Pregenerated sensors for ABITRAM (Mus musculus)
Ensembl gene IDs: ENSMUSG00000038827Ensembl transcript IDs: ENSMUST00000045368.12, ENSMUST00000131520.8, ENSMUST00000147763.2
Found 170 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TTGGGGGCAGGCTTTGTGTTTACAGCCAAGGTCTACTTCACTGTGTaGTCCCAGGGTGTGCTGATGTGTGGTCTTGCAGCTTCTTGTGCC | + |
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Preference number: 1 (lower is better) Translates to: LGAGFVFTAKVYFTV*SQGVLMCGLAASCA Trigger: GGCACAAGAAGCTGCAAGACCACACATCAGCACACCCTGGGAGCACACAGTGAAGTAGACCTTGGCTGTAAACACAAAGCCTGCCCCCAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045368.12 ENSMUST00000131520.8 |
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| 3UTR TCA 90 bp | GACATCTGCCAAGGAAGAGCTGCACAGAGCAGAATCACCAGAGAATaGTCTGTTACAGGCAGCAGTGTGGACGGGTCAGAGGCATCTCAG | + |
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Preference number: 1 (lower is better) Translates to: DICQGRAAQSRITRE*SVTGSSVDGSEASQ Trigger: CTGAGATGCCTCTGACCCGTCCACACTGCTGCCTGTAACAGATCATTCTCTGGTGATTCTGCTCTGTGCAGCTCTTCCTTGGCAGATGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045368.12 ENSMUST00000131520.8 |
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| 3UTR TCA 90 bp | TGTTTACAGCCAAGGTCTACTTCACTGTGTGCTCCCAGGGTGTGCTaGTGTGTGGTCTTGCAGCTTCTTGTGCCTGCTGCCATGAGCATC | + |
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Preference number: 1 (lower is better) Translates to: CLQPRSTSLCAPRVC*CVVLQLLVPAAMSI Trigger: GATGCTCATGGCAGCAGGCACAAGAAGCTGCAAGACCACACATCAGCACACCCTGGGAGCACACAGTGAAGTAGACCTTGGCTGTAAACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045368.12 ENSMUST00000131520.8 |
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| 3UTR CCA 90 bp | AAGGAGGGCATGGTGGTGTGTACTTGTAATACCAGCCTGGGAAGGTaGGAGGCAGAGAACACAGGTACCTCCCTGGAAGTACATGAGCTA | + |
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Preference number: 1 (lower is better) Translates to: KEGMVVCTCNTSLGR*EAENTGTSLEVHEL Trigger: TAGCTCATGTACTTCCAGGGAGGTACCTGTGTTCTCTGCCTCCCACCTTCCCAGGCTGGTATTACAAGTACACACCACCATGCCCTCCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045368.12 ENSMUST00000131520.8 |
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| 3UTR CCA 90 bp | CCTGTTTATAACCTCATTCTCCTTCCAGTTCACCAAGAGCAGTCTTaGTGTGTGGTAGGGATGGGATCTCTTAGCTTCCTGCCCTGGCTA | + |
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Preference number: 1 (lower is better) Translates to: PVYNLILLPVHQEQS*CVVGMGSLSFLPWL Trigger: TAGCCAGGGCAGGAAGCTAAGAGATCCCATCCCTACCACACACCAAGACTGCTCTTGGTGAACTGGAAGGAGAATGAGGTTATAAACAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045368.12 ENSMUST00000131520.8 |
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| 3UTR GCA 90 bp | AAGAACCTGGCTGTTCGCTTGGAGAAAGCACCACCATACAAGAGCTaGCGTGGACGTGAAAGGCACTGTAAGCTGACAGTCTATTTTTCA | + |
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Preference number: 1 (lower is better) Translates to: KNLAVRLEKAPPYKS*RGRERHCKLTVYFS Trigger: TGAAAAATAGACTGTCAGCTTACAGTGCCTTTCACGTCCACGGCAGCTCTTGTATGGTGGTGCTTTCTCCAAGCGAACAGCCAGGTTCTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045368.12 ENSMUST00000131520.8 |
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| 3UTR TCA 90 bp | ATTTGGGTTGTGGCACAAATCCCAAGACACTGGAAATACAAGTTGTaGGACATCTGCCAAGGAAGAGCTGCACAGAGCAGAATCACCAGA | + |
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Preference number: 1 (lower is better) Translates to: IWVVAQIPRHWKYKL*DICQGRAAQSRITR Trigger: TCTGGTGATTCTGCTCTGTGCAGCTCTTCCTTGGCAGATGTCTCACAACTTGTATTTCCAGTGTCTTGGGATTTGTGCCACAACCCAAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045368.12 ENSMUST00000131520.8 |
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| 3UTR GCA 90 bp | AAGACACTGGAAATACAAGTTGTGAGACATCTGCCAAGGAAGAGCTaGACAGAGCAGAATCACCAGAGAATGATCTGTTACAGGCAGCAG | + |
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Preference number: 1 (lower is better) Translates to: KTLEIQVVRHLPRKS*TEQNHQRMICYRQQ Trigger: CTGCTGCCTGTAACAGATCATTCTCTGGTGATTCTGCTCTGTGCAGCTCTTCCTTGGCAGATGTCTCACAACTTGTATTTCCAGTGTCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045368.12 ENSMUST00000131520.8 |
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| 3UTR CCA 90 bp | CCAAAGCTGCAGGACCTCCATGACACAGAGCAACAACAGAATAACTaGGAGGAGTCCCGAGGAGGATGCAATATATCTTTTTGGTTTTTC | + |
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Preference number: 1 (lower is better) Translates to: PKLQDLHDTEQQQNN*EESRGGCNISFWFF Trigger: GAAAAACCAAAAAGATATATTGCATCCTCCTCGGGACTCCTCCCAGTTATTCTGTTGTTGCTCTGTGTCATGGAGGTCCTGCAGCTTTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000045368.12 ENSMUST00000131520.8 |
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| 3UTR TCA 90 bp | GATGCAAGAATGAAAAGTGGATTCTTCCTGGCTTCAGAAAGTCACTaGGGAAACATGTGGCAGAGACAGAGTTTCTGCAAGGCCATGAGA | + |
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Preference number: 1 (lower is better) Translates to: DARMKSGFFLASESH*GNMWQRQSFCKAMR Trigger: TCTCATGGCCTTGCAGAAACTCTGTCTCTGCCACATGTTTCCTCAGTGACTTTCTGAAGCCAGGAAGAATCCACTTTTCATTCTTGCATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045368.12 ENSMUST00000131520.8 |
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| 3UTR TCA 90 bp | TGGAAGTTGGTCAAGGAGAGAATCCTTTCAGATAAACCTCCACTCTaGAAGACAGCATTAAGAACCTGGCTGTTCGCTTGGAGAAAGCAC | + |
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Preference number: 1 (lower is better) Translates to: WKLVKERILSDKPPL*KTALRTWLFAWRKH Trigger: GTGCTTTCTCCAAGCGAACAGCCAGGTTCTTAATGCTGTCTTTCAGAGTGGAGGTTTATCTGAAAGGATTCTCTCCTTGACCAACTTCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045368.12 ENSMUST00000131520.8 |
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| 3UTR CCA 90 bp | GCCATGAGAGGCCACTGTGAAGCTGTCAAGGTAAAATTTGGGTTGTaGCACAAATCCCAAGACACTGGAAATACAAGTTGTGAGACATCT | + |
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Preference number: 1 (lower is better) Translates to: AMRGHCEAVKVKFGL*HKSQDTGNTSCETS Trigger: AGATGTCTCACAACTTGTATTTCCAGTGTCTTGGGATTTGTGCCACAACCCAAATTTTACCTTGACAGCTTCACAGTGGCCTCTCATGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045368.12 ENSMUST00000131520.8 |
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| 3UTR CCA 90 bp | TGTGGAACAGCACTTGCTGTTTTAAGCCTAGAAGACTATAGTGCTTaGAATAATATTGACAGTAGAGGCCCTGGCTCCTGGGGCTTTAGA | + |
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Preference number: 1 (lower is better) Translates to: CGTALAVLSLEDYSA*NNIDSRGPGSWGFR Trigger: TCTAAAGCCCCAGGAGCCAGGGCCTCTACTGTCAATATTATTCCAAGCACTATAGTCTTCTAGGCTTAAAACAGCAAGTGCTGTTCCACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045368.12 ENSMUST00000131520.8 |
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| 3UTR TCA 90 bp | AAATGTGGAACTCTGGAACTTTGGACCAGAAAAATGGGTGAATGCTaGGAGCACTGTGGAACAGCACTTGCTGTTTTAAGCCTAGAAGAC | + |
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Preference number: 1 (lower is better) Translates to: KCGTLELWTRKMGEC*EHCGTALAVLSLED Trigger: GTCTTCTAGGCTTAAAACAGCAAGTGCTGTTCCACAGTGCTCTCAGCATTCACCCATTTTTCTGGTCCAAAGTTCCAGAGTTCCACATTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000045368.12 ENSMUST00000131520.8 |
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| 3UTR GCA 90 bp | ATGGTGTCACAAAGTCAGAGATCTCGAACCAGACCAACCATTCACTaGAATGAACATTTGCAAGTGAGGATGCACAGACAGACGTATAGA | + |
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Preference number: 1 (lower is better) Translates to: MVSQSQRSRTRPTIH*NEHLQVRMHRQTYR Trigger: TCTATACGTCTGTCTGTGCATCCTCACTTGCAAATGTTCATTGCAGTGAATGGTTGGTCTGGTTCGAGATCTCTGACTTTGTGACACCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045368.12 ENSMUST00000131520.8 |
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| 3UTR CCA 90 bp | CCCTTCCTTTTGGAATGGGAATGTATATTCTGTGCCATTGTGTGTTaGAAGTATGTTCCTGGCTCTCTGATTCACAGGGGAGATAAGACA | + |
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Preference number: 1 (lower is better) Translates to: PFLLEWECIFCAIVC*KYVPGSLIHRGDKT Trigger: TGTCTTATCTCCCCTGTGAATCAGAGAGCCAGGAACATACTTCCAACACACAATGGCACAGAATATACATTCCCATTCCAAAAGGAAGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045368.12 ENSMUST00000131520.8 |
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| 3UTR GCA 90 bp | ACTATGTCATCACCCCTTCCTTTTGGAATGGGAATGTATATTCTGTaGCATTGTGTGTTGGAAGTATGTTCCTGGCTCTCTGATTCACAG | + |
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Preference number: 1 (lower is better) Translates to: TMSSPLPFGMGMYIL*HCVLEVCSWLSDSQ Trigger: CTGTGAATCAGAGAGCCAGGAACATACTTCCAACACACAATGGCACAGAATATACATTCCCATTCCAAAAGGAAGGGGTGATGACATAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045368.12 ENSMUST00000131520.8 |
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| 3UTR-3UTR CCA 90 bp | GAGGCATGCCATTGGGGGCAGGCTTTGTGTTTACAGCCAAGGTCTACTTCACTGGAAGAGGTGGCCTCTTaGCCAGCTCAGCTACCGCCA | + |
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Preference number: 2 (lower is better) Translates to: EACHWGQALCLQPRSTSLEEVAS*PAQLPP Trigger: TGGCGGTAGCTGAGCTGGCCAAGAGGCCACCTCTTC...CAGTGAAGTAGACCTTGGCTGTAAACACAAAGCCTGCCCCCAATGGCATGCCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045368.12 ENSMUST00000131520.8 |
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| 3UTR-3UTR TCA 90 bp | AAGTCCCCTGGTTTGGGCAGGAGAGATGGCTCAGTGATTAAGGACAGTGACTGTCTGTCTTCAGGGCACTaGTGGGTTAGGCCGGGTAGG | + |
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Preference number: 2 (lower is better) Translates to: KSPGLGRRDGSVIKDSDCLSSGH*WVRPGR Trigger: CCTACCCGGCCTAACCCATCAGTGCCCTGAAGACAG...ACAGTCACTGTCCTTAATCACTGAGCCATCTCTCCTGCCCAAACCAGGGGACTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045368.12 ENSMUST00000131520.8 |
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| 3UTR-3UTR GCA 90 bp | GTCAGTGTAGGGCTTGCCTTCTGCTGTAGACTGGAGGAAAAGTGCCTTGGTCTCGGCGGCTGCGAGGAATaGTTCATACACACTGGCTGT | + |
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Preference number: 2 (lower is better) Translates to: VSVGLAFCCRLEEKCLGLGGCEE*FIHTGC Trigger: ACAGCCAGTGTGTATGAAGCATTCCTCGCAGCCGCC...GAGACCAAGGCACTTTTCCTCCAGTCTACAGCAGAAGGCAAGCCCTACACTGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045368.12 ENSMUST00000131520.8 |
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| 3UTR-3UTR TCA 90 bp | GGACCAGTCCTGCGGCTCCAAAGCTGCAGGACCTCCATGACACAGAGCAACAACTATAGACTTGATCAGTaGAAACAAGCACGTTGGGGG | + |
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Preference number: 2 (lower is better) Translates to: GPVLRLQSCRTSMTQSNNYRLDQ*KQARWG Trigger: CCCCCAACGTGCTTGTTTTCACTGATCAAGTCTATA...GTTGTTGCTCTGTGTCATGGAGGTCCTGCAGCTTTGGAGCCGCAGGACTGGTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045368.12 ENSMUST00000131520.8 |
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| 3UTR-3UTR CCA 90 bp | AAGTCCCCTGGTTTGGGCAGGAGAGATGGCTCAGTGATTAAGGACAGTGACTGTTTACAGGCAGCAGTGTaGACGGGTCAGAGGCATCTC | + |
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Preference number: 2 (lower is better) Translates to: KSPGLGRRDGSVIKDSDCLQAAV*TGQRHL Trigger: GAGATGCCTCTGACCCGTCCACACTGCTGCCTGTAA...ACAGTCACTGTCCTTAATCACTGAGCCATCTCTCCTGCCCAAACCAGGGGACTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045368.12 ENSMUST00000131520.8 |
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| 3UTR-3UTR GCA 90 bp | TCTCCTTCCAGTTCACCAAGAGCAGTCTTGGTGTGTGGTAGGGATGGGATCTCTGTGAACACCCACAAGTaGGCTTCCCAGCACACAAAG | + |
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Preference number: 2 (lower is better) Translates to: SPSSSPRAVLVCGRDGISVNTHK*ASQHTK Trigger: CTTTGTGTGCTGGGAAGCGCACTTGTGGGTGTTCAC...AGAGATCCCATCCCTACCACACACCAAGACTGCTCTTGGTGAACTGGAAGGAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045368.12 ENSMUST00000131520.8 |
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| 3UTR-3UTR CCA 90 bp | AAGTCCCCTGGTTTGGGCAGGAGAGATGGCTCAGTGATTAAGGACAGTGACTGTCTTGTAATACCAGCCTaGGAAGGTGGGAGGCAGAGA | + |
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Preference number: 2 (lower is better) Translates to: KSPGLGRRDGSVIKDSDCLVIPA*EGGRQR Trigger: TCTCTGCCTCCCACCTTCCCAGGCTGGTATTACAAG...ACAGTCACTGTCCTTAATCACTGAGCCATCTCTCCTGCCCAAACCAGGGGACTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045368.12 ENSMUST00000131520.8 |
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| 3UTR-3UTR TCA 90 bp | GGCAGGAGAGATGGCTCAGTGATTAAGGACAGTGACTGTTCTTCCAGAGGTTCTGCAGGTCTGAGAGCCTaGATACAGATGGGAACAAGG | + |
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Preference number: 2 (lower is better) Translates to: GRRDGSVIKDSDCSSRGSAGLRA*IQMGTR Trigger: CCTTGTTCCCATCTGTATTCAGGCTCTCAGACCTGC...AGAACCTCTGGAAGAACAGTCACTGTCCTTAATCACTGAGCCATCTCTCCTGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045368.12 ENSMUST00000131520.8 |
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| 3UTR-3UTR TCA 90 bp | ATGGGAATGTATATTCTGTGCCATTGTGTGTTGGAAGTATGTTCCTGGCTCTCTCTGTCTTCAGGGCACTaGTGGGTTAGGCCGGGTAGG | + |
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Preference number: 2 (lower is better) Translates to: MGMYILCHCVLEVCSWLSLSSGH*WVRPGR Trigger: CCTACCCGGCCTAACCCATCAGTGCCCTGAAGACAG...AGAGAGCCAGGAACATACTTCCAACACACAATGGCACAGAATATACATTCCCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045368.12 ENSMUST00000131520.8 |
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| 3UTR-3UTR TCA 90 bp | CCTGCGGCTCCAAAGCTGCAGGACCTCCATGACACAGAGCAACAACAGAATAACAGAATCACCAGAGAATaGTCTGTTACAGGCAGCAGT | + |
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Preference number: 2 (lower is better) Translates to: PAAPKLQDLHDTEQQQNNRITRE*SVTGSS Trigger: ACTGCTGCCTGTAACAGATCATTCTCTGGTGATTCT...GTTATTCTGTTGTTGCTCTGTGTCATGGAGGTCCTGCAGCTTTGGAGCCGCAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045368.12 ENSMUST00000131520.8 |
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| 3UTR-3UTR TCA 90 bp | GGCAGGAGAGATGGCTCAGTGATTAAGGACAGTGACTGTTCTTCCAGAGGTTCTGACCAGAAAAATGGGTaGATGCTGAGAGCACTGTGG | + |
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Preference number: 2 (lower is better) Translates to: GRRDGSVIKDSDCSSRGSDQKNG*MLRALW Trigger: CCACAGTGCTCTCAGCATTCACCCATTTTTCTGGTC...AGAACCTCTGGAAGAACAGTCACTGTCCTTAATCACTGAGCCATCTCTCCTGCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045368.12 ENSMUST00000131520.8 |
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| 3UTR-3UTR GCA 90 bp | AGCCTAGAAGACTATAGTGCTTGGAATAATATTGACAGTAGAGGCCCTGGCTCCAAACCCACCTGCCTCTaGCTCCTGAGTGCTGGGATT | + |
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Preference number: 2 (lower is better) Translates to: SLEDYSAWNNIDSRGPGSKPTCL*LLSAGI Trigger: AATCCCAGCACTCAGGAGGCAGAGGCAGGTGGGTTT...GGAGCCAGGGCCTCTACTGTCAATATTATTCCAAGCACTATAGTCTTCTAGGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045368.12 ENSMUST00000131520.8 |
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| 3UTR-3UTR GCA 90 bp | AATGTGGAACTCTGGAACTTTGGACCAGAAAAATGGGTGAATGCTGAGAGCACTCTGCGGCTCCAAAGCTaGAGGACCTCCATGACACAG | + |
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Preference number: 2 (lower is better) Translates to: NVELWNFGPEKWVNAESTLRLQS*RTSMTQ Trigger: CTGTGTCATGGAGGTCCTGCAGCTTTGGAGCCGCAG...AGTGCTCTCAGCATTCACCCATTTTTCTGGTCCAAAGTTCCAGAGTTCCACATT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045368.12 ENSMUST00000131520.8 |
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| 3UTR-3UTR GCA 90 bp | CCTGCGGCTCCAAAGCTGCAGGACCTCCATGACACAGAGCAACAACAGAATAACACCTCTTCATACTGTTaGTGTGTCAGCAACCCTTCT | + |
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Preference number: 2 (lower is better) Translates to: PAAPKLQDLHDTEQQQNNTSSYC*CVSNPS Trigger: AGAAGGGTTGCTGACACAGCAACAGTATGAAGAGGT...GTTATTCTGTTGTTGCTCTGTGTCATGGAGGTCCTGCAGCTTTGGAGCCGCAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131520.8 |
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| 3UTR-3UTR CCA 90 bp | AAGAGCTGCACAGAGCAGAATCACCAGAGAATGATCTGTTACAGGCAGCAGTGTCTTGTAATACCAGCCTaGGAAGGTGGGAGGCAGAGA | + |
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Preference number: 2 (lower is better) Translates to: KSCTEQNHQRMICYRQQCLVIPA*EGGRQR Trigger: TCTCTGCCTCCCACCTTCCCAGGCTGGTATTACAAG...ACACTGCTGCCTGTAACAGATCATTCTCTGGTGATTCTGCTCTGTGCAGCTCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045368.12 ENSMUST00000131520.8 |
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| 3UTR-3UTR CCA 90 bp | GAGCACTGTGGAACAGCACTTGCTGTTTTAAGCCTAGAAGACTATAGTGCTTGGAGAAGTCCCCTGGTTTaGGCAGGAGAGATGGCTCAG | + |
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Preference number: 2 (lower is better) Translates to: EHCGTALAVLSLEDYSAWRSPLV*AGEMAQ Trigger: CTGAGCCATCTCTCCTGCCCAAACCAGGGGACTTCT...CCAAGCACTATAGTCTTCTAGGCTTAAAACAGCAAGTGCTGTTCCACAGTGCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045368.12 ENSMUST00000131520.8 |
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| 3UTR-3UTR TCA 90 bp | GAGCACTGTGGAACAGCACTTGCTGTTTTAAGCCTAGAAGACTATAGTGCTTGGGCAGGTCTGAGAGCCTaGATACAGATGGGAACAAGG | + |
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Preference number: 2 (lower is better) Translates to: EHCGTALAVLSLEDYSAWAGLRA*IQMGTR Trigger: CCTTGTTCCCATCTGTATTCAGGCTCTCAGACCTGC...CCAAGCACTATAGTCTTCTAGGCTTAAAACAGCAAGTGCTGTTCCACAGTGCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045368.12 ENSMUST00000131520.8 |
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| 3UTR-3UTR TCA 90 bp | GAGGCATGCCATTGGGGGCAGGCTTTGTGTTTACAGCCAAGGTCTACTTCACTGATTGCATTGAGTCTCTaGAGAGATCTTGGAACAGCA | + |
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Preference number: 2 (lower is better) Translates to: EACHWGQALCLQPRSTSLIALSL*RDLGTA Trigger: TGCTGTTCCAAGATCTCTTCAGAGACTCAATGCAAT...CAGTGAAGTAGACCTTGGCTGTAAACACAAAGCCTGCCCCCAATGGCATGCCTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045368.12 ENSMUST00000131520.8 |
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| 3UTR-3UTR TCA 90 bp | ATTGTGTGTTGGAAGTATGTTCCTGGCTCTCTGATTCACAGGGGAGATAAGACAGTTTCTGCAAGGCCATaGGAGGCCACTGTGAAGCTG | + |
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Preference number: 2 (lower is better) Translates to: IVCWKYVPGSLIHRGDKTVSARP*EATVKL Trigger: CAGCTTCACAGTGGCCTCTCATGGCCTTGCAGAAAC...TGTCTTATCTCCCCTGTGAATCAGAGAGCCAGGAACATACTTCCAACACACAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045368.12 ENSMUST00000131520.8 |
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| 3UTR-3UTR TCA 90 bp | GGCAGGAGAGATGGCTCAGTGATTAAGGACAGTGACTGTTCTTCCAGAGGTTCTTTCCCAGCAACCACATaGTGGCTCATGACTATCTGT | + |
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Preference number: 2 (lower is better) Translates to: GRRDGSVIKDSDCSSRGSFPATT*WLMTIC Trigger: ACAGATAGTCATGAGCCATCATGTGGTTGCTGGGAA...AGAACCTCTGGAAGAACAGTCACTGTCCTTAATCACTGAGCCATCTCTCCTGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045368.12 ENSMUST00000131520.8 |
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| 3UTR-3UTR GCA 90 bp | GCTCAACACTGGGACAGTGGAAGTTGGTCAAGGAGAGAATCCTTTCAGATAAACCAGAGACAGAGTTTCTaGAAGGCCATGAGAGGCCAC | + |
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Preference number: 2 (lower is better) Translates to: AQHWDSGSWSRRESFQINQRQSF*KAMRGH Trigger: GTGGCCTCTCATGGCCTTGCAGAAACTCTGTCTCTG...GTTTATCTGAAAGGATTCTCTCCTTGACCAACTTCCACTGTCCCAGTGTTGAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045368.12 ENSMUST00000131520.8 |
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| 3UTR-3UTR GCA 90 bp | GAGGCATGCCATTGGGGGCAGGCTTTGTGTTTACAGCCAAGGTCTACTTCACTGATTTTGGGAGGAGATTaGAAGGGTGAAGGGCTATTA | + |
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Preference number: 2 (lower is better) Translates to: EACHWGQALCLQPRSTSLILGGD*KGEGLL Trigger: TAATAGCCCTTCACCCTTGCAATCTCCTCCCAAAAT...CAGTGAAGTAGACCTTGGCTGTAAACACAAAGCCTGCCCCCAATGGCATGCCTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000045368.12 ENSMUST00000131520.8 |
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| 3UTR-3UTR CCA 90 bp | AGTTTACTCCCTGGTGACAGAACTGTAAAACCACAATCTTTCTCAGGAGCTTTGAGAGGCCCTGGCTCCTaGGGCTTTAGAGGCAAACAG | + |
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Preference number: 2 (lower is better) Translates to: SLLPGDRTVKPQSFSGALRGPGS*GFRGKQ Trigger: CTGTTTGCCTCTAAAGCCCCAGGAGCCAGGGCCTCT...CAAAGCTCCTGAGAAAGATTGTGGTTTTACAGTTCTGTCACCAGGGAGTAAACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045368.12 ENSMUST00000131520.8 |
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| 3UTR-3UTR TCA 90 bp | GAGGCATGCCATTGGGGGCAGGCTTTGTGTTTACAGCCAAGGTCTACTTCACTGCAGATAAAGTCTTTGTaGAGTTGCTTTTGGTTGTGG | + |
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Preference number: 2 (lower is better) Translates to: EACHWGQALCLQPRSTSLQIKSL*SCFWLW Trigger: CCACAACCAAAAGCAACTTCACAAAGACTTTATCTG...CAGTGAAGTAGACCTTGGCTGTAAACACAAAGCCTGCCCCCAATGGCATGCCTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000045368.12 ENSMUST00000131520.8 |
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| 3UTR-3UTR TCA 90 bp | GGCAGGAGAGATGGCTCAGTGATTAAGGACAGTGACTGTTCTTCCAGAGGTTCTAAGTGTACAGCTTGGTaGAGAGAACACAGAGAAGCT | + |
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Preference number: 2 (lower is better) Translates to: GRRDGSVIKDSDCSSRGSKCTAW*REHREA Trigger: AGCTTCTCTGTGTTCTCTTCACCAAGCTGTACACTT...AGAACCTCTGGAAGAACAGTCACTGTCCTTAATCACTGAGCCATCTCTCCTGCC 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045368.12 ENSMUST00000131520.8 |
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| 3UTR-3UTR GCA 90 bp | CACTATGTCATCACCCCTTCCTTTTGGAATGGGAATGTATATTCTGTGCCATTGCTGCCCTGGCTACCTTaGCTTCCCACTGCTATAGTC | + |
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Preference number: 2 (lower is better) Translates to: HYVITPSFWNGNVYSVPLLPWLP*LPTAIV Trigger: GACTATAGCAGTGGGAAGGCAAGGTAGCCAGGGCAG...CAATGGCACAGAATATACATTCCCATTCCAAAAGGAAGGGGTGATGACATAGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045368.12 ENSMUST00000131520.8 |
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| 3UTR-3UTR GCA 90 bp | AGCACTCACACATTTAAGAAAGAAAAAGGGCTCCTCCAGGTGGTACAGATAAGGCAGAGACAGAGTTTCTaGAAGGCCATGAGAGGCCAC | + |
|
Preference number: 2 (lower is better) Translates to: STHTFKKEKGLLQVVQIRQRQSF*KAMRGH Trigger: GTGGCCTCTCATGGCCTTGCAGAAACTCTGTCTCTG...CCTTATCTGTACCACCTGGAGGAGCCCTTTTTCTTTCTTAAATGTGTGAGTGCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045368.12 ENSMUST00000131520.8 |
||
| 3UTR-3UTR CCA 90 bp | ATGGGAATGTATATTCTGTGCCATTGTGTGTTGGAAGTATGTTCCTGGCTCTCTTTACAGGCAGCAGTGTaGACGGGTCAGAGGCATCTC | + |
|
Preference number: 2 (lower is better) Translates to: MGMYILCHCVLEVCSWLSLQAAV*TGQRHL Trigger: GAGATGCCTCTGACCCGTCCACACTGCTGCCTGTAA...AGAGAGCCAGGAACATACTTCCAACACACAATGGCACAGAATATACATTCCCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045368.12 ENSMUST00000131520.8 |
||
| 3UTR CAA 90 bp | TGTTATGAACTTTTAAGATACAGAGTTGCTGGAGGAGGCATGCCATaGGGGGCAGGCTTTGTGTTTACAGCCAAGGTCTACTTCACTGTG | + |
|
Preference number: 2 (lower is better) Translates to: CYELLRYRVAGGGMP*GAGFVFTAKVYFTV Trigger: CACAGTGAAGTAGACCTTGGCTGTAAACACAAAGCCTGCCCCCAATGGCATGCCTCCTCCAGCAACTCTGTATCTTAAAAGTTCATAACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000045368.12 ENSMUST00000131520.8 |
||
| 3UTR-3UTR TCA 90 bp | TTGGGCAGGAGAGATGGCTCAGTGATTAAGGACAGTGACTGTTCTTCCAGAGGTCTGGGGTGCATGATATaGAACTCACAGAGAATCAAT | + |
|
Preference number: 2 (lower is better) Translates to: LGRRDGSVIKDSDCSSRGLGCMI*NSQRIN Trigger: ATTGATTCTCTGTGAGTTTCATATCATGCACCCCAG...ACCTCTGGAAGAACAGTCACTGTCCTTAATCACTGAGCCATCTCTCCTGCCCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045368.12 ENSMUST00000131520.8 |
||
| 3UTR-3UTR GCA 90 bp | ACAGCTAGATATGGTATATTCCTCTCCATCAGAGCAGTATATCTTACACAGAGGGGCGGCTGCGAGGAATaGTTCATACACACTGGCTGT | + |
|
Preference number: 2 (lower is better) Translates to: TARYGIFLSIRAVYLTQRGGCEE*FIHTGC Trigger: ACAGCCAGTGTGTATGAAGCATTCCTCGCAGCCGCC...CCTCTGTGTAAGATATACTGCTCTGATGGAGAGGAATATACCATATCTAGCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131520.8 |
||
| 3UTR-3UTR GCA 90 bp | AGTTTACTCCCTGGTGACAGAACTGTAAAACCACAATCTTTCTCAGGAGCTTTGGTGAACACCCACAAGTaGGCTTCCCAGCACACAAAG | + |
|
Preference number: 2 (lower is better) Translates to: SLLPGDRTVKPQSFSGALVNTHK*ASQHTK Trigger: CTTTGTGTGCTGGGAAGCGCACTTGTGGGTGTTCAC...CAAAGCTCCTGAGAAAGATTGTGGTTTTACAGTTCTGTCACCAGGGAGTAAACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045368.12 ENSMUST00000131520.8 |
||
| 3UTR-3UTR GCA 90 bp | TGGGACAGTGGAAGTTGGTCAAGGAGAGAATCCTTTCAGATAAACCTCCACTCTACCTTGCCTTCCCACTaGTATAGTCATCTAGTCCTC | + |
|
Preference number: 2 (lower is better) Translates to: WDSGSWSRRESFQINLHSTLPSH*YSHLVL Trigger: GAGGACTAGATGACTATAGCAGTGGGAAGGCAAGGT...AGAGTGGAGGTTTATCTGAAAGGATTCTCTCCTTGACCAACTTCCACTGTCCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045368.12 ENSMUST00000131520.8 |
||
| 3UTR-3UTR GCA 90 bp | TGTCAAGGTAAAATTTGGGTTGTGGCACAAATCCCAAGACACTGGAAATACAAGCTGCCCTGGCTACCTTaGCTTCCCACTGCTATAGTC | + |
|
Preference number: 2 (lower is better) Translates to: CQGKIWVVAQIPRHWKYKLPWLP*LPTAIV Trigger: GACTATAGCAGTGGGAAGGCAAGGTAGCCAGGGCAG...CTTGTATTTCCAGTGTCTTGGGATTTGTGCCACAACCCAAATTTTACCTTGACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045368.12 ENSMUST00000131520.8 |
||
| 3UTR-3UTR GCA 90 bp | GTAAGCTTTTGGTCACGTTGTTTTATCCCAGCAACAGATAGGCAACTAATACAGAAACCCACCTGCCTCTaGCTCCTGAGTGCTGGGATT | + |
|
Preference number: 2 (lower is better) Translates to: VSFWSRCFIPATDRQLIQKPTCL*LLSAGI Trigger: AATCCCAGCACTCAGGAGGCAGAGGCAGGTGGGTTT...CTGTATTAGTTGCCTATCTGTTGCTGGGATAAAACAACGTGACCAAAAGCTTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045368.12 ENSMUST00000131520.8 |
||
| 3UTR-3UTR CCA 90 bp | CCTGCGGCTCCAAAGCTGCAGGACCTCCATGACACAGAGCAACAACAGAATAACCATGCTTTTACTCTTTaGTCCAATATTCCCTCACTA | + |
|
Preference number: 2 (lower is better) Translates to: PAAPKLQDLHDTEQQQNNHAFTL*SNIPSL Trigger: TAGTGAGGGAATATTGGACCAAAGAGTAAAAGCATG...GTTATTCTGTTGTTGCTCTGTGTCATGGAGGTCCTGCAGCTTTGGAGCCGCAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045368.12 ENSMUST00000131520.8 |
||
| 3UTR-3UTR CCA 90 bp | AGCACTCACACATTTAAGAAAGAAAAAGGGCTCCTCCAGGTGGTACAGATAAGGCAACAACAGAATAACTaGGAGGAGTCCCGAGGAGGA | + |
|
Preference number: 2 (lower is better) Translates to: STHTFKKEKGLLQVVQIRQQQNN*EESRGG Trigger: TCCTCCTCGGGACTCCTCCCAGTTATTCTGTTGTTG...CCTTATCTGTACCACCTGGAGGAGCCCTTTTTCTTTCTTAAATGTGTGAGTGCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045368.12 ENSMUST00000131520.8 |
||
| 3UTR-3UTR CCA 90 bp | AACAGTTTACTCCCTGGTGACAGAACTGTAAAACCACAATCTTTCTCAGGAGCTGAGGAGGCATGCCATTaGGGGCAGGCTTTGTGTTTA | + |
|
Preference number: 2 (lower is better) Translates to: NSLLPGDRTVKPQSFSGAEEACH*GQALCL Trigger: TAAACACAAAGCCTGCCCCCAATGGCATGCCTCCTC...AGCTCCTGAGAAAGATTGTGGTTTTACAGTTCTGTCACCAGGGAGTAAACTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045368.12 ENSMUST00000131520.8 |
||
| 3UTR-3UTR TCA 90 bp | CAATATTCCCTCACTATGTCATCACCCCTTCCTTTTGGAATGGGAATGTATATTTGGGCAAGGCAGGTCTaGGAGCCTGAATACAGATGG | + |
|
Preference number: 2 (lower is better) Translates to: QYSLTMSSPLPFGMGMYIWARQV*EPEYRW Trigger: CCATCTGTATTCAGGCTCTCAGACCTGCCTTGCCCA...AATATACATTCCCATTCCAAAAGGAAGGGGTGATGACATAGTGAGGGAATATTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045368.12 ENSMUST00000131520.8 |
||
| 3UTR-3UTR TCA 90 bp | AAGTCCCCTGGTTTGGGCAGGAGAGATGGCTCAGTGATTAAGGACAGTGACTGTGGCTATGGGAACTTTTaGTATTGGACTAACTACATT | + |
|
Preference number: 2 (lower is better) Translates to: KSPGLGRRDGSVIKDSDCGYGNF*YWTNYI Trigger: AATGTAGTTAGTCCAATATCAAAAGTTCCCATAGCC...ACAGTCACTGTCCTTAATCACTGAGCCATCTCTCCTGCCCAAACCAGGGGACTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045368.12 ENSMUST00000131520.8 |
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| 3UTR-3UTR TCA 90 bp | TCTTCCTGGCTTCAGAAAGTCACTGAGGAAACATGTGGCAGAGACAGAGTTTCTAGAATCACCAGAGAATaGTCTGTTACAGGCAGCAGT | + |
|
Preference number: 2 (lower is better) Translates to: SSWLQKVTEETCGRDRVSRITRE*SVTGSS Trigger: ACTGCTGCCTGTAACAGATCATTCTCTGGTGATTCT...AGAAACTCTGTCTCTGCCACATGTTTCCTCAGTGACTTTCTGAAGCCAGGAAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045368.12 ENSMUST00000131520.8 |
||
| 3UTR-3UTR TCA 90 bp | ATGGAGCTGCAGGGTCTGGCTTTCATCATGCTTTTACTCTTTGGTCCAATATTCGCTTCAGAAAGTCACTaGGGAAACATGTGGCAGAGA | + |
|
Preference number: 2 (lower is better) Translates to: MELQGLAFIMLLLFGPIFASESH*GNMWQR Trigger: TCTCTGCCACATGTTTCCTCAGTGACTTTCTGAAGC...GAATATTGGACCAAAGAGTAAAAGCATGATGAAAGCCAGACCCTGCAGCTCCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045368.12 ENSMUST00000131520.8 |
||
| 3UTR-3UTR CCA 90 bp | TTGGGCAGGAGAGATGGCTCAGTGATTAAGGACAGTGACTGTTCTTCCAGAGGTTGCAAGAATGAAAAGTaGATTCTTCCTGGCTTCAGA | + |
|
Preference number: 2 (lower is better) Translates to: LGRRDGSVIKDSDCSSRGCKNEK*ILPGFR Trigger: TCTGAAGCCAGGAAGAATCCACTTTTCATTCTTGCA...ACCTCTGGAAGAACAGTCACTGTCCTTAATCACTGAGCCATCTCTCCTGCCCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045368.12 ENSMUST00000131520.8 |
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| 3UTR-3UTR CCA 90 bp | AACAGTTTACTCCCTGGTGACAGAACTGTAAAACCACAATCTTTCTCAGGAGCTCAACAACAGAATAACTaGGAGGAGTCCCGAGGAGGA | + |
|
Preference number: 2 (lower is better) Translates to: NSLLPGDRTVKPQSFSGAQQQNN*EESRGG Trigger: TCCTCCTCGGGACTCCTCCCAGTTATTCTGTTGTTG...AGCTCCTGAGAAAGATTGTGGTTTTACAGTTCTGTCACCAGGGAGTAAACTGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045368.12 ENSMUST00000131520.8 |
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| 3UTR-3UTR TCA 90 bp | TCTTGCTCAACACTGGGACAGTGGAAGTTGGTCAAGGAGAGAATCCTTTCAGATTTAGACTTAGGTATTTaGACACTTGGTCCCCAGTCA | + |
|
Preference number: 2 (lower is better) Translates to: SCSTLGQWKLVKERILSDLDLGI*TLGPQS Trigger: TGACTGGGGACCAAGTGTTCAAATACCTAAGTCTAA...ATCTGAAAGGATTCTCTCCTTGACCAACTTCCACTGTCCCAGTGTTGAGCAAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045368.12 ENSMUST00000131520.8 |
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| 3UTR-3UTR TCA 90 bp | TGGGACAGTGGAAGTTGGTCAAGGAGAGAATCCTTTCAGATAAACCTCCACTCTATTGCATTGAGTCTCTaGAGAGATCTTGGAACAGCA | + |
|
Preference number: 2 (lower is better) Translates to: WDSGSWSRRESFQINLHSIALSL*RDLGTA Trigger: TGCTGTTCCAAGATCTCTTCAGAGACTCAATGCAAT...AGAGTGGAGGTTTATCTGAAAGGATTCTCTCCTTGACCAACTTCCACTGTCCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045368.12 ENSMUST00000131520.8 |
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| 3UTR-3UTR CCA 90 bp | TTGGGCAGGAGAGATGGCTCAGTGATTAAGGACAGTGACTGTTCTTCCAGAGGTAGTTGCTTTTGGTTGTaGTATTTTGTCACAGCAACT | + |
|
Preference number: 2 (lower is better) Translates to: LGRRDGSVIKDSDCSSRGSCFWL*YFVTAT Trigger: AGTTGCTGTGACAAAATACCACAACCAAAAGCAACT...ACCTCTGGAAGAACAGTCACTGTCCTTAATCACTGAGCCATCTCTCCTGCCCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045368.12 ENSMUST00000131520.8 |
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| 3UTR-3UTR CCA 90 bp | GGCAGGAGAGATGGCTCAGTGATTAAGGACAGTGACTGTTCTTCCAGAGGTTCTAGGAAATCCTTTGAATaGCTTTGCCACTTTGAAGAA | + |
|
Preference number: 2 (lower is better) Translates to: GRRDGSVIKDSDCSSRGSRKSFE*LCHFEE Trigger: TTCTTCAAAGTGGCAAAGCCATTCAAAGGATTTCCT...AGAACCTCTGGAAGAACAGTCACTGTCCTTAATCACTGAGCCATCTCTCCTGCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131520.8 |
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| 3UTR-3UTR CCA 90 bp | GAGCACTGTGGAACAGCACTTGCTGTTTTAAGCCTAGAAGACTATAGTGCTTGGCAATGTAGCCTTCAGTaGACGGCTTTTCTTGAAGAA | + |
|
Preference number: 2 (lower is better) Translates to: EHCGTALAVLSLEDYSAWQCSLQ*TAFLEE Trigger: TTCTTCAAGAAAAGCCGTCCACTGAAGGCTACATTG...CCAAGCACTATAGTCTTCTAGGCTTAAAACAGCAAGTGCTGTTCCACAGTGCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131520.8 |
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| 3UTR-3UTR TCA 90 bp | GAGCACTGTGGAACAGCACTTGCTGTTTTAAGCCTAGAAGACTATAGTGCTTGGCAGATAAAGTCTTTGTaGAGTTGCTTTTGGTTGTGG | + |
|
Preference number: 2 (lower is better) Translates to: EHCGTALAVLSLEDYSAWQIKSL*SCFWLW Trigger: CCACAACCAAAAGCAACTTCACAAAGACTTTATCTG...CCAAGCACTATAGTCTTCTAGGCTTAAAACAGCAAGTGCTGTTCCACAGTGCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045368.12 ENSMUST00000131520.8 |
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| 3UTR-3UTR TCA 90 bp | CCCCTTCCTTTTGGAATGGGAATGTATATTCTGTGCCATTGTGTGTTGGAAGTACATGAGAGGCCACTGTaGAGCTGTCAAGGTAAAATT | + |
|
Preference number: 2 (lower is better) Translates to: PLPFGMGMYILCHCVLEVHERPL*SCQGKI Trigger: AATTTTACCTTGACAGCTTCACAGTGGCCTCTCATG...TACTTCCAACACACAATGGCACAGAATATACATTCCCATTCCAAAAGGAAGGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000045368.12 ENSMUST00000131520.8 |
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| 3UTR-3UTR TCA 90 bp | AAGAGCTGCACAGAGCAGAATCACCAGAGAATGATCTGTTACAGGCAGCAGTGTAAAGGCACTGTAAGCTaGCAGTCTATTTTTCAAGTT | + |
|
Preference number: 2 (lower is better) Translates to: KSCTEQNHQRMICYRQQCKGTVS*QSIFQV Trigger: AACTTGAAAAATAGACTGTCAGCTTACAGTGCCTTT...ACACTGCTGCCTGTAACAGATCATTCTCTGGTGATTCTGCTCTGTGCAGCTCTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045368.12 ENSMUST00000131520.8 |
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| 3UTR-3UTR TCA 90 bp | GAGCACTGTGGAACAGCACTTGCTGTTTTAAGCCTAGAAGACTATAGTGCTTGGAACCATTCACTGCAATaGACATTTGCAAGTGAGGAT | + |
|
Preference number: 2 (lower is better) Translates to: EHCGTALAVLSLEDYSAWNHSLQ*TFASED Trigger: ATCCTCACTTGCAAATGTTCATTGCAGTGAATGGTT...CCAAGCACTATAGTCTTCTAGGCTTAAAACAGCAAGTGCTGTTCCACAGTGCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045368.12 ENSMUST00000131520.8 |
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| 3UTR-3UTR TCA 90 bp | GTAAGCTTTTGGTCACGTTGTTTTATCCCAGCAACAGATAGGCAACTAATACAGTGGAGGCCATTTATGTaGCCCTTGACGAAGAATCTG | + |
|
Preference number: 2 (lower is better) Translates to: VSFWSRCFIPATDRQLIQWRPFM*PLTKNL Trigger: CAGATTCTTCGTCAAGGGTCACATAAATGGCCTCCA...CTGTATTAGTTGCCTATCTGTTGCTGGGATAAAACAACGTGACCAAAAGCTTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045368.12 ENSMUST00000131520.8 |
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| 3UTR-3UTR GCA 90 bp | AGCCTAGAAGACTATAGTGCTTGGAATAATATTGACAGTAGAGGCCCTGGCTCCGTCTGGCTTTCATCATaGTTTTACTCTTTGGTCCAA | + |
|
Preference number: 2 (lower is better) Translates to: SLEDYSAWNNIDSRGPGSVWLSS*FYSLVQ Trigger: TTGGACCAAAGAGTAAAAGCATGATGAAAGCCAGAC...GGAGCCAGGGCCTCTACTGTCAATATTATTCCAAGCACTATAGTCTTCTAGGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045368.12 ENSMUST00000131520.8 |
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| 3UTR-3UTR GCA 90 bp | GCTCAACACTGGGACAGTGGAAGTTGGTCAAGGAGAGAATCCTTTCAGATAAACGTCTGGCTTTCATCATaGTTTTACTCTTTGGTCCAA | + |
|
Preference number: 2 (lower is better) Translates to: AQHWDSGSWSRRESFQINVWLSS*FYSLVQ Trigger: TTGGACCAAAGAGTAAAAGCATGATGAAAGCCAGAC...GTTTATCTGAAAGGATTCTCTCCTTGACCAACTTCCACTGTCCCAGTGTTGAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045368.12 ENSMUST00000131520.8 |
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| 3UTR-3UTR CCA 90 bp | TCCTGGCTTCAGAAAGTCACTGAGGAAACATGTGGCAGAGACAGAGTTTCTGCAAGTTGCTTTTGGTTGTaGTATTTTGTCACAGCAACT | + |
|
Preference number: 2 (lower is better) Translates to: SWLQKVTEETCGRDRVSASCFWL*YFVTAT Trigger: AGTTGCTGTGACAAAATACCACAACCAAAAGCAACT...TGCAGAAACTCTGTCTCTGCCACATGTTTCCTCAGTGACTTTCTGAAGCCAGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045368.12 ENSMUST00000131520.8 |
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| 3UTR-3UTR CCA 90 bp | GCTCAACACTGGGACAGTGGAAGTTGGTCAAGGAGAGAATCCTTTCAGATAAACGTAAAATTTGGGTTGTaGCACAAATCCCAAGACACT | + |
|
Preference number: 2 (lower is better) Translates to: AQHWDSGSWSRRESFQINVKFGL*HKSQDT Trigger: AGTGTCTTGGGATTTGTGCCACAACCCAAATTTTAC...GTTTATCTGAAAGGATTCTCTCCTTGACCAACTTCCACTGTCCCAGTGTTGAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045368.12 ENSMUST00000131520.8 |
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| 3UTR-3UTR CCA 90 bp | AGCCTAGAAGACTATAGTGCTTGGAATAATATTGACAGTAGAGGCCCTGGCTCCTGTCAAGGTAAAATTTaGGTTGTGGCACAAATCCCA | + |
|
Preference number: 2 (lower is better) Translates to: SLEDYSAWNNIDSRGPGSCQGKI*VVAQIP Trigger: TGGGATTTGTGCCACAACCCAAATTTTACCTTGACA...GGAGCCAGGGCCTCTACTGTCAATATTATTCCAAGCACTATAGTCTTCTAGGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045368.12 ENSMUST00000131520.8 |
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| 3UTR-3UTR CCA 90 bp | TCTTGCTCAACACTGGGACAGTGGAAGTTGGTCAAGGAGAGAATCCTTTCAGATTGTCAAGGTAAAATTTaGGTTGTGGCACAAATCCCA | + |
|
Preference number: 2 (lower is better) Translates to: SCSTLGQWKLVKERILSDCQGKI*VVAQIP Trigger: TGGGATTTGTGCCACAACCCAAATTTTACCTTGACA...ATCTGAAAGGATTCTCTCCTTGACCAACTTCCACTGTCCCAGTGTTGAGCAAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045368.12 ENSMUST00000131520.8 |
||
| 3UTR-3UTR CCA 90 bp | AGTTGGTCAAGGAGAGAATCCTTTCAGATAAACCTCCACTCTGAAAGACAGCATGTGTGGCTTTTATTTTaGGAGGAGATTGCAAGGGTG | + |
|
Preference number: 2 (lower is better) Translates to: SWSRRESFQINLHSERQHVWLLF*EEIARV Trigger: CACCCTTGCAATCTCCTCCCAAAATAAAAGCCACAC...ATGCTGTCTTTCAGAGTGGAGGTTTATCTGAAAGGATTCTCTCCTTGACCAACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045368.12 ENSMUST00000131520.8 |
||
| 3UTR-3UTR CCA 90 bp | AACAGTTTACTCCCTGGTGACAGAACTGTAAAACCACAATCTTTCTCAGGAGCTGTTCGTGTGTGTGTGTaGCTTTTATTTTGGGAGGAG | + |
|
Preference number: 2 (lower is better) Translates to: NSLLPGDRTVKPQSFSGAVRVCV*LLFWEE Trigger: CTCCTCCCAAAATAAAAGCCACACACACACACGAAC...AGCTCCTGAGAAAGATTGTGGTTTTACAGTTCTGTCACCAGGGAGTAAACTGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000045368.12 ENSMUST00000131520.8 |
||
| 3UTR-3UTR TCA 90 bp | AATGTGGAACTCTGGAACTTTGGACCAGAAAAATGGGTGAATGCTGAGAGCACTGTAACTAATACAACTTaGAAGCATGAAGCCCAGAGT | + |
|
Preference number: 2 (lower is better) Translates to: NVELWNFGPEKWVNAESTVTNTT*KHEAQS Trigger: ACTCTGGGCTTCATGCTTTCAAGTTGTATTAGTTAC...AGTGCTCTCAGCATTCACCCATTTTTCTGGTCCAAAGTTCCAGAGTTCCACATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045368.12 ENSMUST00000131520.8 |
||
| 3UTR-3UTR TCA 90 bp | TGGGACAGTGGAAGTTGGTCAAGGAGAGAATCCTTTCAGATAAACCTCCACTCTGGCTATGGGAACTTTTaGTATTGGACTAACTACATT | + |
|
Preference number: 2 (lower is better) Translates to: WDSGSWSRRESFQINLHSGYGNF*YWTNYI Trigger: AATGTAGTTAGTCCAATATCAAAAGTTCCCATAGCC...AGAGTGGAGGTTTATCTGAAAGGATTCTCTCCTTGACCAACTTCCACTGTCCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045368.12 ENSMUST00000131520.8 |
||
| 3UTR-3UTR TCA 90 bp | GTAAGCTTTTGGTCACGTTGTTTTATCCCAGCAACAGATAGGCAACTAATACAGCTGGGAGGCATGTACTaGGAAAGGCTGCTATTATTA | + |
|
Preference number: 2 (lower is better) Translates to: VSFWSRCFIPATDRQLIQLGGMY*ERLLLL Trigger: TAATAATAGCAGCCTTTCTCAGTACATGCCTCCCAG...CTGTATTAGTTGCCTATCTGTTGCTGGGATAAAACAACGTGACCAAAAGCTTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045368.12 ENSMUST00000131520.8 |
||
| 3UTR-3UTR TCA 90 bp | GTAAGCTTTTGGTCACGTTGTTTTATCCCAGCAACAGATAGGCAACTAATACAGAGAGAAGCTCAATATTaGCTTAATGACCTGGGAGGC | + |
|
Preference number: 2 (lower is better) Translates to: VSFWSRCFIPATDRQLIQREAQY*LNDLGG Trigger: GCCTCCCAGGTCATTAAGTCAATATTGAGCTTCTCT...CTGTATTAGTTGCCTATCTGTTGCTGGGATAAAACAACGTGACCAAAAGCTTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045368.12 ENSMUST00000131520.8 |
||
| 3UTR-3UTR TCA 90 bp | AGTTTACTCCCTGGTGACAGAACTGTAAAACCACAATCTTTCTCAGGAGCTTTGGAAGCTACCAACAAGTaGGAGTGTTGCTGTGAAAAA | + |
|
Preference number: 2 (lower is better) Translates to: SLLPGDRTVKPQSFSGALEATNK*ECCCEK Trigger: TTTTTCACAGCAACACTCTCACTTGTTGGTAGCTTC...CAAAGCTCCTGAGAAAGATTGTGGTTTTACAGTTCTGTCACCAGGGAGTAAACT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045368.12 ENSMUST00000131520.8 |
||
| 3UTR-3UTR GCA 90 bp | AATGTGGAACTCTGGAACTTTGGACCAGAAAAATGGGTGAATGCTGAGAGCACTAGACCAACCATTCACTaGAATGAACATTTGCAAGTG | + |
|
Preference number: 2 (lower is better) Translates to: NVELWNFGPEKWVNAESTRPTIH*NEHLQV Trigger: CACTTGCAAATGTTCATTGCAGTGAATGGTTGGTCT...AGTGCTCTCAGCATTCACCCATTTTTCTGGTCCAAAGTTCCAGAGTTCCACATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045368.12 ENSMUST00000131520.8 |
||
| 3UTR-3UTR GCA 90 bp | AACAGTTTACTCCCTGGTGACAGAACTGTAAAACCACAATCTTTCTCAGGAGCTCTGTGGAACAGCACTTaGTGTTTTAAGCCTAGAAGA | + |
|
Preference number: 2 (lower is better) Translates to: NSLLPGDRTVKPQSFSGALWNST*CFKPRR Trigger: TCTTCTAGGCTTAAAACAGCAAGTGCTGTTCCACAG...AGCTCCTGAGAAAGATTGTGGTTTTACAGTTCTGTCACCAGGGAGTAAACTGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045368.12 ENSMUST00000131520.8 |
||
| 3UTR-3UTR GCA 90 bp | AACAGTTTACTCCCTGGTGACAGAACTGTAAAACCACAATCTTTCTCAGGAGCTTTTAAGATACAGAGTTaGTGGAGGAGGCATGCCATT | + |
|
Preference number: 2 (lower is better) Translates to: NSLLPGDRTVKPQSFSGAFKIQS*WRRHAI Trigger: AATGGCATGCCTCCTCCAGCAACTCTGTATCTTAAA...AGCTCCTGAGAAAGATTGTGGTTTTACAGTTCTGTCACCAGGGAGTAAACTGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045368.12 ENSMUST00000131520.8 |
||
| 3UTR-3UTR CCA 90 bp | CACTATGTCATCACCCCTTCCTTTTGGAATGGGAATGTATATTCTGTGCCATTGAGTCATCTAGTCCTCTaGACTACAAGCCCAGATAAA | + |
|
Preference number: 2 (lower is better) Translates to: HYVITPSFWNGNVYSVPLSHLVL*TTSPDK Trigger: TTTATCTGGGCTTGTAGTCCAGAGGACTAGATGACT...CAATGGCACAGAATATACATTCCCATTCCAAAAGGAAGGGGTGATGACATAGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045368.12 ENSMUST00000131520.8 |
||
| 3UTR-3UTR CCA 90 bp | CCCCTTCCTTTTGGAATGGGAATGTATATTCTGTGCCATTGTGTGTTGGAAGTAAAAGTGGATTCTTCCTaGCTTCAGAAAGTCACTGAG | + |
|
Preference number: 2 (lower is better) Translates to: PLPFGMGMYILCHCVLEVKVDSS*LQKVTE Trigger: CTCAGTGACTTTCTGAAGCCAGGAAGAATCCACTTT...TACTTCCAACACACAATGGCACAGAATATACATTCCCATTCCAAAAGGAAGGGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000045368.12 ENSMUST00000131520.8 |
||
| 3UTR-3UTR CCA 90 bp | ATGGAGCTGCAGGGTCTGGCTTTCATCATGCTTTTACTCTTTGGTCCAATATTCTGCAAGAATGAAAAGTaGATTCTTCCTGGCTTCAGA | + |
|
Preference number: 2 (lower is better) Translates to: MELQGLAFIMLLLFGPIFCKNEK*ILPGFR Trigger: TCTGAAGCCAGGAAGAATCCACTTTTCATTCTTGCA...GAATATTGGACCAAAGAGTAAAAGCATGATGAAAGCCAGACCCTGCAGCTCCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045368.12 ENSMUST00000131520.8 |
||
| 3UTR CAA 90 bp | ACTCTTTGGTCCAATATTCCCTCACTATGTCATCACCCCTTCCTTTaGGAATGGGAATGTATATTCTGTGCCATTGTGTGTTGGAAGTAT | + |
|
Preference number: 2 (lower is better) Translates to: TLWSNIPSLCHHPFL*EWECIFCAIVCWKY Trigger: ATACTTCCAACACACAATGGCACAGAATATACATTCCCATTCCAAAAGGAAGGGGTGATGACATAGTGAGGGAATATTGGACCAAAGAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045368.12 ENSMUST00000131520.8 |
||
| 3UTR-3UTR TCA 90 bp | ACACAGCTAGATATGGTATATTCCTCTCCATCAGAGCAGTATATCTTACACAGACTGGCATTTACCACGTaGTTACCTCCTTTGGTTCAT | + |
|
Preference number: 2 (lower is better) Translates to: TQLDMVYSSPSEQYILHRLAFTT*LPPLVH Trigger: ATGAACCAAAGGAGGTAATCACGTGGTAAATGCCAG...TCTGTGTAAGATATACTGCTCTGATGGAGAGGAATATACCATATCTAGCTGTGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131520.8 |
||
| 3UTR-3UTR GCA 90 bp | TGTCAAGGTAAAATTTGGGTTGTGGCACAAATCCCAAGACACTGGAAATACAAGGGGGAGATAAGACATTaGATTGAGTCTCTGAAGAGA | + |
|
Preference number: 2 (lower is better) Translates to: CQGKIWVVAQIPRHWKYKGEIRH*IESLKR Trigger: TCTCTTCAGAGACTCAATGCAATGTCTTATCTCCCC...CTTGTATTTCCAGTGTCTTGGGATTTGTGCCACAACCCAAATTTTACCTTGACA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000045368.12 ENSMUST00000131520.8 |
||
| 3UTR-3UTR GCA 90 bp | GTAAGCTTTTGGTCACGTTGTTTTATCCCAGCAACAGATAGGCAACTAATACAGGGGGAGATAAGACATTaGATTGAGTCTCTGAAGAGA | + |
|
Preference number: 2 (lower is better) Translates to: VSFWSRCFIPATDRQLIQGEIRH*IESLKR Trigger: TCTCTTCAGAGACTCAATGCAATGTCTTATCTCCCC...CTGTATTAGTTGCCTATCTGTTGCTGGGATAAAACAACGTGACCAAAAGCTTAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000045368.12 ENSMUST00000131520.8 |
||
| 3UTR-3UTR CCA 90 bp | ATTGTGTGTTGGAAGTATGTTCCTGGCTCTCTGATTCACAGGGGAGATAAGACAATCACCCCTTCCTTTTaGAATGGGAATGTATATTCT | + |
|
Preference number: 2 (lower is better) Translates to: IVCWKYVPGSLIHRGDKTITPSF*NGNVYS Trigger: AGAATATACATTCCCATTCCAAAAGGAAGGGGTGAT...TGTCTTATCTCCCCTGTGAATCAGAGAGCCAGGAACATACTTCCAACACACAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000045368.12 ENSMUST00000131520.8 |
||
| 3UTR-3UTR CCA 90 bp | CCCCTTCCTTTTGGAATGGGAATGTATATTCTGTGCCATTGTGTGTTGGAAGTAGTAAAATTTGGGTTGTaGCACAAATCCCAAGACACT | + |
|
Preference number: 2 (lower is better) Translates to: PLPFGMGMYILCHCVLEVVKFGL*HKSQDT Trigger: AGTGTCTTGGGATTTGTGCCACAACCCAAATTTTAC...TACTTCCAACACACAATGGCACAGAATATACATTCCCATTCCAAAAGGAAGGGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000045368.12 ENSMUST00000131520.8 |
||
| 3UTR-3UTR CCA 90 bp | TGTCAAGGTAAAATTTGGGTTGTGGCACAAATCCCAAGACACTGGAAATACAAGTCTCTGAAGAGATCTTaGAACAGCACTGAGACTATT | + |
|
Preference number: 2 (lower is better) Translates to: CQGKIWVVAQIPRHWKYKSLKRS*NSTETI Trigger: AATAGTCTCAGTGCTGTTCCAAGATCTCTTCAGAGA...CTTGTATTTCCAGTGTCTTGGGATTTGTGCCACAACCCAAATTTTACCTTGACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045368.12 ENSMUST00000131520.8 |
||
| 3UTR-3UTR CCA 90 bp | CCCCTTCCTTTTGGAATGGGAATGTATATTCTGTGCCATTGTGTGTTGGAAGTACATGCTTTTACTCTTTaGTCCAATATTCCCTCACTA | + |
|
Preference number: 2 (lower is better) Translates to: PLPFGMGMYILCHCVLEVHAFTL*SNIPSL Trigger: TAGTGAGGGAATATTGGACCAAAGAGTAAAAGCATG...TACTTCCAACACACAATGGCACAGAATATACATTCCCATTCCAAAAGGAAGGGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000045368.12 ENSMUST00000131520.8 |
||
| 3UTR-3UTR GCA 90 bp | ATGGGAATGTATATTCTGTGCCATTGTGTGTTGGAAGTATGTTCCTGGCTCTCTTGCAGGCATAAAAGATaGAAGAATGAAAAGTGGATT | + |
|
Preference number: 2 (lower is better) Translates to: MGMYILCHCVLEVCSWLSCRHKR*KNEKWI Trigger: AATCCACTTTTCATTCTTGCATCTTTTATGCCTGCA...AGAGAGCCAGGAACATACTTCCAACACACAATGGCACAGAATATACATTCCCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045368.12 ENSMUST00000131520.8 |
||
| 3UTR CAA 90 bp | CACTCTGATATTCTACTTTCCACGAGATATTATCTAAGCTTTGTTTaGTTCGTGTGTGTGTGTGGCTTTTATTTTGGGAGGAGATTGCAA | + |
|
Preference number: 2 (lower is better) Translates to: HSDILLSTRYYLSFV*FVCVCGFYFGRRLQ Trigger: TTGCAATCTCCTCCCAAAATAAAAGCCACACACACACACGAACAAAACAAAGCTTAGATAATATCTCGTGGAAAGTAGAATATCAGAGTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045368.12 ENSMUST00000131520.8 |
||
| 3UTR GCA 72 bp | CAAGGCTGGCCTCGAACTCAGAAACCCACCTGCCTCTaGCTCCTGAGTGCTGGGATTAAAGGTGTGCGCCAT | + |
|
Preference number: 3 (lower is better) Translates to: QGWPRTQKPTCL*LLSAGIKGVRH Trigger: ATGGCGCACACCTTTAATCCCAGCACTCAGGAGGCAGAGGCAGGTGGGTTTCTGAGTTCGAGGCCAGCCTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045368.12 ENSMUST00000131520.8 |
||
| 3UTR TCA 72 bp | CCAAGGTCTACTTCACTGTGTGCTCCCAGGGTGTGCTaGTGTGTGGTCTTGCAGCTTCTTGTGCCTGCTGCC | + |
|
Preference number: 3 (lower is better) Translates to: PRSTSLCAPRVC*CVVLQLLVPAA Trigger: GGCAGCAGGCACAAGAAGCTGCAAGACCACACATCAGCACACCCTGGGAGCACACAGTGAAGTAGACCTTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045368.12 ENSMUST00000131520.8 |
||
| 3UTR-3UTR CAA 90 bp | GTCAGTGTAGGGCTTGCCTTCTGCTGTAGACTGGAGGAAAAGTGCCTTGGTCTCCCTGCCCTGGCTACCTaGCCTTCCCACTGCTATAGT | + |
|
Preference number: 3 (lower is better) Translates to: VSVGLAFCCRLEEKCLGLPALAT*PSHCYS Trigger: ACTATAGCAGTGGGAAGGCAAGGTAGCCAGGGCAGG...GAGACCAAGGCACTTTTCCTCCAGTCTACAGCAGAAGGCAAGCCCTACACTGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045368.12 ENSMUST00000131520.8 |
||
| 3UTR-3UTR CAA 90 bp | GTCAGTGTAGGGCTTGCCTTCTGCTGTAGACTGGAGGAAAAGTGCCTTGGTCTCGGAGGAGGCATGCCATaGGGGGCAGGCTTTGTGTTT | + |
|
Preference number: 3 (lower is better) Translates to: VSVGLAFCCRLEEKCLGLGGGMP*GAGFVF Trigger: AAACACAAAGCCTGCCCCCAATGGCATGCCTCCTCC...GAGACCAAGGCACTTTTCCTCCAGTCTACAGCAGAAGGCAAGCCCTACACTGAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000045368.12 ENSMUST00000131520.8 |
||
| 3UTR TCA 72 bp | GGAATGCTTCATACACACTGGCTGTCTTCAGGGCACTaGTGGGTTAGGCCGGGTAGGCTGAGAATCCAGTGC | + |
|
Preference number: 3 (lower is better) Translates to: GMLHTHWLSSGH*WVRPGRLRIQC Trigger: GCACTGGATTCTCAGCCTACCCGGCCTAACCCATCAGTGCCCTGAAGACAGCCAGTGTGTATGAAGCATTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045368.12 ENSMUST00000131520.8 |
||
| 3UTR-3UTR CAA 90 bp | GAGGCATGCCATTGGGGGCAGGCTTTGTGTTTACAGCCAAGGTCTACTTCACTGAAGAAGTCCCCTGGTTaGGGCAGGAGAGATGGCTCA | + |
|
Preference number: 3 (lower is better) Translates to: EACHWGQALCLQPRSTSLKKSPG*GRRDGS Trigger: TGAGCCATCTCTCCTGCCCAAACCAGGGGACTTCTT...CAGTGAAGTAGACCTTGGCTGTAAACACAAAGCCTGCCCCCAATGGCATGCCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000045368.12 ENSMUST00000131520.8 |
||
| 3UTR GCA 72 bp | TTTAGGCTTCTCTCTCGGCTAGGCGGCTGCGAGGAATaGTTCATACACACTGGCTGTCTTCAGGGCACTGAT | + |
|
Preference number: 3 (lower is better) Translates to: FRLLSRLGGCEE*FIHTGCLQGTD Trigger: ATCAGTGCCCTGAAGACAGCCAGTGTGTATGAAGCATTCCTCGCAGCCGCCTAGCCGAGAGAGAAGCCTAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045368.12 ENSMUST00000131520.8 |
||
| 3UTR CCA 72 bp | TGGGAAGGTGGGAGGCAGAGAACACAGGTACCTCCCTaGAAGTACATGAGCTATCTGGCAAAGTTCCAAGCC | + |
|
Preference number: 3 (lower is better) Translates to: WEGGRQRTQVPP*KYMSYLAKFQA Trigger: GGCTTGGAACTTTGCCAGATAGCTCATGTACTTCCAGGGAGGTACCTGTGTTCTCTGCCTCCCACCTTCCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045368.12 ENSMUST00000131520.8 |
||
| 3UTR-3UTR CAA 90 bp | CAAGCTCTGTTAGAAACTGTGCCCCTCCGACACGGTCAGCAACAGCCTACAAGCTACGACCCCTGTCTTTaGCTGAGCATGGTGCTTTTG | + |
|
Preference number: 3 (lower is better) Translates to: QALLETVPLRHGQQQPTSYDPCL*LSMVLL Trigger: CAAAAGCACCATGCTCAGCAAAAGACAGGGGTCGTA...GCTTGTAGGCTGTTGCTGACCGTGTCGGAGGGGCACAGTTTCTAACAGAGCTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000147763.2 |
||
| 3UTR TCA 72 bp | CAAGGAAGAGCTGCACAGAGCAGAATCACCAGAGAATaGTCTGTTACAGGCAGCAGTGTGGACGGGTCAGAG | + |
|
Preference number: 3 (lower is better) Translates to: QGRAAQSRITRE*SVTGSSVDGSE Trigger: CTCTGACCCGTCCACACTGCTGCCTGTAACAGATCATTCTCTGGTGATTCTGCTCTGTGCAGCTCTTCCTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045368.12 ENSMUST00000131520.8 |
||
| 3UTR GCA 72 bp | CAATCTGTGAAGGGACCAGTCCTGCGGCTCCAAAGCTaGAGGACCTCCATGACACAGAGCAACAACAGAATA | + |
|
Preference number: 3 (lower is better) Translates to: QSVKGPVLRLQS*RTSMTQSNNRI Trigger: TATTCTGTTGTTGCTCTGTGTCATGGAGGTCCTGCAGCTTTGGAGCCGCAGGACTGGTCCCTTCACAGATTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045368.12 ENSMUST00000131520.8 |
||
| 3UTR CCA 72 bp | ATGGTGGTGTGTACTTGTAATACCAGCCTGGGAAGGTaGGAGGCAGAGAACACAGGTACCTCCCTGGAAGTA | + |
|
Preference number: 3 (lower is better) Translates to: MVVCTCNTSLGR*EAENTGTSLEV Trigger: TACTTCCAGGGAGGTACCTGTGTTCTCTGCCTCCCACCTTCCCAGGCTGGTATTACAAGTACACACCACCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045368.12 ENSMUST00000131520.8 |
||
| 3UTR-3UTR CAA 90 bp | GGACCAGTCCTGCGGCTCCAAAGCTGCAGGACCTCCATGACACAGAGCAACAACTTTGGTTGTGGTATTTaGTCACAGCAACTGAACAGT | + |
|
Preference number: 3 (lower is better) Translates to: GPVLRLQSCRTSMTQSNNFGCGI*SQQLNS Trigger: ACTGTTCAGTTGCTGTGACAAAATACCACAACCAAA...GTTGTTGCTCTGTGTCATGGAGGTCCTGCAGCTTTGGAGCCGCAGGACTGGTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045368.12 ENSMUST00000131520.8 |
||
| 3UTR-3UTR CAA 90 bp | AGCCTAGAAGACTATAGTGCTTGGAATAATATTGACAGTAGAGGCCCTGGCTCCCCTGCCCTGGCTACCTaGCCTTCCCACTGCTATAGT | + |
|
Preference number: 3 (lower is better) Translates to: SLEDYSAWNNIDSRGPGSPALAT*PSHCYS Trigger: ACTATAGCAGTGGGAAGGCAAGGTAGCCAGGGCAGG...GGAGCCAGGGCCTCTACTGTCAATATTATTCCAAGCACTATAGTCTTCTAGGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045368.12 ENSMUST00000131520.8 |
||
| 3UTR TCA 72 bp | GGTGTGCGCCATCACGCCTGGCTGAGGATACAATATTaGTGGTGTCACAAAGTCAGAGATCTCGAACCAGAC | + |
|
Preference number: 3 (lower is better) Translates to: GVRHHAWLRIQY*WCHKVRDLEPD Trigger: GTCTGGTTCGAGATCTCTGACTTTGTGACACCATCAATATTGTATCCTCAGCCAGGCGTGATGGCGCACACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045368.12 ENSMUST00000131520.8 |
||
| 3UTR TCA 72 bp | AGAAGTCCCCTGGTTTGGGCAGGAGAGATGGCTCAGTaGTTAAGGACAGTGACTGTTCTTCCAGAGGTTCTG | + |
|
Preference number: 3 (lower is better) Translates to: RSPLVWAGEMAQ*LRTVTVLPEVL Trigger: CAGAACCTCTGGAAGAACAGTCACTGTCCTTAATCACTGAGCCATCTCTCCTGCCCAAACCAGGGGACTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045368.12 ENSMUST00000131520.8 |
||
| 3UTR-3UTR CAA 90 bp | TCTTGCTCAACACTGGGACAGTGGAAGTTGGTCAAGGAGAGAATCCTTTCAGATTCACCAAGAGCAGTCTaGGTGTGTGGTAGGGATGGG | + |
|
Preference number: 3 (lower is better) Translates to: SCSTLGQWKLVKERILSDSPRAV*VCGRDG Trigger: CCCATCCCTACCACACACCAAGACTGCTCTTGGTGA...ATCTGAAAGGATTCTCTCCTTGACCAACTTCCACTGTCCCAGTGTTGAGCAAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045368.12 ENSMUST00000131520.8 |
||
| 3UTR-3UTR CAA 90 bp | GTCAGTGTAGGGCTTGCCTTCTGCTGTAGACTGGAGGAAAAGTGCCTTGGTCTCGTGAAAACAAGCACGTaGGGGGTAAATACCAAGTGT | + |
|
Preference number: 3 (lower is better) Translates to: VSVGLAFCCRLEEKCLGLVKTST*GVNTKC Trigger: ACACTTGGTATTTACCCCCAACGTGCTTGTTTTCAC...GAGACCAAGGCACTTTTCCTCCAGTCTACAGCAGAAGGCAAGCCCTACACTGAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000045368.12 ENSMUST00000131520.8 |
||
| 3UTR TCA 72 bp | GGAGGCAGAGAACACAGGTACCTCCCTGGAAGTACATaGGCTATCTGGCAAAGTTCCAAGCCAATGAGAAAC | + |
|
Preference number: 3 (lower is better) Translates to: GGREHRYLPGST*AIWQSSKPMRN Trigger: GTTTCTCATTGGCTTGGAACTTTGCCAGATAGCTCATGTACTTCCAGGGAGGTACCTGTGTTCTCTGCCTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045368.12 ENSMUST00000131520.8 |
||
| 3UTR TCA 72 bp | GTGTGTGGCTTTTATTTTGGGAGGAGATTGCAAGGGTaGAGGGCTATTATGAGGGACAGGGAGATGAGTGGG | + |
|
Preference number: 3 (lower is better) Translates to: VCGFYFGRRLQG*RAIMRDREMSG Trigger: CCCACTCATCTCCCTGTCCCTCATAATAGCCCTTCACCCTTGCAATCTCCTCCCAAAATAAAAGCCACACAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045368.12 ENSMUST00000131520.8 |
||
| 3UTR CCA 72 bp | AACCTCATTCTCCTTCCAGTTCACCAAGAGCAGTCTTaGTGTGTGGTAGGGATGGGATCTCTTAGCTTCCTG | + |
|
Preference number: 3 (lower is better) Translates to: NLILLPVHQEQS*CVVGMGSLSFL Trigger: CAGGAAGCTAAGAGATCCCATCCCTACCACACACCAAGACTGCTCTTGGTGAACTGGAAGGAGAATGAGGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045368.12 ENSMUST00000131520.8 |
||
| 3UTR-3UTR CAA 90 bp | AAGAGCTGCACAGAGCAGAATCACCAGAGAATGATCTGTTACAGGCAGCAGTGTCATGAAGCCCAGAGTTaGGGTTTCCAGGCCCATATA | + |
|
Preference number: 3 (lower is better) Translates to: KSCTEQNHQRMICYRQQCHEAQS*GFQAHI Trigger: TATATGGGCCTGGAAACCCAAACTCTGGGCTTCATG...ACACTGCTGCCTGTAACAGATCATTCTCTGGTGATTCTGCTCTGTGCAGCTCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045368.12 ENSMUST00000131520.8 |
||
| 3UTR-3UTR CAA 90 bp | AATGTGGAACTCTGGAACTTTGGACCAGAAAAATGGGTGAATGCTGAGAGCACTTCACCAAGAGCAGTCTaGGTGTGTGGTAGGGATGGG | + |
|
Preference number: 3 (lower is better) Translates to: NVELWNFGPEKWVNAESTSPRAV*VCGRDG Trigger: CCCATCCCTACCACACACCAAGACTGCTCTTGGTGA...AGTGCTCTCAGCATTCACCCATTTTTCTGGTCCAAAGTTCCAGAGTTCCACATT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045368.12 ENSMUST00000131520.8 |
||
| 3UTR-3UTR CAA 90 bp | TTGGGCAGGAGAGATGGCTCAGTGATTAAGGACAGTGACTGTTCTTCCAGAGGTAGTCTTGATGGGGAATaGTATCACCAGGGCCTGTTT | + |
|
Preference number: 3 (lower is better) Translates to: LGRRDGSVIKDSDCSSRGSLDGE*YHQGLF Trigger: AAACAGGCCCTGGTGATACAATTCCCCATCAAGACT...ACCTCTGGAAGAACAGTCACTGTCCTTAATCACTGAGCCATCTCTCCTGCCCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045368.12 ENSMUST00000131520.8 |
||
| 3UTR-3UTR CAA 90 bp | CCTGCGGCTCCAAAGCTGCAGGACCTCCATGACACAGAGCAACAACAGAATAACTTAGGACAGAAAGTCTaGATGGGGAATTGTATCACC | + |
|
Preference number: 3 (lower is better) Translates to: PAAPKLQDLHDTEQQQNNLGQKV*MGNCIT Trigger: GGTGATACAATTCCCCATCAAGACTTTCTGTCCTAA...GTTATTCTGTTGTTGCTCTGTGTCATGGAGGTCCTGCAGCTTTGGAGCCGCAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045368.12 ENSMUST00000131520.8 |
||
| 3UTR TCA 72 bp | GAGACAGAGTTTCTGCAAGGCCATGAGAGGCCACTGTaGAGCTGTCAAGGTAAAATTTGGGTTGTGGCACAA | + |
|
Preference number: 3 (lower is better) Translates to: ETEFLQGHERPL*SCQGKIWVVAQ Trigger: TTGTGCCACAACCCAAATTTTACCTTGACAGCTTCACAGTGGCCTCTCATGGCCTTGCAGAAACTCTGTCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045368.12 ENSMUST00000131520.8 |
||
| 3UTR-3UTR CAA 90 bp | GGCAGGAGAGATGGCTCAGTGATTAAGGACAGTGACTGTTCTTCCAGAGGTTCTTGTGTGGCTTTTATTTaGGGAGGAGATTGCAAGGGT | + |
|
Preference number: 3 (lower is better) Translates to: GRRDGSVIKDSDCSSRGSCVAFI*GGDCKG Trigger: ACCCTTGCAATCTCCTCCCAAAATAAAAGCCACACA...AGAACCTCTGGAAGAACAGTCACTGTCCTTAATCACTGAGCCATCTCTCCTGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045368.12 ENSMUST00000131520.8 |
||
| 3UTR-3UTR CAA 90 bp | GGCAGGAGAGATGGCTCAGTGATTAAGGACAGTGACTGTTCTTCCAGAGGTTCTAAGGTAAAATTTGGGTaGTGGCACAAATCCCAAGAC | + |
|
Preference number: 3 (lower is better) Translates to: GRRDGSVIKDSDCSSRGSKVKFG*WHKSQD Trigger: GTCTTGGGATTTGTGCCACAACCCAAATTTTACCTT...AGAACCTCTGGAAGAACAGTCACTGTCCTTAATCACTGAGCCATCTCTCCTGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045368.12 ENSMUST00000131520.8 |
||
| 3UTR-3UTR CAA 90 bp | AGCACTCACACATTTAAGAAAGAAAAAGGGCTCCTCCAGGTGGTACAGATAAGGCTGGGACAGTGGAAGTaGGTCAAGGAGAGAATCCTT | + |
|
Preference number: 3 (lower is better) Translates to: STHTFKKEKGLLQVVQIRLGQWK*VKERIL Trigger: AAGGATTCTCTCCTTGACCAACTTCCACTGTCCCAG...CCTTATCTGTACCACCTGGAGGAGCCCTTTTTCTTTCTTAAATGTGTGAGTGCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045368.12 ENSMUST00000131520.8 |
||
| 3UTR TCA 72 bp | CCAGACCAACCATTCACTGCAATGAACATTTGCAAGTaGGGATGCACAGACAGACGTATAGACTGTGGGACA | + |
|
Preference number: 3 (lower is better) Translates to: PDQPFTAMNICK*GCTDRRIDCGT Trigger: TGTCCCACAGTCTATACGTCTGTCTGTGCATCCTCACTTGCAAATGTTCATTGCAGTGAATGGTTGGTCTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045368.12 ENSMUST00000131520.8 |
||
| 3UTR TCA 72 bp | ATGTGGAACTCTGGAACTTTGGACCAGAAAAATGGGTaGATGCTGAGAGCACTGTGGAACAGCACTTGCTGT | + |
|
Preference number: 3 (lower is better) Translates to: MWNSGTLDQKNG*MLRALWNSTCC Trigger: ACAGCAAGTGCTGTTCCACAGTGCTCTCAGCATTCACCCATTTTTCTGGTCCAAAGTTCCAGAGTTCCACAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045368.12 ENSMUST00000131520.8 |
||
| 3UTR CCA 72 bp | GCTGCAGGGTCTGGCTTTCATCATGCTTTTACTCTTTaGTCCAATATTCCCTCACTATGTCATCACCCCTTC | + |
|
Preference number: 3 (lower is better) Translates to: AAGSGFHHAFTL*SNIPSLCHHPF Trigger: GAAGGGGTGATGACATAGTGAGGGAATATTGGACCAAAGAGTAAAAGCATGATGAAAGCCAGACCCTGCAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045368.12 ENSMUST00000131520.8 |
||
| 3UTR CCA 72 bp | CAGGACCTCCATGACACAGAGCAACAACAGAATAACTaGGAGGAGTCCCGAGGAGGATGCAATATATCTTTT | + |
|
Preference number: 3 (lower is better) Translates to: QDLHDTEQQQNN*EESRGGCNISF Trigger: AAAAGATATATTGCATCCTCCTCGGGACTCCTCCCAGTTATTCTGTTGTTGCTCTGTGTCATGGAGGTCCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045368.12 ENSMUST00000131520.8 |
||
| 3UTR-3UTR CAA 90 bp | ATGGAGCTGCAGGGTCTGGCTTTCATCATGCTTTTACTCTTTGGTCCAATATTCAGTCTTGATGGGGAATaGTATCACCAGGGCCTGTTT | + |
|
Preference number: 3 (lower is better) Translates to: MELQGLAFIMLLLFGPIFSLDGE*YHQGLF Trigger: AAACAGGCCCTGGTGATACAATTCCCCATCAAGACT...GAATATTGGACCAAAGAGTAAAAGCATGATGAAAGCCAGACCCTGCAGCTCCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045368.12 ENSMUST00000131520.8 |
||
| 3UTR TCA 72 bp | TCAGAGATCTCGAACCAGACCAACCATTCACTGCAATaGACATTTGCAAGTGAGGATGCACAGACAGACGTA | + |
|
Preference number: 3 (lower is better) Translates to: SEISNQTNHSLQ*TFASEDAQTDV Trigger: TACGTCTGTCTGTGCATCCTCACTTGCAAATGTTCATTGCAGTGAATGGTTGGTCTGGTTCGAGATCTCTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045368.12 ENSMUST00000131520.8 |
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| 3UTR TCA 72 bp | ACTCTGGAACTTTGGACCAGAAAAATGGGTGAATGCTaGGAGCACTGTGGAACAGCACTTGCTGTTTTAAGC | + |
|
Preference number: 3 (lower is better) Translates to: TLELWTRKMGEC*EHCGTALAVLS Trigger: GCTTAAAACAGCAAGTGCTGTTCCACAGTGCTCTCAGCATTCACCCATTTTTCTGGTCCAAAGTTCCAGAGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000045368.12 ENSMUST00000131520.8 |
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| 3UTR GCA 72 bp | CAAAGTCAGAGATCTCGAACCAGACCAACCATTCACTaGAATGAACATTTGCAAGTGAGGATGCACAGACAG | + |
|
Preference number: 3 (lower is better) Translates to: QSQRSRTRPTIH*NEHLQVRMHRQ Trigger: CTGTCTGTGCATCCTCACTTGCAAATGTTCATTGCAGTGAATGGTTGGTCTGGTTCGAGATCTCTGACTTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045368.12 ENSMUST00000131520.8 |
||
| 3UTR CCA 72 bp | GCACTTGCTGTTTTAAGCCTAGAAGACTATAGTGCTTaGAATAATATTGACAGTAGAGGCCCTGGCTCCTGG | + |
|
Preference number: 3 (lower is better) Translates to: ALAVLSLEDYSA*NNIDSRGPGSW Trigger: CCAGGAGCCAGGGCCTCTACTGTCAATATTATTCCAAGCACTATAGTCTTCTAGGCTTAAAACAGCAAGTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045368.12 ENSMUST00000131520.8 |
||
| 3UTR-3UTR CAA 90 bp | GTAAGCTTTTGGTCACGTTGTTTTATCCCAGCAACAGATAGGCAACTAATACAGCATGAAGCCCAGAGTTaGGGTTTCCAGGCCCATATA | + |
|
Preference number: 3 (lower is better) Translates to: VSFWSRCFIPATDRQLIQHEAQS*GFQAHI Trigger: TATATGGGCCTGGAAACCCAAACTCTGGGCTTCATG...CTGTATTAGTTGCCTATCTGTTGCTGGGATAAAACAACGTGACCAAAAGCTTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045368.12 ENSMUST00000131520.8 |
||
| 3UTR-3UTR CAA 90 bp | TCCTGGCTTCAGAAAGTCACTGAGGAAACATGTGGCAGAGACAGAGTTTCTGCATTTGGTTGTGGTATTTaGTCACAGCAACTGAACAGT | + |
|
Preference number: 3 (lower is better) Translates to: SWLQKVTEETCGRDRVSAFGCGI*SQQLNS Trigger: ACTGTTCAGTTGCTGTGACAAAATACCACAACCAAA...TGCAGAAACTCTGTCTCTGCCACATGTTTCCTCAGTGACTTTCTGAAGCCAGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045368.12 ENSMUST00000131520.8 |
||
| 3UTR-3UTR CAA 90 bp | AAGAGCTGCACAGAGCAGAATCACCAGAGAATGATCTGTTACAGGCAGCAGTGTTCATGCTTTTACTCTTaGGTCCAATATTCCCTCACT | + |
|
Preference number: 3 (lower is better) Translates to: KSCTEQNHQRMICYRQQCSCFYS*VQYSLT Trigger: AGTGAGGGAATATTGGACCAAAGAGTAAAAGCATGA...ACACTGCTGCCTGTAACAGATCATTCTCTGGTGATTCTGCTCTGTGCAGCTCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045368.12 ENSMUST00000131520.8 |
||
| 3UTR-3UTR CAA 90 bp | TCTTGCTCAACACTGGGACAGTGGAAGTTGGTCAAGGAGAGAATCCTTTCAGATCTGATAGGAAATCCTTaGAATGGCTTTGCCACTTTG | + |
|
Preference number: 3 (lower is better) Translates to: SCSTLGQWKLVKERILSDLIGNP*NGFATL Trigger: CAAAGTGGCAAAGCCATTCAAAGGATTTCCTATCAG...ATCTGAAAGGATTCTCTCCTTGACCAACTTCCACTGTCCCAGTGTTGAGCAAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131520.8 |
||
| 3UTR GCA 72 bp | TCACCCCTTCCTTTTGGAATGGGAATGTATATTCTGTaGCATTGTGTGTTGGAAGTATGTTCCTGGCTCTCT | + |
|
Preference number: 3 (lower is better) Translates to: SPLPFGMGMYIL*HCVLEVCSWLS Trigger: AGAGAGCCAGGAACATACTTCCAACACACAATGGCACAGAATATACATTCCCATTCCAAAAGGAAGGGGTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045368.12 ENSMUST00000131520.8 |
||
| 3UTR CCA 72 bp | GAGATAAGACATTGCATTGAGTCTCTGAAGAGATCTTaGAACAGCACTGAGACTATTAACGGCTATGGGAAC | + |
|
Preference number: 3 (lower is better) Translates to: EIRHCIESLKRS*NSTETINGYGN Trigger: GTTCCCATAGCCGTTAATAGTCTCAGTGCTGTTCCAAGATCTCTTCAGAGACTCAATGCAATGTCTTATCTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045368.12 ENSMUST00000131520.8 |
||
| 3UTR CCA 72 bp | ATTCCCTCACTATGTCATCACCCCTTCCTTTTGGAATaGGAATGTATATTCTGTGCCATTGTGTGTTGGAAG | + |
|
Preference number: 3 (lower is better) Translates to: IPSLCHHPFLLE*ECIFCAIVCWK Trigger: CTTCCAACACACAATGGCACAGAATATACATTCCCATTCCAAAAGGAAGGGGTGATGACATAGTGAGGGAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045368.12 ENSMUST00000131520.8 |
||
| 3UTR-3UTR CAA 90 bp | CACTATGTCATCACCCCTTCCTTTTGGAATGGGAATGTATATTCTGTGCCATTGCATCACCCCTTCCTTTaGGAATGGGAATGTATATTC | + |
|
Preference number: 3 (lower is better) Translates to: HYVITPSFWNGNVYSVPLHHPFL*EWECIF Trigger: GAATATACATTCCCATTCCAAAAGGAAGGGGTGATG...CAATGGCACAGAATATACATTCCCATTCCAAAAGGAAGGGGTGATGACATAGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000045368.12 ENSMUST00000131520.8 |
||
| 3UTR-3UTR CAA 90 bp | TGTCAAGGTAAAATTTGGGTTGTGGCACAAATCCCAAGACACTGGAAATACAAGTTAGGACAGAAAGTCTaGATGGGGAATTGTATCACC | + |
|
Preference number: 3 (lower is better) Translates to: CQGKIWVVAQIPRHWKYKLGQKV*MGNCIT Trigger: GGTGATACAATTCCCCATCAAGACTTTCTGTCCTAA...CTTGTATTTCCAGTGTCTTGGGATTTGTGCCACAACCCAAATTTTACCTTGACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045368.12 ENSMUST00000131520.8 |
||
| 3UTR-3UTR CAA 90 bp | AACAGTTTACTCCCTGGTGACAGAACTGTAAAACCACAATCTTTCTCAGGAGCTCAAGACAGTATAGACTaGATCAGTGAAAACAAGCAC | + |
|
Preference number: 3 (lower is better) Translates to: NSLLPGDRTVKPQSFSGAQDSID*ISENKH Trigger: GTGCTTGTTTTCACTGATCAAGTCTATACTGTCTTG...AGCTCCTGAGAAAGATTGTGGTTTTACAGTTCTGTCACCAGGGAGTAAACTGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045368.12 ENSMUST00000131520.8 |
||
| 3UTR TCA 72 bp | ATGCACAGACAGACGTATAGACTGTGGGACACACTCTaGTATTCTACTTTCCACGAGATATTATCTAAGCTT | + |
|
Preference number: 3 (lower is better) Translates to: MHRQTYRLWDTL*YSTFHEILSKL Trigger: AAGCTTAGATAATATCTCGTGGAAAGTAGAATATCAGAGTGTGTCCCACAGTCTATACGTCTGTCTGTGCAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045368.12 ENSMUST00000131520.8 |
||
| 3UTR TCA 72 bp | CAGATACTTTGTTCTCAAGTCTGCTGCAATTGTTACTaGTCTGATAGGAAATCCTTTGAATGGCTTTGCCAC | + |
|
Preference number: 3 (lower is better) Translates to: QILCSQVCCNCY*SDRKSFEWLCH Trigger: GTGGCAAAGCCATTCAAAGGATTTCCTATCAGATCAGTAACAATTGCAGCAGACTTGAGAACAAAGTATCTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131520.8 |
||
| 3UTR-3UTR CAA 90 bp | GTAAGCTTTTGGTCACGTTGTTTTATCCCAGCAACAGATAGGCAACTAATACAGAAAAAGCACTTGAAGTaGTTTTCTGACGTATACGCA | + |
|
Preference number: 3 (lower is better) Translates to: VSFWSRCFIPATDRQLIQKKHLK*FSDVYA Trigger: TGCGTATACGTCAGAAAACAACTTCAAGTGCTTTTT...CTGTATTAGTTGCCTATCTGTTGCTGGGATAAAACAACGTGACCAAAAGCTTAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000045368.12 ENSMUST00000131520.8 |
||
| 3UTR CAA 72 bp | GAGTTGCTGGAGGAGGCATGCCATTGGGGGCAGGCTTaGTGTTTACAGCCAAGGTCTACTTCACTGTGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: ELLEEACHWGQA*CLQPRSTSLCA Trigger: AGCACACAGTGAAGTAGACCTTGGCTGTAAACACAAAGCCTGCCCCCAATGGCATGCCTCCTCCAGCAACTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045368.12 ENSMUST00000131520.8 |
||
| 3UTR CAA 72 bp | ACTCTGAAAGACAGCATTAAGAACCTGGCTGTTCGCTaGGAGAAAGCACCACCATACAAGAGCTGCCGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: TLKDSIKNLAVR*EKAPPYKSCRG Trigger: TCCACGGCAGCTCTTGTATGGTGGTGCTTTCTCCAAGCGAACAGCCAGGTTCTTAATGCTGTCTTTCAGAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045368.12 ENSMUST00000131520.8 |
||
| CDS-3UTR GCA 90 bp | AAGTCCCCTGGTTTGGGCAGGAGAGATGGCTCAGTGATTAAGGACAGTGACTGTACCTCTTCATACTGTTaGTGTGTCAGCAACCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: KSPGLGRRDGSVIKDSDCTSSYC*CVSNPS Trigger: AGAAGGGTTGCTGACACAGCAACAGTATGAAGAGGT...ACAGTCACTGTCCTTAATCACTGAGCCATCTCTCCTGCCCAAACCAGGGGACTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045368.12 |
||
| CDS-3UTR TCA 90 bp | AGCTCTGTTAGAAACTGTGCCCCTCCGACACGGTCAGCAACAGCCTACAAGCTTTGCTGCAATTGTTACTaGTCTGATAGGAAATCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: SSVRNCAPPTRSATAYKLCCNCY*SDRKSF Trigger: AAAGGATTTCCTATCAGATCAGTAACAATTGCAGCA...AAGCTTGTAGGCTGTTGCTGACCGTGTCGGAGGGGCACAGTTTCTAACAGAGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147763.2 |
||
| 3UTR CAA 72 bp | TTATTAGAGACTGGGGCTATTAAGAAGTCCCCTGGTTaGGGCAGGAGAGATGGCTCAGTGATTAAGGACAGT | + |
|
Preference number: 4 (lower is better) Translates to: LLETGAIKKSPG*GRRDGSVIKDS Trigger: ACTGTCCTTAATCACTGAGCCATCTCTCCTGCCCAAACCAGGGGACTTCTTAATAGCCCCAGTCTCTAATAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045368.12 ENSMUST00000131520.8 |
||
| 3UTR CAA 72 bp | AGCTGCAGGGTCTGGCTTTCATCATGCTTTTACTCTTaGGTCCAATATTCCCTCACTATGTCATCACCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: SCRVWLSSCFYS*VQYSLTMSSPL Trigger: AAGGGGTGATGACATAGTGAGGGAATATTGGACCAAAGAGTAAAAGCATGATGAAAGCCAGACCCTGCAGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045368.12 ENSMUST00000131520.8 |
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| 3UTR CAA 72 bp | TTTGGAATGGGAATGTATATTCTGTGCCATTGTGTGTaGGAAGTATGTTCCTGGCTCTCTGATTCACAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: FGMGMYILCHCV*EVCSWLSDSQG Trigger: CCCCTGTGAATCAGAGAGCCAGGAACATACTTCCAACACACAATGGCACAGAATATACATTCCCATTCCAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045368.12 ENSMUST00000131520.8 |
||
| 3UTR CAA 72 bp | AGAGGCCACTGTGAAGCTGTCAAGGTAAAATTTGGGTaGTGGCACAAATCCCAAGACACTGGAAATACAAGT | + |
|
Preference number: 4 (lower is better) Translates to: RGHCEAVKVKFG*WHKSQDTGNTS Trigger: ACTTGTATTTCCAGTGTCTTGGGATTTGTGCCACAACCCAAATTTTACCTTGACAGCTTCACAGTGGCCTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045368.12 ENSMUST00000131520.8 |
||
| CDS-3UTR CCA 90 bp | AATGTGGAACTCTGGAACTTTGGACCAGAAAAATGGGTGAATGCTGAGAGCACTCAATGTAGCCTTCAGTaGACGGCTTTTCTTGAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: NVELWNFGPEKWVNAESTQCSLQ*TAFLEE Trigger: TTCTTCAAGAAAAGCCGTCCACTGAAGGCTACATTG...AGTGCTCTCAGCATTCACCCATTTTTCTGGTCCAAAGTTCCAGAGTTCCACATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045368.12 |
||
| 3UTR CAA 72 bp | TATGGGACTTTTAGGACAGAAAGTCTTGATGGGGAATaGTATCACCAGGGCCTGTTTATAACCTCATTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: YGTFRTESLDGE*YHQGLFITSFS Trigger: GGAGAATGAGGTTATAAACAGGCCCTGGTGATACAATTCCCCATCAAGACTTTCTGTCCTAAAAGTCCCATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045368.12 ENSMUST00000131520.8 |
||
| CDS-3UTR CCA 90 bp | TCTTCCTGGCTTCAGAAAGTCACTGAGGAAACATGTGGCAGAGACAGAGTTTCTAGGAAATCCTTTGAATaGCTTTGCCACTTTGAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: SSWLQKVTEETCGRDRVSRKSFE*LCHFEE Trigger: TTCTTCAAAGTGGCAAAGCCATTCAAAGGATTTCCT...AGAAACTCTGTCTCTGCCACATGTTTCCTCAGTGACTTTCTGAAGCCAGGAAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045368.12 |
||
| 3UTR CAA 72 bp | TCCAATATTCCCTCACTATGTCATCACCCCTTCCTTTaGGAATGGGAATGTATATTCTGTGCCATTGTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: SNIPSLCHHPFL*EWECIFCAIVC Trigger: ACACACAATGGCACAGAATATACATTCCCATTCCAAAAGGAAGGGGTGATGACATAGTGAGGGAATATTGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045368.12 ENSMUST00000131520.8 |
||
| CDS-3UTR TCA 90 bp | CCCCTTCCTTTTGGAATGGGAATGTATATTCTGTGCCATTGTGTGTTGGAAGTATGCTGCAATTGTTACTaGTCTGATAGGAAATCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: PLPFGMGMYILCHCVLEVCCNCY*SDRKSF Trigger: AAAGGATTTCCTATCAGATCAGTAACAATTGCAGCA...TACTTCCAACACACAATGGCACAGAATATACATTCCCATTCCAAAAGGAAGGGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045368.12 |
||
| CDS-3UTR CCA 90 bp | CGACCTCTAACACAGCTAGATATGGTATATTCCTCTCCATCAGAGCAGTATATCAGGAAATCCTTTGAATaGCTTTGCCACTTTGAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: RPLTQLDMVYSSPSEQYIRKSFE*LCHFEE Trigger: TTCTTCAAAGTGGCAAAGCCATTCAAAGGATTTCCT...GATATACTGCTCTGATGGAGAGGAATATACCATATCTAGCTGTGTTAGAGGTCG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147763.2 |
||
| 3UTR CAA 72 bp | ATTCTACTTTCCACGAGATATTATCTAAGCTTTGTTTaGTTCGTGTGTGTGTGTGGCTTTTATTTTGGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: ILLSTRYYLSFV*FVCVCGFYFGR Trigger: CCTCCCAAAATAAAAGCCACACACACACACGAACAAAACAAAGCTTAGATAATATCTCGTGGAAAGTAGAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045368.12 ENSMUST00000131520.8 |
||
| CDS CCA 90 bp | GCCAGTGTGATGACACAGATTCGGTTGGAGTGCTGGAGTATACAGTaGTCCTCACAGGGTTTTCCTTTAACATCCGCTTTATACCAGCGA | + |
|
Preference number: 5 (lower is better) Translates to: ASVMTQIRLECWSIQ*SSQGFPLTSALYQR Trigger: TCGCTGGTATAAAGCGGATGTTAAAGGAAAACCCTGTGAGGACCACTGTATACTCCAGCACTCCAACCGAATCTGTGTCATCACACTGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045368.12 ENSMUST00000147763.2 |
||
| CDS-3UTR CAA 90 bp | TTGGGCAGGAGAGATGGCTCAGTGATTAAGGACAGTGACTGTTCTTCCAGAGGTAACCTCTTCATACTGTaGCTGTGTCAGCAACCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: LGRRDGSVIKDSDCSSRGNLFIL*LCQQPF Trigger: GAAGGGTTGCTGACACAGCAACAGTATGAAGAGGTT...ACCTCTGGAAGAACAGTCACTGTCCTTAATCACTGAGCCATCTCTCCTGCCCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045368.12 |
||
| CDS-3UTR CAA 90 bp | ATCACCCCTTCCTTTTGGAATGGGAATGTATATTCTGTGCCATTGTGTGTTGGACTGATAGGAAATCCTTaGAATGGCTTTGCCACTTTG | + |
|
Preference number: 5 (lower is better) Translates to: ITPSFWNGNVYSVPLCVGLIGNP*NGFATL Trigger: CAAAGTGGCAAAGCCATTCAAAGGATTTCCTATCAG...TCCAACACACAATGGCACAGAATATACATTCCCATTCCAAAAGGAAGGGGTGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045368.12 |
||
| CDS-3UTR CAA 90 bp | ACACAGCTAGATATGGTATATTCCTCTCCATCAGAGCAGTATATCTTACACAGACTGATAGGAAATCCTTaGAATGGCTTTGCCACTTTG | + |
|
Preference number: 5 (lower is better) Translates to: TQLDMVYSSPSEQYILHRLIGNP*NGFATL Trigger: CAAAGTGGCAAAGCCATTCAAAGGATTTCCTATCAG...TCTGTGTAAGATATACTGCTCTGATGGAGAGGAATATACCATATCTAGCTGTGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147763.2 |
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