lower is better) Translates to: PCPRKHESQSLRPPGKNMDVRLC*SFFSAL Trigger: CAGGGCAGAGAAGAAGCTCAAGCACAGGCGGACATC...CATGTTCTTTCCCGGTGGCCTCAGGGACTGACTCTCGTGCTTTCTGGGACAAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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CDS CCA 90 bp | CAGCTGGGATGTGAAAGTGCTTGGGAGCCTGGTAAGAGGTTGGCGTaGAGGACCTCACATCTAATTGGCTATGGTATGGGGAGCTCCGGC | + |
Preference number: 5 (lower is better) Translates to: QLGCESAWEPGKRLA*RTSHLIGYGMGSSG Trigger: GCCGGAGCTCCCCATACCATAGCCAATTAGATGTGAGGTCCTCCACGCCAACCTCTTACCAGGCTCCCAAGCACTTTCACATCCCAGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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CDS-3UTR CAA 90 bp | GTGGGCTCGCCTGACAGTACAGAAAAGCAAGTCTCACGGCAGGCAGCATGTTGTCTGACGTGCCACTGCTaGTCCAGTGCCAGAAGTGAC | + |
Preference number: 5 (lower is better) Translates to: VGSPDSTEKQVSRQAACCLTCHC*SSARSD Trigger: GTCACTTCTGGCACTGGACAAGCAGTGGCACGTCAG...ACAACATGCTGCCTGCCGTGAGACTTGCTTTTCTGTACTGTCAGGCGAGCCCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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CDS-3UTR CAA 90 bp | GACTCAGAATTGAAGTGGGGGTGTGAGAAGGCTCTGTTCTCCCTTGTCCCAGAAGCCCTGGCTGCCTGCTaGCAGATTGGGTGCCAAACC | + |
Preference number: 5 (lower is better) Translates to: DSELKWGCEKALFSLVPEALAAC*QIGCQT Trigger: GGTTTGGCACCCAATCTGCAAGCAGGCAGCCAGGGC...TTCTGGGACAAGGGAGAACAGAGCCTTCTCACACCCCCACTTCAATTCTGAGTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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CDS-3UTR CAA 90 bp | CTTCAGCAACGTCACACACACTTTCTCAGGCCTCCGTCCGTCACGTTCTGCCTTGAGCCTGGTAAGAGGTaGGCGTGGAGGACCTCACAT | + |
Preference number: 5 (lower is better) Translates to: LQQRHTHFLRPPSVTFCLEPGKR*AWRTSH Trigger: ATGTGAGGTCCTCCACGCCAACCTCTTACCAGGCTC...AAGGCAGAACGTGACGGACGGAGGCCTGAGAAAGTGTGTGTGACGTTGCTGAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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CDS-3UTR CAA 90 bp | GCTCGCCTGACAGTACAGAAAAGCAAGTCTCACGGCAGGCAGCATGTTGTGTCCTCTCGCATGCCCCAGTaGACTGCGTTCATGCTGTCG | + |
Preference number: 5 (lower is better) Translates to: ARLTVQKSKSHGRQHVVSSRMPQ*TAFMLS Trigger: CGACAGCATGAACGCAGTCAACTGGGGCATGCGAGA...GGACACAACATGCTGCCTGCCGTGAGACTTGCTTTTCTGTACTGTCAGGCGAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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CDS-3UTR CAA 90 bp | ATTAAACGTCCCTTGCAGTCCCTCCGCCCCGTCACCCTTCCAATGTGCAGATTCTCCGGTCCACATCCTTaGGCAGTCGGTTCCTTCCTC | + |
Preference number: 5 (lower is better) Translates to: IKRPLQSLRPVTLPMCRFSGPHP*AVGSFL Trigger: GAGGAAGGAACCGACTGCCAAAGGATGTGGACCGGA...GAATCTGCACATTGGAAGGGTGACGGGGCGGAGGGACTGCAAGGGACGTTTAAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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CDS-3UTR CAA 90 bp | GCTCGCCTGACAGTACAGAAAAGCAAGTCTCACGGCAGGCAGCATGTTGTGTCCTCCGGTCCACATCCTTaGGCAGTCGGTTCCTTCCTC | + |
Preference number: 5 (lower is better) Translates to: ARLTVQKSKSHGRQHVVSSGPHP*AVGSFL Trigger: GAGGAAGGAACCGACTGCCAAAGGATGTGGACCGGA...GGACACAACATGCTGCCTGCCGTGAGACTTGCTTTTCTGTACTGTCAGGCGAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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CDS TCA 90 bp | AGCACAGATGACTCGGTTAGGCGACCCGATGCTGGAACCAGGGGGTaGGATGGAAGTTTCAGATGTCCGCCTGTGCTTGAGCTTCTTCTC | + |
Preference number: 5 (lower is better) Translates to: STDDSVRRPDAGTRG*DGSFRCPPVLELLL Trigger: GAGAAGAAGCTCAAGCACAGGCGGACATCTGAAACTTCCATCTCACCCCCTGGTTCCAGCATCGGGTCGCCTAACCGAGTCATCTGTGCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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CDS-3UTR CAA 90 bp | CCTTGTCCCAGAAAGCACGAGAGTCAGTCCCTGAGGCCACCGGGAAAGAACATGGGTGCCATAAAGCTGTaGGTAGTCCTGGGTGCAGAT | + |
Preference number: 5 (lower is better) Translates to: PCPRKHESQSLRPPGKNMGAIKL*VVLGAD Trigger: ATCTGCACCCAGGACTACCAACAGCTTTATGGCACC...CATGTTCTTTCCCGGTGGCCTCAGGGACTGACTCTCGTGCTTTCTGGGACAAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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CDS-3UTR CAA 90 bp | CTTCAGCAACGTCACACACACTTTCTCAGGCCTCCGTCCGTCACGTTCTGCCTTCTGCCTGCTTGCAGATaGGGTGCCAAACCTCAGAAC | + |
Preference number: 5 (lower is better) Translates to: LQQRHTHFLRPPSVTFCLLPACR*GAKPQN Trigger: GTTCTGAGGTTTGGCACCCAATCTGCAAGCAGGCAG...AAGGCAGAACGTGACGGACGGAGGCCTGAGAAAGTGTGTGTGACGTTGCTGAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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CDS-3UTR CAA 90 bp | ATTAAACGTCCCTTGCAGTCCCTCCGCCCCGTCACCCTTCCAATGTGCAGATTCAATGAGGTCGGGGCGTaGCACCTCGTAGATGGACTT | + |
Preference number: 5 (lower is better) Translates to: IKRPLQSLRPVTLPMCRFNEVGA*HLVDGL Trigger: AAGTCCATCTACGAGGTGCAACGCCCCGACCTCATT...GAATCTGCACATTGGAAGGGTGACGGGGCGGAGGGACTGCAAGGGACGTTTAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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CDS-3UTR CAA 90 bp | CTTCAGCAACGTCACACACACTTTCTCAGGCCTCCGTCCGTCACGTTCTGCCTTAATGAGGTCGGGGCGTaGCACCTCGTAGATGGACTT | + |
Preference number: 5 (lower is better) Translates to: LQQRHTHFLRPPSVTFCLNEVGA*HLVDGL Trigger: AAGTCCATCTACGAGGTGCAACGCCCCGACCTCATT...AAGGCAGAACGTGACGGACGGAGGCCTGAGAAAGTGTGTGTGACGTTGCTGAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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CDS-3UTR CAA 90 bp | GCTCGCCTGACAGTACAGAAAAGCAAGTCTCACGGCAGGCAGCATGTTGTGTCCGATCCGCATAGGAGCTaGACCGCGCCTTCATCTCTT | + |
Preference number: 5 (lower is better) Translates to: ARLTVQKSKSHGRQHVVSDPHRS*TAPSSL Trigger: AAGAGATGAAGGCGCGGTCAAGCTCCTATGCGGATC...GGACACAACATGCTGCCTGCCGTGAGACTTGCTTTTCTGTACTGTCAGGCGAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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CDS-3UTR CAA 90 bp | GTGGGCTCGCCTGACAGTACAGAAAAGCAAGTCTCACGGCAGGCAGCATGTTGTGGCAGTGAGGCAGATTaGGAGATGAGGGGATCACTG | + |
Preference number: 5 (lower is better) Translates to: VGSPDSTEKQVSRQAACCGSEAD*EMRGSL Trigger: CAGTGATCCCCTCATCTCCAAATCTGCCTCACTGCC...ACAACATGCTGCCTGCCGTGAGACTTGCTTTTCTGTACTGTCAGGCGAGCCCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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CDS-3UTR CAA 90 bp | CGTCACACACACTTTCTCAGGCCTCCGTCCGTCACGTTCTGCCTTGCATCCGTTATGTACTCCTGGTTCTaGAAGAAGAAGCCCGACTGG | + |
Preference number: 5 (lower is better) Translates to: RHTHFLRPPSVTFCLASVMYSWF*KKKPDW Trigger: CCAGTCGGGCTTCTTCTTCAAGAACCAGGAGTACAT...AACGGATGCAAGGCAGAACGTGACGGACGGAGGCCTGAGAAAGTGTGTGTGACG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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CDS TCA 90 bp | GTAGCAGCTCATAAGGATAGATCTTGTACTCTCGCATGCCCCAGTTaGCTGCGTTCATGCTGTCGTAGTGGAAGAGGTCCGCACTGGGTG | + |
Preference number: 5 (lower is better) Translates to: VAAHKDRSCTLACPS*LRSCCRSGRGPHWV Trigger: CACCCAGTGCGGACCTCTTCCACTACGACAGCATGAACGCAGTCAACTGGGGCATGCGAGAGTACAAGATCTATCCTTATGAGCTGCTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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CDS GCA 90 bp | AGTTTCAGATGTCCGCCTGTGCTTGAGCTTCTTCTCTGCCCTGGCTaGCTGCTTGCAGATTGGGTGCCAAACCTCAGAACCTGTGAGATA | + |
Preference number: 5 (lower is better) Translates to: SFRCPPVLELLLCPG*LLADWVPNLRTCEI Trigger: TATCTCACAGGTTCTGAGGTTTGGCACCCAATCTGCAAGCAGGCAGCCAGGGCAGAGAAGAAGCTCAAGCACAGGCGGACATCTGAAACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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CDS GCA 90 bp | CAGCTCATAAGGATAGATCTTGTACTCTCGCATGCCCCAGTTGACTaGGTTCATGCTGTCGTAGTGGAAGAGGTCCGCACTGGGTGTCCT | + |
Preference number: 5 (lower is better) Translates to: QLIRIDLVLSHAPVD*VHAVVVEEVRTGCP Trigger: AGGACACCCAGTGCGGACCTCTTCCACTACGACAGCATGAACGCAGTCAACTGGGGCATGCGAGAGTACAAGATCTATCCTTATGAGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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CDS-3UTR CAA 90 bp | ACCGGGAAAGAACATGAGCAGTGTTGGTCAAGGCCTCATTCTGGAATCCTCTCAGCTTGCTGCTGGTCATaGACTGGGAGCACGTCTGAC | + |
Preference number: 5 (lower is better) Translates to: TGKEHEQCWSRPHSGILSACCWS*TGSTSD Trigger: GTCAGACGTGCTCCCAGTCAATGACCAGCAGCAAGC...TGAGAGGATTCCAGAATGAGGCCTTGACCAACACTGCTCATGTTCTTTCCCGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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CDS-3UTR CAA 90 bp | ACCGGGAAAGAACATGAGCAGTGTTGGTCAAGGCCTCATTCTGGAATCCTCTCACTTGGTCCACGGATCTaGATCGGCTTGCTGCTGGTC | + |
Preference number: 5 (lower is better) Translates to: TGKEHEQCWSRPHSGILSLGPRI*IGLLLV Trigger: GACCAGCAGCAAGCCGATCAAGATCCGTGGACCAAG...TGAGAGGATTCCAGAATGAGGCCTTGACCAACACTGCTCATGTTCTTTCCCGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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CDS-3UTR CAA 90 bp | TTGCGGGTGGTAGAGGGAAGGGAAGTGCCTTTTTCCGTTTCCTACCATGAATTCCTGACGTGCCACTGCTaGTCCAGTGCCAGAAGTGAC | + |
Preference number: 5 (lower is better) Translates to: LRVVEGREVPFSVSYHEFLTCHC*SSARSD Trigger: GTCACTTCTGGCACTGGACAAGCAGTGGCACGTCAG...GAATTCATGGTAGGAAACGGAAAAAGGCACTTCCCTTCCCTCTACCACCCGCAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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CDS TCA 90 bp | ACAGTGGCTTGGTCCACGGATCTTGATCGGCTTGCTGCTGGTCATTaGCTGGGAGCACGTCTGACATACACATTCTTTCCCACTGAAGGT | + |
Preference number: 5 (lower is better) Translates to: TVAWSTDLDRLAAGH*LGARLTYTFFPTEG Trigger: ACCTTCAGTGGGAAAGAATGTGTATGTCAGACGTGCTCCCAGTCAATGACCAGCAGCAAGCCGATCAAGATCCGTGGACCAAGCCACTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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CDS GCA 90 bp | CCAGTGAGGATGACGCTACAGGTCTGGCATTTGAAACAGCTGACGTaGCACTGCTTGTCCAGTGCCAGAAGTGACTGGCCATGTTTAATC | + |
Preference number: 5 (lower is better) Translates to: PVRMTLQVWHLKQLT*HCLSSARSDWPCLI Trigger: GATTAAACATGGCCAGTCACTTCTGGCACTGGACAAGCAGTGGCACGTCAGCTGTTTCAAATGCCAGACCTGTAGCGTCATCCTCACTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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CDS CCA 90 bp | AGCGAGTCCGGTCCACATCCTTTGGCAGTCGGTTCCTTCCTCTTGTaGTCACCAGTAGCAGCTCATAAGGATAGATCTTGTACTCTCGCA | + |
Preference number: 5 (lower is better) Translates to: SESGPHPLAVGSFLL*SPVAAHKDRSCTLA Trigger: TGCGAGAGTACAAGATCTATCCTTATGAGCTGCTACTGGTGACCACAAGAGGAAGGAACCGACTGCCAAAGGATGTGGACCGGACTCGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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CDS-3UTR CAA 90 bp | AATGACTCAGAATTGAAGTGGGGGTGTGAGAAGGCTCTGTTCTCCCTTGTCCCAATGTGGAAGTGGTTGTaGTGGACACGGACCACCTCC | + |
Preference number: 5 (lower is better) Translates to: NDSELKWGCEKALFSLVPMWKWL*WTRTTS Trigger: GGAGGTGGTCCGTGTCCACAACAACCACTTCCACAT...TGGGACAAGGGAGAACAGAGCCTTCTCACACCCCCACTTCAATTCTGAGTCATT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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CDS-3UTR CAA 90 bp | ACCGGGAAAGAACATGAGCAGTGTTGGTCAAGGCCTCATTCTGGAATCCTCTCAATGTGGAAGTGGTTGTaGTGGACACGGACCACCTCC | + |
Preference number: 5 (lower is better) Translates to: TGKEHEQCWSRPHSGILSMWKWL*WTRTTS Trigger: GGAGGTGGTCCGTGTCCACAACAACCACTTCCACAT...TGAGAGGATTCCAGAATGAGGCCTTGACCAACACTGCTCATGTTCTTTCCCGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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CDS-3UTR CAA 90 bp | ATCAATGACTCAGAATTGAAGTGGGGGTGTGAGAAGGCTCTGTTCTCCCTTGTCCTTGGTCCACGGATCTaGATCGGCTTGCTGCTGGTC | + |
Preference number: 5 (lower is better) Translates to: INDSELKWGCEKALFSLVLGPRI*IGLLLV Trigger: GACCAGCAGCAAGCCGATCAAGATCCGTGGACCAAG...GACAAGGGAGAACAGAGCCTTCTCACACCCCCACTTCAATTCTGAGTCATTGAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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CDS-3UTR CAA 90 bp | CTTCAGCAACGTCACACACACTTTCTCAGGCCTCCGTCCGTCACGTTCTGCCTTTCACAAGTCTCACATTaGATGCCAAACTGGGAGTGG | + |
Preference number: 5 (lower is better) Translates to: LQQRHTHFLRPPSVTFCLSQVSH*MPNWEW Trigger: CCACTCCCAGTTTGGCATCAAATGTGAGACTTGTGA...AAGGCAGAACGTGACGGACGGAGGCCTGAGAAAGTGTGTGTGACGTTGCTGAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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CDS-3UTR CAA 90 bp | CACATCACCTCATGGAGCGCTGAGCTCCTCCTATTTGGATGTGTGAAGAGAATTGAGCCTGGTAAGAGGTaGGCGTGGAGGACCTCACAT | + |
Preference number: 5 (lower is better) Translates to: HITSWSAELLLFGCVKRIEPGKR*AWRTSH Trigger: ATGTGAGGTCCTCCACGCCAACCTCTTACCAGGCTC...AATTCTCTTCACACATCCAAATAGGAGGAGCTCAGCGCTCCATGAGGTGATGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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CDS-3UTR CAA 90 bp | CACATCACCTCATGGAGCGCTGAGCTCCTCCTATTTGGATGTGTGAAGAGAATTTCTCGCATGCCCCAGTaGACTGCGTTCATGCTGTCG | + |
Preference number: 5 (lower is better) Translates to: HITSWSAELLLFGCVKRISRMPQ*TAFMLS Trigger: CGACAGCATGAACGCAGTCAACTGGGGCATGCGAGA...AATTCTCTTCACACATCCAAATAGGAGGAGCTCAGCGCTCCATGAGGTGATGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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CDS GCA 90 bp | AGGATGACGCTACAGGTCTGGCATTTGAAACAGCTGACGTGCCACTaGTTGTCCAGTGCCAGAAGTGACTGGCCATGTTTAATCTCCTCT | + |
Preference number: 5 (lower is better) Translates to: RMTLQVWHLKQLTCH*LSSARSDWPCLISS Trigger: AGAGGAGATTAAACATGGCCAGTCACTTCTGGCACTGGACAAGCAGTGGCACGTCAGCTGTTTCAAATGCCAGACCTGTAGCGTCATCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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CDS-3UTR CAA 90 bp | AGGAGAGCCAGTTCTTGGGGACTCAAGGTGGGACAGATGTTTCAGTATAAAAAGCGGATGTGGAAGTGGTaGTTGTGGACACGGACCACC | + |
Preference number: 5 (lower is better) Translates to: RRASSWGLKVGQMFQYKKRMWKW*LWTRTT Trigger: GGTGGTCCGTGTCCACAACAACCACTTCCACATCCG...CTTTTTATACTGAAACATCTGTCCCACCTTGAGTCCCCAAGAACTGGCTCTCCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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CDS-3UTR CAA 90 bp | GACTCAGAATTGAAGTGGGGGTGTGAGAAGGCTCTGTTCTCCCTTGTCCCAGAAATGTACTCCTGGTTCTaGAAGAAGAAGCCCGACTGG | + |
Preference number: 5 (lower is better) Translates to: DSELKWGCEKALFSLVPEMYSWF*KKKPDW Trigger: CCAGTCGGGCTTCTTCTTCAAGAACCAGGAGTACAT...TTCTGGGACAAGGGAGAACAGAGCCTTCTCACACCCCCACTTCAATTCTGAGTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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CDS-3UTR CAA 90 bp | AATGACTCAGAATTGAAGTGGGGGTGTGAGAAGGCTCTGTTCTCCCTTGTCCCACTACAGGTCTGGCATTaGAAACAGCTGACGTGCCAC | + |
Preference number: 5 (lower is better) Translates to: NDSELKWGCEKALFSLVPLQVWH*KQLTCH Trigger: GTGGCACGTCAGCTGTTTCAAATGCCAGACCTGTAG...TGGGACAAGGGAGAACAGAGCCTTCTCACACCCCCACTTCAATTCTGAGTCATT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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CDS-3UTR CAA 90 bp | ATTAAACGTCCCTTGCAGTCCCTCCGCCCCGTCACCCTTCCAATGTGCAGATTCTATGGAACACCGTCTTaGCTAATGTATTCCCCAGTG | + |
Preference number: 5 (lower is better) Translates to: IKRPLQSLRPVTLPMCRFYGTPS*LMYSPV Trigger: CACTGGGGAATACATTAGCAAAGACGGTGTTCCATA...GAATCTGCACATTGGAAGGGTGACGGGGCGGAGGGACTGCAAGGGACGTTTAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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CDS-3UTR CAA 90 bp | CACATCACCTCATGGAGCGCTGAGCTCCTCCTATTTGGATGTGTGAAGAGAATTCTGCCTGCTTGCAGATaGGGTGCCAAACCTCAGAAC | + |
Preference number: 5 (lower is better) Translates to: HITSWSAELLLFGCVKRILPACR*GAKPQN Trigger: GTTCTGAGGTTTGGCACCCAATCTGCAAGCAGGCAG...AATTCTCTTCACACATCCAAATAGGAGGAGCTCAGCGCTCCATGAGGTGATGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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CDS-3UTR CAA 90 bp | TCTGCACCAGCTGCACACGCCTTCAGCAACGTCACACACACTTTCTCAGGCCTCTTGTTTTGCTCTTGGTaGCTGTGGACAAATCACCAT | + |
Preference number: 5 (lower is better) Translates to: SAPAAHAFSNVTHTFSGLLFCSW*LWTNHH Trigger: ATGGTGATTTGTCCACAGCAACCAAGAGCAAAACAA...GAGGCCTGAGAAAGTGTGTGTGACGTTGCTGAAGGCGTGTGCAGCTGGTGCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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CDS-3UTR CAA 90 bp | CGTCACACACACTTTCTCAGGCCTCCGTCCGTCACGTTCTGCCTTGCATCCGTTTCACTTGTTTTGCTCTaGGTTGCTGTGGACAAATCA | + |
Preference number: 5 (lower is better) Translates to: RHTHFLRPPSVTFCLASVSLVLL*VAVDKS Trigger: TGATTTGTCCACAGCAACCAAGAGCAAAACAAGTGA...AACGGATGCAAGGCAGAACGTGACGGACGGAGGCCTGAGAAAGTGTGTGTGACG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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CDS-3UTR CAA 90 bp | ATCAATGACTCAGAATTGAAGTGGGGGTGTGAGAAGGCTCTGTTCTCCCTTGTCGATCCGCATAGGAGCTaGACCGCGCCTTCATCTCTT | + |
Preference number: 5 (lower is better) Translates to: INDSELKWGCEKALFSLVDPHRS*TAPSSL Trigger: AAGAGATGAAGGCGCGGTCAAGCTCCTATGCGGATC...GACAAGGGAGAACAGAGCCTTCTCACACCCCCACTTCAATTCTGAGTCATTGAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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CDS-3UTR CAA 90 bp | ATCAATGACTCAGAATTGAAGTGGGGGTGTGAGAAGGCTCTGTTCTCCCTTGTCGGCAGTGAGGCAGATTaGGAGATGAGGGGATCACTG | + |
Preference number: 5 (lower is better) Translates to: INDSELKWGCEKALFSLVGSEAD*EMRGSL Trigger: CAGTGATCCCCTCATCTCCAAATCTGCCTCACTGCC...GACAAGGGAGAACAGAGCCTTCTCACACCCCCACTTCAATTCTGAGTCATTGAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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CDS-3UTR CAA 90 bp | ATCAATGACTCAGAATTGAAGTGGGGGTGTGAGAAGGCTCTGTTCTCCCTTGTCGTCGGTTCCTTCCTCTaGTGGTCACCAGTAGCAGCT | + |
Preference number: 5 (lower is better) Translates to: INDSELKWGCEKALFSLVVGSFL*WSPVAA Trigger: AGCTGCTACTGGTGACCACAAGAGGAAGGAACCGAC...GACAAGGGAGAACAGAGCCTTCTCACACCCCCACTTCAATTCTGAGTCATTGAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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CDS-3UTR CAA 90 bp | ATCAATGACTCAGAATTGAAGTGGGGGTGTGAGAAGGCTCTGTTCTCCCTTGTCGGTGCCATAAAGCTGTaGGTAGTCCTGGGTGCAGAT | + |
Preference number: 5 (lower is better) Translates to: INDSELKWGCEKALFSLVGAIKL*VVLGAD Trigger: ATCTGCACCCAGGACTACCAACAGCTTTATGGCACC...GACAAGGGAGAACAGAGCCTTCTCACACCCCCACTTCAATTCTGAGTCATTGAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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CDS-3UTR CAA 90 bp | CACATCACCTCATGGAGCGCTGAGCTCCTCCTATTTGGATGTGTGAAGAGAATTCTACAGGTCTGGCATTaGAAACAGCTGACGTGCCAC | + |
Preference number: 5 (lower is better) Translates to: HITSWSAELLLFGCVKRILQVWH*KQLTCH Trigger: GTGGCACGTCAGCTGTTTCAAATGCCAGACCTGTAG...AATTCTCTTCACACATCCAAATAGGAGGAGCTCAGCGCTCCATGAGGTGATGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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CDS-3UTR CAA 90 bp | ATTAAACGTCCCTTGCAGTCCCTCCGCCCCGTCACCCTTCCAATGTGCAGATTCTCACTTGTTTTGCTCTaGGTTGCTGTGGACAAATCA | + |
Preference number: 5 (lower is better) Translates to: IKRPLQSLRPVTLPMCRFSLVLL*VAVDKS Trigger: TGATTTGTCCACAGCAACCAAGAGCAAAACAAGTGA...GAATCTGCACATTGGAAGGGTGACGGGGCGGAGGGACTGCAAGGGACGTTTAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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CDS-3UTR CAA 90 bp | AGGAGAGCCAGTTCTTGGGGACTCAAGGTGGGACAGATGTTTCAGTATAAAAAGGTCGGTTCCTTCCTCTaGTGGTCACCAGTAGCAGCT | + |
Preference number: 5 (lower is better) Translates to: RRASSWGLKVGQMFQYKKVGSFL*WSPVAA Trigger: AGCTGCTACTGGTGACCACAAGAGGAAGGAACCGAC...CTTTTTATACTGAAACATCTGTCCCACCTTGAGTCCCCAAGAACTGGCTCTCCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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CDS TCA 90 bp | CGGATCTTGATCGGCTTGCTGCTGGTCATTGACTGGGAGCACGTCTaGCATACACATTCTTTCCCACTGAAGGTCACCTTATCTCCAATA | + |
Preference number: 5 (lower is better) Translates to: RILIGLLLVIDWEHV*HTHSFPLKVTLSPI Trigger: TATTGGAGATAAGGTGACCTTCAGTGGGAAAGAATGTGTATGTCAGACGTGCTCCCAGTCAATGACCAGCAGCAAGCCGATCAAGATCCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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CDS-3UTR CAA 90 bp | TTGCGGGTGGTAGAGGGAAGGGAAGTGCCTTTTTCCGTTTCCTACCATGAATTCTCACAAGTCTCACATTaGATGCCAAACTGGGAGTGG | + |
Preference number: 5 (lower is better) Translates to: LRVVEGREVPFSVSYHEFSQVSH*MPNWEW Trigger: CCACTCCCAGTTTGGCATCAAATGTGAGACTTGTGA...GAATTCATGGTAGGAAACGGAAAAAGGCACTTCCCTTCCCTCTACCACCCGCAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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CDS-3UTR CAA 90 bp | CACATCACCTCATGGAGCGCTGAGCTCCTCCTATTTGGATGTGTGAAGAGAATTCTAGAAAAGCCGGGCTaGCTTCTTCAGTTCGTTCCT | + |
Preference number: 5 (lower is better) Translates to: HITSWSAELLLFGCVKRILEKPG*LLQFVP Trigger: AGGAACGAACTGAAGAAGCAAGCCCGGCTTTTCTAG...AATTCTCTTCACACATCCAAATAGGAGGAGCTCAGCGCTCCATGAGGTGATGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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CDS-3UTR CAA 90 bp | CACCTTTTCAAAGGAGAGCCAGTTCTTGGGGACTCAAGGTGGGACAGATGTTTCTTGTTTTGCTCTTGGTaGCTGTGGACAAATCACCAT | + |
Preference number: 5 (lower is better) Translates to: HLFKGEPVLGDSRWDRCFLFCSW*LWTNHH Trigger: ATGGTGATTTGTCCACAGCAACCAAGAGCAAAACAA...GAAACATCTGTCCCACCTTGAGTCCCCAAGAACTGGCTCTCCTTTGAAAAGGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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CDS CCA 72 bp | GCCGACTGTAGGTGGGGGAATCAATGTAGCCAGGGCTaGAGGCCCGCCTCTGCCGGAGGTCCAGGTTCTCAT | + |
Preference number: 6 (lower is better) Translates to: ADCRWGNQCSQG*RPASAGGPGSH Trigger: ATGAGAACCTGGACCTCCGGCAGAGGCGGGCCTCCAGCCCTGGCTACATTGATTCCCCCACCTACAGTCGGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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CDS CAA 90 bp | TGCTGGTGGAGCTCCGTGGAGGGGTCCAAGGATCCGCATAGGAGCTaGACCGCGCCTTCATCTCTTCCTTCAGGATCAGCCGGCCAATCC | + |
Preference number: 6 (lower is better) Translates to: CWWSSVEGSKDPHRS*TAPSSLPSGSAGQS Trigger: GGATTGGCCGGCTGATCCTGAAGGAAGAGATGAAGGCGCGGTCAAGCTCCTATGCGGATCCTTGGACCCCTCCACGGAGCTCCACCAGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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CDS TCA 72 bp | GCTCCGTGGAGGGGTCCAAGGATCCGCATAGGAGCTTaGCCGCGCCTTCATCTCTTCCTTCAGGATCAGCCG | + |
Preference number: 6 (lower is better) Translates to: APWRGPRIRIGA*PRLHLFLQDQP Trigger: CGGCTGATCCTGAAGGAAGAGATGAAGGCGCGGTCAAGCTCCTATGCGGATCCTTGGACCCCTCCACGGAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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CDS CCA 72 bp | GCCCTGAGCGGTAGTAATGAGGCGAGCGGGAGAAGGTaGGAGACATGCCTTGCCGACTGTAGGTGGGGGAAT | + |
Preference number: 6 (lower is better) Translates to: ALSGSNEASGRR*ETCLADCRWGN Trigger: ATTCCCCCACCTACAGTCGGCAAGGCATGTCTCCCACCTTCTCCCGCTCGCCTCATTACTACCGCTCAGGGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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CDS CCA 72 bp | GAGGTTGGCGTGGAGGACCTCACATCTAATTGGCTATaGTATGGGGAGCTCCGGCCACTCTCAGGCCCTGAG | + |
Preference number: 6 (lower is better) Translates to: EVGVEDLTSNWL*YGELRPLSGPE Trigger: CTCAGGGCCTGAGAGTGGCCGGAGCTCCCCATACCATAGCCAATTAGATGTGAGGTCCTCCACGCCAACCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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CDS CAA 72 bp | AGCTCCGTGGAGGGGTCCAAGGATCCGCATAGGAGCTaGACCGCGCCTTCATCTCTTCCTTCAGGATCAGCC | + |
Preference number: 6 (lower is better) Translates to: SSVEGSKDPHRS*TAPSSLPSGSA Trigger: GGCTGATCCTGAAGGAAGAGATGAAGGCGCGGTCAAGCTCCTATGCGGATCCTTGGACCCCTCCACGGAGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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CDS CAA 90 bp | CCTCCTGGGACAGGTGGCGCTCTAAGCGAGTCCGGTCCACATCCTTaGGCAGTCGGTTCCTTCCTCTTGTGGTCACCAGTAGCAGCTCAT | + |
Preference number: 6 (lower is better) Translates to: PPGTGGALSESGPHP*AVGSFLLWSPVAAH Trigger: ATGAGCTGCTACTGGTGACCACAAGAGGAAGGAACCGACTGCCAAAGGATGTGGACCGGACTCGCTTAGAGCGCCACCTGTCCCAGGAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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CDS TCA 72 bp | CTTTGCACCCAGCACAGTGGCTTGGTCCACGGATCTTaGTCGGCTTGCTGCTGGTCATTGACTGGGAGCACG | + |
Preference number: 6 (lower is better) Translates to: LCTQHSGLVHGS*SACCWSLTGST Trigger: CGTGCTCCCAGTCAATGACCAGCAGCAAGCCGATCAAGATCCGTGGACCAAGCCACTGTGCTGGGTGCAAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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CDS TCA 72 bp | GACTCGGTTAGGCGACCCGATGCTGGAACCAGGGGGTaGGATGGAAGTTTCAGATGTCCGCCTGTGCTTGAG | + |
Preference number: 6 (lower is better) Translates to: DSVRRPDAGTRG*DGSFRCPPVLE Trigger: CTCAAGCACAGGCGGACATCTGAAACTTCCATCTCACCCCCTGGTTCCAGCATCGGGTCGCCTAACCGAGTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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CDS CAA 72 bp | GTAATGAGGCGAGCGGGAGAAGGTGGGAGACATGCCTaGCCGACTGTAGGTGGGGGAATCAATGTAGCCAGG | + |
Preference number: 6 (lower is better) Translates to: VMRRAGEGGRHA*PTVGGGINVAR Trigger: CCTGGCTACATTGATTCCCCCACCTACAGTCGGCAAGGCATGTCTCCCACCTTCTCCCGCTCGCCTCATTAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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CDS GCA 72 bp | GGTAGTAATGAGGCGAGCGGGAGAAGGTGGGAGACATaGCTTGCCGACTGTAGGTGGGGGAATCAATGTAGC | + |
Preference number: 6 (lower is better) Translates to: GSNEASGRRWET*LADCRWGNQCS Trigger: GCTACATTGATTCCCCCACCTACAGTCGGCAAGGCATGTCTCCCACCTTCTCCCGCTCGCCTCATTACTACC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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CDS GCA 72 bp | TCCAGAGGGCTAGCCTCTCGAACTCGGAGATGGTCATaGCGAAGACTTGGTAGAACTCCTCCTGGGACAGGT | + |
Preference number: 6 (lower is better) Translates to: SRGLASRTRRWS*RRLGRTPPGTG Trigger: ACCTGTCCCAGGAGGAGTTCTACCAAGTCTTCGGCATGACCATCTCCGAGTTCGAGAGGCTAGCCCTCTGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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CDS CAA 72 bp | TCTTTGCACCCAGCACAGTGGCTTGGTCCACGGATCTaGATCGGCTTGCTGCTGGTCATTGACTGGGAGCAC | + |
Preference number: 6 (lower is better) Translates to: SLHPAQWLGPRI*IGLLLVIDWEH Trigger: GTGCTCCCAGTCAATGACCAGCAGCAAGCCGATCAAGATCCGTGGACCAAGCCACTGTGCTGGGTGCAAAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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CDS CAA 72 bp | ACAGGTGGCGCTCTAAGCGAGTCCGGTCCACATCCTTaGGCAGTCGGTTCCTTCCTCTTGTGGTCACCAGTA | + |
Preference number: 6 (lower is better) Translates to: TGGALSESGPHP*AVGSFLLWSPV Trigger: TACTGGTGACCACAAGAGGAAGGAACCGACTGCCAAAGGATGTGGACCGGACTCGCTTAGAGCGCCACCTGT 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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CDS TCA 72 bp | TTTGGGGGACCCATGGTAGGTCCAATACTCAGACTCTaGAGCATAGTAGGGGTCTGGCGAGTAGGCTGGGCT | + |
Preference number: 6 (lower is better) Translates to: FGGPMVGPILRL*SIVGVWRVGWA Trigger: AGCCCAGCCTACTCGCCAGACCCCTACTATGCTTCAGAGTCTGAGTATTGGACCTACCATGGGTCCCCCAAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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CDS CAA 90 bp | TCTCTCCAGCTGGGATGTGAAAGTGCTTGGGAGCCTGGTAAGAGGTaGGCGTGGAGGACCTCACATCTAATTGGCTATGGTATGGGGAGC | + |
Preference number: 6 (lower is better) Translates to: SLQLGCESAWEPGKR*AWRTSHLIGYGMGS Trigger: GCTCCCCATACCATAGCCAATTAGATGTGAGGTCCTCCACGCCAACCTCTTACCAGGCTCCCAAGCACTTTCACATCCCAGCTGGAGAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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CDS GCA 72 bp | ATGACGCTACAGGTCTGGCATTTGAAACAGCTGACGTaGCACTGCTTGTCCAGTGCCAGAAGTGACTGGCCA | + |
Preference number: 6 (lower is better) Translates to: MTLQVWHLKQLT*HCLSSARSDWP Trigger: TGGCCAGTCACTTCTGGCACTGGACAAGCAGTGGCACGTCAGCTGTTTCAAATGCCAGACCTGTAGCGTCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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CDS CCA 72 bp | TGGCCATGTTTAATCTCCTCTTTGCACCCAGCACAGTaGCTTGGTCCACGGATCTTGATCGGCTTGCTGCTG | + |
Preference number: 6 (lower is better) Translates to: WPCLISSLHPAQ*LGPRILIGLLL Trigger: CAGCAGCAAGCCGATCAAGATCCGTGGACCAAGCCACTGTGCTGGGTGCAAAGAGGAGATTAAACATGGCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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CDS CCA 72 bp | AGATGTTACTCTCTCCAGCTGGGATGTGAAAGTGCTTaGGAGCCTGGTAAGAGGTTGGCGTGGAGGACCTCA | + |
Preference number: 6 (lower is better) Translates to: RCYSLQLGCESA*EPGKRLAWRTS Trigger: TGAGGTCCTCCACGCCAACCTCTTACCAGGCTCCCAAGCACTTTCACATCCCAGCTGGAGAGAGTAACATCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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CDS TCA 72 bp | TGGTCCACGGATCTTGATCGGCTTGCTGCTGGTCATTaGCTGGGAGCACGTCTGACATACACATTCTTTCCC | + |
Preference number: 6 (lower is better) Translates to: WSTDLDRLAAGH*LGARLTYTFFP Trigger: GGGAAAGAATGTGTATGTCAGACGTGCTCCCAGTCAATGACCAGCAGCAAGCCGATCAAGATCCGTGGACCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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CDS GCA 72 bp | AGGATAGATCTTGTACTCTCGCATGCCCCAGTTGACTaGGTTCATGCTGTCGTAGTGGAAGAGGTCCGCACT | + |
Preference number: 6 (lower is better) Translates to: RIDLVLSHAPVD*VHAVVVEEVRT Trigger: AGTGCGGACCTCTTCCACTACGACAGCATGAACGCAGTCAACTGGGGCATGCGAGAGTACAAGATCTATCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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CDS CAA 90 bp | CTAAGCGAGTCCGGTCCACATCCTTTGGCAGTCGGTTCCTTCCTCTaGTGGTCACCAGTAGCAGCTCATAAGGATAGATCTTGTACTCTC | + |
Preference number: 6 (lower is better) Translates to: LSESGPHPLAVGSFL*WSPVAAHKDRSCTL Trigger: GAGAGTACAAGATCTATCCTTATGAGCTGCTACTGGTGACCACAAGAGGAAGGAACCGACTGCCAAAGGATGTGGACCGGACTCGCTTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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CDS TCA 72 bp | CATAAGGATAGATCTTGTACTCTCGCATGCCCCAGTTaGCTGCGTTCATGCTGTCGTAGTGGAAGAGGTCCG | + |
Preference number: 6 (lower is better) Translates to: HKDRSCTLACPS*LRSCCRSGRGP Trigger: CGGACCTCTTCCACTACGACAGCATGAACGCAGTCAACTGGGGCATGCGAGAGTACAAGATCTATCCTTATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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CDS GCA 72 bp | CTACAGGTCTGGCATTTGAAACAGCTGACGTGCCACTaGTTGTCCAGTGCCAGAAGTGACTGGCCATGTTTA | + |
Preference number: 6 (lower is better) Translates to: LQVWHLKQLTCH*LSSARSDWPCL Trigger: TAAACATGGCCAGTCACTTCTGGCACTGGACAAGCAGTGGCACGTCAGCTGTTTCAAATGCCAGACCTGTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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CDS CAA 72 bp | TCCGGTCCACATCCTTTGGCAGTCGGTTCCTTCCTCTaGTGGTCACCAGTAGCAGCTCATAAGGATAGATCT | + |
Preference number: 6 (lower is better) Translates to: SGPHPLAVGSFL*WSPVAAHKDRS Trigger: AGATCTATCCTTATGAGCTGCTACTGGTGACCACAAGAGGAAGGAACCGACTGCCAAAGGATGTGGACCGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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CDS CCA 72 bp | GATGCCAAACTGGGAGTGGTAGTCAGACTCGCAGTATaGAACACCGTCTTTGCTAATGTATTCCCCAGTGAG | + |
Preference number: 6 (lower is better) Translates to: DAKLGVVVRLAV*NTVFANVFPSE Trigger: CTCACTGGGGAATACATTAGCAAAGACGGTGTTCCATACTGCGAGTCTGACTACCACTCCCAGTTTGGCATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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CDS CCA 72 bp | GGTCCACATCCTTTGGCAGTCGGTTCCTTCCTCTTGTaGTCACCAGTAGCAGCTCATAAGGATAGATCTTGT | + |
Preference number: 6 (lower is better) Translates to: GPHPLAVGSFLL*SPVAAHKDRSC Trigger: ACAAGATCTATCCTTATGAGCTGCTACTGGTGACCACAAGAGGAAGGAACCGACTGCCAAAGGATGTGGACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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CDS CAA 72 bp | CTATACTTGGAGGCCTGGCTGATGTCTTCACTTGTTTaGCTCTTGGTTGCTGTGGACAAATCACCATGCCGT | + |
Preference number: 6 (lower is better) Translates to: LYLEAWLMSSLV*LLVAVDKSPCR Trigger: ACGGCATGGTGATTTGTCCACAGCAACCAAGAGCAAAACAAGTGAAGACATCAGCCAGGCCTCCAAGTATAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |
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CDS GCA 72 bp | TTGCACCTCGTAGATGGACTTAACCTTGGGGAGAGCTaGCAGGTCTTTGTAATTAAGGATCTCATTATCCAC | + |
Preference number: 6 (lower is better) Translates to: LHLVDGLNLGES*QVFVIKDLIIH Trigger: GTGGATAATGAGATCCTTAATTACAAAGACCTGGCAGCTCTCCCCAAGGTTAAGTCCATCTACGAGGTGCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049378.15 ENSMUST00000166783.3 |