Pregenerated sensors for ABLIM2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029095Ensembl transcript IDs: ENSMUST00000054598.12, ENSMUST00000101280.10, ENSMUST00000114203.8, ENSMUST00000114204.8, ENSMUST00000114205.8, ENSMUST00000114206.9, ENSMUST00000114210.9, ENSMUST00000125378.2, ENSMUST00000129347.8, ENSMUST00000130233.8, ENSMUST00000150146.2, ENSMUST00000151322.8, ENSMUST00000151636.8, ENSMUST00000153529.2
Found 532 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ACAGGCAAGAGCATCCTTGCTATACAAGGGACCATGCCTGCTGGATaGTCCTCAGGGCCTGGCCCCACCCTGCCTCCTGCAGGCACCCTG | + |
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Preference number: 1 (lower is better) Translates to: TGKSILAIQGTMPAG*SSGPGPTLPPAGTL Trigger: CAGGGTGCCTGCAGGAGGCAGGGTGGGGCCAGGCCCTGAGGAGCATCCAGCAGGCATGGTCCCTTGTATAGCAAGGATGCTCTTGCCTGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
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| 3UTR TCA 90 bp | ATACAAAGGAGCAGGGACGAAGGGAAACAGACCGGCTCCTGTCTGTaGGGAGCGCGGAGGACTGGAAGCACAGAGGCCTGCACGGTGGGA | + |
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Preference number: 1 (lower is better) Translates to: IQRSRDEGKQTGSCL*GARRTGSTEACTVG Trigger: TCCCACCGTGCAGGCCTCTGTGCTTCCAGTCCTCCGCGCTCCTCACAGACAGGAGCCGGTCTGTTTCCCTTCGTCCCTGCTCCTTTGTAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
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| 3UTR GCA 90 bp | GTCCCACTGCCTCGCAGACTTTGGCCTGGCTCCCCTGCCTCAGTCTaGAAGGCTACTTGGTACCTCCTCACGCTCCGAGAAGTCTCACAC | + |
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Preference number: 1 (lower is better) Translates to: VPLPRRLWPGSPASV*KATWYLLTLREVSH Trigger: GTGTGAGACTTCTCGGAGCGTGAGGAGGTACCAAGTAGCCTTGCAGACTGAGGCAGGGGAGCCAGGCCAAAGTCTGCGAGGCAGTGGGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
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| 3UTR GCA 90 bp | CCCAGGTTGGAGGAGGCACCGCCTCTAGCTGTCCATCTCTGCCGCTaGAGTCAATGGCTGTGTCACGTGACAGCATGCTTCCTGGGCATG | + |
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Preference number: 1 (lower is better) Translates to: PRLEEAPPLAVHLCR*SQWLCHVTACFLGM Trigger: CATGCCCAGGAAGCATGCTGTCACGTGACACAGCCATTGACTGCAGCGGCAGAGATGGACAGCTAGAGGCGGTGCCTCCTCCAACCTGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054598.12 ENSMUST00000114206.9 |
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| 3UTR CCA 90 bp | GCTGGCTGCAACACTGCCCTGATGCCCAGTTGTGGCGGGAAGGAGTaGGTCAAGCTGGCACCTGGCCCTAAACTACAGGCAAGAGCATCC | + |
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Preference number: 1 (lower is better) Translates to: AGCNTALMPSCGGKE*VKLAPGPKLQARAS Trigger: GGATGCTCTTGCCTGTAGTTTAGGGCCAGGTGCCAGCTTGACCCACTCCTTCCCGCCACAACTGGGCATCAGGGCAGTGTTGCAGCCAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
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| 3UTR CCA 90 bp | CGCAGACTTTGGCCTGGCTCCCCTGCCTCAGTCTGCAAGGCTACTTaGTACCTCCTCACGCTCCGAGAAGTCTCACACTTACCATTCCTG | + |
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Preference number: 1 (lower is better) Translates to: RRLWPGSPASVCKAT*YLLTLREVSHLPFL Trigger: CAGGAATGGTAAGTGTGAGACTTCTCGGAGCGTGAGGAGGTACCAAGTAGCCTTGCAGACTGAGGCAGGGGAGCCAGGCCAAAGTCTGCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
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| 3UTR CCA 90 bp | ATAACTGTAGAAAACCTCCGTCCCACTGCCTCGCAGACTTTGGCCTaGCTCCCCTGCCTCAGTCTGCAAGGCTACTTGGTACCTCCTCAC | + |
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Preference number: 1 (lower is better) Translates to: ITVENLRPTASQTLA*LPCLSLQGYLVPPH Trigger: GTGAGGAGGTACCAAGTAGCCTTGCAGACTGAGGCAGGGGAGCCAGGCCAAAGTCTGCGAGGCAGTGGGACGGAGGTTTTCTACAGTTAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
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| 3UTR TCA 90 bp | GAGAAGTCTCACACTTACCATTCCTGCTGTGTCAGAGTCTGCCCCTaGCAAGTCTTTCACTCACGTCCCAGACACTCTGTGCCCCAGTGC | + |
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Preference number: 1 (lower is better) Translates to: EKSHTYHSCCVRVCP*QVFHSRPRHSVPQC Trigger: GCACTGGGGCACAGAGTGTCTGGGACGTGAGTGAAAGACTTGTCAGGGGCAGACTCTGACACAGCAGGAATGGTAAGTGTGAGACTTCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
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| 3UTR CCA 90 bp | GTGTCACGTGACAGCATGCTTCCTGGGCATGCGTGTTTTATGTGGTaGAGGGCTACAGTGAGTGTCTTTACTGGGAAGACTGGTCAGGTT | + |
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Preference number: 1 (lower is better) Translates to: VSRDSMLPGHACFMW*RATVSVFTGKTGQV Trigger: AACCTGACCAGTCTTCCCAGTAAAGACACTCACTGTAGCCCTCCACCACATAAAACACGCATGCCCAGGAAGCATGCTGTCACGTGACAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054598.12 ENSMUST00000114206.9 |
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| 3UTR-3UTR GCA 90 bp | GCCCCAGTGCCTAGCACAGGTGTGGGCACACCAGGTGCCCCGGAAAGGTGCTGGGGCCTGGCCCCACCCTaGCTCCTGCAGGCACCCTGC | + |
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Preference number: 2 (lower is better) Translates to: APVPSTGVGTPGAPERCWGLAPP*LLQAPC Trigger: GCAGGGTGCCTGCAGGAGGCAGGGTGGGGCCAGGCC...CCAGCACCTTTCCGGGGCACCTGGTGTGCCCACACCTGTGCTAGGCACTGGGGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
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| 3UTR-3UTR GCA 90 bp | GCATCCTTGCTATACAAGGGACCATGCCTGCTGGATGCTCCTCAGGGCCTGGCCGGCCTGGCCCCACCCTaGCTCCTGCAGGCACCCTGC | + |
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Preference number: 2 (lower is better) Translates to: ASLLYKGPCLLDAPQGLAGLAPP*LLQAPC Trigger: GCAGGGTGCCTGCAGGAGGCAGGGTGGGGCCAGGCC...GGCCAGGCCCTGAGGAGCATCCAGCAGGCATGGTCCCTTGTATAGCAAGGATGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
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| 3UTR-3UTR GCA 90 bp | GAGGAGCGCGGAGGACTGGAAGCACAGAGGCCTGCACGGTGGGAGTGGGGTGGGACAAGGGACCATGCCTaGTGGATGCTCCTCAGGGCC | + |
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Preference number: 2 (lower is better) Translates to: EERGGLEAQRPARWEWGGTRDHA*WMLLRA Trigger: GGCCCTGAGGAGCATCCAGCAGGCATGGTCCCTTGT...CCCACCCCACTCCCACCGTGCAGGCCTCTGTGCTTCCAGTCCTCCGCGCTCCTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
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| 3UTR-3UTR TCA 90 bp | GAGGAGCGCGGAGGACTGGAAGCACAGAGGCCTGCACGGTGGGAGTGGGGTGGGCCCTGCCTGCCCTACTaGCACAGAGAAGCAGAGCAA | + |
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Preference number: 2 (lower is better) Translates to: EERGGLEAQRPARWEWGGPCLPY*HREAEQ Trigger: TTGCTCTGCTTCTCTGTGTCAGTAGGGCAGGCAGGG...CCCACCCCACTCCCACCGTGCAGGCCTCTGTGCTTCCAGTCCTCCGCGCTCCTC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
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| 3UTR-3UTR GCA 90 bp | AAGGTGCTGGGCTGGCTGACTGCTCTGTCCCTATCTCCTAGGATAGCTGGCTGCGGCCTGGCCCCACCCTaGCTCCTGCAGGCACCCTGC | + |
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Preference number: 2 (lower is better) Translates to: KVLGWLTALSLSPRIAGCGLAPP*LLQAPC Trigger: GCAGGGTGCCTGCAGGAGGCAGGGTGGGGCCAGGCC...GCAGCCAGCTATCCTAGGAGATAGGGACAGAGCAGTCAGCCAGCCCAGCACCTT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
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| 3UTR-3UTR GCA 90 bp | CCTGCTGTGTCAGAGTCTGCCCCTGACAAGTCTTTCACTCACGTCCCAGACACTGGCCTGGCCCCACCCTaGCTCCTGCAGGCACCCTGC | + |
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Preference number: 2 (lower is better) Translates to: PAVSESAPDKSFTHVPDTGLAPP*LLQAPC Trigger: GCAGGGTGCCTGCAGGAGGCAGGGTGGGGCCAGGCC...AGTGTCTGGGACGTGAGTGAAAGACTTGTCAGGGGCAGACTCTGACACAGCAGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
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| 3UTR-3UTR GCA 90 bp | CGCAGACTTTGGCCTGGCTCCCCTGCCTCAGTCTGCAAGGCTACTTGGTACCTCACCATGCCTGCTGGATaGTCCTCAGGGCCTGGCCCC | + |
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Preference number: 2 (lower is better) Translates to: RRLWPGSPASVCKATWYLTMPAG*SSGPGP Trigger: GGGGCCAGGCCCTGAGGAGCATCCAGCAGGCATGGT...GAGGTACCAAGTAGCCTTGCAGACTGAGGCAGGGGAGCCAGGCCAAAGTCTGCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
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| 3UTR-3UTR GCA 90 bp | TTGGCCTGGCTCCCCTGCCTCAGTCTGCAAGGCTACTTGGTACCTCCTCACGCTACCATGCCTGCTGGATaGTCCTCAGGGCCTGGCCCC | + |
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Preference number: 2 (lower is better) Translates to: LAWLPCLSLQGYLVPPHATMPAG*SSGPGP Trigger: GGGGCCAGGCCCTGAGGAGCATCCAGCAGGCATGGT...AGCGTGAGGAGGTACCAAGTAGCCTTGCAGACTGAGGCAGGGGAGCCAGGCCAA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
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| 3UTR-3UTR CCA 90 bp | GCCCCAGTGCCTAGCACAGGTGTGGGCACACCAGGTGCCCCGGAAAGGTGCTGGGTCTGCAAGGCTACTTaGTACCTCCTCACGCTCCGA | + |
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Preference number: 2 (lower is better) Translates to: APVPSTGVGTPGAPERCWVCKAT*YLLTLR Trigger: TCGGAGCGTGAGGAGGTACCAAGTAGCCTTGCAGAC...CCAGCACCTTTCCGGGGCACCTGGTGTGCCCACACCTGTGCTAGGCACTGGGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
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| 3UTR-3UTR GCA 90 bp | CACTGCCCTGATGCCCAGTTGTGGCGGGAAGGAGTGGGTCAAGCTGGCACCTGGTGCAGGCACCCTGCCTaGCCTACTGACACAGAGAAG | + |
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Preference number: 2 (lower is better) Translates to: HCPDAQLWREGVGQAGTWCRHPA*PTDTEK Trigger: CTTCTCTGTGTCAGTAGGGCAGGCAGGGTGCCTGCA...CCAGGTGCCAGCTTGACCCACTCCTTCCCGCCACAACTGGGCATCAGGGCAGTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
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| 3UTR-3UTR GCA 90 bp | TCGCAGACTTTGGCCTGGCTCCCCTGCCTCAGTCTGCAAGGCTACTTGGTACCTACCATGCCTGCTGGATaGTCCTCAGGGCCTGGCCCC | + |
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Preference number: 2 (lower is better) Translates to: SQTLAWLPCLSLQGYLVPTMPAG*SSGPGP Trigger: GGGGCCAGGCCCTGAGGAGCATCCAGCAGGCATGGT...AGGTACCAAGTAGCCTTGCAGACTGAGGCAGGGGAGCCAGGCCAAAGTCTGCGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
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| 3UTR-3UTR GCA 90 bp | CACACCAGGTGCCCCGGAAAGGTGCTGGGCTGGCTGACTGCTCTGTCCCTATCTACAAGGGACCATGCCTaGTGGATGCTCCTCAGGGCC | + |
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Preference number: 2 (lower is better) Translates to: HTRCPGKVLGWLTALSLSTRDHA*WMLLRA Trigger: GGCCCTGAGGAGCATCCAGCAGGCATGGTCCCTTGT...AGATAGGGACAGAGCAGTCAGCCAGCCCAGCACCTTTCCGGGGCACCTGGTGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
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| 3UTR-3UTR GCA 90 bp | GCCCCAGTGCCTAGCACAGGTGTGGGCACACCAGGTGCCCCGGAAAGGTGCTGGCACACTTACCATTCCTaGTGTGTCAGAGTCTGCCCC | + |
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Preference number: 2 (lower is better) Translates to: APVPSTGVGTPGAPERCWHTYHS*CVRVCP Trigger: GGGGCAGACTCTGACACAGCAGGAATGGTAAGTGTG...CCAGCACCTTTCCGGGGCACCTGGTGTGCCCACACCTGTGCTAGGCACTGGGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
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| 3UTR-3UTR TCA 90 bp | GCATCCTTGCTATACAAGGGACCATGCCTGCTGGATGCTCCTCAGGGCCTGGCCAGGTGCTGGGCTGGCTaGCTGCTCTGTCCCTATCTC | + |
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Preference number: 2 (lower is better) Translates to: ASLLYKGPCLLDAPQGLARCWAG*LLCPYL Trigger: GAGATAGGGACAGAGCAGTCAGCCAGCCCAGCACCT...GGCCAGGCCCTGAGGAGCATCCAGCAGGCATGGTCCCTTGTATAGCAAGGATGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
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| 3UTR-3UTR TCA 90 bp | CCAGTTGTGGCGGGAAGGAGTGGGTCAAGCTGGCACCTGGCCCTAAACTACAGGCCCTGCCTGCCCTACTaGCACAGAGAAGCAGAGCAA | + |
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Preference number: 2 (lower is better) Translates to: PVVAGRSGSSWHLALNYRPCLPY*HREAEQ Trigger: TTGCTCTGCTTCTCTGTGTCAGTAGGGCAGGCAGGG...CCTGTAGTTTAGGGCCAGGTGCCAGCTTGACCCACTCCTTCCCGCCACAACTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
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| 3UTR-3UTR TCA 90 bp | GCAAGAGCATCCTTGCTATACAAGGGACCATGCCTGCTGGATGCTCCTCAGGGCGCTGCAACACTGCCCTaGTGCCCAGTTGTGGCGGGA | + |
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Preference number: 2 (lower is better) Translates to: ARASLLYKGPCLLDAPQGAATLP*CPVVAG Trigger: TCCCGCCACAACTGGGCATCAGGGCAGTGTTGCAGC...GCCCTGAGGAGCATCCAGCAGGCATGGTCCCTTGTATAGCAAGGATGCTCTTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
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| 3UTR-3UTR GCA 90 bp | CCTCGCAGACTTTGGCCTGGCTCCCCTGCCTCAGTCTGCAAGGCTACTTGGTACTGCAGGCACCCTGCCTaGCCTACTGACACAGAGAAG | + |
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Preference number: 2 (lower is better) Translates to: PRRLWPGSPASVCKATWYCRHPA*PTDTEK Trigger: CTTCTCTGTGTCAGTAGGGCAGGCAGGGTGCCTGCA...GTACCAAGTAGCCTTGCAGACTGAGGCAGGGGAGCCAGGCCAAAGTCTGCGAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
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| 3UTR-3UTR GCA 90 bp | GTCTCACACTTACCATTCCTGCTGTGTCAGAGTCTGCCCCTGACAAGTCTTTCAGGCCTGGCCCCACCCTaGCTCCTGCAGGCACCCTGC | + |
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Preference number: 2 (lower is better) Translates to: VSHLPFLLCQSLPLTSLSGLAPP*LLQAPC Trigger: GCAGGGTGCCTGCAGGAGGCAGGGTGGGGCCAGGCC...TGAAAGACTTGTCAGGGGCAGACTCTGACACAGCAGGAATGGTAAGTGTGAGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
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| 3UTR-3UTR GCA 90 bp | AGACTTTGGCCTGGCTCCCCTGCCTCAGTCTGCAAGGCTACTTGGTACCTCCTCCACTCTGTGCCCCAGTaGCTAGCACAGGTGTGGGCA | + |
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Preference number: 2 (lower is better) Translates to: RLWPGSPASVCKATWYLLHSVPQ*LAQVWA Trigger: TGCCCACACCTGTGCTAGGCACTGGGGCACAGAGTG...GAGGAGGTACCAAGTAGCCTTGCAGACTGAGGCAGGGGAGCCAGGCCAAAGTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
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| 3UTR-3UTR GCA 90 bp | GACTTTGGCCTGGCTCCCCTGCCTCAGTCTGCAAGGCTACTTGGTACCTCCTCACACTCTGTGCCCCAGTaGCTAGCACAGGTGTGGGCA | + |
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Preference number: 2 (lower is better) Translates to: DFGLAPLPQSARLLGTSSHSVPQ*LAQVWA Trigger: TGCCCACACCTGTGCTAGGCACTGGGGCACAGAGTG...TGAGGAGGTACCAAGTAGCCTTGCAGACTGAGGCAGGGGAGCCAGGCCAAAGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
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| 3UTR-3UTR CCA 90 bp | ACTGCTCTGTCCCTATCTCCTAGGATAGCTGGCTGCAACACTGCCCTGATGCCCTGTGGCGGGAAGGAGTaGGTCAAGCTGGCACCTGGC | + |
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Preference number: 2 (lower is better) Translates to: TALSLSPRIAGCNTALMPCGGKE*VKLAPG Trigger: GCCAGGTGCCAGCTTGACCCACTCCTTCCCGCCACA...GGGCATCAGGGCAGTGTTGCAGCCAGCTATCCTAGGAGATAGGGACAGAGCAGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
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| 3UTR-3UTR TCA 90 bp | AAGGTGCTGGGCTGGCTGACTGCTCTGTCCCTATCTCCTAGGATAGCTGGCTGCCCCTGCCTGCCCTACTaGCACAGAGAAGCAGAGCAA | + |
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Preference number: 2 (lower is better) Translates to: KVLGWLTALSLSPRIAGCPCLPY*HREAEQ Trigger: TTGCTCTGCTTCTCTGTGTCAGTAGGGCAGGCAGGG...GCAGCCAGCTATCCTAGGAGATAGGGACAGAGCAGTCAGCCAGCCCAGCACCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
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| 3UTR-3UTR GCA 90 bp | ACCATTCCTGCTGTGTCAGAGTCTGCCCCTGACAAGTCTTTCACTCACGTCCCAACCATGCCTGCTGGATaGTCCTCAGGGCCTGGCCCC | + |
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Preference number: 2 (lower is better) Translates to: TIPAVSESAPDKSFTHVPTMPAG*SSGPGP Trigger: GGGGCCAGGCCCTGAGGAGCATCCAGCAGGCATGGT...TGGGACGTGAGTGAAAGACTTGTCAGGGGCAGACTCTGACACAGCAGGAATGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
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| 3UTR-3UTR GCA 90 bp | TCCTCACGCTCCGAGAAGTCTCACACTTACCATTCCTGCTGTGTCAGAGTCTGCTGTGGGCACACCAGGTaGCCCGGAAAGGTGCTGGGC | + |
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Preference number: 2 (lower is better) Translates to: SSRSEKSHTYHSCCVRVCCGHTR*PGKVLG Trigger: GCCCAGCACCTTTCCGGGGCACCTGGTGTGCCCACA...GCAGACTCTGACACAGCAGGAATGGTAAGTGTGAGACTTCTCGGAGCGTGAGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
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| 3UTR-3UTR CCA 90 bp | AGACTTTGGCCTGGCTCCCCTGCCTCAGTCTGCAAGGCTACTTGGTACCTCCTCGGAAAGGTGCTGGGCTaGCTGACTGCTCTGTCCCTA | + |
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Preference number: 2 (lower is better) Translates to: RLWPGSPASVCKATWYLLGKVLG*LTALSL Trigger: TAGGGACAGAGCAGTCAGCCAGCCCAGCACCTTTCC...GAGGAGGTACCAAGTAGCCTTGCAGACTGAGGCAGGGGAGCCAGGCCAAAGTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
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| 3UTR-3UTR CCA 90 bp | GAGGAGGGGACAGCTAGAGTCACCCAGGACCACAGTGTCCACCCATTCTGCAGCGTCTGCAAGGCTACTTaGTACCTCCTCACGCTCCGA | + |
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Preference number: 2 (lower is better) Translates to: EEGTARVTQDHSVHPFCSVCKAT*YLLTLR Trigger: TCGGAGCGTGAGGAGGTACCAAGTAGCCTTGCAGAC...GCTGCAGAATGGGTGGACACTGTGGTCCTGGGTGACTCTAGCTGTCCCCTCCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054598.12 ENSMUST00000114206.9 |
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| 3UTR-3UTR CCA 90 bp | AGGTTGGAGGAGGCACCGCCTCTAGCTGTCCATCTCTGCCGCTGCAGTCAATGGGTCTGCAAGGCTACTTaGTACCTCCTCACGCTCCGA | + |
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Preference number: 2 (lower is better) Translates to: RLEEAPPLAVHLCRCSQWVCKAT*YLLTLR Trigger: TCGGAGCGTGAGGAGGTACCAAGTAGCCTTGCAGAC...CCATTGACTGCAGCGGCAGAGATGGACAGCTAGAGGCGGTGCCTCCTCCAACCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054598.12 ENSMUST00000114206.9 |
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| 3UTR-3UTR CCA 90 bp | GCTGTGTCAGAGTCTGCCCCTGACAAGTCTTTCACTCACGTCCCAGACACTCTGCTGCCTCGCAGACTTTaGCCTGGCTCCCCTGCCTCA | + |
|
Preference number: 2 (lower is better) Translates to: AVSESAPDKSFTHVPDTLLPRRL*PGSPAS Trigger: TGAGGCAGGGGAGCCAGGCCAAAGTCTGCGAGGCAG...CAGAGTGTCTGGGACGTGAGTGAAAGACTTGTCAGGGGCAGACTCTGACACAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
||
| 3UTR-3UTR CCA 90 bp | CACTGCCCTGATGCCCAGTTGTGGCGGGAAGGAGTGGGTCAAGCTGGCACCTGGTCCGGTCCACGTCTTTaGGCAGTTTCACACGAATTC | + |
|
Preference number: 2 (lower is better) Translates to: HCPDAQLWREGVGQAGTWSGPRL*AVSHEF Trigger: GAATTCGTGTGAAACTGCCCAAAGACGTGGACCGGA...CCAGGTGCCAGCTTGACCCACTCCTTCCCGCCACAACTGGGCATCAGGGCAGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114210.9 |
||
| 3UTR-3UTR TCA 90 bp | CCTGCTGTGTCAGAGTCTGCCCCTGACAAGTCTTTCACTCACGTCCCAGACACTAGGTGCTGGGCTGGCTaGCTGCTCTGTCCCTATCTC | + |
|
Preference number: 2 (lower is better) Translates to: PAVSESAPDKSFTHVPDTRCWAG*LLCPYL Trigger: GAGATAGGGACAGAGCAGTCAGCCAGCCCAGCACCT...AGTGTCTGGGACGTGAGTGAAAGACTTGTCAGGGGCAGACTCTGACACAGCAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
||
| 3UTR-3UTR TCA 90 bp | CTCACGCTCCGAGAAGTCTCACACTTACCATTCCTGCTGTGTCAGAGTCTGCCCAGGTGCTGGGCTGGCTaGCTGCTCTGTCCCTATCTC | + |
|
Preference number: 2 (lower is better) Translates to: LTLREVSHLPFLLCQSLPRCWAG*LLCPYL Trigger: GAGATAGGGACAGAGCAGTCAGCCAGCCCAGCACCT...GGGCAGACTCTGACACAGCAGGAATGGTAAGTGTGAGACTTCTCGGAGCGTGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
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| 3UTR-3UTR GCA 90 bp | GCATCCTTGCTATACAAGGGACCATGCCTGCTGGATGCTCCTCAGGGCCTGGCCAGAAGCAGAGCAAGGTaGAGGAGGGGATTTTCAGGG | + |
|
Preference number: 2 (lower is better) Translates to: ASLLYKGPCLLDAPQGLARSRAR*RRGFSG Trigger: CCCTGAAAATCCCCTCCTGCACCTTGCTCTGCTTCT...GGCCAGGCCCTGAGGAGCATCCAGCAGGCATGGTCCCTTGTATAGCAAGGATGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
||
| 3UTR-3UTR GCA 90 bp | GCAAGAGCATCCTTGCTATACAAGGGACCATGCCTGCTGGATGCTCCTCAGGGCTGCAGGCACCCTGCCTaGCCTACTGACACAGAGAAG | + |
|
Preference number: 2 (lower is better) Translates to: ARASLLYKGPCLLDAPQGCRHPA*PTDTEK Trigger: CTTCTCTGTGTCAGTAGGGCAGGCAGGGTGCCTGCA...GCCCTGAGGAGCATCCAGCAGGCATGGTCCCTTGTATAGCAAGGATGCTCTTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
||
| 3UTR-3UTR GCA 90 bp | CTCACGCTCCGAGAAGTCTCACACTTACCATTCCTGCTGTGTCAGAGTCTGCCCACAAGGGACCATGCCTaGTGGATGCTCCTCAGGGCC | + |
|
Preference number: 2 (lower is better) Translates to: LTLREVSHLPFLLCQSLPTRDHA*WMLLRA Trigger: GGCCCTGAGGAGCATCCAGCAGGCATGGTCCCTTGT...GGGCAGACTCTGACACAGCAGGAATGGTAAGTGTGAGACTTCTCGGAGCGTGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
||
| 3UTR-3UTR GCA 90 bp | CGCAGACTTTGGCCTGGCTCCCCTGCCTCAGTCTGCAAGGCTACTTGGTACCTCCACACTTACCATTCCTaGTGTGTCAGAGTCTGCCCC | + |
|
Preference number: 2 (lower is better) Translates to: RRLWPGSPASVCKATWYLHTYHS*CVRVCP Trigger: GGGGCAGACTCTGACACAGCAGGAATGGTAAGTGTG...GAGGTACCAAGTAGCCTTGCAGACTGAGGCAGGGGAGCCAGGCCAAAGTCTGCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
||
| 3UTR-3UTR GCA 90 bp | GCTGTGTCAGAGTCTGCCCCTGACAAGTCTTTCACTCACGTCCCAGACACTCTGTTGGCCTGGCTCCCCTaGCTCAGTCTGCAAGGCTAC | + |
|
Preference number: 2 (lower is better) Translates to: AVSESAPDKSFTHVPDTLLAWLP*LSLQGY Trigger: GTAGCCTTGCAGACTGAGGCAGGGGAGCCAGGCCAA...CAGAGTGTCTGGGACGTGAGTGAAAGACTTGTCAGGGGCAGACTCTGACACAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
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| 3UTR-3UTR CCA 90 bp | TCACGTGACAGCATGCTTCCTGGGCATGCGTGTTTTATGTGGTGGAGGGCTACATGTGGCGGGAAGGAGTaGGTCAAGCTGGCACCTGGC | + |
|
Preference number: 2 (lower is better) Translates to: SRDSMLPGHACFMWWRATCGGKE*VKLAPG Trigger: GCCAGGTGCCAGCTTGACCCACTCCTTCCCGCCACA...TGTAGCCCTCCACCACATAAAACACGCATGCCCAGGAAGCATGCTGTCACGTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054598.12 ENSMUST00000114206.9 |
||
| 3UTR-3UTR CCA 90 bp | TGGTACCTCCTCACGCTCCGAGAAGTCTCACACTTACCATTCCTGCTGTGTCAGTGTGGCGGGAAGGAGTaGGTCAAGCTGGCACCTGGC | + |
|
Preference number: 2 (lower is better) Translates to: WYLLTLREVSHLPFLLCQCGGKE*VKLAPG Trigger: GCCAGGTGCCAGCTTGACCCACTCCTTCCCGCCACA...CTGACACAGCAGGAATGGTAAGTGTGAGACTTCTCGGAGCGTGAGGAGGTACCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
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| 3UTR-3UTR CCA 90 bp | CTCACGCTCCGAGAAGTCTCACACTTACCATTCCTGCTGTGTCAGAGTCTGCCCTCGCAGACTTTGGCCTaGCTCCCCTGCCTCAGTCTG | + |
|
Preference number: 2 (lower is better) Translates to: LTLREVSHLPFLLCQSLPSQTLA*LPCLSL Trigger: CAGACTGAGGCAGGGGAGCCAGGCCAAAGTCTGCGA...GGGCAGACTCTGACACAGCAGGAATGGTAAGTGTGAGACTTCTCGGAGCGTGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
||
| 3UTR CAA 90 bp | TCGCAGACTTTGGCCTGGCTCCCCTGCCTCAGTCTGCAAGGCTACTaGGTACCTCCTCACGCTCCGAGAAGTCTCACACTTACCATTCCT | + |
|
Preference number: 2 (lower is better) Translates to: SQTLAWLPCLSLQGY*VPPHAPRSLTLTIP Trigger: AGGAATGGTAAGTGTGAGACTTCTCGGAGCGTGAGGAGGTACCAAGTAGCCTTGCAGACTGAGGCAGGGGAGCCAGGCCAAAGTCTGCGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
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| 3UTR-3UTR TCA 90 bp | CTGTGTCAGAGTCTGCCCCTGACAAGTCTTTCACTCACGTCCCAGACACTCTGTAGGTGCTGGGCTGGCTaGCTGCTCTGTCCCTATCTC | + |
|
Preference number: 2 (lower is better) Translates to: LCQSLPLTSLSLTSQTLCRCWAG*LLCPYL Trigger: GAGATAGGGACAGAGCAGTCAGCCAGCCCAGCACCT...ACAGAGTGTCTGGGACGTGAGTGAAAGACTTGTCAGGGGCAGACTCTGACACAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
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| 3UTR-3UTR GCA 90 bp | CTCACGCTCCGAGAAGTCTCACACTTACCATTCCTGCTGTGTCAGAGTCTGCCCTGCAGGCACCCTGCCTaGCCTACTGACACAGAGAAG | + |
|
Preference number: 2 (lower is better) Translates to: LTLREVSHLPFLLCQSLPCRHPA*PTDTEK Trigger: CTTCTCTGTGTCAGTAGGGCAGGCAGGGTGCCTGCA...GGGCAGACTCTGACACAGCAGGAATGGTAAGTGTGAGACTTCTCGGAGCGTGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
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| 3UTR-3UTR GCA 90 bp | CTCACACTTACCATTCCTGCTGTGTCAGAGTCTGCCCCTGACAAGTCTTTCACTTGTGGGCACACCAGGTaGCCCGGAAAGGTGCTGGGC | + |
|
Preference number: 2 (lower is better) Translates to: LTLTIPAVSESAPDKSFTCGHTR*PGKVLG Trigger: GCCCAGCACCTTTCCGGGGCACCTGGTGTGCCCACA...AGTGAAAGACTTGTCAGGGGCAGACTCTGACACAGCAGGAATGGTAAGTGTGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
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| 3UTR-3UTR GCA 90 bp | TGGTACCTCCTCACGCTCCGAGAAGTCTCACACTTACCATTCCTGCTGTGTCAGCACTCTGTGCCCCAGTaGCTAGCACAGGTGTGGGCA | + |
|
Preference number: 2 (lower is better) Translates to: WYLLTLREVSHLPFLLCQHSVPQ*LAQVWA Trigger: TGCCCACACCTGTGCTAGGCACTGGGGCACAGAGTG...CTGACACAGCAGGAATGGTAAGTGTGAGACTTCTCGGAGCGTGAGGAGGTACCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
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| 3UTR-3UTR GCA 90 bp | CCGAGAAGTCTCACACTTACCATTCCTGCTGTGTCAGAGTCTGCCCCTGACAAGCACTCTGTGCCCCAGTaGCTAGCACAGGTGTGGGCA | + |
|
Preference number: 2 (lower is better) Translates to: PRSLTLTIPAVSESAPDKHSVPQ*LAQVWA Trigger: TGCCCACACCTGTGCTAGGCACTGGGGCACAGAGTG...CTTGTCAGGGGCAGACTCTGACACAGCAGGAATGGTAAGTGTGAGACTTCTCGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
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| 3UTR-3UTR GCA 90 bp | GACTTTGGCCTGGCTCCCCTGCCTCAGTCTGCAAGGCTACTTGGTACCTCCTCACACACTTACCATTCCTaGTGTGTCAGAGTCTGCCCC | + |
|
Preference number: 2 (lower is better) Translates to: DFGLAPLPQSARLLGTSSHTYHS*CVRVCP Trigger: GGGGCAGACTCTGACACAGCAGGAATGGTAAGTGTG...TGAGGAGGTACCAAGTAGCCTTGCAGACTGAGGCAGGGGAGCCAGGCCAAAGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
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| 3UTR-3UTR CCA 90 bp | CTCACGCTCCGAGAAGTCTCACACTTACCATTCCTGCTGTGTCAGAGTCTGCCCGGAAAGGTGCTGGGCTaGCTGACTGCTCTGTCCCTA | + |
|
Preference number: 2 (lower is better) Translates to: LTLREVSHLPFLLCQSLPGKVLG*LTALSL Trigger: TAGGGACAGAGCAGTCAGCCAGCCCAGCACCTTTCC...GGGCAGACTCTGACACAGCAGGAATGGTAAGTGTGAGACTTCTCGGAGCGTGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
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| 3UTR-3UTR CCA 90 bp | CCGAGAAGTCTCACACTTACCATTCCTGCTGTGTCAGAGTCTGCCCCTGACAAGTCGCAGACTTTGGCCTaGCTCCCCTGCCTCAGTCTG | + |
|
Preference number: 2 (lower is better) Translates to: PRSLTLTIPAVSESAPDKSQTLA*LPCLSL Trigger: CAGACTGAGGCAGGGGAGCCAGGCCAAAGTCTGCGA...CTTGTCAGGGGCAGACTCTGACACAGCAGGAATGGTAAGTGTGAGACTTCTCGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
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| 3UTR-3UTR CCA 90 bp | CTGAGCGAGCGAGTGAGTGTCTTTGAGGCTGTCTGTGTGACACATACAAAGGAGCTGCCTCGCAGACTTTaGCCTGGCTCCCCTGCCTCA | + |
|
Preference number: 2 (lower is better) Translates to: LSERVSVFEAVCVTHTKELPRRL*PGSPAS Trigger: TGAGGCAGGGGAGCCAGGCCAAAGTCTGCGAGGCAG...CTCCTTTGTATGTGTCACACAGACAGCCTCAAAGACACTCACTCGCTCGCTCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
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| 3UTR-3UTR CCA 90 bp | AGGTTGGAGGAGGCACCGCCTCTAGCTGTCCATCTCTGCCGCTGCAGTCAATGGGCGTGTTTTATGTGGTaGAGGGCTACAGTGAGTGTC | + |
|
Preference number: 2 (lower is better) Translates to: RLEEAPPLAVHLCRCSQWACFMW*RATVSV Trigger: GACACTCACTGTAGCCCTCCACCACATAAAACACGC...CCATTGACTGCAGCGGCAGAGATGGACAGCTAGAGGCGGTGCCTCCTCCAACCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054598.12 ENSMUST00000114206.9 |
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| 3UTR-3UTR GCA 90 bp | CTGAGCGAGCGAGTGAGTGTCTTTGAGGCTGTCTGTGTGACACATACAAAGGAGACAAGGGACCATGCCTaGTGGATGCTCCTCAGGGCC | + |
|
Preference number: 2 (lower is better) Translates to: LSERVSVFEAVCVTHTKETRDHA*WMLLRA Trigger: GGCCCTGAGGAGCATCCAGCAGGCATGGTCCCTTGT...CTCCTTTGTATGTGTCACACAGACAGCCTCAAAGACACTCACTCGCTCGCTCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
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| 3UTR-3UTR GCA 90 bp | CTGAGCGAGCGAGTGAGTGTCTTTGAGGCTGTCTGTGTGACACATACAAAGGAGTTGGCCTGGCTCCCCTaGCTCAGTCTGCAAGGCTAC | + |
|
Preference number: 2 (lower is better) Translates to: LSERVSVFEAVCVTHTKELAWLP*LSLQGY Trigger: GTAGCCTTGCAGACTGAGGCAGGGGAGCCAGGCCAA...CTCCTTTGTATGTGTCACACAGACAGCCTCAAAGACACTCACTCGCTCGCTCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
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| 3UTR-3UTR CCA 90 bp | GCAACCCAGAGGAGGGGACAGCTAGAGTCACCCAGGACCACAGTGTCCACCCATGAGACTAGGCCACAGTaGGGAAACCTTTATTCTAGG | + |
|
Preference number: 2 (lower is better) Translates to: ATQRRGQLESPRTTVSTHETRPQ*GNLYSR Trigger: CCTAGAATAAAGGTTTCCCCACTGTGGCCTAGTCTC...ATGGGTGGACACTGTGGTCCTGGGTGACTCTAGCTGTCCCCTCCTCTGGGTTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054598.12 ENSMUST00000114206.9 |
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| 3UTR-3UTR TCA 90 bp | CTGCTGAGCGAGCGAGTGAGTGTCTTTGAGGCTGTCTGTGTGACACATACAAAGCCCTGCCTGCCCTACTaGCACAGAGAAGCAGAGCAA | + |
|
Preference number: 2 (lower is better) Translates to: LLSERVSVFEAVCVTHTKPCLPY*HREAEQ Trigger: TTGCTCTGCTTCTCTGTGTCAGTAGGGCAGGCAGGG...CTTTGTATGTGTCACACAGACAGCCTCAAAGACACTCACTCGCTCGCTCAGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
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| 3UTR-3UTR GCA 90 bp | CCTGCTGTGTCAGAGTCTGCCCCTGACAAGTCTTTCACTCACGTCCCAGACACTAGAAGCAGAGCAAGGTaGAGGAGGGGATTTTCAGGG | + |
|
Preference number: 2 (lower is better) Translates to: PAVSESAPDKSFTHVPDTRSRAR*RRGFSG Trigger: CCCTGAAAATCCCCTCCTGCACCTTGCTCTGCTTCT...AGTGTCTGGGACGTGAGTGAAAGACTTGTCAGGGGCAGACTCTGACACAGCAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
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| 3UTR-3UTR GCA 90 bp | GTCTCACACTTACCATTCCTGCTGTGTCAGAGTCTGCCCCTGACAAGTCTTTCACACTCTGTGCCCCAGTaGCTAGCACAGGTGTGGGCA | + |
|
Preference number: 2 (lower is better) Translates to: VSHLPFLLCQSLPLTSLSHSVPQ*LAQVWA Trigger: TGCCCACACCTGTGCTAGGCACTGGGGCACAGAGTG...TGAAAGACTTGTCAGGGGCAGACTCTGACACAGCAGGAATGGTAAGTGTGAGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
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| 3UTR-3UTR GCA 90 bp | CTGCTGAGCGAGCGAGTGAGTGTCTTTGAGGCTGTCTGTGTGACACATACAAAGAAACCTCCGTCCCACTaGCTCGCAGACTTTGGCCTG | + |
|
Preference number: 2 (lower is better) Translates to: LLSERVSVFEAVCVTHTKKPPSH*LADFGL Trigger: CAGGCCAAAGTCTGCGAGGCAGTGGGACGGAGGTTT...CTTTGTATGTGTCACACAGACAGCCTCAAAGACACTCACTCGCTCGCTCAGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
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| 3UTR-3UTR CCA 90 bp | CCAGTTGTGGCGGGAAGGAGTGGGTCAAGCTGGCACCTGGCCCTAAACTACAGGATCCCAAACACTTCTTaGAACTCCTCAGGTGATAGG | + |
|
Preference number: 2 (lower is better) Translates to: PVVAGRSGSSWHLALNYRIPNTS*NSSGDR Trigger: CCTATCACCTGAGGAGTTCCAAGAAGTGTTTGGGAT...CCTGTAGTTTAGGGCCAGGTGCCAGCTTGACCCACTCCTTCCCGCCACAACTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114210.9 |
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| 3UTR-3UTR GCA 90 bp | CTGTGTCAGAGTCTGCCCCTGACAAGTCTTTCACTCACGTCCCAGACACTCTGTAGAAGCAGAGCAAGGTaGAGGAGGGGATTTTCAGGG | + |
|
Preference number: 2 (lower is better) Translates to: LCQSLPLTSLSLTSQTLCRSRAR*RRGFSG Trigger: CCCTGAAAATCCCCTCCTGCACCTTGCTCTGCTTCT...ACAGAGTGTCTGGGACGTGAGTGAAAGACTTGTCAGGGGCAGACTCTGACACAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
||
| 3UTR-3UTR GCA 90 bp | ACCATTCCTGCTGTGTCAGAGTCTGCCCCTGACAAGTCTTTCACTCACGTCCCAAGAAGCAGAGCAAGGTaGAGGAGGGGATTTTCAGGG | + |
|
Preference number: 2 (lower is better) Translates to: TIPAVSESAPDKSFTHVPRSRAR*RRGFSG Trigger: CCCTGAAAATCCCCTCCTGCACCTTGCTCTGCTTCT...TGGGACGTGAGTGAAAGACTTGTCAGGGGCAGACTCTGACACAGCAGGAATGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
||
| 3UTR-3UTR GCA 90 bp | CCGAGAAGTCTCACACTTACCATTCCTGCTGTGTCAGAGTCTGCCCCTGACAAGAGAAGCAGAGCAAGGTaGAGGAGGGGATTTTCAGGG | + |
|
Preference number: 2 (lower is better) Translates to: PRSLTLTIPAVSESAPDKRSRAR*RRGFSG Trigger: CCCTGAAAATCCCCTCCTGCACCTTGCTCTGCTTCT...CTTGTCAGGGGCAGACTCTGACACAGCAGGAATGGTAAGTGTGAGACTTCTCGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
||
| 3UTR-3UTR GCA 90 bp | TACATTTCACATGTATTTACAAACGGCACTGCTGAGCGAGCGAGTGAGTGTCTTTGTGGGCACACCAGGTaGCCCGGAAAGGTGCTGGGC | + |
|
Preference number: 2 (lower is better) Translates to: YISHVFTNGTAERASECLCGHTR*PGKVLG Trigger: GCCCAGCACCTTTCCGGGGCACCTGGTGTGCCCACA...AAGACACTCACTCGCTCGCTCAGCAGTGCCGTTTGTAAATACATGTGAAATGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
||
| 3UTR-3UTR GCA 90 bp | GAAACCTTTATTCTAGGGATTTGGCCATCAGGGGGCGCTCTTCTCTTAGCGACTAAACCTCCGTCCCACTaGCTCGCAGACTTTGGCCTG | + |
|
Preference number: 2 (lower is better) Translates to: ETFILGIWPSGGALLLATKPPSH*LADFGL Trigger: CAGGCCAAAGTCTGCGAGGCAGTGGGACGGAGGTTT...AGTCGCTAAGAGAAGAGCGCCCCCTGATGGCCAAATCCCTAGAATAAAGGTTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
||
| 3UTR-3UTR CCA 90 bp | GGAGATGGATACATTTCACATGTATTTACAAACGGCACTGCTGAGCGAGCGAGTAGGAGCGCGGAGGACTaGAAGCACAGAGGCCTGCAC | + |
|
Preference number: 2 (lower is better) Translates to: GDGYISHVFTNGTAERASRSAED*KHRGLH Trigger: GTGCAGGCCTCTGTGCTTCCAGTCCTCCGCGCTCCT...ACTCGCTCGCTCAGCAGTGCCGTTTGTAAATACATGTGAAATGTATCCATCTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
||
| 3UTR CAA 90 bp | TCCTCAGGTGATAGGTGTCTCTCCAGCCGTGTCCGGTCCACGTCTTaGGGCAGTTTCACACGAATTCGGTTTGTTACGATGAGGGAATCA | + |
|
Preference number: 2 (lower is better) Translates to: SSGDRCLSSRVRSTS*GSFTRIRFVTMRES Trigger: TGATTCCCTCATCGTAACAAACCGAATTCGTGTGAAACTGCCCAAAGACGTGGACCGGACACGGCTGGAGAGACACCTATCACCTGAGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114210.9 |
||
| 3UTR-3UTR TCA 90 bp | CTGAGCGAGCGAGTGAGTGTCTTTGAGGCTGTCTGTGTGACACATACAAAGGAGGCGAGTGAGTGTCTTTaGGGCTGTCTGTGTGACACA | + |
|
Preference number: 2 (lower is better) Translates to: LSERVSVFEAVCVTHTKEASECL*GCLCDT Trigger: TGTGTCACACAGACAGCCTCAAAGACACTCACTCGC...CTCCTTTGTATGTGTCACACAGACAGCCTCAAAGACACTCACTCGCTCGCTCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
||
| 3UTR-3UTR GCA 90 bp | ACTGCTCTGTCCCTATCTCCTAGGATAGCTGGCTGCAACACTGCCCTGATGCCCGGTCAAACTCCTCGATaGTCATCCCAAACACTTCTT | + |
|
Preference number: 2 (lower is better) Translates to: TALSLSPRIAGCNTALMPGQTPR*SSQTLL Trigger: AAGAAGTGTTTGGGATGAGCATCGAGGAGTTTGACC...GGGCATCAGGGCAGTGTTGCAGCCAGCTATCCTAGGAGATAGGGACAGAGCAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114210.9 |
||
| 3UTR-3UTR CCA 90 bp | TACATTTCACATGTATTTACAAACGGCACTGCTGAGCGAGCGAGTGAGTGTCTTACGGTGGGAGTGGGGTaGGGAGTTGTAAGGCGGAGG | + |
|
Preference number: 2 (lower is better) Translates to: YISHVFTNGTAERASECLTVGVG*GVVRRR Trigger: CCTCCGCCTTACAACTCCCCACCCCACTCCCACCGT...AAGACACTCACTCGCTCGCTCAGCAGTGCCGTTTGTAAATACATGTGAAATGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
||
| 3UTR-3UTR GCA 90 bp | TACATTTCACATGTATTTACAAACGGCACTGCTGAGCGAGCGAGTGAGTGTCTTACAAGGGACCATGCCTaGTGGATGCTCCTCAGGGCC | + |
|
Preference number: 2 (lower is better) Translates to: YISHVFTNGTAERASECLTRDHA*WMLLRA Trigger: GGCCCTGAGGAGCATCCAGCAGGCATGGTCCCTTGT...AAGACACTCACTCGCTCGCTCAGCAGTGCCGTTTGTAAATACATGTGAAATGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
||
| 3UTR-3UTR CCA 90 bp | GAAACCTTTATTCTAGGGATTTGGCCATCAGGGGGCGCTCTTCTCTTAGCGACTGAGACTAGGCCACAGTaGGGAAACCTTTATTCTAGG | + |
|
Preference number: 2 (lower is better) Translates to: ETFILGIWPSGGALLLATETRPQ*GNLYSR Trigger: CCTAGAATAAAGGTTTCCCCACTGTGGCCTAGTCTC...AGTCGCTAAGAGAAGAGCGCCCCCTGATGGCCAAATCCCTAGAATAAAGGTTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000054598.12 ENSMUST00000114206.9 |
||
| 3UTR-3UTR TCA 90 bp | GGAGATGGATACATTTCACATGTATTTACAAACGGCACTGCTGAGCGAGCGAGTTTGAGGCTGTCTGTGTaGCACATACAAAGGAGCAGG | + |
|
Preference number: 2 (lower is better) Translates to: GDGYISHVFTNGTAERASLRLSV*HIQRSR Trigger: CCTGCTCCTTTGTATGTGTCACACAGACAGCCTCAA...ACTCGCTCGCTCAGCAGTGCCGTTTGTAAATACATGTGAAATGTATCCATCTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
||
| 3UTR-3UTR CCA 90 bp | GGAGATGGATACATTTCACATGTATTTACAAACGGCACTGCTGAGCGAGCGAGTAGAGGGAAAAGGAGATaGATACATTTCACATGTATT | + |
|
Preference number: 2 (lower is better) Translates to: GDGYISHVFTNGTAERASRGKRR*IHFTCI Trigger: AATACATGTGAAATGTATCCATCTCCTTTTCCCTCT...ACTCGCTCGCTCAGCAGTGCCGTTTGTAAATACATGTGAAATGTATCCATCTCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
||
| 3UTR TCA 72 bp | AGCAGGGACGAAGGGAAACAGACCGGCTCCTGTCTGTaGGGAGCGCGGAGGACTGGAAGCACAGAGGCCTGC | + |
|
Preference number: 3 (lower is better) Translates to: SRDEGKQTGSCL*GARRTGSTEAC Trigger: GCAGGCCTCTGTGCTTCCAGTCCTCCGCGCTCCTCACAGACAGGAGCCGGTCTGTTTCCCTTCGTCCCTGCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
||
| 3UTR-3UTR CAA 90 bp | AGGTTGGAGGAGGCACCGCCTCTAGCTGTCCATCTCTGCCGCTGCAGTCAATGGACTGCCTCGCAGACTTaGGCCTGGCTCCCCTGCCTC | + |
|
Preference number: 3 (lower is better) Translates to: RLEEAPPLAVHLCRCSQWTASQT*AWLPCL Trigger: GAGGCAGGGGAGCCAGGCCAAAGTCTGCGAGGCAGT...CCATTGACTGCAGCGGCAGAGATGGACAGCTAGAGGCGGTGCCTCCTCCAACCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054598.12 ENSMUST00000114206.9 |
||
| 3UTR GCA 72 bp | CGTCCCACTGCCTCGCAGACTTTGGCCTGGCTCCCCTaGCTCAGTCTGCAAGGCTACTTGGTACCTCCTCAC | + |
|
Preference number: 3 (lower is better) Translates to: RPTASQTLAWLP*LSLQGYLVPPH Trigger: GTGAGGAGGTACCAAGTAGCCTTGCAGACTGAGGCAGGGGAGCCAGGCCAAAGTCTGCGAGGCAGTGGGACG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
||
| 3UTR GCA 72 bp | CCAGGACCACAGTGTCCACCCATTCTGCAGCAGGGGTaGTCTTCCATACCCGCTACCAGGGCCCCAGTTAGC | + |
|
Preference number: 3 (lower is better) Translates to: PGPQCPPILQQG*SSIPATRAPVS Trigger: GCTAACTGGGGCCCTGGTAGCGGGTATGGAAGAGCACCCCTGCTGCAGAATGGGTGGACACTGTGGTCCTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054598.12 ENSMUST00000114206.9 |
||
| 3UTR GCA 72 bp | CTACAGGCAAGAGCATCCTTGCTATACAAGGGACCATaGCTGCTGGATGCTCCTCAGGGCCTGGCCCCACCC | + |
|
Preference number: 3 (lower is better) Translates to: LQARASLLYKGP*LLDAPQGLAPP Trigger: GGGTGGGGCCAGGCCCTGAGGAGCATCCAGCAGGCATGGTCCCTTGTATAGCAAGGATGCTCTTGCCTGTAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
||
| 3UTR GCA 72 bp | CCTCGCAGACTTTGGCCTGGCTCCCCTGCCTCAGTCTaGAAGGCTACTTGGTACCTCCTCACGCTCCGAGAA | + |
|
Preference number: 3 (lower is better) Translates to: PRRLWPGSPASV*KATWYLLTLRE Trigger: TTCTCGGAGCGTGAGGAGGTACCAAGTAGCCTTGCAGACTGAGGCAGGGGAGCCAGGCCAAAGTCTGCGAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
||
| 3UTR CCA 72 bp | TGTGGGCACACCAGGTGCCCCGGAAAGGTGCTGGGCTaGCTGACTGCTCTGTCCCTATCTCCTAGGATAGCT | + |
|
Preference number: 3 (lower is better) Translates to: CGHTRCPGKVLG*LTALSLSPRIA Trigger: AGCTATCCTAGGAGATAGGGACAGAGCAGTCAGCCAGCCCAGCACCTTTCCGGGGCACCTGGTGTGCCCACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
||
| 3UTR GCA 72 bp | AGGTTGGAGGAGGCACCGCCTCTAGCTGTCCATCTCTaGCGCTGCAGTCAATGGCTGTGTCACGTGACAGCA | + |
|
Preference number: 3 (lower is better) Translates to: RLEEAPPLAVHL*RCSQWLCHVTA Trigger: TGCTGTCACGTGACACAGCCATTGACTGCAGCGGCAGAGATGGACAGCTAGAGGCGGTGCCTCCTCCAACCT 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054598.12 ENSMUST00000114206.9 |
||
| 3UTR CCA 72 bp | AACACTGCCCTGATGCCCAGTTGTGGCGGGAAGGAGTaGGTCAAGCTGGCACCTGGCCCTAAACTACAGGCA | + |
|
Preference number: 3 (lower is better) Translates to: NTALMPSCGGKE*VKLAPGPKLQA Trigger: TGCCTGTAGTTTAGGGCCAGGTGCCAGCTTGACCCACTCCTTCCCGCCACAACTGGGCATCAGGGCAGTGTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
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| 3UTR GCA 72 bp | CTGACTGCTCTGTCCCTATCTCCTAGGATAGCTGGCTaGAACACTGCCCTGATGCCCAGTTGTGGCGGGAAG | + |
|
Preference number: 3 (lower is better) Translates to: LTALSLSPRIAG*NTALMPSCGGK Trigger: CTTCCCGCCACAACTGGGCATCAGGGCAGTGTTGCAGCCAGCTATCCTAGGAGATAGGGACAGAGCAGTCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
||
| 3UTR CCA 72 bp | TGGCCTGGCTCCCCTGCCTCAGTCTGCAAGGCTACTTaGTACCTCCTCACGCTCCGAGAAGTCTCACACTTA | + |
|
Preference number: 3 (lower is better) Translates to: WPGSPASVCKAT*YLLTLREVSHL Trigger: TAAGTGTGAGACTTCTCGGAGCGTGAGGAGGTACCAAGTAGCCTTGCAGACTGAGGCAGGGGAGCCAGGCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
||
| 3UTR GCA 72 bp | TGCCGCTGCAGTCAATGGCTGTGTCACGTGACAGCATaGTTCCTGGGCATGCGTGTTTTATGTGGTGGAGGG | + |
|
Preference number: 3 (lower is better) Translates to: CRCSQWLCHVTA*FLGMRVLCGGG Trigger: CCCTCCACCACATAAAACACGCATGCCCAGGAAGCATGCTGTCACGTGACACAGCCATTGACTGCAGCGGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054598.12 ENSMUST00000114206.9 |
||
| 3UTR GCA 72 bp | TGGCACCTGGCCCTAAACTACAGGCAAGAGCATCCTTaGTATACAAGGGACCATGCCTGCTGGATGCTCCTC | + |
|
Preference number: 3 (lower is better) Translates to: WHLALNYRQEHP*YTRDHACWMLL Trigger: GAGGAGCATCCAGCAGGCATGGTCCCTTGTATAGCAAGGATGCTCTTGCCTGTAGTTTAGGGCCAGGTGCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
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| 3UTR TCA 72 bp | ACAAACGGCACTGCTGAGCGAGCGAGTGAGTGTCTTTaGGGCTGTCTGTGTGACACATACAAAGGAGCAGGG | + |
|
Preference number: 3 (lower is better) Translates to: TNGTAERASECL*GCLCDTYKGAG Trigger: CCCTGCTCCTTTGTATGTGTCACACAGACAGCCTCAAAGACACTCACTCGCTCGCTCAGCAGTGCCGTTTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
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| 3UTR TCA 72 bp | TCCATCTCTGCCGCTGCAGTCAATGGCTGTGTCACGTaGCAGCATGCTTCCTGGGCATGCGTGTTTTATGTG | + |
|
Preference number: 3 (lower is better) Translates to: SISAAAVNGCVT*QHASWACVFYV Trigger: CACATAAAACACGCATGCCCAGGAAGCATGCTGTCACGTGACACAGCCATTGACTGCAGCGGCAGAGATGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054598.12 ENSMUST00000114206.9 |
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| 3UTR TCA 72 bp | CAGCACAAAATGAGACTCAACACATGTCCCGGGATGTaGGAAAGTGAGGGCAACCCAGAGGAGGGGACAGCT | + |
|
Preference number: 3 (lower is better) Translates to: QHKMRLNTCPGM*ESEGNPEEGTA Trigger: AGCTGTCCCCTCCTCTGGGTTGCCCTCACTTTCTCACATCCCGGGACATGTGTTGAGTCTCATTTTGTGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054598.12 ENSMUST00000114206.9 |
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| 3UTR GCA 72 bp | ATCTATCACAATAACTGTAGAAAACCTCCGTCCCACTaGCTCGCAGACTTTGGCCTGGCTCCCCTGCCTCAG | + |
|
Preference number: 3 (lower is better) Translates to: IYHNNCRKPPSH*LADFGLAPLPQ Trigger: CTGAGGCAGGGGAGCCAGGCCAAAGTCTGCGAGGCAGTGGGACGGAGGTTTTCTACAGTTATTGTGATAGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
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| 3UTR CCA 72 bp | CTAGGCCACAGTGGGGAAACCTTTATTCTAGGGATTTaGCCATCAGGGGGCGCTCTTCTCTTAGCGACTTGG | + |
|
Preference number: 3 (lower is better) Translates to: LGHSGETFILGI*PSGGALLLATW Trigger: CCAAGTCGCTAAGAGAAGAGCGCCCCCTGATGGCCAAATCCCTAGAATAAAGGTTTCCCCACTGTGGCCTAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000054598.12 ENSMUST00000114206.9 |
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| 3UTR-3UTR CAA 90 bp | TCCTCACGCTCCGAGAAGTCTCACACTTACCATTCCTGCTGTGTCAGAGTCTGCGTCCGGTCCACGTCTTaGGGCAGTTTCACACGAATT | + |
|
Preference number: 3 (lower is better) Translates to: SSRSEKSHTYHSCCVRVCVRSTS*GSFTRI Trigger: AATTCGTGTGAAACTGCCCAAAGACGTGGACCGGAC...GCAGACTCTGACACAGCAGGAATGGTAAGTGTGAGACTTCTCGGAGCGTGAGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114210.9 |
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| 3UTR CCA 72 bp | CGTGACAGCATGCTTCCTGGGCATGCGTGTTTTATGTaGTGGAGGGCTACAGTGAGTGTCTTTACTGGGAAG | + |
|
Preference number: 3 (lower is better) Translates to: RDSMLPGHACFM*WRATVSVFTGK Trigger: CTTCCCAGTAAAGACACTCACTGTAGCCCTCCACCACATAAAACACGCATGCCCAGGAAGCATGCTGTCACG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054598.12 ENSMUST00000114206.9 |
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| CDS-3UTR CCA 90 bp | GAGGAGCGCGGAGGACTGGAAGCACAGAGGCCTGCACGGTGGGAGTGGGGTGGGCTGAGCCGGCAGAGCTaGGGCTGGAGGTCCTGCACT | + |
|
Preference number: 4 (lower is better) Translates to: EERGGLEAQRPARWEWGGLSRQS*GWRSCT Trigger: AGTGCAGGACCTCCAGCCCCAGCTCTGCCGGCTCAG...CCCACCCCACTCCCACCGTGCAGGCCTCTGTGCTTCCAGTCCTCCGCGCTCCTC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
||
| CDS-3UTR TCA 90 bp | CCCCAGTGCCTAGCACAGGTGTGGGCACACCAGGTGCCCCGGAAAGGTGCTGGGTTCTCCAGTGGGGCATaGGCAGCCTGGGGCTGCGAC | + |
|
Preference number: 4 (lower is better) Translates to: PQCLAQVWAHQVPRKGAGFSSGA*AAWGCD Trigger: GTCGCAGCCCCAGGCTGCTCATGCCCCACTGGAGAA...CCCAGCACCTTTCCGGGGCACCTGGTGTGCCCACACCTGTGCTAGGCACTGGGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
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| CDS-3UTR CCA 90 bp | CCCCAGTGCCTAGCACAGGTGTGGGCACACCAGGTGCCCCGGAAAGGTGCTGGGCGGCAGAGCTGGGGCTaGAGGTCCTGCACTGCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: PQCLAQVWAHQVPRKGAGRQSWG*RSCTAC Trigger: ACAAGCAGTGCAGGACCTCCAGCCCCAGCTCTGCCG...CCCAGCACCTTTCCGGGGCACCTGGTGTGCCCACACCTGTGCTAGGCACTGGGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
||
| CDS-3UTR TCA 90 bp | CACACCAGGTGCCCCGGAAAGGTGCTGGGCTGGCTGACTGCTCTGTCCCTATCTGTGTCCGAGGCTGACTaGGCCGGCAGAGCTGGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: HTRCPGKVLGWLTALSLSVSEAD*AGRAGA Trigger: AGCCCCAGCTCTGCCGGCTCAGTCAGCCTCGGACAC...AGATAGGGACAGAGCAGTCAGCCAGCCCAGCACCTTTCCGGGGCACCTGGTGTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
||
| CDS-3UTR GCA 90 bp | CCCCAGTGCCTAGCACAGGTGTGGGCACACCAGGTGCCCCGGAAAGGTGCTGGGGGCTGCCTGTCGACATaGCGGATGCCAGATGGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: PQCLAQVWAHQVPRKGAGGCLST*RMPDGG Trigger: TCCTCCATCTGGCATCCGGCATGTCGACAGGCAGCC...CCCAGCACCTTTCCGGGGCACCTGGTGTGCCCACACCTGTGCTAGGCACTGGGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
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| CDS-3UTR CCA 90 bp | GAGGAGCGCGGAGGACTGGAAGCACAGAGGCCTGCACGGTGGGAGTGGGGTGGGCCCTCTGAGAACATCTaGCCGCACCTGACGCATAGC | + |
|
Preference number: 4 (lower is better) Translates to: EERGGLEAQRPARWEWGGPSENI*PHLTHS Trigger: GCTATGCGTCAGGTGCGGCCAGATGTTCTCAGAGGG...CCCACCCCACTCCCACCGTGCAGGCCTCTGTGCTTCCAGTCCTCCGCGCTCCTC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
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| CDS-3UTR TCA 90 bp | GCCCCAGTGCCTAGCACAGGTGTGGGCACACCAGGTGCCCCGGAAAGGTGCTGGGGGCCTGGCCATTCTTaGTTTCTAAGCCACAGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: APVPSTGVGTPGAPERCWGPGHS*FLSHSP Trigger: GGGGCTGTGGCTTAGAAATCAAGAATGGCCAGGCCC...CCAGCACCTTTCCGGGGCACCTGGTGTGCCCACACCTGTGCTAGGCACTGGGGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
||
| CDS-3UTR TCA 90 bp | CCCAGTTGTGGCGGGAAGGAGTGGGTCAAGCTGGCACCTGGCCCTAAACTACAGGTGTCCGAGGCTGACTaGGCCGGCAGAGCTGGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: PSCGGKEWVKLAPGPKLQVSEAD*AGRAGA Trigger: AGCCCCAGCTCTGCCGGCTCAGTCAGCCTCGGACAC...CTGTAGTTTAGGGCCAGGTGCCAGCTTGACCCACTCCTTCCCGCCACAACTGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
||
| CDS-3UTR TCA 90 bp | CACTGCCCTGATGCCCAGTTGTGGCGGGAAGGAGTGGGTCAAGCTGGCACCTGGTGTAGTGTCCGAGGCTaGCTGAGCCGGCAGAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: HCPDAQLWREGVGQAGTWCSVRG*LSRQSW Trigger: CCAGCTCTGCCGGCTCAGTCAGCCTCGGACACTACA...CCAGGTGCCAGCTTGACCCACTCCTTCCCGCCACAACTGGGCATCAGGGCAGTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
||
| CDS-3UTR GCA 90 bp | GCCCCAGTGCCTAGCACAGGTGTGGGCACACCAGGTGCCCCGGAAAGGTGCTGGTACACAGGATCGCAGTaGTGGCCGGCTTCTCCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: APVPSTGVGTPGAPERCWYTGSQ*WPASPV Trigger: CACTGGAGAAGCCGGCCAGCACTGCGATCCTGTGTA...CCAGCACCTTTCCGGGGCACCTGGTGTGCCCACACCTGTGCTAGGCACTGGGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
||
| CDS-3UTR CCA 90 bp | GAGGAGCGCGGAGGACTGGAAGCACAGAGGCCTGCACGGTGGGAGTGGGGTGGGTGTTGCCCAGCAATGTaGGTGGGGAACACTTCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: EERGGLEAQRPARWEWGGCCPAM*VGNTSG Trigger: GCCAGAAGTGTTCCCCACCCACATTGCTGGGCAACA...CCCACCCCACTCCCACCGTGCAGGCCTCTGTGCTTCCAGTCCTCCGCGCTCCTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
||
| CDS-3UTR CCA 90 bp | CCCCAGTGCCTAGCACAGGTGTGGGCACACCAGGTGCCCCGGAAAGGTGCTGGGCCCTCTGAGAACATCTaGCCGCACCTGACGCATAGC | + |
|
Preference number: 4 (lower is better) Translates to: PQCLAQVWAHQVPRKGAGPSENI*PHLTHS Trigger: GCTATGCGTCAGGTGCGGCCAGATGTTCTCAGAGGG...CCCAGCACCTTTCCGGGGCACCTGGTGTGCCCACACCTGTGCTAGGCACTGGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
||
| CDS-3UTR TCA 90 bp | CACACCAGGTGCCCCGGAAAGGTGCTGGGCTGGCTGACTGCTCTGTCCCTATCTTGTAGTGTCCGAGGCTaGCTGAGCCGGCAGAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: HTRCPGKVLGWLTALSLSCSVRG*LSRQSW Trigger: CCAGCTCTGCCGGCTCAGTCAGCCTCGGACACTACA...AGATAGGGACAGAGCAGTCAGCCAGCCCAGCACCTTTCCGGGGCACCTGGTGTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
||
| CDS-3UTR CCA 90 bp | GCCCCAGTGCCTAGCACAGGTGTGGGCACACCAGGTGCCCCGGAAAGGTGCTGGGGTGGGGAACACTTCTaGCACATACACTCCTTCCCG | + |
|
Preference number: 4 (lower is better) Translates to: APVPSTGVGTPGAPERCWGGEHF*HIHSFP Trigger: CGGGAAGGAGTGTATGTGCCAGAAGTGTTCCCCACC...CCAGCACCTTTCCGGGGCACCTGGTGTGCCCACACCTGTGCTAGGCACTGGGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
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| CDS-3UTR CCA 90 bp | CCCCAGTGCCTAGCACAGGTGTGGGCACACCAGGTGCCCCGGAAAGGTGCTGGGATGCCGGATGCCAGATaGAGGAGCCTTGCAGGTACA | + |
|
Preference number: 4 (lower is better) Translates to: PQCLAQVWAHQVPRKGAGMPDAR*RSLAGT Trigger: TGTACCTGCAAGGCTCCTCCATCTGGCATCCGGCAT...CCCAGCACCTTTCCGGGGCACCTGGTGTGCCCACACCTGTGCTAGGCACTGGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
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| CDS-3UTR CCA 90 bp | CACACCAGGTGCCCCGGAAAGGTGCTGGGCTGGCTGACTGCTCTGTCCCTATCTCGGCAGAGCTGGGGCTaGAGGTCCTGCACTGCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: HTRCPGKVLGWLTALSLSRQSWG*RSCTAC Trigger: ACAAGCAGTGCAGGACCTCCAGCCCCAGCTCTGCCG...AGATAGGGACAGAGCAGTCAGCCAGCCCAGCACCTTTCCGGGGCACCTGGTGTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
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| CDS-3UTR CCA 90 bp | CCTCGCAGACTTTGGCCTGGCTCCCCTGCCTCAGTCTGCAAGGCTACTTGGTACCTGAGCCGGCAGAGCTaGGGCTGGAGGTCCTGCACT | + |
|
Preference number: 4 (lower is better) Translates to: PRRLWPGSPASVCKATWYLSRQS*GWRSCT Trigger: AGTGCAGGACCTCCAGCCCCAGCTCTGCCGGCTCAG...GTACCAAGTAGCCTTGCAGACTGAGGCAGGGGAGCCAGGCCAAAGTCTGCGAGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
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| CDS-3UTR CCA 90 bp | CGCAGACTTTGGCCTGGCTCCCCTGCCTCAGTCTGCAAGGCTACTTGGTACCTCCTGAGCCGGCAGAGCTaGGGCTGGAGGTCCTGCACT | + |
|
Preference number: 4 (lower is better) Translates to: RRLWPGSPASVCKATWYLLSRQS*GWRSCT Trigger: AGTGCAGGACCTCCAGCCCCAGCTCTGCCGGCTCAG...GAGGTACCAAGTAGCCTTGCAGACTGAGGCAGGGGAGCCAGGCCAAAGTCTGCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
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| CDS-3UTR TCA 90 bp | AAGGTGCTGGGCTGGCTGACTGCTCTGTCCCTATCTCCTAGGATAGCTGGCTGCTTCTCCAGTGGGGCATaGGCAGCCTGGGGCTGCGAC | + |
|
Preference number: 4 (lower is better) Translates to: KVLGWLTALSLSPRIAGCFSSGA*AAWGCD Trigger: GTCGCAGCCCCAGGCTGCTCATGCCCCACTGGAGAA...GCAGCCAGCTATCCTAGGAGATAGGGACAGAGCAGTCAGCCAGCCCAGCACCTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
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| CDS-3UTR TCA 90 bp | TCGCAGACTTTGGCCTGGCTCCCCTGCCTCAGTCTGCAAGGCTACTTGGTACCTTTCTCCAGTGGGGCATaGGCAGCCTGGGGCTGCGAC | + |
|
Preference number: 4 (lower is better) Translates to: SQTLAWLPCLSLQGYLVPFSSGA*AAWGCD Trigger: GTCGCAGCCCCAGGCTGCTCATGCCCCACTGGAGAA...AGGTACCAAGTAGCCTTGCAGACTGAGGCAGGGGAGCCAGGCCAAAGTCTGCGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
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| CDS-3UTR TCA 90 bp | AGACTTTGGCCTGGCTCCCCTGCCTCAGTCTGCAAGGCTACTTGGTACCTCCTCTTCTCCAGTGGGGCATaGGCAGCCTGGGGCTGCGAC | + |
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Preference number: 4 (lower is better) Translates to: RLWPGSPASVCKATWYLLFSSGA*AAWGCD Trigger: GTCGCAGCCCCAGGCTGCTCATGCCCCACTGGAGAA...GAGGAGGTACCAAGTAGCCTTGCAGACTGAGGCAGGGGAGCCAGGCCAAAGTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
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| CDS-3UTR TCA 90 bp | CACTGCCCTGATGCCCAGTTGTGGCGGGAAGGAGTGGGTCAAGCTGGCACCTGGACATCTGGCCGCACCTaGCGCATAGCGCACATGAAG | + |
|
Preference number: 4 (lower is better) Translates to: HCPDAQLWREGVGQAGTWTSGRT*RIAHMK Trigger: CTTCATGTGCGCTATGCGTCAGGTGCGGCCAGATGT...CCAGGTGCCAGCTTGACCCACTCCTTCCCGCCACAACTGGGCATCAGGGCAGTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
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| CDS-3UTR TCA 90 bp | TTGGCCTGGCTCCCCTGCCTCAGTCTGCAAGGCTACTTGGTACCTCCTCACGCTTGTAGTGTCCGAGGCTaGCTGAGCCGGCAGAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LAWLPCLSLQGYLVPPHACSVRG*LSRQSW Trigger: CCAGCTCTGCCGGCTCAGTCAGCCTCGGACACTACA...AGCGTGAGGAGGTACCAAGTAGCCTTGCAGACTGAGGCAGGGGAGCCAGGCCAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
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| CDS-3UTR GCA 90 bp | GCCCCAGTGCCTAGCACAGGTGTGGGCACACCAGGTGCCCCGGAAAGGTGCTGGGTAGAGGCTGTCCCCTaGCATTCTTTGGAGAGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: APVPSTGVGTPGAPERCWVEAVP*HSLERF Trigger: GAACCTCTCCAAAGAATGGCAGGGGACAGCCTCTAC...CCAGCACCTTTCCGGGGCACCTGGTGTGCCCACACCTGTGCTAGGCACTGGGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
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| CDS-3UTR GCA 90 bp | CGCAGACTTTGGCCTGGCTCCCCTGCCTCAGTCTGCAAGGCTACTTGGTACCTCGCTGGCATCCGGGTCTaGTCCACAAGGGGCCAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: RRLWPGSPASVCKATWYLAGIRV*STRGQV Trigger: AACCTGGCCCCTTGTGGAGCAGACCCGGATGCCAGC...GAGGTACCAAGTAGCCTTGCAGACTGAGGCAGGGGAGCCAGGCCAAAGTCTGCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054598.12 ENSMUST00000114210.9 |
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| CDS-3UTR CCA 90 bp | CCAGTTGTGGCGGGAAGGAGTGGGTCAAGCTGGCACCTGGCCCTAAACTACAGGACAGGATCGCAGTGCTaGCCGGCTTCTCCAGTGGGG | + |
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Preference number: 4 (lower is better) Translates to: PVVAGRSGSSWHLALNYRTGSQC*PASPVG Trigger: CCCCACTGGAGAAGCCGGCCAGCACTGCGATCCTGT...CCTGTAGTTTAGGGCCAGGTGCCAGCTTGACCCACTCCTTCCCGCCACAACTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
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| CDS-3UTR CCA 90 bp | TTGGCCTGGCTCCCCTGCCTCAGTCTGCAAGGCTACTTGGTACCTCCTCACGCTACAGGATCGCAGTGCTaGCCGGCTTCTCCAGTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: LAWLPCLSLQGYLVPPHATGSQC*PASPVG Trigger: CCCCACTGGAGAAGCCGGCCAGCACTGCGATCCTGT...AGCGTGAGGAGGTACCAAGTAGCCTTGCAGACTGAGGCAGGGGAGCCAGGCCAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
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| CDS-3UTR CCA 90 bp | GCATCCTTGCTATACAAGGGACCATGCCTGCTGGATGCTCCTCAGGGCCTGGCCACAGGATCGCAGTGCTaGCCGGCTTCTCCAGTGGGG | + |
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Preference number: 4 (lower is better) Translates to: ASLLYKGPCLLDAPQGLATGSQC*PASPVG Trigger: CCCCACTGGAGAAGCCGGCCAGCACTGCGATCCTGT...GGCCAGGCCCTGAGGAGCATCCAGCAGGCATGGTCCCTTGTATAGCAAGGATGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
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| CDS-3UTR CCA 90 bp | CCCAGTTGTGGCGGGAAGGAGTGGGTCAAGCTGGCACCTGGCCCTAAACTACAGACAGGATCGCAGTGCTaGCCGGCTTCTCCAGTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: PSCGGKEWVKLAPGPKLQTGSQC*PASPVG Trigger: CCCCACTGGAGAAGCCGGCCAGCACTGCGATCCTGT...CTGTAGTTTAGGGCCAGGTGCCAGCTTGACCCACTCCTTCCCGCCACAACTGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
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| CDS-3UTR CCA 90 bp | AAGGTGCTGGGCTGGCTGACTGCTCTGTCCCTATCTCCTAGGATAGCTGGCTGCCTGAGCCGGCAGAGCTaGGGCTGGAGGTCCTGCACT | + |
|
Preference number: 4 (lower is better) Translates to: KVLGWLTALSLSPRIAGCLSRQS*GWRSCT Trigger: AGTGCAGGACCTCCAGCCCCAGCTCTGCCGGCTCAG...GCAGCCAGCTATCCTAGGAGATAGGGACAGAGCAGTCAGCCAGCCCAGCACCTT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
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| CDS-3UTR CCA 90 bp | TCGCAGACTTTGGCCTGGCTCCCCTGCCTCAGTCTGCAAGGCTACTTGGTACCTCTGAGCCGGCAGAGCTaGGGCTGGAGGTCCTGCACT | + |
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Preference number: 4 (lower is better) Translates to: SQTLAWLPCLSLQGYLVPLSRQS*GWRSCT Trigger: AGTGCAGGACCTCCAGCCCCAGCTCTGCCGGCTCAG...AGGTACCAAGTAGCCTTGCAGACTGAGGCAGGGGAGCCAGGCCAAAGTCTGCGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
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| CDS-3UTR TCA 90 bp | CACACCAGGTGCCCCGGAAAGGTGCTGGGCTGGCTGACTGCTCTGTCCCTATCTGGGCCTGGCCATTCTTaGTTTCTAAGCCACAGCCCC | + |
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Preference number: 4 (lower is better) Translates to: HTRCPGKVLGWLTALSLSGPGHS*FLSHSP Trigger: GGGGCTGTGGCTTAGAAATCAAGAATGGCCAGGCCC...AGATAGGGACAGAGCAGTCAGCCAGCCCAGCACCTTTCCGGGGCACCTGGTGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
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| CDS-3UTR TCA 90 bp | CGCAGACTTTGGCCTGGCTCCCCTGCCTCAGTCTGCAAGGCTACTTGGTACCTCCATCTCCTCGCCCTCTaGGAACATCTGGCCGCACCT | + |
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Preference number: 4 (lower is better) Translates to: RRLWPGSPASVCKATWYLHLLAL*EHLAAP Trigger: AGGTGCGGCCAGATGTTCTCAGAGGGCGAGGAGATG...GAGGTACCAAGTAGCCTTGCAGACTGAGGCAGGGGAGCCAGGCCAAAGTCTGCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
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| CDS-3UTR TCA 90 bp | AAGGTGCTGGGCTGGCTGACTGCTCTGTCCCTATCTCCTAGGATAGCTGGCTGCTGTAGTGTCCGAGGCTaGCTGAGCCGGCAGAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: KVLGWLTALSLSPRIAGCCSVRG*LSRQSW Trigger: CCAGCTCTGCCGGCTCAGTCAGCCTCGGACACTACA...GCAGCCAGCTATCCTAGGAGATAGGGACAGAGCAGTCAGCCAGCCCAGCACCTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
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| CDS-3UTR GCA 90 bp | TTGGCCTGGCTCCCCTGCCTCAGTCTGCAAGGCTACTTGGTACCTCCTCACGCTGGCTGCCTGTCGACATaGCGGATGCCAGATGGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: LAWLPCLSLQGYLVPPHAGCLST*RMPDGG Trigger: TCCTCCATCTGGCATCCGGCATGTCGACAGGCAGCC...AGCGTGAGGAGGTACCAAGTAGCCTTGCAGACTGAGGCAGGGGAGCCAGGCCAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
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| CDS-3UTR GCA 90 bp | TTTGGCCTGGCTCCCCTGCCTCAGTCTGCAAGGCTACTTGGTACCTCCTCACGCGGCTGCCTGTCGACATaGCGGATGCCAGATGGAGGA | + |
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Preference number: 4 (lower is better) Translates to: FGLAPLPQSARLLGTSSRGCLST*RMPDGG Trigger: TCCTCCATCTGGCATCCGGCATGTCGACAGGCAGCC...GCGTGAGGAGGTACCAAGTAGCCTTGCAGACTGAGGCAGGGGAGCCAGGCCAAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
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| CDS-3UTR CCA 90 bp | GACTTTGGCCTGGCTCCCCTGCCTCAGTCTGCAAGGCTACTTGGTACCTCCTCAACAGGATCGCAGTGCTaGCCGGCTTCTCCAGTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: DFGLAPLPQSARLLGTSSTGSQC*PASPVG Trigger: CCCCACTGGAGAAGCCGGCCAGCACTGCGATCCTGT...TGAGGAGGTACCAAGTAGCCTTGCAGACTGAGGCAGGGGAGCCAGGCCAAAGTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
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| CDS-3UTR CCA 90 bp | GCCCCAGTGCCTAGCACAGGTGTGGGCACACCAGGTGCCCCGGAAAGGTGCTGGATCCTTCCTGGGTCCTaGAAGAGTGTCAGGTTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: APVPSTGVGTPGAPERCWILPGS*KSVRFG Trigger: TCCAAACCTGACACTCTTCCAGGACCCAGGAAGGAT...CCAGCACCTTTCCGGGGCACCTGGTGTGCCCACACCTGTGCTAGGCACTGGGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054598.12 |
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| CDS-3UTR CCA 90 bp | ACGCTCCGAGAAGTCTCACACTTACCATTCCTGCTGTGTCAGAGTCTGCCCCTGCTCGCGTGCCCCAGCTaGCATCCGGGTCTGCTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: TLREVSHLPFLLCQSLPLLACPS*HPGLLH Trigger: GTGGAGCAGACCCGGATGCCAGCTGGGGCACGCGAG...CAGGGGCAGACTCTGACACAGCAGGAATGGTAAGTGTGAGACTTCTCGGAGCGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054598.12 ENSMUST00000114210.9 |
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| CDS-3UTR TCA 90 bp | CCTCGCAGACTTTGGCCTGGCTCCCCTGCCTCAGTCTGCAAGGCTACTTGGTACTACACTCCTTCCCGTTaGAGGTCACACGGTCCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: PRRLWPGSPASVCKATWYYTPSR*RSHGPQ Trigger: CTGGGGACCGTGTGACCTTCAACGGGAAGGAGTGTA...GTACCAAGTAGCCTTGCAGACTGAGGCAGGGGAGCCAGGCCAAAGTCTGCGAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
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| CDS-3UTR TCA 90 bp | TTTGGCCTGGCTCCCCTGCCTCAGTCTGCAAGGCTACTTGGTACCTCCTCACGCGGGCCTGGCCATTCTTaGTTTCTAAGCCACAGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: FGLAPLPQSARLLGTSSRGPGHS*FLSHSP Trigger: GGGGCTGTGGCTTAGAAATCAAGAATGGCCAGGCCC...GCGTGAGGAGGTACCAAGTAGCCTTGCAGACTGAGGCAGGGGAGCCAGGCCAAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
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| CDS-3UTR TCA 90 bp | AGACTTTGGCCTGGCTCCCCTGCCTCAGTCTGCAAGGCTACTTGGTACCTCCTCCATCTCCTCGCCCTCTaGGAACATCTGGCCGCACCT | + |
|
Preference number: 4 (lower is better) Translates to: RLWPGSPASVCKATWYLLHLLAL*EHLAAP Trigger: AGGTGCGGCCAGATGTTCTCAGAGGGCGAGGAGATG...GAGGAGGTACCAAGTAGCCTTGCAGACTGAGGCAGGGGAGCCAGGCCAAAGTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
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| CDS-3UTR TCA 90 bp | TGGTACCTCCTCACGCTCCGAGAAGTCTCACACTTACCATTCCTGCTGTGTCAGGTGTCCGAGGCTGACTaGGCCGGCAGAGCTGGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: WYLLTLREVSHLPFLLCQVSEAD*AGRAGA Trigger: AGCCCCAGCTCTGCCGGCTCAGTCAGCCTCGGACAC...CTGACACAGCAGGAATGGTAAGTGTGAGACTTCTCGGAGCGTGAGGAGGTACCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
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| CDS-3UTR TCA 90 bp | CTGTGTCAGAGTCTGCCCCTGACAAGTCTTTCACTCACGTCCCAGACACTCTGTGTGTCCGAGGCTGACTaGGCCGGCAGAGCTGGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: LCQSLPLTSLSLTSQTLCVSEAD*AGRAGA Trigger: AGCCCCAGCTCTGCCGGCTCAGTCAGCCTCGGACAC...ACAGAGTGTCTGGGACGTGAGTGAAAGACTTGTCAGGGGCAGACTCTGACACAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
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| CDS-3UTR TCA 90 bp | ACTGCTCTGTCCCTATCTCCTAGGATAGCTGGCTGCAACACTGCCCTGATGCCCTGTAGTGTCCGAGGCTaGCTGAGCCGGCAGAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: TALSLSPRIAGCNTALMPCSVRG*LSRQSW Trigger: CCAGCTCTGCCGGCTCAGTCAGCCTCGGACACTACA...GGGCATCAGGGCAGTGTTGCAGCCAGCTATCCTAGGAGATAGGGACAGAGCAGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
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| CDS-3UTR TCA 90 bp | AGACTTTGGCCTGGCTCCCCTGCCTCAGTCTGCAAGGCTACTTGGTACCTCCTCCTGAGGGACAGCGACTaGCTGTCCAGGTCTGGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: RLWPGSPASVCKATWYLLLRDSD*LSRSGE Trigger: CTCTCCAGACCTGGACAGTCAGTCGCTGTCCCTCAG...GAGGAGGTACCAAGTAGCCTTGCAGACTGAGGCAGGGGAGCCAGGCCAAAGTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
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| CDS-3UTR GCA 90 bp | GAGGAGGGGACAGCTAGAGTCACCCAGGACCACAGTGTCCACCCATTCTGCAGCTACACAGGATCGCAGTaGTGGCCGGCTTCTCCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: EEGTARVTQDHSVHPFCSYTGSQ*WPASPV Trigger: CACTGGAGAAGCCGGCCAGCACTGCGATCCTGTGTA...GCTGCAGAATGGGTGGACACTGTGGTCCTGGGTGACTCTAGCTGTCCCCTCCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054598.12 ENSMUST00000114206.9 |
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| CDS-3UTR GCA 90 bp | CACTGCCCTGATGCCCAGTTGTGGCGGGAAGGAGTGGGTCAAGCTGGCACCTGGGCAGCACCTCTCCCTTaGACACATTCCCACAGGTAT | + |
|
Preference number: 4 (lower is better) Translates to: HCPDAQLWREGVGQAGTWAAPLP*THSHRY Trigger: ATACCTGTGGGAATGTGTGCAAGGGAGAGGTGCTGC...CCAGGTGCCAGCTTGACCCACTCCTTCCCGCCACAACTGGGCATCAGGGCAGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
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| CDS-3UTR GCA 90 bp | AACACTGCCCTGATGCCCAGTTGTGGCGGGAAGGAGTGGGTCAAGCTGGCACCTCAGATGGAGGAGCCTTaGAGGTACATCTCCTCGCCC | + |
|
Preference number: 4 (lower is better) Translates to: NTALMPSCGGKEWVKLAPQMEEP*RYISSP Trigger: GGGCGAGGAGATGTACCTGCAAGGCTCCTCCATCTG...AGGTGCCAGCTTGACCCACTCCTTCCCGCCACAACTGGGCATCAGGGCAGTGTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
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| CDS-3UTR GCA 90 bp | CGCAGACTTTGGCCTGGCTCCCCTGCCTCAGTCTGCAAGGCTACTTGGTACCTCTGTCGACATGCCGGATaGCAGATGGAGGAGCCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: RRLWPGSPASVCKATWYLCRHAG*QMEEPC Trigger: GCAAGGCTCCTCCATCTGGCATCCGGCATGTCGACA...GAGGTACCAAGTAGCCTTGCAGACTGAGGCAGGGGAGCCAGGCCAAAGTCTGCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
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| CDS-3UTR GCA 90 bp | TGTGGCGGGAAGGAGTGGGTCAAGCTGGCACCTGGCCCTAAACTACAGGCAAGAGGCTGCCTGTCGACATaGCGGATGCCAGATGGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: CGGKEWVKLAPGPKLQARGCLST*RMPDGG Trigger: TCCTCCATCTGGCATCCGGCATGTCGACAGGCAGCC...TCTTGCCTGTAGTTTAGGGCCAGGTGCCAGCTTGACCCACTCCTTCCCGCCACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
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| CDS-3UTR GCA 90 bp | GCATCCTTGCTATACAAGGGACCATGCCTGCTGGATGCTCCTCAGGGCCTGGCCTGGGGCTGGAGGTCCTaGACTGCTTGTAGGACCGAT | + |
|
Preference number: 4 (lower is better) Translates to: ASLLYKGPCLLDAPQGLAWGWRS*TACRTD Trigger: ATCGGTCCTACAAGCAGTGCAGGACCTCCAGCCCCA...GGCCAGGCCCTGAGGAGCATCCAGCAGGCATGGTCCCTTGTATAGCAAGGATGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
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| CDS-3UTR GCA 90 bp | TTTGGCCTGGCTCCCCTGCCTCAGTCTGCAAGGCTACTTGGTACCTCCTCACGCTGGGGCTGGAGGTCCTaGACTGCTTGTAGGACCGAT | + |
|
Preference number: 4 (lower is better) Translates to: FGLAPLPQSARLLGTSSRWGWRS*TACRTD Trigger: ATCGGTCCTACAAGCAGTGCAGGACCTCCAGCCCCA...GCGTGAGGAGGTACCAAGTAGCCTTGCAGACTGAGGCAGGGGAGCCAGGCCAAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
||
| CDS-3UTR GCA 90 bp | GACTTTGGCCTGGCTCCCCTGCCTCAGTCTGCAAGGCTACTTGGTACCTCCTCACTGAGAGACTCGGGGTaGTACGGCCACTTTCGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: DFGLAPLPQSARLLGTSSLRDSG*YGHFRC Trigger: GCAGCGAAAGTGGCCGTAGCACCCCGAGTCTCTCAG...TGAGGAGGTACCAAGTAGCCTTGCAGACTGAGGCAGGGGAGCCAGGCCAAAGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
||
| CDS-3UTR GCA 90 bp | AGACTTTGGCCTGGCTCCCCTGCCTCAGTCTGCAAGGCTACTTGGTACCTCCTCCTGAGAGACTCGGGGTaGTACGGCCACTTTCGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: RLWPGSPASVCKATWYLLLRDSG*YGHFRC Trigger: GCAGCGAAAGTGGCCGTAGCACCCCGAGTCTCTCAG...GAGGAGGTACCAAGTAGCCTTGCAGACTGAGGCAGGGGAGCCAGGCCAAAGTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
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| CDS-3UTR GCA 90 bp | CGCAGACTTTGGCCTGGCTCCCCTGCCTCAGTCTGCAAGGCTACTTGGTACCTCTCTTATACTCTCGCGTaGCCCAGCTGGCATCCGGGT | + |
|
Preference number: 4 (lower is better) Translates to: RRLWPGSPASVCKATWYLSYTLA*PSWHPG Trigger: ACCCGGATGCCAGCTGGGGCACGCGAGAGTATAAGA...GAGGTACCAAGTAGCCTTGCAGACTGAGGCAGGGGAGCCAGGCCAAAGTCTGCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054598.12 |
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| CDS-3UTR GCA 90 bp | AAGGTGCTGGGCTGGCTGACTGCTCTGTCCCTATCTCCTAGGATAGCTGGCTGCCCGGGCAGGGCTGGCTaGAAACAGAGCTGTGCATCT | + |
|
Preference number: 4 (lower is better) Translates to: KVLGWLTALSLSPRIAGCPGRAG*KQSCAS Trigger: AGATGCACAGCTCTGTTTGCAGCCAGCCCTGCCCGG...GCAGCCAGCTATCCTAGGAGATAGGGACAGAGCAGTCAGCCAGCCCAGCACCTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101280.10 |
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| CDS-3UTR CCA 90 bp | CCAGTTGTGGCGGGAAGGAGTGGGTCAAGCTGGCACCTGGCCCTAAACTACAGGCCCTCTGAGAACATCTaGCCGCACCTGACGCATAGC | + |
|
Preference number: 4 (lower is better) Translates to: PVVAGRSGSSWHLALNYRPSENI*PHLTHS Trigger: GCTATGCGTCAGGTGCGGCCAGATGTTCTCAGAGGG...CCTGTAGTTTAGGGCCAGGTGCCAGCTTGACCCACTCCTTCCCGCCACAACTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
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| CDS-3UTR CCA 90 bp | TTGGCCTGGCTCCCCTGCCTCAGTCTGCAAGGCTACTTGGTACCTCCTCACGCTCCCTCTGAGAACATCTaGCCGCACCTGACGCATAGC | + |
|
Preference number: 4 (lower is better) Translates to: LAWLPCLSLQGYLVPPHAPSENI*PHLTHS Trigger: GCTATGCGTCAGGTGCGGCCAGATGTTCTCAGAGGG...AGCGTGAGGAGGTACCAAGTAGCCTTGCAGACTGAGGCAGGGGAGCCAGGCCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
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| CDS-3UTR CCA 90 bp | TTGGCCTGGCTCCCCTGCCTCAGTCTGCAAGGCTACTTGGTACCTCCTCACGCTCTTTGGAGAGGTTCCTaGTCAGTCCCGCTGCTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: LAWLPCLSLQGYLVPPHALWRGS*SVPLLR Trigger: CCTCAGCAGCGGGACTGACCAGGAACCTCTCCAAAG...AGCGTGAGGAGGTACCAAGTAGCCTTGCAGACTGAGGCAGGGGAGCCAGGCCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
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| CDS-3UTR CCA 90 bp | CCAGTTGTGGCGGGAAGGAGTGGGTCAAGCTGGCACCTGGCCCTAAACTACAGGCTTTGGAGAGGTTCCTaGTCAGTCCCGCTGCTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: PVVAGRSGSSWHLALNYRLWRGS*SVPLLR Trigger: CCTCAGCAGCGGGACTGACCAGGAACCTCTCCAAAG...CCTGTAGTTTAGGGCCAGGTGCCAGCTTGACCCACTCCTTCCCGCCACAACTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
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| CDS-3UTR CCA 90 bp | ACTGCTCTGTCCCTATCTCCTAGGATAGCTGGCTGCAACACTGCCCTGATGCCCCACAAGGGGCCAGGTTaGCATTCCGGAGGTCCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: TALSLSPRIAGCNTALMPHKGPG*HSGGPG Trigger: GCCTGGACCTCCGGAATGCCAACCTGGCCCCTTGTG...GGGCATCAGGGCAGTGTTGCAGCCAGCTATCCTAGGAGATAGGGACAGAGCAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054598.12 |
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| 3UTR CAA 72 bp | ACTGTAGAAAACCTCCGTCCCACTGCCTCGCAGACTTaGGCCTGGCTCCCCTGCCTCAGTCTGCAAGGCTAC | + |
|
Preference number: 4 (lower is better) Translates to: TVENLRPTASQT*AWLPCLSLQGY Trigger: GTAGCCTTGCAGACTGAGGCAGGGGAGCCAGGCCAAAGTCTGCGAGGCAGTGGGACGGAGGTTTTCTACAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
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| CDS-3UTR TCA 90 bp | AGACTTTGGCCTGGCTCCCCTGCCTCAGTCTGCAAGGCTACTTGGTACCTCCTCGGGCCTGGCCATTCTTaGTTTCTAAGCCACAGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: RLWPGSPASVCKATWYLLGPGHS*FLSHSP Trigger: GGGGCTGTGGCTTAGAAATCAAGAATGGCCAGGCCC...GAGGAGGTACCAAGTAGCCTTGCAGACTGAGGCAGGGGAGCCAGGCCAAAGTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
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| CDS-3UTR TCA 90 bp | AAGGTGCTGGGCTGGCTGACTGCTCTGTCCCTATCTCCTAGGATAGCTGGCTGCACATCTGGCCGCACCTaGCGCATAGCGCACATGAAG | + |
|
Preference number: 4 (lower is better) Translates to: KVLGWLTALSLSPRIAGCTSGRT*RIAHMK Trigger: CTTCATGTGCGCTATGCGTCAGGTGCGGCCAGATGT...GCAGCCAGCTATCCTAGGAGATAGGGACAGAGCAGTCAGCCAGCCCAGCACCTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
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| CDS-3UTR TCA 90 bp | TGTGGCGGGAAGGAGTGGGTCAAGCTGGCACCTGGCCCTAAACTACAGGCAAGAACATCTGGCCGCACCTaGCGCATAGCGCACATGAAG | + |
|
Preference number: 4 (lower is better) Translates to: CGGKEWVKLAPGPKLQARTSGRT*RIAHMK Trigger: CTTCATGTGCGCTATGCGTCAGGTGCGGCCAGATGT...TCTTGCCTGTAGTTTAGGGCCAGGTGCCAGCTTGACCCACTCCTTCCCGCCACA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
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| CDS-3UTR TCA 90 bp | ACTGCTCTGTCCCTATCTCCTAGGATAGCTGGCTGCAACACTGCCCTGATGCCCCATCTCCTCGCCCTCTaGGAACATCTGGCCGCACCT | + |
|
Preference number: 4 (lower is better) Translates to: TALSLSPRIAGCNTALMPHLLAL*EHLAAP Trigger: AGGTGCGGCCAGATGTTCTCAGAGGGCGAGGAGATG...GGGCATCAGGGCAGTGTTGCAGCCAGCTATCCTAGGAGATAGGGACAGAGCAGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
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| CDS-3UTR TCA 90 bp | TTTGGCCTGGCTCCCCTGCCTCAGTCTGCAAGGCTACTTGGTACCTCCTCACGCTGTCTGCATCCCCCTTaGGAAGCAGCCAGGTTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: FGLAPLPQSARLLGTSSRCLHPP*EAARLS Trigger: AGACAACCTGGCTGCTTCTCAAGGGGGATGCAGACA...GCGTGAGGAGGTACCAAGTAGCCTTGCAGACTGAGGCAGGGGAGCCAGGCCAAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
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| CDS-3UTR TCA 90 bp | CCCAGTTGTGGCGGGAAGGAGTGGGTCAAGCTGGCACCTGGCCCTAAACTACAGTGTCTGCATCCCCCTTaGGAAGCAGCCAGGTTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: PSCGGKEWVKLAPGPKLQCLHPP*EAARLS Trigger: AGACAACCTGGCTGCTTCTCAAGGGGGATGCAGACA...CTGTAGTTTAGGGCCAGGTGCCAGCTTGACCCACTCCTTCCCGCCACAACTGGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
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| CDS-3UTR TCA 90 bp | ACTGCTCTGTCCCTATCTCCTAGGATAGCTGGCTGCAACACTGCCCTGATGCCCCTGAGGGACAGCGACTaGCTGTCCAGGTCTGGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: TALSLSPRIAGCNTALMPLRDSD*LSRSGE Trigger: CTCTCCAGACCTGGACAGTCAGTCGCTGTCCCTCAG...GGGCATCAGGGCAGTGTTGCAGCCAGCTATCCTAGGAGATAGGGACAGAGCAGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
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| CDS-3UTR GCA 90 bp | TGTGGCGGGAAGGAGTGGGTCAAGCTGGCACCTGGCCCTAAACTACAGGCAAGATACACAGGATCGCAGTaGTGGCCGGCTTCTCCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: CGGKEWVKLAPGPKLQARYTGSQ*WPASPV Trigger: CACTGGAGAAGCCGGCCAGCACTGCGATCCTGTGTA...TCTTGCCTGTAGTTTAGGGCCAGGTGCCAGCTTGACCCACTCCTTCCCGCCACA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
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| CDS-3UTR GCA 90 bp | AGACTTTGGCCTGGCTCCCCTGCCTCAGTCTGCAAGGCTACTTGGTACCTCCTCTACACAGGATCGCAGTaGTGGCCGGCTTCTCCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: RLWPGSPASVCKATWYLLYTGSQ*WPASPV Trigger: CACTGGAGAAGCCGGCCAGCACTGCGATCCTGTGTA...GAGGAGGTACCAAGTAGCCTTGCAGACTGAGGCAGGGGAGCCAGGCCAAAGTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
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| CDS-3UTR GCA 90 bp | GCCCCAGTGCCTAGCACAGGTGTGGGCACACCAGGTGCCCCGGAAAGGTGCTGGCTTGCTGATGTACTCTaGATTGAGGAGTTTCCCACA | + |
|
Preference number: 4 (lower is better) Translates to: APVPSTGVGTPGAPERCWLADVL*IEEFPT Trigger: TGTGGGAAACTCCTCAATGCAGAGTACATCAGCAAG...CCAGCACCTTTCCGGGGCACCTGGTGTGCCCACACCTGTGCTAGGCACTGGGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
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| CDS-3UTR GCA 90 bp | AGACTTTGGCCTGGCTCCCCTGCCTCAGTCTGCAAGGCTACTTGGTACCTCCTCTGTCGACATGCCGGATaGCAGATGGAGGAGCCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: RLWPGSPASVCKATWYLLCRHAG*QMEEPC Trigger: GCAAGGCTCCTCCATCTGGCATCCGGCATGTCGACA...GAGGAGGTACCAAGTAGCCTTGCAGACTGAGGCAGGGGAGCCAGGCCAAAGTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
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| CDS-3UTR GCA 90 bp | TGTGGCGGGAAGGAGTGGGTCAAGCTGGCACCTGGCCCTAAACTACAGGCAAGATGGGGCTGGAGGTCCTaGACTGCTTGTAGGACCGAT | + |
|
Preference number: 4 (lower is better) Translates to: CGGKEWVKLAPGPKLQARWGWRS*TACRTD Trigger: ATCGGTCCTACAAGCAGTGCAGGACCTCCAGCCCCA...TCTTGCCTGTAGTTTAGGGCCAGGTGCCAGCTTGACCCACTCCTTCCCGCCACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
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| CDS-3UTR GCA 90 bp | ACTGCTCTGTCCCTATCTCCTAGGATAGCTGGCTGCAACACTGCCCTGATGCCCCTGAGAGACTCGGGGTaGTACGGCCACTTTCGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: TALSLSPRIAGCNTALMPLRDSG*YGHFRC Trigger: GCAGCGAAAGTGGCCGTAGCACCCCGAGTCTCTCAG...GGGCATCAGGGCAGTGTTGCAGCCAGCTATCCTAGGAGATAGGGACAGAGCAGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
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| CDS-3UTR GCA 90 bp | CCTGCTGTGTCAGAGTCTGCCCCTGACAAGTCTTTCACTCACGTCCCAGACACTGCTGGCATCCGGGTCTaGTCCACAAGGGGCCAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: PAVSESAPDKSFTHVPDTAGIRV*STRGQV Trigger: AACCTGGCCCCTTGTGGAGCAGACCCGGATGCCAGC...AGTGTCTGGGACGTGAGTGAAAGACTTGTCAGGGGCAGACTCTGACACAGCAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054598.12 ENSMUST00000114210.9 |
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| CDS-3UTR CCA 90 bp | CGCAGACTTTGGCCTGGCTCCCCTGCCTCAGTCTGCAAGGCTACTTGGTACCTCGGTGGGGAACACTTCTaGCACATACACTCCTTCCCG | + |
|
Preference number: 4 (lower is better) Translates to: RRLWPGSPASVCKATWYLGGEHF*HIHSFP Trigger: CGGGAAGGAGTGTATGTGCCAGAAGTGTTCCCCACC...GAGGTACCAAGTAGCCTTGCAGACTGAGGCAGGGGAGCCAGGCCAAAGTCTGCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
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| CDS-3UTR CCA 90 bp | AACACTGCCCTGATGCCCAGTTGTGGCGGGAAGGAGTGGGTCAAGCTGGCACCTGCCCAGCAATGTGGGTaGGGAACACTTCTGGCACAT | + |
|
Preference number: 4 (lower is better) Translates to: NTALMPSCGGKEWVKLAPAQQCG*GTLLAH Trigger: ATGTGCCAGAAGTGTTCCCCACCCACATTGCTGGGC...AGGTGCCAGCTTGACCCACTCCTTCCCGCCACAACTGGGCATCAGGGCAGTGTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
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| CDS-3UTR CCA 90 bp | GCATCCTTGCTATACAAGGGACCATGCCTGCTGGATGCTCCTCAGGGCCTGGCCTGTTGCCCAGCAATGTaGGTGGGGAACACTTCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: ASLLYKGPCLLDAPQGLACCPAM*VGNTSG Trigger: GCCAGAAGTGTTCCCCACCCACATTGCTGGGCAACA...GGCCAGGCCCTGAGGAGCATCCAGCAGGCATGGTCCCTTGTATAGCAAGGATGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
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| CDS-3UTR CCA 90 bp | TTTGGCCTGGCTCCCCTGCCTCAGTCTGCAAGGCTACTTGGTACCTCCTCACGCTGTTGCCCAGCAATGTaGGTGGGGAACACTTCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: FGLAPLPQSARLLGTSSRCCPAM*VGNTSG Trigger: GCCAGAAGTGTTCCCCACCCACATTGCTGGGCAACA...GCGTGAGGAGGTACCAAGTAGCCTTGCAGACTGAGGCAGGGGAGCCAGGCCAAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
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| CDS-3UTR CCA 90 bp | AACACTGCCCTGATGCCCAGTTGTGGCGGGAAGGAGTGGGTCAAGCTGGCACCTTCTTGTCTTCAGTCCTaGCTGCCTGTCGACATGCCG | + |
|
Preference number: 4 (lower is better) Translates to: NTALMPSCGGKEWVKLAPSCLQS*LPVDMP Trigger: CGGCATGTCGACAGGCAGCCAGGACTGAAGACAAGA...AGGTGCCAGCTTGACCCACTCCTTCCCGCCACAACTGGGCATCAGGGCAGTGTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
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| CDS-3UTR CCA 90 bp | GCATCCTTGCTATACAAGGGACCATGCCTGCTGGATGCTCCTCAGGGCCTGGCCTCTTGTCTTCAGTCCTaGCTGCCTGTCGACATGCCG | + |
|
Preference number: 4 (lower is better) Translates to: ASLLYKGPCLLDAPQGLASCLQS*LPVDMP Trigger: CGGCATGTCGACAGGCAGCCAGGACTGAAGACAAGA...GGCCAGGCCCTGAGGAGCATCCAGCAGGCATGGTCCCTTGTATAGCAAGGATGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
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| CDS-3UTR CCA 90 bp | ACGCTCCGAGAAGTCTCACACTTACCATTCCTGCTGTGTCAGAGTCTGCCCCTGCGGCAGAGCTGGGGCTaGAGGTCCTGCACTGCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: TLREVSHLPFLLCQSLPLRQSWG*RSCTAC Trigger: ACAAGCAGTGCAGGACCTCCAGCCCCAGCTCTGCCG...CAGGGGCAGACTCTGACACAGCAGGAATGGTAAGTGTGAGACTTCTCGGAGCGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
||
| CDS-3UTR CCA 90 bp | CTGCCTGCCCTACTGACACAGAGAAGCAGAGCAAGGTGCAGGAGGGGATTTTCACGGCAGAGCTGGGGCTaGAGGTCCTGCACTGCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: LPALLTQRSRARCRRGFSRQSWG*RSCTAC Trigger: ACAAGCAGTGCAGGACCTCCAGCCCCAGCTCTGCCG...TGAAAATCCCCTCCTGCACCTTGCTCTGCTTCTCTGTGTCAGTAGGGCAGGCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
||
| CDS-3UTR CCA 90 bp | CACTGCCCTGATGCCCAGTTGTGGCGGGAAGGAGTGGGTCAAGCTGGCACCTGGCTGACTGTCCAGGTCTaGAGAGTTAGTTCTGGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: HCPDAQLWREGVGQAGTWLTVQV*RVSSGV Trigger: GACACCAGAACTAACTCTCCAGACCTGGACAGTCAG...CCAGGTGCCAGCTTGACCCACTCCTTCCCGCCACAACTGGGCATCAGGGCAGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
||
| CDS-3UTR CCA 90 bp | TGTGGCGGGAAGGAGTGGGTCAAGCTGGCACCTGGCCCTAAACTACAGGCAAGACTTTGGAGAGGTTCCTaGTCAGTCCCGCTGCTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: CGGKEWVKLAPGPKLQARLWRGS*SVPLLR Trigger: CCTCAGCAGCGGGACTGACCAGGAACCTCTCCAAAG...TCTTGCCTGTAGTTTAGGGCCAGGTGCCAGCTTGACCCACTCCTTCCCGCCACA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
||
| CDS-3UTR TCA 90 bp | TTTGGCCTGGCTCCCCTGCCTCAGTCTGCAAGGCTACTTGGTACCTCCTCACGCCACAAGTCTTGCACTTaGAGCATCCCAGGTGCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: FGLAPLPQSARLLGTSSRHKSCT*SIPGAS Trigger: ACTGGCACCTGGGATGCTTCAAGTGCAAGACTTGTG...GCGTGAGGAGGTACCAAGTAGCCTTGCAGACTGAGGCAGGGGAGCCAGGCCAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
||
| CDS-3UTR TCA 90 bp | GCAAGAGCATCCTTGCTATACAAGGGACCATGCCTGCTGGATGCTCCTCAGGGCACATCTGGCCGCACCTaGCGCATAGCGCACATGAAG | + |
|
Preference number: 4 (lower is better) Translates to: ARASLLYKGPCLLDAPQGTSGRT*RIAHMK Trigger: CTTCATGTGCGCTATGCGTCAGGTGCGGCCAGATGT...GCCCTGAGGAGCATCCAGCAGGCATGGTCCCTTGTATAGCAAGGATGCTCTTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
||
| CDS-3UTR TCA 90 bp | GCTGTGTCAGAGTCTGCCCCTGACAAGTCTTTCACTCACGTCCCAGACACTCTGCATCTCCTCGCCCTCTaGGAACATCTGGCCGCACCT | + |
|
Preference number: 4 (lower is better) Translates to: AVSESAPDKSFTHVPDTLHLLAL*EHLAAP Trigger: AGGTGCGGCCAGATGTTCTCAGAGGGCGAGGAGATG...CAGAGTGTCTGGGACGTGAGTGAAAGACTTGTCAGGGGCAGACTCTGACACAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
||
| CDS-3UTR TCA 90 bp | GTCTCACACTTACCATTCCTGCTGTGTCAGAGTCTGCCCCTGACAAGTCTTTCAGTGTCCGAGGCTGACTaGGCCGGCAGAGCTGGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: VSHLPFLLCQSLPLTSLSVSEAD*AGRAGA Trigger: AGCCCCAGCTCTGCCGGCTCAGTCAGCCTCGGACAC...TGAAAGACTTGTCAGGGGCAGACTCTGACACAGCAGGAATGGTAAGTGTGAGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
||
| CDS-3UTR TCA 90 bp | CTCACACTTACCATTCCTGCTGTGTCAGAGTCTGCCCCTGACAAGTCTTTCACTGTGTCCGAGGCTGACTaGGCCGGCAGAGCTGGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: LTLTIPAVSESAPDKSFTVSEAD*AGRAGA Trigger: AGCCCCAGCTCTGCCGGCTCAGTCAGCCTCGGACAC...AGTGAAAGACTTGTCAGGGGCAGACTCTGACACAGCAGGAATGGTAAGTGTGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
||
| CDS-3UTR TCA 90 bp | TCGCAGACTTTGGCCTGGCTCCCCTGCCTCAGTCTGCAAGGCTACTTGGTACCTTGTCTGCATCCCCCTTaGGAAGCAGCCAGGTTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: SQTLAWLPCLSLQGYLVPCLHPP*EAARLS Trigger: AGACAACCTGGCTGCTTCTCAAGGGGGATGCAGACA...AGGTACCAAGTAGCCTTGCAGACTGAGGCAGGGGAGCCAGGCCAAAGTCTGCGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
||
| CDS-3UTR TCA 90 bp | TGTGGCGGGAAGGAGTGGGTCAAGCTGGCACCTGGCCCTAAACTACAGGCAAGATGTCTGCATCCCCCTTaGGAAGCAGCCAGGTTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: CGGKEWVKLAPGPKLQARCLHPP*EAARLS Trigger: AGACAACCTGGCTGCTTCTCAAGGGGGATGCAGACA...TCTTGCCTGTAGTTTAGGGCCAGGTGCCAGCTTGACCCACTCCTTCCCGCCACA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
||
| CDS-3UTR TCA 90 bp | CCTGCTGTGTCAGAGTCTGCCCCTGACAAGTCTTTCACTCACGTCCCAGACACTCTGAGGGACAGCGACTaGCTGTCCAGGTCTGGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: PAVSESAPDKSFTHVPDTLRDSD*LSRSGE Trigger: CTCTCCAGACCTGGACAGTCAGTCGCTGTCCCTCAG...AGTGTCTGGGACGTGAGTGAAAGACTTGTCAGGGGCAGACTCTGACACAGCAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
||
| CDS-3UTR TCA 90 bp | GCTGTGTCAGAGTCTGCCCCTGACAAGTCTTTCACTCACGTCCCAGACACTCTGCTGAGGGACAGCGACTaGCTGTCCAGGTCTGGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: AVSESAPDKSFTHVPDTLLRDSD*LSRSGE Trigger: CTCTCCAGACCTGGACAGTCAGTCGCTGTCCCTCAG...CAGAGTGTCTGGGACGTGAGTGAAAGACTTGTCAGGGGCAGACTCTGACACAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
||
| CDS-3UTR TCA 90 bp | ACGCTCCGAGAAGTCTCACACTTACCATTCCTGCTGTGTCAGAGTCTGCCCCTGCTGAGGGACAGCGACTaGCTGTCCAGGTCTGGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: TLREVSHLPFLLCQSLPLLRDSD*LSRSGE Trigger: CTCTCCAGACCTGGACAGTCAGTCGCTGTCCCTCAG...CAGGGGCAGACTCTGACACAGCAGGAATGGTAAGTGTGAGACTTCTCGGAGCGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
||
| CDS-3UTR GCA 90 bp | TTTGGCCTGGCTCCCCTGCCTCAGTCTGCAAGGCTACTTGGTACCTCCTCACGCTGGAAGTACTTGTTCTaGACACGCAGCACCTCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: FGLAPLPQSARLLGTSSRWKYLF*TRSTSP Trigger: GGGAGAGGTGCTGCGTGTGCAGAACAAGTACTTCCA...GCGTGAGGAGGTACCAAGTAGCCTTGCAGACTGAGGCAGGGGAGCCAGGCCAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
||
| CDS-3UTR GCA 90 bp | CCCAGTTGTGGCGGGAAGGAGTGGGTCAAGCTGGCACCTGGCCCTAAACTACAGTGGAAGTACTTGTTCTaGACACGCAGCACCTCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: PSCGGKEWVKLAPGPKLQWKYLF*TRSTSP Trigger: GGGAGAGGTGCTGCGTGTGCAGAACAAGTACTTCCA...CTGTAGTTTAGGGCCAGGTGCCAGCTTGACCCACTCCTTCCCGCCACAACTGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
||
| CDS-3UTR GCA 90 bp | CGCAGACTTTGGCCTGGCTCCCCTGCCTCAGTCTGCAAGGCTACTTGGTACCTCTTGAAGCATCCCAGGTaGCAGTGCTTGTCCAAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: RRLWPGSPASVCKATWYLLKHPR*QCLSKA Trigger: GGCTTTGGACAAGCACTGGCACCTGGGATGCTTCAA...GAGGTACCAAGTAGCCTTGCAGACTGAGGCAGGGGAGCCAGGCCAAAGTCTGCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
||
| CDS-3UTR GCA 90 bp | CTGCCTGCCCTACTGACACAGAGAAGCAGAGCAAGGTGCAGGAGGGGATTTTCAGGCTGCCTGTCGACATaGCGGATGCCAGATGGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: LPALLTQRSRARCRRGFSGCLST*RMPDGG Trigger: TCCTCCATCTGGCATCCGGCATGTCGACAGGCAGCC...TGAAAATCCCCTCCTGCACCTTGCTCTGCTTCTCTGTGTCAGTAGGGCAGGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
||
| CDS-3UTR GCA 90 bp | CCCAGTTGTGGCGGGAAGGAGTGGGTCAAGCTGGCACCTGGCCCTAAACTACAGTGTCCTGGTCAAAGCTaGTGTCCTCCACGTCCAATC | + |
|
Preference number: 4 (lower is better) Translates to: PSCGGKEWVKLAPGPKLQCPGQS*CPPRPI Trigger: GATTGGACGTGGAGGACAGCAGCTTTGACCAGGACA...CTGTAGTTTAGGGCCAGGTGCCAGCTTGACCCACTCCTTCCCGCCACAACTGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
||
| CDS-3UTR GCA 90 bp | TTGGCCTGGCTCCCCTGCCTCAGTCTGCAAGGCTACTTGGTACCTCCTCACGCTTGTCCTGGTCAAAGCTaGTGTCCTCCACGTCCAATC | + |
|
Preference number: 4 (lower is better) Translates to: LAWLPCLSLQGYLVPPHACPGQS*CPPRPI Trigger: GATTGGACGTGGAGGACAGCAGCTTTGACCAGGACA...AGCGTGAGGAGGTACCAAGTAGCCTTGCAGACTGAGGCAGGGGAGCCAGGCCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
||
| CDS-3UTR GCA 90 bp | CACACCAGGTGCCCCGGAAAGGTGCTGGGCTGGCTGACTGCTCTGTCCCTATCTAGGTTGTCTTCTTCCTaGTGTCCTGGTCAAAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: HTRCPGKVLGWLTALSLSRLSSS*CPGQSC Trigger: GCAGCTTTGACCAGGACAGCAGGAAGAAGACAACCT...AGATAGGGACAGAGCAGTCAGCCAGCCCAGCACCTTTCCGGGGCACCTGGTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
||
| CDS-3UTR GCA 90 bp | TTTGGCCTGGCTCCCCTGCCTCAGTCTGCAAGGCTACTTGGTACCTCCTCACGCGTAGAGGCTGTCCCCTaGCATTCTTTGGAGAGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: FGLAPLPQSARLLGTSSRVEAVP*HSLERF Trigger: GAACCTCTCCAAAGAATGGCAGGGGACAGCCTCTAC...GCGTGAGGAGGTACCAAGTAGCCTTGCAGACTGAGGCAGGGGAGCCAGGCCAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
||
| CDS-3UTR GCA 90 bp | CGCAGACTTTGGCCTGGCTCCCCTGCCTCAGTCTGCAAGGCTACTTGGTACCTCGTAGAGGCTGTCCCCTaGCATTCTTTGGAGAGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: RRLWPGSPASVCKATWYLVEAVP*HSLERF Trigger: GAACCTCTCCAAAGAATGGCAGGGGACAGCCTCTAC...GAGGTACCAAGTAGCCTTGCAGACTGAGGCAGGGGAGCCAGGCCAAAGTCTGCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
||
| CDS-3UTR CCA 90 bp | GCCCCAGTGCCTAGCACAGGTGTGGGCACACCAGGTGCCCCGGAAAGGTGCTGGACAAAGCACCTGATGTaGAAGTACTTGTTCTGCACA | + |
|
Preference number: 4 (lower is better) Translates to: APVPSTGVGTPGAPERCWTKHLM*KYLFCT Trigger: TGTGCAGAACAAGTACTTCCACATCAGGTGCTTTGT...CCAGCACCTTTCCGGGGCACCTGGTGTGCCCACACCTGTGCTAGGCACTGGGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
||
| CDS-3UTR CCA 90 bp | AGACTTTGGCCTGGCTCCCCTGCCTCAGTCTGCAAGGCTACTTGGTACCTCCTCGGTGGGGAACACTTCTaGCACATACACTCCTTCCCG | + |
|
Preference number: 4 (lower is better) Translates to: RLWPGSPASVCKATWYLLGGEHF*HIHSFP Trigger: CGGGAAGGAGTGTATGTGCCAGAAGTGTTCCCCACC...GAGGAGGTACCAAGTAGCCTTGCAGACTGAGGCAGGGGAGCCAGGCCAAAGTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
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| CDS-3UTR CCA 90 bp | TGTGGCGGGAAGGAGTGGGTCAAGCTGGCACCTGGCCCTAAACTACAGGCAAGAGCCCAGCAATGTGGGTaGGGAACACTTCTGGCACAT | + |
|
Preference number: 4 (lower is better) Translates to: CGGKEWVKLAPGPKLQARAQQCG*GTLLAH Trigger: ATGTGCCAGAAGTGTTCCCCACCCACATTGCTGGGC...TCTTGCCTGTAGTTTAGGGCCAGGTGCCAGCTTGACCCACTCCTTCCCGCCACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
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| CDS-3UTR CCA 90 bp | TGTGGCGGGAAGGAGTGGGTCAAGCTGGCACCTGGCCCTAAACTACAGGCAAGAATGCCGGATGCCAGATaGAGGAGCCTTGCAGGTACA | + |
|
Preference number: 4 (lower is better) Translates to: CGGKEWVKLAPGPKLQARMPDAR*RSLAGT Trigger: TGTACCTGCAAGGCTCCTCCATCTGGCATCCGGCAT...TCTTGCCTGTAGTTTAGGGCCAGGTGCCAGCTTGACCCACTCCTTCCCGCCACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
||
| CDS-3UTR CCA 90 bp | TCGCAGACTTTGGCCTGGCTCCCCTGCCTCAGTCTGCAAGGCTACTTGGTACCTTCTTGTCTTCAGTCCTaGCTGCCTGTCGACATGCCG | + |
|
Preference number: 4 (lower is better) Translates to: SQTLAWLPCLSLQGYLVPSCLQS*LPVDMP Trigger: CGGCATGTCGACAGGCAGCCAGGACTGAAGACAAGA...AGGTACCAAGTAGCCTTGCAGACTGAGGCAGGGGAGCCAGGCCAAAGTCTGCGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
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| CDS-3UTR CCA 90 bp | ACCATTCCTGCTGTGTCAGAGTCTGCCCCTGACAAGTCTTTCACTCACGTCCCACGGCAGAGCTGGGGCTaGAGGTCCTGCACTGCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: TIPAVSESAPDKSFTHVPRQSWG*RSCTAC Trigger: ACAAGCAGTGCAGGACCTCCAGCCCCAGCTCTGCCG...TGGGACGTGAGTGAAAGACTTGTCAGGGGCAGACTCTGACACAGCAGGAATGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
||
| CDS-3UTR CCA 90 bp | TTGGCCTGGCTCCCCTGCCTCAGTCTGCAAGGCTACTTGGTACCTCCTCACGCTTCCCCTGCCATTCTTTaGAGAGGTTCCTGGTCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: LAWLPCLSLQGYLVPPHASPAIL*RGSWSV Trigger: GACTGACCAGGAACCTCTCCAAAGAATGGCAGGGGA...AGCGTGAGGAGGTACCAAGTAGCCTTGCAGACTGAGGCAGGGGAGCCAGGCCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
||
| CDS-3UTR CCA 90 bp | GCAACCCAGAGGAGGGGACAGCTAGAGTCACCCAGGACCACAGTGTCCACCCATTCCCCTGCCATTCTTTaGAGAGGTTCCTGGTCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: ATQRRGQLESPRTTVSTHSPAIL*RGSWSV Trigger: GACTGACCAGGAACCTCTCCAAAGAATGGCAGGGGA...ATGGGTGGACACTGTGGTCCTGGGTGACTCTAGCTGTCCCCTCCTCTGGGTTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054598.12 ENSMUST00000114206.9 |
||
| 3UTR CAA 72 bp | TTGGCCTGGCTCCCCTGCCTCAGTCTGCAAGGCTACTaGGTACCTCCTCACGCTCCGAGAAGTCTCACACTT | + |
|
Preference number: 4 (lower is better) Translates to: LAWLPCLSLQGY*VPPHAPRSLTL Trigger: AAGTGTGAGACTTCTCGGAGCGTGAGGAGGTACCAAGTAGCCTTGCAGACTGAGGCAGGGGAGCCAGGCCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
||
| CDS-3UTR TCA 90 bp | CTCCTGGTAAGATGTTGGCAGCTGTCAGAACAGCAAGGCTTTCTTCTTGAGGTCTTCTCCAGTGGGGCATaGGCAGCCTGGGGCTGCGAC | + |
|
Preference number: 4 (lower is better) Translates to: LLVRCWQLSEQQGFLLEVFSSGA*AAWGCD Trigger: GTCGCAGCCCCAGGCTGCTCATGCCCCACTGGAGAA...GACCTCAAGAAGAAAGCCTTGCTGTTCTGACAGCTGCCAACATCTTACCAGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114210.9 |
||
| CDS-3UTR TCA 90 bp | GCTGTGTCAGAGTCTGCCCCTGACAAGTCTTTCACTCACGTCCCAGACACTCTGTACACTCCTTCCCGTTaGAGGTCACACGGTCCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: AVSESAPDKSFTHVPDTLYTPSR*RSHGPQ Trigger: CTGGGGACCGTGTGACCTTCAACGGGAAGGAGTGTA...CAGAGTGTCTGGGACGTGAGTGAAAGACTTGTCAGGGGCAGACTCTGACACAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
||
| CDS-3UTR TCA 90 bp | CTGCCTGCCCTACTGACACAGAGAAGCAGAGCAAGGTGCAGGAGGGGATTTTCAGGGCCTGGCCATTCTTaGTTTCTAAGCCACAGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: LPALLTQRSRARCRRGFSGPGHS*FLSHSP Trigger: GGGGCTGTGGCTTAGAAATCAAGAATGGCCAGGCCC...TGAAAATCCCCTCCTGCACCTTGCTCTGCTTCTCTGTGTCAGTAGGGCAGGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
||
| CDS-3UTR TCA 90 bp | AGACTTTGGCCTGGCTCCCCTGCCTCAGTCTGCAAGGCTACTTGGTACCTCCTCCACAAGTCTTGCACTTaGAGCATCCCAGGTGCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: RLWPGSPASVCKATWYLLHKSCT*SIPGAS Trigger: ACTGGCACCTGGGATGCTTCAAGTGCAAGACTTGTG...GAGGAGGTACCAAGTAGCCTTGCAGACTGAGGCAGGGGAGCCAGGCCAAAGTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
||
| CDS-3UTR TCA 90 bp | GACTTTGGCCTGGCTCCCCTGCCTCAGTCTGCAAGGCTACTTGGTACCTCCTCACACAAGTCTTGCACTTaGAGCATCCCAGGTGCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: DFGLAPLPQSARLLGTSSHKSCT*SIPGAS Trigger: ACTGGCACCTGGGATGCTTCAAGTGCAAGACTTGTG...TGAGGAGGTACCAAGTAGCCTTGCAGACTGAGGCAGGGGAGCCAGGCCAAAGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
||
| CDS-3UTR TCA 90 bp | GCAAGAGCATCCTTGCTATACAAGGGACCATGCCTGCTGGATGCTCCTCAGGGCTGTCTGCATCCCCCTTaGGAAGCAGCCAGGTTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: ARASLLYKGPCLLDAPQGCLHPP*EAARLS Trigger: AGACAACCTGGCTGCTTCTCAAGGGGGATGCAGACA...GCCCTGAGGAGCATCCAGCAGGCATGGTCCCTTGTATAGCAAGGATGCTCTTGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
||
| CDS-3UTR TCA 90 bp | ACCATTCCTGCTGTGTCAGAGTCTGCCCCTGACAAGTCTTTCACTCACGTCCCACTGAGGGACAGCGACTaGCTGTCCAGGTCTGGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: TIPAVSESAPDKSFTHVPLRDSD*LSRSGE Trigger: CTCTCCAGACCTGGACAGTCAGTCGCTGTCCCTCAG...TGGGACGTGAGTGAAAGACTTGTCAGGGGCAGACTCTGACACAGCAGGAATGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
||
| CDS-3UTR GCA 90 bp | TGTGGCGGGAAGGAGTGGGTCAAGCTGGCACCTGGCCCTAAACTACAGGCAAGATGGAAGTACTTGTTCTaGACACGCAGCACCTCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: CGGKEWVKLAPGPKLQARWKYLF*TRSTSP Trigger: GGGAGAGGTGCTGCGTGTGCAGAACAAGTACTTCCA...TCTTGCCTGTAGTTTAGGGCCAGGTGCCAGCTTGACCCACTCCTTCCCGCCACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
||
| CDS-3UTR GCA 90 bp | TCGCAGACTTTGGCCTGGCTCCCCTGCCTCAGTCTGCAAGGCTACTTGGTACCTTTGAAGCATCCCAGGTaGCAGTGCTTGTCCAAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: SQTLAWLPCLSLQGYLVPLKHPR*QCLSKA Trigger: GGCTTTGGACAAGCACTGGCACCTGGGATGCTTCAA...AGGTACCAAGTAGCCTTGCAGACTGAGGCAGGGGAGCCAGGCCAAAGTCTGCGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
||
| CDS-3UTR GCA 90 bp | GCTGTGTCAGAGTCTGCCCCTGACAAGTCTTTCACTCACGTCCCAGACACTCTGCAGATGGAGGAGCCTTaGAGGTACATCTCCTCGCCC | + |
|
Preference number: 4 (lower is better) Translates to: AVSESAPDKSFTHVPDTLQMEEP*RYISSP Trigger: GGGCGAGGAGATGTACCTGCAAGGCTCCTCCATCTG...CAGAGTGTCTGGGACGTGAGTGAAAGACTTGTCAGGGGCAGACTCTGACACAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
||
| CDS-3UTR GCA 90 bp | CTGCCTGCCCTACTGACACAGAGAAGCAGAGCAAGGTGCAGGAGGGGATTTTCATGTCGACATGCCGGATaGCAGATGGAGGAGCCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: LPALLTQRSRARCRRGFSCRHAG*QMEEPC Trigger: GCAAGGCTCCTCCATCTGGCATCCGGCATGTCGACA...TGAAAATCCCCTCCTGCACCTTGCTCTGCTTCTCTGTGTCAGTAGGGCAGGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
||
| CDS-3UTR GCA 90 bp | AGACTTTGGCCTGGCTCCCCTGCCTCAGTCTGCAAGGCTACTTGGTACCTCCTCGTAGAGGCTGTCCCCTaGCATTCTTTGGAGAGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: RLWPGSPASVCKATWYLLVEAVP*HSLERF Trigger: GAACCTCTCCAAAGAATGGCAGGGGACAGCCTCTAC...GAGGAGGTACCAAGTAGCCTTGCAGACTGAGGCAGGGGAGCCAGGCCAAAGTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
||
| CDS-3UTR CCA 90 bp | ACTGCTCTGTCCCTATCTCCTAGGATAGCTGGCTGCAACACTGCCCTGATGCCCTGTTGCCCAGCAATGTaGGTGGGGAACACTTCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: TALSLSPRIAGCNTALMPCCPAM*VGNTSG Trigger: GCCAGAAGTGTTCCCCACCCACATTGCTGGGCAACA...GGGCATCAGGGCAGTGTTGCAGCCAGCTATCCTAGGAGATAGGGACAGAGCAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
||
| CDS-3UTR CCA 90 bp | CCTCGCAGACTTTGGCCTGGCTCCCCTGCCTCAGTCTGCAAGGCTACTTGGTACCTGACTGTCCAGGTCTaGAGAGTTAGTTCTGGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: PRRLWPGSPASVCKATWYLTVQV*RVSSGV Trigger: GACACCAGAACTAACTCTCCAGACCTGGACAGTCAG...GTACCAAGTAGCCTTGCAGACTGAGGCAGGGGAGCCAGGCCAAAGTCTGCGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
||
| CDS-3UTR CCA 90 bp | ACGCTCCGAGAAGTCTCACACTTACCATTCCTGCTGTGTCAGAGTCTGCCCCTGCTTTGGAGAGGTTCCTaGTCAGTCCCGCTGCTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: TLREVSHLPFLLCQSLPLLWRGS*SVPLLR Trigger: CCTCAGCAGCGGGACTGACCAGGAACCTCTCCAAAG...CAGGGGCAGACTCTGACACAGCAGGAATGGTAAGTGTGAGACTTCTCGGAGCGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
||
| CDS-3UTR CCA 90 bp | TCGCAGACTTTGGCCTGGCTCCCCTGCCTCAGTCTGCAAGGCTACTTGGTACCTTCCCCTGCCATTCTTTaGAGAGGTTCCTGGTCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: SQTLAWLPCLSLQGYLVPSPAIL*RGSWSV Trigger: GACTGACCAGGAACCTCTCCAAAGAATGGCAGGGGA...AGGTACCAAGTAGCCTTGCAGACTGAGGCAGGGGAGCCAGGCCAAAGTCTGCGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
||
| CDS-3UTR CCA 90 bp | GCATCCTTGCTATACAAGGGACCATGCCTGCTGGATGCTCCTCAGGGCCTGGCCGGGACAGACAGCTACTaGTACCAACACTCACAGTAC | + |
|
Preference number: 4 (lower is better) Translates to: ASLLYKGPCLLDAPQGLAGTDSY*YQHSQY Trigger: GTACTGTGAGTGTTGGTACCAGTAGCTGTCTGTCCC...GGCCAGGCCCTGAGGAGCATCCAGCAGGCATGGTCCCTTGTATAGCAAGGATGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
||
| CDS-3UTR TCA 90 bp | TCCTCACGCTCCGAGAAGTCTCACACTTACCATTCCTGCTGTGTCAGAGTCTGCTACACTCCTTCCCGTTaGAGGTCACACGGTCCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: SSRSEKSHTYHSCCVRVCYTPSR*RSHGPQ Trigger: CTGGGGACCGTGTGACCTTCAACGGGAAGGAGTGTA...GCAGACTCTGACACAGCAGGAATGGTAAGTGTGAGACTTCTCGGAGCGTGAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
||
| CDS-3UTR TCA 90 bp | CTGAGCGAGCGAGTGAGTGTCTTTGAGGCTGTCTGTGTGACACATACAAAGGAGCATCTCCTCGCCCTCTaGGAACATCTGGCCGCACCT | + |
|
Preference number: 4 (lower is better) Translates to: LSERVSVFEAVCVTHTKEHLLAL*EHLAAP Trigger: AGGTGCGGCCAGATGTTCTCAGAGGGCGAGGAGATG...CTCCTTTGTATGTGTCACACAGACAGCCTCAAAGACACTCACTCGCTCGCTCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
||
| CDS-3UTR TCA 90 bp | CTACTTGGTACCTCCTCACGCTCCGAGAAGTCTCACACTTACCATTCCTGCTGTCATCTCCTCGCCCTCTaGGAACATCTGGCCGCACCT | + |
|
Preference number: 4 (lower is better) Translates to: LLGTSSRSEKSHTYHSCCHLLAL*EHLAAP Trigger: AGGTGCGGCCAGATGTTCTCAGAGGGCGAGGAGATG...ACAGCAGGAATGGTAAGTGTGAGACTTCTCGGAGCGTGAGGAGGTACCAAGTAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
||
| CDS-3UTR TCA 90 bp | GCTGTGTCAGAGTCTGCCCCTGACAAGTCTTTCACTCACGTCCCAGACACTCTGTGTCTGCATCCCCCTTaGGAAGCAGCCAGGTTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: AVSESAPDKSFTHVPDTLCLHPP*EAARLS Trigger: AGACAACCTGGCTGCTTCTCAAGGGGGATGCAGACA...CAGAGTGTCTGGGACGTGAGTGAAAGACTTGTCAGGGGCAGACTCTGACACAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
||
| CDS-3UTR GCA 90 bp | ACTGCTCTGTCCCTATCTCCTAGGATAGCTGGCTGCAACACTGCCCTGATGCCCGCAGCACCTCTCCCTTaGACACATTCCCACAGGTAT | + |
|
Preference number: 4 (lower is better) Translates to: TALSLSPRIAGCNTALMPAAPLP*THSHRY Trigger: ATACCTGTGGGAATGTGTGCAAGGGAGAGGTGCTGC...GGGCATCAGGGCAGTGTTGCAGCCAGCTATCCTAGGAGATAGGGACAGAGCAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
||
| CDS-3UTR GCA 90 bp | ACTGCTCTGTCCCTATCTCCTAGGATAGCTGGCTGCAACACTGCCCTGATGCCCTTGAAGCATCCCAGGTaGCAGTGCTTGTCCAAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: TALSLSPRIAGCNTALMPLKHPR*QCLSKA Trigger: GGCTTTGGACAAGCACTGGCACCTGGGATGCTTCAA...GGGCATCAGGGCAGTGTTGCAGCCAGCTATCCTAGGAGATAGGGACAGAGCAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
||
| CDS-3UTR GCA 90 bp | CCGAGAAGTCTCACACTTACCATTCCTGCTGTGTCAGAGTCTGCCCCTGACAAGCAGATGGAGGAGCCTTaGAGGTACATCTCCTCGCCC | + |
|
Preference number: 4 (lower is better) Translates to: PRSLTLTIPAVSESAPDKQMEEP*RYISSP Trigger: GGGCGAGGAGATGTACCTGCAAGGCTCCTCCATCTG...CTTGTCAGGGGCAGACTCTGACACAGCAGGAATGGTAAGTGTGAGACTTCTCGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
||
| CDS-3UTR GCA 90 bp | TCCTCACGCTCCGAGAAGTCTCACACTTACCATTCCTGCTGTGTCAGAGTCTGCCAGATGGAGGAGCCTTaGAGGTACATCTCCTCGCCC | + |
|
Preference number: 4 (lower is better) Translates to: SSRSEKSHTYHSCCVRVCQMEEP*RYISSP Trigger: GGGCGAGGAGATGTACCTGCAAGGCTCCTCCATCTG...GCAGACTCTGACACAGCAGGAATGGTAAGTGTGAGACTTCTCGGAGCGTGAGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
||
| CDS-3UTR GCA 90 bp | CTGTGTCAGAGTCTGCCCCTGACAAGTCTTTCACTCACGTCCCAGACACTCTGTTGTCGACATGCCGGATaGCAGATGGAGGAGCCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: LCQSLPLTSLSLTSQTLCCRHAG*QMEEPC Trigger: GCAAGGCTCCTCCATCTGGCATCCGGCATGTCGACA...ACAGAGTGTCTGGGACGTGAGTGAAAGACTTGTCAGGGGCAGACTCTGACACAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
||
| CDS-3UTR GCA 90 bp | CTGTGTCAGAGTCTGCCCCTGACAAGTCTTTCACTCACGTCCCAGACACTCTGTTGGGGCTGGAGGTCCTaGACTGCTTGTAGGACCGAT | + |
|
Preference number: 4 (lower is better) Translates to: LCQSLPLTSLSLTSQTLCWGWRS*TACRTD Trigger: ATCGGTCCTACAAGCAGTGCAGGACCTCCAGCCCCA...ACAGAGTGTCTGGGACGTGAGTGAAAGACTTGTCAGGGGCAGACTCTGACACAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
||
| CDS-3UTR GCA 90 bp | CTGAGCGAGCGAGTGAGTGTCTTTGAGGCTGTCTGTGTGACACATACAAAGGAGCTGAGAGACTCGGGGTaGTACGGCCACTTTCGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LSERVSVFEAVCVTHTKELRDSG*YGHFRC Trigger: GCAGCGAAAGTGGCCGTAGCACCCCGAGTCTCTCAG...CTCCTTTGTATGTGTCACACAGACAGCCTCAAAGACACTCACTCGCTCGCTCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
||
| CDS-3UTR GCA 90 bp | GCAAGAGCATCCTTGCTATACAAGGGACCATGCCTGCTGGATGCTCCTCAGGGCTGTCCTGGTCAAAGCTaGTGTCCTCCACGTCCAATC | + |
|
Preference number: 4 (lower is better) Translates to: ARASLLYKGPCLLDAPQGCPGQS*CPPRPI Trigger: GATTGGACGTGGAGGACAGCAGCTTTGACCAGGACA...GCCCTGAGGAGCATCCAGCAGGCATGGTCCCTTGTATAGCAAGGATGCTCTTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
||
| CDS-3UTR CCA 90 bp | GCTGTGTCAGAGTCTGCCCCTGACAAGTCTTTCACTCACGTCCCAGACACTCTGGGTGGGGAACACTTCTaGCACATACACTCCTTCCCG | + |
|
Preference number: 4 (lower is better) Translates to: AVSESAPDKSFTHVPDTLGGEHF*HIHSFP Trigger: CGGGAAGGAGTGTATGTGCCAGAAGTGTTCCCCACC...CAGAGTGTCTGGGACGTGAGTGAAAGACTTGTCAGGGGCAGACTCTGACACAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
||
| CDS-3UTR CCA 90 bp | CCTGCTGTGTCAGAGTCTGCCCCTGACAAGTCTTTCACTCACGTCCCAGACACTGCCCAGCAATGTGGGTaGGGAACACTTCTGGCACAT | + |
|
Preference number: 4 (lower is better) Translates to: PAVSESAPDKSFTHVPDTAQQCG*GTLLAH Trigger: ATGTGCCAGAAGTGTTCCCCACCCACATTGCTGGGC...AGTGTCTGGGACGTGAGTGAAAGACTTGTCAGGGGCAGACTCTGACACAGCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
||
| CDS-3UTR CCA 90 bp | CCTCGCAGACTTTGGCCTGGCTCCCCTGCCTCAGTCTGCAAGGCTACTTGGTACAAAGCCACCAGGGCCTaGCCATTCTTGATTTCTAAG | + |
|
Preference number: 4 (lower is better) Translates to: PRRLWPGSPASVCKATWYKATRA*PFLISK Trigger: CTTAGAAATCAAGAATGGCCAGGCCCTGGTGGCTTT...GTACCAAGTAGCCTTGCAGACTGAGGCAGGGGAGCCAGGCCAAAGTCTGCGAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
||
| CDS-3UTR CCA 90 bp | TCCTCACGCTCCGAGAAGTCTCACACTTACCATTCCTGCTGTGTCAGAGTCTGCCCCTCTGAGAACATCTaGCCGCACCTGACGCATAGC | + |
|
Preference number: 4 (lower is better) Translates to: SSRSEKSHTYHSCCVRVCPSENI*PHLTHS Trigger: GCTATGCGTCAGGTGCGGCCAGATGTTCTCAGAGGG...GCAGACTCTGACACAGCAGGAATGGTAAGTGTGAGACTTCTCGGAGCGTGAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
||
| CDS-3UTR CCA 90 bp | CCTGCTGTGTCAGAGTCTGCCCCTGACAAGTCTTTCACTCACGTCCCAGACACTATGCCGGATGCCAGATaGAGGAGCCTTGCAGGTACA | + |
|
Preference number: 4 (lower is better) Translates to: PAVSESAPDKSFTHVPDTMPDAR*RSLAGT Trigger: TGTACCTGCAAGGCTCCTCCATCTGGCATCCGGCAT...AGTGTCTGGGACGTGAGTGAAAGACTTGTCAGGGGCAGACTCTGACACAGCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
||
| CDS-3UTR CCA 90 bp | CTGCCTGCCCTACTGACACAGAGAAGCAGAGCAAGGTGCAGGAGGGGATTTTCATCTTGTCTTCAGTCCTaGCTGCCTGTCGACATGCCG | + |
|
Preference number: 4 (lower is better) Translates to: LPALLTQRSRARCRRGFSSCLQS*LPVDMP Trigger: CGGCATGTCGACAGGCAGCCAGGACTGAAGACAAGA...TGAAAATCCCCTCCTGCACCTTGCTCTGCTTCTCTGTGTCAGTAGGGCAGGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
||
| CDS-3UTR CCA 90 bp | TTTGGCCTGGCTCCCCTGCCTCAGTCTGCAAGGCTACTTGGTACCTCCTCACGCAGATCGCTTTGTTTTTaGGAAGAGCAGCCAAGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: FGLAPLPQSARLLGTSSRRSLCF*EEQPSP Trigger: GGGACTTGGCTGCTCTTCCCAAAAACAAAGCGATCT...GCGTGAGGAGGTACCAAGTAGCCTTGCAGACTGAGGCAGGGGAGCCAGGCCAAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
||
| CDS-3UTR CCA 90 bp | CGCAGACTTTGGCCTGGCTCCCCTGCCTCAGTCTGCAAGGCTACTTGGTACCTCAGATCGCTTTGTTTTTaGGAAGAGCAGCCAAGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: RRLWPGSPASVCKATWYLRSLCF*EEQPSP Trigger: GGGACTTGGCTGCTCTTCCCAAAAACAAAGCGATCT...GAGGTACCAAGTAGCCTTGCAGACTGAGGCAGGGGAGCCAGGCCAAAGTCTGCG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
||
| CDS-3UTR CCA 90 bp | CCGAGAAGTCTCACACTTACCATTCCTGCTGTGTCAGAGTCTGCCCCTGACAAGCTTTGGAGAGGTTCCTaGTCAGTCCCGCTGCTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: PRSLTLTIPAVSESAPDKLWRGS*SVPLLR Trigger: CCTCAGCAGCGGGACTGACCAGGAACCTCTCCAAAG...CTTGTCAGGGGCAGACTCTGACACAGCAGGAATGGTAAGTGTGAGACTTCTCGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
||
| CDS-3UTR CCA 90 bp | GCAAGAGCATCCTTGCTATACAAGGGACCATGCCTGCTGGATGCTCCTCAGGGCTCCCCTGCCATTCTTTaGAGAGGTTCCTGGTCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: ARASLLYKGPCLLDAPQGSPAIL*RGSWSV Trigger: GACTGACCAGGAACCTCTCCAAAGAATGGCAGGGGA...GCCCTGAGGAGCATCCAGCAGGCATGGTCCCTTGTATAGCAAGGATGCTCTTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
||
| CDS-3UTR CCA 90 bp | TGTGGCGGGAAGGAGTGGGTCAAGCTGGCACCTGGCCCTAAACTACAGGCAAGAGGGACAGACAGCTACTaGTACCAACACTCACAGTAC | + |
|
Preference number: 4 (lower is better) Translates to: CGGKEWVKLAPGPKLQARGTDSY*YQHSQY Trigger: GTACTGTGAGTGTTGGTACCAGTAGCTGTCTGTCCC...TCTTGCCTGTAGTTTAGGGCCAGGTGCCAGCTTGACCCACTCCTTCCCGCCACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
||
| CDS-3UTR CCA 90 bp | AAGGTGCTGGGCTGGCTGACTGCTCTGTCCCTATCTCCTAGGATAGCTGGCTGCGGGACAGACAGCTACTaGTACCAACACTCACAGTAC | + |
|
Preference number: 4 (lower is better) Translates to: KVLGWLTALSLSPRIAGCGTDSY*YQHSQY Trigger: GTACTGTGAGTGTTGGTACCAGTAGCTGTCTGTCCC...GCAGCCAGCTATCCTAGGAGATAGGGACAGAGCAGTCAGCCAGCCCAGCACCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
||
| CDS-3UTR TCA 90 bp | CGCAGACTTTGGCCTGGCTCCCCTGCCTCAGTCTGCAAGGCTACTTGGTACCTCTGCACACAAAGCACCTaGTGTGGAAGTACTTGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: RRLWPGSPASVCKATWYLCTQST*CGSTCS Trigger: AGAACAAGTACTTCCACATCAGGTGCTTTGTGTGCA...GAGGTACCAAGTAGCCTTGCAGACTGAGGCAGGGGAGCCAGGCCAAAGTCTGCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
||
| CDS-3UTR TCA 90 bp | GCTGTGTCAGAGTCTGCCCCTGACAAGTCTTTCACTCACGTCCCAGACACTCTGCACAAGTCTTGCACTTaGAGCATCCCAGGTGCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: AVSESAPDKSFTHVPDTLHKSCT*SIPGAS Trigger: ACTGGCACCTGGGATGCTTCAAGTGCAAGACTTGTG...CAGAGTGTCTGGGACGTGAGTGAAAGACTTGTCAGGGGCAGACTCTGACACAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
||
| CDS-3UTR TCA 90 bp | CTACTTGGTACCTCCTCACGCTCCGAGAAGTCTCACACTTACCATTCCTGCTGTACATCTGGCCGCACCTaGCGCATAGCGCACATGAAG | + |
|
Preference number: 4 (lower is better) Translates to: LLGTSSRSEKSHTYHSCCTSGRT*RIAHMK Trigger: CTTCATGTGCGCTATGCGTCAGGTGCGGCCAGATGT...ACAGCAGGAATGGTAAGTGTGAGACTTCTCGGAGCGTGAGGAGGTACCAAGTAG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
||
| CDS-3UTR TCA 90 bp | AGCTCAGGCTGGCCTCAAACTCACAGCAATCTTTCTGCCATCCAAATGTTAGGGCTGAGGGACAGCGACTaGCTGTCCAGGTCTGGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: SSGWPQTHSNLSAIQMLGLRDSD*LSRSGE Trigger: CTCTCCAGACCTGGACAGTCAGTCGCTGTCCCTCAG...CCCTAACATTTGGATGGCAGAAAGATTGCTGTGAGTTTGAGGCCAGCCTGAGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125378.2 |
||
| CDS-3UTR TCA 90 bp | AGCTCAGGCTGGCCTCAAACTCACAGCAATCTTTCTGCCATCCAAATGTTAGGGGAAGAGCCACTCACGTaGGTAGAGGCTGTCCCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: SSGWPQTHSNLSAIQMLGEEPLT*VEAVPC Trigger: GCAGGGGACAGCCTCTACTCACGTGAGTGGCTCTTC...CCCTAACATTTGGATGGCAGAAAGATTGCTGTGAGTTTGAGGCCAGCCTGAGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125378.2 |
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| CDS-3UTR GCA 90 bp | CTGAGCGAGCGAGTGAGTGTCTTTGAGGCTGTCTGTGTGACACATACAAAGGAGTACACAGGATCGCAGTaGTGGCCGGCTTCTCCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: LSERVSVFEAVCVTHTKEYTGSQ*WPASPV Trigger: CACTGGAGAAGCCGGCCAGCACTGCGATCCTGTGTA...CTCCTTTGTATGTGTCACACAGACAGCCTCAAAGACACTCACTCGCTCGCTCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
||
| CDS-3UTR GCA 90 bp | GCTGTGTCAGAGTCTGCCCCTGACAAGTCTTTCACTCACGTCCCAGACACTCTGGCAGCACCTCTCCCTTaGACACATTCCCACAGGTAT | + |
|
Preference number: 4 (lower is better) Translates to: AVSESAPDKSFTHVPDTLAAPLP*THSHRY Trigger: ATACCTGTGGGAATGTGTGCAAGGGAGAGGTGCTGC...CAGAGTGTCTGGGACGTGAGTGAAAGACTTGTCAGGGGCAGACTCTGACACAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
||
| CDS-3UTR GCA 90 bp | CTGCCTGCCCTACTGACACAGAGAAGCAGAGCAAGGTGCAGGAGGGGATTTTCATGGAAGTACTTGTTCTaGACACGCAGCACCTCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: LPALLTQRSRARCRRGFSWKYLF*TRSTSP Trigger: GGGAGAGGTGCTGCGTGTGCAGAACAAGTACTTCCA...TGAAAATCCCCTCCTGCACCTTGCTCTGCTTCTCTGTGTCAGTAGGGCAGGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
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| CDS-3UTR GCA 90 bp | CTCACGCTCCGAGAAGTCTCACACTTACCATTCCTGCTGTGTCAGAGTCTGCCCTGGAAGTACTTGTTCTaGACACGCAGCACCTCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: LTLREVSHLPFLLCQSLPWKYLF*TRSTSP Trigger: GGGAGAGGTGCTGCGTGTGCAGAACAAGTACTTCCA...GGGCAGACTCTGACACAGCAGGAATGGTAAGTGTGAGACTTCTCGGAGCGTGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
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| CDS-3UTR GCA 90 bp | CTCACACTTACCATTCCTGCTGTGTCAGAGTCTGCCCCTGACAAGTCTTTCACTGGCTGCCTGTCGACATaGCGGATGCCAGATGGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: LTLTIPAVSESAPDKSFTGCLST*RMPDGG Trigger: TCCTCCATCTGGCATCCGGCATGTCGACAGGCAGCC...AGTGAAAGACTTGTCAGGGGCAGACTCTGACACAGCAGGAATGGTAAGTGTGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
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| CDS-3UTR GCA 90 bp | CGTGTCCGGTCCACGTCTTTGGGCAGTTTCACACGAATTCGGTTTGTTACGATGTGGGGCTGGAGGTCCTaGACTGCTTGTAGGACCGAT | + |
|
Preference number: 4 (lower is better) Translates to: RVRSTSLGSFTRIRFVTMWGWRS*TACRTD Trigger: ATCGGTCCTACAAGCAGTGCAGGACCTCCAGCCCCA...CATCGTAACAAACCGAATTCGTGTGAAACTGCCCAAAGACGTGGACCGGACACG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114210.9 |
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| CDS-3UTR GCA 90 bp | CTCACACTTACCATTCCTGCTGTGTCAGAGTCTGCCCCTGACAAGTCTTTCACTCTGAGAGACTCGGGGTaGTACGGCCACTTTCGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LTLTIPAVSESAPDKSFTLRDSG*YGHFRC Trigger: GCAGCGAAAGTGGCCGTAGCACCCCGAGTCTCTCAG...AGTGAAAGACTTGTCAGGGGCAGACTCTGACACAGCAGGAATGGTAAGTGTGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
||
| CDS-3UTR GCA 90 bp | AGCTCAGGCTGGCCTCAAACTCACAGCAATCTTTCTGCCATCCAAATGTTAGGGCTGAGAGACTCGGGGTaGTACGGCCACTTTCGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: SSGWPQTHSNLSAIQMLGLRDSG*YGHFRC Trigger: GCAGCGAAAGTGGCCGTAGCACCCCGAGTCTCTCAG...CCCTAACATTTGGATGGCAGAAAGATTGCTGTGAGTTTGAGGCCAGCCTGAGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125378.2 |
||
| CDS-3UTR GCA 90 bp | CTGCCTGCCCTACTGACACAGAGAAGCAGAGCAAGGTGCAGGAGGGGATTTTCATGTCCTGGTCAAAGCTaGTGTCCTCCACGTCCAATC | + |
|
Preference number: 4 (lower is better) Translates to: LPALLTQRSRARCRRGFSCPGQS*CPPRPI Trigger: GATTGGACGTGGAGGACAGCAGCTTTGACCAGGACA...TGAAAATCCCCTCCTGCACCTTGCTCTGCTTCTCTGTGTCAGTAGGGCAGGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
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| CDS-3UTR GCA 90 bp | GCATCCTTGCTATACAAGGGACCATGCCTGCTGGATGCTCCTCAGGGCCTGGCCGGTCAAACTCCTCGATaGTCATCCCAAACACTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: ASLLYKGPCLLDAPQGLAGQTPR*SSQTLL Trigger: AAGAAGTGTTTGGGATGAGCATCGAGGAGTTTGACC...GGCCAGGCCCTGAGGAGCATCCAGCAGGCATGGTCCCTTGTATAGCAAGGATGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 |
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| CDS-3UTR CCA 90 bp | TCCTCACGCTCCGAGAAGTCTCACACTTACCATTCCTGCTGTGTCAGAGTCTGCGGTGGGGAACACTTCTaGCACATACACTCCTTCCCG | + |
|
Preference number: 4 (lower is better) Translates to: SSRSEKSHTYHSCCVRVCGGEHF*HIHSFP Trigger: CGGGAAGGAGTGTATGTGCCAGAAGTGTTCCCCACC...GCAGACTCTGACACAGCAGGAATGGTAAGTGTGAGACTTCTCGGAGCGTGAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
||
| CDS-3UTR CCA 90 bp | ACCATTCCTGCTGTGTCAGAGTCTGCCCCTGACAAGTCTTTCACTCACGTCCCAGCCCAGCAATGTGGGTaGGGAACACTTCTGGCACAT | + |
|
Preference number: 4 (lower is better) Translates to: TIPAVSESAPDKSFTHVPAQQCG*GTLLAH Trigger: ATGTGCCAGAAGTGTTCCCCACCCACATTGCTGGGC...TGGGACGTGAGTGAAAGACTTGTCAGGGGCAGACTCTGACACAGCAGGAATGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
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| CDS-3UTR CCA 90 bp | TGGTACCTCCTCACGCTCCGAGAAGTCTCACACTTACCATTCCTGCTGTGTCAGTGTTGCCCAGCAATGTaGGTGGGGAACACTTCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: WYLLTLREVSHLPFLLCQCCPAM*VGNTSG Trigger: GCCAGAAGTGTTCCCCACCCACATTGCTGGGCAACA...CTGACACAGCAGGAATGGTAAGTGTGAGACTTCTCGGAGCGTGAGGAGGTACCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
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| CDS-3UTR CCA 90 bp | TGTGGCGGGAAGGAGTGGGTCAAGCTGGCACCTGGCCCTAAACTACAGGCAAGAAAAGCCACCAGGGCCTaGCCATTCTTGATTTCTAAG | + |
|
Preference number: 4 (lower is better) Translates to: CGGKEWVKLAPGPKLQARKATRA*PFLISK Trigger: CTTAGAAATCAAGAATGGCCAGGCCCTGGTGGCTTT...TCTTGCCTGTAGTTTAGGGCCAGGTGCCAGCTTGACCCACTCCTTCCCGCCACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
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| CDS-3UTR CCA 90 bp | TCACGTGACAGCATGCTTCCTGGGCATGCGTGTTTTATGTGGTGGAGGGCTACAATGCCGGATGCCAGATaGAGGAGCCTTGCAGGTACA | + |
|
Preference number: 4 (lower is better) Translates to: SRDSMLPGHACFMWWRATMPDAR*RSLAGT Trigger: TGTACCTGCAAGGCTCCTCCATCTGGCATCCGGCAT...TGTAGCCCTCCACCACATAAAACACGCATGCCCAGGAAGCATGCTGTCACGTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054598.12 ENSMUST00000114206.9 |
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| CDS-3UTR CCA 90 bp | TCGCAGACTTTGGCCTGGCTCCCCTGCCTCAGTCTGCAAGGCTACTTGGTACCTAGATCGCTTTGTTTTTaGGAAGAGCAGCCAAGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: SQTLAWLPCLSLQGYLVPRSLCF*EEQPSP Trigger: GGGACTTGGCTGCTCTTCCCAAAAACAAAGCGATCT...AGGTACCAAGTAGCCTTGCAGACTGAGGCAGGGGAGCCAGGCCAAAGTCTGCGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
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| CDS-3UTR CCA 90 bp | TCAAACTCCTCGATGCTCATCCCAAACACTTCTTGGAACTCCTCAGGTGATAGGCGGCAGAGCTGGGGCTaGAGGTCCTGCACTGCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: SNSSMLIPNTSWNSSGDRRQSWG*RSCTAC Trigger: ACAAGCAGTGCAGGACCTCCAGCCCCAGCTCTGCCG...CCTATCACCTGAGGAGTTCCAAGAAGTGTTTGGGATGAGCATCGAGGAGTTTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114210.9 |
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| CDS-3UTR CCA 90 bp | GGAGATGGATACATTTCACATGTATTTACAAACGGCACTGCTGAGCGAGCGAGTCTGAGCCGGCAGAGCTaGGGCTGGAGGTCCTGCACT | + |
|
Preference number: 4 (lower is better) Translates to: GDGYISHVFTNGTAERASLSRQS*GWRSCT Trigger: AGTGCAGGACCTCCAGCCCCAGCTCTGCCGGCTCAG...ACTCGCTCGCTCAGCAGTGCCGTTTGTAAATACATGTGAAATGTATCCATCTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
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| CDS-3UTR CCA 90 bp | CTCACGCTCCGAGAAGTCTCACACTTACCATTCCTGCTGTGTCAGAGTCTGCCCTCCCCTGCCATTCTTTaGAGAGGTTCCTGGTCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: LTLREVSHLPFLLCQSLPSPAIL*RGSWSV Trigger: GACTGACCAGGAACCTCTCCAAAGAATGGCAGGGGA...GGGCAGACTCTGACACAGCAGGAATGGTAAGTGTGAGACTTCTCGGAGCGTGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
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| CDS-3UTR CCA 90 bp | TACATTTCACATGTATTTACAAACGGCACTGCTGAGCGAGCGAGTGAGTGTCTTCTCGCGTGCCCCAGCTaGCATCCGGGTCTGCTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: YISHVFTNGTAERASECLLACPS*HPGLLH Trigger: GTGGAGCAGACCCGGATGCCAGCTGGGGCACGCGAG...AAGACACTCACTCGCTCGCTCAGCAGTGCCGTTTGTAAATACATGTGAAATGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054598.12 ENSMUST00000114210.9 |
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| CDS-3UTR CCA 90 bp | ACTGCTCTGTCCCTATCTCCTAGGATAGCTGGCTGCAACACTGCCCTGATGCCCTCCGGTCCACGTCTTTaGGCAGTTTCACACGAATTC | + |
|
Preference number: 4 (lower is better) Translates to: TALSLSPRIAGCNTALMPSGPRL*AVSHEF Trigger: GAATTCGTGTGAAACTGCCCAAAGACGTGGACCGGA...GGGCATCAGGGCAGTGTTGCAGCCAGCTATCCTAGGAGATAGGGACAGAGCAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 |
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| CDS-3UTR CCA 90 bp | TTGGCCTGGCTCCCCTGCCTCAGTCTGCAAGGCTACTTGGTACCTCCTCACGCTATCCCAAACACTTCTTaGAACTCCTCAGGTGATAGG | + |
|
Preference number: 4 (lower is better) Translates to: LAWLPCLSLQGYLVPPHAIPNTS*NSSGDR Trigger: CCTATCACCTGAGGAGTTCCAAGAAGTGTTTGGGAT...AGCGTGAGGAGGTACCAAGTAGCCTTGCAGACTGAGGCAGGGGAGCCAGGCCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 |
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| CDS-3UTR TCA 90 bp | GAAACCTTTATTCTAGGGATTTGGCCATCAGGGGGCGCTCTTCTCTTAGCGACTTACACTCCTTCCCGTTaGAGGTCACACGGTCCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: ETFILGIWPSGGALLLATYTPSR*RSHGPQ Trigger: CTGGGGACCGTGTGACCTTCAACGGGAAGGAGTGTA...AGTCGCTAAGAGAAGAGCGCCCCCTGATGGCCAAATCCCTAGAATAAAGGTTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
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| CDS-3UTR TCA 90 bp | CTCACACTTACCATTCCTGCTGTGTCAGAGTCTGCCCCTGACAAGTCTTTCACTGGGCCTGGCCATTCTTaGTTTCTAAGCCACAGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: LTLTIPAVSESAPDKSFTGPGHS*FLSHSP Trigger: GGGGCTGTGGCTTAGAAATCAAGAATGGCCAGGCCC...AGTGAAAGACTTGTCAGGGGCAGACTCTGACACAGCAGGAATGGTAAGTGTGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
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| CDS-3UTR TCA 90 bp | TGGTACCTCCTCACGCTCCGAGAAGTCTCACACTTACCATTCCTGCTGTGTCAGCACAAGTCTTGCACTTaGAGCATCCCAGGTGCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: WYLLTLREVSHLPFLLCQHKSCT*SIPGAS Trigger: ACTGGCACCTGGGATGCTTCAAGTGCAAGACTTGTG...CTGACACAGCAGGAATGGTAAGTGTGAGACTTCTCGGAGCGTGAGGAGGTACCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
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| CDS-3UTR TCA 90 bp | GTCTCACACTTACCATTCCTGCTGTGTCAGAGTCTGCCCCTGACAAGTCTTTCAACATCTGGCCGCACCTaGCGCATAGCGCACATGAAG | + |
|
Preference number: 4 (lower is better) Translates to: VSHLPFLLCQSLPLTSLSTSGRT*RIAHMK Trigger: CTTCATGTGCGCTATGCGTCAGGTGCGGCCAGATGT...TGAAAGACTTGTCAGGGGCAGACTCTGACACAGCAGGAATGGTAAGTGTGAGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
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| CDS-3UTR GCA 90 bp | TCCTCACGCTCCGAGAAGTCTCACACTTACCATTCCTGCTGTGTCAGAGTCTGCGCAGCACCTCTCCCTTaGACACATTCCCACAGGTAT | + |
|
Preference number: 4 (lower is better) Translates to: SSRSEKSHTYHSCCVRVCAAPLP*THSHRY Trigger: ATACCTGTGGGAATGTGTGCAAGGGAGAGGTGCTGC...GCAGACTCTGACACAGCAGGAATGGTAAGTGTGAGACTTCTCGGAGCGTGAGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
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| CDS-3UTR GCA 90 bp | ACCATTCCTGCTGTGTCAGAGTCTGCCCCTGACAAGTCTTTCACTCACGTCCCATGGAAGTACTTGTTCTaGACACGCAGCACCTCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: TIPAVSESAPDKSFTHVPWKYLF*TRSTSP Trigger: GGGAGAGGTGCTGCGTGTGCAGAACAAGTACTTCCA...TGGGACGTGAGTGAAAGACTTGTCAGGGGCAGACTCTGACACAGCAGGAATGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
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| CDS-3UTR GCA 90 bp | CTGTGTCAGAGTCTGCCCCTGACAAGTCTTTCACTCACGTCCCAGACACTCTGTTTGAAGCATCCCAGGTaGCAGTGCTTGTCCAAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: LCQSLPLTSLSLTSQTLCLKHPR*QCLSKA Trigger: GGCTTTGGACAAGCACTGGCACCTGGGATGCTTCAA...ACAGAGTGTCTGGGACGTGAGTGAAAGACTTGTCAGGGGCAGACTCTGACACAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
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| CDS-3UTR GCA 90 bp | CCGAGAAGTCTCACACTTACCATTCCTGCTGTGTCAGAGTCTGCCCCTGACAAGTTGAAGCATCCCAGGTaGCAGTGCTTGTCCAAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: PRSLTLTIPAVSESAPDKLKHPR*QCLSKA Trigger: GGCTTTGGACAAGCACTGGCACCTGGGATGCTTCAA...CTTGTCAGGGGCAGACTCTGACACAGCAGGAATGGTAAGTGTGAGACTTCTCGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
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| CDS-3UTR GCA 90 bp | ACCATTCCTGCTGTGTCAGAGTCTGCCCCTGACAAGTCTTTCACTCACGTCCCATTGAAGCATCCCAGGTaGCAGTGCTTGTCCAAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: TIPAVSESAPDKSFTHVPLKHPR*QCLSKA Trigger: GGCTTTGGACAAGCACTGGCACCTGGGATGCTTCAA...TGGGACGTGAGTGAAAGACTTGTCAGGGGCAGACTCTGACACAGCAGGAATGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
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| CDS-3UTR GCA 90 bp | AAGGTGCTGGGCTGGCTGACTGCTCTGTCCCTATCTCCTAGGATAGCTGGCTGCCTTGCTGATGTACTCTaGATTGAGGAGTTTCCCACA | + |
|
Preference number: 4 (lower is better) Translates to: KVLGWLTALSLSPRIAGCLADVL*IEEFPT Trigger: TGTGGGAAACTCCTCAATGCAGAGTACATCAGCAAG...GCAGCCAGCTATCCTAGGAGATAGGGACAGAGCAGTCAGCCAGCCCAGCACCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
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| CDS-3UTR GCA 90 bp | TGTGGCGGGAAGGAGTGGGTCAAGCTGGCACCTGGCCCTAAACTACAGGCAAGACTTGCTGATGTACTCTaGATTGAGGAGTTTCCCACA | + |
|
Preference number: 4 (lower is better) Translates to: CGGKEWVKLAPGPKLQARLADVL*IEEFPT Trigger: TGTGGGAAACTCCTCAATGCAGAGTACATCAGCAAG...TCTTGCCTGTAGTTTAGGGCCAGGTGCCAGCTTGACCCACTCCTTCCCGCCACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
||
| CDS-3UTR GCA 90 bp | GAAACCTTTATTCTAGGGATTTGGCCATCAGGGGGCGCTCTTCTCTTAGCGACTCAGATGGAGGAGCCTTaGAGGTACATCTCCTCGCCC | + |
|
Preference number: 4 (lower is better) Translates to: ETFILGIWPSGGALLLATQMEEP*RYISSP Trigger: GGGCGAGGAGATGTACCTGCAAGGCTCCTCCATCTG...AGTCGCTAAGAGAAGAGCGCCCCCTGATGGCCAAATCCCTAGAATAAAGGTTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
||
| CDS-3UTR GCA 90 bp | TCCTCACGCTCCGAGAAGTCTCACACTTACCATTCCTGCTGTGTCAGAGTCTGCTGTCCTGGTCAAAGCTaGTGTCCTCCACGTCCAATC | + |
|
Preference number: 4 (lower is better) Translates to: SSRSEKSHTYHSCCVRVCCPGQS*CPPRPI Trigger: GATTGGACGTGGAGGACAGCAGCTTTGACCAGGACA...GCAGACTCTGACACAGCAGGAATGGTAAGTGTGAGACTTCTCGGAGCGTGAGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
||
| CDS-3UTR GCA 90 bp | ACCATTCCTGCTGTGTCAGAGTCTGCCCCTGACAAGTCTTTCACTCACGTCCCATGTCCTGGTCAAAGCTaGTGTCCTCCACGTCCAATC | + |
|
Preference number: 4 (lower is better) Translates to: TIPAVSESAPDKSFTHVPCPGQS*CPPRPI Trigger: GATTGGACGTGGAGGACAGCAGCTTTGACCAGGACA...TGGGACGTGAGTGAAAGACTTGTCAGGGGCAGACTCTGACACAGCAGGAATGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
||
| CDS-3UTR GCA 90 bp | ACGCTCCGAGAAGTCTCACACTTACCATTCCTGCTGTGTCAGAGTCTGCCCCTGAGGTTGTCTTCTTCCTaGTGTCCTGGTCAAAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: TLREVSHLPFLLCQSLPLRLSSS*CPGQSC Trigger: GCAGCTTTGACCAGGACAGCAGGAAGAAGACAACCT...CAGGGGCAGACTCTGACACAGCAGGAATGGTAAGTGTGAGACTTCTCGGAGCGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
||
| CDS-3UTR GCA 90 bp | CTGTGTCAGAGTCTGCCCCTGACAAGTCTTTCACTCACGTCCCAGACACTCTGTGTAGAGGCTGTCCCCTaGCATTCTTTGGAGAGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: LCQSLPLTSLSLTSQTLCVEAVP*HSLERF Trigger: GAACCTCTCCAAAGAATGGCAGGGGACAGCCTCTAC...ACAGAGTGTCTGGGACGTGAGTGAAAGACTTGTCAGGGGCAGACTCTGACACAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
||
| CDS-3UTR GCA 90 bp | TGTGGCGGGAAGGAGTGGGTCAAGCTGGCACCTGGCCCTAAACTACAGGCAAGAGGTCAAACTCCTCGATaGTCATCCCAAACACTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: CGGKEWVKLAPGPKLQARGQTPR*SSQTLL Trigger: AAGAAGTGTTTGGGATGAGCATCGAGGAGTTTGACC...TCTTGCCTGTAGTTTAGGGCCAGGTGCCAGCTTGACCCACTCCTTCCCGCCACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 |
||
| CDS-3UTR GCA 90 bp | GCTGTGTCAGAGTCTGCCCCTGACAAGTCTTTCACTCACGTCCCAGACACTCTGCAGAGCTGTGCATCTTaGTCTTGTCTTCAGTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: AVSESAPDKSFTHVPDTLQSCAS*SCLQSW Trigger: CCAGGACTGAAGACAAGAGCAAGATGCACAGCTCTG...CAGAGTGTCTGGGACGTGAGTGAAAGACTTGTCAGGGGCAGACTCTGACACAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101280.10 |
||
| CDS-3UTR GCA 90 bp | TCGCAGACTTTGGCCTGGCTCCCCTGCCTCAGTCTGCAAGGCTACTTGGTACCTCTGCAAACAGAGCTGTaGATCTTGCTCTTGTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: SQTLAWLPCLSLQGYLVPLQTEL*ILLLSS Trigger: TGAAGACAAGAGCAAGATGCACAGCTCTGTTTGCAG...AGGTACCAAGTAGCCTTGCAGACTGAGGCAGGGGAGCCAGGCCAAAGTCTGCGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101280.10 |
||
| CDS-3UTR CCA 90 bp | GCATCCTTGCTATACAAGGGACCATGCCTGCTGGATGCTCCTCAGGGCCTGGCCACAAAGCACCTGATGTaGAAGTACTTGTTCTGCACA | + |
|
Preference number: 4 (lower is better) Translates to: ASLLYKGPCLLDAPQGLATKHLM*KYLFCT Trigger: TGTGCAGAACAAGTACTTCCACATCAGGTGCTTTGT...GGCCAGGCCCTGAGGAGCATCCAGCAGGCATGGTCCCTTGTATAGCAAGGATGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
||
| CDS-3UTR CCA 90 bp | CTGCTGAGCGAGCGAGTGAGTGTCTTTGAGGCTGTCTGTGTGACACATACAAAGGGTGGGGAACACTTCTaGCACATACACTCCTTCCCG | + |
|
Preference number: 4 (lower is better) Translates to: LLSERVSVFEAVCVTHTKGGEHF*HIHSFP Trigger: CGGGAAGGAGTGTATGTGCCAGAAGTGTTCCCCACC...CTTTGTATGTGTCACACAGACAGCCTCAAAGACACTCACTCGCTCGCTCAGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
||
| CDS-3UTR CCA 90 bp | CTACTTGGTACCTCCTCACGCTCCGAGAAGTCTCACACTTACCATTCCTGCTGTGCCCAGCAATGTGGGTaGGGAACACTTCTGGCACAT | + |
|
Preference number: 4 (lower is better) Translates to: LLGTSSRSEKSHTYHSCCAQQCG*GTLLAH Trigger: ATGTGCCAGAAGTGTTCCCCACCCACATTGCTGGGC...ACAGCAGGAATGGTAAGTGTGAGACTTCTCGGAGCGTGAGGAGGTACCAAGTAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
||
| CDS-3UTR CCA 90 bp | CTACTTGGTACCTCCTCACGCTCCGAGAAGTCTCACACTTACCATTCCTGCTGTATGCCGGATGCCAGATaGAGGAGCCTTGCAGGTACA | + |
|
Preference number: 4 (lower is better) Translates to: LLGTSSRSEKSHTYHSCCMPDAR*RSLAGT Trigger: TGTACCTGCAAGGCTCCTCCATCTGGCATCCGGCAT...ACAGCAGGAATGGTAAGTGTGAGACTTCTCGGAGCGTGAGGAGGTACCAAGTAG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
||
| CDS-3UTR CCA 90 bp | CTCACGCTCCGAGAAGTCTCACACTTACCATTCCTGCTGTGTCAGAGTCTGCCCCTGACTGTCCAGGTCTaGAGAGTTAGTTCTGGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: LTLREVSHLPFLLCQSLPLTVQV*RVSSGV Trigger: GACACCAGAACTAACTCTCCAGACCTGGACAGTCAG...GGGCAGACTCTGACACAGCAGGAATGGTAAGTGTGAGACTTCTCGGAGCGTGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
||
| CDS-3UTR CCA 90 bp | CCTGCTGTGTCAGAGTCTGCCCCTGACAAGTCTTTCACTCACGTCCCAGACACTCTGACTGTCCAGGTCTaGAGAGTTAGTTCTGGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: PAVSESAPDKSFTHVPDTLTVQV*RVSSGV Trigger: GACACCAGAACTAACTCTCCAGACCTGGACAGTCAG...AGTGTCTGGGACGTGAGTGAAAGACTTGTCAGGGGCAGACTCTGACACAGCAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
||
| CDS-3UTR CCA 90 bp | CCTGCTGTGTCAGAGTCTGCCCCTGACAAGTCTTTCACTCACGTCCCAGACACTTCCGGTCCACGTCTTTaGGCAGTTTCACACGAATTC | + |
|
Preference number: 4 (lower is better) Translates to: PAVSESAPDKSFTHVPDTSGPRL*AVSHEF Trigger: GAATTCGTGTGAAACTGCCCAAAGACGTGGACCGGA...AGTGTCTGGGACGTGAGTGAAAGACTTGTCAGGGGCAGACTCTGACACAGCAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 |
||
| 3UTR CAA 72 bp | ACTAGGCCACAGTGGGGAAACCTTTATTCTAGGGATTaGGCCATCAGGGGGCGCTCTTCTCTTAGCGACTTG | + |
|
Preference number: 4 (lower is better) Translates to: TRPQWGNLYSRD*AIRGRSSLSDL Trigger: CAAGTCGCTAAGAGAAGAGCGCCCCCTGATGGCCAAATCCCTAGAATAAAGGTTTCCCCACTGTGGCCTAGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000054598.12 ENSMUST00000114206.9 |
||
| 3UTR CAA 72 bp | GATAGGTGTCTCTCCAGCCGTGTCCGGTCCACGTCTTaGGGCAGTTTCACACGAATTCGGTTTGTTACGATG | + |
|
Preference number: 4 (lower is better) Translates to: DRCLSSRVRSTS*GSFTRIRFVTM Trigger: CATCGTAACAAACCGAATTCGTGTGAAACTGCCCAAAGACGTGGACCGGACACGGCTGGAGAGACACCTATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114210.9 |
||
| CDS-3UTR TCA 90 bp | CTGAGCGAGCGAGTGAGTGTCTTTGAGGCTGTCTGTGTGACACATACAAAGGAGCACAAGTCTTGCACTTaGAGCATCCCAGGTGCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: LSERVSVFEAVCVTHTKEHKSCT*SIPGAS Trigger: ACTGGCACCTGGGATGCTTCAAGTGCAAGACTTGTG...CTCCTTTGTATGTGTCACACAGACAGCCTCAAAGACACTCACTCGCTCGCTCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
||
| CDS-3UTR TCA 90 bp | TACATTTCACATGTATTTACAAACGGCACTGCTGAGCGAGCGAGTGAGTGTCTTTGTAGTGTCCGAGGCTaGCTGAGCCGGCAGAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: YISHVFTNGTAERASECLCSVRG*LSRQSW Trigger: CCAGCTCTGCCGGCTCAGTCAGCCTCGGACACTACA...AAGACACTCACTCGCTCGCTCAGCAGTGCCGTTTGTAAATACATGTGAAATGTA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
||
| CDS-3UTR GCA 90 bp | CTGAGCGAGCGAGTGAGTGTCTTTGAGGCTGTCTGTGTGACACATACAAAGGAGGCAGCACCTCTCCCTTaGACACATTCCCACAGGTAT | + |
|
Preference number: 4 (lower is better) Translates to: LSERVSVFEAVCVTHTKEAAPLP*THSHRY Trigger: ATACCTGTGGGAATGTGTGCAAGGGAGAGGTGCTGC...CTCCTTTGTATGTGTCACACAGACAGCCTCAAAGACACTCACTCGCTCGCTCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
||
| CDS-3UTR GCA 90 bp | TCAAACTCCTCGATGCTCATCCCAAACACTTCTTGGAACTCCTCAGGTGATAGGTGTCGACATGCCGGATaGCAGATGGAGGAGCCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: SNSSMLIPNTSWNSSGDRCRHAG*QMEEPC Trigger: GCAAGGCTCCTCCATCTGGCATCCGGCATGTCGACA...CCTATCACCTGAGGAGTTCCAAGAAGTGTTTGGGATGAGCATCGAGGAGTTTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114210.9 |
||
| CDS-3UTR GCA 90 bp | TCCTCACGCTCCGAGAAGTCTCACACTTACCATTCCTGCTGTGTCAGAGTCTGCAGGTTGTCTTCTTCCTaGTGTCCTGGTCAAAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: SSRSEKSHTYHSCCVRVCRLSSS*CPGQSC Trigger: GCAGCTTTGACCAGGACAGCAGGAAGAAGACAACCT...GCAGACTCTGACACAGCAGGAATGGTAAGTGTGAGACTTCTCGGAGCGTGAGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
||
| CDS-3UTR GCA 90 bp | GCAAGAGCATCCTTGCTATACAAGGGACCATGCCTGCTGGATGCTCCTCAGGGCGGTCAAACTCCTCGATaGTCATCCCAAACACTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: ARASLLYKGPCLLDAPQGGQTPR*SSQTLL Trigger: AAGAAGTGTTTGGGATGAGCATCGAGGAGTTTGACC...GCCCTGAGGAGCATCCAGCAGGCATGGTCCCTTGTATAGCAAGGATGCTCTTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 |
||
| CDS-3UTR CCA 90 bp | GACTTTGGCCTGGCTCCCCTGCCTCAGTCTGCAAGGCTACTTGGTACCTCCTCAACAAAGCACCTGATGTaGAAGTACTTGTTCTGCACA | + |
|
Preference number: 4 (lower is better) Translates to: DFGLAPLPQSARLLGTSSTKHLM*KYLFCT Trigger: TGTGCAGAACAAGTACTTCCACATCAGGTGCTTTGT...TGAGGAGGTACCAAGTAGCCTTGCAGACTGAGGCAGGGGAGCCAGGCCAAAGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
||
| CDS-3UTR CCA 90 bp | CTCACGCTCCGAGAAGTCTCACACTTACCATTCCTGCTGTGTCAGAGTCTGCCCAAAGCCACCAGGGCCTaGCCATTCTTGATTTCTAAG | + |
|
Preference number: 4 (lower is better) Translates to: LTLREVSHLPFLLCQSLPKATRA*PFLISK Trigger: CTTAGAAATCAAGAATGGCCAGGCCCTGGTGGCTTT...GGGCAGACTCTGACACAGCAGGAATGGTAAGTGTGAGACTTCTCGGAGCGTGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
||
| CDS-3UTR CCA 90 bp | ACGCTCCGAGAAGTCTCACACTTACCATTCCTGCTGTGTCAGAGTCTGCCCCTGAGATCGCTTTGTTTTTaGGAAGAGCAGCCAAGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: TLREVSHLPFLLCQSLPLRSLCF*EEQPSP Trigger: GGGACTTGGCTGCTCTTCCCAAAAACAAAGCGATCT...CAGGGGCAGACTCTGACACAGCAGGAATGGTAAGTGTGAGACTTCTCGGAGCGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
||
| CDS-3UTR CCA 90 bp | TCCTCACGCTCCGAGAAGTCTCACACTTACCATTCCTGCTGTGTCAGAGTCTGCCTGACTGTCCAGGTCTaGAGAGTTAGTTCTGGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: SSRSEKSHTYHSCCVRVCLTVQV*RVSSGV Trigger: GACACCAGAACTAACTCTCCAGACCTGGACAGTCAG...GCAGACTCTGACACAGCAGGAATGGTAAGTGTGAGACTTCTCGGAGCGTGAGGA 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
||
| CDS-3UTR CCA 90 bp | TGTGGCGGGAAGGAGTGGGTCAAGCTGGCACCTGGCCCTAAACTACAGGCAAGAGAAGAGTGTCAGGTTTaGAATAAGGAAAGCGTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: CGGKEWVKLAPGPKLQAREECQV*NKESVS Trigger: ACTCACGCTTTCCTTATTCCAAACCTGACACTCTTC...TCTTGCCTGTAGTTTAGGGCCAGGTGCCAGCTTGACCCACTCCTTCCCGCCACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054598.12 |
||
| CDS-3UTR CCA 90 bp | TCCTCACGCTCCGAGAAGTCTCACACTTACCATTCCTGCTGTGTCAGAGTCTGCTCCGGTCCACGTCTTTaGGCAGTTTCACACGAATTC | + |
|
Preference number: 4 (lower is better) Translates to: SSRSEKSHTYHSCCVRVCSGPRL*AVSHEF Trigger: GAATTCGTGTGAAACTGCCCAAAGACGTGGACCGGA...GCAGACTCTGACACAGCAGGAATGGTAAGTGTGAGACTTCTCGGAGCGTGAGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 |
||
| CDS-3UTR CCA 90 bp | CTGTGTCAGAGTCTGCCCCTGACAAGTCTTTCACTCACGTCCCAGACACTCTGTTCTCCGAAGAAGTCCTaGTTTCCTGTAAGGCACAGG | + |
|
Preference number: 4 (lower is better) Translates to: LCQSLPLTSLSLTSQTLCSPKKS*FPVRHR Trigger: CCTGTGCCTTACAGGAAACCAGGACTTCTTCGGAGA...ACAGAGTGTCTGGGACGTGAGTGAAAGACTTGTCAGGGGCAGACTCTGACACAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101280.10 |
||
| CDS-3UTR TCA 90 bp | CTCACGCTCCGAGAAGTCTCACACTTACCATTCCTGCTGTGTCAGAGTCTGCCCTGCACACAAAGCACCTaGTGTGGAAGTACTTGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LTLREVSHLPFLLCQSLPCTQST*CGSTCS Trigger: AGAACAAGTACTTCCACATCAGGTGCTTTGTGTGCA...GGGCAGACTCTGACACAGCAGGAATGGTAAGTGTGAGACTTCTCGGAGCGTGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
||
| CDS-3UTR TCA 90 bp | ACGCTCCGAGAAGTCTCACACTTACCATTCCTGCTGTGTCAGAGTCTGCCCCTGTGCACACAAAGCACCTaGTGTGGAAGTACTTGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: TLREVSHLPFLLCQSLPLCTQST*CGSTCS Trigger: AGAACAAGTACTTCCACATCAGGTGCTTTGTGTGCA...CAGGGGCAGACTCTGACACAGCAGGAATGGTAAGTGTGAGACTTCTCGGAGCGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
||
| CDS-3UTR GCA 90 bp | CTCACGCTCCGAGAAGTCTCACACTTACCATTCCTGCTGTGTCAGAGTCTGCCCCTTGCTGATGTACTCTaGATTGAGGAGTTTCCCACA | + |
|
Preference number: 4 (lower is better) Translates to: LTLREVSHLPFLLCQSLPLADVL*IEEFPT Trigger: TGTGGGAAACTCCTCAATGCAGAGTACATCAGCAAG...GGGCAGACTCTGACACAGCAGGAATGGTAAGTGTGAGACTTCTCGGAGCGTGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
||
| CDS-3UTR GCA 90 bp | GGAGATGGATACATTTCACATGTATTTACAAACGGCACTGCTGAGCGAGCGAGTCAGATGGAGGAGCCTTaGAGGTACATCTCCTCGCCC | + |
|
Preference number: 4 (lower is better) Translates to: GDGYISHVFTNGTAERASQMEEP*RYISSP Trigger: GGGCGAGGAGATGTACCTGCAAGGCTCCTCCATCTG...ACTCGCTCGCTCAGCAGTGCCGTTTGTAAATACATGTGAAATGTATCCATCTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
||
| CDS-3UTR GCA 90 bp | GTCTCACACTTACCATTCCTGCTGTGTCAGAGTCTGCCCCTGACAAGTCTTTCAGTAGAGGCTGTCCCCTaGCATTCTTTGGAGAGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: VSHLPFLLCQSLPLTSLSVEAVP*HSLERF Trigger: GAACCTCTCCAAAGAATGGCAGGGGACAGCCTCTAC...TGAAAGACTTGTCAGGGGCAGACTCTGACACAGCAGGAATGGTAAGTGTGAGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
||
| CDS-3UTR GCA 90 bp | GCTGTGTCAGAGTCTGCCCCTGACAAGTCTTTCACTCACGTCCCAGACACTCTGGGTCAAACTCCTCGATaGTCATCCCAAACACTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: AVSESAPDKSFTHVPDTLGQTPR*SSQTLL Trigger: AAGAAGTGTTTGGGATGAGCATCGAGGAGTTTGACC...CAGAGTGTCTGGGACGTGAGTGAAAGACTTGTCAGGGGCAGACTCTGACACAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 |
||
| CDS-3UTR CCA 90 bp | GGAGATGGATACATTTCACATGTATTTACAAACGGCACTGCTGAGCGAGCGAGTCCCTCTGAGAACATCTaGCCGCACCTGACGCATAGC | + |
|
Preference number: 4 (lower is better) Translates to: GDGYISHVFTNGTAERASPSENI*PHLTHS Trigger: GCTATGCGTCAGGTGCGGCCAGATGTTCTCAGAGGG...ACTCGCTCGCTCAGCAGTGCCGTTTGTAAATACATGTGAAATGTATCCATCTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
||
| CDS-3UTR CCA 90 bp | ACCATTCCTGCTGTGTCAGAGTCTGCCCCTGACAAGTCTTTCACTCACGTCCCAAGATCGCTTTGTTTTTaGGAAGAGCAGCCAAGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: TIPAVSESAPDKSFTHVPRSLCF*EEQPSP Trigger: GGGACTTGGCTGCTCTTCCCAAAAACAAAGCGATCT...TGGGACGTGAGTGAAAGACTTGTCAGGGGCAGACTCTGACACAGCAGGAATGGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
||
| CDS-3UTR CCA 90 bp | TCAGGCTGGCCTCAAACTCACAGCAATCTTTCTGCCATCCAAATGTTAGGGTTACTTTGGAGAGGTTCCTaGTCAGTCCCGCTGCTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: SGWPQTHSNLSAIQMLGLLWRGS*SVPLLR Trigger: CCTCAGCAGCGGGACTGACCAGGAACCTCTCCAAAG...TAACCCTAACATTTGGATGGCAGAAAGATTGCTGTGAGTTTGAGGCCAGCCTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125378.2 |
||
| CDS-3UTR CCA 90 bp | AGCTCAGGCTGGCCTCAAACTCACAGCAATCTTTCTGCCATCCAAATGTTAGGGTCCCCTGCCATTCTTTaGAGAGGTTCCTGGTCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: SSGWPQTHSNLSAIQMLGSPAIL*RGSWSV Trigger: GACTGACCAGGAACCTCTCCAAAGAATGGCAGGGGA...CCCTAACATTTGGATGGCAGAAAGATTGCTGTGAGTTTGAGGCCAGCCTGAGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125378.2 |
||
| CDS-3UTR CCA 90 bp | CTACTTGGTACCTCCTCACGCTCCGAGAAGTCTCACACTTACCATTCCTGCTGTTCCGGTCCACGTCTTTaGGCAGTTTCACACGAATTC | + |
|
Preference number: 4 (lower is better) Translates to: LLGTSSRSEKSHTYHSCCSGPRL*AVSHEF Trigger: GAATTCGTGTGAAACTGCCCAAAGACGTGGACCGGA...ACAGCAGGAATGGTAAGTGTGAGACTTCTCGGAGCGTGAGGAGGTACCAAGTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 |
||
| CDS-3UTR CCA 90 bp | CTGAGCGAGCGAGTGAGTGTCTTTGAGGCTGTCTGTGTGACACATACAAAGGAGGGGACAGACAGCTACTaGTACCAACACTCACAGTAC | + |
|
Preference number: 4 (lower is better) Translates to: LSERVSVFEAVCVTHTKEGTDSY*YQHSQY Trigger: GTACTGTGAGTGTTGGTACCAGTAGCTGTCTGTCCC...CTCCTTTGTATGTGTCACACAGACAGCCTCAAAGACACTCACTCGCTCGCTCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
||
| CDS-3UTR TCA 90 bp | ACCATTCCTGCTGTGTCAGAGTCTGCCCCTGACAAGTCTTTCACTCACGTCCCATGCACACAAAGCACCTaGTGTGGAAGTACTTGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: TIPAVSESAPDKSFTHVPCTQST*CGSTCS Trigger: AGAACAAGTACTTCCACATCAGGTGCTTTGTGTGCA...TGGGACGTGAGTGAAAGACTTGTCAGGGGCAGACTCTGACACAGCAGGAATGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
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| CDS-3UTR TCA 90 bp | TCAGGCTGGCCTCAAACTCACAGCAATCTTTCTGCCATCCAAATGTTAGGGTTATGTCTGCATCCCCCTTaGGAAGCAGCCAGGTTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: SGWPQTHSNLSAIQMLGLCLHPP*EAARLS Trigger: AGACAACCTGGCTGCTTCTCAAGGGGGATGCAGACA...TAACCCTAACATTTGGATGGCAGAAAGATTGCTGTGAGTTTGAGGCCAGCCTGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000125378.2 |
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| CDS-3UTR GCA 90 bp | ACCATTCCTGCTGTGTCAGAGTCTGCCCCTGACAAGTCTTTCACTCACGTCCCACTTGCTGATGTACTCTaGATTGAGGAGTTTCCCACA | + |
|
Preference number: 4 (lower is better) Translates to: TIPAVSESAPDKSFTHVPLADVL*IEEFPT Trigger: TGTGGGAAACTCCTCAATGCAGAGTACATCAGCAAG...TGGGACGTGAGTGAAAGACTTGTCAGGGGCAGACTCTGACACAGCAGGAATGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
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| CDS-3UTR GCA 90 bp | GTCTCACACTTACCATTCCTGCTGTGTCAGAGTCTGCCCCTGACAAGTCTTTCAAGGTTGTCTTCTTCCTaGTGTCCTGGTCAAAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: VSHLPFLLCQSLPLTSLSRLSSS*CPGQSC Trigger: GCAGCTTTGACCAGGACAGCAGGAAGAAGACAACCT...TGAAAGACTTGTCAGGGGCAGACTCTGACACAGCAGGAATGGTAAGTGTGAGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
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| CDS-3UTR GCA 90 bp | CTCACACTTACCATTCCTGCTGTGTCAGAGTCTGCCCCTGACAAGTCTTTCACTAGGTTGTCTTCTTCCTaGTGTCCTGGTCAAAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LTLTIPAVSESAPDKSFTRLSSS*CPGQSC Trigger: GCAGCTTTGACCAGGACAGCAGGAAGAAGACAACCT...AGTGAAAGACTTGTCAGGGGCAGACTCTGACACAGCAGGAATGGTAAGTGTGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
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| CDS-3UTR GCA 90 bp | AGCTCAGGCTGGCCTCAAACTCACAGCAATCTTTCTGCCATCCAAATGTTAGGGAGGTTGTCTTCTTCCTaGTGTCCTGGTCAAAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: SSGWPQTHSNLSAIQMLGRLSSS*CPGQSC Trigger: GCAGCTTTGACCAGGACAGCAGGAAGAAGACAACCT...CCCTAACATTTGGATGGCAGAAAGATTGCTGTGAGTTTGAGGCCAGCCTGAGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125378.2 |
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| CDS-3UTR GCA 90 bp | CCGAGAAGTCTCACACTTACCATTCCTGCTGTGTCAGAGTCTGCCCCTGACAAGGGTCAAACTCCTCGATaGTCATCCCAAACACTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: PRSLTLTIPAVSESAPDKGQTPR*SSQTLL Trigger: AAGAAGTGTTTGGGATGAGCATCGAGGAGTTTGACC...CTTGTCAGGGGCAGACTCTGACACAGCAGGAATGGTAAGTGTGAGACTTCTCGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 |
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| CDS-3UTR CCA 90 bp | GGAGATGGATACATTTCACATGTATTTACAAACGGCACTGCTGAGCGAGCGAGTGCCCAGCAATGTGGGTaGGGAACACTTCTGGCACAT | + |
|
Preference number: 4 (lower is better) Translates to: GDGYISHVFTNGTAERASAQQCG*GTLLAH Trigger: ATGTGCCAGAAGTGTTCCCCACCCACATTGCTGGGC...ACTCGCTCGCTCAGCAGTGCCGTTTGTAAATACATGTGAAATGTATCCATCTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
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| CDS-3UTR CCA 90 bp | GGAGATGGATACATTTCACATGTATTTACAAACGGCACTGCTGAGCGAGCGAGTTGTTGCCCAGCAATGTaGGTGGGGAACACTTCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: GDGYISHVFTNGTAERASCCPAM*VGNTSG Trigger: GCCAGAAGTGTTCCCCACCCACATTGCTGGGCAACA...ACTCGCTCGCTCAGCAGTGCCGTTTGTAAATACATGTGAAATGTATCCATCTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
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| CDS-3UTR CCA 90 bp | CTCACACTTACCATTCCTGCTGTGTCAGAGTCTGCCCCTGACAAGTCTTTCACTCTGACTGTCCAGGTCTaGAGAGTTAGTTCTGGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: LTLTIPAVSESAPDKSFTLTVQV*RVSSGV Trigger: GACACCAGAACTAACTCTCCAGACCTGGACAGTCAG...AGTGAAAGACTTGTCAGGGGCAGACTCTGACACAGCAGGAATGGTAAGTGTGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
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| CDS-3UTR CCA 90 bp | AGCTCAGGCTGGCCTCAAACTCACAGCAATCTTTCTGCCATCCAAATGTTAGGGCTGACTGTCCAGGTCTaGAGAGTTAGTTCTGGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: SSGWPQTHSNLSAIQMLGLTVQV*RVSSGV Trigger: GACACCAGAACTAACTCTCCAGACCTGGACAGTCAG...CCCTAACATTTGGATGGCAGAAAGATTGCTGTGAGTTTGAGGCCAGCCTGAGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125378.2 |
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| CDS-3UTR CCA 90 bp | CTCACACTTACCATTCCTGCTGTGTCAGAGTCTGCCCCTGACAAGTCTTTCACTTCCGGTCCACGTCTTTaGGCAGTTTCACACGAATTC | + |
|
Preference number: 4 (lower is better) Translates to: LTLTIPAVSESAPDKSFTSGPRL*AVSHEF Trigger: GAATTCGTGTGAAACTGCCCAAAGACGTGGACCGGA...AGTGAAAGACTTGTCAGGGGCAGACTCTGACACAGCAGGAATGGTAAGTGTGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 |
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| CDS-3UTR CCA 90 bp | TGGTACCTCCTCACGCTCCGAGAAGTCTCACACTTACCATTCCTGCTGTGTCAGATCCCAAACACTTCTTaGAACTCCTCAGGTGATAGG | + |
|
Preference number: 4 (lower is better) Translates to: WYLLTLREVSHLPFLLCQIPNTS*NSSGDR Trigger: CCTATCACCTGAGGAGTTCCAAGAAGTGTTTGGGAT...CTGACACAGCAGGAATGGTAAGTGTGAGACTTCTCGGAGCGTGAGGAGGTACCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 |
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| CDS-3UTR CCA 90 bp | ATGGCTGTGTCACGTGACAGCATGCTTCCTGGGCATGCGTGTTTTATGTGGTGGATCCCAAACACTTCTTaGAACTCCTCAGGTGATAGG | + |
|
Preference number: 4 (lower is better) Translates to: MAVSRDSMLPGHACFMWWIPNTS*NSSGDR Trigger: CCTATCACCTGAGGAGTTCCAAGAAGTGTTTGGGAT...CCACCACATAAAACACGCATGCCCAGGAAGCATGCTGTCACGTGACACAGCCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054598.12 ENSMUST00000114206.9 |
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| CDS-3UTR GCA 90 bp | TCAGGCTGGCCTCAAACTCACAGCAATCTTTCTGCCATCCAAATGTTAGGGTTATGTCCTGGTCAAAGCTaGTGTCCTCCACGTCCAATC | + |
|
Preference number: 4 (lower is better) Translates to: SGWPQTHSNLSAIQMLGLCPGQS*CPPRPI Trigger: GATTGGACGTGGAGGACAGCAGCTTTGACCAGGACA...TAACCCTAACATTTGGATGGCAGAAAGATTGCTGTGAGTTTGAGGCCAGCCTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125378.2 |
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| CDS-3UTR GCA 90 bp | TCAAACTCCTCGATGCTCATCCCAAACACTTCTTGGAACTCCTCAGGTGATAGGAGGTTGTCTTCTTCCTaGTGTCCTGGTCAAAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: SNSSMLIPNTSWNSSGDRRLSSS*CPGQSC Trigger: GCAGCTTTGACCAGGACAGCAGGAAGAAGACAACCT...CCTATCACCTGAGGAGTTCCAAGAAGTGTTTGGGATGAGCATCGAGGAGTTTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114210.9 |
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| CDS-3UTR GCA 90 bp | TCAGGCTGGCCTCAAACTCACAGCAATCTTTCTGCCATCCAAATGTTAGGGTTAGTAGAGGCTGTCCCCTaGCATTCTTTGGAGAGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: SGWPQTHSNLSAIQMLGLVEAVP*HSLERF Trigger: GAACCTCTCCAAAGAATGGCAGGGGACAGCCTCTAC...TAACCCTAACATTTGGATGGCAGAAAGATTGCTGTGAGTTTGAGGCCAGCCTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125378.2 |
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| CDS-3UTR CCA 90 bp | CCGAGAAGTCTCACACTTACCATTCCTGCTGTGTCAGAGTCTGCCCCTGACAAGACAAAGCACCTGATGTaGAAGTACTTGTTCTGCACA | + |
|
Preference number: 4 (lower is better) Translates to: PRSLTLTIPAVSESAPDKTKHLM*KYLFCT Trigger: TGTGCAGAACAAGTACTTCCACATCAGGTGCTTTGT...CTTGTCAGGGGCAGACTCTGACACAGCAGGAATGGTAAGTGTGAGACTTCTCGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
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| CDS-3UTR CCA 90 bp | GTCTCACACTTACCATTCCTGCTGTGTCAGAGTCTGCCCCTGACAAGTCTTTCAAGATCGCTTTGTTTTTaGGAAGAGCAGCCAAGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: VSHLPFLLCQSLPLTSLSRSLCF*EEQPSP Trigger: GGGACTTGGCTGCTCTTCCCAAAAACAAAGCGATCT...TGAAAGACTTGTCAGGGGCAGACTCTGACACAGCAGGAATGGTAAGTGTGAGAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
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| CDS-3UTR CCA 90 bp | GGAGATGGATACATTTCACATGTATTTACAAACGGCACTGCTGAGCGAGCGAGTTCCCCTGCCATTCTTTaGAGAGGTTCCTGGTCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: GDGYISHVFTNGTAERASSPAIL*RGSWSV Trigger: GACTGACCAGGAACCTCTCCAAAGAATGGCAGGGGA...ACTCGCTCGCTCAGCAGTGCCGTTTGTAAATACATGTGAAATGTATCCATCTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
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| CDS-3UTR CCA 90 bp | CTGAGCGAGCGAGTGAGTGTCTTTGAGGCTGTCTGTGTGACACATACAAAGGAGATCCCAAACACTTCTTaGAACTCCTCAGGTGATAGG | + |
|
Preference number: 4 (lower is better) Translates to: LSERVSVFEAVCVTHTKEIPNTS*NSSGDR Trigger: CCTATCACCTGAGGAGTTCCAAGAAGTGTTTGGGAT...CTCCTTTGTATGTGTCACACAGACAGCCTCAAAGACACTCACTCGCTCGCTCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114206.9 |
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| CDS-3UTR TCA 90 bp | GTCTCACACTTACCATTCCTGCTGTGTCAGAGTCTGCCCCTGACAAGTCTTTCATGCACACAAAGCACCTaGTGTGGAAGTACTTGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: VSHLPFLLCQSLPLTSLSCTQST*CGSTCS Trigger: AGAACAAGTACTTCCACATCAGGTGCTTTGTGTGCA...TGAAAGACTTGTCAGGGGCAGACTCTGACACAGCAGGAATGGTAAGTGTGAGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
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| CDS-3UTR TCA 90 bp | GAAACCTTTATTCTAGGGATTTGGCCATCAGGGGGCGCTCTTCTCTTAGCGACTTGCACACAAAGCACCTaGTGTGGAAGTACTTGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: ETFILGIWPSGGALLLATCTQST*CGSTCS Trigger: AGAACAAGTACTTCCACATCAGGTGCTTTGTGTGCA...AGTCGCTAAGAGAAGAGCGCCCCCTGATGGCCAAATCCCTAGAATAAAGGTTTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
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| CDS-3UTR CCA 90 bp | TCAGGCTGGCCTCAAACTCACAGCAATCTTTCTGCCATCCAAATGTTAGGGTTAGGGACAGACAGCTACTaGTACCAACACTCACAGTAC | + |
|
Preference number: 4 (lower is better) Translates to: SGWPQTHSNLSAIQMLGLGTDSY*YQHSQY Trigger: GTACTGTGAGTGTTGGTACCAGTAGCTGTCTGTCCC...TAACCCTAACATTTGGATGGCAGAAAGATTGCTGTGAGTTTGAGGCCAGCCTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125378.2 |
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| CDS-3UTR CCA 90 bp | GAAACCTTTATTCTAGGGATTTGGCCATCAGGGGGCGCTCTTCTCTTAGCGACTACAAAGCACCTGATGTaGAAGTACTTGTTCTGCACA | + |
|
Preference number: 4 (lower is better) Translates to: ETFILGIWPSGGALLLATTKHLM*KYLFCT Trigger: TGTGCAGAACAAGTACTTCCACATCAGGTGCTTTGT...AGTCGCTAAGAGAAGAGCGCCCCCTGATGGCCAAATCCCTAGAATAAAGGTTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
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| CDS-3UTR CCA 90 bp | TACATTTCACATGTATTTACAAACGGCACTGCTGAGCGAGCGAGTGAGTGTCTTAAAGCCACCAGGGCCTaGCCATTCTTGATTTCTAAG | + |
|
Preference number: 4 (lower is better) Translates to: YISHVFTNGTAERASECLKATRA*PFLISK Trigger: CTTAGAAATCAAGAATGGCCAGGCCCTGGTGGCTTT...AAGACACTCACTCGCTCGCTCAGCAGTGCCGTTTGTAAATACATGTGAAATGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
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| CDS CCA 90 bp | GCTGCTGTCCTCCACGTCCAATCGCCTGGCAGCTGCAGCCTGCGGTaGGCTCAGCCCTGCCCATCTCTTGGAGCGCCCTGCCTCCTGCAC | + |
|
Preference number: 5 (lower is better) Translates to: AAVLHVQSPGSCSLR*AQPCPSLGAPCLLH Trigger: GTGCAGGAGGCAGGGCGCTCCAAGAGATGGGCAGGGCTGAGCCCACCGCAGGCTGCAGCTGCCAGGCGATTGGACGTGGAGGACAGCAGC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151322.8 |
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| CDS-3UTR CAA 90 bp | CCCCAGTGCCTAGCACAGGTGTGGGCACACCAGGTGCCCCGGAAAGGTGCTGGGGGGGTGACCGTGAGGTaGGGGTGTAGTGTCCGAGGC | + |
|
Preference number: 5 (lower is better) Translates to: PQCLAQVWAHQVPRKGAGGVTVR*GCSVRG Trigger: GCCTCGGACACTACACCCCAACCTCACGGTCACCCC...CCCAGCACCTTTCCGGGGCACCTGGTGTGCCCACACCTGTGCTAGGCACTGGGG 68% GC, longest homopolymer 7 nt, total homopolymer stretches 19 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
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| CDS-3UTR CAA 90 bp | GAGGAGCGCGGAGGACTGGAAGCACAGAGGCCTGCACGGTGGGAGTGGGGTGGGCCCCCTCAGTCGGCGTaGGTGAGAGCAACTGAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: EERGGLEAQRPARWEWGGPPQSA*VRATEV Trigger: CACCTCAGTTGCTCTCACCAACGCCGACTGAGGGGG...CCCACCCCACTCCCACCGTGCAGGCCTCTGTGCTTCCAGTCCTCCGCGCTCCTC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114206.9 |
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| CDS GCA 90 bp | GTCCTGGTCAAAGCTGCTGTCCTCCACGTCCAATCGCCTGGCAGCTaGAGCCTGCGGTGGGCTCAGCCCTGCCCATCTCTTGGAGCGCCC | + |
|
Preference number: 5 (lower is better) Translates to: VLVKAAVLHVQSPGS*SLRWAQPCPSLGAP Trigger: GGGCGCTCCAAGAGATGGGCAGGGCTGAGCCCACCGCAGGCTGCAGCTGCCAGGCGATTGGACGTGGAGGACAGCAGCTTTGACCAGGAC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151322.8 |
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| CDS CCA 90 bp | GCGTGCCCCAGCTGGCATCCGGGTCTGCTCCACAAGGGGCCAGGTTaGCATTCCGGAGGTCCAGGCCATCCTTCCTGGGTCCTGGAAGAG | + |
|
Preference number: 5 (lower is better) Translates to: ACPSWHPGLLHKGPG*HSGGPGHPSWVLEE Trigger: CTCTTCCAGGACCCAGGAAGGATGGCCTGGACCTCCGGAATGCCAACCTGGCCCCTTGTGGAGCAGACCCGGATGCCAGCTGGGGCACGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000054598.12 ENSMUST00000114203.8 ENSMUST00000129347.8 |
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| CDS-3UTR CAA 90 bp | CCCCAGTGCCTAGCACAGGTGTGGGCACACCAGGTGCCCCGGAAAGGTGCTGGGCCAGATGGAGGAGCCTaGCAGGTACATCTCCTCGCC | + |
|
Preference number: 5 (lower is better) Translates to: PQCLAQVWAHQVPRKGAGPDGGA*QVHLLA Trigger: GGCGAGGAGATGTACCTGCAAGGCTCCTCCATCTGG...CCCAGCACCTTTCCGGGGCACCTGGTGTGCCCACACCTGTGCTAGGCACTGGGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
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| CDS CCA 90 bp | ACGTGCTGGAGGCAGGCACGGAGACAATGCTCTCCGAAGAAGTCCTaGTTTCCTGTAAGGCACAGGGCAGGGTGCCCGGGCAGGGCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: TCWRQARRQCSPKKS*FPVRHRAGCPGRAG Trigger: GCCAGCCCTGCCCGGGCACCCTGCCCTGTGCCTTACAGGAAACCAGGACTTCTTCGGAGAGCATTGTCTCCGTGCCTGCCTCCAGCACGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000101280.10 ENSMUST00000129347.8 ENSMUST00000130233.8 |
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| CDS CCA 90 bp | TCCTGCTGTCCTGGTCAAAGCTGCTGTCCTCCACGTCCAATCGCCTaGCAGCTGCAGCCTGCGGTGGGCTCAGCCCTGCCCATCTCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: SCCPGQSCCPPRPIA*QLQPAVGSALPISW Trigger: CCAAGAGATGGGCAGGGCTGAGCCCACCGCAGGCTGCAGCTGCCAGGCGATTGGACGTGGAGGACAGCAGCTTTGACCAGGACAGCAGGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151322.8 |
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| CDS GCA 90 bp | GCAGGGTGCCCGGGCAGGGCTGGCTGCAAACAGAGCTGTGCATCTTaGTCTTGTCTTCAGTCCTGGCTGCCTGTCGACATGCCGGATGCC | + |
|
Preference number: 5 (lower is better) Translates to: AGCPGRAGCKQSCAS*SCLQSWLPVDMPDA Trigger: GGCATCCGGCATGTCGACAGGCAGCCAGGACTGAAGACAAGAGCAAGATGCACAGCTCTGTTTGCAGCCAGCCCTGCCCGGGCACCCTGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000101280.10 ENSMUST00000129347.8 ENSMUST00000130233.8 |
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| CDS GCA 90 bp | CACGGCTCGGGGACCCTGACGTGCTGGAGGCAGGCACGGAGACAATaGTCTCCGAAGAAGTCCTGGTTTCCTGTAAGGCACAGGGCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: HGSGTLTCWRQARRQ*SPKKSWFPVRHRAG Trigger: CCCTGCCCTGTGCCTTACAGGAAACCAGGACTTCTTCGGAGAGCATTGTCTCCGTGCCTGCCTCCAGCACGTCAGGGTCCCCGAGCCGTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000101280.10 ENSMUST00000129347.8 ENSMUST00000130233.8 |
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| CDS GCA 90 bp | TGCGGTGGGCTCAGCCCTGCCCATCTCTTGGAGCGCCCTGCCTCCTaGACCACCAAGGACAAAACTGACACCAGGCCAGAGAGCTTGGAC | + |
|
Preference number: 5 (lower is better) Translates to: CGGLSPAHLLERPAS*TTKDKTDTRPESLD Trigger: GTCCAAGCTCTCTGGCCTGGTGTCAGTTTTGTCCTTGGTGGTGCAGGAGGCAGGGCGCTCCAAGAGATGGGCAGGGCTGAGCCCACCGCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151322.8 |
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| CDS-3UTR CAA 90 bp | GAGGAGCGCGGAGGACTGGAAGCACAGAGGCCTGCACGGTGGGAGTGGGGTGGGCTGATGTGGAAGTACTaGTTCTGCACACGCAGCACC | + |
|
Preference number: 5 (lower is better) Translates to: EERGGLEAQRPARWEWGGLMWKY*FCTRST Trigger: GGTGCTGCGTGTGCAGAACAAGTACTTCCACATCAG...CCCACCCCACTCCCACCGTGCAGGCCTCTGTGCTTCCAGTCCTCCGCGCTCCTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
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| CDS-3UTR CAA 90 bp | CGCAGACTTTGGCCTGGCTCCCCTGCCTCAGTCTGCAAGGCTACTTGGTACCTCGGGGTGACCGTGAGGTaGGGGTGTAGTGTCCGAGGC | + |
|
Preference number: 5 (lower is better) Translates to: RRLWPGSPASVCKATWYLGVTVR*GCSVRG Trigger: GCCTCGGACACTACACCCCAACCTCACGGTCACCCC...GAGGTACCAAGTAGCCTTGCAGACTGAGGCAGGGGAGCCAGGCCAAAGTCTGCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
||
| CDS-3UTR CAA 90 bp | CGCAGACTTTGGCCTGGCTCCCCTGCCTCAGTCTGCAAGGCTACTTGGTACCTCCCACAAGGGGCCAGGTaGGCATTCCGGAGGTCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: RRLWPGSPASVCKATWYLPQGAR*AFRRSR Trigger: CCTGGACCTCCGGAATGCCAACCTGGCCCCTTGTGG...GAGGTACCAAGTAGCCTTGCAGACTGAGGCAGGGGAGCCAGGCCAAAGTCTGCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054598.12 |
||
| CDS TCA 90 bp | CCAGGTGCCAGTGCTTGTCCAAAGCCACCAGGGCCTGGCCATTCTTaGTTTCTAAGCCACAGCCCCCACAACTCCGGAGGCCCTGGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: PGASACPKPPGPGHS*FLSHSPHNSGGPGP Trigger: TGGCCCAGGGCCTCCGGAGTTGTGGGGGCTGTGGCTTAGAAATCAAGAATGGCCAGGCCCTGGTGGCTTTGGACAAGCACTGGCACCTGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 ENSMUST00000129347.8 |
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| CDS GCA 90 bp | CCTCTCCCTTGCACACATTCCCACAGGTATTACACAGGATCGCAGTaGTGGCCGGCTTCTCCAGTGGGGCATGAGCAGCCTGGGGCTGCG | + |
|
Preference number: 5 (lower is better) Translates to: PLPCTHSHRYYTGSQ*WPASPVGHEQPGAA Trigger: CGCAGCCCCAGGCTGCTCATGCCCCACTGGAGAAGCCGGCCAGCACTGCGATCCTGTGTAATACCTGTGGGAATGTGTGCAAGGGAGAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 ENSMUST00000129347.8 |
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| CDS CCA 90 bp | TCCTGCTGTCCTGGTCAAAGCTGCTGTCCTCCACGTCCAATCGCCTaGCAGCTGGACGACTGTAGTGCTGGGGTGACCGTGAGGTTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: SCCPGQSCCPPRPIA*QLDDCSAGVTVRLG Trigger: CCCCAACCTCACGGTCACCCCAGCACTACAGTCGTCCAGCTGCCAGGCGATTGGACGTGGAGGACAGCAGCTTTGACCAGGACAGCAGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151636.8 |
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| CDS-3UTR CAA 90 bp | CCCCAGTGCCTAGCACAGGTGTGGGCACACCAGGTGCCCCGGAAAGGTGCTGGGCTGATGTGGAAGTACTaGTTCTGCACACGCAGCACC | + |
|
Preference number: 5 (lower is better) Translates to: PQCLAQVWAHQVPRKGAGLMWKY*FCTRST Trigger: GGTGCTGCGTGTGCAGAACAAGTACTTCCACATCAG...CCCAGCACCTTTCCGGGGCACCTGGTGTGCCCACACCTGTGCTAGGCACTGGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
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| CDS-3UTR CAA 90 bp | CCCCAGTGCCTAGCACAGGTGTGGGCACACCAGGTGCCCCGGAAAGGTGCTGGGTCACAGCCACACGCTTaGCACACAAAGCACCTGATG | + |
|
Preference number: 5 (lower is better) Translates to: PQCLAQVWAHQVPRKGAGSQPHA*HTKHLM Trigger: CATCAGGTGCTTTGTGTGCAAAGCGTGTGGCTGTGA...CCCAGCACCTTTCCGGGGCACCTGGTGTGCCCACACCTGTGCTAGGCACTGGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
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| CDS-3UTR CAA 90 bp | AGACTTTGGCCTGGCTCCCCTGCCTCAGTCTGCAAGGCTACTTGGTACCTCCTCGGGGTGACCGTGAGGTaGGGGTGTAGTGTCCGAGGC | + |
|
Preference number: 5 (lower is better) Translates to: RLWPGSPASVCKATWYLLGVTVR*GCSVRG Trigger: GCCTCGGACACTACACCCCAACCTCACGGTCACCCC...GAGGAGGTACCAAGTAGCCTTGCAGACTGAGGCAGGGGAGCCAGGCCAAAGTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
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| CDS TCA 90 bp | ATTTCTAAGCCACAGCCCCCACAACTCCGGAGGCCCTGGGCCACGTaGGCACTGTTGCCCAGCAATGTGGGTGGGGAACACTTCTGGCAC | + |
|
Preference number: 5 (lower is better) Translates to: ISKPQPPQLRRPWAT*ALLPSNVGGEHFWH Trigger: GTGCCAGAAGTGTTCCCCACCCACATTGCTGGGCAACAGTGCTCACGTGGCCCAGGGCCTCCGGAGTTGTGGGGGCTGTGGCTTAGAAAT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 ENSMUST00000129347.8 |
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| CDS TCA 90 bp | AGCCTGCTGGTAGGTAGAGGAAGGAGGTCTGCTGTCGGAGTGCACTaGGAGACTCGGGGTGCTACGGCCACTTTCGCTGCCTGGACGACT | + |
|
Preference number: 5 (lower is better) Translates to: SLLVGRGRRSAVGVH*ETRGATATFAAWTT Trigger: AGTCGTCCAGGCAGCGAAAGTGGCCGTAGCACCCCGAGTCTCTCAGTGCACTCCGACAGCAGACCTCCTTCCTCTACCTACCAGCAGGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054598.12 ENSMUST00000114205.8 |
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| CDS GCA 90 bp | CATCGCCAAGCTTTGCGTAGATCACACGGCTCGGGGACCCTGACGTaGTGGAGGCAGGCACGGAGACAATGCTCTCCGAAGAAGTCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: HRQALRRSHGSGTLT*WRQARRQCSPKKSW Trigger: CCAGGACTTCTTCGGAGAGCATTGTCTCCGTGCCTGCCTCCAGCACGTCAGGGTCCCCGAGCCGTGTGATCTACGCAAAGCTTGGCGATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 11 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114203.8 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 ENSMUST00000129347.8 ENSMUST00000130233.8 ENSMUST00000151322.8 ENSMUST00000151636.8 |
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| CDS GCA 90 bp | GGGATATATCTTATACTCTCGCGTGCCCCAGCTGGCATCCGGGTCTaGTCCACAAGGGGCCAGGTTGGCATTCCGGAGGTCCAGGCCATC | + |
|
Preference number: 5 (lower is better) Translates to: GIYLILSRAPAGIRV*STRGQVGIPEVQAI Trigger: GATGGCCTGGACCTCCGGAATGCCAACCTGGCCCCTTGTGGAGCAGACCCGGATGCCAGCTGGGGCACGCGAGAGTATAAGATATATCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000054598.12 ENSMUST00000114203.8 ENSMUST00000129347.8 |
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| CDS CCA 90 bp | CTCCCTTGCACACATTCCCACAGGTATTACACAGGATCGCAGTGCTaGCCGGCTTCTCCAGTGGGGCATGAGCAGCCTGGGGCTGCGACA | + |
|
Preference number: 5 (lower is better) Translates to: LPCTHSHRYYTGSQC*PASPVGHEQPGAAT Trigger: TGTCGCAGCCCCAGGCTGCTCATGCCCCACTGGAGAAGCCGGCCAGCACTGCGATCCTGTGTAATACCTGTGGGAATGTGTGCAAGGGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 ENSMUST00000129347.8 |
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| CDS CCA 90 bp | CCGGAGGCCCTGGGCCACGTGAGCACTGTTGCCCAGCAATGTGGGTaGGGAACACTTCTGGCACATACACTCCTTCCCGTTGAAGGTCAC | + |
|
Preference number: 5 (lower is better) Translates to: PEALGHVSTVAQQCG*GTLLAHTLLPVEGH Trigger: GTGACCTTCAACGGGAAGGAGTGTATGTGCCAGAAGTGTTCCCCACCCACATTGCTGGGCAACAGTGCTCACGTGGCCCAGGGCCTCCGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 ENSMUST00000129347.8 |
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| CDS-3UTR CAA 90 bp | CACTGCCCTGATGCCCAGTTGTGGCGGGAAGGAGTGGGTCAAGCTGGCACCTGGAGGGCCTGGCCATTCTaGATTTCTAAGCCACAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: HCPDAQLWREGVGQAGTWRAWPF*ISKPQP Trigger: GGGCTGTGGCTTAGAAATCAAGAATGGCCAGGCCCT...CCAGGTGCCAGCTTGACCCACTCCTTCCCGCCACAACTGGGCATCAGGGCAGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
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| CDS-3UTR CAA 90 bp | ACTGCTCTGTCCCTATCTCCTAGGATAGCTGGCTGCAACACTGCCCTGATGCCCCCCAGGTGCCAGTGCTaGTCCAAAGCCACCAGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: TALSLSPRIAGCNTALMPPRCQC*SKATRA Trigger: GGCCCTGGTGGCTTTGGACAAGCACTGGCACCTGGG...GGGCATCAGGGCAGTGTTGCAGCCAGCTATCCTAGGAGATAGGGACAGAGCAGT 61% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
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| CDS-3UTR CAA 90 bp | CCAGTTGTGGCGGGAAGGAGTGGGTCAAGCTGGCACCTGGCCCTAAACTACAGGCCAGATGGAGGAGCCTaGCAGGTACATCTCCTCGCC | + |
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Preference number: 5 (lower is better) Translates to: PVVAGRSGSSWHLALNYRPDGGA*QVHLLA Trigger: GGCGAGGAGATGTACCTGCAAGGCTCCTCCATCTGG...CCTGTAGTTTAGGGCCAGGTGCCAGCTTGACCCACTCCTTCCCGCCACAACTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
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| CDS TCA 90 bp | AGCCTGCTGGTAGGTAGAGGAAGGAGGTCTGCTGTCGGAGTGCACTaGGAGACTCGGGGTGCTACGGCCACTTTCGCTGCCTCGGAAGTA | + |
|
Preference number: 5 (lower is better) Translates to: SLLVGRGRRSAVGVH*ETRGATATFAASEV Trigger: TACTTCCGAGGCAGCGAAAGTGGCCGTAGCACCCCGAGTCTCTCAGTGCACTCCGACAGCAGACCTCCTTCCTCTACCTACCAGCAGGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114206.9 ENSMUST00000114210.9 ENSMUST00000125378.2 ENSMUST00000129347.8 |
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| CDS GCA 90 bp | TGGTTTCCTGTAAGGCACAGGGCAGGGTGCCCGGGCAGGGCTGGCTaGAAACAGAGCTGTGCATCTTGCTCTTGTCTTCAGTCCTGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: WFPVRHRAGCPGRAG*KQSCASCSCLQSWL Trigger: CAGCCAGGACTGAAGACAAGAGCAAGATGCACAGCTCTGTTTGCAGCCAGCCCTGCCCGGGCACCCTGCCCTGTGCCTTACAGGAAACCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000101280.10 ENSMUST00000129347.8 ENSMUST00000130233.8 |
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| CDS GCA 90 bp | TGCTCTCCGAAGAAGTCCTGGTTTCCTGTAAGGCACAGGGCAGGGTaGCCGGGCAGGGCTGGCTGCAAACAGAGCTGTGCATCTTGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: CSPKKSWFPVRHRAG*PGRAGCKQSCASCS Trigger: AGAGCAAGATGCACAGCTCTGTTTGCAGCCAGCCCTGCCCGGGCACCCTGCCCTGTGCCTTACAGGAAACCAGGACTTCTTCGGAGAGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000101280.10 ENSMUST00000129347.8 ENSMUST00000130233.8 |
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| CDS CCA 90 bp | CGCCAAGCTTTGCGTAGATCACACGGCTCGGGGACCCTGACGTGCTaGAGGCAGGCACGGAGACAATGCTCTCCGAAGAAGTCCTGGTTT | + |
|
Preference number: 5 (lower is better) Translates to: RQALRRSHGSGTLTC*RQARRQCSPKKSWF Trigger: AAACCAGGACTTCTTCGGAGAGCATTGTCTCCGTGCCTGCCTCCAGCACGTCAGGGTCCCCGAGCCGTGTGATCTACGCAAAGCTTGGCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 11 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114203.8 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 ENSMUST00000129347.8 ENSMUST00000130233.8 ENSMUST00000151322.8 ENSMUST00000151636.8 |
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| CDS CCA 90 bp | GTCCTGGTTTCCTGTAAGGCACAGGGCAGGGTGCCCGGGCAGGGCTaGCTGCAAACAGAGCTGTGCATCTTGCTCTTGTCTTCAGTCCTG | + |
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Preference number: 5 (lower is better) Translates to: VLVSCKAQGRVPGQG*LQTELCILLLSSVL Trigger: CAGGACTGAAGACAAGAGCAAGATGCACAGCTCTGTTTGCAGCCAGCCCTGCCCGGGCACCCTGCCCTGTGCCTTACAGGAAACCAGGAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000101280.10 ENSMUST00000129347.8 ENSMUST00000130233.8 |
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| CDS-3UTR CAA 90 bp | ACGCTCCGAGAAGTCTCACACTTACCATTCCTGCTGTGTCAGAGTCTGCCCCTGCCCAGGTGCCAGTGCTaGTCCAAAGCCACCAGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: TLREVSHLPFLLCQSLPLPRCQC*SKATRA Trigger: GGCCCTGGTGGCTTTGGACAAGCACTGGCACCTGGG...CAGGGGCAGACTCTGACACAGCAGGAATGGTAAGTGTGAGACTTCTCGGAGCGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
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| CDS-3UTR CAA 90 bp | GCTGTGTCAGAGTCTGCCCCTGACAAGTCTTTCACTCACGTCCCAGACACTCTGGGGGTGACCGTGAGGTaGGGGTGTAGTGTCCGAGGC | + |
|
Preference number: 5 (lower is better) Translates to: AVSESAPDKSFTHVPDTLGVTVR*GCSVRG Trigger: GCCTCGGACACTACACCCCAACCTCACGGTCACCCC...CAGAGTGTCTGGGACGTGAGTGAAAGACTTGTCAGGGGCAGACTCTGACACAGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
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| CDS-3UTR CAA 90 bp | GCATCCTTGCTATACAAGGGACCATGCCTGCTGGATGCTCCTCAGGGCCTGGCCGTGTCTGCATCCCCCTaGAGAAGCAGCCAGGTTGTC | + |
|
Preference number: 5 (lower is better) Translates to: ASLLYKGPCLLDAPQGLAVSASP*RSSQVV Trigger: GACAACCTGGCTGCTTCTCAAGGGGGATGCAGACAC...GGCCAGGCCCTGAGGAGCATCCAGCAGGCATGGTCCCTTGTATAGCAAGGATGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
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| CDS TCA 90 bp | GCAATGTGGGTGGGGAACACTTCTGGCACATACACTCCTTCCCGTTaGAGGTCACACGGTCCCCAGGAGGAAAGGGCAGCCTGCAGACAG | + |
|
Preference number: 5 (lower is better) Translates to: AMWVGNTSGTYTPSR*RSHGPQEERAACRQ Trigger: CTGTCTGCAGGCTGCCCTTTCCTCCTGGGGACCGTGTGACCTTCAACGGGAAGGAGTGTATGTGCCAGAAGTGTTCCCCACCCACATTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 ENSMUST00000129347.8 |
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| CDS TCA 90 bp | GATCTCATCGCCAAGCTTTGCGTAGATCACACGGCTCGGGGACCCTaGCGTGCTGGAGGCAGGCACGGAGACAATGCTCTCCGAAGAAGT | + |
|
Preference number: 5 (lower is better) Translates to: DLIAKLCVDHTARGP*RAGGRHGDNALRRS Trigger: ACTTCTTCGGAGAGCATTGTCTCCGTGCCTGCCTCCAGCACGTCAGGGTCCCCGAGCCGTGTGATCTACGCAAAGCTTGGCGATGAGATC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 11 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114203.8 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 ENSMUST00000129347.8 ENSMUST00000130233.8 ENSMUST00000151322.8 ENSMUST00000151636.8 |
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| CDS TCA 90 bp | CTTTGGAGAGGTTCCTGGTCAGTCCCGCTGCTGAGGGACAGCGACTaGCTGTCCAGGTCTGGAGAGTTAGTTCTGGTGTCTGCATCCCCC | + |
|
Preference number: 5 (lower is better) Translates to: LWRGSWSVPLLRDSD*LSRSGELVLVSASP Trigger: GGGGGATGCAGACACCAGAACTAACTCTCCAGACCTGGACAGTCAGTCGCTGTCCCTCAGCAGCGGGACTGACCAGGAACCTCTCCAAAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114203.8 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 ENSMUST00000125378.2 ENSMUST00000129347.8 ENSMUST00000151636.8 |
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| CDS GCA 90 bp | TCCTTGCTCTTGTCTTCAGTCCTGGCTGCCTGTCGACATGCCGGATaGCAGATGGAGGAGCCTTGCAGGTACATCTCCTCGCCCTCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: SLLLSSVLAACRHAG*QMEEPCRYISSPSE Trigger: CTCAGAGGGCGAGGAGATGTACCTGCAAGGCTCCTCCATCTGGCATCCGGCATGTCGACAGGCAGCCAGGACTGAAGACAAGAGCAAGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000114203.8 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
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| CDS GCA 90 bp | GCTGTGCATCTTGCTCTTGTCTTCAGTCCTGGCTGCCTGTCGACATaGCGGATGCCAGATGGAGGAGCCTTGCAGGTACATCTCCTCGCC | + |
|
Preference number: 5 (lower is better) Translates to: AVHLALVFSPGCLST*RMPDGGALQVHLLA Trigger: GGCGAGGAGATGTACCTGCAAGGCTCCTCCATCTGGCATCCGGCATGTCGACAGGCAGCCAGGACTGAAGACAAGAGCAAGATGCACAGC 59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000101280.10 ENSMUST00000129347.8 ENSMUST00000130233.8 |
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| CDS CCA 90 bp | CTGGTCAGTCCCGCTGCTGAGGGACAGCGACTGACTGTCCAGGTCTaGAGAGTTAGTTCTGGTGTCTGCATCCCCCTTGAGAAGCAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: LVSPAAEGQRLTVQV*RVSSGVCIPLEKQP Trigger: TGGCTGCTTCTCAAGGGGGATGCAGACACCAGAACTAACTCTCCAGACCTGGACAGTCAGTCGCTGTCCCTCAGCAGCGGGACTGACCAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 10 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114203.8 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 ENSMUST00000125378.2 ENSMUST00000129347.8 ENSMUST00000151636.8 |
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| CDS-3UTR CAA 90 bp | GCATCCTTGCTATACAAGGGACCATGCCTGCTGGATGCTCCTCAGGGCCTGGCCAGGGCCTGGCCATTCTaGATTTCTAAGCCACAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: ASLLYKGPCLLDAPQGLARAWPF*ISKPQP Trigger: GGGCTGTGGCTTAGAAATCAAGAATGGCCAGGCCCT...GGCCAGGCCCTGAGGAGCATCCAGCAGGCATGGTCCCTTGTATAGCAAGGATGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
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| CDS-3UTR CAA 90 bp | TTTGGCCTGGCTCCCCTGCCTCAGTCTGCAAGGCTACTTGGTACCTCCTCACGCAGGGCCTGGCCATTCTaGATTTCTAAGCCACAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: FGLAPLPQSARLLGTSSRRAWPF*ISKPQP Trigger: GGGCTGTGGCTTAGAAATCAAGAATGGCCAGGCCCT...GCGTGAGGAGGTACCAAGTAGCCTTGCAGACTGAGGCAGGGGAGCCAGGCCAAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
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| CDS-3UTR CAA 90 bp | CCCAGTTGTGGCGGGAAGGAGTGGGTCAAGCTGGCACCTGGCCCTAAACTACAGAGGGCCTGGCCATTCTaGATTTCTAAGCCACAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: PSCGGKEWVKLAPGPKLQRAWPF*ISKPQP Trigger: GGGCTGTGGCTTAGAAATCAAGAATGGCCAGGCCCT...CTGTAGTTTAGGGCCAGGTGCCAGCTTGACCCACTCCTTCCCGCCACAACTGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
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| CDS-3UTR CAA 90 bp | AGGTTGGAGGAGGCACCGCCTCTAGCTGTCCATCTCTGCCGCTGCAGTCAATGGAGGGCCTGGCCATTCTaGATTTCTAAGCCACAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: RLEEAPPLAVHLCRCSQWRAWPF*ISKPQP Trigger: GGGCTGTGGCTTAGAAATCAAGAATGGCCAGGCCCT...CCATTGACTGCAGCGGCAGAGATGGACAGCTAGAGGCGGTGCCTCCTCCAACCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054598.12 ENSMUST00000114206.9 |
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| CDS-3UTR CAA 90 bp | CCGAGAAGTCTCACACTTACCATTCCTGCTGTGTCAGAGTCTGCCCCTGACAAGCCCAGGTGCCAGTGCTaGTCCAAAGCCACCAGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: PRSLTLTIPAVSESAPDKPRCQC*SKATRA Trigger: GGCCCTGGTGGCTTTGGACAAGCACTGGCACCTGGG...CTTGTCAGGGGCAGACTCTGACACAGCAGGAATGGTAAGTGTGAGACTTCTCGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
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| CDS-3UTR CAA 90 bp | TCCTCACGCTCCGAGAAGTCTCACACTTACCATTCCTGCTGTGTCAGAGTCTGCCCCAGGTGCCAGTGCTaGTCCAAAGCCACCAGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: SSRSEKSHTYHSCCVRVCPRCQC*SKATRA Trigger: GGCCCTGGTGGCTTTGGACAAGCACTGGCACCTGGG...GCAGACTCTGACACAGCAGGAATGGTAAGTGTGAGACTTCTCGGAGCGTGAGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
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| CDS-3UTR CAA 90 bp | TGGTACCTCCTCACGCTCCGAGAAGTCTCACACTTACCATTCCTGCTGTGTCAGGGGGTGACCGTGAGGTaGGGGTGTAGTGTCCGAGGC | + |
|
Preference number: 5 (lower is better) Translates to: WYLLTLREVSHLPFLLCQGVTVR*GCSVRG Trigger: GCCTCGGACACTACACCCCAACCTCACGGTCACCCC...CTGACACAGCAGGAATGGTAAGTGTGAGACTTCTCGGAGCGTGAGGAGGTACCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
||
| CDS-3UTR CAA 90 bp | GCAACCCAGAGGAGGGGACAGCTAGAGTCACCCAGGACCACAGTGTCCACCCATGTCCCCTGCCATTCTTaGGAGAGGTTCCTGGTCAGT | + |
|
Preference number: 5 (lower is better) Translates to: ATQRRGQLESPRTTVSTHVPCHS*ERFLVS Trigger: ACTGACCAGGAACCTCTCCAAAGAATGGCAGGGGAC...ATGGGTGGACACTGTGGTCCTGGGTGACTCTAGCTGTCCCCTCCTCTGGGTTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054598.12 ENSMUST00000114206.9 |
||
| CDS-3UTR CAA 90 bp | TTGGCCTGGCTCCCCTGCCTCAGTCTGCAAGGCTACTTGGTACCTCCTCACGCTGTCCCCTGCCATTCTTaGGAGAGGTTCCTGGTCAGT | + |
|
Preference number: 5 (lower is better) Translates to: LAWLPCLSLQGYLVPPHAVPCHS*ERFLVS Trigger: ACTGACCAGGAACCTCTCCAAAGAATGGCAGGGGAC...AGCGTGAGGAGGTACCAAGTAGCCTTGCAGACTGAGGCAGGGGAGCCAGGCCAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
||
| CDS-3UTR CAA 90 bp | AACACTGCCCTGATGCCCAGTTGTGGCGGGAAGGAGTGGGTCAAGCTGGCACCTGTCCCCTGCCATTCTTaGGAGAGGTTCCTGGTCAGT | + |
|
Preference number: 5 (lower is better) Translates to: NTALMPSCGGKEWVKLAPVPCHS*ERFLVS Trigger: ACTGACCAGGAACCTCTCCAAAGAATGGCAGGGGAC...AGGTGCCAGCTTGACCCACTCCTTCCCGCCACAACTGGGCATCAGGGCAGTGTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
||
| CDS GCA 90 bp | ATCTTGCTCTTGTCTTCAGTCCTGGCTGCCTGTCGACATGCCGGATaGCAGATGGAGGAGCCTTGCAGGTACATCTCCTCGCCCTCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: ILLLSSVLAACRHAG*QMEEPCRYISSPSE Trigger: CTCAGAGGGCGAGGAGATGTACCTGCAAGGCTCCTCCATCTGGCATCCGGCATGTCGACAGGCAGCCAGGACTGAAGACAAGAGCAAGAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000101280.10 ENSMUST00000129347.8 ENSMUST00000130233.8 |
||
| CDS CCA 90 bp | GCTGGCTGCAAACAGAGCTGTGCATCTTGCTCTTGTCTTCAGTCCTaGCTGCCTGTCGACATGCCGGATGCCAGATGGAGGAGCCTTGCA | + |
|
Preference number: 5 (lower is better) Translates to: AGCKQSCASCSCLQS*LPVDMPDARWRSLA Trigger: TGCAAGGCTCCTCCATCTGGCATCCGGCATGTCGACAGGCAGCCAGGACTGAAGACAAGAGCAAGATGCACAGCTCTGTTTGCAGCCAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000101280.10 ENSMUST00000129347.8 ENSMUST00000130233.8 |
||
| CDS CCA 90 bp | CCTCCTGCACCACCAAGGACAAAACTGACACCAGGCCAGAGAGCTTaGACATTGGGGACTGGGCTACAGGACCTGGACGACTGTAGTGCT | + |
|
Preference number: 5 (lower is better) Translates to: PPAPPRTKLTPGQRA*TLGTGLQDLDDCSA Trigger: AGCACTACAGTCGTCCAGGTCCTGTAGCCCAGTCCCCAATGTCCAAGCTCTCTGGCCTGGTGTCAGTTTTGTCCTTGGTGGTGCAGGAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151322.8 |
||
| CDS-3UTR CAA 90 bp | CCAGTTGTGGCGGGAAGGAGTGGGTCAAGCTGGCACCTGGCCCTAAACTACAGGTCACAGCCACACGCTTaGCACACAAAGCACCTGATG | + |
|
Preference number: 5 (lower is better) Translates to: PVVAGRSGSSWHLALNYRSQPHA*HTKHLM Trigger: CATCAGGTGCTTTGTGTGCAAAGCGTGTGGCTGTGA...CCTGTAGTTTAGGGCCAGGTGCCAGCTTGACCCACTCCTTCCCGCCACAACTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
||
| CDS-3UTR CAA 90 bp | CTGCTGAGCGAGCGAGTGAGTGTCTTTGAGGCTGTCTGTGTGACACATACAAAGCCCAGGTGCCAGTGCTaGTCCAAAGCCACCAGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: LLSERVSVFEAVCVTHTKPRCQC*SKATRA Trigger: GGCCCTGGTGGCTTTGGACAAGCACTGGCACCTGGG...CTTTGTATGTGTCACACAGACAGCCTCAAAGACACTCACTCGCTCGCTCAGCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
||
| CDS-3UTR CAA 90 bp | CTCACGCTCCGAGAAGTCTCACACTTACCATTCCTGCTGTGTCAGAGTCTGCCCCCAGATGGAGGAGCCTaGCAGGTACATCTCCTCGCC | + |
|
Preference number: 5 (lower is better) Translates to: LTLREVSHLPFLLCQSLPPDGGA*QVHLLA Trigger: GGCGAGGAGATGTACCTGCAAGGCTCCTCCATCTGG...GGGCAGACTCTGACACAGCAGGAATGGTAAGTGTGAGACTTCTCGGAGCGTGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
||
| CDS-3UTR CAA 90 bp | TGTGGCGGGAAGGAGTGGGTCAAGCTGGCACCTGGCCCTAAACTACAGGCAAGAGTCCCCTGCCATTCTTaGGAGAGGTTCCTGGTCAGT | + |
|
Preference number: 5 (lower is better) Translates to: CGGKEWVKLAPGPKLQARVPCHS*ERFLVS Trigger: ACTGACCAGGAACCTCTCCAAAGAATGGCAGGGGAC...TCTTGCCTGTAGTTTAGGGCCAGGTGCCAGCTTGACCCACTCCTTCCCGCCACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
||
| CDS TCA 90 bp | CACCCTCAGCCAGGTCACAGCCACACGCTTTGCACACAAAGCACCTaGTGTGGAAGTACTTGTTCTGCACACGCAGCACCTCTCCCTTGC | + |
|
Preference number: 5 (lower is better) Translates to: HPQPGHSHTLCTQST*CGSTCSAHAAPLPC Trigger: GCAAGGGAGAGGTGCTGCGTGTGCAGAACAAGTACTTCCACATCAGGTGCTTTGTGTGCAAAGCGTGTGGCTGTGACCTGGCTGAGGGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 ENSMUST00000129347.8 |
||
| CDS GCA 90 bp | CTCCGAAGAAGTCCTGGTTTCCTTGCTCTTGTCTTCAGTCCTGGCTaGCTGTCGACATGCCGGATGCCAGATGGAGGAGCCTTGCAGGTA | + |
|
Preference number: 5 (lower is better) Translates to: LRRSPGFLALVFSPG*LSTCRMPDGGALQV Trigger: TACCTGCAAGGCTCCTCCATCTGGCATCCGGCATGTCGACAGGCAGCCAGGACTGAAGACAAGAGCAAGGAAACCAGGACTTCTTCGGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000114203.8 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
||
| CDS GCA 90 bp | GCTGCAAACAGAGCTGTGCATCTTGCTCTTGTCTTCAGTCCTGGCTaGCTGTCGACATGCCGGATGCCAGATGGAGGAGCCTTGCAGGTA | + |
|
Preference number: 5 (lower is better) Translates to: AANRAVHLALVFSPG*LSTCRMPDGGALQV Trigger: TACCTGCAAGGCTCCTCCATCTGGCATCCGGCATGTCGACAGGCAGCCAGGACTGAAGACAAGAGCAAGATGCACAGCTCTGTTTGCAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000101280.10 ENSMUST00000129347.8 ENSMUST00000130233.8 |
||
| CDS CCA 90 bp | TGCTCTCCGAAGAAGTCCTGGTTTCCTTGCTCTTGTCTTCAGTCCTaGCTGCCTGTCGACATGCCGGATGCCAGATGGAGGAGCCTTGCA | + |
|
Preference number: 5 (lower is better) Translates to: CSPKKSWFPCSCLQS*LPVDMPDARWRSLA Trigger: TGCAAGGCTCCTCCATCTGGCATCCGGCATGTCGACAGGCAGCCAGGACTGAAGACAAGAGCAAGGAAACCAGGACTTCTTCGGAGAGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000114203.8 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
||
| CDS CCA 90 bp | CACAAGGGGCCAGGTTGGCATTCCGGAGGTCCAGGCCATCCTTCCTaGGTCCTGGAAGAGTGTCAGGTTTGGAATAAGGAAAGCGTGAGT | + |
|
Preference number: 5 (lower is better) Translates to: HKGPGWHSGGPGHPS*VLEECQVWNKESVS Trigger: ACTCACGCTTTCCTTATTCCAAACCTGACACTCTTCCAGGACCCAGGAAGGATGGCCTGGACCTCCGGAATGCCAACCTGGCCCCTTGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054598.12 ENSMUST00000114203.8 ENSMUST00000129347.8 |
||
| CDS-3UTR CAA 90 bp | AGACTTTGGCCTGGCTCCCCTGCCTCAGTCTGCAAGGCTACTTGGTACCTCCTCCTGATGTGGAAGTACTaGTTCTGCACACGCAGCACC | + |
|
Preference number: 5 (lower is better) Translates to: RLWPGSPASVCKATWYLLLMWKY*FCTRST Trigger: GGTGCTGCGTGTGCAGAACAAGTACTTCCACATCAG...GAGGAGGTACCAAGTAGCCTTGCAGACTGAGGCAGGGGAGCCAGGCCAAAGTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
||
| CDS-3UTR CAA 90 bp | CCAGTTGTGGCGGGAAGGAGTGGGTCAAGCTGGCACCTGGCCCTAAACTACAGGAGTTTCCCACAAGTCTaGCACTTGAAGCATCCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: PVVAGRSGSSWHLALNYRSFPQV*HLKHPR Trigger: CCTGGGATGCTTCAAGTGCAAGACTTGTGGGAAACT...CCTGTAGTTTAGGGCCAGGTGCCAGCTTGACCCACTCCTTCCCGCCACAACTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
||
| CDS-3UTR CAA 90 bp | TCCTCACGCTCCGAGAAGTCTCACACTTACCATTCCTGCTGTGTCAGAGTCTGCCCAGATGGAGGAGCCTaGCAGGTACATCTCCTCGCC | + |
|
Preference number: 5 (lower is better) Translates to: SSRSEKSHTYHSCCVRVCPDGGA*QVHLLA Trigger: GGCGAGGAGATGTACCTGCAAGGCTCCTCCATCTGG...GCAGACTCTGACACAGCAGGAATGGTAAGTGTGAGACTTCTCGGAGCGTGAGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
||
| CDS-3UTR CAA 90 bp | GTCTCACACTTACCATTCCTGCTGTGTCAGAGTCTGCCCCTGACAAGTCTTTCAGGGGTGACCGTGAGGTaGGGGTGTAGTGTCCGAGGC | + |
|
Preference number: 5 (lower is better) Translates to: VSHLPFLLCQSLPLTSLSGVTVR*GCSVRG Trigger: GCCTCGGACACTACACCCCAACCTCACGGTCACCCC...TGAAAGACTTGTCAGGGGCAGACTCTGACACAGCAGGAATGGTAAGTGTGAGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
||
| CDS-3UTR CAA 90 bp | GACTTTGGCCTGGCTCCCCTGCCTCAGTCTGCAAGGCTACTTGGTACCTCCTCAGTCCGGTCCACGTCTTaGGGCAGTTTCACACGAATT | + |
|
Preference number: 5 (lower is better) Translates to: DFGLAPLPQSARLLGTSSVRSTS*GSFTRI Trigger: AATTCGTGTGAAACTGCCCAAAGACGTGGACCGGAC...TGAGGAGGTACCAAGTAGCCTTGCAGACTGAGGCAGGGGAGCCAGGCCAAAGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 |
||
| CDS GCA 90 bp | GGACAGCGACTGACTGTCCAGGTCTGGAGAGTTAGTTCTGGTGTCTaGATCCCCCTTGAGAAGCAGCCAGGTTGTCTTCTTCCTGCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: GQRLTVQVWRVSSGV*IPLEKQPGCLLPAV Trigger: GACAGCAGGAAGAAGACAACCTGGCTGCTTCTCAAGGGGGATGCAGACACCAGAACTAACTCTCCAGACCTGGACAGTCAGTCGCTGTCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 10 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114203.8 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 ENSMUST00000125378.2 ENSMUST00000129347.8 ENSMUST00000151636.8 |
||
| CDS-3UTR CAA 90 bp | GCAAGAGCATCCTTGCTATACAAGGGACCATGCCTGCTGGATGCTCCTCAGGGCTCACAGCCACACGCTTaGCACACAAAGCACCTGATG | + |
|
Preference number: 5 (lower is better) Translates to: ARASLLYKGPCLLDAPQGSQPHA*HTKHLM Trigger: CATCAGGTGCTTTGTGTGCAAAGCGTGTGGCTGTGA...GCCCTGAGGAGCATCCAGCAGGCATGGTCCCTTGTATAGCAAGGATGCTCTTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
||
| CDS-3UTR CAA 90 bp | ACTGCTCTGTCCCTATCTCCTAGGATAGCTGGCTGCAACACTGCCCTGATGCCCTCACAGCCACACGCTTaGCACACAAAGCACCTGATG | + |
|
Preference number: 5 (lower is better) Translates to: TALSLSPRIAGCNTALMPSQPHA*HTKHLM Trigger: CATCAGGTGCTTTGTGTGCAAAGCGTGTGGCTGTGA...GGGCATCAGGGCAGTGTTGCAGCCAGCTATCCTAGGAGATAGGGACAGAGCAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
||
| CDS-3UTR CAA 90 bp | CCTGCTGTGTCAGAGTCTGCCCCTGACAAGTCTTTCACTCACGTCCCAGACACTAGGGCCTGGCCATTCTaGATTTCTAAGCCACAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: PAVSESAPDKSFTHVPDTRAWPF*ISKPQP Trigger: GGGCTGTGGCTTAGAAATCAAGAATGGCCAGGCCCT...AGTGTCTGGGACGTGAGTGAAAGACTTGTCAGGGGCAGACTCTGACACAGCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
||
| CDS-3UTR CAA 90 bp | TTTGGCCTGGCTCCCCTGCCTCAGTCTGCAAGGCTACTTGGTACCTCCTCACGCCTGATGTACTCTGCATaGAGGAGTTTCCCACAAGTC | + |
|
Preference number: 5 (lower is better) Translates to: FGLAPLPQSARLLGTSSRLMYSA*RSFPQV Trigger: GACTTGTGGGAAACTCCTCAATGCAGAGTACATCAG...GCGTGAGGAGGTACCAAGTAGCCTTGCAGACTGAGGCAGGGGAGCCAGGCCAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
||
| CDS-3UTR CAA 90 bp | CTGAGCGAGCGAGTGAGTGTCTTTGAGGCTGTCTGTGTGACACATACAAAGGAGCCAGATGGAGGAGCCTaGCAGGTACATCTCCTCGCC | + |
|
Preference number: 5 (lower is better) Translates to: LSERVSVFEAVCVTHTKEPDGGA*QVHLLA Trigger: GGCGAGGAGATGTACCTGCAAGGCTCCTCCATCTGG...CTCCTTTGTATGTGTCACACAGACAGCCTCAAAGACACTCACTCGCTCGCTCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
||
| CDS-3UTR CAA 90 bp | CGTGTCCGGTCCACGTCTTTGGGCAGTTTCACACGAATTCGGTTTGTTACGATGCCAGATGGAGGAGCCTaGCAGGTACATCTCCTCGCC | + |
|
Preference number: 5 (lower is better) Translates to: RVRSTSLGSFTRIRFVTMPDGGA*QVHLLA Trigger: GGCGAGGAGATGTACCTGCAAGGCTCCTCCATCTGG...CATCGTAACAAACCGAATTCGTGTGAAACTGCCCAAAGACGTGGACCGGACACG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114210.9 |
||
| CDS CCA 90 bp | GGAGGTCCAGGCCATCCTTCCTGGGTCCTGGAAGAGTGTCAGGTTTaGAATAAGGAAAGCGTGAGTAGAGGCTGTCCCCTGCCATTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: GGPGHPSWVLEECQV*NKESVSRGCPLPFF Trigger: AAAGAATGGCAGGGGACAGCCTCTACTCACGCTTTCCTTATTCCAAACCTGACACTCTTCCAGGACCCAGGAAGGATGGCCTGGACCTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000054598.12 ENSMUST00000114203.8 ENSMUST00000129347.8 ENSMUST00000153529.2 |
||
| CDS-3UTR CAA 90 bp | CCTGCTGTGTCAGAGTCTGCCCCTGACAAGTCTTTCACTCACGTCCCAGACACTTCACAGCCACACGCTTaGCACACAAAGCACCTGATG | + |
|
Preference number: 5 (lower is better) Translates to: PAVSESAPDKSFTHVPDTSQPHA*HTKHLM Trigger: CATCAGGTGCTTTGTGTGCAAAGCGTGTGGCTGTGA...AGTGTCTGGGACGTGAGTGAAAGACTTGTCAGGGGCAGACTCTGACACAGCAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
||
| CDS-3UTR CAA 90 bp | TCGCAGACTTTGGCCTGGCTCCCCTGCCTCAGTCTGCAAGGCTACTTGGTACCTCTGATGTACTCTGCATaGAGGAGTTTCCCACAAGTC | + |
|
Preference number: 5 (lower is better) Translates to: SQTLAWLPCLSLQGYLVPLMYSA*RSFPQV Trigger: GACTTGTGGGAAACTCCTCAATGCAGAGTACATCAG...AGGTACCAAGTAGCCTTGCAGACTGAGGCAGGGGAGCCAGGCCAAAGTCTGCGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
||
| CDS-3UTR CAA 90 bp | AAGGTGCTGGGCTGGCTGACTGCTCTGTCCCTATCTCCTAGGATAGCTGGCTGCCTGATGTACTCTGCATaGAGGAGTTTCCCACAAGTC | + |
|
Preference number: 5 (lower is better) Translates to: KVLGWLTALSLSPRIAGCLMYSA*RSFPQV Trigger: GACTTGTGGGAAACTCCTCAATGCAGAGTACATCAG...GCAGCCAGCTATCCTAGGAGATAGGGACAGAGCAGTCAGCCAGCCCAGCACCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
||
| CDS-3UTR CAA 90 bp | TGTGGCGGGAAGGAGTGGGTCAAGCTGGCACCTGGCCCTAAACTACAGGCAAGACTGATGTACTCTGCATaGAGGAGTTTCCCACAAGTC | + |
|
Preference number: 5 (lower is better) Translates to: CGGKEWVKLAPGPKLQARLMYSA*RSFPQV Trigger: GACTTGTGGGAAACTCCTCAATGCAGAGTACATCAG...TCTTGCCTGTAGTTTAGGGCCAGGTGCCAGCTTGACCCACTCCTTCCCGCCACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
||
| CDS-3UTR CAA 90 bp | CTACTTGGTACCTCCTCACGCTCCGAGAAGTCTCACACTTACCATTCCTGCTGTGTGTCTGCATCCCCCTaGAGAAGCAGCCAGGTTGTC | + |
|
Preference number: 5 (lower is better) Translates to: LLGTSSRSEKSHTYHSCCVSASP*RSSQVV Trigger: GACAACCTGGCTGCTTCTCAAGGGGGATGCAGACAC...ACAGCAGGAATGGTAAGTGTGAGACTTCTCGGAGCGTGAGGAGGTACCAAGTAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
||
| CDS-3UTR CAA 90 bp | CTGCTGAGCGAGCGAGTGAGTGTCTTTGAGGCTGTCTGTGTGACACATACAAAGGTGTCTGCATCCCCCTaGAGAAGCAGCCAGGTTGTC | + |
|
Preference number: 5 (lower is better) Translates to: LLSERVSVFEAVCVTHTKVSASP*RSSQVV Trigger: GACAACCTGGCTGCTTCTCAAGGGGGATGCAGACAC...CTTTGTATGTGTCACACAGACAGCCTCAAAGACACTCACTCGCTCGCTCAGCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
||
| CDS-3UTR CAA 90 bp | GCTGTGTCAGAGTCTGCCCCTGACAAGTCTTTCACTCACGTCCCAGACACTCTGGTCCGGTCCACGTCTTaGGGCAGTTTCACACGAATT | + |
|
Preference number: 5 (lower is better) Translates to: AVSESAPDKSFTHVPDTLVRSTS*GSFTRI Trigger: AATTCGTGTGAAACTGCCCAAAGACGTGGACCGGAC...CAGAGTGTCTGGGACGTGAGTGAAAGACTTGTCAGGGGCAGACTCTGACACAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 |
||
| CDS-3UTR CAA 90 bp | CTCACGCTCCGAGAAGTCTCACACTTACCATTCCTGCTGTGTCAGAGTCTGCCCGTCCGGTCCACGTCTTaGGGCAGTTTCACACGAATT | + |
|
Preference number: 5 (lower is better) Translates to: LTLREVSHLPFLLCQSLPVRSTS*GSFTRI Trigger: AATTCGTGTGAAACTGCCCAAAGACGTGGACCGGAC...GGGCAGACTCTGACACAGCAGGAATGGTAAGTGTGAGACTTCTCGGAGCGTGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 |
||
| CDS TCA 90 bp | CTTCCTGGGTCCTGGAAGAGTGTCAGGTTTGGAATAAGGAAAGCGTaGGTAGAGGCTGTCCCCTGCCATTCTTTGGAGAGGTTCCTGGTC | + |
|
Preference number: 5 (lower is better) Translates to: LPGSWKSVRFGIRKA*VEAVPCHSLERFLV Trigger: GACCAGGAACCTCTCCAAAGAATGGCAGGGGACAGCCTCTACTCACGCTTTCCTTATTCCAAACCTGACACTCTTCCAGGACCCAGGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000054598.12 ENSMUST00000114203.8 ENSMUST00000129347.8 ENSMUST00000153529.2 |
||
| CDS-3UTR CAA 90 bp | TGGTACCTCCTCACGCTCCGAGAAGTCTCACACTTACCATTCCTGCTGTGTCAGCTGATGTGGAAGTACTaGTTCTGCACACGCAGCACC | + |
|
Preference number: 5 (lower is better) Translates to: WYLLTLREVSHLPFLLCQLMWKY*FCTRST Trigger: GGTGCTGCGTGTGCAGAACAAGTACTTCCACATCAG...CTGACACAGCAGGAATGGTAAGTGTGAGACTTCTCGGAGCGTGAGGAGGTACCA 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
||
| CDS-3UTR CAA 90 bp | GCTGTGTCAGAGTCTGCCCCTGACAAGTCTTTCACTCACGTCCCAGACACTCTGAGTTTCCCACAAGTCTaGCACTTGAAGCATCCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: AVSESAPDKSFTHVPDTLSFPQV*HLKHPR Trigger: CCTGGGATGCTTCAAGTGCAAGACTTGTGGGAAACT...CAGAGTGTCTGGGACGTGAGTGAAAGACTTGTCAGGGGCAGACTCTGACACAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
||
| CDS-3UTR CAA 90 bp | CCTGCTGTGTCAGAGTCTGCCCCTGACAAGTCTTTCACTCACGTCCCAGACACTAGTTTCCCACAAGTCTaGCACTTGAAGCATCCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: PAVSESAPDKSFTHVPDTSFPQV*HLKHPR Trigger: CCTGGGATGCTTCAAGTGCAAGACTTGTGGGAAACT...AGTGTCTGGGACGTGAGTGAAAGACTTGTCAGGGGCAGACTCTGACACAGCAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
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| CDS-3UTR CAA 90 bp | CTCACACTTACCATTCCTGCTGTGTCAGAGTCTGCCCCTGACAAGTCTTTCACTGTGTCTGCATCCCCCTaGAGAAGCAGCCAGGTTGTC | + |
|
Preference number: 5 (lower is better) Translates to: LTLTIPAVSESAPDKSFTVSASP*RSSQVV Trigger: GACAACCTGGCTGCTTCTCAAGGGGGATGCAGACAC...AGTGAAAGACTTGTCAGGGGCAGACTCTGACACAGCAGGAATGGTAAGTGTGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
||
| CDS-3UTR CAA 90 bp | GAAACCTTTATTCTAGGGATTTGGCCATCAGGGGGCGCTCTTCTCTTAGCGACTGTGTCTGCATCCCCCTaGAGAAGCAGCCAGGTTGTC | + |
|
Preference number: 5 (lower is better) Translates to: ETFILGIWPSGGALLLATVSASP*RSSQVV Trigger: GACAACCTGGCTGCTTCTCAAGGGGGATGCAGACAC...AGTCGCTAAGAGAAGAGCGCCCCCTGATGGCCAAATCCCTAGAATAAAGGTTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
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| CDS-3UTR CAA 90 bp | GTCTCACACTTACCATTCCTGCTGTGTCAGAGTCTGCCCCTGACAAGTCTTTCAGTGTCTGCATCCCCCTaGAGAAGCAGCCAGGTTGTC | + |
|
Preference number: 5 (lower is better) Translates to: VSHLPFLLCQSLPLTSLSVSASP*RSSQVV Trigger: GACAACCTGGCTGCTTCTCAAGGGGGATGCAGACAC...TGAAAGACTTGTCAGGGGCAGACTCTGACACAGCAGGAATGGTAAGTGTGAGAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
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| CDS CCA 90 bp | TCGGAAGTAGGGGATGTAATGATGTCTGAACACGGATGTAGGGCTTaGGTGTTGGGACAGGGACAGACAGCTACTGGTACCAACACTCAC | + |
|
Preference number: 5 (lower is better) Translates to: SEVGDVMMSEHGCRA*VLGQGQTATGTNTH Trigger: GTGAGTGTTGGTACCAGTAGCTGTCTGTCCCTGTCCCAACACCCAAGCCCTACATCCGTGTTCAGACATCATTACATCCCCTACTTCCGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114206.9 ENSMUST00000114210.9 ENSMUST00000125378.2 ENSMUST00000129347.8 |
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| CDS-3UTR CAA 90 bp | CTGTGTCAGAGTCTGCCCCTGACAAGTCTTTCACTCACGTCCCAGACACTCTGTAGTTTCCCACAAGTCTaGCACTTGAAGCATCCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: LCQSLPLTSLSLTSQTLCSFPQV*HLKHPR Trigger: CCTGGGATGCTTCAAGTGCAAGACTTGTGGGAAACT...ACAGAGTGTCTGGGACGTGAGTGAAAGACTTGTCAGGGGCAGACTCTGACACAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
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| CDS-3UTR CAA 90 bp | AGCTCAGGCTGGCCTCAAACTCACAGCAATCTTTCTGCCATCCAAATGTTAGGGGTCCCCTGCCATTCTTaGGAGAGGTTCCTGGTCAGT | + |
|
Preference number: 5 (lower is better) Translates to: SSGWPQTHSNLSAIQMLGVPCHS*ERFLVS Trigger: ACTGACCAGGAACCTCTCCAAAGAATGGCAGGGGAC...CCCTAACATTTGGATGGCAGAAAGATTGCTGTGAGTTTGAGGCCAGCCTGAGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125378.2 |
||
| CDS-3UTR CAA 90 bp | CTGCTGAGCGAGCGAGTGAGTGTCTTTGAGGCTGTCTGTGTGACACATACAAAGGTCCGGTCCACGTCTTaGGGCAGTTTCACACGAATT | + |
|
Preference number: 5 (lower is better) Translates to: LLSERVSVFEAVCVTHTKVRSTS*GSFTRI Trigger: AATTCGTGTGAAACTGCCCAAAGACGTGGACCGGAC...CTTTGTATGTGTCACACAGACAGCCTCAAAGACACTCACTCGCTCGCTCAGCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114206.9 |
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| CDS TCA 90 bp | GGTCCACGTCTTTGGGCAGTTTCACACGAATTCGGTTTGTTACGATaGGGGAATCATAGGGATATATCCGGAGGTCCAGGCCATCCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: GPRLWAVSHEFGLLR*GNHRDISGGPGHPS Trigger: GGAAGGATGGCCTGGACCTCCGGATATATCCCTATGATTCCCTCATCGTAACAAACCGAATTCGTGTGAAACTGCCCAAAGACGTGGACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153529.2 |
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| CDS-3UTR CAA 90 bp | TGGTACCTCCTCACGCTCCGAGAAGTCTCACACTTACCATTCCTGCTGTGTCAGCTGATGTACTCTGCATaGAGGAGTTTCCCACAAGTC | + |
|
Preference number: 5 (lower is better) Translates to: WYLLTLREVSHLPFLLCQLMYSA*RSFPQV Trigger: GACTTGTGGGAAACTCCTCAATGCAGAGTACATCAG...CTGACACAGCAGGAATGGTAAGTGTGAGACTTCTCGGAGCGTGAGGAGGTACCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
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| CDS-3UTR CAA 90 bp | TCAGGCTGGCCTCAAACTCACAGCAATCTTTCTGCCATCCAAATGTTAGGGTTAGTGTCTGCATCCCCCTaGAGAAGCAGCCAGGTTGTC | + |
|
Preference number: 5 (lower is better) Translates to: SGWPQTHSNLSAIQMLGLVSASP*RSSQVV Trigger: GACAACCTGGCTGCTTCTCAAGGGGGATGCAGACAC...TAACCCTAACATTTGGATGGCAGAAAGATTGCTGTGAGTTTGAGGCCAGCCTGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000125378.2 |
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| CDS-3UTR CAA 90 bp | TTGCGCAGGTCCAGACTGCTAAGTGGCAGGAAGCAGATTAAGTACCAAAAGTTCGTCCCCTGCCATTCTTaGGAGAGGTTCCTGGTCAGT | + |
|
Preference number: 5 (lower is better) Translates to: LRRSRLLSGRKQIKYQKFVPCHS*ERFLVS Trigger: ACTGACCAGGAACCTCTCCAAAGAATGGCAGGGGAC...GAACTTTTGGTACTTAATCTGCTTCCTGCCACTTAGCAGTCTGGACCTGCGCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054598.12 ENSMUST00000114206.9 |
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| CDS-3UTR CAA 90 bp | CTCACACTTACCATTCCTGCTGTGTCAGAGTCTGCCCCTGACAAGTCTTTCACTGTCCGGTCCACGTCTTaGGGCAGTTTCACACGAATT | + |
|
Preference number: 5 (lower is better) Translates to: LTLTIPAVSESAPDKSFTVRSTS*GSFTRI Trigger: AATTCGTGTGAAACTGCCCAAAGACGTGGACCGGAC...AGTGAAAGACTTGTCAGGGGCAGACTCTGACACAGCAGGAATGGTAAGTGTGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 |
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| CDS-3UTR CAA 90 bp | GAAACCTTTATTCTAGGGATTTGGCCATCAGGGGGCGCTCTTCTCTTAGCGACTAGTTTCCCACAAGTCTaGCACTTGAAGCATCCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: ETFILGIWPSGGALLLATSFPQV*HLKHPR Trigger: CCTGGGATGCTTCAAGTGCAAGACTTGTGGGAAACT...AGTCGCTAAGAGAAGAGCGCCCCCTGATGGCCAAATCCCTAGAATAAAGGTTTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
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| CDS TCA 90 bp | GGTCCACGTCTTTGGGCAGTTTCACACGAATTCGGTTTGTTACGATaGGGGAATCATAGGGATATATCTTATACTCTCGCGTGCCCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: GPRLWAVSHEFGLLR*GNHRDISYTLACPS Trigger: GCTGGGGCACGCGAGAGTATAAGATATATCCCTATGATTCCCTCATCGTAACAAACCGAATTCGTGTGAAACTGCCCAAAGACGTGGACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000054598.12 ENSMUST00000114203.8 ENSMUST00000129347.8 |
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| CDS-3UTR CAA 90 bp | GTCTCACACTTACCATTCCTGCTGTGTCAGAGTCTGCCCCTGACAAGTCTTTCACTGATGTACTCTGCATaGAGGAGTTTCCCACAAGTC | + |
|
Preference number: 5 (lower is better) Translates to: VSHLPFLLCQSLPLTSLSLMYSA*RSFPQV Trigger: GACTTGTGGGAAACTCCTCAATGCAGAGTACATCAG...TGAAAGACTTGTCAGGGGCAGACTCTGACACAGCAGGAATGGTAAGTGTGAGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
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| CDS-3UTR CAA 90 bp | TACATTTCACATGTATTTACAAACGGCACTGCTGAGCGAGCGAGTGAGTGTCTTCTGATGTGGAAGTACTaGTTCTGCACACGCAGCACC | + |
|
Preference number: 5 (lower is better) Translates to: YISHVFTNGTAERASECLLMWKY*FCTRST Trigger: GGTGCTGCGTGTGCAGAACAAGTACTTCCACATCAG...AAGACACTCACTCGCTCGCTCAGCAGTGCCGTTTGTAAATACATGTGAAATGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
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| CDS-3UTR CAA 90 bp | TACATTTCACATGTATTTACAAACGGCACTGCTGAGCGAGCGAGTGAGTGTCTTTCACAGCCACACGCTTaGCACACAAAGCACCTGATG | + |
|
Preference number: 5 (lower is better) Translates to: YISHVFTNGTAERASECLSQPHA*HTKHLM Trigger: CATCAGGTGCTTTGTGTGCAAAGCGTGTGGCTGTGA...AAGACACTCACTCGCTCGCTCAGCAGTGCCGTTTGTAAATACATGTGAAATGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114206.9 ENSMUST00000114210.9 |
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| CDS TCA 90 bp | GGTCCACGTCTTTGGGCAGTTTCACACGAATTCGGTTTGTTACGATaGGGGAATCATAGGGATATATCTTATACTGTGAGTAGAGGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: GPRLWAVSHEFGLLR*GNHRDISYTVSRGC Trigger: ACAGCCTCTACTCACAGTATAAGATATATCCCTATGATTCCCTCATCGTAACAAACCGAATTCGTGTGAAACTGCCCAAAGACGTGGACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 |
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| CDS CAA 90 bp | CGCGTGCCCCAGCTGGCATCCGGGTCTGCTCCACAAGGGGCCAGGTaGGCATTCCGGAGGTCCAGGCCATCCTTCCTGGGTCCTGGAAGA | + |
|
Preference number: 6 (lower is better) Translates to: RVPQLASGSAPQGAR*AFRRSRPSFLGPGR Trigger: TCTTCCAGGACCCAGGAAGGATGGCCTGGACCTCCGGAATGCCAACCTGGCCCCTTGTGGAGCAGACCCGGATGCCAGCTGGGGCACGCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000054598.12 ENSMUST00000114203.8 ENSMUST00000129347.8 |
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| CDS TCA 72 bp | CCACAGCCCCCACAACTCCGGAGGCCCTGGGCCACGTaGGCACTGTTGCCCAGCAATGTGGGTGGGGAACAC | + |
|
Preference number: 6 (lower is better) Translates to: PQPPQLRRPWAT*ALLPSNVGGEH Trigger: GTGTTCCCCACCCACATTGCTGGGCAACAGTGCTCACGTGGCCCAGGGCCTCCGGAGTTGTGGGGGCTGTGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 ENSMUST00000129347.8 |
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| CDS GCA 72 bp | CTTATACTCTCGCGTGCCCCAGCTGGCATCCGGGTCTaGTCCACAAGGGGCCAGGTTGGCATTCCGGAGGTC | + |
|
Preference number: 6 (lower is better) Translates to: LILSRAPAGIRV*STRGQVGIPEV Trigger: GACCTCCGGAATGCCAACCTGGCCCCTTGTGGAGCAGACCCGGATGCCAGCTGGGGCACGCGAGAGTATAAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000054598.12 ENSMUST00000114203.8 ENSMUST00000129347.8 |
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| CDS GCA 72 bp | AAAGCTGCTGTCCTCCACGTCCAATCGCCTGGCAGCTaGAGCCTGCGGTGGGCTCAGCCCTGCCCATCTCTT | + |
|
Preference number: 6 (lower is better) Translates to: KAAVLHVQSPGS*SLRWAQPCPSL Trigger: AAGAGATGGGCAGGGCTGAGCCCACCGCAGGCTGCAGCTGCCAGGCGATTGGACGTGGAGGACAGCAGCTTT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151322.8 |
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| CDS CCA 72 bp | ATTACACAGGATCGCAGTGCTGGCCGGCTTCTCCAGTaGGGCATGAGCAGCCTGGGGCTGCGACACTGCGCT | + |
|
Preference number: 6 (lower is better) Translates to: ITQDRSAGRLLQ*GMSSLGLRHCA Trigger: AGCGCAGTGTCGCAGCCCCAGGCTGCTCATGCCCCACTGGAGAAGCCGGCCAGCACTGCGATCCTGTGTAAT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 ENSMUST00000129347.8 |
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| CDS CAA 90 bp | CCCAGGTGCCAGTGCTTGTCCAAAGCCACCAGGGCCTGGCCATTCTaGATTTCTAAGCCACAGCCCCCACAACTCCGGAGGCCCTGGGCC | + |
|
Preference number: 6 (lower is better) Translates to: PRCQCLSKATRAWPF*ISKPQPPQLRRPWA Trigger: GGCCCAGGGCCTCCGGAGTTGTGGGGGCTGTGGCTTAGAAATCAAGAATGGCCAGGCCCTGGTGGCTTTGGACAAGCACTGGCACCTGGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 ENSMUST00000129347.8 |
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| CDS CAA 90 bp | GGCAGGGTGCCCGGGCAGGGCTGGCTGCAAACAGAGCTGTGCATCTaGCTCTTGTCTTCAGTCCTGGCTGCCTGTCGACATGCCGGATGC | + |
|
Preference number: 6 (lower is better) Translates to: GRVPGQGWLQTELCI*LLSSVLAACRHAGC Trigger: GCATCCGGCATGTCGACAGGCAGCCAGGACTGAAGACAAGAGCAAGATGCACAGCTCTGTTTGCAGCCAGCCCTGCCCGGGCACCCTGCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000101280.10 ENSMUST00000129347.8 ENSMUST00000130233.8 |
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| CDS TCA 72 bp | GGTAGTGCTTCTCTCCGGCCTCTAGCACCCGGCCCGTaGTGTACTTCTCACAGCCGTCGCAGCGGATGCCAA | + |
|
Preference number: 6 (lower is better) Translates to: GSASLRPLAPGP*CTSHSRRSGCQ Trigger: TTGGCATCCGCTGCGACGGCTGTGAGAAGTACATCACGGGCCGGGTGCTAGAGGCCGGAGAGAAGCACTACC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 ENSMUST00000129347.8 |
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| CDS TCA 72 bp | GCCAAGCTTTGCGTAGATCACACGGCTCGGGGACCCTaGCGTGCTGGAGGCAGGCACGGAGACAATGCTCTC | + |
|
Preference number: 6 (lower is better) Translates to: AKLCVDHTARGP*RAGGRHGDNAL Trigger: GAGAGCATTGTCTCCGTGCCTGCCTCCAGCACGTCAGGGTCCCCGAGCCGTGTGATCTACGCAAAGCTTGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 11 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114203.8 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 ENSMUST00000129347.8 ENSMUST00000130233.8 ENSMUST00000151322.8 ENSMUST00000151636.8 |
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| CDS GCA 72 bp | GCTTTGCGTAGATCACACGGCTCGGGGACCCTGACGTaGTGGAGGCAGGCACGGAGACAATGCTCTCCGAAG | + |
|
Preference number: 6 (lower is better) Translates to: ALRRSHGSGTLT*WRQARRQCSPK Trigger: CTTCGGAGAGCATTGTCTCCGTGCCTGCCTCCAGCACGTCAGGGTCCCCGAGCCGTGTGATCTACGCAAAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 11 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114203.8 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 ENSMUST00000129347.8 ENSMUST00000130233.8 ENSMUST00000151322.8 ENSMUST00000151636.8 |
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| CDS GCA 72 bp | GAGGTCTGCTGTCGGAGTGCACTGAGAGACTCGGGGTaGTACGGCCACTTTCGCTGCCTCGGAAGTAGGGGA | + |
|
Preference number: 6 (lower is better) Translates to: EVCCRSALRDSG*YGHFRCLGSRG Trigger: TCCCCTACTTCCGAGGCAGCGAAAGTGGCCGTAGCACCCCGAGTCTCTCAGTGCACTCCGACAGCAGACCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114206.9 ENSMUST00000114210.9 ENSMUST00000125378.2 ENSMUST00000129347.8 |
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| CDS GCA 72 bp | CTCAGCCCTGCCCATCTCTTGGAGCGCCCTGCCTCCTaGACCACCAAGGACAAAACTGACACCAGGCCAGAG | + |
|
Preference number: 6 (lower is better) Translates to: LSPAHLLERPAS*TTKDKTDTRPE Trigger: CTCTGGCCTGGTGTCAGTTTTGTCCTTGGTGGTGCAGGAGGCAGGGCGCTCCAAGAGATGGGCAGGGCTGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151322.8 |
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| CDS CCA 72 bp | AGGCAGGCACGGAGACAATGCTCTCCGAAGAAGTCCTaGTTTCCTGTAAGGCACAGGGCAGGGTGCCCGGGC | + |
|
Preference number: 6 (lower is better) Translates to: RQARRQCSPKKS*FPVRHRAGCPG Trigger: GCCCGGGCACCCTGCCCTGTGCCTTACAGGAAACCAGGACTTCTTCGGAGAGCATTGTCTCCGTGCCTGCCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000101280.10 ENSMUST00000129347.8 ENSMUST00000130233.8 |
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| CDS CCA 72 bp | CCTGGTCAAAGCTGCTGTCCTCCACGTCCAATCGCCTaGCAGCTGGGACGTGGAAGTGTCTCGGAGCCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: PGQSCCPPRPIA*QLGRGSVSEPA Trigger: AGCAGGCTCCGAGACACTTCCACGTCCCAGCTGCCAGGCGATTGGACGTGGAGGACAGCAGCTTTGACCAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101280.10 |
||
| CDS CCA 72 bp | CCTGGTCAAAGCTGCTGTCCTCCACGTCCAATCGCCTaGCAGCTGGACGACTGTAGTGCTGGGGTGACCGTG | + |
|
Preference number: 6 (lower is better) Translates to: PGQSCCPPRPIA*QLDDCSAGVTV Trigger: CACGGTCACCCCAGCACTACAGTCGTCCAGCTGCCAGGCGATTGGACGTGGAGGACAGCAGCTTTGACCAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151636.8 |
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| CDS CAA 90 bp | GTGCCCGGGCAGGGCTGGCTGCAAACAGAGCTGTGCATCTTGCTCTaGTCTTCAGTCCTGGCTGCCTGTCGACATGCCGGATGCCAGATG | + |
|
Preference number: 6 (lower is better) Translates to: VPGQGWLQTELCILL*SSVLAACRHAGCQM Trigger: CATCTGGCATCCGGCATGTCGACAGGCAGCCAGGACTGAAGACAAGAGCAAGATGCACAGCTCTGTTTGCAGCCAGCCCTGCCCGGGCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000101280.10 ENSMUST00000129347.8 ENSMUST00000130233.8 |
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| CDS TCA 72 bp | GTAGGTAGAGGAAGGAGGTCTGCTGTCGGAGTGCACTaGGAGACTCGGGGTGCTACGGCCACTTTCGCTGCC | + |
|
Preference number: 6 (lower is better) Translates to: VGRGRRSAVGVH*ETRGATATFAA Trigger: GGCAGCGAAAGTGGCCGTAGCACCCCGAGTCTCTCAGTGCACTCCGACAGCAGACCTCCTTCCTCTACCTAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 ENSMUST00000125378.2 ENSMUST00000129347.8 |
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| CDS GCA 72 bp | GAGGTCTGCTGTCGGAGTGCACTGAGAGACTCGGGGTaGTACGGCCACTTTCGCTGCCTGGACGACTGTAGT | + |
|
Preference number: 6 (lower is better) Translates to: EVCCRSALRDSG*YGHFRCLDDCS Trigger: ACTACAGTCGTCCAGGCAGCGAAAGTGGCCGTAGCACCCCGAGTCTCTCAGTGCACTCCGACAGCAGACCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054598.12 ENSMUST00000114205.8 |
||
| CDS GCA 72 bp | AGGGTGCCCGGGCAGGGCTGGCTGCAAACAGAGCTGTaGATCTTGCTCTTGTCTTCAGTCCTGGCTGCCTGT | + |
|
Preference number: 6 (lower is better) Translates to: RVPGQGWLQTEL*ILLLSSVLAAC Trigger: ACAGGCAGCCAGGACTGAAGACAAGAGCAAGATGCACAGCTCTGTTTGCAGCCAGCCCTGCCCGGGCACCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000101280.10 ENSMUST00000129347.8 ENSMUST00000130233.8 |
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| CDS CCA 72 bp | TTGCGTAGATCACACGGCTCGGGGACCCTGACGTGCTaGAGGCAGGCACGGAGACAATGCTCTCCGAAGAAG | + |
|
Preference number: 6 (lower is better) Translates to: LRRSHGSGTLTC*RQARRQCSPKK Trigger: CTTCTTCGGAGAGCATTGTCTCCGTGCCTGCCTCCAGCACGTCAGGGTCCCCGAGCCGTGTGATCTACGCAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 11 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114203.8 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 ENSMUST00000129347.8 ENSMUST00000130233.8 ENSMUST00000151322.8 ENSMUST00000151636.8 |
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| CDS TCA 72 bp | GTGGGGAACACTTCTGGCACATACACTCCTTCCCGTTaGAGGTCACACGGTCCCCAGGAGGAAAGGGCAGCC | + |
|
Preference number: 6 (lower is better) Translates to: VGNTSGTYTPSR*RSHGPQEERAA Trigger: GGCTGCCCTTTCCTCCTGGGGACCGTGTGACCTTCAACGGGAAGGAGTGTATGTGCCAGAAGTGTTCCCCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 ENSMUST00000129347.8 |
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| CDS GCA 72 bp | GCCTGTCGACATGCCGGATGCCAGATGGAGGAGCCTTaGAGGTACATCTCCTCGCCCTCTGAGAACATCTGG | + |
|
Preference number: 6 (lower is better) Translates to: ACRHAGCQMEEP*RYISSPSENIW Trigger: CCAGATGTTCTCAGAGGGCGAGGAGATGTACCTGCAAGGCTCCTCCATCTGGCATCCGGCATGTCGACAGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 ENSMUST00000129347.8 ENSMUST00000150146.2 |
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| CDS GCA 72 bp | GCCAGGTTGTCTTCTTCCTGCTGTCCTGGTCAAAGCTaGTGTCCTCCACGTCCAATCGCCTGGCAGCGTGCT | + |
|
Preference number: 6 (lower is better) Translates to: ARLSSSCCPGQS*CPPRPIAWQRA Trigger: AGCACGCTGCCAGGCGATTGGACGTGGAGGACAGCAGCTTTGACCAGGACAGCAGGAAGAAGACAACCTGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000054598.12 ENSMUST00000114203.8 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 ENSMUST00000125378.2 ENSMUST00000129347.8 |
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| CDS GCA 72 bp | CCGGGCAGGGCTGGCTGCAAACAGAGCTGTGCATCTTaGTCTTGTCTTCAGTCCTGGCTGCCTGTCGACATG | + |
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Preference number: 6 (lower is better) Translates to: PGRAGCKQSCAS*SCLQSWLPVDM Trigger: CATGTCGACAGGCAGCCAGGACTGAAGACAAGAGCAAGATGCACAGCTCTGTTTGCAGCCAGCCCTGCCCGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000101280.10 ENSMUST00000129347.8 ENSMUST00000130233.8 |
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| CDS GCA 72 bp | GGGACCCTGACGTGCTGGAGGCAGGCACGGAGACAATaGTCTCCGAAGAAGTCCTGGTTTCCTGTAAGGCAC | + |
|
Preference number: 6 (lower is better) Translates to: GTLTCWRQARRQ*SPKKSWFPVRH Trigger: GTGCCTTACAGGAAACCAGGACTTCTTCGGAGAGCATTGTCTCCGTGCCTGCCTCCAGCACGTCAGGGTCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000101280.10 ENSMUST00000129347.8 ENSMUST00000130233.8 |
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| CDS GCA 72 bp | GCCAGGTTGTCTTCTTCCTGCTGTCCTGGTCAAAGCTaGTGTCCTCCACGTCCAATCGCCTGGCAGCTGGGA | + |
|
Preference number: 6 (lower is better) Translates to: ARLSSSCCPGQS*CPPRPIAWQLG Trigger: TCCCAGCTGCCAGGCGATTGGACGTGGAGGACAGCAGCTTTGACCAGGACAGCAGGAAGAAGACAACCTGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101280.10 |
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| CDS GCA 72 bp | GCCAGGTTGTCTTCTTCCTGCTGTCCTGGTCAAAGCTaGTGTCCTCCACGTCCAATCGCCTGGCAGCTGGAC | + |
|
Preference number: 6 (lower is better) Translates to: ARLSSSCCPGQS*CPPRPIAWQLD Trigger: GTCCAGCTGCCAGGCGATTGGACGTGGAGGACAGCAGCTTTGACCAGGACAGCAGGAAGAAGACAACCTGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151636.8 |
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| CDS GCA 72 bp | GCCAGGTTGTCTTCTTCCTGCTGTCCTGGTCAAAGCTaGTGTCCTCCACGTCCAATCGCCTGGCAGCTGCAG | + |
|
Preference number: 6 (lower is better) Translates to: ARLSSSCCPGQS*CPPRPIAWQLQ Trigger: CTGCAGCTGCCAGGCGATTGGACGTGGAGGACAGCAGCTTTGACCAGGACAGCAGGAAGAAGACAACCTGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151322.8 |
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| CDS CCA 72 bp | ACACATTCCCACAGGTATTACACAGGATCGCAGTGCTaGCCGGCTTCTCCAGTGGGGCATGAGCAGCCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: THSHRYYTGSQC*PASPVGHEQPG Trigger: CCCAGGCTGCTCATGCCCCACTGGAGAAGCCGGCCAGCACTGCGATCCTGTGTAATACCTGTGGGAATGTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 ENSMUST00000129347.8 |
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| CDS CCA 72 bp | CCTTGCAGGTACATCTCCTCGCCCTCTGAGAACATCTaGCCGCACCTGACGCATAGCGCACATGAAGGGTGG | + |
|
Preference number: 6 (lower is better) Translates to: PCRYISSPSENI*PHLTHSAHEGW Trigger: CCACCCTTCATGTGCGCTATGCGTCAGGTGCGGCCAGATGTTCTCAGAGGGCGAGGAGATGTACCTGCAAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 ENSMUST00000129347.8 |
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| CDS CAA 72 bp | GGTGGGGAACACTTCTGGCACATACACTCCTTCCCGTaGAAGGTCACACGGTCCCCAGGAGGAAAGGGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: GGEHFWHIHSFP*KVTRSPGGKGS Trigger: GCTGCCCTTTCCTCCTGGGGACCGTGTGACCTTCAACGGGAAGGAGTGTATGTGCCAGAAGTGTTCCCCACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 ENSMUST00000129347.8 |
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| CDS CAA 72 bp | CCCGGGCAGGGCTGGCTGCAAACAGAGCTGTGCATCTaGCTCTTGTCTTCAGTCCTGGCTGCCTGTCGACAT | + |
|
Preference number: 6 (lower is better) Translates to: PGQGWLQTELCI*LLSSVLAACRH Trigger: ATGTCGACAGGCAGCCAGGACTGAAGACAAGAGCAAGATGCACAGCTCTGTTTGCAGCCAGCCCTGCCCGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000101280.10 ENSMUST00000129347.8 ENSMUST00000130233.8 |
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| CDS CAA 90 bp | AGCAATGTGGGTGGGGAACACTTCTGGCACATACACTCCTTCCCGTaGAAGGTCACACGGTCCCCAGGAGGAAAGGGCAGCCTGCAGACA | + |
|
Preference number: 6 (lower is better) Translates to: SNVGGEHFWHIHSFP*KVTRSPGGKGSLQT Trigger: TGTCTGCAGGCTGCCCTTTCCTCCTGGGGACCGTGTGACCTTCAACGGGAAGGAGTGTATGTGCCAGAAGTGTTCCCCACCCACATTGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 ENSMUST00000129347.8 |
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| CDS TCA 72 bp | AGTGCTTGTCCAAAGCCACCAGGGCCTGGCCATTCTTaGTTTCTAAGCCACAGCCCCCACAACTCCGGAGGC | + |
|
Preference number: 6 (lower is better) Translates to: SACPKPPGPGHS*FLSHSPHNSGG Trigger: GCCTCCGGAGTTGTGGGGGCTGTGGCTTAGAAATCAAGAATGGCCAGGCCCTGGTGGCTTTGGACAAGCACT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 ENSMUST00000129347.8 |
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| CDS TCA 72 bp | GGTTCCTGGTCAGTCCCGCTGCTGAGGGACAGCGACTaGCTGTCCAGGTCTGGAGAGTTAGTTCTGGTGTCT | + |
|
Preference number: 6 (lower is better) Translates to: GSWSVPLLRDSD*LSRSGELVLVS Trigger: AGACACCAGAACTAACTCTCCAGACCTGGACAGTCAGTCGCTGTCCCTCAGCAGCGGGACTGACCAGGAACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114203.8 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 ENSMUST00000125378.2 ENSMUST00000129347.8 ENSMUST00000151636.8 |
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| CDS TCA 72 bp | CCATTCTTTGGAGAGGTTCCTGGTCAGTCCCGCTGCTaGGGGACAGCGACTGACTGTCCAGGTCTGGAGAGT | + |
|
Preference number: 6 (lower is better) Translates to: PFFGEVPGQSRC*GTATDCPGLES Trigger: ACTCTCCAGACCTGGACAGTCAGTCGCTGTCCCTCAGCAGCGGGACTGACCAGGAACCTCTCCAAAGAATGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114203.8 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 ENSMUST00000125378.2 ENSMUST00000129347.8 ENSMUST00000151636.8 |
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| CDS GCA 72 bp | TGCACACATTCCCACAGGTATTACACAGGATCGCAGTaGTGGCCGGCTTCTCCAGTGGGGCATGAGCAGCCT | + |
|
Preference number: 6 (lower is better) Translates to: CTHSHRYYTGSQ*WPASPVGHEQP Trigger: AGGCTGCTCATGCCCCACTGGAGAAGCCGGCCAGCACTGCGATCCTGTGTAATACCTGTGGGAATGTGTGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 ENSMUST00000129347.8 |
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| CDS GCA 72 bp | TTGTCTTCAGTCCTGGCTGCCTGTCGACATGCCGGATaGCAGATGGAGGAGCCTTGCAGGTACATCTCCTCG | + |
|
Preference number: 6 (lower is better) Translates to: LSSVLAACRHAG*QMEEPCRYISS Trigger: CGAGGAGATGTACCTGCAAGGCTCCTCCATCTGGCATCCGGCATGTCGACAGGCAGCCAGGACTGAAGACAA 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114203.8 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 ENSMUST00000129347.8 ENSMUST00000130233.8 |
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| CDS CCA 72 bp | CTGGGCCACGTGAGCACTGTTGCCCAGCAATGTGGGTaGGGAACACTTCTGGCACATACACTCCTTCCCGTT | + |
|
Preference number: 6 (lower is better) Translates to: LGHVSTVAQQCG*GTLLAHTLLPV Trigger: AACGGGAAGGAGTGTATGTGCCAGAAGTGTTCCCCACCCACATTGCTGGGCAACAGTGCTCACGTGGCCCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 ENSMUST00000129347.8 |
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| CDS CCA 72 bp | CATAGGGATATATCTTATACTCTCGCGTGCCCCAGCTaGCATCCGGGTCTGCTCCACAAGGGGCCAGGTTGG | + |
|
Preference number: 6 (lower is better) Translates to: HRDISYTLACPS*HPGLLHKGPGW Trigger: CCAACCTGGCCCCTTGTGGAGCAGACCCGGATGCCAGCTGGGGCACGCGAGAGTATAAGATATATCCCTATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000054598.12 ENSMUST00000114203.8 ENSMUST00000129347.8 |
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| CDS CCA 72 bp | CCACCAAGGACAAAACTGACACCAGGCCAGAGAGCTTaGACATTGGGGACTGGGCTACAGGACCTGGACGAC | + |
|
Preference number: 6 (lower is better) Translates to: PPRTKLTPGQRA*TLGTGLQDLDD Trigger: GTCGTCCAGGTCCTGTAGCCCAGTCCCCAATGTCCAAGCTCTCTGGCCTGGTGTCAGTTTTGTCCTTGGTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151322.8 |
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| CDS CAA 72 bp | CAGTGCTTGTCCAAAGCCACCAGGGCCTGGCCATTCTaGATTTCTAAGCCACAGCCCCCACAACTCCGGAGG | + |
|
Preference number: 6 (lower is better) Translates to: QCLSKATRAWPF*ISKPQPPQLRR Trigger: CCTCCGGAGTTGTGGGGGCTGTGGCTTAGAAATCAAGAATGGCCAGGCCCTGGTGGCTTTGGACAAGCACTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 ENSMUST00000129347.8 |
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| CDS CAA 90 bp | GGCACGGAGACAATGCTCTCCGAAGAAGTCCTGGTTTCCTTGCTCTaGTCTTCAGTCCTGGCTGCCTGTCGACATGCCGGATGCCAGATG | + |
|
Preference number: 6 (lower is better) Translates to: GTETMLSEEVLVSLL*SSVLAACRHAGCQM Trigger: CATCTGGCATCCGGCATGTCGACAGGCAGCCAGGACTGAAGACAAGAGCAAGGAAACCAGGACTTCTTCGGAGAGCATTGTCTCCGTGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000054598.12 ENSMUST00000114203.8 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 ENSMUST00000151636.8 |
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| CDS GCA 72 bp | TGTACTTCTCACAGCCGTCGCAGCGGATGCCAAACTTaGTGTGATAATCAGCCTCGCAGTAGGGCAGCCCGT | + |
|
Preference number: 6 (lower is better) Translates to: CTSHSRRSGCQT*CDNQPRSRAAR Trigger: ACGGGCTGCCCTACTGCGAGGCTGATTATCACAGCAAGTTTGGCATCCGCTGCGACGGCTGTGAGAAGTACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 ENSMUST00000129347.8 |
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| CDS GCA 72 bp | CTTGCTCTTGTCTTCAGTCCTGGCTGCCTGTCGACATaGCGGATGCCAGATGGAGGAGCCTTGCAGGTACAT | + |
|
Preference number: 6 (lower is better) Translates to: LALVFSPGCLST*RMPDGGALQVH Trigger: ATGTACCTGCAAGGCTCCTCCATCTGGCATCCGGCATGTCGACAGGCAGCCAGGACTGAAGACAAGAGCAAG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114203.8 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 ENSMUST00000129347.8 ENSMUST00000130233.8 |
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| CDS CCA 72 bp | GCACTGTTGCCCAGCAATGTGGGTGGGGAACACTTCTaGCACATACACTCCTTCCCGTTGAAGGTCACACGG | + |
|
Preference number: 6 (lower is better) Translates to: ALLPSNVGGEHF*HIHSFPLKVTR Trigger: CCGTGTGACCTTCAACGGGAAGGAGTGTATGTGCCAGAAGTGTTCCCCACCCACATTGCTGGGCAACAGTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 ENSMUST00000129347.8 |
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| CDS CAA 72 bp | ACCACCAAGGACAAAACTGACACCAGGCCAGAGAGCTaGGACATTGGGGACTGGGCTACAGGACCTGGACGA | + |
|
Preference number: 6 (lower is better) Translates to: TTKDKTDTRPES*DIGDWATGPGR Trigger: TCGTCCAGGTCCTGTAGCCCAGTCCCCAATGTCCAAGCTCTCTGGCCTGGTGTCAGTTTTGTCCTTGGTGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151322.8 |
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| CDS CCA 72 bp | AAGAAGTCCTGGTTTCCTTGCTCTTGTCTTCAGTCCTaGCTGCCTGTCGACATGCCGGATGCCAGATGGAGG | + |
|
Preference number: 6 (lower is better) Translates to: KKSWFPCSCLQS*LPVDMPDARWR Trigger: CCTCCATCTGGCATCCGGCATGTCGACAGGCAGCCAGGACTGAAGACAAGAGCAAGGAAACCAGGACTTCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000054598.12 ENSMUST00000114203.8 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 ENSMUST00000151636.8 |
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| CDS CCA 72 bp | AGGCAGGCACGGAGACAATGCTCTCCGAAGAAGTCCTaGTTTCCTTGCTCTTGTCTTCAGTCCTGGCTGCCT | + |
|
Preference number: 6 (lower is better) Translates to: RQARRQCSPKKS*FPCSCLQSWLP Trigger: AGGCAGCCAGGACTGAAGACAAGAGCAAGGAAACCAGGACTTCTTCGGAGAGCATTGTCTCCGTGCCTGCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000054598.12 ENSMUST00000114203.8 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 ENSMUST00000151636.8 |
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| CDS CCA 72 bp | CCAGGTTGGCATTCCGGAGGTCCAGGCCATCCTTCCTaGGTCCTGGAAGAGTGTCAGGTTTGGAATAAGGAA | + |
|
Preference number: 6 (lower is better) Translates to: PGWHSGGPGHPS*VLEECQVWNKE Trigger: TTCCTTATTCCAAACCTGACACTCTTCCAGGACCCAGGAAGGATGGCCTGGACCTCCGGAATGCCAACCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054598.12 ENSMUST00000114203.8 ENSMUST00000129347.8 |
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| CDS CCA 72 bp | AAACAGAGCTGTGCATCTTGCTCTTGTCTTCAGTCCTaGCTGCCTGTCGACATGCCGGATGCCAGATGGAGG | + |
|
Preference number: 6 (lower is better) Translates to: KQSCASCSCLQS*LPVDMPDARWR Trigger: CCTCCATCTGGCATCCGGCATGTCGACAGGCAGCCAGGACTGAAGACAAGAGCAAGATGCACAGCTCTGTTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000101280.10 ENSMUST00000129347.8 ENSMUST00000130233.8 |
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| CDS CCA 72 bp | AGGCAGGCACGGAGACAATGCTCTCCGAAGAAGTCCTaGTTTCCTTGCTCTTGTCTTCAGTCCTGGCTGCCN | + |
|
Preference number: 6 (lower is better) Translates to: RQARRQCSPKKS*FPCSCLQSWLP Trigger: NGGCAGCCAGGACTGAAGACAAGAGCAAGGAAACCAGGACTTCTTCGGAGAGCATTGTCTCCGTGCCTGCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151322.8 |
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| CDS CAA 72 bp | AGGACAAAACTGACACCAGGCCAGAGAGCTTGGACATaGGGGACTGGGCTACAGGACCTGGACGACTGTAGT | + |
|
Preference number: 6 (lower is better) Translates to: RTKLTPGQRAWT*GTGLQDLDDCS Trigger: ACTACAGTCGTCCAGGTCCTGTAGCCCAGTCCCCAATGTCCAAGCTCTCTGGCCTGGTGTCAGTTTTGTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151322.8 |
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| CDS GCA 72 bp | CGGAGACAATGCTCTCCGAAGAAGTCCTGGTTTCCTTaGTCTTGTCTTCAGTCCTGGCTGCCTGTCGACATG | + |
|
Preference number: 6 (lower is better) Translates to: RRQCSPKKSWFP*SCLQSWLPVDM Trigger: CATGTCGACAGGCAGCCAGGACTGAAGACAAGAGCAAGGAAACCAGGACTTCTTCGGAGAGCATTGTCTCCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000054598.12 ENSMUST00000114203.8 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 ENSMUST00000151636.8 |
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| CDS GCA 72 bp | GGAAGTACTTGTTCTGCACACGCAGCACCTCTCCCTTaGACACATTCCCACAGGTATTACACAGGATCGCAG | + |
|
Preference number: 6 (lower is better) Translates to: GSTCSAHAAPLP*THSHRYYTGSQ Trigger: CTGCGATCCTGTGTAATACCTGTGGGAATGTGTGCAAGGGAGAGGTGCTGCGTGTGCAGAACAAGTACTTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 ENSMUST00000129347.8 |
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| CDS TCA 72 bp | TCCTGGAAGAGTGTCAGGTTTGGAATAAGGAAAGCGTaGGTAGAGGCTGTCCCCTGCCATTCTTTGGAGAGG | + |
|
Preference number: 6 (lower is better) Translates to: SWKSVRFGIRKA*VEAVPCHSLER Trigger: CCTCTCCAAAGAATGGCAGGGGACAGCCTCTACTCACGCTTTCCTTATTCCAAACCTGACACTCTTCCAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000054598.12 ENSMUST00000114203.8 ENSMUST00000129347.8 ENSMUST00000153529.2 |
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| CDS CCA 72 bp | CATAGGGATATATCCGGAGGTCCAGGCCATCCTTCCTaGGTCCTGGAAGAGTGTCAGGTTTGGAATAAGGAA | + |
|
Preference number: 6 (lower is better) Translates to: HRDISGGPGHPS*VLEECQVWNKE Trigger: TTCCTTATTCCAAACCTGACACTCTTCCAGGACCCAGGAAGGATGGCCTGGACCTCCGGATATATCCCTATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153529.2 |
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| CDS CAA 72 bp | TACTCTGCATTGAGGAGTTTCCCACAAGTCTTGCACTaGAAGCATCCCAGGTGCCAGTGCTTGTCCAAAGCC | + |
|
Preference number: 6 (lower is better) Translates to: YSALRSFPQVLH*KHPRCQCLSKA Trigger: GGCTTTGGACAAGCACTGGCACCTGGGATGCTTCAAGTGCAAGACTTGTGGGAAACTCCTCAATGCAGAGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000054598.12 ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 ENSMUST00000114210.9 ENSMUST00000129347.8 |
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| CDS TCA 72 bp | CTTTGGGCAGTTTCACACGAATTCGGTTTGTTACGATaGGGGAATCATAGGGATATATCCGGAGGTCCAGGC | + |
|
Preference number: 6 (lower is better) Translates to: LWAVSHEFGLLR*GNHRDISGGPG Trigger: GCCTGGACCTCCGGATATATCCCTATGATTCCCTCATCGTAACAAACCGAATTCGTGTGAAACTGCCCAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153529.2 |
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| CDS TCA 72 bp | CTTTGGGCAGTTTCACACGAATTCGGTTTGTTACGATaGGGGAATCATAGGGATATATCTTATACTCTCGCG | + |
|
Preference number: 6 (lower is better) Translates to: LWAVSHEFGLLR*GNHRDISYTLA Trigger: CGCGAGAGTATAAGATATATCCCTATGATTCCCTCATCGTAACAAACCGAATTCGTGTGAAACTGCCCAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054598.12 ENSMUST00000114203.8 ENSMUST00000129347.8 |
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| CDS TCA 72 bp | CTTTGGGCAGTTTCACACGAATTCGGTTTGTTACGATaGGGGAATCATAGGGATATATCTTATACTGTGAGT | + |
|
Preference number: 6 (lower is better) Translates to: LWAVSHEFGLLR*GNHRDISYTVS Trigger: ACTCACAGTATAAGATATATCCCTATGATTCCCTCATCGTAACAAACCGAATTCGTGTGAAACTGCCCAAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000101280.10 ENSMUST00000114204.8 ENSMUST00000114205.8 ENSMUST00000114206.9 |
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