Pregenerated sensors for ABI3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000018381Ensembl transcript IDs: ENSMUST00000059026.10, ENSMUST00000137645.2
Found 136 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCTTGGGTCCTCCTCAGGTCTTGGATGTGCCAGCGACCCTGGCTGTaGCCCGCTAATCAGCTTCTCCCTGGCCGGCTCCCGCCGCGCCGC | + |
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Preference number: 1 (lower is better) Translates to: PWVLLRSWMCQRPWL*PANQLLPGRLPPRR Trigger: GCGGCGCGGCGGGAGCCGGCCAGGGAGAAGCTGATTAGCGGGCCACAGCCAGGGTCGCTGGCACATCCAAGACCTGAGGAGGACCCAAGG 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059026.10 |
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| 3UTR CCA 90 bp | AACCAGCCTTGGGTCCTCCTCAGGTCTTGGATGTGCCAGCGACCCTaGCTGTGGCCCGCTAATCAGCTTCTCCCTGGCCGGCTCCCGCCG | + |
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Preference number: 1 (lower is better) Translates to: NQPWVLLRSWMCQRP*LWPANQLLPGRLPP Trigger: CGGCGGGAGCCGGCCAGGGAGAAGCTGATTAGCGGGCCACAGCCAGGGTCGCTGGCACATCCAAGACCTGAGGAGGACCCAAGGCTGGTT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059026.10 |
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| 3UTR GCA 90 bp | ACTCGATCGTGCGTGCCGCGCCAGGCCAGCAACTGCCCGAGAGCCTaGGTGCCACCTATCGCGAGGGCTACTACAATGAGTACATGCAAC | + |
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Preference number: 1 (lower is better) Translates to: TRSCVPRQASNCPRA*VPPIARATTMSTCN Trigger: GTTGCATGTACTCATTGTAGTAGCCCTCGCGATAGGTGGCACGCAGGCTCTCGGGCAGTTGCTGGCCTGGCGCGGCACGCACGATCGAGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059026.10 |
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| 3UTR GCA 90 bp | CCAACATCTGCAACAGGTGCTGAAGATGTGTTGAAGACCATCGCCTaGCAGGGGTGCTCGGGACAACCGACGGAGGAGGGACGGGACTGG | + |
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Preference number: 1 (lower is better) Translates to: PTSATGAEDVLKTIA*QGCSGQPTEEGRDW Trigger: CCAGTCCCGTCCCTCCTCCGTCGGTTGTCCCGAGCACCCCTGGCAGGCGATGGTCTTCAACACATCTTCAGCACCTGTTGCAGATGTTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059026.10 |
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| 3UTR GCA 90 bp | CATCTCCTGCTTAACCAGCCTTGGGTCCTCCTCAGGTCTTGGATGTaGCAGCGACCCTGGCTGTGGCCCGCTAATCAGCTTCTCCCTGGC | + |
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Preference number: 1 (lower is better) Translates to: HLLLNQPWVLLRSWM*QRPWLWPANQLLPG Trigger: GCCAGGGAGAAGCTGATTAGCGGGCCACAGCCAGGGTCGCTGGCACATCCAAGACCTGAGGAGGACCCAAGGCTGGTTAAGCAGGAGATG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059026.10 |
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| 3UTR GCA 90 bp | AGGCAAGGGACGGCGGGGTGTGGGCAGCACATTGGTTCCATCTCCTaGTTAACCAGCCTTGGGTCCTCCTCAGGTCTTGGATGTGCCAGC | + |
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Preference number: 1 (lower is better) Translates to: RQGTAGCGQHIGSIS*LTSLGSSSGLGCAS Trigger: GCTGGCACATCCAAGACCTGAGGAGGACCCAAGGCTGGTTAAGCAGGAGATGGAACCAATGTGCTGCCCACACCCCGCCGTCCCTTGCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059026.10 |
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| 3UTR CCA 90 bp | GGGGTGTGGGCAGCACATTGGTTCCATCTCCTGCTTAACCAGCCTTaGGTCCTCCTCAGGTCTTGGATGTGCCAGCGACCCTGGCTGTGG | + |
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Preference number: 1 (lower is better) Translates to: GVWAAHWFHLLLNQP*VLLRSWMCQRPWLW Trigger: CCACAGCCAGGGTCGCTGGCACATCCAAGACCTGAGGAGGACCCAAGGCTGGTTAAGCAGGAGATGGAACCAATGTGCTGCCCACACCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059026.10 |
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| 3UTR TCA 90 bp | ACACAGTTCACAGCCCAAGAGGTAGACAGGTCCTTAGTCCAGCTTTaGCTGTGGAAGCTGGCTTCCTGGGGCTCGAGAGGCCCACCGAGG | + |
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Preference number: 1 (lower is better) Translates to: TQFTAQEVDRSLVQL*LWKLASWGSRGPPR Trigger: CCTCGGTGGGCCTCTCGAGCCCCAGGAAGCCAGCTTCCACAGTCAAAGCTGGACTAAGGACCTGTCTACCTCTTGGGCTGTGAACTGTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059026.10 |
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| 3UTR CCA 90 bp | TGGTTCCATCTCCTGCTTAACCAGCCTTGGGTCCTCCTCAGGTCTTaGATGTGCCAGCGACCCTGGCTGTGGCCCGCTAATCAGCTTCTC | + |
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Preference number: 1 (lower is better) Translates to: WFHLLLNQPWVLLRS*MCQRPWLWPANQLL Trigger: GAGAAGCTGATTAGCGGGCCACAGCCAGGGTCGCTGGCACATCCAAGACCTGAGGAGGACCCAAGGCTGGTTAAGCAGGAGATGGAACCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059026.10 |
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| 3UTR CCA 90 bp | ACCCCAGCACGATTAACTGAGAGACAGGCAAGGGACGGCGGGGTGTaGGCAGCACATTGGTTCCATCTCCTGCTTAACCAGCCTTGGGTC | + |
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Preference number: 1 (lower is better) Translates to: TPARLTERQARDGGV*AAHWFHLLLNQPWV Trigger: GACCCAAGGCTGGTTAAGCAGGAGATGGAACCAATGTGCTGCCCACACCCCGCCGTCCCTTGCCTGTCTCTCAGTTAATCGTGCTGGGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059026.10 |
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| 3UTR GCA 90 bp | AGAGCCTGCGTGCCACCTATCGCGAGGGCTACTACAATGAGTACATaGAACGAGTCTTTAAGTACCTGGGTGAGCAGGGTGTACGGCCCC | + |
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Preference number: 1 (lower is better) Translates to: RACVPPIARATTMST*NESLSTWVSRVYGP Trigger: GGGGCCGTACACCCTGCTCACCCAGGTACTTAAAGACTCGTTGCATGTACTCATTGTAGTAGCCCTCGCGATAGGTGGCACGCAGGCTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059026.10 |
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| 3UTR CCA 90 bp | GGCAGACTGCAGGGCTTCCGTGTTCCCTTTCCATCACTCCCTGTCTaGCCTTCTAGCCCTTTGGAGCAACTACCAGGAGGTCAGCAGTTT | + |
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Preference number: 1 (lower is better) Translates to: GRLQGFRVPFPSLPV*PSSPLEQLPGGQQF Trigger: AAACTGCTGACCTCCTGGTAGTTGCTCCAAAGGGCTAGAAGGCCAGACAGGGAGTGATGGAAAGGGAACACGGAAGCCCTGCAGTCTGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059026.10 |
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| 3UTR CCA 90 bp | ACCCTCCTCTTTCCTTTCGCTTTGCTATGCTCCTCCGGGCATATCTaGAATTCAGTCTGCTTGTGGGCTGGGAGCAGGGGTTCAGAGCCG | + |
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Preference number: 1 (lower is better) Translates to: TLLFPFALLCSSGHI*NSVCLWAGSRGSEP Trigger: CGGCTCTGAACCCCTGCTCCCAGCCCACAAGCAGACTGAATTCCAGATATGCCCGGAGGAGCATAGCAAAGCGAAAGGAAAGAGGAGGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059026.10 |
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| 3UTR GCA 90 bp | CCTTTCGCTTTGCTATGCTCCTCCGGGCATATCTGGAATTCAGTCTaGTTGTGGGCTGGGAGCAGGGGTTCAGAGCCGTCCCTATCTATG | + |
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Preference number: 1 (lower is better) Translates to: PFALLCSSGHIWNSV*LWAGSRGSEPSLSM Trigger: CATAGATAGGGACGGCTCTGAACCCCTGCTCCCAGCCCACAAGCAGACTGAATTCCAGATATGCCCGGAGGAGCATAGCAAAGCGAAAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059026.10 |
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| 3UTR CCA 90 bp | GCCCTTTGGAGCAACTACCAGGAGGTCAGCAGTTTTATTCAAAGCTaGCGATCTTCTGAGCATGAGCTGGGGGTCCTCTGGGCAAGGTGC | + |
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Preference number: 1 (lower is better) Translates to: ALWSNYQEVSSFIQS*RSSEHELGVLWARC Trigger: GCACCTTGCCCAGAGGACCCCCAGCTCATGCTCAGAAGATCGCCAGCTTTGAATAAAACTGCTGACCTCCTGGTAGTTGCTCCAAAGGGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059026.10 |
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| 3UTR CCA 90 bp | GCTATGCTCCTCCGGGCATATCTGGAATTCAGTCTGCTTGTGGGCTaGGAGCAGGGGTTCAGAGCCGTCCCTATCTATGCAGTTAACACA | + |
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Preference number: 1 (lower is better) Translates to: AMLLRAYLEFSLLVG*EQGFRAVPIYAVNT Trigger: TGTGTTAACTGCATAGATAGGGACGGCTCTGAACCCCTGCTCCCAGCCCACAAGCAGACTGAATTCCAGATATGCCCGGAGGAGCATAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059026.10 |
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| 3UTR CCA 90 bp | GCTTTGCTATGCTCCTCCGGGCATATCTGGAATTCAGTCTGCTTGTaGGCTGGGAGCAGGGGTTCAGAGCCGTCCCTATCTATGCAGTTA | + |
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Preference number: 1 (lower is better) Translates to: ALLCSSGHIWNSVCL*AGSRGSEPSLSMQL Trigger: TAACTGCATAGATAGGGACGGCTCTGAACCCCTGCTCCCAGCCCACAAGCAGACTGAATTCCAGATATGCCCGGAGGAGCATAGCAAAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059026.10 |
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| 3UTR CCA 90 bp | TTTATTCAAAGCTGGCGATCTTCTGAGCATGAGCTGGGGGTCCTCTaGGCAAGGTGCTTAAACTCCTTGCCTTCTAGGTTTGTTTGTTTT | + |
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Preference number: 1 (lower is better) Translates to: FIQSWRSSEHELGVL*ARCLNSLPSRFVCF Trigger: AAAACAAACAAACCTAGAAGGCAAGGAGTTTAAGCACCTTGCCCAGAGGACCCCCAGCTCATGCTCAGAAGATCGCCAGCTTTGAATAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059026.10 |
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| 3UTR-3UTR CCA 90 bp | TCCTGCTCCTCTTCCCCCTGCTCCCAGGACGGCAGGATGGCTGCGCCGGGCGCGCCTTCCGCGCCCACGTaGTGCCCTGGGAAACAGCCG | + |
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Preference number: 2 (lower is better) Translates to: SCSSSPCSQDGRMAAPGAPSAPT*CPGKQP Trigger: CGGCTGTTTCCCAGGGCACCACGTGGGCGCGGAAGG...CGCGCCCGGCGCAGCCATCCTGCCGTCCTGGGAGCAGGGGGAAGAGGAGCAGGA 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059026.10 |
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| 3UTR CAA 90 bp | CTAATCAGCTTCTCCCTGGCCGGCTCCCGCCGCGCCGCCTCTCGCTaGCCTCCTCCTCCTGCTCCTCTTCCCCCTGCTCCCAGGACGGCA | + |
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Preference number: 2 (lower is better) Translates to: LISFSLAGSRRAASR*PPPPAPLPPAPRTA Trigger: TGCCGTCCTGGGAGCAGGGGGAAGAGGAGCAGGAGGAGGAGGCAAGCGAGAGGCGGCGCGGCGGGAGCCGGCCAGGGAGAAGCTGATTAG 70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059026.10 |
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| 3UTR-3UTR GCA 90 bp | CCATCGTGGACGAGAACAGCGACGACTCGATCGTGCGTGCCGCGCCAGGCCAGCTACCGCTGCGCTGGCTaGGCCTTGCTTCCTTCCCCC | + |
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Preference number: 2 (lower is better) Translates to: PSWTRTATTRSCVPRQASYRCAG*ALLPSP Trigger: GGGGGAAGGAAGCAAGGCGCAGCCAGCGCAGCGGTA...GCTGGCCTGGCGCGGCACGCACGATCGAGTCGTCGCTGTTCTCGTCCACGATGG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059026.10 |
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| 3UTR-3UTR GCA 90 bp | CCATCGTGGACGAGAACAGCGACGACTCGATCGTGCGTGCCGCGCCAGGCCAGCGCCCGAGAGCCTGCGTaGCACCTATCGCGAGGGCTA | + |
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Preference number: 2 (lower is better) Translates to: PSWTRTATTRSCVPRQASAREPA*HLSRGL Trigger: TAGCCCTCGCGATAGGTGGCACGCAGGCTCTCGGGC...GCTGGCCTGGCGCGGCACGCACGATCGAGTCGTCGCTGTTCTCGTCCACGATGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059026.10 |
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| 3UTR-3UTR CCA 90 bp | CCATCGTGGACGAGAACAGCGACGACTCGATCGTGCGTGCCGCGCCAGGCCAGCGCCCACGTGGTGCCCTaGGAAACAGCCGCCGATGTG | + |
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Preference number: 2 (lower is better) Translates to: PSWTRTATTRSCVPRQASAHVVP*ETAADV Trigger: CACATCGGCGGCTGTTTCCCAGGGCACCACGTGGGC...GCTGGCCTGGCGCGGCACGCACGATCGAGTCGTCGCTGTTCTCGTCCACGATGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059026.10 |
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| 3UTR-3UTR GCA 90 bp | ACCCCAGCACGATTAACTGAGAGACAGGCAAGGGACGGCGGGGTGTGGGCAGCAGGGCCCGCGACGGCGTaGACTTCGAGCGCCTCTTCT | + |
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Preference number: 2 (lower is better) Translates to: TPARLTERQARDGGVWAAGPATA*TSSASS Trigger: AGAAGAGGCGCTCGAAGTGCACGCCGTCGCGGGCCC...TGCTGCCCACACCCCGCCGTCCCTTGCCTGTCTCTCAGTTAATCGTGCTGGGGT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059026.10 |
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| 3UTR-3UTR GCA 90 bp | CCATCGTGGACGAGAACAGCGACGACTCGATCGTGCGTGCCGCGCCAGGCCAGCCCACCCTCTTCCCACTaGTGTATGGAGCAGGGACTG | + |
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Preference number: 2 (lower is better) Translates to: PSWTRTATTRSCVPRQASPPSSH*CMEQGL Trigger: CAGTCCCTGCTCCATACAGCAGTGGGAAGAGGGTGG...GCTGGCCTGGCGCGGCACGCACGATCGAGTCGTCGCTGTTCTCGTCCACGATGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059026.10 |
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| 3UTR-3UTR CCA 90 bp | CCATCGTGGACGAGAACAGCGACGACTCGATCGTGCGTGCCGCGCCAGGCCAGCCTTCTGAGCATGAGCTaGGGGTCCTCTGGGCAAGGT | + |
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Preference number: 2 (lower is better) Translates to: PSWTRTATTRSCVPRQASLLSMS*GSSGQG Trigger: ACCTTGCCCAGAGGACCCCCAGCTCATGCTCAGAAG...GCTGGCCTGGCGCGGCACGCACGATCGAGTCGTCGCTGTTCTCGTCCACGATGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059026.10 |
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| 3UTR-3UTR GCA 90 bp | GGGCAGCACATTGGTTCCATCTCCTGCTTAACCAGCCTTGGGTCCTCCTCAGGTCGCCAGGCCAGCAACTaGCCGAGAGCCTGCGTGCCA | + |
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Preference number: 2 (lower is better) Translates to: GQHIGSISCLTSLGSSSGRQASN*PRACVP Trigger: TGGCACGCAGGCTCTCGGGCAGTTGCTGGCCTGGCG...ACCTGAGGAGGACCCAAGGCTGGTTAAGCAGGAGATGGAACCAATGTGCTGCCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059026.10 |
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| 3UTR-3UTR CCA 90 bp | AACCTCCTCTGCCCAGTCTTTCAAACGGACTCAGGATCCCCCAATCCGCATGCCTGGAAGCTGGCTTCCTaGGGCTCGAGAGGCCCACCG | + |
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Preference number: 2 (lower is better) Translates to: NLLCPVFQTDSGSPNPHAWKLAS*GSRGPP Trigger: CGGTGGGCCTCTCGAGCCCCAGGAAGCCAGCTTCCA...GGCATGCGGATTGGGGGATCCTGAGTCCGTTTGAAAGACTGGGCAGAGGAGGTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059026.10 |
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| 3UTR-3UTR CCA 90 bp | TCCTGCTCCTCTTCCCCCTGCTCCCAGGACGGCAGGATGGCTGCGCCGGGCGCGTCCCCTTTGCCCTTATaGAACAGAAAGCCATGTTTT | + |
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Preference number: 2 (lower is better) Translates to: SCSSSPCSQDGRMAAPGASPLPL*NRKPCF Trigger: AAAACATGGCTTTCTGTTCCATAAGGGCAAAGGGGA...CGCGCCCGGCGCAGCCATCCTGCCGTCCTGGGAGCAGGGGGAAGAGGAGCAGGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059026.10 |
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| 3UTR-3UTR CCA 90 bp | CAGGCAAGGGACGGCGGGGTGTGGGCAGCACATTGGTTCCATCTCCTGCTTAACATGTGCCAGCGACCCTaGCTGTGGCCCGCTAATCAG | + |
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Preference number: 2 (lower is better) Translates to: QARDGGVWAAHWFHLLLNMCQRP*LWPANQ Trigger: CTGATTAGCGGGCCACAGCCAGGGTCGCTGGCACAT...GTTAAGCAGGAGATGGAACCAATGTGCTGCCCACACCCCGCCGTCCCTTGCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059026.10 |
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| 3UTR-3UTR CCA 90 bp | CAGGCAAGGGACGGCGGGGTGTGGGCAGCACATTGGTTCCATCTCCTGCTTAACGAGCTGGGGGTCCTCTaGGCAAGGTGCTTAAACTCC | + |
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Preference number: 2 (lower is better) Translates to: QARDGGVWAAHWFHLLLNELGVL*ARCLNS Trigger: GGAGTTTAAGCACCTTGCCCAGAGGACCCCCAGCTC...GTTAAGCAGGAGATGGAACCAATGTGCTGCCCACACCCCGCCGTCCCTTGCCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059026.10 |
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| 3UTR-3UTR CCA 90 bp | TTCAGTCTGCTTGTGGGCTGGGAGCAGGGGTTCAGAGCCGTCCCTATCTATGCAGAGGTGAGCACCCCTTaGAAGGCAGGCAGTGCCCCT | + |
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Preference number: 2 (lower is better) Translates to: FSLLVGWEQGFRAVPIYAEVSTP*KAGSAP Trigger: AGGGGCACTGCCTGCCTTCCAAGGGGTGCTCACCTC...TGCATAGATAGGGACGGCTCTGAACCCCTGCTCCCAGCCCACAAGCAGACTGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000059026.10 |
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| 3UTR-3UTR CCA 90 bp | ACCCCAGCACGATTAACTGAGAGACAGGCAAGGGACGGCGGGGTGTGGGCAGCACTGCTTAACCAGCCTTaGGTCCTCCTCAGGTCTTGG | + |
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Preference number: 2 (lower is better) Translates to: TPARLTERQARDGGVWAALLNQP*VLLRSW Trigger: CCAAGACCTGAGGAGGACCCAAGGCTGGTTAAGCAG...TGCTGCCCACACCCCGCCGTCCCTTGCCTGTCTCTCAGTTAATCGTGCTGGGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059026.10 |
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| 3UTR-3UTR TCA 90 bp | ACCCCAGCACGATTAACTGAGAGACAGGCAAGGGACGGCGGGGTGTGGGCAGCACACCTTCGACTTCGATaGGACCATCGTGGACGAGAA | + |
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Preference number: 2 (lower is better) Translates to: TPARLTERQARDGGVWAAHLRLR*DHRGRE Trigger: TTCTCGTCCACGATGGTCTCATCGAAGTCGAAGGTG...TGCTGCCCACACCCCGCCGTCCCTTGCCTGTCTCTCAGTTAATCGTGCTGGGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059026.10 |
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| 3UTR-3UTR GCA 90 bp | GGGCAGCACATTGGTTCCATCTCCTGCTTAACCAGCCTTGGGTCCTCCTCAGGTGCAGTGCAGGGTTGGTaGAGGGATAGATCCTGGGCT | + |
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Preference number: 2 (lower is better) Translates to: GQHIGSISCLTSLGSSSGAVQGW*RDRSWA Trigger: AGCCCAGGATCTATCCCTGCACCAACCCTGCACTGC...ACCTGAGGAGGACCCAAGGCTGGTTAAGCAGGAGATGGAACCAATGTGCTGCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059026.10 |
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| 3UTR CAA 90 bp | AGGCAGGCAGTGCCCCTCGAACTGAGAGGAACGGGTTCCTGGAAGTaGGGAGAAGGAACATCTCCCACTTACTTTAGCTGCTGTACCGGC | + |
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Preference number: 2 (lower is better) Translates to: RQAVPLELRGTGSWK*GEGTSPTYFSCCTG Trigger: GCCGGTACAGCAGCTAAAGTAAGTGGGAGATGTTCCTTCTCCCAACTTCCAGGAACCCGTTCCTCTCAGTTCGAGGGGCACTGCCTGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059026.10 |
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| 3UTR CAA 90 bp | TTCGCTTTGCTATGCTCCTCCGGGCATATCTGGAATTCAGTCTGCTaGTGGGCTGGGAGCAGGGGTTCAGAGCCGTCCCTATCTATGCAG | + |
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Preference number: 2 (lower is better) Translates to: FALLCSSGHIWNSVC*WAGSRGSEPSLSMQ Trigger: CTGCATAGATAGGGACGGCTCTGAACCCCTGCTCCCAGCCCACAAGCAGACTGAATTCCAGATATGCCCGGAGGAGCATAGCAAAGCGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059026.10 |
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| 3UTR-3UTR CCA 90 bp | TTCCATCTCCTGCTTAACCAGCCTTGGGTCCTCCTCAGGTCTTGGATGTGCCAGCCATCACTCCCTGTCTaGCCTTCTAGCCCTTTGGAG | + |
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Preference number: 2 (lower is better) Translates to: FHLLLNQPWVLLRSWMCQPSLPV*PSSPLE Trigger: CTCCAAAGGGCTAGAAGGCCAGACAGGGAGTGATGG...CTGGCACATCCAAGACCTGAGGAGGACCCAAGGCTGGTTAAGCAGGAGATGGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059026.10 |
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| 3UTR-3UTR TCA 90 bp | TGCATAACCTCCTCTGCCCAGTCTTTCAAACGGACTCAGGATCCCCCAATCCGCGACAGCTCTAGGTCTTaGTCTTGCTTCAGCCAACGC | + |
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Preference number: 2 (lower is better) Translates to: CITSSAQSFKRTQDPPIRDSSRS*SCFSQR Trigger: GCGTTGGCTGAAGCAAGATCAAGACCTAGAGCTGTC...GCGGATTGGGGGATCCTGAGTCCGTTTGAAAGACTGGGCAGAGGAGGTTATGCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059026.10 |
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| 3UTR-3UTR CCA 90 bp | TTCCATCTCCTGCTTAACCAGCCTTGGGTCCTCCTCAGGTCTTGGATGTGCCAGGACGGGACTGGGGATTaGTTAGGATCACCTAGTTTT | + |
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Preference number: 2 (lower is better) Translates to: FHLLLNQPWVLLRSWMCQDGTGD*LGSPSF Trigger: AAAACTAGGTGATCCTAACCAATCCCCAGTCCCGTC...CTGGCACATCCAAGACCTGAGGAGGACCCAAGGCTGGTTAAGCAGGAGATGGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059026.10 |
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| 3UTR-3UTR GCA 90 bp | TTCCATCTCCTGCTTAACCAGCCTTGGGTCCTCCTCAGGTCTTGGATGTGCCAGTATTCTCATTTCGGATaGCAACACCTTCGGTGTGGA | + |
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Preference number: 2 (lower is better) Translates to: FHLLLNQPWVLLRSWMCQYSHFG*QHLRCG Trigger: TCCACACCGAAGGTGTTGGCATCCGAAATGAGAATA...CTGGCACATCCAAGACCTGAGGAGGACCCAAGGCTGGTTAAGCAGGAGATGGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059026.10 |
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| 3UTR-3UTR GCA 90 bp | CTCAGGGAGTCCTATTTAAGTAGTGAGGGCGTGAAGAGCCCAGCGAATGGCTGCTTTTTGTATTCTTTATaGCATCTGCAGCAGTCCCCC | + |
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Preference number: 2 (lower is better) Translates to: LRESYLSSEGVKSPANGCFLYSL*HLQQSP Trigger: GGGGGACTGCTGCAGATGGCATAAAGAATACAAAAA...GCAGCCATTCGCTGGGCTCTTCACGCCCTCACTACTTAAATAGGACTCCCTGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059026.10 |
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| 3UTR CAA 90 bp | TGGTTAGGATCACCTAGTTTTACTACCCTCCTCTTTCCTTTCGCTTaGCTATGCTCCTCCGGGCATATCTGGAATTCAGTCTGCTTGTGG | + |
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Preference number: 2 (lower is better) Translates to: WLGSPSFTTLLFPFA*LCSSGHIWNSVCLW Trigger: CCACAAGCAGACTGAATTCCAGATATGCCCGGAGGAGCATAGCAAAGCGAAAGGAAAGAGGAGGGTAGTAAAACTAGGTGATCCTAACCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059026.10 |
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| 3UTR CCA 72 bp | CTCCTCAGGTCTTGGATGTGCCAGCGACCCTGGCTGTaGCCCGCTAATCAGCTTCTCCCTGGCCGGCTCCCG | + |
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Preference number: 3 (lower is better) Translates to: LLRSWMCQRPWL*PANQLLPGRLP Trigger: CGGGAGCCGGCCAGGGAGAAGCTGATTAGCGGGCCACAGCCAGGGTCGCTGGCACATCCAAGACCTGAGGAG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059026.10 |
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| 3UTR-3UTR CAA 90 bp | CTGCTGACGCTGCGGCCCTTCCACACGCACAGCTGCTCGCGCTGCCCGGCCAACGGTGCTGAAGATGTGTaGAAGACCATCGCCTGCCAG | + |
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Preference number: 3 (lower is better) Translates to: LLTLRPFHTHSCSRCPANGAEDV*KTIACQ Trigger: CTGGCAGGCGATGGTCTTCAACACATCTTCAGCACC...GTTGGCCGGGCAGCGCGAGCAGCTGTGCGTGTGGAAGGGCCGCAGCGTCAGCAG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059026.10 |
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| 3UTR GCA 72 bp | TCAGCGAATACCTGCGTGAGCGGGCCCGCGACGGCGTaGACTTCGAGCGCCTCTTCTACGTGGGTGATGGTG | + |
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Preference number: 3 (lower is better) Translates to: SANTCVSGPATA*TSSASSTWVMV Trigger: CACCATCACCCACGTAGAAGAGGCGCTCGAAGTGCACGCCGTCGCGGGCCCGCTCACGCAGGTATTCGCTGA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059026.10 |
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| 3UTR GCA 72 bp | TGCGTGCCGCGCCAGGCCAGCAACTGCCCGAGAGCCTaGGTGCCACCTATCGCGAGGGCTACTACAATGAGT | + |
|
Preference number: 3 (lower is better) Translates to: CVPRQASNCPRA*VPPIARATTMS Trigger: ACTCATTGTAGTAGCCCTCGCGATAGGTGGCACGCAGGCTCTCGGGCAGTTGCTGGCCTGGCGCGGCACGCA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059026.10 |
||
| 3UTR CCA 72 bp | TGGGTCCTCCTCAGGTCTTGGATGTGCCAGCGACCCTaGCTGTGGCCCGCTAATCAGCTTCTCCCTGGCCGG | + |
|
Preference number: 3 (lower is better) Translates to: WVLLRSWMCQRP*LWPANQLLPGR Trigger: CCGGCCAGGGAGAAGCTGATTAGCGGGCCACAGCCAGGGTCGCTGGCACATCCAAGACCTGAGGAGGACCCA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059026.10 |
||
| 3UTR GCA 72 bp | GCTGAAGATGTGTTGAAGACCATCGCCTGCCAGGGGTaGTCGGGACAACCGACGGAGGAGGGACGGGACTGG | + |
|
Preference number: 3 (lower is better) Translates to: AEDVLKTIACQG*SGQPTEEGRDW Trigger: CCAGTCCCGTCCCTCCTCCGTCGGTTGTCCCGAGCACCCCTGGCAGGCGATGGTCTTCAACACATCTTCAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059026.10 |
||
| 3UTR CCA 72 bp | CTCCTGCTTAACCAGCCTTGGGTCCTCCTCAGGTCTTaGATGTGCCAGCGACCCTGGCTGTGGCCCGCTAAT | + |
|
Preference number: 3 (lower is better) Translates to: LLLNQPWVLLRS*MCQRPWLWPAN Trigger: ATTAGCGGGCCACAGCCAGGGTCGCTGGCACATCCAAGACCTGAGGAGGACCCAAGGCTGGTTAAGCAGGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059026.10 |
||
| 3UTR CCA 72 bp | AGACAGGCAAGGGACGGCGGGGTGTGGGCAGCACATTaGTTCCATCTCCTGCTTAACCAGCCTTGGGTCCTC | + |
|
Preference number: 3 (lower is better) Translates to: RQARDGGVWAAH*FHLLLNQPWVL Trigger: GAGGACCCAAGGCTGGTTAAGCAGGAGATGGAACCAATGTGCTGCCCACACCCCGCCGTCCCTTGCCTGTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059026.10 |
||
| 3UTR TCA 72 bp | GAGCACCCCTTGGAAGGCAGGCAGTGCCCCTCGAACTaGGAGGAACGGGTTCCTGGAAGTTGGGAGAAGGAA | + |
|
Preference number: 3 (lower is better) Translates to: EHPLEGRQCPSN*EERVPGSWEKE Trigger: TTCCTTCTCCCAACTTCCAGGAACCCGTTCCTCTCAGTTCGAGGGGCACTGCCTGCCTTCCAAGGGGTGCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059026.10 |
||
| 3UTR GCA 72 bp | CTTAACCAGCCTTGGGTCCTCCTCAGGTCTTGGATGTaGCAGCGACCCTGGCTGTGGCCCGCTAATCAGCTT | + |
|
Preference number: 3 (lower is better) Translates to: LNQPWVLLRSWM*QRPWLWPANQL Trigger: AAGCTGATTAGCGGGCCACAGCCAGGGTCGCTGGCACATCCAAGACCTGAGGAGGACCCAAGGCTGGTTAAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059026.10 |
||
| 3UTR GCA 72 bp | ACGGCGGGGTGTGGGCAGCACATTGGTTCCATCTCCTaGTTAACCAGCCTTGGGTCCTCCTCAGGTCTTGGA | + |
|
Preference number: 3 (lower is better) Translates to: TAGCGQHIGSIS*LTSLGSSSGLG Trigger: TCCAAGACCTGAGGAGGACCCAAGGCTGGTTAAGCAGGAGATGGAACCAATGTGCTGCCCACACCCCGCCGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059026.10 |
||
| 3UTR TCA 72 bp | ACAGCCCAAGAGGTAGACAGGTCCTTAGTCCAGCTTTaGCTGTGGAAGCTGGCTTCCTGGGGCTCGAGAGGC | + |
|
Preference number: 3 (lower is better) Translates to: TAQEVDRSLVQL*LWKLASWGSRG Trigger: GCCTCTCGAGCCCCAGGAAGCCAGCTTCCACAGTCAAAGCTGGACTAAGGACCTGTCTACCTCTTGGGCTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059026.10 |
||
| 3UTR GCA 72 bp | TTGCTATGCTCCTCCGGGCATATCTGGAATTCAGTCTaGTTGTGGGCTGGGAGCAGGGGTTCAGAGCCGTCC | + |
|
Preference number: 3 (lower is better) Translates to: LLCSSGHIWNSV*LWAGSRGSEPS Trigger: GGACGGCTCTGAACCCCTGCTCCCAGCCCACAAGCAGACTGAATTCCAGATATGCCCGGAGGAGCATAGCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059026.10 |
||
| 3UTR CCA 72 bp | GCAGCACATTGGTTCCATCTCCTGCTTAACCAGCCTTaGGTCCTCCTCAGGTCTTGGATGTGCCAGCGACCC | + |
|
Preference number: 3 (lower is better) Translates to: AAHWFHLLLNQP*VLLRSWMCQRP Trigger: GGGTCGCTGGCACATCCAAGACCTGAGGAGGACCCAAGGCTGGTTAAGCAGGAGATGGAACCAATGTGCTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059026.10 |
||
| 3UTR TCA 72 bp | AGTGAGGGCGTGAAGAGCCCAGCGAATGGCTGCTTGTaGCGTCAGGGGCCTAATGGGAAGAGTAAAGAGGGT | + |
|
Preference number: 3 (lower is better) Translates to: SEGVKSPANGCL*RQGPNGKSKEG Trigger: ACCCTCTTTACTCTTCCCATTAGGCCCCTGACGTCACAAGCAGCCATTCGCTGGGCTCTTCACGCCCTCACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059026.10 |
||
| 3UTR CCA 72 bp | CAGGGCTTCCGTGTTCCCTTTCCATCACTCCCTGTCTaGCCTTCTAGCCCTTTGGAGCAACTACCAGGAGGT | + |
|
Preference number: 3 (lower is better) Translates to: QGFRVPFPSLPV*PSSPLEQLPGG Trigger: ACCTCCTGGTAGTTGCTCCAAAGGGCTAGAAGGCCAGACAGGGAGTGATGGAAAGGGAACACGGAAGCCCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059026.10 |
||
| 3UTR CCA 72 bp | CTCCGGGCATATCTGGAATTCAGTCTGCTTGTGGGCTaGGAGCAGGGGTTCAGAGCCGTCCCTATCTATGCA | + |
|
Preference number: 3 (lower is better) Translates to: LRAYLEFSLLVG*EQGFRAVPIYA Trigger: TGCATAGATAGGGACGGCTCTGAACCCCTGCTCCCAGCCCACAAGCAGACTGAATTCCAGATATGCCCGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059026.10 |
||
| 3UTR CCA 72 bp | CGATTAACTGAGAGACAGGCAAGGGACGGCGGGGTGTaGGCAGCACATTGGTTCCATCTCCTGCTTAACCAG | + |
|
Preference number: 3 (lower is better) Translates to: RLTERQARDGGV*AAHWFHLLLNQ Trigger: CTGGTTAAGCAGGAGATGGAACCAATGTGCTGCCCACACCCCGCCGTCCCTTGCCTGTCTCTCAGTTAATCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059026.10 |
||
| 3UTR-3UTR CAA 90 bp | TGCTCCTCCGGGCATATCTGGAATTCAGTCTGCTTGTGGGCTGGGAGCAGGGGTCCCTTGCATTCCCCTTaGCCCTTATGGAACAGAAAG | + |
|
Preference number: 3 (lower is better) Translates to: CSSGHIWNSVCLWAGSRGPLHSP*PLWNRK Trigger: CTTTCTGTTCCATAAGGGCAAAGGGGAATGCAAGGG...ACCCCTGCTCCCAGCCCACAAGCAGACTGAATTCCAGATATGCCCGGAGGAGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059026.10 |
||
| 3UTR CCA 72 bp | CGGGACAACCGACGGAGGAGGGACGGGACTGGGGATTaGTTAGGATCACCTAGTTTTACTACCCTCCTCTTT | + |
|
Preference number: 3 (lower is better) Translates to: RDNRRRRDGTGD*LGSPSFTTLLF Trigger: AAAGAGGAGGGTAGTAAAACTAGGTGATCCTAACCAATCCCCAGTCCCGTCCCTCCTCCGTCGGTTGTCCCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059026.10 |
||
| 3UTR-3UTR CAA 90 bp | TCACCTTCGACTTCGATGAGACCATCGTGGACGAGAACAGCGACGACTCGATCGGTCCTTAGTCCAGCTTaGACTGTGGAAGCTGGCTTC | + |
|
Preference number: 3 (lower is better) Translates to: SPSTSMRPSWTRTATTRSVLSPA*TVEAGF Trigger: GAAGCCAGCTTCCACAGTCAAAGCTGGACTAAGGAC...CGATCGAGTCGTCGCTGTTCTCGTCCACGATGGTCTCATCGAAGTCGAAGGTGA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059026.10 |
||
| 3UTR TCA 72 bp | CCCCCTGGGTACATGAATCTGCTGTCTACTCTGCTCTaGCACCAGAAACCTCCAACCCAGTTGAGGAGTCTC | + |
|
Preference number: 3 (lower is better) Translates to: PPGYMNLLSTLL*HQKPPTQLRSL Trigger: GAGACTCCTCAACTGGGTTGGAGGTTTCTGGTGTCAGAGCAGAGTAGACAGCAGATTCATGTACCCAGGGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059026.10 |
||
| 3UTR TCA 72 bp | GATCACGGGAAAAGGAGGCTGCTCCCCCTGGGTACATaGATCTGCTGTCTACTCTGCTCTGACACCAGAAAC | + |
|
Preference number: 3 (lower is better) Translates to: DHGKRRLLPLGT*ICCLLCSDTRN Trigger: GTTTCTGGTGTCAGAGCAGAGTAGACAGCAGATTCATGTACCCAGGGGGAGCAGCCTCCTTTTCCCGTGATC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059026.10 |
||
| 3UTR CCA 72 bp | AGCTGGCGATCTTCTGAGCATGAGCTGGGGGTCCTCTaGGCAAGGTGCTTAAACTCCTTGCCTTCTAGGTTT | + |
|
Preference number: 3 (lower is better) Translates to: SWRSSEHELGVL*ARCLNSLPSRF Trigger: AAACCTAGAAGGCAAGGAGTTTAAGCACCTTGCCCAGAGGACCCCCAGCTCATGCTCAGAAGATCGCCAGCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059026.10 |
||
| 3UTR CCA 72 bp | CAGGCAGTGCCCCTCGAACTGAGAGGAACGGGTTCCTaGAAGTTGGGAGAAGGAACATCTCCCACTTACTTT | + |
|
Preference number: 3 (lower is better) Translates to: QAVPLELRGTGS*KLGEGTSPTYF Trigger: AAAGTAAGTGGGAGATGTTCCTTCTCCCAACTTCCAGGAACCCGTTCCTCTCAGTTCGAGGGGCACTGCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059026.10 |
||
| 3UTR GCA 72 bp | GTGCCACCTATCGCGAGGGCTACTACAATGAGTACATaGAACGAGTCTTTAAGTACCTGGGTGAGCAGGGTG | + |
|
Preference number: 3 (lower is better) Translates to: VPPIARATTMST*NESLSTWVSRV Trigger: CACCCTGCTCACCCAGGTACTTAAAGACTCGTTGCATGTACTCATTGTAGTAGCCCTCGCGATAGGTGGCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059026.10 |
||
| 3UTR-3UTR CAA 90 bp | GCCCAGCGAATGGCTGCTTGTGACGTCAGGGGCCTAATGGGAAGAGTAAAGAGGAGGTGCTTAAACTCCTaGCCTTCTAGGTTTGTTTGT | + |
|
Preference number: 3 (lower is better) Translates to: AQRMAACDVRGLMGRVKRRCLNS*PSRFVC Trigger: ACAAACAAACCTAGAAGGCAAGGAGTTTAAGCACCT...CCTCTTTACTCTTCCCATTAGGCCCCTGACGTCACAAGCAGCCATTCGCTGGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059026.10 |
||
| 3UTR GCA 72 bp | GGAACATCTCCCACTTACTTTAGCTGCTGTACCGGCTaGATAACCTCCTCTGCCCAGTCTTTCAAACGGACT | + |
|
Preference number: 3 (lower is better) Translates to: GTSPTYFSCCTG*ITSSAQSFKRT Trigger: AGTCCGTTTGAAAGACTGGGCAGAGGAGGTTATGCAGCCGGTACAGCAGCTAAAGTAAGTGGGAGATGTTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059026.10 |
||
| 3UTR TCA 72 bp | AGACCTATGATGCTCTCAGAAGACAGCTCTAGGTCTTaGTCTTGCTTCAGCCAACGCAACCCTACACTACCG | + |
|
Preference number: 3 (lower is better) Translates to: RPMMLSEDSSRS*SCFSQRNPTLP Trigger: CGGTAGTGTAGGGTTGCGTTGGCTGAAGCAAGATCAAGACCTAGAGCTGTCTTCTGAGAGCATCATAGGTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059026.10 |
||
| 3UTR GCA 72 bp | GGCGATTTGTTGCAGTTCATAGCCAAACAGGGCTCCTaGTTCGAGGTTATTCTCATTTCGGATGCCAACACC | + |
|
Preference number: 3 (lower is better) Translates to: GDLLQFIAKQGS*FEVILISDANT Trigger: GGTGTTGGCATCCGAAATGAGAATAACCTCGAAGCAGGAGCCCTGTTTGGCTATGAACTGCAACAAATCGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059026.10 |
||
| 3UTR CCA 72 bp | CCTTTCCATCACTCCCTGTCTGGCCTTCTAGCCCTTTaGAGCAACTACCAGGAGGTCAGCAGTTTTATTCAA | + |
|
Preference number: 3 (lower is better) Translates to: PFHHSLSGLLAL*SNYQEVSSFIQ Trigger: TTGAATAAAACTGCTGACCTCCTGGTAGTTGCTCCAAAGGGCTAGAAGGCCAGACAGGGAGTGATGGAAAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059026.10 |
||
| 3UTR GCA 72 bp | CACCTAGTTTTACTACCCTCCTCTTTCCTTTCGCTTTaGTATGCTCCTCCGGGCATATCTGGAATTCAGTCT | + |
|
Preference number: 3 (lower is better) Translates to: HLVLLPSSFLSL*YAPPGISGIQS Trigger: AGACTGAATTCCAGATATGCCCGGAGGAGCATAGCAAAGCGAAAGGAAAGAGGAGGGTAGTAAAACTAGGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059026.10 |
||
| CDS-3UTR CCA 90 bp | TCCTGCTCCTCTTCCCCCTGCTCCCAGGACGGCAGGATGGCTGCGCCGGGCGCGGGAGAGCTTGCCGTCTaGCACGGCTGGGAGCTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: SCSSSPCSQDGRMAAPGAGELAV*HGWELH Trigger: GTGCAGCTCCCAGCCGTGCCAGACGGCAAGCTCTCC...CGCGCCCGGCGCAGCCATCCTGCCGTCCTGGGAGCAGGGGGAAGAGGAGCAGGA 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059026.10 |
||
| CDS-3UTR CCA 90 bp | CCATCGTGGACGAGAACAGCGACGACTCGATCGTGCGTGCCGCGCCAGGCCAGCGAGCCTCCCGGCCCGTaGGGATATCAAACTCCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: PSWTRTATTRSCVPRQASEPPGP*GYQTPA Trigger: TGCAGGAGTTTGATATCCCCACGGGCCGGGAGGCTC...GCTGGCCTGGCGCGGCACGCACGATCGAGTCGTCGCTGTTCTCGTCCACGATGG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059026.10 |
||
| CDS-3UTR CCA 90 bp | TGGACGAGAACAGCGACGACTCGATCGTGCGTGCCGCGCCAGGCCAGCAACTGCACTGGGGGATCCCACTaGCACCTTCCGCACTGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: WTRTATTRSCVPRQASNCTGGSH*HLPHCL Trigger: CAGGCAGTGCGGAAGGTGCCAGTGGGATCCCCCAGT...GCAGTTGCTGGCCTGGCGCGGCACGCACGATCGAGTCGTCGCTGTTCTCGTCCA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059026.10 |
||
| CDS-3UTR CCA 90 bp | TGGAAGCTGGCTTCCTGGGGCTCGAGAGGCCCACCGAGGCAGTGCAGGGTTGGTTATCCTCGCAGTAGTTaGCCACCCGTAGCAGGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: WKLASWGSRGPPRQCRVGYPRSS*PPVAGR Trigger: GCGCCCTGCTACGGGTGGCCAACTACTGCGAGGATA...ACCAACCCTGCACTGCCTCGGTGGGCCTCTCGAGCCCCAGGAAGCCAGCTTCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059026.10 |
||
| CDS-3UTR TCA 90 bp | CCATCGTGGACGAGAACAGCGACGACTCGATCGTGCGTGCCGCGCCAGGCCAGCGAATCCAGTGCCCTCTaGACTGACACCCTCACACCA | + |
|
Preference number: 4 (lower is better) Translates to: PSWTRTATTRSCVPRQASESSAL*TDTLTP Trigger: TGGTGTGAGGGTGTCAGTTCAGAGGGCACTGGATTC...GCTGGCCTGGCGCGGCACGCACGATCGAGTCGTCGCTGTTCTCGTCCACGATGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059026.10 |
||
| CDS-3UTR GCA 90 bp | TTCCATCTCCTGCTTAACCAGCCTTGGGTCCTCCTCAGGTCTTGGATGTGCCAGGCAGGGCGCTGTGGTTaGCCCGCAGAGCCTCCCGGC | + |
|
Preference number: 4 (lower is better) Translates to: FHLLLNQPWVLLRSWMCQAGRCG*PAEPPG Trigger: GCCGGGAGGCTCTGCGGGGCAACCACAGCGCCCTGC...CTGGCACATCCAAGACCTGAGGAGGACCCAAGGCTGGTTAAGCAGGAGATGGAA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059026.10 |
||
| CDS-3UTR CCA 90 bp | TCCTGCTCCTCTTCCCCCTGCTCCCAGGACGGCAGGATGGCTGCGCCGGGCGCGTGCATGTTTACCATCTaGCCCAGTGTGCTCATCTTG | + |
|
Preference number: 4 (lower is better) Translates to: SCSSSPCSQDGRMAAPGACMFTI*PSVLIL Trigger: CAAGATGAGCACACTGGGCCAGATGGTAAACATGCA...CGCGCCCGGCGCAGCCATCCTGCCGTCCTGGGAGCAGGGGGAAGAGGAGCAGGA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059026.10 |
||
| CDS-3UTR CCA 90 bp | CCAGCTTTGACTGTGGAAGCTGGCTTCCTGGGGCTCGAGAGGCCCACCGAGGCACCAGCTGGGCTCATCTaGTCCAAAACCTGGTGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: PALTVEAGFLGLERPTEAPAGLI*SKTWWG Trigger: CCCCCACCAGGTTTTGGACCAGATGAGCCCAGCTGG...TGCCTCGGTGGGCCTCTCGAGCCCCAGGAAGCCAGCTTCCACAGTCAAAGCTGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059026.10 |
||
| CDS-3UTR GCA 90 bp | CAGGCAAGGGACGGCGGGGTGTGGGCAGCACATTGGTTCCATCTCCTGCTTAACAGGCAGGGGCAACTCTaGTTCCAGAGGGGGCTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: QARDGGVWAAHWFHLLLNRQGQL*FQRGLG Trigger: TCCCAGCCCCCTCTGGAAGCAGAGTTGCCCCTGCCT...GTTAAGCAGGAGATGGAACCAATGTGCTGCCCACACCCCGCCGTCCCTTGCCTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000059026.10 |
||
| CDS-3UTR CCA 90 bp | TGGAAGCTGGCTTCCTGGGGCTCGAGAGGCCCACCGAGGCAGTGCAGGGTTGGTGGAGGGATGACTTTCTaGTTAGAGGGCAGCCGCACA | + |
|
Preference number: 4 (lower is better) Translates to: WKLASWGSRGPPRQCRVGGGMTF*LEGSRT Trigger: TGTGCGGCTGCCCTCTAACCAGAAAGTCATCCCTCC...ACCAACCCTGCACTGCCTCGGTGGGCCTCTCGAGCCCCAGGAAGCCAGCTTCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059026.10 |
||
| CDS-3UTR CCA 90 bp | CAGGCAAGGGACGGCGGGGTGTGGGCAGCACATTGGTTCCATCTCCTGCTTAACGCAGCCGCACAACAGTaGCCAAAGTGCCGATCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: QARDGGVWAAHWFHLLLNAAAQQ*PKCRSP Trigger: GGGAGATCGGCACTTTGGCCACTGTTGTGCGGCTGC...GTTAAGCAGGAGATGGAACCAATGTGCTGCCCACACCCCGCCGTCCCTTGCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059026.10 |
||
| CDS-3UTR GCA 90 bp | TCACCTTCGACTTCGATGAGACCATCGTGGACGAGAACAGCGACGACTCGATCGTGGAGGAGGCGGGGTTaGAGGCGCTACCTGTCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: SPSTSMRPSWTRTATTRSWRRRG*RRYLSL Trigger: AAGGGACAGGTAGCGCCTGCAACCCCGCCTCCTCCA...CGATCGAGTCGTCGCTGTTCTCGTCCACGATGGTCTCATCGAAGTCGAAGGTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059026.10 |
||
| CDS-3UTR GCA 90 bp | GGAGCCTGGCTCCTCCATTTATTCTTGATCCCAGGGGGATCACGGGAAAAGGAGAGGCGGGGTTACAGGTaGTACAGGTGGAGGAGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: GAWLLHLFLIPGGSREKERRGYR*YRWRRR Trigger: CCGCCTCCTCCACCTGTAGCACCTGTAACCCCGCCT...CTCCTTTTCCCGTGATCCCCCTGGGATCAAGAATAAATGGAGGAGCCAGGCTCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000059026.10 |
||
| CDS-3UTR TCA 90 bp | TGGCGATCTTCTGAGCATGAGCTGGGGGTCCTCTGGGCAAGGTGCTTAAACTCCCAGTGCCCTCTGAACTaGCACCCTCACACCAGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: WRSSEHELGVLWARCLNSQCPLN*HPHTSH Trigger: ATGGCTGGTGTGAGGGTGTCAGTTCAGAGGGCACTG...GGAGTTTAAGCACCTTGCCCAGAGGACCCCCAGCTCATGCTCAGAAGATCGCCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059026.10 |
||
| CDS-3UTR GCA 90 bp | AACCTCCTCTGCCCAGTCTTTCAAACGGACTCAGGATCCCCCAATCCGCATGCCCCGGTCCGTGACAGCTaGGTGCTCAAGTCCTTGACT | + |
|
Preference number: 4 (lower is better) Translates to: NLLCPVFQTDSGSPNPHAPVRDS*VLKSLT Trigger: AGTCAAGGACTTGAGCACGCAGCTGTCACGGACCGG...GGCATGCGGATTGGGGGATCCTGAGTCCGTTTGAAAGACTGGGCAGAGGAGGTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059026.10 |
||
| CDS-3UTR GCA 90 bp | CTCAGGGAGTCCTATTTAAGTAGTGAGGGCGTGAAGAGCCCAGCGAATGGCTGCGCGCCTTTATGCTCTTaGGAGACAGGGTCCCGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: LRESYLSSEGVKSPANGCAPLCS*ETGSRS Trigger: GGACCGGGACCCTGTCTCGCAAGAGCATAAAGGCGC...GCAGCCATTCGCTGGGCTCTTCACGCCCTCACTACTTAAATAGGACTCCCTGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059026.10 |
||
| CDS-3UTR TCA 90 bp | TCACCTTCGACTTCGATGAGACCATCGTGGACGAGAACAGCGACGACTCGATCGCTAGGGCCTGGGTGGTaGAAGCCATCGTCTCTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: SPSTSMRPSWTRTATTRSLGPGW*KPSSLP Trigger: TGGAAGAGACGATGGCTTTCACCACCCAGGCCCTAG...CGATCGAGTCGTCGCTGTTCTCGTCCACGATGGTCTCATCGAAGTCGAAGGTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059026.10 |
||
| CDS-3UTR TCA 90 bp | GCCTGCGTGCCACCTATCGCGAGGGCTACTACAATGAGTACATGCAACGAGTCTTTCTGTGGTAGGGAGTaGGGGAAGGCAGGCTCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: ACVPPIARATTMSTCNESFCGRE*GKAGSQ Trigger: CTGAGAGCCTGCCTTCCCTCACTCCCTACCACAGAA...AGACTCGTTGCATGTACTCATTGTAGTAGCCCTCGCGATAGGTGGCACGCAGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059026.10 |
||
| CDS-3UTR TCA 90 bp | TGCTCCTCCGGGCATATCTGGAATTCAGTCTGCTTGTGGGCTGGGAGCAGGGGTCCAAGCAGGCAAAGTTaGGGGGTTTTCTGTGGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: CSSGHIWNSVCLWAGSRGPSRQS*GVFCGR Trigger: CCTACCACAGAAAACCCCTCAACTTTGCCTGCTTGG...ACCCCTGCTCCCAGCCCACAAGCAGACTGAATTCCAGATATGCCCGGAGGAGCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000059026.10 |
||
| CDS-3UTR CCA 90 bp | GGAGCCTGGCTCCTCCATTTATTCTTGATCCCAGGGGGATCACGGGAAAAGGAGCCAGTGTGCTCATCTTaGCTTCTACCTGCCGCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: GAWLLHLFLIPGGSREKEPVCSS*LLPAAG Trigger: CCCTGCGGCAGGTAGAAGCCAAGATGAGCACACTGG...CTCCTTTTCCCGTGATCCCCCTGGGATCAAGAATAAATGGAGGAGCCAGGCTCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059026.10 |
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| CDS-3UTR GCA 90 bp | TTCAGTCTGCTTGTGGGCTGGGAGCAGGGGTTCAGAGCCGTCCCTATCTATGCATCAAACTCCTGCAGCTaGTGTAACTGCTGCAGCTCC | + |
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Preference number: 4 (lower is better) Translates to: FSLLVGWEQGFRAVPIYASNSCS*CNCCSS Trigger: GGAGCTGCAGCAGTTACAGCAGCTGCAGGAGTTTGA...TGCATAGATAGGGACGGCTCTGAACCCCTGCTCCCAGCCCACAAGCAGACTGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059026.10 |
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| CDS-3UTR GCA 90 bp | TTCAGTCTGCTTGTGGGCTGGGAGCAGGGGTTCAGAGCCGTCCCTATCTATGCAAGCTCATTGTCCTTTTaGCGGGTGTATGGGTACAGG | + |
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Preference number: 4 (lower is better) Translates to: FSLLVGWEQGFRAVPIYASSLSF*RVYGYR Trigger: CCTGTACCCATACACCCGGCAAAAGGACAATGAGCT...TGCATAGATAGGGACGGCTCTGAACCCCTGCTCCCAGCCCACAAGCAGACTGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059026.10 |
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| CDS-3UTR CCA 90 bp | TGGCGATCTTCTGAGCATGAGCTGGGGGTCCTCTGGGCAAGGTGCTTAAACTCCCCTTCCGCTTGTCTGTaGCCTGCAAGTAGTTATCCT | + |
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Preference number: 4 (lower is better) Translates to: WRSSEHELGVLWARCLNSPSACL*PASSYP Trigger: AGGATAACTACTTGCAGGCCACAGACAAGCGGAAGG...GGAGTTTAAGCACCTTGCCCAGAGGACCCCCAGCTCATGCTCAGAAGATCGCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059026.10 |
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| CDS-3UTR CCA 90 bp | CTACCCTCCTCTTTCCTTTCGCTTTGCTATGCTCCTCCGGGCATATCTGGAATTTACAGGTGCTACAGGTaGAGGAGGCGGGGTTGCAGG | + |
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Preference number: 4 (lower is better) Translates to: LPSSFLSLCYAPPGISGIYRCYR*RRRGCR Trigger: CCTGCAACCCCGCCTCCTCCACCTGTAGCACCTGTA...AATTCCAGATATGCCCGGAGGAGCATAGCAAAGCGAAAGGAAAGAGGAGGGTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059026.10 |
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| CDS-3UTR GCA 90 bp | AGGGGCCTAATGGGAAGAGTAAAGAGGGTTGAGATTGAGAGTCCTTCTGGGGCAGGGATATCAAACTCCTaGAGCTGCTGTAACTGCTGC | + |
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Preference number: 4 (lower is better) Translates to: RGLMGRVKRVEIESPSGAGISNS*SCCNCC Trigger: GCAGCAGTTACAGCAGCTGCAGGAGTTTGATATCCC...TGCCCCAGAAGGACTCTCAATCTCAACCCTCTTTACTCTTCCCATTAGGCCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059026.10 |
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| CDS-3UTR CCA 90 bp | TACTACAATGAGTACATGCAACGAGTCTTTAAGTACCTGGGTGAGCAGGGTGTAACCTGTCCCTTGGACTaGGGGATCCCACTGGCACCT | + |
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Preference number: 4 (lower is better) Translates to: YYNEYMQRVFKYLGEQGVTCPLD*GIPLAP Trigger: AGGTGCCAGTGGGATCCCCCAGTCCAAGGGACAGGT...TACACCCTGCTCACCCAGGTACTTAAAGACTCGTTGCATGTACTCATTGTAGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059026.10 |
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| CDS-3UTR GCA 90 bp | AGGGGCCTAATGGGAAGAGTAAAGAGGGTTGAGATTGAGAGTCCTTCTGGGGCAGCTACCTTCTCCATATaGATGTTTACCATCTGGCCC | + |
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Preference number: 4 (lower is better) Translates to: RGLMGRVKRVEIESPSGAATFSI*MFTIWP Trigger: GGGCCAGATGGTAAACATGCATATGGAGAAGGTAGC...TGCCCCAGAAGGACTCTCAATCTCAACCCTCTTTACTCTTCCCATTAGGCCCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059026.10 |
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| CDS-3UTR CCA 90 bp | TACTACAATGAGTACATGCAACGAGTCTTTAAGTACCTGGGTGAGCAGGGTGTACTCCACATAGTTCCCTaGGAAGAATCCAGTGCCCTC | + |
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Preference number: 4 (lower is better) Translates to: YYNEYMQRVFKYLGEQGVLHIVP*EESSAL Trigger: GAGGGCACTGGATTCTTCCCAGGGAACTATGTGGAG...TACACCCTGCTCACCCAGGTACTTAAAGACTCGTTGCATGTACTCATTGTAGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059026.10 |
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| CDS GCA 90 bp | GCAGAGGAGGCAGCGGAGAGCTTGCCGTCTGGCACGGCTGGGAGCTaGACCGGCTCAGGGATCCGGGGTGGTCTCCCCAGCGTGGCGGAA | + |
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Preference number: 5 (lower is better) Translates to: AEEAAESLPSGTAGS*TGSGIRGGLPSVAE Trigger: TTCCGCCACGCTGGGGAGACCACCCCGGATCCCTGAGCCGGTGCAGCTCCCAGCCGTGCCAGACGGCAAGCTCTCCGCTGCCTCCTCTGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059026.10 ENSMUST00000137645.2 |
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| CDS CCA 90 bp | GGAAGAGGCAGAGGAGGCAGCGGAGAGCTTGCCGTCTGGCACGGCTaGGAGCTGCACCGGCTCAGGGATCCGGGGTGGTCTCCCCAGCGT | + |
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Preference number: 5 (lower is better) Translates to: GRGRGGSGELAVWHG*ELHRLRDPGWSPQR Trigger: ACGCTGGGGAGACCACCCCGGATCCCTGAGCCGGTGCAGCTCCCAGCCGTGCCAGACGGCAAGCTCTCCGCTGCCTCCTCTGCCTCTTCC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059026.10 ENSMUST00000137645.2 |
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| CDS-3UTR CAA 90 bp | CTGCTGACGCTGCGGCCCTTCCACACGCACAGCTGCTCGCGCTGCCCGGCCAACGGCGCCTTTATGCTCTaGCGAGACAGGGTCCCGGTC | + |
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Preference number: 5 (lower is better) Translates to: LLTLRPFHTHSCSRCPANGAFML*RDRVPV Trigger: GACCGGGACCCTGTCTCGCAAGAGCATAAAGGCGCC...GTTGGCCGGGCAGCGCGAGCAGCTGTGCGTGTGGAAGGGCCGCAGCGTCAGCAG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059026.10 |
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| CDS CCA 90 bp | GCGGGGTTGCAGGCGCTACCTGTCCCTTGGACTGGGGGATCCCACTaGCACCTTCCGCACTGCCTGCCGAGGCCAAGGAAGAGGCAGAGG | + |
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Preference number: 5 (lower is better) Translates to: AGLQALPVPWTGGSH*HLPHCLPRPRKRQR Trigger: CCTCTGCCTCTTCCTTGGCCTCGGCAGGCAGTGCGGAAGGTGCCAGTGGGATCCCCCAGTCCAAGGGACAGGTAGCGCCTGCAACCCCGC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000059026.10 ENSMUST00000137645.2 |
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| CDS GCA 90 bp | CTGTCCCTTGGACTGGGGGATCCCACTGGCACCTTCCGCACTGCCTaGCGAGGCCAAGGAAGAGGCAGAGGAGGCAGCGGAGAGCTTGCC | + |
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Preference number: 5 (lower is better) Translates to: LSLGLGDPTGTFRTA*RGQGRGRGGSGELA Trigger: GGCAAGCTCTCCGCTGCCTCCTCTGCCTCTTCCTTGGCCTCGGCAGGCAGTGCGGAAGGTGCCAGTGGGATCCCCCAGTCCAAGGGACAG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000059026.10 ENSMUST00000137645.2 |
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| CDS GCA 90 bp | CTACCTGTCCCTTGGACTGGGGGATCCCACTGGCACCTTCCGCACTaGCTGCCGAGGCCAAGGAAGAGGCAGAGGAGGCAGCGGAGAGCT | + |
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Preference number: 5 (lower is better) Translates to: LPVPWTGGSHWHLPH*LPRPRKRQRRQRRA Trigger: AGCTCTCCGCTGCCTCCTCTGCCTCTTCCTTGGCCTCGGCAGGCAGTGCGGAAGGTGCCAGTGGGATCCCCCAGTCCAAGGGACAGGTAG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000059026.10 ENSMUST00000137645.2 |
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| CDS-3UTR CAA 90 bp | TCCTGCTCCTCTTCCCCCTGCTCCCAGGACGGCAGGATGGCTGCGCCGGGCGCGGAGAAGGAGAGCTCATaGTCCTTTTGCCGGGTGTAT | + |
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Preference number: 5 (lower is better) Translates to: SCSSSPCSQDGRMAAPGAEKESS*SFCRVY Trigger: ATACACCCGGCAAAAGGACAATGAGCTCTCCTTCTC...CGCGCCCGGCGCAGCCATCCTGCCGTCCTGGGAGCAGGGGGAAGAGGAGCAGGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059026.10 |
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| CDS GCA 90 bp | AGTTATCCTCGCAGTAGTTGGCCACCCGTAGCAGGGCGCTGTGGTTaGCCCGCAGAGCCTCCCGGCCCGTGGGGATATCAAACTCCTGCA | + |
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Preference number: 5 (lower is better) Translates to: SYPRSSWPPVAGRCG*PAEPPGPWGYQTPA Trigger: TGCAGGAGTTTGATATCCCCACGGGCCGGGAGGCTCTGCGGGGCAACCACAGCGCCCTGCTACGGGTGGCCAACTACTGCGAGGATAACT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059026.10 |
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| CDS CCA 90 bp | CCTTCCGCTTGTCTGTGGCCTGCAAGTAGTTATCCTCGCAGTAGTTaGCCACCCGTAGCAGGGCGCTGTGGTTGCCCCGCAGAGCCTCCC | + |
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Preference number: 5 (lower is better) Translates to: PSACLWPASSYPRSS*PPVAGRCGCPAEPP Trigger: GGGAGGCTCTGCGGGGCAACCACAGCGCCCTGCTACGGGTGGCCAACTACTGCGAGGATAACTACTTGCAGGCCACAGACAAGCGGAAGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059026.10 |
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| CDS GCA 90 bp | GGCGCCTTTATGCTCTTGCGAGACAGGGTCCCGGTCCGTGACAGCTaGGTGCTCAAGTCCTTGACTCCGTGGCCAATGTCATCCAAGCAG | + |
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Preference number: 5 (lower is better) Translates to: GAFMLLRDRVPVRDS*VLKSLTPWPMSSKQ Trigger: CTGCTTGGATGACATTGGCCACGGAGTCAAGGACTTGAGCACGCAGCTGTCACGGACCGGGACCCTGTCTCGCAAGAGCATAAAGGCGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059026.10 ENSMUST00000137645.2 |
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| CDS TCA 90 bp | TGTAGCAGGCGCCTTTATGCTCTTGCGAGACAGGGTCCCGGTCCGTaGCAGCTGCGTGCTCAAGTCCTTGACTCCGTGGCCAATGTCATC | + |
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Preference number: 5 (lower is better) Translates to: CSRRLYALARQGPGP*QLRAQVLDSVANVI Trigger: GATGACATTGGCCACGGAGTCAAGGACTTGAGCACGCAGCTGTCACGGACCGGGACCCTGTCTCGCAAGAGCATAAAGGCGCCTGCTACA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059026.10 ENSMUST00000137645.2 |
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| CDS GCA 90 bp | TGCATGTTTACCATCTGGCCCAGTGTGCTCATCTTGGCTTCTACCTaGCGCAGGGCAGCACCCTGTAGATCCAGCATTCGAAGAGTATGC | + |
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Preference number: 5 (lower is better) Translates to: CMFTIWPSVLILAST*RRAAPCRSSIRRVC Trigger: GCATACTCTTCGAATGCTGGATCTACAGGGTGCTGCCCTGCGGCAGGTAGAAGCCAAGATGAGCACACTGGGCCAGATGGTAAACATGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059026.10 |
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| CDS CCA 90 bp | GGTGCCTTCAGAGAAGGAGAGCTCATTGTCCTTTTGCCGGGTGTATaGGTACAGGGTCACCACTTTCTCCAAGTAGCTAGCAGGGACCCA | + |
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Preference number: 5 (lower is better) Translates to: GAFREGELIVLLPGV*VQGHHFLQVASRDP Trigger: TGGGTCCCTGCTAGCTACTTGGAGAAAGTGGTGACCCTGTACCCATACACCCGGCAAAAGGACAATGAGCTCTCCTTCTCTGAAGGCACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059026.10 ENSMUST00000137645.2 |
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| CDS CAA 90 bp | CTGCCTGCCGAGGCCAAGGAAGAGGCAGAGGAGGCAGCGGAGAGCTaGCCGTCTGGCACGGCTGGGAGCTGCACCGGCTCAGGGATCCGG | + |
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Preference number: 6 (lower is better) Translates to: LPAEAKEEAEEAAES*PSGTAGSCTGSGIR Trigger: CCGGATCCCTGAGCCGGTGCAGCTCCCAGCCGTGCCAGACGGCAAGCTCTCCGCTGCCTCCTCTGCCTCTTCCTTGGCCTCGGCAGGCAG 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059026.10 ENSMUST00000137645.2 |
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| CDS CCA 72 bp | CACGGCTGGGAGCTGCACCGGCTCAGGGATCCGGGGTaGTCTCCCCAGCGTGGCGGAAACAGGTGTAGCAGG | + |
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Preference number: 6 (lower is better) Translates to: HGWELHRLRDPG*SPQRGGNRCSR Trigger: CCTGCTACACCTGTTTCCGCCACGCTGGGGAGACCACCCCGGATCCCTGAGCCGGTGCAGCTCCCAGCCGTG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059026.10 ENSMUST00000137645.2 |
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| CDS CCA 72 bp | AGAGGAGGCAGCGGAGAGCTTGCCGTCTGGCACGGCTaGGAGCTGCACCGGCTCAGGGATCCGGGGTGGTCT | + |
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Preference number: 6 (lower is better) Translates to: RGGSGELAVWHG*ELHRLRDPGWS Trigger: AGACCACCCCGGATCCCTGAGCCGGTGCAGCTCCCAGCCGTGCCAGACGGCAAGCTCTCCGCTGCCTCCTCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059026.10 ENSMUST00000137645.2 |
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| CDS GCA 72 bp | CGCAGTAGTTGGCCACCCGTAGCAGGGCGCTGTGGTTaGCCCGCAGAGCCTCCCGGCCCGTGGGGATATCAA | + |
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Preference number: 6 (lower is better) Translates to: RSSWPPVAGRCG*PAEPPGPWGYQ Trigger: TTGATATCCCCACGGGCCGGGAGGCTCTGCGGGGCAACCACAGCGCCCTGCTACGGGTGGCCAACTACTGCG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059026.10 |
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| CDS GCA 72 bp | CTCGGCAGACAACGGTGGAGGAGGCGGGGTTACAGGTaGTACAGGTGGAGGAGGCGGGGTTGCAGGCGCTAC | + |
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Preference number: 6 (lower is better) Translates to: LGRQRWRRRGYR*YRWRRRGCRRY Trigger: GTAGCGCCTGCAACCCCGCCTCCTCCACCTGTAGCACCTGTAACCCCGCCTCCTCCACCGTTGTCTGCCGAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059026.10 ENSMUST00000137645.2 |
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| CDS CCA 72 bp | CGGAGGGGGCGGCAAGAAGACCTCGGCAGACAACGGTaGAGGAGGCGGGGTTACAGGTGCTACAGGTGGAGG | + |
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Preference number: 6 (lower is better) Translates to: RRGRQEDLGRQR*RRRGYRCYRWR Trigger: CCTCCACCTGTAGCACCTGTAACCCCGCCTCCTCCACCGTTGTCTGCCGAGGTCTTCTTGCCGCCCCCTCCG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000059026.10 ENSMUST00000137645.2 |
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| CDS CCA 72 bp | GGGCGCTGTGGTTGCCCCGCAGAGCCTCCCGGCCCGTaGGGATATCAAACTCCTGCAGCTGCTGTAACTGCT | + |
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Preference number: 6 (lower is better) Translates to: GRCGCPAEPPGP*GYQTPAAAVTA Trigger: AGCAGTTACAGCAGCTGCAGGAGTTTGATATCCCCACGGGCCGGGAGGCTCTGCGGGGCAACCACAGCGCCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059026.10 |
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| CDS CCA 72 bp | CAACGGTGGAGGAGGCGGGGTTACAGGTGCTACAGGTaGAGGAGGCGGGGTTGCAGGCGCTACCTGTCCCTT | + |
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Preference number: 6 (lower is better) Translates to: QRWRRRGYRCYR*RRRGCRRYLSL Trigger: AAGGGACAGGTAGCGCCTGCAACCCCGCCTCCTCCACCTGTAGCACCTGTAACCCCGCCTCCTCCACCGTTG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059026.10 ENSMUST00000137645.2 |
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| CDS CCA 72 bp | CTCCAAGTAGCTAGCAGGGACCCAGCTGGGCTCATCTaGTCCAAAACCTGGTGGGGGCGGAGGCAGCAGCCC | + |
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Preference number: 6 (lower is better) Translates to: LQVASRDPAGLI*SKTWWGRRQQP Trigger: GGGCTGCTGCCTCCGCCCCCACCAGGTTTTGGACCAGATGAGCCCAGCTGGGTCCCTGCTAGCTACTTGGAG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000059026.10 ENSMUST00000137645.2 |
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| CDS CAA 90 bp | CTCCCCAGCGTGGCGGAAACAGGTGTAGCAGGCGCCTTTATGCTCTaGCGAGACAGGGTCCCGGTCCGTGACAGCTGCGTGCTCAAGTCC | + |
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Preference number: 6 (lower is better) Translates to: LPSVAETGVAGAFML*RDRVPVRDSCVLKS Trigger: GGACTTGAGCACGCAGCTGTCACGGACCGGGACCCTGTCTCGCAAGAGCATAAAGGCGCCTGCTACACCTGTTTCCGCCACGCTGGGGAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059026.10 ENSMUST00000137645.2 |
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| CDS TCA 72 bp | CGCCTTTATGCTCTTGCGAGACAGGGTCCCGGTCCGTaGCAGCTGCGTGCTCAAGTCCTTGACTCCGTGGCC | + |
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Preference number: 6 (lower is better) Translates to: RLYALARQGPGP*QLRAQVLDSVA Trigger: GGCCACGGAGTCAAGGACTTGAGCACGCAGCTGTCACGGACCGGGACCCTGTCTCGCAAGAGCATAAAGGCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059026.10 ENSMUST00000137645.2 |
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| CDS CAA 72 bp | GTGGCGGAAACAGGTGTAGCAGGCGCCTTTATGCTCTaGCGAGACAGGGTCCCGGTCCGTGACAGCTGCGTG | + |
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Preference number: 6 (lower is better) Translates to: VAETGVAGAFML*RDRVPVRDSCV Trigger: CACGCAGCTGTCACGGACCGGGACCCTGTCTCGCAAGAGCATAAAGGCGCCTGCTACACCTGTTTCCGCCAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059026.10 ENSMUST00000137645.2 |
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| CDS CCA 72 bp | TGTCTGTGGCCTGCAAGTAGTTATCCTCGCAGTAGTTaGCCACCCGTAGCAGGGCGCTGTGGTTGCCCCGCA | + |
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Preference number: 6 (lower is better) Translates to: CLWPASSYPRSS*PPVAGRCGCPA Trigger: TGCGGGGCAACCACAGCGCCCTGCTACGGGTGGCCAACTACTGCGAGGATAACTACTTGCAGGCCACAGACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059026.10 |
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| CDS GCA 72 bp | ATGCTCTTGCGAGACAGGGTCCCGGTCCGTGACAGCTaGGTGCTCAAGTCCTTGACTCCGTGGCCAATGTCA | + |
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Preference number: 6 (lower is better) Translates to: MLLRDRVPVRDS*VLKSLTPWPMS Trigger: TGACATTGGCCACGGAGTCAAGGACTTGAGCACGCAGCTGTCACGGACCGGGACCCTGTCTCGCAAGAGCAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059026.10 ENSMUST00000137645.2 |
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| CDS CCA 72 bp | GTCCGTGACAGCTGCGTGCTCAAGTCCTTGACTCCGTaGCCAATGTCATCCAAGCAGGCAAAGTTGAGGGGT | + |
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Preference number: 6 (lower is better) Translates to: VRDSCVLKSLTP*PMSSKQAKLRG Trigger: ACCCCTCAACTTTGCCTGCTTGGATGACATTGGCCACGGAGTCAAGGACTTGAGCACGCAGCTGTCACGGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059026.10 ENSMUST00000137645.2 |
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| CDS CAA 90 bp | CGGCGAGTGACACAGATGACGGTGCCTTCAGAGAAGGAGAGCTCATaGTCCTTTTGCCGGGTGTATGGGTACAGGGTCACCACTTTCTCC | + |
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Preference number: 6 (lower is better) Translates to: RRVTQMTVPSEKESS*SFCRVYGYRVTTFS Trigger: GGAGAAAGTGGTGACCCTGTACCCATACACCCGGCAAAAGGACAATGAGCTCTCCTTCTCTGAAGGCACCGTCATCTGTGTCACTCGCCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059026.10 ENSMUST00000137645.2 |
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| CDS CCA 72 bp | AAGCCATCGTCTCTTCCAGCGCCTTCCGCTTGTCTGTaGCCTGCAAGTAGTTATCCTCGCAGTAGTTGGCCA | + |
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Preference number: 6 (lower is better) Translates to: KPSSLPAPSACL*PASSYPRSSWP Trigger: TGGCCAACTACTGCGAGGATAACTACTTGCAGGCCACAGACAAGCGGAAGGCGCTGGAAGAGACGATGGCTT 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059026.10 |
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| CDS CAA 90 bp | GACACAGATGACGGTGCCTTCAGAGAAGGAGAGCTCATTGTCCTTTaGCCGGGTGTATGGGTACAGGGTCACCACTTTCTCCAAGTAGCT | + |
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Preference number: 6 (lower is better) Translates to: DTDDGAFREGELIVL*PGVWVQGHHFLQVA Trigger: AGCTACTTGGAGAAAGTGGTGACCCTGTACCCATACACCCGGCAAAAGGACAATGAGCTCTCCTTCTCTGAAGGCACCGTCATCTGTGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059026.10 ENSMUST00000137645.2 |
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| CDS CCA 72 bp | CTTCTAGCTACCTTCTCCATATGCATGTTTACCATCTaGCCCAGTGTGCTCATCTTGGCTTCTACCTGCCGC | + |
|
Preference number: 6 (lower is better) Translates to: LLATFSICMFTI*PSVLILASTCR Trigger: GCGGCAGGTAGAAGCCAAGATGAGCACACTGGGCCAGATGGTAAACATGCATATGGAGAAGGTAGCTAGAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059026.10 |
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| CDS CCA 72 bp | AGAGAAGGAGAGCTCATTGTCCTTTTGCCGGGTGTATaGGTACAGGGTCACCACTTTCTCCAAGTAGCTAGC | + |
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Preference number: 6 (lower is better) Translates to: REGELIVLLPGV*VQGHHFLQVAS Trigger: GCTAGCTACTTGGAGAAAGTGGTGACCCTGTACCCATACACCCGGCAAAAGGACAATGAGCTCTCCTTCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059026.10 ENSMUST00000137645.2 |
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