Pregenerated sensors for ABI2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026782Ensembl transcript IDs: ENSMUST00000052332.15, ENSMUST00000185788.7, ENSMUST00000186097.7, ENSMUST00000187400.7, ENSMUST00000187709.7, ENSMUST00000188594.7, ENSMUST00000188618.7, ENSMUST00000189082.7, ENSMUST00000189980.7, ENSMUST00000190158.2
Found 374 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GTTAGCCCCAAAGCAGAGGCAATGAGCATCCAATGTCACAGATTCTaGAGGAAGAGAAATCCAAGGGTGTACAGTATTCCTGAGAAAGAT | + |
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Preference number: 1 (lower is better) Translates to: VSPKAEAMSIQCHRF*RKRNPRVYSIPEKD Trigger: ATCTTTCTCAGGAATACTGTACACCCTTGGATTTCTCTTCCTGCAGAATCTGTGACATTGGATGCTCATTGCCTCTGCTTTGGGGCTAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052332.15 ENSMUST00000185788.7 ENSMUST00000189980.7 |
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| 3UTR TCA 90 bp | TGTCTGAAACAAACAAAACCTACAACCTTAAAGCAAAAGAGGTCTTaGGAAGAACACTGTCTGGGTCCGAGTTGCACAGTGAAGCCTCAG | + |
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Preference number: 1 (lower is better) Translates to: CLKQTKPTTLKQKRS*EEHCLGPSCTVKPQ Trigger: CTGAGGCTTCACTGTGCAACTCGGACCCAGACAGTGTTCTTCTCAAGACCTCTTTTGCTTTAAGGTTGTAGGTTTTGTTTGTTTCAGACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000052332.15 ENSMUST00000188618.7 ENSMUST00000189980.7 |
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| 3UTR CCA 90 bp | TGCAAACCCCAACTCAGCAGGAGTCCAGAAGATAAACTGTATTCCTaGTGCCTACCACCAGTTGTTTCTATGACTACAAAAGCTAGTTGT | + |
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Preference number: 1 (lower is better) Translates to: CKPQLSRSPEDKLYS*CLPPVVSMTTKASC Trigger: ACAACTAGCTTTTGTAGTCATAGAAACAACTGGTGGTAGGCACCAGGAATACAGTTTATCTTCTGGACTCCTGCTGAGTTGGGGTTTGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000052332.15 ENSMUST00000188618.7 ENSMUST00000189980.7 |
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| 3UTR GCA 90 bp | AAACCCCAACTCAGCAGGAGTCCAGAAGATAAACTGTATTCCTGGTaGCTACCACCAGTTGTTTCTATGACTACAAAAGCTAGTTGTTTG | + |
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Preference number: 1 (lower is better) Translates to: KPQLSRSPEDKLYSW*LPPVVSMTTKASCL Trigger: CAAACAACTAGCTTTTGTAGTCATAGAAACAACTGGTGGTAGGCACCAGGAATACAGTTTATCTTCTGGACTCCTGCTGAGTTGGGGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000052332.15 ENSMUST00000188618.7 ENSMUST00000189980.7 |
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| 3UTR CCA 90 bp | CAGGAGGAGACTTATTTTTCTATAGCTGAGAGATTGAAAATGACTTaGCATCAGCTAACACTGCCATTGATAATGGTCCAAGAGCATGGT | + |
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Preference number: 1 (lower is better) Translates to: QEETYFSIAERLKMT*HQLTLPLIMVQEHG Trigger: ACCATGCTCTTGGACCATTATCAATGGCAGTGTTAGCTGATGCCAAGTCATTTTCAATCTCTCAGCTATAGAAAAATAAGTCTCCTCCTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000052332.15 ENSMUST00000189980.7 |
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| 3UTR CCA 90 bp | GACCAGAGCCCTCAGTACCTGTGTCTTGGTAAAGTGGTTGCATTCTaGTCAGCAAAGTTTCAACATTTGTTTAAAATTCCTAATATCAAC | + |
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Preference number: 1 (lower is better) Translates to: DQSPQYLCLGKVVAF*SAKFQHLFKIPNIN Trigger: GTTGATATTAGGAATTTTAAACAAATGTTGAAACTTTGCTGACCAGAATGCAACCACTTTACCAAGACACAGGTACTGAGGGCTCTGGTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052332.15 ENSMUST00000188618.7 ENSMUST00000189980.7 |
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| 3UTR-3UTR GCA 90 bp | GGGCGGTGGTGGCGCACGCCTTTAGTCCCAGCACTCGGCAGGCAGAGGCAGGTGCACCACATTTCACATTaGTTTCACTGGCTGCTATCA | + |
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Preference number: 2 (lower is better) Translates to: GRWWRTPLVPALGRQRQVHHISH*FHWLLS Trigger: TGATAGCAGCCAGTGAAAGCAATGTGAAATGTGGTG...CACCTGCCTCTGCCTGCCGAGTGCTGGGACTAAAGGCGTGCGCCACCACCGCCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052332.15 ENSMUST00000189980.7 |
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| 3UTR-3UTR GCA 90 bp | GGGCGGTGGTGGCGCACGCCTTTAGTCCCAGCACTCGGCAGGCAGAGGCAGGTGCAGTGCCTTATAGTCTaGTTTTCTTCACATCTACAA | + |
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Preference number: 2 (lower is better) Translates to: GRWWRTPLVPALGRQRQVQCLIV*FSSHLQ Trigger: TTGTAGATGTGAAGAAAAGCAGACTATAAGGCACTG...CACCTGCCTCTGCCTGCCGAGTGCTGGGACTAAAGGCGTGCGCCACCACCGCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052332.15 ENSMUST00000188618.7 ENSMUST00000189980.7 |
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| 3UTR-3UTR GCA 90 bp | TCTTCCACCAAAGCCCTTTGCAGGCGTAAAGGCGGCCTTCGGGAGACACCATGTACCAAAACAGCCTGCTaGTCCTGGTACAGTGGCTCC | + |
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Preference number: 2 (lower is better) Translates to: SSTKALCRRKGGLRETPCTKTAC*SWYSGS Trigger: GGAGCCACTGTACCAGGAGCAGCAGGCTGTTTTGGT...ACATGGTGTCTCCCGAAGGCCGCCTTTACGCCTGCAAAGGGCTTTGGTGGAAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052332.15 ENSMUST00000188618.7 |
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| 3UTR-3UTR CCA 90 bp | AAAAGTGTGAGCCGGGCGGTGGTGGCGCACGCCTTTAGTCCCAGCACTCGGCAGTCACATTGCTTTCACTaGCTGCTATCAGCAATGCAG | + |
|
Preference number: 2 (lower is better) Translates to: KSVSRAVVAHAFSPSTRQSHCFH*LLSAMQ Trigger: CTGCATTGCTGATAGCAGCCAGTGAAAGCAATGTGA...CTGCCGAGTGCTGGGACTAAAGGCGTGCGCCACCACCGCCCGGCTCACACTTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052332.15 ENSMUST00000189980.7 |
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| 3UTR-3UTR CCA 90 bp | CTTCCACCAAAGCCCTTTGCAGGCGTAAAGGCGGCCTTCGGGAGACACCATGTTCTTCATTCATTTCACTaGGAGGAAATTCCCAGGGCC | + |
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Preference number: 2 (lower is better) Translates to: LPPKPFAGVKAAFGRHHVLHSFH*EEIPRA Trigger: GGCCCTGGGAATTTCCTCCCAGTGAAATGAATGAAG...AACATGGTGTCTCCCGAAGGCCGCCTTTACGCCTGCAAAGGGCTTTGGTGGAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052332.15 |
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| 3UTR-3UTR TCA 90 bp | TCTTCCACCAAAGCCCTTTGCAGGCGTAAAGGCGGCCTTCGGGAGACACCATGTGACCTAACAAATCCATaGAGTGGAACGTGTGCTAGA | + |
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Preference number: 2 (lower is better) Translates to: SSTKALCRRKGGLRETPCDLTNP*SGTCAR Trigger: TCTAGCACACGTTCCACTTCATGGATTTGTTAGGTC...ACATGGTGTCTCCCGAAGGCCGCCTTTACGCCTGCAAAGGGCTTTGGTGGAAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052332.15 ENSMUST00000188618.7 |
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| 3UTR-3UTR GCA 90 bp | CTTCCACCAAAGCCCTTTGCAGGCGTAAAGGCGGCCTTCGGGAGACACCATGTTAAACTGTATTCCTGGTaGCTACCACCAGTTGTTTCT | + |
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Preference number: 2 (lower is better) Translates to: LPPKPFAGVKAAFGRHHVKLYSW*LPPVVS Trigger: AGAAACAACTGGTGGTAGGCACCAGGAATACAGTTT...AACATGGTGTCTCCCGAAGGCCGCCTTTACGCCTGCAAAGGGCTTTGGTGGAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052332.15 ENSMUST00000188618.7 |
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| 3UTR-3UTR TCA 90 bp | TCTTCCACCAAAGCCCTTTGCAGGCGTAAAGGCGGCCTTCGGGAGACACCATGTGGAAGACACCATGTCTaGAACAAACAAAACCTACAA | + |
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Preference number: 2 (lower is better) Translates to: SSTKALCRRKGGLRETPCGRHHV*NKQNLQ Trigger: TTGTAGGTTTTGTTTGTTTCAGACATGGTGTCTTCC...ACATGGTGTCTCCCGAAGGCCGCCTTTACGCCTGCAAAGGGCTTTGGTGGAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052332.15 ENSMUST00000188618.7 |
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| 3UTR-3UTR TCA 90 bp | TTCATCTGGAGGTGCTTAATGGCGCACACAAGGAATGTTACTGACAACAGTTGTTCTGACTTCCTGCTCTaGAACAGCCTAAGGCTGGAG | + |
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Preference number: 2 (lower is better) Translates to: FIWRCLMAHTRNVTDNSCSDFLL*NSLRLE Trigger: CTCCAGCCTTAGGCTGTTTCAGAGCAGGAAGTCAGA...ACAACTGTTGTCAGTAACATTCCTTGTGTGCGCCATTAAGCACCTCCAGATGAA 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052332.15 |
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| 3UTR-3UTR TCA 90 bp | TATACTGAAAGTAAAGGGCAAGGGTGTCCACCAGGCCATGAGGTTAGCCCCAAAGGTGTACAGTATTCCTaGGAAAGATCCCAGATATTT | + |
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Preference number: 2 (lower is better) Translates to: YTESKGQGCPPGHEVSPKGVQYS*ERSQIF Trigger: AAATATCTGGGATCTTTCTCAGGAATACTGTACACC...TTTGGGGCTAACCTCATGGCCTGGTGGACACCCTTGCCCTTTACTTTCAGTATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052332.15 ENSMUST00000185788.7 ENSMUST00000189980.7 |
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| 3UTR-3UTR TCA 90 bp | CTTTCCTCTCCATATACTGAAAGTAAAGGGCAAGGGTGTCCACCAGGCCATGAGGGTGTACAGTATTCCTaGGAAAGATCCCAGATATTT | + |
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Preference number: 2 (lower is better) Translates to: LSSPYTESKGQGCPPGHEGVQYS*ERSQIF Trigger: AAATATCTGGGATCTTTCTCAGGAATACTGTACACC...CTCATGGCCTGGTGGACACCCTTGCCCTTTACTTTCAGTATATGGAGAGGAAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052332.15 ENSMUST00000185788.7 ENSMUST00000189980.7 |
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| 3UTR CAA 90 bp | ATGTCTGAAACAAACAAAACCTACAACCTTAAAGCAAAAGAGGTCTaGAGAAGAACACTGTCTGGGTCCGAGTTGCACAGTGAAGCCTCA | + |
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Preference number: 2 (lower is better) Translates to: MSETNKTYNLKAKEV*RRTLSGSELHSEAS Trigger: TGAGGCTTCACTGTGCAACTCGGACCCAGACAGTGTTCTTCTCAAGACCTCTTTTGCTTTAAGGTTGTAGGTTTTGTTTGTTTCAGACAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000052332.15 ENSMUST00000188618.7 ENSMUST00000189980.7 |
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| 3UTR-3UTR TCA 90 bp | TATTCCTGGTGCCTACCACCAGTTGTTTCTATGACTACAAAAGCTAGTTGTTTGAAGCAAAAGAGGTCTTaGGAAGAACACTGTCTGGGT | + |
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Preference number: 2 (lower is better) Translates to: YSWCLPPVVSMTTKASCLKQKRS*EEHCLG Trigger: ACCCAGACAGTGTTCTTCTCAAGACCTCTTTTGCTT...CAAACAACTAGCTTTTGTAGTCATAGAAACAACTGGTGGTAGGCACCAGGAATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000052332.15 ENSMUST00000188618.7 ENSMUST00000189980.7 |
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| 3UTR-3UTR TCA 90 bp | TATTCCTGGTGCCTACCACCAGTTGTTTCTATGACTACAAAAGCTAGTTGTTTGGACCTAACAAATCCATaGAGTGGAACGTGTGCTAGA | + |
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Preference number: 2 (lower is better) Translates to: YSWCLPPVVSMTTKASCLDLTNP*SGTCAR Trigger: TCTAGCACACGTTCCACTTCATGGATTTGTTAGGTC...CAAACAACTAGCTTTTGTAGTCATAGAAACAACTGGTGGTAGGCACCAGGAATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052332.15 ENSMUST00000188618.7 ENSMUST00000189980.7 |
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| 3UTR-3UTR GCA 90 bp | TATTCCTGGTGCCTACCACCAGTTGTTTCTATGACTACAAAAGCTAGTTGTTTGCCAGTGGAGTGTCAGTaGCTTATAGTCTGCTTTTCT | + |
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Preference number: 2 (lower is better) Translates to: YSWCLPPVVSMTTKASCLPVECQ*LIVCFS Trigger: AGAAAAGCAGACTATAAGGCACTGACACTCCACTGG...CAAACAACTAGCTTTTGTAGTCATAGAAACAACTGGTGGTAGGCACCAGGAATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000052332.15 ENSMUST00000188618.7 ENSMUST00000189980.7 |
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| 3UTR-3UTR CCA 90 bp | CAATCTAGACAGCATAATGCAAATGACAGCAAGAAGATCCACTTGTTCAGACTTCTTCATTCATTTCACTaGGAGGAAATTCCCAGGGCC | + |
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Preference number: 2 (lower is better) Translates to: QSRQHNANDSKKIHLFRLLHSFH*EEIPRA Trigger: GGCCCTGGGAATTTCCTCCCAGTGAAATGAATGAAG...AAGTCTGAACAAGTGGATCTTCTTGCTGTCATTTGCATTATGCTGTCTAGATTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000052332.15 ENSMUST00000185788.7 ENSMUST00000187709.7 ENSMUST00000189980.7 ENSMUST00000190158.2 |
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| 3UTR-3UTR CCA 90 bp | GTTAAACGTTCATATACAGTCTTGCTTGGGTCCATAATGGAACTAAAGGTTCAGCTTCATTCATTTCACTaGGAGGAAATTCCCAGGGCC | + |
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Preference number: 2 (lower is better) Translates to: VKRSYTVLLGSIMELKVQLHSFH*EEIPRA Trigger: GGCCCTGGGAATTTCCTCCCAGTGAAATGAATGAAG...CTGAACCTTTAGTTCCATTATGGACCCAAGCAAGACTGTATATGAACGTTTAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052332.15 ENSMUST00000189980.7 |
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| 3UTR-3UTR TCA 90 bp | GTCACAGATTCTGCAGGAAGAGAAATCCAAGGGTGTACAGTATTCCTGAGAAAGTTGGCTTTCAGTTTTTaGTACAAGGGGATAAACCAA | + |
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Preference number: 2 (lower is better) Translates to: VTDSAGREIQGCTVFLRKLAFSF*YKGINQ Trigger: TTGGTTTATCCCCTTGTATCAAAAACTGAAAGCCAA...CTTTCTCAGGAATACTGTACACCCTTGGATTTCTCTTCCTGCAGAATCTGTGAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000052332.15 ENSMUST00000185788.7 ENSMUST00000189980.7 ENSMUST00000190158.2 |
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| 3UTR-3UTR TCA 90 bp | CATCCTTATAATCTACAAACAGGACAGGGTGCAAGGGAGTTCAAGGTTAACTCAGGTGTACAGTATTCCTaGGAAAGATCCCAGATATTT | + |
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Preference number: 2 (lower is better) Translates to: HPYNLQTGQGAREFKVNSGVQYS*ERSQIF Trigger: AAATATCTGGGATCTTTCTCAGGAATACTGTACACC...TGAGTTAACCTTGAACTCCCTTGCACCCTGTCCTGTTTGTAGATTATAAGGATG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052332.15 ENSMUST00000185788.7 ENSMUST00000189980.7 |
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| 3UTR-3UTR TCA 90 bp | CATGTTCTCCATGAGGAGAAAAGAGTAAAGCAAGCTGTACTGCAGAAAGGTGACGCACACTCTTCACTCTaGATCACAAAATTCAGAATA | + |
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Preference number: 2 (lower is better) Translates to: HVLHEEKRVKQAVLQKGDAHSSL*ITKFRI Trigger: TATTCTGAATTTTGTGATTCAGAGTGAAGAGTGTGC...GTCACCTTTCTGCAGTACAGCTTGCTTTACTCTTTTCTCCTCATGGAGAACATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052332.15 |
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| 3UTR-3UTR CCA 90 bp | GTTGGTATGCCTTTCATGATTGAGAAATGGTCACATTTTCAATCTAGACAGCATCTTCATTCATTTCACTaGGAGGAAATTCCCAGGGCC | + |
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Preference number: 2 (lower is better) Translates to: VGMPFMIEKWSHFQSRQHLHSFH*EEIPRA Trigger: GGCCCTGGGAATTTCCTCCCAGTGAAATGAATGAAG...ATGCTGTCTAGATTGAAAATGTGACCATTTCTCAATCATGAAAGGCATACCAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000052332.15 ENSMUST00000185788.7 ENSMUST00000189980.7 ENSMUST00000190158.2 |
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| 3UTR-3UTR CCA 90 bp | GAGAAATGGTCACATTTTCAATCTAGACAGCATAATGCAAATGACAGCAAGAAGCTTCATTCATTTCACTaGGAGGAAATTCCCAGGGCC | + |
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Preference number: 2 (lower is better) Translates to: EKWSHFQSRQHNANDSKKLHSFH*EEIPRA Trigger: GGCCCTGGGAATTTCCTCCCAGTGAAATGAATGAAG...CTTCTTGCTGTCATTTGCATTATGCTGTCTAGATTGAAAATGTGACCATTTCTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000052332.15 ENSMUST00000185788.7 ENSMUST00000187709.7 ENSMUST00000189980.7 ENSMUST00000190158.2 |
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| 3UTR-3UTR CCA 90 bp | CATGTTCTCCATGAGGAGAAAAGAGTAAAGCAAGCTGTACTGCAGAAAGGTGACCCACTTGTTCAGACTTaGCTTTCAGTTTTTGATACA | + |
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Preference number: 2 (lower is better) Translates to: HVLHEEKRVKQAVLQKGDPLVQT*LSVFDT Trigger: TGTATCAAAAACTGAAAGCCAAGTCTGAACAAGTGG...GTCACCTTTCTGCAGTACAGCTTGCTTTACTCTTTTCTCCTCATGGAGAACATG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052332.15 |
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| 3UTR-3UTR CCA 90 bp | AAACACTGGTTCCTTTCCTCTCCATATACTGAAAGTAAAGGGCAAGGGTGTCCACCACTTGTTCAGACTTaGCTTTCAGTTTTTGATACA | + |
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Preference number: 2 (lower is better) Translates to: KHWFLSSPYTESKGQGCPPLVQT*LSVFDT Trigger: TGTATCAAAAACTGAAAGCCAAGTCTGAACAAGTGG...TGGACACCCTTGCCCTTTACTTTCAGTATATGGAGAGGAAAGGAACCAGTGTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000052332.15 ENSMUST00000185788.7 ENSMUST00000189980.7 |
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| 3UTR-3UTR CCA 90 bp | TCACCTCAGTACATGAAGTACCTACACCACATTTCACATTGCTTTCACTGGCTGAACCCTGGGAATATTTaGAGACTTTCACATTTTGTC | + |
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Preference number: 2 (lower is better) Translates to: SPQYMKYLHHISHCFHWLNPGNI*RLSHFV Trigger: GACAAAATGTGAAAGTCTCCAAATATTCCCAGGGTT...CAGCCAGTGAAAGCAATGTGAAATGTGGTGTAGGTACTTCATGTACTGAGGTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052332.15 ENSMUST00000185788.7 ENSMUST00000189980.7 |
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| 3UTR CAA 90 bp | TTTCCATGTACCAATACAATCAGAGTTAAACGTTCATATACAGTCTaGCTTGGGTCCATAATGGAACTAAAGGTTCAGAGGACTTCAGGG | + |
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Preference number: 2 (lower is better) Translates to: FPCTNTIRVKRSYTV*LGSIMELKVQRTSG Trigger: CCCTGAAGTCCTCTGAACCTTTAGTTCCATTATGGACCCAAGCAAGACTGTATATGAACGTTTAACTCTGATTGTATTGGTACATGGAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052332.15 ENSMUST00000188618.7 ENSMUST00000189980.7 |
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| 3UTR-3UTR CCA 90 bp | CATGTTCTCCATGAGGAGAAAAGAGTAAAGCAAGCTGTACTGCAGAAAGGTGACATATACAGTCTTGCTTaGGTCCATAATGGAACTAAA | + |
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Preference number: 2 (lower is better) Translates to: HVLHEEKRVKQAVLQKGDIYSLA*VHNGTK Trigger: TTTAGTTCCATTATGGACCCAAGCAAGACTGTATAT...GTCACCTTTCTGCAGTACAGCTTGCTTTACTCTTTTCTCCTCATGGAGAACATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052332.15 ENSMUST00000188618.7 |
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| 3UTR-3UTR CCA 90 bp | GTGCTCCATTCTGTTCCTGCCAGCATAGAACTAAATACAATGCATTCTTGCTACAAAGTGGTTGCATTCTaGTCAGCAAAGTTTCAACAT | + |
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Preference number: 2 (lower is better) Translates to: VLHSVPASIELNTMHSCYKVVAF*SAKFQH Trigger: ATGTTGAAACTTTGCTGACCAGAATGCAACCACTTT...GTAGCAAGAATGCATTGTATTTAGTTCTATGCTGGCAGGAACAGAATGGAGCAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052332.15 ENSMUST00000188618.7 |
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| 3UTR-3UTR GCA 90 bp | TTTAGAAGGGGTGAATGCAGGTTGCACTTGAATTCCTTTAAGCAATCTGAATACAGGGTAAAGGAACTGTaGACAGAATCAGACATTTCA | + |
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Preference number: 2 (lower is better) Translates to: FRRGECRLHLNSFKQSEYRVKEL*TESDIS Trigger: TGAAATGTCTGATTCTGTGCACAGTTCCTTTACCCT...GTATTCAGATTGCTTAAAGGAATTCAAGTGCAACCTGCATTCACCCCTTCTAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052332.15 ENSMUST00000188618.7 |
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| 3UTR CAA 90 bp | TTTCAATCTAGACAGCATAATGCAAATGACAGCAAGAAGATCCACTaGTTCAGACTTGGCTTTCAGTTTTTGATACAAGGGGATAAACCA | + |
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Preference number: 2 (lower is better) Translates to: FQSRQHNANDSKKIH*FRLGFQFLIQGDKP Trigger: TGGTTTATCCCCTTGTATCAAAAACTGAAAGCCAAGTCTGAACAAGTGGATCTTCTTGCTGTCATTTGCATTATGCTGTCTAGATTGAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000052332.15 ENSMUST00000185788.7 ENSMUST00000187709.7 ENSMUST00000189980.7 ENSMUST00000190158.2 |
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| 3UTR-3UTR TCA 90 bp | GTTAAACGTTCATATACAGTCTTGCTTGGGTCCATAATGGAACTAAAGGTTCAGTTGGCTTTCAGTTTTTaGTACAAGGGGATAAACCAA | + |
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Preference number: 2 (lower is better) Translates to: VKRSYTVLLGSIMELKVQLAFSF*YKGINQ Trigger: TTGGTTTATCCCCTTGTATCAAAAACTGAAAGCCAA...CTGAACCTTTAGTTCCATTATGGACCCAAGCAAGACTGTATATGAACGTTTAAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000052332.15 ENSMUST00000189980.7 |
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| 3UTR-3UTR TCA 90 bp | AACACAGGGTTTACAGTGTTAAAGAAGGAAAACAGCCTTAAGCAATCAAAAAGCTTGGCTTTCAGTTTTTaGTACAAGGGGATAAACCAA | + |
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Preference number: 2 (lower is better) Translates to: NTGFTVLKKENSLKQSKSLAFSF*YKGINQ Trigger: TTGGTTTATCCCCTTGTATCAAAAACTGAAAGCCAA...GCTTTTTGATTGCTTAAGGCTGTTTTCCTTCTTTAACACTGTAAACCCTGTGTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 3 transcripts: ENSMUST00000052332.15 ENSMUST00000185788.7 ENSMUST00000189980.7 |
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| 3UTR-3UTR TCA 90 bp | GAGAAATGGTCACATTTTCAATCTAGACAGCATAATGCAAATGACAGCAAGAAGTTGGCTTTCAGTTTTTaGTACAAGGGGATAAACCAA | + |
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Preference number: 2 (lower is better) Translates to: EKWSHFQSRQHNANDSKKLAFSF*YKGINQ Trigger: TTGGTTTATCCCCTTGTATCAAAAACTGAAAGCCAA...CTTCTTGCTGTCATTTGCATTATGCTGTCTAGATTGAAAATGTGACCATTTCTC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000052332.15 ENSMUST00000185788.7 ENSMUST00000187709.7 ENSMUST00000189980.7 ENSMUST00000190158.2 |
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| 3UTR-3UTR TCA 90 bp | ATCAGAGTTAAACGTTCATATACAGTCTTGCTTGGGTCCATAATGGAACTAAAGTTGGTATGCCTTTCATaGTTGAGAAATGGTCACATT | + |
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Preference number: 2 (lower is better) Translates to: IRVKRSYTVLLGSIMELKLVCLS*LRNGHI Trigger: AATGTGACCATTTCTCAATCATGAAAGGCATACCAA...CTTTAGTTCCATTATGGACCCAAGCAAGACTGTATATGAACGTTTAACTCTGAT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052332.15 ENSMUST00000189980.7 |
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| 3UTR-3UTR CCA 90 bp | ATCAGAGTTAAACGTTCATATACAGTCTTGCTTGGGTCCATAATGGAACTAAAGCCACTTGTTCAGACTTaGCTTTCAGTTTTTGATACA | + |
|
Preference number: 2 (lower is better) Translates to: IRVKRSYTVLLGSIMELKPLVQT*LSVFDT Trigger: TGTATCAAAAACTGAAAGCCAAGTCTGAACAAGTGG...CTTTAGTTCCATTATGGACCCAAGCAAGACTGTATATGAACGTTTAACTCTGAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000052332.15 ENSMUST00000189980.7 |
||
| 3UTR-3UTR CCA 90 bp | GAAAGATCCCAGATATTTTTCCTCAAGTCAGTCTTGGTCTTACATGTTTTAGCTCCACTTGTTCAGACTTaGCTTTCAGTTTTTGATACA | + |
|
Preference number: 2 (lower is better) Translates to: ERSQIFFLKSVLVLHVLAPLVQT*LSVFDT Trigger: TGTATCAAAAACTGAAAGCCAAGTCTGAACAAGTGG...AGCTAAAACATGTAAGACCAAGACTGACTTGAGGAAAAATATCTGGGATCTTTC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000052332.15 ENSMUST00000185788.7 ENSMUST00000189980.7 ENSMUST00000190158.2 |
||
| 3UTR-3UTR CCA 90 bp | TTTAGAAGGGGTGAATGCAGGTTGCACTTGAATTCCTTTAAGCAATCTGAATACTTTCCTCAGTGTGACTaGGCAAGTATTTTATTCTAT | + |
|
Preference number: 2 (lower is better) Translates to: FRRGECRLHLNSFKQSEYFPQCD*ASILFY Trigger: ATAGAATAAAATACTTGCCCAGTCACACTGAGGAAA...GTATTCAGATTGCTTAAAGGAATTCAAGTGCAACCTGCATTCACCCCTTCTAAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000052332.15 ENSMUST00000188618.7 |
||
| 3UTR-3UTR CAA 90 bp | AAAAGTGTGAGCCGGGCGGTGGTGGCGCACGCCTTTAGTCCCAGCACTCGGCAGCAGCTAACACTGCCATaGATAATGGTCCAAGAGCAT | + |
|
Preference number: 3 (lower is better) Translates to: KSVSRAVVAHAFSPSTRQQLTLP*IMVQEH Trigger: ATGCTCTTGGACCATTATCAATGGCAGTGTTAGCTG...CTGCCGAGTGCTGGGACTAAAGGCGTGCGCCACCACCGCCCGGCTCACACTTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052332.15 ENSMUST00000189980.7 |
||
| 3UTR-3UTR CAA 90 bp | CACTCGGCAGGCAGAGGCAGGTGGATTTCTGAGTTTGAGGCCAGCCTGGTCTACTTCCTCAAGTCAGTCTaGGTCTTACATGTTTTAGCT | + |
|
Preference number: 3 (lower is better) Translates to: HSAGRGRWISEFEASLVYFLKSV*VLHVLA Trigger: AGCTAAAACATGTAAGACCAAGACTGACTTGAGGAA...GTAGACCAGGCTGGCCTCAAACTCAGAAATCCACCTGCCTCTGCCTGCCGAGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052332.15 ENSMUST00000189980.7 |
||
| 3UTR-3UTR CAA 90 bp | CATATACTGAAAGTAAAGGGCAAGGGTGTCCACCAGGCCATGAGGTTAGCCCCAAGCAAGAAGATCCACTaGTTCAGACTTGGCTTTCAG | + |
|
Preference number: 3 (lower is better) Translates to: HILKVKGKGVHQAMRLAPSKKIH*FRLGFQ Trigger: CTGAAAGCCAAGTCTGAACAAGTGGATCTTCTTGCT...TGGGGCTAACCTCATGGCCTGGTGGACACCCTTGCCCTTTACTTTCAGTATATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052332.15 ENSMUST00000185788.7 ENSMUST00000189980.7 |
||
| 3UTR TCA 72 bp | CAAGAGCATGGTAGCAGCCTTTCATTCCCAGTCCAGTaGCTGTCAAGAGACTTGACAACACTAGTCTCTGCT | + |
|
Preference number: 3 (lower is better) Translates to: QEHGSSLSFPVQ*LSRDLTTLVSA Trigger: AGCAGAGACTAGTGTTGTCAAGTCTCTTGACAGTCACTGGACTGGGAATGAAAGGCTGCTACCATGCTCTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052332.15 ENSMUST00000189980.7 |
||
| 3UTR TCA 72 bp | AATAGCAAACTCAGCAGTCCTGTGCTAATCCCTAGATaGGGACAAGTACCTCTCAGGAAGACAGAAGTAGCC | + |
|
Preference number: 3 (lower is better) Translates to: NSKLSSPVLIPR*GQVPLRKTEVA Trigger: GGCTACTTCTGTCTTCCTGAGAGGTACTTGTCCTCATCTAGGGATTAGCACAGGACTGCTGAGTTTGCTATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052332.15 ENSMUST00000188618.7 |
||
| 3UTR GCA 72 bp | GTTCTTCTAGCATCACCAGACAGCATGTACAAGGCCTaGATCTGGATTACAACAGCTTTACTTCCTCTTCGG | + |
|
Preference number: 3 (lower is better) Translates to: VLLASPDSMYKA*IWITTALLPLR Trigger: CCGAAGAGGAAGTAAAGCTGTTGTAATCCAGATGCAGGCCTTGTACATGCTGTCTGGTGATGCTAGAAGAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052332.15 ENSMUST00000188618.7 ENSMUST00000189980.7 |
||
| 3UTR-3UTR CAA 90 bp | CTTTCCTCTCCATATACTGAAAGTAAAGGGCAAGGGTGTCCACCAGGCCATGAGTTCCTCAAGTCAGTCTaGGTCTTACATGTTTTAGCT | + |
|
Preference number: 3 (lower is better) Translates to: LSSPYTESKGQGCPPGHEFLKSV*VLHVLA Trigger: AGCTAAAACATGTAAGACCAAGACTGACTTGAGGAA...CTCATGGCCTGGTGGACACCCTTGCCCTTTACTTTCAGTATATGGAGAGGAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052332.15 ENSMUST00000185788.7 ENSMUST00000189980.7 |
||
| 3UTR-3UTR CAA 90 bp | CCAGTGCAAGTCTTCAGCACAAAGGATTTCACAAGTGTTTTCTGCAAACCCCAAACACCACATTTCACATaGCTTTCACTGGCTGCTATC | + |
|
Preference number: 3 (lower is better) Translates to: PVQVFSTKDFTSVFCKPQTPHFT*LSLAAI Trigger: GATAGCAGCCAGTGAAAGCAATGTGAAATGTGGTGT...TTGGGGTTTGCAGAAAACACTTGTGAAATCCTTTGTGCTGAAGACTTGCACTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000052332.15 ENSMUST00000189980.7 |
||
| 3UTR-3UTR CAA 90 bp | GTGCTCCATTCTGTTCCTGCCAGCATAGAACTAAATACAATGCATTCTTGCTACTGTAGGCCTGGCTCATaGTTACAGAGTATCCTTCCA | + |
|
Preference number: 3 (lower is better) Translates to: VLHSVPASIELNTMHSCYCRPGS*LQSILP Trigger: TGGAAGGATACTCTGTAACAATGAGCCAGGCCTACA...GTAGCAAGAATGCATTGTATTTAGTTCTATGCTGGCAGGAACAGAATGGAGCAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052332.15 ENSMUST00000188618.7 |
||
| 3UTR TCA 72 bp | CAAACAAAACCTACAACCTTAAAGCAAAAGAGGTCTTaGGAAGAACACTGTCTGGGTCCGAGTTGCACAGTG | + |
|
Preference number: 3 (lower is better) Translates to: QTKPTTLKQKRS*EEHCLGPSCTV Trigger: CACTGTGCAACTCGGACCCAGACAGTGTTCTTCTCAAGACCTCTTTTGCTTTAAGGTTGTAGGTTTTGTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000052332.15 ENSMUST00000188618.7 ENSMUST00000189980.7 |
||
| 3UTR-3UTR CAA 90 bp | ATCCTTATAATCTACAAACAGGACAGGGTGCAAGGGAGTTCAAGGTTAACTCACAGCAAGAAGATCCACTaGTTCAGACTTGGCTTTCAG | + |
|
Preference number: 3 (lower is better) Translates to: ILIIYKQDRVQGSSRLTHSKKIH*FRLGFQ Trigger: CTGAAAGCCAAGTCTGAACAAGTGGATCTTCTTGCT...GTGAGTTAACCTTGAACTCCCTTGCACCCTGTCCTGTTTGTAGATTATAAGGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052332.15 ENSMUST00000185788.7 ENSMUST00000189980.7 |
||
| 3UTR CCA 72 bp | CAACTCAGCAGGAGTCCAGAAGATAAACTGTATTCCTaGTGCCTACCACCAGTTGTTTCTATGACTACAAAA | + |
|
Preference number: 3 (lower is better) Translates to: QLSRSPEDKLYS*CLPPVVSMTTK Trigger: TTTTGTAGTCATAGAAACAACTGGTGGTAGGCACCAGGAATACAGTTTATCTTCTGGACTCCTGCTGAGTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052332.15 ENSMUST00000188618.7 ENSMUST00000189980.7 |
||
| 3UTR-3UTR CAA 90 bp | GTCACAGATTCTGCAGGAAGAGAAATCCAAGGGTGTACAGTATTCCTGAGAAAGTTCCTCAAGTCAGTCTaGGTCTTACATGTTTTAGCT | + |
|
Preference number: 3 (lower is better) Translates to: VTDSAGREIQGCTVFLRKFLKSV*VLHVLA Trigger: AGCTAAAACATGTAAGACCAAGACTGACTTGAGGAA...CTTTCTCAGGAATACTGTACACCCTTGGATTTCTCTTCCTGCAGAATCTGTGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000052332.15 ENSMUST00000185788.7 ENSMUST00000189980.7 ENSMUST00000190158.2 |
||
| 3UTR-3UTR CAA 90 bp | CATGTTCTCCATGAGGAGAAAAGAGTAAAGCAAGCTGTACTGCAGAAAGGTGACCAGCAGGCTGAAATCTaGGGTCTAGATTTCAAAATA | + |
|
Preference number: 3 (lower is better) Translates to: HVLHEEKRVKQAVLQKGDQQAEI*GLDFKI Trigger: TATTTTGAAATCTAGACCCAAGATTTCAGCCTGCTG...GTCACCTTTCTGCAGTACAGCTTGCTTTACTCTTTTCTCCTCATGGAGAACATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000052332.15 ENSMUST00000188618.7 |
||
| 3UTR TCA 72 bp | AACTGTATTCCTGGTGCCTACCACCAGTTGTTTCTATaGCTACAAAAGCTAGTTGTTTGCTGGGTTTCCAAA | + |
|
Preference number: 3 (lower is better) Translates to: NCIPGAYHQLFL*LQKLVVCWVSK Trigger: TTTGGAAACCCAGCAAACAACTAGCTTTTGTAGTCATAGAAACAACTGGTGGTAGGCACCAGGAATACAGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052332.15 ENSMUST00000188618.7 ENSMUST00000189980.7 |
||
| 3UTR GCA 72 bp | ACTGGCTGCTATCAGCAATGCAGTCTCATGCAACAGTaGATTAAAATCAAACTGTTAACAACCCTGGGAATA | + |
|
Preference number: 3 (lower is better) Translates to: TGCYQQCSLMQQ*IKIKLLTTLGI Trigger: TATTCCCAGGGTTGTTAACAGTTTGATTTTAATGCACTGTTGCATGAGACTGCATTGCTGATAGCAGCCAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052332.15 ENSMUST00000185788.7 ENSMUST00000189980.7 |
||
| 3UTR-3UTR CAA 90 bp | GTTGTGCTCCATTCTGTTCCTGCCAGCATAGAACTAAATACAATGCATTCTTGCCTTGGCTTTCAGTTTTaGATACAAGGGGATAAACCA | + |
|
Preference number: 3 (lower is better) Translates to: VVLHSVPASIELNTMHSCLGFQF*IQGDKP Trigger: TGGTTTATCCCCTTGTATCAAAAACTGAAAGCCAAG...GCAAGAATGCATTGTATTTAGTTCTATGCTGGCAGGAACAGAATGGAGCACAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052332.15 |
||
| 3UTR-3UTR CAA 90 bp | CAAGTATTTTATTCTATTAGTCTTCTCCAGCACACTCTTCACTCTGAATCACAAGAGATTGAAAATGACTaGGCATCAGCTAACACTGCC | + |
|
Preference number: 3 (lower is better) Translates to: QVFYSISLLQHTLHSESQEIEND*ASANTA Trigger: GGCAGTGTTAGCTGATGCCAAGTCATTTTCAATCTC...TTGTGATTCAGAGTGAAGAGTGTGCTGGAGAAGACTAATAGAATAAAATACTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000052332.15 ENSMUST00000189980.7 |
||
| 3UTR CCA 72 bp | CCTCAGTACCTGTGTCTTGGTAAAGTGGTTGCATTCTaGTCAGCAAAGTTTCAACATTTGTTTAAAATTCCT | + |
|
Preference number: 3 (lower is better) Translates to: PQYLCLGKVVAF*SAKFQHLFKIP Trigger: AGGAATTTTAAACAAATGTTGAAACTTTGCTGACCAGAATGCAACCACTTTACCAAGACACAGGTACTGAGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052332.15 ENSMUST00000188618.7 ENSMUST00000189980.7 |
||
| 3UTR CCA 72 bp | TTCATAAGTAAACAGCTCCCATTCATTTCAAAGATTTaGAAGTCTACCAACCATTTCTTCCACCAAAGCCCT | + |
|
Preference number: 3 (lower is better) Translates to: FISKQLPFISKI*KSTNHFFHQSP Trigger: AGGGCTTTGGTGGAAGAAATGGTTGGTAGACTTCCAAATCTTTGAAATGAATGGGAGCTGTTTACTTATGAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052332.15 ENSMUST00000188618.7 |
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| 3UTR-3UTR CAA 90 bp | GTTGGTATGCCTTTCATGATTGAGAAATGGTCACATTTTCAATCTAGACAGCATCTTGGCTTTCAGTTTTaGATACAAGGGGATAAACCA | + |
|
Preference number: 3 (lower is better) Translates to: VGMPFMIEKWSHFQSRQHLGFQF*IQGDKP Trigger: TGGTTTATCCCCTTGTATCAAAAACTGAAAGCCAAG...ATGCTGTCTAGATTGAAAATGTGACCATTTCTCAATCATGAAAGGCATACCAAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000052332.15 ENSMUST00000185788.7 ENSMUST00000189980.7 ENSMUST00000190158.2 |
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| 3UTR-3UTR CAA 90 bp | AACACAGGGTTTACAGTGTTAAAGAAGGAAAACAGCCTTAAGCAATCAAAAAGCCTTGGCTTTCAGTTTTaGATACAAGGGGATAAACCA | + |
|
Preference number: 3 (lower is better) Translates to: NTGFTVLKKENSLKQSKSLGFQF*IQGDKP Trigger: TGGTTTATCCCCTTGTATCAAAAACTGAAAGCCAAG...GCTTTTTGATTGCTTAAGGCTGTTTTCCTTCTTTAACACTGTAAACCCTGTGTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000052332.15 ENSMUST00000185788.7 ENSMUST00000189980.7 |
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| 3UTR TCA 72 bp | TATTCTGAAGACAGTCAAGATGACCTAACAAATCCATaGAGTGGAACGTGTGCTAGAAGCAAGTTAAAGAAT | + |
|
Preference number: 3 (lower is better) Translates to: YSEDSQDDLTNP*SGTCARSKLKN Trigger: ATTCTTTAACTTGCTTCTAGCACACGTTCCACTTCATGGATTTGTTAGGTCATCTTGACTGTCTTCAGAATA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052332.15 ENSMUST00000188618.7 ENSMUST00000189980.7 |
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| 3UTR TCA 72 bp | TGTTTTAGCTACATGTTCATGTTGGTATGCCTTTCATaGTTGAGAAATGGTCACATTTTCAATCTAGACAGC | + |
|
Preference number: 3 (lower is better) Translates to: CFSYMFMLVCLS*LRNGHIFNLDS Trigger: GCTGTCTAGATTGAAAATGTGACCATTTCTCAATCATGAAAGGCATACCAACATGAACATGTAGCTAAAACA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000052332.15 ENSMUST00000185788.7 ENSMUST00000189980.7 ENSMUST00000190158.2 |
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| 3UTR GCA 72 bp | GTTCCTGCCAGCATAGAACTAAATACAATGCATTCTTaGTACACACAGCTTTATAGAAAGGTATTTATGAAT | + |
|
Preference number: 3 (lower is better) Translates to: VPASIELNTMHS*YTQLYRKVFMN Trigger: ATTCATAAATACCTTTCTATAAAGCTGTGTGTAGCAAGAATGCATTGTATTTAGTTCTATGCTGGCAGGAAC 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052332.15 ENSMUST00000188618.7 |
||
| CDS-3UTR TCA 90 bp | GTGAGCCGGGCGGTGGTGGCGCACGCCTTTAGTCCCAGCACTCGGCAGGCAGAGCTCCGACTACTTGGGTaGCTTCCTCCACTGCTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: VSRAVVAHAFSPSTRQAELRLLG*LPPLLP Trigger: TGGGAGCAGTGGAGGAAGTCACCCAAGTAGTCGGAG...CTCTGCCTGCCGAGTGCTGGGACTAAAGGCGTGCGCCACCACCGCCCGGCTCAC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052332.15 ENSMUST00000188618.7 ENSMUST00000189980.7 |
||
| CDS-3UTR GCA 90 bp | GTGAGCCGGGCGGTGGTGGCGCACGCCTTTAGTCCCAGCACTCGGCAGGCAGAGCGCTGTTCTCCCGACTaGTGCTCCGACTACTTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: VSRAVVAHAFSPSTRQAERCSPD*CSDYLG Trigger: ACCCAAGTAGTCGGAGCAGCAGTCGGGAGAACAGCG...CTCTGCCTGCCGAGTGCTGGGACTAAAGGCGTGCGCCACCACCGCCCGGCTCAC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052332.15 ENSMUST00000188618.7 ENSMUST00000189980.7 |
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| CDS-3UTR CCA 90 bp | GTGAGCCGGGCGGTGGTGGCGCACGCCTTTAGTCCCAGCACTCGGCAGGCAGAGCTCTTCATAATCTTCTaGAGGAGGCGGTGGAGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: VSRAVVAHAFSPSTRQAELFIIF*RRRWRG Trigger: CCCCCTCCACCGCCTCCTCCAGAAGATTATGAAGAG...CTCTGCCTGCCGAGTGCTGGGACTAAAGGCGTGCGCCACCACCGCCCGGCTCAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052332.15 ENSMUST00000188618.7 ENSMUST00000189980.7 |
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| CDS-3UTR CCA 90 bp | AAAAGTGTGAGCCGGGCGGTGGTGGCGCACGCCTTTAGTCCCAGCACTCGGCAGCACTGGAGGACGCACTaGCTCCAGTGTTCGATAGGG | + |
|
Preference number: 4 (lower is better) Translates to: KSVSRAVVAHAFSPSTRQHWRTH*LQCSIG Trigger: CCCTATCGAACACTGGAGCCAGTGCGTCCTCCAGTG...CTGCCGAGTGCTGGGACTAAAGGCGTGCGCCACCACCGCCCGGCTCACACTTTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052332.15 ENSMUST00000188618.7 ENSMUST00000189980.7 |
||
| CDS-3UTR CCA 90 bp | AAAAGTGTGAGCCGGGCGGTGGTGGCGCACGCCTTTAGTCCCAGCACTCGGCAGATCATTTGGTACCACTaGAGGACGCACTGGCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: KSVSRAVVAHAFSPSTRQIIWYH*RTHWLQ Trigger: CTGGAGCCAGTGCGTCCTCCAGTGGTACCAAATGAT...CTGCCGAGTGCTGGGACTAAAGGCGTGCGCCACCACCGCCCGGCTCACACTTTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052332.15 ENSMUST00000188618.7 ENSMUST00000189980.7 |
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| CDS-3UTR CCA 90 bp | GGGAGGAAATTCCCAGGGCCTCAAGCTAATCTGGGAAGACCTGACCTCCTGAGACCTTGGCGCCCACGGTaGGTCCTCTTCAGCGTACGG | + |
|
Preference number: 4 (lower is better) Translates to: GRKFPGPQANLGRPDLLRPWRPR*VLFSVR Trigger: CCGTACGCTGAAGAGGACCCACCGTGGGCGCCAAGG...TCTCAGGAGGTCAGGTCTTCCCAGATTAGCTTGAGGCCCTGGGAATTTCCTCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000052332.15 ENSMUST00000185788.7 ENSMUST00000186097.7 ENSMUST00000187709.7 ENSMUST00000188594.7 ENSMUST00000189980.7 ENSMUST00000190158.2 |
||
| CDS-3UTR TCA 90 bp | GGGAGGAAATTCCCAGGGCCTCAAGCTAATCTGGGAAGACCTGACCTCCTGAGAAAGTGTCCCCTTCCCTaGCATAGGGGGACTTGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: GRKFPGPQANLGRPDLLRKCPLP*HRGTWG Trigger: CCCCCAAGTCCCCCTATGTCAGGGAAGGGGACACTT...TCTCAGGAGGTCAGGTCTTCCCAGATTAGCTTGAGGCCCTGGGAATTTCCTCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENSMUST00000052332.15 ENSMUST00000185788.7 ENSMUST00000186097.7 ENSMUST00000187709.7 ENSMUST00000188594.7 ENSMUST00000189980.7 ENSMUST00000190158.2 |
||
| CDS-3UTR CCA 90 bp | CACTCGGCAGGCAGAGGCAGGTGGATTTCTGAGTTTGAGGCCAGCCTGGTCTACCTCTTCATAATCTTCTaGAGGAGGCGGTGGAGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: HSAGRGRWISEFEASLVYLFIIF*RRRWRG Trigger: CCCCCTCCACCGCCTCCTCCAGAAGATTATGAAGAG...GTAGACCAGGCTGGCCTCAAACTCAGAAATCCACCTGCCTCTGCCTGCCGAGTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052332.15 ENSMUST00000188618.7 ENSMUST00000189980.7 |
||
| CDS-3UTR CCA 90 bp | GGGAGGAAATTCCCAGGGCCTCAAGCTAATCTGGGAAGACCTGACCTCCTGAGATTCCAAGTAAGCCCTTaGCGCCCACGGTGGGTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: GRKFPGPQANLGRPDLLRFQVSP*RPRWVL Trigger: GAGGACCCACCGTGGGCGCCAAGGGCTTACTTGGAA...TCTCAGGAGGTCAGGTCTTCCCAGATTAGCTTGAGGCCCTGGGAATTTCCTCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000052332.15 ENSMUST00000185788.7 ENSMUST00000186097.7 ENSMUST00000187709.7 ENSMUST00000188594.7 ENSMUST00000189980.7 ENSMUST00000190158.2 |
||
| CDS-3UTR TCA 90 bp | GGGAGGAAATTCCCAGGGCCTCAAGCTAATCTGGGAAGACCTGACCTCCTGAGAGGACTTGGGGGCTTCTaGGTTGGAGGTGTCGTACGT | + |
|
Preference number: 4 (lower is better) Translates to: GRKFPGPQANLGRPDLLRGLGGF*VGGVVR Trigger: ACGTACGACACCTCCAACTCAGAAGCCCCCAAGTCC...TCTCAGGAGGTCAGGTCTTCCCAGATTAGCTTGAGGCCCTGGGAATTTCCTCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENSMUST00000052332.15 ENSMUST00000185788.7 ENSMUST00000186097.7 ENSMUST00000187709.7 ENSMUST00000188594.7 ENSMUST00000189980.7 ENSMUST00000190158.2 |
||
| CDS-3UTR GCA 90 bp | TCTTCCACCAAAGCCCTTTGCAGGCGTAAAGGCGGCCTTCGGGAGACACCATGTTGTTCTCCCGACTGCTaGTCCGACTACTTGGGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: SSTKALCRRKGGLRETPCCSPDC*SDYLGD Trigger: GTCACCCAAGTAGTCGGAGCAGCAGTCGGGAGAACA...ACATGGTGTCTCCCGAAGGCCGCCTTTACGCCTGCAAAGGGCTTTGGTGGAAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052332.15 ENSMUST00000188618.7 |
||
| CDS-3UTR GCA 90 bp | CTTCCACCAAAGCCCTTTGCAGGCGTAAAGGCGGCCTTCGGGAGACACCATGTTTGTTCTCCCGACTGCTaGTCCGACTACTTGGGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: LPPKPFAGVKAAFGRHHVCSPDC*SDYLGD Trigger: GTCACCCAAGTAGTCGGAGCAGCAGTCGGGAGAACA...AACATGGTGTCTCCCGAAGGCCGCCTTTACGCCTGCAAAGGGCTTTGGTGGAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052332.15 ENSMUST00000188618.7 |
||
| CDS-3UTR GCA 90 bp | GGGAGGAAATTCCCAGGGCCTCAAGCTAATCTGGGAAGACCTGACCTCCTGAGACGCTGTTCTCCCGACTaGTGCTCCGACTACTTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: GRKFPGPQANLGRPDLLRRCSPD*CSDYLG Trigger: ACCCAAGTAGTCGGAGCAGCAGTCGGGAGAACAGCG...TCTCAGGAGGTCAGGTCTTCCCAGATTAGCTTGAGGCCCTGGGAATTTCCTCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000052332.15 ENSMUST00000185788.7 ENSMUST00000186097.7 ENSMUST00000187709.7 ENSMUST00000188594.7 ENSMUST00000189980.7 ENSMUST00000190158.2 |
||
| CDS-3UTR GCA 90 bp | TATACTGAAAGTAAAGGGCAAGGGTGTCCACCAGGCCATGAGGTTAGCCCCAAACAGGAAGGGGAGGAGTaGCAGCAGAGCCAGCAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: YTESKGQGCPPGHEVSPKQEGEE*QQSQQG Trigger: CCCCTGCTGGCTCTGCTGGCACTCCTCCCCTTCCTG...TTTGGGGCTAACCTCATGGCCTGGTGGACACCCTTGCCCTTTACTTTCAGTATA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000185788.7 |
||
| CDS-3UTR GCA 90 bp | GGGAGGAAATTCCCAGGGCCTCAAGCTAATCTGGGAAGACCTGACCTCCTGAGAGGTGACTTCCTCCACTaGTCCCACTGCTGCCAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: GRKFPGPQANLGRPDLLRGDFLH*SHCCQV Trigger: CACTTGGCAGCAGTGGGAGCAGTGGAGGAAGTCACC...TCTCAGGAGGTCAGGTCTTCCCAGATTAGCTTGAGGCCCTGGGAATTTCCTCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000185788.7 ENSMUST00000188594.7 ENSMUST00000190158.2 |
||
| CDS-3UTR CCA 90 bp | TCTTCCACCAAAGCCCTTTGCAGGCGTAAAGGCGGCCTTCGGGAGACACCATGTTGGGGGCTTCTGAGTTaGAGGTGTCGTACGTGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: SSTKALCRRKGGLRETPCWGLLS*RCRTWQ Trigger: TTGCCACGTACGACACCTCCAACTCAGAAGCCCCCA...ACATGGTGTCTCCCGAAGGCCGCCTTTACGCCTGCAAAGGGCTTTGGTGGAAGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000052332.15 ENSMUST00000188618.7 |
||
| CDS-3UTR CCA 90 bp | GGGAGGAAATTCCCAGGGCCTCAAGCTAATCTGGGAAGACCTGACCTCCTGAGATGGGGGCTTCTGAGTTaGAGGTGTCGTACGTGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: GRKFPGPQANLGRPDLLRWGLLS*RCRTWQ Trigger: TTGCCACGTACGACACCTCCAACTCAGAAGCCCCCA...TCTCAGGAGGTCAGGTCTTCCCAGATTAGCTTGAGGCCCTGGGAATTTCCTCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENSMUST00000052332.15 ENSMUST00000185788.7 ENSMUST00000186097.7 ENSMUST00000187709.7 ENSMUST00000188594.7 ENSMUST00000189980.7 ENSMUST00000190158.2 |
||
| CDS-3UTR CCA 90 bp | TGCTTCATTCATTTCACTGGGAGGAAATTCCCAGGGCCTCAAGCTAATCTGGGACCTTGGCGCCCACGGTaGGTCCTCTTCAGCGTACGG | + |
|
Preference number: 4 (lower is better) Translates to: CFIHFTGRKFPGPQANLGPWRPR*VLFSVR Trigger: CCGTACGCTGAAGAGGACCCACCGTGGGCGCCAAGG...TCCCAGATTAGCTTGAGGCCCTGGGAATTTCCTCCCAGTGAAATGAATGAAGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000052332.15 ENSMUST00000185788.7 ENSMUST00000186097.7 ENSMUST00000187709.7 ENSMUST00000188594.7 ENSMUST00000189980.7 ENSMUST00000190158.2 |
||
| CDS-3UTR TCA 90 bp | CTTTCCTCTCCATATACTGAAAGTAAAGGGCAAGGGTGTCCACCAGGCCATGAGAAGTGTCCCCTTCCCTaGCATAGGGGGACTTGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: LSSPYTESKGQGCPPGHEKCPLP*HRGTWG Trigger: CCCCCAAGTCCCCCTATGTCAGGGAAGGGGACACTT...CTCATGGCCTGGTGGACACCCTTGCCCTTTACTTTCAGTATATGGAGAGGAAAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000052332.15 ENSMUST00000185788.7 ENSMUST00000189980.7 |
||
| CDS-3UTR GCA 90 bp | CATATACTGAAAGTAAAGGGCAAGGGTGTCCACCAGGCCATGAGGTTAGCCCCACGCTGTTCTCCCGACTaGTGCTCCGACTACTTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: HILKVKGKGVHQAMRLAPRCSPD*CSDYLG Trigger: ACCCAAGTAGTCGGAGCAGCAGTCGGGAGAACAGCG...TGGGGCTAACCTCATGGCCTGGTGGACACCCTTGCCCTTTACTTTCAGTATATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052332.15 ENSMUST00000185788.7 ENSMUST00000189980.7 |
||
| CDS-3UTR GCA 90 bp | TTCATTTCACTGGGAGGAAATTCCCAGGGCCTCAAGCTAATCTGGGAAGACCTGCACTGCTCCCACTGCTaGCAAGTGTCCCCTTCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: FISLGGNSQGLKLIWEDLHCSHC*QVSPSL Trigger: CAGGGAAGGGGACACTTGGCAGCAGTGGGAGCAGTG...CAGGTCTTCCCAGATTAGCTTGAGGCCCTGGGAATTTCCTCCCAGTGAAATGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000185788.7 ENSMUST00000188594.7 ENSMUST00000190158.2 |
||
| CDS-3UTR TCA 90 bp | CTTTCCTCTCCATATACTGAAAGTAAAGGGCAAGGGTGTCCACCAGGCCATGAGGGACTTGGGGGCTTCTaGGTTGGAGGTGTCGTACGT | + |
|
Preference number: 4 (lower is better) Translates to: LSSPYTESKGQGCPPGHEGLGGF*VGGVVR Trigger: ACGTACGACACCTCCAACTCAGAAGCCCCCAAGTCC...CTCATGGCCTGGTGGACACCCTTGCCCTTTACTTTCAGTATATGGAGAGGAAAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000052332.15 ENSMUST00000185788.7 ENSMUST00000189980.7 |
||
| CDS-3UTR TCA 90 bp | TGCTTCATTCATTTCACTGGGAGGAAATTCCCAGGGCCTCAAGCTAATCTGGGAAAGTGTCCCCTTCCCTaGCATAGGGGGACTTGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: CFIHFTGRKFPGPQANLGKCPLP*HRGTWG Trigger: CCCCCAAGTCCCCCTATGTCAGGGAAGGGGACACTT...TCCCAGATTAGCTTGAGGCCCTGGGAATTTCCTCCCAGTGAAATGAATGAAGCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENSMUST00000052332.15 ENSMUST00000185788.7 ENSMUST00000186097.7 ENSMUST00000187709.7 ENSMUST00000188594.7 ENSMUST00000189980.7 ENSMUST00000190158.2 |
||
| CDS-3UTR TCA 90 bp | TTCATTTCACTGGGAGGAAATTCCCAGGGCCTCAAGCTAATCTGGGAAGACCTGCTCCGACTACTTGGGTaGCTTCCTCCACTGCTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: FISLGGNSQGLKLIWEDLLRLLG*LPPLLP Trigger: TGGGAGCAGTGGAGGAAGTCACCCAAGTAGTCGGAG...CAGGTCTTCCCAGATTAGCTTGAGGCCCTGGGAATTTCCTCCCAGTGAAATGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000052332.15 ENSMUST00000185788.7 ENSMUST00000186097.7 ENSMUST00000187709.7 ENSMUST00000188594.7 ENSMUST00000189980.7 ENSMUST00000190158.2 |
||
| CDS-3UTR TCA 90 bp | GGGAGGAAATTCCCAGGGCCTCAAGCTAATCTGGGAAGACCTGACCTCCTGAGACTGAAGGCTTGTTTGTaGCGTTATGGAAGGAGGACG | + |
|
Preference number: 4 (lower is better) Translates to: GRKFPGPQANLGRPDLLRLKACL*RYGRRT Trigger: CGTCCTCCTTCCATAACGTCACAAACAAGCCTTCAG...TCTCAGGAGGTCAGGTCTTCCCAGATTAGCTTGAGGCCCTGGGAATTTCCTCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000052332.15 ENSMUST00000185788.7 ENSMUST00000186097.7 ENSMUST00000187709.7 ENSMUST00000188594.7 ENSMUST00000189980.7 ENSMUST00000190158.2 |
||
| CDS-3UTR GCA 90 bp | TTCATTTCACTGGGAGGAAATTCCCAGGGCCTCAAGCTAATCTGGGAAGACCTGCTCACAGGGCTCTGCTaGGAGGGAGCCATATTACGG | + |
|
Preference number: 4 (lower is better) Translates to: FISLGGNSQGLKLIWEDLLTGLC*EGAILR Trigger: CCGTAATATGGCTCCCTCGCAGCAGAGCCCTGTGAG...CAGGTCTTCCCAGATTAGCTTGAGGCCCTGGGAATTTCCTCCCAGTGAAATGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000052332.15 ENSMUST00000186097.7 ENSMUST00000187709.7 ENSMUST00000189980.7 |
||
| CDS-3UTR GCA 90 bp | TTCATTTCACTGGGAGGAAATTCCCAGGGCCTCAAGCTAATCTGGGAAGACCTGCGCTGTTCTCCCGACTaGTGCTCCGACTACTTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: FISLGGNSQGLKLIWEDLRCSPD*CSDYLG Trigger: ACCCAAGTAGTCGGAGCAGCAGTCGGGAGAACAGCG...CAGGTCTTCCCAGATTAGCTTGAGGCCCTGGGAATTTCCTCCCAGTGAAATGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000052332.15 ENSMUST00000185788.7 ENSMUST00000186097.7 ENSMUST00000187709.7 ENSMUST00000188594.7 ENSMUST00000189980.7 ENSMUST00000190158.2 |
||
| CDS-3UTR GCA 90 bp | TTGTATGCTTCATTCATTTCACTGGGAGGAAATTCCCAGGGCCTCAAGCTAATCCAGGAAGGGGAGGAGTaGCAGCAGAGCCAGCAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: LYASFISLGGNSQGLKLIQEGEE*QQSQQG Trigger: CCCCTGCTGGCTCTGCTGGCACTCCTCCCCTTCCTG...GATTAGCTTGAGGCCCTGGGAATTTCCTCCCAGTGAAATGAATGAAGCATACAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000185788.7 ENSMUST00000186097.7 ENSMUST00000188594.7 ENSMUST00000190158.2 |
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| CDS-3UTR GCA 90 bp | CATGTTCTCCATGAGGAGAAAAGAGTAAAGCAAGCTGTACTGCAGAAAGGTGACCAGGAAGGGGAGGAGTaGCAGCAGAGCCAGCAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: HVLHEEKRVKQAVLQKGDQEGEE*QQSQQG Trigger: CCCCTGCTGGCTCTGCTGGCACTCCTCCCCTTCCTG...GTCACCTTTCTGCAGTACAGCTTGCTTTACTCTTTTCTCCTCATGGAGAACATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000188618.7 |
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| CDS-3UTR GCA 90 bp | TTCATTTCACTGGGAGGAAATTCCCAGGGCCTCAAGCTAATCTGGGAAGACCTGAGGGGTGGGGACAGATaGAGAAGTAGCAGGAAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: FISLGGNSQGLKLIWEDLRGGDR*RSSRKG Trigger: CCCCTTCCTGCTACTTCTGCATCTGTCCCCACCCCT...CAGGTCTTCCCAGATTAGCTTGAGGCCCTGGGAATTTCCTCCCAGTGAAATGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000185788.7 ENSMUST00000186097.7 ENSMUST00000188594.7 ENSMUST00000190158.2 |
||
| CDS-3UTR CCA 90 bp | TTCATTTCACTGGGAGGAAATTCCCAGGGCCTCAAGCTAATCTGGGAAGACCTGCACTGGAGGACGCACTaGCTCCAGTGTTCGATAGGG | + |
|
Preference number: 4 (lower is better) Translates to: FISLGGNSQGLKLIWEDLHWRTH*LQCSIG Trigger: CCCTATCGAACACTGGAGCCAGTGCGTCCTCCAGTG...CAGGTCTTCCCAGATTAGCTTGAGGCCCTGGGAATTTCCTCCCAGTGAAATGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000052332.15 ENSMUST00000186097.7 ENSMUST00000187709.7 ENSMUST00000189980.7 |
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| CDS-3UTR CCA 90 bp | CCAGTGCAAGTCTTCAGCACAAAGGATTTCACAAGTGTTTTCTGCAAACCCCAACCTTGGCGCCCACGGTaGGTCCTCTTCAGCGTACGG | + |
|
Preference number: 4 (lower is better) Translates to: PVQVFSTKDFTSVFCKPQPWRPR*VLFSVR Trigger: CCGTACGCTGAAGAGGACCCACCGTGGGCGCCAAGG...TTGGGGTTTGCAGAAAACACTTGTGAAATCCTTTGTGCTGAAGACTTGCACTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000052332.15 ENSMUST00000188618.7 ENSMUST00000189980.7 |
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| CDS-3UTR CCA 90 bp | TGCTTCATTCATTTCACTGGGAGGAAATTCCCAGGGCCTCAAGCTAATCTGGGATTCCAAGTAAGCCCTTaGCGCCCACGGTGGGTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: CFIHFTGRKFPGPQANLGFQVSP*RPRWVL Trigger: GAGGACCCACCGTGGGCGCCAAGGGCTTACTTGGAA...TCCCAGATTAGCTTGAGGCCCTGGGAATTTCCTCCCAGTGAAATGAATGAAGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000052332.15 ENSMUST00000185788.7 ENSMUST00000186097.7 ENSMUST00000187709.7 ENSMUST00000188594.7 ENSMUST00000189980.7 ENSMUST00000190158.2 |
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| CDS-3UTR GCA 90 bp | TATACTGAAAGTAAAGGGCAAGGGTGTCCACCAGGCCATGAGGTTAGCCCCAAAGTCCTCACAGGGCTCTaGTGCGAGGGAGCCATATTA | + |
|
Preference number: 4 (lower is better) Translates to: YTESKGQGCPPGHEVSPKVLTGL*CEGAIL Trigger: TAATATGGCTCCCTCGCAGCAGAGCCCTGTGAGGAC...TTTGGGGCTAACCTCATGGCCTGGTGGACACCCTTGCCCTTTACTTTCAGTATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052332.15 ENSMUST00000189980.7 |
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| CDS-3UTR GCA 90 bp | TTCATTTCACTGGGAGGAAATTCCCAGGGCCTCAAGCTAATCTGGGAAGACCTGTGTTCTCCCGACTGCTaGTCCGACTACTTGGGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: FISLGGNSQGLKLIWEDLCSPDC*SDYLGD Trigger: GTCACCCAAGTAGTCGGAGCAGCAGTCGGGAGAACA...CAGGTCTTCCCAGATTAGCTTGAGGCCCTGGGAATTTCCTCCCAGTGAAATGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000052332.15 ENSMUST00000185788.7 ENSMUST00000186097.7 ENSMUST00000187709.7 ENSMUST00000188594.7 ENSMUST00000189980.7 ENSMUST00000190158.2 |
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| CDS-3UTR GCA 90 bp | TGCTTCATTCATTTCACTGGGAGGAAATTCCCAGGGCCTCAAGCTAATCTGGGACGCTGTTCTCCCGACTaGTGCTCCGACTACTTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: CFIHFTGRKFPGPQANLGRCSPD*CSDYLG Trigger: ACCCAAGTAGTCGGAGCAGCAGTCGGGAGAACAGCG...TCCCAGATTAGCTTGAGGCCCTGGGAATTTCCTCCCAGTGAAATGAATGAAGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000052332.15 ENSMUST00000185788.7 ENSMUST00000186097.7 ENSMUST00000187709.7 ENSMUST00000188594.7 ENSMUST00000189980.7 ENSMUST00000190158.2 |
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| CDS-3UTR CCA 90 bp | TGCTTCATTCATTTCACTGGGAGGAAATTCCCAGGGCCTCAAGCTAATCTGGGACACTGGAGGACGCACTaGCTCCAGTGTTCGATAGGG | + |
|
Preference number: 4 (lower is better) Translates to: CFIHFTGRKFPGPQANLGHWRTH*LQCSIG Trigger: CCCTATCGAACACTGGAGCCAGTGCGTCCTCCAGTG...TCCCAGATTAGCTTGAGGCCCTGGGAATTTCCTCCCAGTGAAATGAATGAAGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000052332.15 ENSMUST00000186097.7 ENSMUST00000187709.7 ENSMUST00000189980.7 |
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| CDS-3UTR CCA 90 bp | TGCTTCATTCATTTCACTGGGAGGAAATTCCCAGGGCCTCAAGCTAATCTGGGAGCCCCCTATTGTAGGTaGTGTATGGCGAGAGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: CFIHFTGRKFPGPQANLGAPYCR*CMARGR Trigger: CCTGCCTCTCGCCATACACCACCTACAATAGGGGGC...TCCCAGATTAGCTTGAGGCCCTGGGAATTTCCTCCCAGTGAAATGAATGAAGCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENSMUST00000052332.15 ENSMUST00000185788.7 ENSMUST00000186097.7 ENSMUST00000187709.7 ENSMUST00000188594.7 ENSMUST00000189980.7 ENSMUST00000190158.2 |
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| CDS-3UTR CCA 90 bp | TTCATTTCACTGGGAGGAAATTCCCAGGGCCTCAAGCTAATCTGGGAAGACCTGCTCTTCATAATCTTCTaGAGGAGGCGGTGGAGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: FISLGGNSQGLKLIWEDLLFIIF*RRRWRG Trigger: CCCCCTCCACCGCCTCCTCCAGAAGATTATGAAGAG...CAGGTCTTCCCAGATTAGCTTGAGGCCCTGGGAATTTCCTCCCAGTGAAATGAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000052332.15 ENSMUST00000185788.7 ENSMUST00000186097.7 ENSMUST00000187709.7 ENSMUST00000188594.7 ENSMUST00000189980.7 ENSMUST00000190158.2 |
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| CDS-3UTR CCA 90 bp | ATCCTTATAATCTACAAACAGGACAGGGTGCAAGGGAGTTCAAGGTTAACTCACCCTTGGCGCCCACGGTaGGTCCTCTTCAGCGTACGG | + |
|
Preference number: 4 (lower is better) Translates to: ILIIYKQDRVQGSSRLTHPWRPR*VLFSVR Trigger: CCGTACGCTGAAGAGGACCCACCGTGGGCGCCAAGG...GTGAGTTAACCTTGAACTCCCTTGCACCCTGTCCTGTTTGTAGATTATAAGGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052332.15 ENSMUST00000185788.7 ENSMUST00000189980.7 |
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| CDS-3UTR TCA 90 bp | TTGTATGCTTCATTCATTTCACTGGGAGGAAATTCCCAGGGCCTCAAGCTAATCAAGTGTCCCCTTCCCTaGCATAGGGGGACTTGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: LYASFISLGGNSQGLKLIKCPLP*HRGTWG Trigger: CCCCCAAGTCCCCCTATGTCAGGGAAGGGGACACTT...GATTAGCTTGAGGCCCTGGGAATTTCCTCCCAGTGAAATGAATGAAGCATACAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENSMUST00000052332.15 ENSMUST00000185788.7 ENSMUST00000186097.7 ENSMUST00000187709.7 ENSMUST00000188594.7 ENSMUST00000189980.7 ENSMUST00000190158.2 |
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| CDS-3UTR TCA 90 bp | TACCCCCAGTGCAAGTCTTCAGCACAAAGGATTTCACAAGTGTTTTCTGCAAACAAGTGTCCCCTTCCCTaGCATAGGGGGACTTGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: YPQCKSSAQRISQVFSANKCPLP*HRGTWG Trigger: CCCCCAAGTCCCCCTATGTCAGGGAAGGGGACACTT...GTTTGCAGAAAACACTTGTGAAATCCTTTGTGCTGAAGACTTGCACTGGGGGTA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 3 transcripts: ENSMUST00000052332.15 ENSMUST00000188618.7 ENSMUST00000189980.7 |
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| CDS-3UTR GCA 90 bp | TGCTTCATTCATTTCACTGGGAGGAAATTCCCAGGGCCTCAAGCTAATCTGGGAGTCCTCACAGGGCTCTaGTGCGAGGGAGCCATATTA | + |
|
Preference number: 4 (lower is better) Translates to: CFIHFTGRKFPGPQANLGVLTGL*CEGAIL Trigger: TAATATGGCTCCCTCGCAGCAGAGCCCTGTGAGGAC...TCCCAGATTAGCTTGAGGCCCTGGGAATTTCCTCCCAGTGAAATGAATGAAGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000052332.15 ENSMUST00000186097.7 ENSMUST00000187709.7 ENSMUST00000189980.7 |
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| CDS-3UTR GCA 90 bp | TGCTTCATTCATTTCACTGGGAGGAAATTCCCAGGGCCTCAAGCTAATCTGGGATGTTCTCCCGACTGCTaGTCCGACTACTTGGGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: CFIHFTGRKFPGPQANLGCSPDC*SDYLGD Trigger: GTCACCCAAGTAGTCGGAGCAGCAGTCGGGAGAACA...TCCCAGATTAGCTTGAGGCCCTGGGAATTTCCTCCCAGTGAAATGAATGAAGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000052332.15 ENSMUST00000185788.7 ENSMUST00000186097.7 ENSMUST00000187709.7 ENSMUST00000188594.7 ENSMUST00000189980.7 ENSMUST00000190158.2 |
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| CDS-3UTR CCA 90 bp | TCTTCCACCAAAGCCCTTTGCAGGCGTAAAGGCGGCCTTCGGGAGACACCATGTCCCATTTTCATATTCTaGGTACTCACCTTCACTCCA | + |
|
Preference number: 4 (lower is better) Translates to: SSTKALCRRKGGLRETPCPIFIF*VLTFTP Trigger: TGGAGTGAAGGTGAGTACCCAGAATATGAAAATGGG...ACATGGTGTCTCCCGAAGGCCGCCTTTACGCCTGCAAAGGGCTTTGGTGGAAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052332.15 |
||
| CDS-3UTR CCA 90 bp | TGCTTCATTCATTTCACTGGGAGGAAATTCCCAGGGCCTCAAGCTAATCTGGGATGGGGGCTTCTGAGTTaGAGGTGTCGTACGTGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: CFIHFTGRKFPGPQANLGWGLLS*RCRTWQ Trigger: TTGCCACGTACGACACCTCCAACTCAGAAGCCCCCA...TCCCAGATTAGCTTGAGGCCCTGGGAATTTCCTCCCAGTGAAATGAATGAAGCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENSMUST00000052332.15 ENSMUST00000185788.7 ENSMUST00000186097.7 ENSMUST00000187709.7 ENSMUST00000188594.7 ENSMUST00000189980.7 ENSMUST00000190158.2 |
||
| CDS-3UTR CCA 90 bp | TTCATTTCACTGGGAGGAAATTCCCAGGGCCTCAAGCTAATCTGGGAAGACCTGGGATTCATCAAAGACTaGCTCTTCCACAGGTGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: FISLGGNSQGLKLIWEDLGFIKD*LFHRWG Trigger: CCCCCACCTGTGGAAGAGCCAGTCTTTGATGAATCC...CAGGTCTTCCCAGATTAGCTTGAGGCCCTGGGAATTTCCTCCCAGTGAAATGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000052332.15 ENSMUST00000185788.7 ENSMUST00000186097.7 ENSMUST00000187709.7 ENSMUST00000188594.7 ENSMUST00000189980.7 ENSMUST00000190158.2 |
||
| CDS-3UTR CCA 90 bp | CATGTTCTCCATGAGGAGAAAAGAGTAAAGCAAGCTGTACTGCAGAAAGGTGACTTCCAAGTAAGCCCTTaGCGCCCACGGTGGGTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: HVLHEEKRVKQAVLQKGDFQVSP*RPRWVL Trigger: GAGGACCCACCGTGGGCGCCAAGGGCTTACTTGGAA...GTCACCTTTCTGCAGTACAGCTTGCTTTACTCTTTTCTCCTCATGGAGAACATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052332.15 ENSMUST00000188618.7 |
||
| CDS-3UTR CCA 90 bp | TTGTATGCTTCATTCATTTCACTGGGAGGAAATTCCCAGGGCCTCAAGCTAATCTTCCAAGTAAGCCCTTaGCGCCCACGGTGGGTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: LYASFISLGGNSQGLKLIFQVSP*RPRWVL Trigger: GAGGACCCACCGTGGGCGCCAAGGGCTTACTTGGAA...GATTAGCTTGAGGCCCTGGGAATTTCCTCCCAGTGAAATGAATGAAGCATACAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000052332.15 ENSMUST00000185788.7 ENSMUST00000186097.7 ENSMUST00000187709.7 ENSMUST00000188594.7 ENSMUST00000189980.7 ENSMUST00000190158.2 |
||
| CDS-3UTR CCA 90 bp | TCCAATGTCACAGATTCTGCAGGAAGAGAAATCCAAGGGTGTACAGTATTCCTGTTCCAAGTAAGCCCTTaGCGCCCACGGTGGGTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: SNVTDSAGREIQGCTVFLFQVSP*RPRWVL Trigger: GAGGACCCACCGTGGGCGCCAAGGGCTTACTTGGAA...CAGGAATACTGTACACCCTTGGATTTCTCTTCCTGCAGAATCTGTGACATTGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000052332.15 ENSMUST00000185788.7 ENSMUST00000189980.7 ENSMUST00000190158.2 |
||
| CDS-3UTR TCA 90 bp | TTGTATGCTTCATTCATTTCACTGGGAGGAAATTCCCAGGGCCTCAAGCTAATCGGACTTGGGGGCTTCTaGGTTGGAGGTGTCGTACGT | + |
|
Preference number: 4 (lower is better) Translates to: LYASFISLGGNSQGLKLIGLGGF*VGGVVR Trigger: ACGTACGACACCTCCAACTCAGAAGCCCCCAAGTCC...GATTAGCTTGAGGCCCTGGGAATTTCCTCCCAGTGAAATGAATGAAGCATACAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENSMUST00000052332.15 ENSMUST00000185788.7 ENSMUST00000186097.7 ENSMUST00000187709.7 ENSMUST00000188594.7 ENSMUST00000189980.7 ENSMUST00000190158.2 |
||
| CDS-3UTR TCA 90 bp | CATGTTCTCCATGAGGAGAAAAGAGTAAAGCAAGCTGTACTGCAGAAAGGTGACGGACTTGGGGGCTTCTaGGTTGGAGGTGTCGTACGT | + |
|
Preference number: 4 (lower is better) Translates to: HVLHEEKRVKQAVLQKGDGLGGF*VGGVVR Trigger: ACGTACGACACCTCCAACTCAGAAGCCCCCAAGTCC...GTCACCTTTCTGCAGTACAGCTTGCTTTACTCTTTTCTCCTCATGGAGAACATG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000052332.15 ENSMUST00000188618.7 |
||
| CDS-3UTR TCA 90 bp | GTCACAGATTCTGCAGGAAGAGAAATCCAAGGGTGTACAGTATTCCTGAGAAAGGGACTTGGGGGCTTCTaGGTTGGAGGTGTCGTACGT | + |
|
Preference number: 4 (lower is better) Translates to: VTDSAGREIQGCTVFLRKGLGGF*VGGVVR Trigger: ACGTACGACACCTCCAACTCAGAAGCCCCCAAGTCC...CTTTCTCAGGAATACTGTACACCCTTGGATTTCTCTTCCTGCAGAATCTGTGAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000052332.15 ENSMUST00000185788.7 ENSMUST00000189980.7 ENSMUST00000190158.2 |
||
| CDS-3UTR TCA 90 bp | AAACACTGGTTCCTTTCCTCTCCATATACTGAAAGTAAAGGGCAAGGGTGTCCACTCCGACTACTTGGGTaGCTTCCTCCACTGCTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: KHWFLSSPYTESKGQGCPLRLLG*LPPLLP Trigger: TGGGAGCAGTGGAGGAAGTCACCCAAGTAGTCGGAG...TGGACACCCTTGCCCTTTACTTTCAGTATATGGAGAGGAAAGGAACCAGTGTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052332.15 ENSMUST00000185788.7 ENSMUST00000189980.7 |
||
| CDS-3UTR TCA 90 bp | TTGTATGCTTCATTCATTTCACTGGGAGGAAATTCCCAGGGCCTCAAGCTAATCCTCCGACTACTTGGGTaGCTTCCTCCACTGCTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: LYASFISLGGNSQGLKLILRLLG*LPPLLP Trigger: TGGGAGCAGTGGAGGAAGTCACCCAAGTAGTCGGAG...GATTAGCTTGAGGCCCTGGGAATTTCCTCCCAGTGAAATGAATGAAGCATACAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000052332.15 ENSMUST00000185788.7 ENSMUST00000186097.7 ENSMUST00000187709.7 ENSMUST00000188594.7 ENSMUST00000189980.7 ENSMUST00000190158.2 |
||
| CDS-3UTR TCA 90 bp | CCAGTGCAAGTCTTCAGCACAAAGGATTTCACAAGTGTTTTCTGCAAACCCCAACTCCGACTACTTGGGTaGCTTCCTCCACTGCTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: PVQVFSTKDFTSVFCKPQLRLLG*LPPLLP Trigger: TGGGAGCAGTGGAGGAAGTCACCCAAGTAGTCGGAG...TTGGGGTTTGCAGAAAACACTTGTGAAATCCTTTGTGCTGAAGACTTGCACTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000052332.15 ENSMUST00000188618.7 ENSMUST00000189980.7 |
||
| CDS-3UTR TCA 90 bp | TACCCCCAGTGCAAGTCTTCAGCACAAAGGATTTCACAAGTGTTTTCTGCAAACCTCCGACTACTTGGGTaGCTTCCTCCACTGCTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: YPQCKSSAQRISQVFSANLRLLG*LPPLLP Trigger: TGGGAGCAGTGGAGGAAGTCACCCAAGTAGTCGGAG...GTTTGCAGAAAACACTTGTGAAATCCTTTGTGCTGAAGACTTGCACTGGGGGTA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000052332.15 ENSMUST00000188618.7 ENSMUST00000189980.7 |
||
| CDS-3UTR TCA 90 bp | TTCATTTCACTGGGAGGAAATTCCCAGGGCCTCAAGCTAATCTGGGAAGACCTGCTGAAGGCTTGTTTGTaGCGTTATGGAAGGAGGACG | + |
|
Preference number: 4 (lower is better) Translates to: FISLGGNSQGLKLIWEDLLKACL*RYGRRT Trigger: CGTCCTCCTTCCATAACGTCACAAACAAGCCTTCAG...CAGGTCTTCCCAGATTAGCTTGAGGCCCTGGGAATTTCCTCCCAGTGAAATGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000052332.15 ENSMUST00000185788.7 ENSMUST00000186097.7 ENSMUST00000187709.7 ENSMUST00000188594.7 ENSMUST00000189980.7 ENSMUST00000190158.2 |
||
| CDS-3UTR GCA 90 bp | TTCATTTCACTGGGAGGAAATTCCCAGGGCCTCAAGCTAATCTGGGAAGACCTGTCTTCTAGGGCTCGCTaGTTATCTGGTGACTGGATG | + |
|
Preference number: 4 (lower is better) Translates to: FISLGGNSQGLKLIWEDLSSRAR*LSGDWM Trigger: CATCCAGTCACCAGATAAGCAGCGAGCCCTAGAAGA...CAGGTCTTCCCAGATTAGCTTGAGGCCCTGGGAATTTCCTCCCAGTGAAATGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000052332.15 ENSMUST00000187709.7 ENSMUST00000188594.7 ENSMUST00000189980.7 |
||
| CDS-3UTR GCA 90 bp | TTGTATGCTTCATTCATTTCACTGGGAGGAAATTCCCAGGGCCTCAAGCTAATCCTCACAGGGCTCTGCTaGGAGGGAGCCATATTACGG | + |
|
Preference number: 4 (lower is better) Translates to: LYASFISLGGNSQGLKLILTGLC*EGAILR Trigger: CCGTAATATGGCTCCCTCGCAGCAGAGCCCTGTGAG...GATTAGCTTGAGGCCCTGGGAATTTCCTCCCAGTGAAATGAATGAAGCATACAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000052332.15 ENSMUST00000186097.7 ENSMUST00000187709.7 ENSMUST00000189980.7 |
||
| CDS-3UTR GCA 90 bp | TACCCCCAGTGCAAGTCTTCAGCACAAAGGATTTCACAAGTGTTTTCTGCAAACCTCACAGGGCTCTGCTaGGAGGGAGCCATATTACGG | + |
|
Preference number: 4 (lower is better) Translates to: YPQCKSSAQRISQVFSANLTGLC*EGAILR Trigger: CCGTAATATGGCTCCCTCGCAGCAGAGCCCTGTGAG...GTTTGCAGAAAACACTTGTGAAATCCTTTGTGCTGAAGACTTGCACTGGGGGTA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000052332.15 ENSMUST00000188618.7 ENSMUST00000189980.7 |
||
| CDS-3UTR GCA 90 bp | TACCCCCAGTGCAAGTCTTCAGCACAAAGGATTTCACAAGTGTTTTCTGCAAACCGCTGTTCTCCCGACTaGTGCTCCGACTACTTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: YPQCKSSAQRISQVFSANRCSPD*CSDYLG Trigger: ACCCAAGTAGTCGGAGCAGCAGTCGGGAGAACAGCG...GTTTGCAGAAAACACTTGTGAAATCCTTTGTGCTGAAGACTTGCACTGGGGGTA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000052332.15 ENSMUST00000188618.7 ENSMUST00000189980.7 |
||
| CDS-3UTR GCA 90 bp | TTGTATGCTTCATTCATTTCACTGGGAGGAAATTCCCAGGGCCTCAAGCTAATCAGGGGTGGGGACAGATaGAGAAGTAGCAGGAAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: LYASFISLGGNSQGLKLIRGGDR*RSSRKG Trigger: CCCCTTCCTGCTACTTCTGCATCTGTCCCCACCCCT...GATTAGCTTGAGGCCCTGGGAATTTCCTCCCAGTGAAATGAATGAAGCATACAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000185788.7 ENSMUST00000186097.7 ENSMUST00000188594.7 ENSMUST00000190158.2 |
||
| CDS-3UTR GCA 90 bp | TTCATCTGGAGGTGCTTAATGGCGCACACAAGGAATGTTACTGACAACAGTTGTAGGGGTGGGGACAGATaGAGAAGTAGCAGGAAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: FIWRCLMAHTRNVTDNSCRGGDR*RSSRKG Trigger: CCCCTTCCTGCTACTTCTGCATCTGTCCCCACCCCT...ACAACTGTTGTCAGTAACATTCCTTGTGTGCGCCATTAAGCACCTCCAGATGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000188618.7 |
||
| CDS-3UTR CCA 90 bp | TTCATTTCACTGGGAGGAAATTCCCAGGGCCTCAAGCTAATCTGGGAAGACCTGGAGTGGTGTAGGCTTTaGTTTCTTCTAGGGCTCGCT | + |
|
Preference number: 4 (lower is better) Translates to: FISLGGNSQGLKLIWEDLEWCRL*FLLGLA Trigger: AGCGAGCCCTAGAAGAAACCAAAGCCTACACCACTC...CAGGTCTTCCCAGATTAGCTTGAGGCCCTGGGAATTTCCTCCCAGTGAAATGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000052332.15 ENSMUST00000187709.7 ENSMUST00000188594.7 ENSMUST00000189980.7 |
||
| CDS-3UTR CCA 90 bp | CACTCGGCAGGCAGAGGCAGGTGGATTTCTGAGTTTGAGGCCAGCCTGGTCTACGGCGCAATAATCTTATaGGTCCTTGAAGTGTTTTTA | + |
|
Preference number: 4 (lower is better) Translates to: HSAGRGRWISEFEASLVYGAIIL*VLEVFL Trigger: TAAAAACACTTCAAGGACCCATAAGATTATTGCGCC...GTAGACCAGGCTGGCCTCAAACTCAGAAATCCACCTGCCTCTGCCTGCCGAGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000052332.15 ENSMUST00000188618.7 ENSMUST00000189980.7 |
||
| CDS-3UTR CCA 90 bp | TTCATTTCACTGGGAGGAAATTCCCAGGGCCTCAAGCTAATCTGGGAAGACCTGTCGAATATAACGAACTaGCCGCTCAAGGTTGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: FISLGGNSQGLKLIWEDLSNITN*PLKVGW Trigger: CCAGCCAACCTTGAGCGGCCAGTTCGTTATATTCGA...CAGGTCTTCCCAGATTAGCTTGAGGCCCTGGGAATTTCCTCCCAGTGAAATGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000052332.15 ENSMUST00000185788.7 ENSMUST00000187709.7 ENSMUST00000188594.7 ENSMUST00000189980.7 |
||
| CDS-3UTR CCA 90 bp | CCAGTGCAAGTCTTCAGCACAAAGGATTTCACAAGTGTTTTCTGCAAACCCCAACACTGGAGGACGCACTaGCTCCAGTGTTCGATAGGG | + |
|
Preference number: 4 (lower is better) Translates to: PVQVFSTKDFTSVFCKPQHWRTH*LQCSIG Trigger: CCCTATCGAACACTGGAGCCAGTGCGTCCTCCAGTG...TTGGGGTTTGCAGAAAACACTTGTGAAATCCTTTGTGCTGAAGACTTGCACTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000052332.15 ENSMUST00000188618.7 ENSMUST00000189980.7 |
||
| CDS-3UTR CCA 90 bp | TGCTTCATTCATTTCACTGGGAGGAAATTCCCAGGGCCTCAAGCTAATCTGGGAATCATTTGGTACCACTaGAGGACGCACTGGCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: CFIHFTGRKFPGPQANLGIIWYH*RTHWLQ Trigger: CTGGAGCCAGTGCGTCCTCCAGTGGTACCAAATGAT...TCCCAGATTAGCTTGAGGCCCTGGGAATTTCCTCCCAGTGAAATGAATGAAGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000052332.15 ENSMUST00000186097.7 ENSMUST00000187709.7 ENSMUST00000189980.7 |
||
| CDS-3UTR CCA 90 bp | TTGTATGCTTCATTCATTTCACTGGGAGGAAATTCCCAGGGCCTCAAGCTAATCGCCCCCTATTGTAGGTaGTGTATGGCGAGAGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LYASFISLGGNSQGLKLIAPYCR*CMARGR Trigger: CCTGCCTCTCGCCATACACCACCTACAATAGGGGGC...GATTAGCTTGAGGCCCTGGGAATTTCCTCCCAGTGAAATGAATGAAGCATACAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENSMUST00000052332.15 ENSMUST00000185788.7 ENSMUST00000186097.7 ENSMUST00000187709.7 ENSMUST00000188594.7 ENSMUST00000189980.7 ENSMUST00000190158.2 |
||
| CDS-3UTR CCA 90 bp | CAAAGCAGAGGCAATGAGCATCCAATGTCACAGATTCTGCAGGAAGAGAAATCCCTCTTCATAATCTTCTaGAGGAGGCGGTGGAGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: QSRGNEHPMSQILQEEKSLFIIF*RRRWRG Trigger: CCCCCTCCACCGCCTCCTCCAGAAGATTATGAAGAG...GGATTTCTCTTCCTGCAGAATCTGTGACATTGGATGCTCATTGCCTCTGCTTTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052332.15 ENSMUST00000185788.7 ENSMUST00000189980.7 |
||
| CDS-3UTR TCA 90 bp | CTAGACAGCATAATGCAAATGACAGCAAGAAGATCCACTTGTTCAGACTTGGCTGGACTTGGGGGCTTCTaGGTTGGAGGTGTCGTACGT | + |
|
Preference number: 4 (lower is better) Translates to: LDSIMQMTARRSTCSDLAGLGGF*VGGVVR Trigger: ACGTACGACACCTCCAACTCAGAAGCCCCCAAGTCC...AGCCAAGTCTGAACAAGTGGATCTTCTTGCTGTCATTTGCATTATGCTGTCTAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000052332.15 ENSMUST00000185788.7 ENSMUST00000187709.7 ENSMUST00000189980.7 ENSMUST00000190158.2 |
||
| CDS-3UTR GCA 90 bp | TGCTTCATTCATTTCACTGGGAGGAAATTCCCAGGGCCTCAAGCTAATCTGGGATCTTCTAGGGCTCGCTaGTTATCTGGTGACTGGATG | + |
|
Preference number: 4 (lower is better) Translates to: CFIHFTGRKFPGPQANLGSSRAR*LSGDWM Trigger: CATCCAGTCACCAGATAAGCAGCGAGCCCTAGAAGA...TCCCAGATTAGCTTGAGGCCCTGGGAATTTCCTCCCAGTGAAATGAATGAAGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000052332.15 ENSMUST00000187709.7 ENSMUST00000188594.7 ENSMUST00000189980.7 |
||
| CDS-3UTR GCA 90 bp | TTGTATGCTTCATTCATTTCACTGGGAGGAAATTCCCAGGGCCTCAAGCTAATCGTCCTCACAGGGCTCTaGTGCGAGGGAGCCATATTA | + |
|
Preference number: 4 (lower is better) Translates to: LYASFISLGGNSQGLKLIVLTGL*CEGAIL Trigger: TAATATGGCTCCCTCGCAGCAGAGCCCTGTGAGGAC...GATTAGCTTGAGGCCCTGGGAATTTCCTCCCAGTGAAATGAATGAAGCATACAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000052332.15 ENSMUST00000186097.7 ENSMUST00000187709.7 ENSMUST00000189980.7 |
||
| CDS-3UTR GCA 90 bp | AGATTCTGCAGGAAGAGAAATCCAAGGGTGTACAGTATTCCTGAGAAAGATCCCTGTTCTCCCGACTGCTaGTCCGACTACTTGGGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: RFCRKRNPRVYSIPEKDPCSPDC*SDYLGD Trigger: GTCACCCAAGTAGTCGGAGCAGCAGTCGGGAGAACA...GGGATCTTTCTCAGGAATACTGTACACCCTTGGATTTCTCTTCCTGCAGAATCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000052332.15 ENSMUST00000185788.7 ENSMUST00000189980.7 ENSMUST00000190158.2 |
||
| CDS-3UTR GCA 90 bp | TGTCATCCTTATAATCTACAAACAGGACAGGGTGCAAGGGAGTTCAAGGTTAACAGGGGTGGGGACAGATaGAGAAGTAGCAGGAAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: CHPYNLQTGQGAREFKVNRGGDR*RSSRKG Trigger: CCCCTTCCTGCTACTTCTGCATCTGTCCCCACCCCT...GTTAACCTTGAACTCCCTTGCACCCTGTCCTGTTTGTAGATTATAAGGATGACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000185788.7 |
||
| CDS-3UTR CCA 90 bp | GGGAGGAAATTCCCAGGGCCTCAAGCTAATCTGGGAAGACCTGACCTCCTGAGATCTGTAGGACATTGTTaGCCAAGGTGTTTATCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: GRKFPGPQANLGRPDLLRSVGHC*PRCLSD Trigger: ATCTGATAAACACCTTGGCCAACAATGTCCTACAGA...TCTCAGGAGGTCAGGTCTTCCCAGATTAGCTTGAGGCCCTGGGAATTTCCTCCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000052332.15 ENSMUST00000187709.7 ENSMUST00000188594.7 ENSMUST00000189980.7 |
||
| CDS-3UTR CCA 90 bp | TGCTTCATTCATTTCACTGGGAGGAAATTCCCAGGGCCTCAAGCTAATCTGGGACCGCTCAAGGTTGGCTaGCGCAATAATCTTATGGGT | + |
|
Preference number: 4 (lower is better) Translates to: CFIHFTGRKFPGPQANLGPLKVG*RNNLMG Trigger: ACCCATAAGATTATTGCGCCAGCCAACCTTGAGCGG...TCCCAGATTAGCTTGAGGCCCTGGGAATTTCCTCCCAGTGAAATGAATGAAGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000052332.15 ENSMUST00000185788.7 ENSMUST00000187709.7 ENSMUST00000188594.7 ENSMUST00000189980.7 |
||
| CDS-3UTR CCA 90 bp | AGTACCTACACCACATTTCACATTGCTTTCACTGGCTGCTATCAGCAATGCAGTTGGGGGCTTCTGAGTTaGAGGTGTCGTACGTGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: STYTTFHIAFTGCYQQCSWGLLS*RCRTWQ Trigger: TTGCCACGTACGACACCTCCAACTCAGAAGCCCCCA...ACTGCATTGCTGATAGCAGCCAGTGAAAGCAATGTGAAATGTGGTGTAGGTACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000052332.15 ENSMUST00000185788.7 ENSMUST00000189980.7 |
||
| CDS-3UTR CCA 90 bp | TTGTATGCTTCATTCATTTCACTGGGAGGAAATTCCCAGGGCCTCAAGCTAATCACCTGGAAAGACGCTTaGAGGAGACGGAGTAGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: LYASFISLGGNSQGLKLITWKDA*RRRSRH Trigger: GTGCCTACTCCGTCTCCTCCAAGCGTCTTTCCAGGT...GATTAGCTTGAGGCCCTGGGAATTTCCTCCCAGTGAAATGAATGAAGCATACAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052332.15 ENSMUST00000187709.7 |
||
| CDS-3UTR CCA 90 bp | CGTTCATATACAGTCTTGCTTGGGTCCATAATGGAACTAAAGGTTCAGAGGACTGCCCCCTATTGTAGGTaGTGTATGGCGAGAGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: RSYTVLLGSIMELKVQRTAPYCR*CMARGR Trigger: CCTGCCTCTCGCCATACACCACCTACAATAGGGGGC...AGTCCTCTGAACCTTTAGTTCCATTATGGACCCAAGCAAGACTGTATATGAACG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000052332.15 ENSMUST00000188618.7 ENSMUST00000189980.7 |
||
| CDS-3UTR CCA 90 bp | CCAGTGCAAGTCTTCAGCACAAAGGATTTCACAAGTGTTTTCTGCAAACCCCAACTCTTCATAATCTTCTaGAGGAGGCGGTGGAGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: PVQVFSTKDFTSVFCKPQLFIIF*RRRWRG Trigger: CCCCCTCCACCGCCTCCTCCAGAAGATTATGAAGAG...TTGGGGTTTGCAGAAAACACTTGTGAAATCCTTTGTGCTGAAGACTTGCACTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000052332.15 ENSMUST00000188618.7 ENSMUST00000189980.7 |
||
| CDS-3UTR CCA 90 bp | GAAAGATCCCAGATATTTTTCCTCAAGTCAGTCTTGGTCTTACATGTTTTAGCTCCTTGGCGCCCACGGTaGGTCCTCTTCAGCGTACGG | + |
|
Preference number: 4 (lower is better) Translates to: ERSQIFFLKSVLVLHVLAPWRPR*VLFSVR Trigger: CCGTACGCTGAAGAGGACCCACCGTGGGCGCCAAGG...AGCTAAAACATGTAAGACCAAGACTGACTTGAGGAAAAATATCTGGGATCTTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000052332.15 ENSMUST00000185788.7 ENSMUST00000189980.7 ENSMUST00000190158.2 |
||
| CDS-3UTR CCA 90 bp | GAGAAATGGTCACATTTTCAATCTAGACAGCATAATGCAAATGACAGCAAGAAGCCTTGGCGCCCACGGTaGGTCCTCTTCAGCGTACGG | + |
|
Preference number: 4 (lower is better) Translates to: EKWSHFQSRQHNANDSKKPWRPR*VLFSVR Trigger: CCGTACGCTGAAGAGGACCCACCGTGGGCGCCAAGG...CTTCTTGCTGTCATTTGCATTATGCTGTCTAGATTGAAAATGTGACCATTTCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000052332.15 ENSMUST00000185788.7 ENSMUST00000187709.7 ENSMUST00000189980.7 ENSMUST00000190158.2 |
||
| CDS-3UTR CCA 90 bp | ATCCCAGATATTTTTCCTCAAGTCAGTCTTGGTCTTACATGTTTTAGCTACATGCCTTGGCGCCCACGGTaGGTCCTCTTCAGCGTACGG | + |
|
Preference number: 4 (lower is better) Translates to: IPDIFPQVSLGLTCFSYMPWRPR*VLFSVR Trigger: CCGTACGCTGAAGAGGACCCACCGTGGGCGCCAAGG...CATGTAGCTAAAACATGTAAGACCAAGACTGACTTGAGGAAAAATATCTGGGAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000052332.15 ENSMUST00000185788.7 ENSMUST00000189980.7 ENSMUST00000190158.2 |
||
| CDS-3UTR CCA 90 bp | AGCATAATGCAAATGACAGCAAGAAGATCCACTTGTTCAGACTTGGCTTTCAGTTTCCAAGTAAGCCCTTaGCGCCCACGGTGGGTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: SIMQMTARRSTCSDLAFSFQVSP*RPRWVL Trigger: GAGGACCCACCGTGGGCGCCAAGGGCTTACTTGGAA...ACTGAAAGCCAAGTCTGAACAAGTGGATCTTCTTGCTGTCATTTGCATTATGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000052332.15 ENSMUST00000185788.7 ENSMUST00000187709.7 ENSMUST00000189980.7 ENSMUST00000190158.2 |
||
| CDS-3UTR TCA 90 bp | CAATCTAGACAGCATAATGCAAATGACAGCAAGAAGATCCACTTGTTCAGACTTAAGTGTCCCCTTCCCTaGCATAGGGGGACTTGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: QSRQHNANDSKKIHLFRLKCPLP*HRGTWG Trigger: CCCCCAAGTCCCCCTATGTCAGGGAAGGGGACACTT...AAGTCTGAACAAGTGGATCTTCTTGCTGTCATTTGCATTATGCTGTCTAGATTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000052332.15 ENSMUST00000185788.7 ENSMUST00000187709.7 ENSMUST00000189980.7 ENSMUST00000190158.2 |
||
| CDS-3UTR GCA 90 bp | TATTCCTGGTGCCTACCACCAGTTGTTTCTATGACTACAAAAGCTAGTTGTTTGCTCACAGGGCTCTGCTaGGAGGGAGCCATATTACGG | + |
|
Preference number: 4 (lower is better) Translates to: YSWCLPPVVSMTTKASCLLTGLC*EGAILR Trigger: CCGTAATATGGCTCCCTCGCAGCAGAGCCCTGTGAG...CAAACAACTAGCTTTTGTAGTCATAGAAACAACTGGTGGTAGGCACCAGGAATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052332.15 ENSMUST00000188618.7 ENSMUST00000189980.7 |
||
| CDS-3UTR GCA 90 bp | CTAGACAGCATAATGCAAATGACAGCAAGAAGATCCACTTGTTCAGACTTGGCTTGTTCTCCCGACTGCTaGTCCGACTACTTGGGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: LDSIMQMTARRSTCSDLACSPDC*SDYLGD Trigger: GTCACCCAAGTAGTCGGAGCAGCAGTCGGGAGAACA...AGCCAAGTCTGAACAAGTGGATCTTCTTGCTGTCATTTGCATTATGCTGTCTAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000052332.15 ENSMUST00000185788.7 ENSMUST00000187709.7 ENSMUST00000189980.7 ENSMUST00000190158.2 |
||
| CDS-3UTR GCA 90 bp | GTTCATGTTGGTATGCCTTTCATGATTGAGAAATGGTCACATTTTCAATCTAGACAGGAAGGGGAGGAGTaGCAGCAGAGCCAGCAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: VHVGMPFMIEKWSHFQSRQEGEE*QQSQQG Trigger: CCCCTGCTGGCTCTGCTGGCACTCCTCCCCTTCCTG...TCTAGATTGAAAATGTGACCATTTCTCAATCATGAAAGGCATACCAACATGAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000185788.7 ENSMUST00000190158.2 |
||
| CDS-3UTR CCA 90 bp | GTACAAGGCCTGCATCTGGATTACAACAGCTTTACTTCCTCTTCGGTAGATGAGGAGTGGTGTAGGCTTTaGTTTCTTCTAGGGCTCGCT | + |
|
Preference number: 4 (lower is better) Translates to: VQGLHLDYNSFTSSSVDEEWCRL*FLLGLA Trigger: AGCGAGCCCTAGAAGAAACCAAAGCCTACACCACTC...CTCATCTACCGAAGAGGAAGTAAAGCTGTTGTAATCCAGATGCAGGCCTTGTAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052332.15 ENSMUST00000188618.7 ENSMUST00000189980.7 |
||
| CDS-3UTR CCA 90 bp | AGATTCTGCAGGAAGAGAAATCCAAGGGTGTACAGTATTCCTGAGAAAGATCCCATCATTTGGTACCACTaGAGGACGCACTGGCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: RFCRKRNPRVYSIPEKDPIIWYH*RTHWLQ Trigger: CTGGAGCCAGTGCGTCCTCCAGTGGTACCAAATGAT...GGGATCTTTCTCAGGAATACTGTACACCCTTGGATTTCTCTTCCTGCAGAATCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052332.15 ENSMUST00000189980.7 |
||
| CDS-3UTR CCA 90 bp | TTGTATGCTTCATTCATTTCACTGGGAGGAAATTCCCAGGGCCTCAAGCTAATCATCATTTGGTACCACTaGAGGACGCACTGGCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: LYASFISLGGNSQGLKLIIIWYH*RTHWLQ Trigger: CTGGAGCCAGTGCGTCCTCCAGTGGTACCAAATGAT...GATTAGCTTGAGGCCCTGGGAATTTCCTCCCAGTGAAATGAATGAAGCATACAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000052332.15 ENSMUST00000186097.7 ENSMUST00000187709.7 ENSMUST00000189980.7 |
||
| CDS-3UTR CCA 90 bp | TACCCCCAGTGCAAGTCTTCAGCACAAAGGATTTCACAAGTGTTTTCTGCAAACATCATTTGGTACCACTaGAGGACGCACTGGCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: YPQCKSSAQRISQVFSANIIWYH*RTHWLQ Trigger: CTGGAGCCAGTGCGTCCTCCAGTGGTACCAAATGAT...GTTTGCAGAAAACACTTGTGAAATCCTTTGTGCTGAAGACTTGCACTGGGGGTA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000052332.15 ENSMUST00000188618.7 ENSMUST00000189980.7 |
||
| CDS-3UTR CCA 90 bp | TGCTTCATTCATTTCACTGGGAGGAAATTCCCAGGGCCTCAAGCTAATCTGGGAAGGTACGTAATCATTTaGTACCACTGGAGGACGCAC | + |
|
Preference number: 4 (lower is better) Translates to: CFIHFTGRKFPGPQANLGRYVII*YHWRTH Trigger: GTGCGTCCTCCAGTGGTACCAAATGATTACGTACCT...TCCCAGATTAGCTTGAGGCCCTGGGAATTTCCTCCCAGTGAAATGAATGAAGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000052332.15 ENSMUST00000186097.7 ENSMUST00000187709.7 ENSMUST00000189980.7 |
||
| CDS-3UTR CCA 90 bp | CATGTTCTCCATGAGGAGAAAAGAGTAAAGCAAGCTGTACTGCAGAAAGGTGACGGATTCATCAAAGACTaGCTCTTCCACAGGTGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: HVLHEEKRVKQAVLQKGDGFIKD*LFHRWG Trigger: CCCCCACCTGTGGAAGAGCCAGTCTTTGATGAATCC...GTCACCTTTCTGCAGTACAGCTTGCTTTACTCTTTTCTCCTCATGGAGAACATG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052332.15 ENSMUST00000188618.7 |
||
| CDS-3UTR CCA 90 bp | TTGTATGCTTCATTCATTTCACTGGGAGGAAATTCCCAGGGCCTCAAGCTAATCGGATTCATCAAAGACTaGCTCTTCCACAGGTGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: LYASFISLGGNSQGLKLIGFIKD*LFHRWG Trigger: CCCCCACCTGTGGAAGAGCCAGTCTTTGATGAATCC...GATTAGCTTGAGGCCCTGGGAATTTCCTCCCAGTGAAATGAATGAAGCATACAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000052332.15 ENSMUST00000185788.7 ENSMUST00000186097.7 ENSMUST00000187709.7 ENSMUST00000188594.7 ENSMUST00000189980.7 ENSMUST00000190158.2 |
||
| CDS-3UTR CCA 90 bp | CTAGACAGCATAATGCAAATGACAGCAAGAAGATCCACTTGTTCAGACTTGGCTCTCTTCATAATCTTCTaGAGGAGGCGGTGGAGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: LDSIMQMTARRSTCSDLALFIIF*RRRWRG Trigger: CCCCCTCCACCGCCTCCTCCAGAAGATTATGAAGAG...AGCCAAGTCTGAACAAGTGGATCTTCTTGCTGTCATTTGCATTATGCTGTCTAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000052332.15 ENSMUST00000185788.7 ENSMUST00000187709.7 ENSMUST00000189980.7 ENSMUST00000190158.2 |
||
| CDS-3UTR CCA 90 bp | GTTCATGTTGGTATGCCTTTCATGATTGAGAAATGGTCACATTTTCAATCTAGACCTTGGCGCCCACGGTaGGTCCTCTTCAGCGTACGG | + |
|
Preference number: 4 (lower is better) Translates to: VHVGMPFMIEKWSHFQSRPWRPR*VLFSVR Trigger: CCGTACGCTGAAGAGGACCCACCGTGGGCGCCAAGG...TCTAGATTGAAAATGTGACCATTTCTCAATCATGAAAGGCATACCAACATGAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000052332.15 ENSMUST00000185788.7 ENSMUST00000189980.7 ENSMUST00000190158.2 |
||
| CDS-3UTR TCA 90 bp | TTTAGAAGGGGTGAATGCAGGTTGCACTTGAATTCCTTTAAGCAATCTGAATACGGACTTGGGGGCTTCTaGGTTGGAGGTGTCGTACGT | + |
|
Preference number: 4 (lower is better) Translates to: FRRGECRLHLNSFKQSEYGLGGF*VGGVVR Trigger: ACGTACGACACCTCCAACTCAGAAGCCCCCAAGTCC...GTATTCAGATTGCTTAAAGGAATTCAAGTGCAACCTGCATTCACCCCTTCTAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000052332.15 ENSMUST00000188618.7 |
||
| CDS-3UTR TCA 90 bp | GAGAAATGGTCACATTTTCAATCTAGACAGCATAATGCAAATGACAGCAAGAAGAAGTGTCCCCTTCCCTaGCATAGGGGGACTTGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: EKWSHFQSRQHNANDSKKKCPLP*HRGTWG Trigger: CCCCCAAGTCCCCCTATGTCAGGGAAGGGGACACTT...CTTCTTGCTGTCATTTGCATTATGCTGTCTAGATTGAAAATGTGACCATTTCTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000052332.15 ENSMUST00000185788.7 ENSMUST00000187709.7 ENSMUST00000189980.7 ENSMUST00000190158.2 |
||
| CDS-3UTR TCA 90 bp | TTGTATGCTTCATTCATTTCACTGGGAGGAAATTCCCAGGGCCTCAAGCTAATCCTGAAGGCTTGTTTGTaGCGTTATGGAAGGAGGACG | + |
|
Preference number: 4 (lower is better) Translates to: LYASFISLGGNSQGLKLILKACL*RYGRRT Trigger: CGTCCTCCTTCCATAACGTCACAAACAAGCCTTCAG...GATTAGCTTGAGGCCCTGGGAATTTCCTCCCAGTGAAATGAATGAAGCATACAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000052332.15 ENSMUST00000185788.7 ENSMUST00000186097.7 ENSMUST00000187709.7 ENSMUST00000188594.7 ENSMUST00000189980.7 ENSMUST00000190158.2 |
||
| CDS-3UTR TCA 90 bp | TATACTGAAAGTAAAGGGCAAGGGTGTCCACCAGGCCATGAGGTTAGCCCCAAAACTCCGAATAATGCATaGTGGACTCAACATAGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: YTESKGQGCPPGHEVSPKTPNNA*WTQHSS Trigger: GGAACTATGTTGAGTCCATCATGCATTATTCGGAGT...TTTGGGGCTAACCTCATGGCCTGGTGGACACCCTTGCCCTTTACTTTCAGTATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000052332.15 ENSMUST00000185788.7 ENSMUST00000189980.7 |
||
| CDS-3UTR GCA 90 bp | CATAATGCAAATGACAGCAAGAAGATCCACTTGTTCAGACTTGGCTTTCAGTTTCGCTGTTCTCCCGACTaGTGCTCCGACTACTTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: HNANDSKKIHLFRLGFQFRCSPD*CSDYLG Trigger: ACCCAAGTAGTCGGAGCAGCAGTCGGGAGAACAGCG...AAACTGAAAGCCAAGTCTGAACAAGTGGATCTTCTTGCTGTCATTTGCATTATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000052332.15 ENSMUST00000185788.7 ENSMUST00000187709.7 ENSMUST00000189980.7 ENSMUST00000190158.2 |
||
| CDS-3UTR GCA 90 bp | GAAAGATCCCAGATATTTTTCCTCAAGTCAGTCTTGGTCTTACATGTTTTAGCTCACTGCTCCCACTGCTaGCAAGTGTCCCCTTCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: ERSQIFFLKSVLVLHVLAHCSHC*QVSPSL Trigger: CAGGGAAGGGGACACTTGGCAGCAGTGGGAGCAGTG...AGCTAAAACATGTAAGACCAAGACTGACTTGAGGAAAAATATCTGGGATCTTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000185788.7 ENSMUST00000190158.2 |
||
| CDS-3UTR GCA 90 bp | GAGAAATGGTCACATTTTCAATCTAGACAGCATAATGCAAATGACAGCAAGAAGCACTGCTCCCACTGCTaGCAAGTGTCCCCTTCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: EKWSHFQSRQHNANDSKKHCSHC*QVSPSL Trigger: CAGGGAAGGGGACACTTGGCAGCAGTGGGAGCAGTG...CTTCTTGCTGTCATTTGCATTATGCTGTCTAGATTGAAAATGTGACCATTTCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000185788.7 ENSMUST00000190158.2 |
||
| CDS-3UTR CCA 90 bp | GTCACAGATTCTGCAGGAAGAGAAATCCAAGGGTGTACAGTATTCCTGAGAAAGGAGTGGTGTAGGCTTTaGTTTCTTCTAGGGCTCGCT | + |
|
Preference number: 4 (lower is better) Translates to: VTDSAGREIQGCTVFLRKEWCRL*FLLGLA Trigger: AGCGAGCCCTAGAAGAAACCAAAGCCTACACCACTC...CTTTCTCAGGAATACTGTACACCCTTGGATTTCTCTTCCTGCAGAATCTGTGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052332.15 ENSMUST00000189980.7 |
||
| CDS-3UTR CCA 90 bp | ACCTCAGTACATGAAGTACCTACACCACATTTCACATTGCTTTCACTGGCTGCTGAGTGGTGTAGGCTTTaGTTTCTTCTAGGGCTCGCT | + |
|
Preference number: 4 (lower is better) Translates to: TSVHEVPTPHFTLLSLAAEWCRL*FLLGLA Trigger: AGCGAGCCCTAGAAGAAACCAAAGCCTACACCACTC...AGCAGCCAGTGAAAGCAATGTGAAATGTGGTGTAGGTACTTCATGTACTGAGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052332.15 ENSMUST00000189980.7 |
||
| CDS-3UTR CCA 90 bp | TTGTATGCTTCATTCATTTCACTGGGAGGAAATTCCCAGGGCCTCAAGCTAATCCCGCTCAAGGTTGGCTaGCGCAATAATCTTATGGGT | + |
|
Preference number: 4 (lower is better) Translates to: LYASFISLGGNSQGLKLIPLKVG*RNNLMG Trigger: ACCCATAAGATTATTGCGCCAGCCAACCTTGAGCGG...GATTAGCTTGAGGCCCTGGGAATTTCCTCCCAGTGAAATGAATGAAGCATACAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000052332.15 ENSMUST00000185788.7 ENSMUST00000187709.7 ENSMUST00000188594.7 ENSMUST00000189980.7 |
||
| CDS-3UTR CCA 90 bp | CCTCAGTACATGAAGTACCTACACCACATTTCACATTGCTTTCACTGGCTGCTACCGCTCAAGGTTGGCTaGCGCAATAATCTTATGGGT | + |
|
Preference number: 4 (lower is better) Translates to: PQYMKYLHHISHCFHWLLPLKVG*RNNLMG Trigger: ACCCATAAGATTATTGCGCCAGCCAACCTTGAGCGG...TAGCAGCCAGTGAAAGCAATGTGAAATGTGGTGTAGGTACTTCATGTACTGAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052332.15 ENSMUST00000185788.7 ENSMUST00000189980.7 |
||
| CDS-3UTR CCA 90 bp | TCCAATGTCACAGATTCTGCAGGAAGAGAAATCCAAGGGTGTACAGTATTCCTGTCGAATATAACGAACTaGCCGCTCAAGGTTGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: SNVTDSAGREIQGCTVFLSNITN*PLKVGW Trigger: CCAGCCAACCTTGAGCGGCCAGTTCGTTATATTCGA...CAGGAATACTGTACACCCTTGGATTTCTCTTCCTGCAGAATCTGTGACATTGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052332.15 ENSMUST00000185788.7 ENSMUST00000189980.7 |
||
| CDS-3UTR CCA 90 bp | CCAGTGCAAGTCTTCAGCACAAAGGATTTCACAAGTGTTTTCTGCAAACCCCAATCGAATATAACGAACTaGCCGCTCAAGGTTGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: PVQVFSTKDFTSVFCKPQSNITN*PLKVGW Trigger: CCAGCCAACCTTGAGCGGCCAGTTCGTTATATTCGA...TTGGGGTTTGCAGAAAACACTTGTGAAATCCTTTGTGCTGAAGACTTGCACTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000052332.15 ENSMUST00000188618.7 ENSMUST00000189980.7 |
||
| CDS-3UTR CCA 90 bp | AGCATAATGCAAATGACAGCAAGAAGATCCACTTGTTCAGACTTGGCTTTCAGTTGGGGGCTTCTGAGTTaGAGGTGTCGTACGTGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: SIMQMTARRSTCSDLAFSWGLLS*RCRTWQ Trigger: TTGCCACGTACGACACCTCCAACTCAGAAGCCCCCA...ACTGAAAGCCAAGTCTGAACAAGTGGATCTTCTTGCTGTCATTTGCATTATGCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000052332.15 ENSMUST00000185788.7 ENSMUST00000187709.7 ENSMUST00000189980.7 ENSMUST00000190158.2 |
||
| CDS-3UTR CCA 90 bp | TTCATTTCACTGGGAGGAAATTCCCAGGGCCTCAAGCTAATCTGGGAAGACCTGAGCCATATTACGGGTTaGGCTAGGTACGTAATCATT | + |
|
Preference number: 4 (lower is better) Translates to: FISLGGNSQGLKLIWEDLSHITG*ARYVII Trigger: AATGATTACGTACCTAGCCCAACCCGTAATATGGCT...CAGGTCTTCCCAGATTAGCTTGAGGCCCTGGGAATTTCCTCCCAGTGAAATGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000052332.15 ENSMUST00000186097.7 ENSMUST00000187709.7 ENSMUST00000189980.7 |
||
| CDS-3UTR CCA 90 bp | CAATCTAGACAGCATAATGCAAATGACAGCAAGAAGATCCACTTGTTCAGACTTGCCCCCTATTGTAGGTaGTGTATGGCGAGAGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: QSRQHNANDSKKIHLFRLAPYCR*CMARGR Trigger: CCTGCCTCTCGCCATACACCACCTACAATAGGGGGC...AAGTCTGAACAAGTGGATCTTCTTGCTGTCATTTGCATTATGCTGTCTAGATTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000052332.15 ENSMUST00000185788.7 ENSMUST00000187709.7 ENSMUST00000189980.7 ENSMUST00000190158.2 |
||
| CDS-3UTR CCA 90 bp | CATAATGCAAATGACAGCAAGAAGATCCACTTGTTCAGACTTGGCTTTCAGTTTGCCCCCTATTGTAGGTaGTGTATGGCGAGAGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: HNANDSKKIHLFRLGFQFAPYCR*CMARGR Trigger: CCTGCCTCTCGCCATACACCACCTACAATAGGGGGC...AAACTGAAAGCCAAGTCTGAACAAGTGGATCTTCTTGCTGTCATTTGCATTATG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000052332.15 ENSMUST00000185788.7 ENSMUST00000187709.7 ENSMUST00000189980.7 ENSMUST00000190158.2 |
||
| CDS-3UTR CCA 90 bp | GAAAGATCCCAGATATTTTTCCTCAAGTCAGTCTTGGTCTTACATGTTTTAGCTTTCCAAGTAAGCCCTTaGCGCCCACGGTGGGTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: ERSQIFFLKSVLVLHVLAFQVSP*RPRWVL Trigger: GAGGACCCACCGTGGGCGCCAAGGGCTTACTTGGAA...AGCTAAAACATGTAAGACCAAGACTGACTTGAGGAAAAATATCTGGGATCTTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000052332.15 ENSMUST00000185788.7 ENSMUST00000189980.7 ENSMUST00000190158.2 |
||
| CDS-3UTR TCA 90 bp | AAGAAGATCCACTTGTTCAGACTTGGCTTTCAGTTTTTGATACAAGGGGATAAAGGACTTGGGGGCTTCTaGGTTGGAGGTGTCGTACGT | + |
|
Preference number: 4 (lower is better) Translates to: KKIHLFRLGFQFLIQGDKGLGGF*VGGVVR Trigger: ACGTACGACACCTCCAACTCAGAAGCCCCCAAGTCC...TTTATCCCCTTGTATCAAAAACTGAAAGCCAAGTCTGAACAAGTGGATCTTCTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 5 transcripts: ENSMUST00000052332.15 ENSMUST00000185788.7 ENSMUST00000187709.7 ENSMUST00000189980.7 ENSMUST00000190158.2 |
||
| CDS-3UTR TCA 90 bp | GAAAGATCCCAGATATTTTTCCTCAAGTCAGTCTTGGTCTTACATGTTTTAGCTCTCCGACTACTTGGGTaGCTTCCTCCACTGCTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: ERSQIFFLKSVLVLHVLALRLLG*LPPLLP Trigger: TGGGAGCAGTGGAGGAAGTCACCCAAGTAGTCGGAG...AGCTAAAACATGTAAGACCAAGACTGACTTGAGGAAAAATATCTGGGATCTTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000052332.15 ENSMUST00000185788.7 ENSMUST00000189980.7 ENSMUST00000190158.2 |
||
| CDS-3UTR TCA 90 bp | GTTGTGCTCCATTCTGTTCCTGCCAGCATAGAACTAAATACAATGCATTCTTGCCTGAAGGCTTGTTTGTaGCGTTATGGAAGGAGGACG | + |
|
Preference number: 4 (lower is better) Translates to: VVLHSVPASIELNTMHSCLKACL*RYGRRT Trigger: CGTCCTCCTTCCATAACGTCACAAACAAGCCTTCAG...GCAAGAATGCATTGTATTTAGTTCTATGCTGGCAGGAACAGAATGGAGCACAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052332.15 ENSMUST00000188618.7 |
||
| CDS-3UTR TCA 90 bp | TGCTTCATTCATTTCACTGGGAGGAAATTCCCAGGGCCTCAAGCTAATCTGGGAACTCCGAATAATGCATaGTGGACTCAACATAGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: CFIHFTGRKFPGPQANLGTPNNA*WTQHSS Trigger: GGAACTATGTTGAGTCCATCATGCATTATTCGGAGT...TCCCAGATTAGCTTGAGGCCCTGGGAATTTCCTCCCAGTGAAATGAATGAAGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000052332.15 ENSMUST00000185788.7 ENSMUST00000186097.7 ENSMUST00000187709.7 ENSMUST00000188594.7 ENSMUST00000189980.7 ENSMUST00000190158.2 |
||
| CDS-3UTR GCA 90 bp | AATCTAGACAGCATAATGCAAATGACAGCAAGAAGATCCACTTGTTCAGACTTGTGTTCTCCCGACTGCTaGTCCGACTACTTGGGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: NLDSIMQMTARRSTCSDLCSPDC*SDYLGD Trigger: GTCACCCAAGTAGTCGGAGCAGCAGTCGGGAGAACA...CAAGTCTGAACAAGTGGATCTTCTTGCTGTCATTTGCATTATGCTGTCTAGATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000052332.15 ENSMUST00000185788.7 ENSMUST00000187709.7 ENSMUST00000189980.7 ENSMUST00000190158.2 |
||
| CDS-3UTR GCA 90 bp | AAGAAGATCCACTTGTTCAGACTTGGCTTTCAGTTTTTGATACAAGGGGATAAAAGGGGTGGGGACAGATaGAGAAGTAGCAGGAAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: KKIHLFRLGFQFLIQGDKRGGDR*RSSRKG Trigger: CCCCTTCCTGCTACTTCTGCATCTGTCCCCACCCCT...TTTATCCCCTTGTATCAAAAACTGAAAGCCAAGTCTGAACAAGTGGATCTTCTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt. Matches the following 2 transcripts: ENSMUST00000185788.7 ENSMUST00000190158.2 |
||
| CDS-3UTR GCA 90 bp | GTTGGTATGCCTTTCATGATTGAGAAATGGTCACATTTTCAATCTAGACAGCATGGTGACTTCCTCCACTaGTCCCACTGCTGCCAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: VGMPFMIEKWSHFQSRQHGDFLH*SHCCQV Trigger: CACTTGGCAGCAGTGGGAGCAGTGGAGGAAGTCACC...ATGCTGTCTAGATTGAAAATGTGACCATTTCTCAATCATGAAAGGCATACCAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000185788.7 ENSMUST00000190158.2 |
||
| CDS-3UTR GCA 90 bp | GAAAGATCCCAGATATTTTTCCTCAAGTCAGTCTTGGTCTTACATGTTTTAGCTGGTGACTTCCTCCACTaGTCCCACTGCTGCCAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: ERSQIFFLKSVLVLHVLAGDFLH*SHCCQV Trigger: CACTTGGCAGCAGTGGGAGCAGTGGAGGAAGTCACC...AGCTAAAACATGTAAGACCAAGACTGACTTGAGGAAAAATATCTGGGATCTTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000185788.7 ENSMUST00000190158.2 |
||
| CDS-3UTR CCA 90 bp | TGCTTCATTCATTTCACTGGGAGGAAATTCCCAGGGCCTCAAGCTAATCTGGGACCCATTTTCATATTCTaGGTACTCACCTTCACTCCA | + |
|
Preference number: 4 (lower is better) Translates to: CFIHFTGRKFPGPQANLGPIFIF*VLTFTP Trigger: TGGAGTGAAGGTGAGTACCCAGAATATGAAAATGGG...TCCCAGATTAGCTTGAGGCCCTGGGAATTTCCTCCCAGTGAAATGAATGAAGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052332.15 ENSMUST00000187709.7 ENSMUST00000188594.7 |
||
| CDS-3UTR CCA 90 bp | CATAATGCAAATGACAGCAAGAAGATCCACTTGTTCAGACTTGGCTTTCAGTTTTGGGGGCTTCTGAGTTaGAGGTGTCGTACGTGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: HNANDSKKIHLFRLGFQFWGLLS*RCRTWQ Trigger: TTGCCACGTACGACACCTCCAACTCAGAAGCCCCCA...AAACTGAAAGCCAAGTCTGAACAAGTGGATCTTCTTGCTGTCATTTGCATTATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000052332.15 ENSMUST00000185788.7 ENSMUST00000187709.7 ENSMUST00000189980.7 ENSMUST00000190158.2 |
||
| CDS-3UTR CCA 90 bp | CAATCTAGACAGCATAATGCAAATGACAGCAAGAAGATCCACTTGTTCAGACTTTGGGGGCTTCTGAGTTaGAGGTGTCGTACGTGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: QSRQHNANDSKKIHLFRLWGLLS*RCRTWQ Trigger: TTGCCACGTACGACACCTCCAACTCAGAAGCCCCCA...AAGTCTGAACAAGTGGATCTTCTTGCTGTCATTTGCATTATGCTGTCTAGATTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000052332.15 ENSMUST00000185788.7 ENSMUST00000187709.7 ENSMUST00000189980.7 ENSMUST00000190158.2 |
||
| CDS-3UTR CCA 90 bp | GTTGGTATGCCTTTCATGATTGAGAAATGGTCACATTTTCAATCTAGACAGCATGCCCCCTATTGTAGGTaGTGTATGGCGAGAGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: VGMPFMIEKWSHFQSRQHAPYCR*CMARGR Trigger: CCTGCCTCTCGCCATACACCACCTACAATAGGGGGC...ATGCTGTCTAGATTGAAAATGTGACCATTTCTCAATCATGAAAGGCATACCAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000052332.15 ENSMUST00000185788.7 ENSMUST00000189980.7 ENSMUST00000190158.2 |
||
| CDS-3UTR CCA 90 bp | ATCCCAGATATTTTTCCTCAAGTCAGTCTTGGTCTTACATGTTTTAGCTACATGGCCCCCTATTGTAGGTaGTGTATGGCGAGAGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: IPDIFPQVSLGLTCFSYMAPYCR*CMARGR Trigger: CCTGCCTCTCGCCATACACCACCTACAATAGGGGGC...CATGTAGCTAAAACATGTAAGACCAAGACTGACTTGAGGAAAAATATCTGGGAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000052332.15 ENSMUST00000185788.7 ENSMUST00000189980.7 ENSMUST00000190158.2 |
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| CDS-3UTR CCA 90 bp | AAGAAGATCCACTTGTTCAGACTTGGCTTTCAGTTTTTGATACAAGGGGATAAAGCCCCCTATTGTAGGTaGTGTATGGCGAGAGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: KKIHLFRLGFQFLIQGDKAPYCR*CMARGR Trigger: CCTGCCTCTCGCCATACACCACCTACAATAGGGGGC...TTTATCCCCTTGTATCAAAAACTGAAAGCCAAGTCTGAACAAGTGGATCTTCTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 5 transcripts: ENSMUST00000052332.15 ENSMUST00000185788.7 ENSMUST00000187709.7 ENSMUST00000189980.7 ENSMUST00000190158.2 |
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| CDS-3UTR CCA 90 bp | CATAATGCAAATGACAGCAAGAAGATCCACTTGTTCAGACTTGGCTTTCAGTTTCTCTTCATAATCTTCTaGAGGAGGCGGTGGAGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: HNANDSKKIHLFRLGFQFLFIIF*RRRWRG Trigger: CCCCCTCCACCGCCTCCTCCAGAAGATTATGAAGAG...AAACTGAAAGCCAAGTCTGAACAAGTGGATCTTCTTGCTGTCATTTGCATTATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000052332.15 ENSMUST00000185788.7 ENSMUST00000187709.7 ENSMUST00000189980.7 ENSMUST00000190158.2 |
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| CDS-3UTR TCA 90 bp | TATTCCTGGTGCCTACCACCAGTTGTTTCTATGACTACAAAAGCTAGTTGTTTGCTGAAGGCTTGTTTGTaGCGTTATGGAAGGAGGACG | + |
|
Preference number: 4 (lower is better) Translates to: YSWCLPPVVSMTTKASCLLKACL*RYGRRT Trigger: CGTCCTCCTTCCATAACGTCACAAACAAGCCTTCAG...CAAACAACTAGCTTTTGTAGTCATAGAAACAACTGGTGGTAGGCACCAGGAATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052332.15 ENSMUST00000188618.7 ENSMUST00000189980.7 |
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| CDS-3UTR TCA 90 bp | GGCAATGAGCATCCAATGTCACAGATTCTGCAGGAAGAGAAATCCAAGGGTGTAACTCCGAATAATGCATaGTGGACTCAACATAGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: GNEHPMSQILQEEKSKGVTPNNA*WTQHSS Trigger: GGAACTATGTTGAGTCCATCATGCATTATTCGGAGT...TACACCCTTGGATTTCTCTTCCTGCAGAATCTGTGACATTGGATGCTCATTGCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000052332.15 ENSMUST00000185788.7 ENSMUST00000189980.7 ENSMUST00000190158.2 |
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| CDS-3UTR TCA 90 bp | TTGTATGCTTCATTCATTTCACTGGGAGGAAATTCCCAGGGCCTCAAGCTAATCCCCATTAAAGGTAACTaGGGAGTTACCTGTAGGATG | + |
|
Preference number: 4 (lower is better) Translates to: LYASFISLGGNSQGLKLIPIKGN*GVTCRM Trigger: CATCCTACAGGTAACTCCTCAGTTACCTTTAATGGG...GATTAGCTTGAGGCCCTGGGAATTTCCTCCCAGTGAAATGAATGAAGCATACAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000186097.7 ENSMUST00000187709.7 ENSMUST00000190158.2 |
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| CDS-3UTR TCA 90 bp | TGCTTCATTCATTTCACTGGGAGGAAATTCCCAGGGCCTCAAGCTAATCTGGGATGGAGGTGGTGTATCTaGAATATTTTCTTGGACTCT | + |
|
Preference number: 4 (lower is better) Translates to: CFIHFTGRKFPGPQANLGWRWCI*NIFLDS Trigger: AGAGTCCAAGAAAATATTTCAGATACACCACCTCCA...TCCCAGATTAGCTTGAGGCCCTGGGAATTTCCTCCCAGTGAAATGAATGAAGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000186097.7 ENSMUST00000187709.7 |
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| CDS-3UTR GCA 90 bp | AGCAAGAAGATCCACTTGTTCAGACTTGGCTTTCAGTTTTTGATACAAGGGGATTCTTCTAGGGCTCGCTaGTTATCTGGTGACTGGATG | + |
|
Preference number: 4 (lower is better) Translates to: SKKIHLFRLGFQFLIQGDSSRAR*LSGDWM Trigger: CATCCAGTCACCAGATAAGCAGCGAGCCCTAGAAGA...ATCCCCTTGTATCAAAAACTGAAAGCCAAGTCTGAACAAGTGGATCTTCTTGCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000052332.15 ENSMUST00000187709.7 ENSMUST00000189980.7 |
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| CDS-3UTR GCA 90 bp | GAGAAATGGTCACATTTTCAATCTAGACAGCATAATGCAAATGACAGCAAGAAGGTCCTCACAGGGCTCTaGTGCGAGGGAGCCATATTA | + |
|
Preference number: 4 (lower is better) Translates to: EKWSHFQSRQHNANDSKKVLTGL*CEGAIL Trigger: TAATATGGCTCCCTCGCAGCAGAGCCCTGTGAGGAC...CTTCTTGCTGTCATTTGCATTATGCTGTCTAGATTGAAAATGTGACCATTTCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052332.15 ENSMUST00000187709.7 ENSMUST00000189980.7 |
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| CDS-3UTR GCA 90 bp | ACAAACAAAACCTACAACCTTAAAGCAAAAGAGGTCTTGAGAAGAACACTGTCTGTCCTCACAGGGCTCTaGTGCGAGGGAGCCATATTA | + |
|
Preference number: 4 (lower is better) Translates to: TNKTYNLKAKEVLRRTLSVLTGL*CEGAIL Trigger: TAATATGGCTCCCTCGCAGCAGAGCCCTGTGAGGAC...AGACAGTGTTCTTCTCAAGACCTCTTTTGCTTTAAGGTTGTAGGTTTTGTTTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000052332.15 ENSMUST00000188618.7 ENSMUST00000189980.7 |
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| CDS-3UTR CCA 90 bp | AGCAAGAAGATCCACTTGTTCAGACTTGGCTTTCAGTTTTTGATACAAGGGGATCCGCTCAAGGTTGGCTaGCGCAATAATCTTATGGGT | + |
|
Preference number: 4 (lower is better) Translates to: SKKIHLFRLGFQFLIQGDPLKVG*RNNLMG Trigger: ACCCATAAGATTATTGCGCCAGCCAACCTTGAGCGG...ATCCCCTTGTATCAAAAACTGAAAGCCAAGTCTGAACAAGTGGATCTTCTTGCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000052332.15 ENSMUST00000185788.7 ENSMUST00000187709.7 ENSMUST00000189980.7 |
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| CDS-3UTR CCA 90 bp | AGCATAATGCAAATGACAGCAAGAAGATCCACTTGTTCAGACTTGGCTTTCAGTTCGAATATAACGAACTaGCCGCTCAAGGTTGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: SIMQMTARRSTCSDLAFSSNITN*PLKVGW Trigger: CCAGCCAACCTTGAGCGGCCAGTTCGTTATATTCGA...ACTGAAAGCCAAGTCTGAACAAGTGGATCTTCTTGCTGTCATTTGCATTATGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000052332.15 ENSMUST00000185788.7 ENSMUST00000187709.7 ENSMUST00000189980.7 |
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| CDS-3UTR CCA 90 bp | CTAGACAGCATAATGCAAATGACAGCAAGAAGATCCACTTGTTCAGACTTGGCTAGGTACGTAATCATTTaGTACCACTGGAGGACGCAC | + |
|
Preference number: 4 (lower is better) Translates to: LDSIMQMTARRSTCSDLARYVII*YHWRTH Trigger: GTGCGTCCTCCAGTGGTACCAAATGATTACGTACCT...AGCCAAGTCTGAACAAGTGGATCTTCTTGCTGTCATTTGCATTATGCTGTCTAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052332.15 ENSMUST00000187709.7 ENSMUST00000189980.7 |
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| CDS-3UTR CCA 90 bp | AATCTAGACAGCATAATGCAAATGACAGCAAGAAGATCCACTTGTTCAGACTTGGGATTCATCAAAGACTaGCTCTTCCACAGGTGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: NLDSIMQMTARRSTCSDLGFIKD*LFHRWG Trigger: CCCCCACCTGTGGAAGAGCCAGTCTTTGATGAATCC...CAAGTCTGAACAAGTGGATCTTCTTGCTGTCATTTGCATTATGCTGTCTAGATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000052332.15 ENSMUST00000185788.7 ENSMUST00000187709.7 ENSMUST00000189980.7 ENSMUST00000190158.2 |
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| CDS-3UTR CCA 90 bp | TTCATTTCACTGGGAGGAAATTCCCAGGGCCTCAAGCTAATCTGGGAAGACCTGAGGAGCAAGAGATACTaGATTCTGGTTATAAAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: FISLGGNSQGLKLIWEDLRSKRY*ILVIKR Trigger: CCTTTTTATAACCAGAATCCAGTATCTCTTGCTCCT...CAGGTCTTCCCAGATTAGCTTGAGGCCCTGGGAATTTCCTCCCAGTGAAATGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000186097.7 ENSMUST00000187709.7 ENSMUST00000190158.2 |
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| CDS-3UTR CCA 90 bp | TTCATTTCACTGGGAGGAAATTCCCAGGGCCTCAAGCTAATCTGGGAAGACCTGTATTTTCTTGGACTCTaGCCACAAATCCCATTAAAG | + |
|
Preference number: 4 (lower is better) Translates to: FISLGGNSQGLKLIWEDLYFLGL*PQIPLK Trigger: CTTTAATGGGATTTGTGGCCAGAGTCCAAGAAAATA...CAGGTCTTCCCAGATTAGCTTGAGGCCCTGGGAATTTCCTCCCAGTGAAATGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000186097.7 ENSMUST00000187709.7 ENSMUST00000190158.2 |
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| CDS-3UTR CCA 90 bp | TGCTTCATTCATTTCACTGGGAGGAAATTCCCAGGGCCTCAAGCTAATCTGGGATCTGAAATATTTTCTTaGACTCTGGCCACAAATCCC | + |
|
Preference number: 4 (lower is better) Translates to: CFIHFTGRKFPGPQANLGSEIFS*TLATNP Trigger: GGGATTTGTGGCCAGAGTCCAAGAAAATATTTCAGA...TCCCAGATTAGCTTGAGGCCCTGGGAATTTCCTCCCAGTGAAATGAATGAAGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000186097.7 ENSMUST00000187709.7 |
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| CDS-3UTR TCA 90 bp | CAATCTAGACAGCATAATGCAAATGACAGCAAGAAGATCCACTTGTTCAGACTTCTGAAGGCTTGTTTGTaGCGTTATGGAAGGAGGACG | + |
|
Preference number: 4 (lower is better) Translates to: QSRQHNANDSKKIHLFRLLKACL*RYGRRT Trigger: CGTCCTCCTTCCATAACGTCACAAACAAGCCTTCAG...AAGTCTGAACAAGTGGATCTTCTTGCTGTCATTTGCATTATGCTGTCTAGATTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000052332.15 ENSMUST00000185788.7 ENSMUST00000187709.7 ENSMUST00000189980.7 ENSMUST00000190158.2 |
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| CDS-3UTR TCA 90 bp | CTAGACAGCATAATGCAAATGACAGCAAGAAGATCCACTTGTTCAGACTTGGCTCCCATTAAAGGTAACTaGGGAGTTACCTGTAGGATG | + |
|
Preference number: 4 (lower is better) Translates to: LDSIMQMTARRSTCSDLAPIKGN*GVTCRM Trigger: CATCCTACAGGTAACTCCTCAGTTACCTTTAATGGG...AGCCAAGTCTGAACAAGTGGATCTTCTTGCTGTCATTTGCATTATGCTGTCTAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000187709.7 ENSMUST00000190158.2 |
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| CDS-3UTR CCA 90 bp | TGCTTCATTCATTTCACTGGGAGGAAATTCCCAGGGCCTCAAGCTAATCTGGGAGGCGCAATAATCTTATaGGTCCTTGAAGTGTTTTTA | + |
|
Preference number: 4 (lower is better) Translates to: CFIHFTGRKFPGPQANLGGAIIL*VLEVFL Trigger: TAAAAACACTTCAAGGACCCATAAGATTATTGCGCC...TCCCAGATTAGCTTGAGGCCCTGGGAATTTCCTCCCAGTGAAATGAATGAAGCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000052332.15 ENSMUST00000185788.7 ENSMUST00000187709.7 ENSMUST00000188594.7 ENSMUST00000189980.7 |
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| CDS-3UTR CCA 90 bp | GTTAAACGTTCATATACAGTCTTGCTTGGGTCCATAATGGAACTAAAGGTTCAGCCGCTCAAGGTTGGCTaGCGCAATAATCTTATGGGT | + |
|
Preference number: 4 (lower is better) Translates to: VKRSYTVLLGSIMELKVQPLKVG*RNNLMG Trigger: ACCCATAAGATTATTGCGCCAGCCAACCTTGAGCGG...CTGAACCTTTAGTTCCATTATGGACCCAAGCAAGACTGTATATGAACGTTTAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052332.15 ENSMUST00000188618.7 ENSMUST00000189980.7 |
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| CDS-3UTR CCA 90 bp | TTGTATGCTTCATTCATTTCACTGGGAGGAAATTCCCAGGGCCTCAAGCTAATCCCCATTTTCATATTCTaGGTACTCACCTTCACTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LYASFISLGGNSQGLKLIPIFIF*VLTFTP Trigger: TGGAGTGAAGGTGAGTACCCAGAATATGAAAATGGG...GATTAGCTTGAGGCCCTGGGAATTTCCTCCCAGTGAAATGAATGAAGCATACAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000052332.15 ENSMUST00000187709.7 ENSMUST00000188594.7 |
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| CDS-3UTR CCA 90 bp | GTTCATGTTGGTATGCCTTTCATGATTGAGAAATGGTCACATTTTCAATCTAGATGGGGGCTTCTGAGTTaGAGGTGTCGTACGTGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: VHVGMPFMIEKWSHFQSRWGLLS*RCRTWQ Trigger: TTGCCACGTACGACACCTCCAACTCAGAAGCCCCCA...TCTAGATTGAAAATGTGACCATTTCTCAATCATGAAAGGCATACCAACATGAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000052332.15 ENSMUST00000185788.7 ENSMUST00000189980.7 ENSMUST00000190158.2 |
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| CDS-3UTR CCA 90 bp | TATTCCTGGTGCCTACCACCAGTTGTTTCTATGACTACAAAAGCTAGTTGTTTGAGGTACGTAATCATTTaGTACCACTGGAGGACGCAC | + |
|
Preference number: 4 (lower is better) Translates to: YSWCLPPVVSMTTKASCLRYVII*YHWRTH Trigger: GTGCGTCCTCCAGTGGTACCAAATGATTACGTACCT...CAAACAACTAGCTTTTGTAGTCATAGAAACAACTGGTGGTAGGCACCAGGAATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052332.15 ENSMUST00000188618.7 ENSMUST00000189980.7 |
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| CDS-3UTR CCA 90 bp | CAAGTATTTTATTCTATTAGTCTTCTCCAGCACACTCTTCACTCTGAATCACAAACCTGGAAAGACGCTTaGAGGAGACGGAGTAGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: QVFYSISLLQHTLHSESQTWKDA*RRRSRH Trigger: GTGCCTACTCCGTCTCCTCCAAGCGTCTTTCCAGGT...TTGTGATTCAGAGTGAAGAGTGTGCTGGAGAAGACTAATAGAATAAAATACTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052332.15 |
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| CDS-3UTR CCA 90 bp | ATCAGAGTTAAACGTTCATATACAGTCTTGCTTGGGTCCATAATGGAACTAAAGGGATTCATCAAAGACTaGCTCTTCCACAGGTGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: IRVKRSYTVLLGSIMELKGFIKD*LFHRWG Trigger: CCCCCACCTGTGGAAGAGCCAGTCTTTGATGAATCC...CTTTAGTTCCATTATGGACCCAAGCAAGACTGTATATGAACGTTTAACTCTGAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052332.15 ENSMUST00000188618.7 ENSMUST00000189980.7 |
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| CDS-3UTR CCA 90 bp | ATCCCAGATATTTTTCCTCAAGTCAGTCTTGGTCTTACATGTTTTAGCTACATGGGATTCATCAAAGACTaGCTCTTCCACAGGTGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: IPDIFPQVSLGLTCFSYMGFIKD*LFHRWG Trigger: CCCCCACCTGTGGAAGAGCCAGTCTTTGATGAATCC...CATGTAGCTAAAACATGTAAGACCAAGACTGACTTGAGGAAAAATATCTGGGAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000052332.15 ENSMUST00000185788.7 ENSMUST00000189980.7 ENSMUST00000190158.2 |
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| 3UTR CAA 72 bp | AGATTGAAAATGACTTGGCATCAGCTAACACTGCCATaGATAATGGTCCAAGAGCATGGTAGCAGCCTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: RLKMTWHQLTLP*IMVQEHGSSLS Trigger: TGAAAGGCTGCTACCATGCTCTTGGACCATTATCAATGGCAGTGTTAGCTGATGCCAAGTCATTTTCAATCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052332.15 ENSMUST00000189980.7 |
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| CDS-3UTR TCA 90 bp | AAGAAGATCCACTTGTTCAGACTTGGCTTTCAGTTTTTGATACAAGGGGATAAACTGAAGGCTTGTTTGTaGCGTTATGGAAGGAGGACG | + |
|
Preference number: 4 (lower is better) Translates to: KKIHLFRLGFQFLIQGDKLKACL*RYGRRT Trigger: CGTCCTCCTTCCATAACGTCACAAACAAGCCTTCAG...TTTATCCCCTTGTATCAAAAACTGAAAGCCAAGTCTGAACAAGTGGATCTTCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000052332.15 ENSMUST00000185788.7 ENSMUST00000187709.7 ENSMUST00000189980.7 ENSMUST00000190158.2 |
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| CDS-3UTR TCA 90 bp | GAGAAATGGTCACATTTTCAATCTAGACAGCATAATGCAAATGACAGCAAGAAGCTGAAGGCTTGTTTGTaGCGTTATGGAAGGAGGACG | + |
|
Preference number: 4 (lower is better) Translates to: EKWSHFQSRQHNANDSKKLKACL*RYGRRT Trigger: CGTCCTCCTTCCATAACGTCACAAACAAGCCTTCAG...CTTCTTGCTGTCATTTGCATTATGCTGTCTAGATTGAAAATGTGACCATTTCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000052332.15 ENSMUST00000185788.7 ENSMUST00000187709.7 ENSMUST00000189980.7 ENSMUST00000190158.2 |
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| CDS-3UTR TCA 90 bp | AGCATAATGCAAATGACAGCAAGAAGATCCACTTGTTCAGACTTGGCTTTCAGTCCCATTAAAGGTAACTaGGGAGTTACCTGTAGGATG | + |
|
Preference number: 4 (lower is better) Translates to: SIMQMTARRSTCSDLAFSPIKGN*GVTCRM Trigger: CATCCTACAGGTAACTCCTCAGTTACCTTTAATGGG...ACTGAAAGCCAAGTCTGAACAAGTGGATCTTCTTGCTGTCATTTGCATTATGCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000187709.7 ENSMUST00000190158.2 |
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| CDS-3UTR GCA 90 bp | AACACAGGGTTTACAGTGTTAAAGAAGGAAAACAGCCTTAAGCAATCAAAAAGCTCTTCTAGGGCTCGCTaGTTATCTGGTGACTGGATG | + |
|
Preference number: 4 (lower is better) Translates to: NTGFTVLKKENSLKQSKSSSRAR*LSGDWM Trigger: CATCCAGTCACCAGATAAGCAGCGAGCCCTAGAAGA...GCTTTTTGATTGCTTAAGGCTGTTTTCCTTCTTTAACACTGTAAACCCTGTGTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000052332.15 ENSMUST00000189980.7 |
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| CDS-3UTR GCA 90 bp | AGTAAACAGCTCCCATTCATTTCAAAGATTTGGAAGTCTACCAACCATTTCTTCTCTTCTAGGGCTCGCTaGTTATCTGGTGACTGGATG | + |
|
Preference number: 4 (lower is better) Translates to: SKQLPFISKIWKSTNHFFSSRAR*LSGDWM Trigger: CATCCAGTCACCAGATAAGCAGCGAGCCCTAGAAGA...GAAGAAATGGTTGGTAGACTTCCAAATCTTTGAAATGAATGGGAGCTGTTTACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052332.15 ENSMUST00000188618.7 |
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| CDS-3UTR CCA 90 bp | AAGAAGATCCACTTGTTCAGACTTGGCTTTCAGTTTTTGATACAAGGGGATAAAGAGTGGTGTAGGCTTTaGTTTCTTCTAGGGCTCGCT | + |
|
Preference number: 4 (lower is better) Translates to: KKIHLFRLGFQFLIQGDKEWCRL*FLLGLA Trigger: AGCGAGCCCTAGAAGAAACCAAAGCCTACACCACTC...TTTATCCCCTTGTATCAAAAACTGAAAGCCAAGTCTGAACAAGTGGATCTTCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000052332.15 ENSMUST00000187709.7 ENSMUST00000189980.7 |
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| CDS-3UTR CCA 90 bp | GTACAAGGCCTGCATCTGGATTACAACAGCTTTACTTCCTCTTCGGTAGATGAGGGCGCAATAATCTTATaGGTCCTTGAAGTGTTTTTA | + |
|
Preference number: 4 (lower is better) Translates to: VQGLHLDYNSFTSSSVDEGAIIL*VLEVFL Trigger: TAAAAACACTTCAAGGACCCATAAGATTATTGCGCC...CTCATCTACCGAAGAGGAAGTAAAGCTGTTGTAATCCAGATGCAGGCCTTGTAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000052332.15 ENSMUST00000188618.7 ENSMUST00000189980.7 |
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| CDS-3UTR CCA 90 bp | AACACAGGGTTTACAGTGTTAAAGAAGGAAAACAGCCTTAAGCAATCAAAAAGCTCGAATATAACGAACTaGCCGCTCAAGGTTGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: NTGFTVLKKENSLKQSKSSNITN*PLKVGW Trigger: CCAGCCAACCTTGAGCGGCCAGTTCGTTATATTCGA...GCTTTTTGATTGCTTAAGGCTGTTTTCCTTCTTTAACACTGTAAACCCTGTGTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000052332.15 ENSMUST00000185788.7 ENSMUST00000189980.7 |
||
| CDS-3UTR CCA 90 bp | GTGCTCCATTCTGTTCCTGCCAGCATAGAACTAAATACAATGCATTCTTGCTACAGCCATATTACGGGTTaGGCTAGGTACGTAATCATT | + |
|
Preference number: 4 (lower is better) Translates to: VLHSVPASIELNTMHSCYSHITG*ARYVII Trigger: AATGATTACGTACCTAGCCCAACCCGTAATATGGCT...GTAGCAAGAATGCATTGTATTTAGTTCTATGCTGGCAGGAACAGAATGGAGCAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052332.15 ENSMUST00000188618.7 |
||
| CDS-3UTR CCA 90 bp | GTTCATGTTGGTATGCCTTTCATGATTGAGAAATGGTCACATTTTCAATCTAGAGGATTCATCAAAGACTaGCTCTTCCACAGGTGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: VHVGMPFMIEKWSHFQSRGFIKD*LFHRWG Trigger: CCCCCACCTGTGGAAGAGCCAGTCTTTGATGAATCC...TCTAGATTGAAAATGTGACCATTTCTCAATCATGAAAGGCATACCAACATGAAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000052332.15 ENSMUST00000185788.7 ENSMUST00000189980.7 ENSMUST00000190158.2 |
||
| CDS-3UTR CCA 90 bp | CATAATGCAAATGACAGCAAGAAGATCCACTTGTTCAGACTTGGCTTTCAGTTTAGGTGGGGGTGGAGGTaGTGTATTATTTTCTTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: HNANDSKKIHLFRLGFQFRWGWR*CIIFLD Trigger: GTCCAAGAAAATAATACACCACCTCCACCCCCACCT...AAACTGAAAGCCAAGTCTGAACAAGTGGATCTTCTTGCTGTCATTTGCATTATG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000190158.2 |
||
| CDS-3UTR CCA 90 bp | AATCTAGACAGCATAATGCAAATGACAGCAAGAAGATCCACTTGTTCAGACTTGTTCCACAGGTGGGGGTaGAGGTGGTGTATTATTTTC | + |
|
Preference number: 4 (lower is better) Translates to: NLDSIMQMTARRSTCSDLFHRWG*RWCIIF Trigger: GAAAATAATACACCACCTCCACCCCCACCTGTGGAA...CAAGTCTGAACAAGTGGATCTTCTTGCTGTCATTTGCATTATGCTGTCTAGATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000190158.2 |
||
| CDS-3UTR TCA 90 bp | TTGTATGCTTCATTCATTTCACTGGGAGGAAATTCCCAGGGCCTCAAGCTAATCAATCTTATGGGTCCTTaGAGTGTTTTTATTGGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: LYASFISLGGNSQGLKLINLMGP*SVFIGG Trigger: ACCACCAATAAAAACACTTCAAGGACCCATAAGATT...GATTAGCTTGAGGCCCTGGGAATTTCCTCCCAGTGAAATGAATGAAGCATACAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000052332.15 ENSMUST00000185788.7 ENSMUST00000187709.7 ENSMUST00000188594.7 ENSMUST00000189980.7 |
||
| CDS-3UTR TCA 90 bp | CATGTTCTCCATGAGGAGAAAAGAGTAAAGCAAGCTGTACTGCAGAAAGGTGACAATCTTATGGGTCCTTaGAGTGTTTTTATTGGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: HVLHEEKRVKQAVLQKGDNLMGP*SVFIGG Trigger: ACCACCAATAAAAACACTTCAAGGACCCATAAGATT...GTCACCTTTCTGCAGTACAGCTTGCTTTACTCTTTTCTCCTCATGGAGAACATG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000052332.15 ENSMUST00000188618.7 |
||
| CDS-3UTR TCA 90 bp | AGCATAATGCAAATGACAGCAAGAAGATCCACTTGTTCAGACTTGGCTTTCAGTACTCCGAATAATGCATaGTGGACTCAACATAGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: SIMQMTARRSTCSDLAFSTPNNA*WTQHSS Trigger: GGAACTATGTTGAGTCCATCATGCATTATTCGGAGT...ACTGAAAGCCAAGTCTGAACAAGTGGATCTTCTTGCTGTCATTTGCATTATGCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000052332.15 ENSMUST00000185788.7 ENSMUST00000187709.7 ENSMUST00000189980.7 ENSMUST00000190158.2 |
||
| CDS-3UTR CCA 90 bp | CTAGACAGCATAATGCAAATGACAGCAAGAAGATCCACTTGTTCAGACTTGGCTTCTGTAGGACATTGTTaGCCAAGGTGTTTATCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: LDSIMQMTARRSTCSDLASVGHC*PRCLSD Trigger: ATCTGATAAACACCTTGGCCAACAATGTCCTACAGA...AGCCAAGTCTGAACAAGTGGATCTTCTTGCTGTCATTTGCATTATGCTGTCTAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052332.15 ENSMUST00000187709.7 ENSMUST00000189980.7 |
||
| CDS-3UTR CCA 90 bp | GTGCTCCATTCTGTTCCTGCCAGCATAGAACTAAATACAATGCATTCTTGCTACTCTGTAGGACATTGTTaGCCAAGGTGTTTATCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: VLHSVPASIELNTMHSCYSVGHC*PRCLSD Trigger: ATCTGATAAACACCTTGGCCAACAATGTCCTACAGA...GTAGCAAGAATGCATTGTATTTAGTTCTATGCTGGCAGGAACAGAATGGAGCAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052332.15 ENSMUST00000188618.7 |
||
| CDS-3UTR CCA 90 bp | TTGTATGCTTCATTCATTTCACTGGGAGGAAATTCCCAGGGCCTCAAGCTAATCGGCGCAATAATCTTATaGGTCCTTGAAGTGTTTTTA | + |
|
Preference number: 4 (lower is better) Translates to: LYASFISLGGNSQGLKLIGAIIL*VLEVFL Trigger: TAAAAACACTTCAAGGACCCATAAGATTATTGCGCC...GATTAGCTTGAGGCCCTGGGAATTTCCTCCCAGTGAAATGAATGAAGCATACAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000052332.15 ENSMUST00000185788.7 ENSMUST00000187709.7 ENSMUST00000188594.7 ENSMUST00000189980.7 |
||
| CDS-3UTR CCA 90 bp | CAAGTATTTTATTCTATTAGTCTTCTCCAGCACACTCTTCACTCTGAATCACAACCGCTCAAGGTTGGCTaGCGCAATAATCTTATGGGT | + |
|
Preference number: 4 (lower is better) Translates to: QVFYSISLLQHTLHSESQPLKVG*RNNLMG Trigger: ACCCATAAGATTATTGCGCCAGCCAACCTTGAGCGG...TTGTGATTCAGAGTGAAGAGTGTGCTGGAGAAGACTAATAGAATAAAATACTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052332.15 ENSMUST00000189980.7 |
||
| CDS-3UTR CCA 90 bp | CAAGTATTTTATTCTATTAGTCTTCTCCAGCACACTCTTCACTCTGAATCACAATCGAATATAACGAACTaGCCGCTCAAGGTTGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: QVFYSISLLQHTLHSESQSNITN*PLKVGW Trigger: CCAGCCAACCTTGAGCGGCCAGTTCGTTATATTCGA...TTGTGATTCAGAGTGAAGAGTGTGCTGGAGAAGACTAATAGAATAAAATACTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052332.15 ENSMUST00000189980.7 |
||
| CDS-3UTR CCA 90 bp | AAGAAGATCCACTTGTTCAGACTTGGCTTTCAGTTTTTGATACAAGGGGATAAAAGGTACGTAATCATTTaGTACCACTGGAGGACGCAC | + |
|
Preference number: 4 (lower is better) Translates to: KKIHLFRLGFQFLIQGDKRYVII*YHWRTH Trigger: GTGCGTCCTCCAGTGGTACCAAATGATTACGTACCT...TTTATCCCCTTGTATCAAAAACTGAAAGCCAAGTCTGAACAAGTGGATCTTCTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000052332.15 ENSMUST00000187709.7 ENSMUST00000189980.7 |
||
| CDS-3UTR CCA 90 bp | TTGTATGCTTCATTCATTTCACTGGGAGGAAATTCCCAGGGCCTCAAGCTAATCAGGAGCAAGAGATACTaGATTCTGGTTATAAAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: LYASFISLGGNSQGLKLIRSKRY*ILVIKR Trigger: CCTTTTTATAACCAGAATCCAGTATCTCTTGCTCCT...GATTAGCTTGAGGCCCTGGGAATTTCCTCCCAGTGAAATGAATGAAGCATACAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000186097.7 ENSMUST00000187709.7 ENSMUST00000190158.2 |
||
| CDS-3UTR CCA 90 bp | TTGTATGCTTCATTCATTTCACTGGGAGGAAATTCCCAGGGCCTCAAGCTAATCTATTTTCTTGGACTCTaGCCACAAATCCCATTAAAG | + |
|
Preference number: 4 (lower is better) Translates to: LYASFISLGGNSQGLKLIYFLGL*PQIPLK Trigger: CTTTAATGGGATTTGTGGCCAGAGTCCAAGAAAATA...GATTAGCTTGAGGCCCTGGGAATTTCCTCCCAGTGAAATGAATGAAGCATACAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000186097.7 ENSMUST00000187709.7 ENSMUST00000190158.2 |
||
| CDS-3UTR TCA 90 bp | CATAATGCAAATGACAGCAAGAAGATCCACTTGTTCAGACTTGGCTTTCAGTTTACTCCGAATAATGCATaGTGGACTCAACATAGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: HNANDSKKIHLFRLGFQFTPNNA*WTQHSS Trigger: GGAACTATGTTGAGTCCATCATGCATTATTCGGAGT...AAACTGAAAGCCAAGTCTGAACAAGTGGATCTTCTTGCTGTCATTTGCATTATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000052332.15 ENSMUST00000185788.7 ENSMUST00000187709.7 ENSMUST00000189980.7 ENSMUST00000190158.2 |
||
| CDS-3UTR TCA 90 bp | AGCAAGAAGATCCACTTGTTCAGACTTGGCTTTCAGTTTTTGATACAAGGGGATTGGAGGTGGTGTATCTaGAATATTTTCTTGGACTCT | + |
|
Preference number: 4 (lower is better) Translates to: SKKIHLFRLGFQFLIQGDWRWCI*NIFLDS Trigger: AGAGTCCAAGAAAATATTTCAGATACACCACCTCCA...ATCCCCTTGTATCAAAAACTGAAAGCCAAGTCTGAACAAGTGGATCTTCTTGCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000187709.7 |
||
| CDS-3UTR CCA 90 bp | TTGTATGCTTCATTCATTTCACTGGGAGGAAATTCCCAGGGCCTCAAGCTAATCCCCATTTTCATATTCTaGGTACTCACCTTAAATCTA | + |
|
Preference number: 4 (lower is better) Translates to: LYASFISLGGNSQGLKLIPIFIF*VLTLNL Trigger: TAGATTTAAGGTGAGTACCCAGAATATGAAAATGGG...GATTAGCTTGAGGCCCTGGGAATTTCCTCCCAGTGAAATGAATGAAGCATACAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000185788.7 ENSMUST00000186097.7 ENSMUST00000189980.7 ENSMUST00000190158.2 |
||
| CDS-3UTR CCA 90 bp | GTCACAGATTCTGCAGGAAGAGAAATCCAAGGGTGTACAGTATTCCTGAGAAAGCCCATTTTCATATTCTaGGTACTCACCTTAAATCTA | + |
|
Preference number: 4 (lower is better) Translates to: VTDSAGREIQGCTVFLRKPIFIF*VLTLNL Trigger: TAGATTTAAGGTGAGTACCCAGAATATGAAAATGGG...CTTTCTCAGGAATACTGTACACCCTTGGATTTCTCTTCCTGCAGAATCTGTGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000185788.7 ENSMUST00000189980.7 ENSMUST00000190158.2 |
||
| CDS-3UTR CCA 90 bp | CAATCTAGACAGCATAATGCAAATGACAGCAAGAAGATCCACTTGTTCAGACTTGGTGTATTATTTTCTTaGACTCTGGCCACAAATCCC | + |
|
Preference number: 4 (lower is better) Translates to: QSRQHNANDSKKIHLFRLGVLFS*TLATNP Trigger: GGGATTTGTGGCCAGAGTCCAAGAAAATAATACACC...AAGTCTGAACAAGTGGATCTTCTTGCTGTCATTTGCATTATGCTGTCTAGATTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190158.2 |
||
| 3UTR CAA 72 bp | AGACAGCATAATGCAAATGACAGCAAGAAGATCCACTaGTTCAGACTTGGCTTTCAGTTTTTGATACAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: RQHNANDSKKIH*FRLGFQFLIQG Trigger: CCCTTGTATCAAAAACTGAAAGCCAAGTCTGAACAAGTGGATCTTCTTGCTGTCATTTGCATTATGCTGTCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000052332.15 ENSMUST00000185788.7 ENSMUST00000187709.7 ENSMUST00000189980.7 ENSMUST00000190158.2 |
||
| CDS-3UTR TCA 90 bp | GAAAGATCCCAGATATTTTTCCTCAAGTCAGTCTTGGTCTTACATGTTTTAGCTACTCCGAATAATGCATaGTGGACTCAACATAGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: ERSQIFFLKSVLVLHVLATPNNA*WTQHSS Trigger: GGAACTATGTTGAGTCCATCATGCATTATTCGGAGT...AGCTAAAACATGTAAGACCAAGACTGACTTGAGGAAAAATATCTGGGATCTTTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000052332.15 ENSMUST00000185788.7 ENSMUST00000189980.7 ENSMUST00000190158.2 |
||
| CDS-3UTR CCA 90 bp | TATTCCTGGTGCCTACCACCAGTTGTTTCTATGACTACAAAAGCTAGTTGTTTGGGCGCAATAATCTTATaGGTCCTTGAAGTGTTTTTA | + |
|
Preference number: 4 (lower is better) Translates to: YSWCLPPVVSMTTKASCLGAIIL*VLEVFL Trigger: TAAAAACACTTCAAGGACCCATAAGATTATTGCGCC...CAAACAACTAGCTTTTGTAGTCATAGAAACAACTGGTGGTAGGCACCAGGAATA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000052332.15 ENSMUST00000188618.7 ENSMUST00000189980.7 |
||
| CDS-3UTR CCA 90 bp | GAGAAATGGTCACATTTTCAATCTAGACAGCATAATGCAAATGACAGCAAGAAGAGCCATATTACGGGTTaGGCTAGGTACGTAATCATT | + |
|
Preference number: 4 (lower is better) Translates to: EKWSHFQSRQHNANDSKKSHITG*ARYVII Trigger: AATGATTACGTACCTAGCCCAACCCGTAATATGGCT...CTTCTTGCTGTCATTTGCATTATGCTGTCTAGATTGAAAATGTGACCATTTCTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052332.15 ENSMUST00000187709.7 ENSMUST00000189980.7 |
||
| CDS-3UTR CCA 90 bp | AGTAAACAGCTCCCATTCATTTCAAAGATTTGGAAGTCTACCAACCATTTCTTCAGCCATATTACGGGTTaGGCTAGGTACGTAATCATT | + |
|
Preference number: 4 (lower is better) Translates to: SKQLPFISKIWKSTNHFFSHITG*ARYVII Trigger: AATGATTACGTACCTAGCCCAACCCGTAATATGGCT...GAAGAAATGGTTGGTAGACTTCCAAATCTTTGAAATGAATGGGAGCTGTTTACT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052332.15 ENSMUST00000188618.7 |
||
| CDS-3UTR CCA 90 bp | GTTGTGCTCCATTCTGTTCCTGCCAGCATAGAACTAAATACAATGCATTCTTGCCCCATTTTCATATTCTaGGTACTCACCTTAAATCTA | + |
|
Preference number: 4 (lower is better) Translates to: VVLHSVPASIELNTMHSCPIFIF*VLTLNL Trigger: TAGATTTAAGGTGAGTACCCAGAATATGAAAATGGG...GCAAGAATGCATTGTATTTAGTTCTATGCTGGCAGGAACAGAATGGAGCACAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000188618.7 |
||
| CDS-3UTR CCA 90 bp | CAATCTAGACAGCATAATGCAAATGACAGCAAGAAGATCCACTTGTTCAGACTTTCTGAAATATTTTCTTaGACTCTGGCCACAAATCCC | + |
|
Preference number: 4 (lower is better) Translates to: QSRQHNANDSKKIHLFRLSEIFS*TLATNP Trigger: GGGATTTGTGGCCAGAGTCCAAGAAAATATTTCAGA...AAGTCTGAACAAGTGGATCTTCTTGCTGTCATTTGCATTATGCTGTCTAGATTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187709.7 |
||
| 3UTR CAA 72 bp | ACCAATACAATCAGAGTTAAACGTTCATATACAGTCTaGCTTGGGTCCATAATGGAACTAAAGGTTCAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: TNTIRVKRSYTV*LGSIMELKVQR Trigger: CCTCTGAACCTTTAGTTCCATTATGGACCCAAGCAAGACTGTATATGAACGTTTAACTCTGATTGTATTGGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052332.15 ENSMUST00000188618.7 ENSMUST00000189980.7 |
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| CDS-3UTR TCA 90 bp | TATTTAAACACTGGTTCCTTTCCTCTCCATATACTGAAAGTAAAGGGCAAGGGTAATCTTATGGGTCCTTaGAGTGTTTTTATTGGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: YLNTGSFPLHILKVKGKGNLMGP*SVFIGG Trigger: ACCACCAATAAAAACACTTCAAGGACCCATAAGATT...ACCCTTGCCCTTTACTTTCAGTATATGGAGAGGAAAGGAACCAGTGTTTAAATA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000052332.15 ENSMUST00000185788.7 ENSMUST00000189980.7 |
||
| CDS-3UTR CCA 90 bp | GTTGGTATGCCTTTCATGATTGAGAAATGGTCACATTTTCAATCTAGACAGCATTCTGTAGGACATTGTTaGCCAAGGTGTTTATCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: VGMPFMIEKWSHFQSRQHSVGHC*PRCLSD Trigger: ATCTGATAAACACCTTGGCCAACAATGTCCTACAGA...ATGCTGTCTAGATTGAAAATGTGACCATTTCTCAATCATGAAAGGCATACCAAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052332.15 ENSMUST00000189980.7 |
||
| CDS-3UTR CCA 90 bp | ACAAACAAAACCTACAACCTTAAAGCAAAAGAGGTCTTGAGAAGAACACTGTCTTCTGTAGGACATTGTTaGCCAAGGTGTTTATCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: TNKTYNLKAKEVLRRTLSSVGHC*PRCLSD Trigger: ATCTGATAAACACCTTGGCCAACAATGTCCTACAGA...AGACAGTGTTCTTCTCAAGACCTCTTTTGCTTTAAGGTTGTAGGTTTTGTTTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000052332.15 ENSMUST00000188618.7 ENSMUST00000189980.7 |
||
| CDS-3UTR CCA 90 bp | CAAGTATTTTATTCTATTAGTCTTCTCCAGCACACTCTTCACTCTGAATCACAAAGCCATATTACGGGTTaGGCTAGGTACGTAATCATT | + |
|
Preference number: 4 (lower is better) Translates to: QVFYSISLLQHTLHSESQSHITG*ARYVII Trigger: AATGATTACGTACCTAGCCCAACCCGTAATATGGCT...TTGTGATTCAGAGTGAAGAGTGTGCTGGAGAAGACTAATAGAATAAAATACTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052332.15 ENSMUST00000189980.7 |
||
| CDS-3UTR CCA 90 bp | CATAATGCAAATGACAGCAAGAAGATCCACTTGTTCAGACTTGGCTTTCAGTTTTATTTTCTTGGACTCTaGCCACAAATCCCATTAAAG | + |
|
Preference number: 4 (lower is better) Translates to: HNANDSKKIHLFRLGFQFYFLGL*PQIPLK Trigger: CTTTAATGGGATTTGTGGCCAGAGTCCAAGAAAATA...AAACTGAAAGCCAAGTCTGAACAAGTGGATCTTCTTGCTGTCATTTGCATTATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000187709.7 ENSMUST00000190158.2 |
||
| CDS-3UTR TCA 90 bp | AAGAAGATCCACTTGTTCAGACTTGGCTTTCAGTTTTTGATACAAGGGGATAAAAATCTTATGGGTCCTTaGAGTGTTTTTATTGGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: KKIHLFRLGFQFLIQGDKNLMGP*SVFIGG Trigger: ACCACCAATAAAAACACTTCAAGGACCCATAAGATT...TTTATCCCCTTGTATCAAAAACTGAAAGCCAAGTCTGAACAAGTGGATCTTCTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 4 transcripts: ENSMUST00000052332.15 ENSMUST00000185788.7 ENSMUST00000187709.7 ENSMUST00000189980.7 |
||
| CDS-3UTR TCA 90 bp | GAGAAATGGTCACATTTTCAATCTAGACAGCATAATGCAAATGACAGCAAGAAGAATCTTATGGGTCCTTaGAGTGTTTTTATTGGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: EKWSHFQSRQHNANDSKKNLMGP*SVFIGG Trigger: ACCACCAATAAAAACACTTCAAGGACCCATAAGATT...CTTCTTGCTGTCATTTGCATTATGCTGTCTAGATTGAAAATGTGACCATTTCTC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000052332.15 ENSMUST00000185788.7 ENSMUST00000187709.7 ENSMUST00000189980.7 |
||
| CDS-3UTR CCA 90 bp | AACACAGGGTTTACAGTGTTAAAGAAGGAAAACAGCCTTAAGCAATCAAAAAGCGGCGCAATAATCTTATaGGTCCTTGAAGTGTTTTTA | + |
|
Preference number: 4 (lower is better) Translates to: NTGFTVLKKENSLKQSKSGAIIL*VLEVFL Trigger: TAAAAACACTTCAAGGACCCATAAGATTATTGCGCC...GCTTTTTGATTGCTTAAGGCTGTTTTCCTTCTTTAACACTGTAAACCCTGTGTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000052332.15 ENSMUST00000185788.7 ENSMUST00000189980.7 |
||
| CDS-3UTR CCA 90 bp | GAGAAATGGTCACATTTTCAATCTAGACAGCATAATGCAAATGACAGCAAGAAGAGGAGCAAGAGATACTaGATTCTGGTTATAAAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: EKWSHFQSRQHNANDSKKRSKRY*ILVIKR Trigger: CCTTTTTATAACCAGAATCCAGTATCTCTTGCTCCT...CTTCTTGCTGTCATTTGCATTATGCTGTCTAGATTGAAAATGTGACCATTTCTC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000187709.7 ENSMUST00000190158.2 |
||
| CDS-3UTR CCA 90 bp | AACACAGGGTTTACAGTGTTAAAGAAGGAAAACAGCCTTAAGCAATCAAAAAGCCCCATTTTCATATTCTaGGTACTCACCTTAAATCTA | + |
|
Preference number: 4 (lower is better) Translates to: NTGFTVLKKENSLKQSKSPIFIF*VLTLNL Trigger: TAGATTTAAGGTGAGTACCCAGAATATGAAAATGGG...GCTTTTTGATTGCTTAAGGCTGTTTTCCTTCTTTAACACTGTAAACCCTGTGTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000185788.7 ENSMUST00000189980.7 |
||
| 3UTR CAA 72 bp | GAATTAAGTTTTAGAAGGGGTGAATGCAGGTTGCACTaGAATTCCTTTAAGCAATCTGAATACTTTGATGGT | + |
|
Preference number: 4 (lower is better) Translates to: ELSFRRGECRLH*NSFKQSEYFDG Trigger: ACCATCAAAGTATTCAGATTGCTTAAAGGAATTCAAGTGCAACCTGCATTCACCCCTTCTAAAACTTAATTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000052332.15 ENSMUST00000188618.7 |
||
| CDS-3UTR CCA 90 bp | GTTCATGTTGGTATGCCTTTCATGATTGAGAAATGGTCACATTTTCAATCTAGACCCATTTTCATATTCTaGGTACTCACCTTAAATCTA | + |
|
Preference number: 4 (lower is better) Translates to: VHVGMPFMIEKWSHFQSRPIFIF*VLTLNL Trigger: TAGATTTAAGGTGAGTACCCAGAATATGAAAATGGG...TCTAGATTGAAAATGTGACCATTTCTCAATCATGAAAGGCATACCAACATGAAC 34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000185788.7 ENSMUST00000189980.7 ENSMUST00000190158.2 |
||
| CDS-3UTR CAA 90 bp | GGGCGGTGGTGGCGCACGCCTTTAGTCCCAGCACTCGGCAGGCAGAGGCAGGTGTTTCCAAGTAAGCCCTaGGCGCCCACGGTGGGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: GRWWRTPLVPALGRQRQVFPSKP*APTVGP Trigger: AGGACCCACCGTGGGCGCCAAGGGCTTACTTGGAAA...CACCTGCCTCTGCCTGCCGAGTGCTGGGACTAAAGGCGTGCGCCACCACCGCCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052332.15 ENSMUST00000188618.7 ENSMUST00000189980.7 |
||
| CDS-3UTR CAA 90 bp | GTGAGCCGGGCGGTGGTGGCGCACGCCTTTAGTCCCAGCACTCGGCAGGCAGAGTTGGGGGCTTCTGAGTaGGAGGTGTCGTACGTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: VSRAVVAHAFSPSTRQAELGASE*EVSYVA Trigger: TGCCACGTACGACACCTCCAACTCAGAAGCCCCCAA...CTCTGCCTGCCGAGTGCTGGGACTAAAGGCGTGCGCCACCACCGCCCGGCTCAC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000052332.15 ENSMUST00000188618.7 ENSMUST00000189980.7 |
||
| CDS CCA 90 bp | AGTGAAGCCATCAGCAAGGCTCTGTGCACCCCCAGCAGCAGCGTCTaGGGCAGTGGAGGAGGGAACAGTAGCAGGAACAAGAGGGGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: SEAISKALCTPSSSV*GSGGGNSSRNKRGG Trigger: CCCACCCCTCTTGTTCCTGCTACTGTTCCCTCCTCCACTGCCCCAGACGCTGCTGCTGGGGGTGCACAGAGCCTTGCTGATGGCTTCACT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000185788.7 ENSMUST00000186097.7 ENSMUST00000188594.7 ENSMUST00000188618.7 ENSMUST00000190158.2 |
||
| CDS GCA 90 bp | CAATGGGTACCCCCACACTACCACTTCCGCTGTTCTCCCGACTGCTaGTCCGACTACTTGGGTGACTTCCTCCACTGCTCCCACTGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: QWVPPHYHFRCSPDC*SDYLGDFLHCSHCC Trigger: GCAGCAGTGGGAGCAGTGGAGGAAGTCACCCAAGTAGTCGGAGCAGCAGTCGGGAGAACAGCGGAAGTGGTAGTGTGGGGGTACCCATTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 9 transcripts: ENSMUST00000052332.15 ENSMUST00000185788.7 ENSMUST00000186097.7 ENSMUST00000187400.7 ENSMUST00000187709.7 ENSMUST00000188594.7 ENSMUST00000188618.7 ENSMUST00000189980.7 ENSMUST00000190158.2 |
||
| CDS GCA 90 bp | CAGCAATGGGTACCCCCACACTACCACTTCCGCTGTTCTCCCGACTaGTGCTCCGACTACTTGGGTGACTTCCTCCACTGCTCCCACTGC | + |
|
Preference number: 5 (lower is better) Translates to: QQWVPPHYHFRCSPD*CSDYLGDFLHCSHC Trigger: GCAGTGGGAGCAGTGGAGGAAGTCACCCAAGTAGTCGGAGCAGCAGTCGGGAGAACAGCGGAAGTGGTAGTGTGGGGGTACCCATTGCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 9 transcripts: ENSMUST00000052332.15 ENSMUST00000185788.7 ENSMUST00000186097.7 ENSMUST00000187400.7 ENSMUST00000187709.7 ENSMUST00000188594.7 ENSMUST00000188618.7 ENSMUST00000189980.7 ENSMUST00000190158.2 |
||
| CDS CCA 90 bp | AGAAGTAGCAGGAAGGGGAGGAGTGCCAGCAGAGCCAGCAGGGGCTaGAAAGACGCTTGGAGGAGACGGAGTAGGCACAGCAATGGGTAC | + |
|
Preference number: 5 (lower is better) Translates to: RSSRKGRSASRASRG*KDAWRRRSRHSNGY Trigger: GTACCCATTGCTGTGCCTACTCCGTCTCCTCCAAGCGTCTTTCCAGCCCCTGCTGGCTCTGCTGGCACTCCTCCCCTTCCTGCTACTTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000185788.7 ENSMUST00000186097.7 ENSMUST00000188594.7 ENSMUST00000188618.7 ENSMUST00000190158.2 |
||
| CDS-3UTR CAA 90 bp | AAAAGTGTGAGCCGGGCGGTGGTGGCGCACGCCTTTAGTCCCAGCACTCGGCAGACTGGCCGCTCAAGGTaGGCTGGCGCAATAATCTTA | + |
|
Preference number: 5 (lower is better) Translates to: KSVSRAVVAHAFSPSTRQTGRSR*AGAIIL Trigger: TAAGATTATTGCGCCAGCCAACCTTGAGCGGCCAGT...CTGCCGAGTGCTGGGACTAAAGGCGTGCGCCACCACCGCCCGGCTCACACTTTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052332.15 ENSMUST00000188618.7 ENSMUST00000189980.7 |
||
| CDS GCA 90 bp | CGGTGGGTCCTCTTCAGCGTACGGATCGCTGTACTCAACCACAGCTaGTTCCTCCTCTTCATAATCTTCTGGAGGAGGCGGTGGAGGGGG | + |
|
Preference number: 5 (lower is better) Translates to: RWVLFSVRIAVLNHS*FLLFIIFWRRRWRG Trigger: CCCCCTCCACCGCCTCCTCCAGAAGATTATGAAGAGGAGGAAGCAGCTGTGGTTGAGTACAGCGATCCGTACGCTGAAGAGGACCCACCG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENSMUST00000052332.15 ENSMUST00000185788.7 ENSMUST00000186097.7 ENSMUST00000187400.7 ENSMUST00000187709.7 ENSMUST00000188594.7 ENSMUST00000188618.7 ENSMUST00000189980.7 ENSMUST00000190158.2 |
||
| CDS CCA 90 bp | CACACTACCACTTCCGCTGTTCTCCCGACTGCTGCTCCGACTACTTaGGTGACTTCCTCCACTGCTCCCACTGCTGCCAAGTGTCCCCTT | + |
|
Preference number: 5 (lower is better) Translates to: HTTTSAVLPTAAPTT*VTSSTAPTAAKCPL Trigger: AAGGGGACACTTGGCAGCAGTGGGAGCAGTGGAGGAAGTCACCCAAGTAGTCGGAGCAGCAGTCGGGAGAACAGCGGAAGTGGTAGTGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000185788.7 ENSMUST00000187400.7 ENSMUST00000188594.7 ENSMUST00000190158.2 |
||
| CDS CCA 90 bp | AGTGAAGCCATCAGCAAGGCTCTGTGCACCCCCAGCAGCAGCGTCTaGAAAGACGCTTGGAGGAGACGGAGTAGGCACAGCAATGGGTAC | + |
|
Preference number: 5 (lower is better) Translates to: SEAISKALCTPSSSV*KDAWRRRSRHSNGY Trigger: GTACCCATTGCTGTGCCTACTCCGTCTCCTCCAAGCGTCTTTCCAGACGCTGCTGCTGGGGGTGCACAGAGCCTTGCTGATGGCTTCACT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000189980.7 |
||
| CDS-3UTR CAA 90 bp | CACTCGGCAGGCAGAGGCAGGTGGATTTCTGAGTTTGAGGCCAGCCTGGTCTACTGCTGCTCCGACTACTaGGGTGACTTCCTCCACTGC | + |
|
Preference number: 5 (lower is better) Translates to: HSAGRGRWISEFEASLVYCCSDY*GDFLHC Trigger: GCAGTGGAGGAAGTCACCCAAGTAGTCGGAGCAGCA...GTAGACCAGGCTGGCCTCAAACTCAGAAATCCACCTGCCTCTGCCTGCCGAGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052332.15 ENSMUST00000188618.7 ENSMUST00000189980.7 |
||
| CDS GCA 90 bp | AATAACAGGGGGAGTTGGAGAAGTGAAGCCATCAGCAAGGCTCTGTaGACCCCCAGCAGCAGCGTCTGGAAAGACGCTTGGAGGAGACGG | + |
|
Preference number: 5 (lower is better) Translates to: NNRGSWRSEAISKAL*TPSSSVWKDAWRRR Trigger: CCGTCTCCTCCAAGCGTCTTTCCAGACGCTGCTGCTGGGGGTGCACAGAGCCTTGCTGATGGCTTCACTTCTCCAACTCCCCCTGTTATT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000189980.7 |
||
| CDS CCA 90 bp | GGTTGGGCTAGGTACGTAATCATTTGGTACCACTGGAGGACGCACTaGCTCCAGTGTTCGATAGGGGGAGTGCCGCCCAAGTGTCCCCTT | + |
|
Preference number: 5 (lower is better) Translates to: GWARYVIIWYHWRTH*LQCSIGGVPPKCPL Trigger: AAGGGGACACTTGGGCGGCACTCCCCCTATCGAACACTGGAGCCAGTGCGTCCTCCAGTGGTACCAAATGATTACGTACCTAGCCCAACC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000052332.15 ENSMUST00000186097.7 ENSMUST00000187709.7 ENSMUST00000188618.7 ENSMUST00000189980.7 |
||
| CDS CCA 90 bp | AGCCATATTACGGGTTGGGCTAGGTACGTAATCATTTGGTACCACTaGAGGACGCACTGGCTCCAGTGTTCGATAGGGGGAGTGCCGCCC | + |
|
Preference number: 5 (lower is better) Translates to: SHITGWARYVIIWYH*RTHWLQCSIGGVPP Trigger: GGGCGGCACTCCCCCTATCGAACACTGGAGCCAGTGCGTCCTCCAGTGGTACCAAATGATTACGTACCTAGCCCAACCCGTAATATGGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000052332.15 ENSMUST00000186097.7 ENSMUST00000187709.7 ENSMUST00000188618.7 ENSMUST00000189980.7 |
||
| CDS CCA 90 bp | AGCTGTCCTCACAGGGCTCTGCTGCGAGGGAGCCATATTACGGGTTaGGCTAGGTACGTAATCATTTGGTACCACTGGAGGACGCACTGG | + |
|
Preference number: 5 (lower is better) Translates to: SCPHRALLRGSHITG*ARYVIIWYHWRTHW Trigger: CCAGTGCGTCCTCCAGTGGTACCAAATGATTACGTACCTAGCCCAACCCGTAATATGGCTCCCTCGCAGCAGAGCCCTGTGAGGACAGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000052332.15 ENSMUST00000186097.7 ENSMUST00000187709.7 ENSMUST00000188618.7 ENSMUST00000189980.7 |
||
| CDS-3UTR CAA 90 bp | GGGAGGAAATTCCCAGGGCCTCAAGCTAATCTGGGAAGACCTGACCTCCTGAGATGCTGCTCCGACTACTaGGGTGACTTCCTCCACTGC | + |
|
Preference number: 5 (lower is better) Translates to: GRKFPGPQANLGRPDLLRCCSDY*GDFLHC Trigger: GCAGTGGAGGAAGTCACCCAAGTAGTCGGAGCAGCA...TCTCAGGAGGTCAGGTCTTCCCAGATTAGCTTGAGGCCCTGGGAATTTCCTCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000052332.15 ENSMUST00000185788.7 ENSMUST00000186097.7 ENSMUST00000187709.7 ENSMUST00000188594.7 ENSMUST00000189980.7 ENSMUST00000190158.2 |
||
| CDS CCA 90 bp | CTGCGAGGGAGCCATATTACGGGTTGGGCTAGGTACGTAATCATTTaGTACCACTGGAGGACGCACTGGCTCCAGTGTTCGATAGGGGGA | + |
|
Preference number: 5 (lower is better) Translates to: LRGSHITGWARYVII*YHWRTHWLQCSIGG Trigger: TCCCCCTATCGAACACTGGAGCCAGTGCGTCCTCCAGTGGTACCAAATGATTACGTACCTAGCCCAACCCGTAATATGGCTCCCTCGCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000052332.15 ENSMUST00000186097.7 ENSMUST00000187709.7 ENSMUST00000188618.7 ENSMUST00000189980.7 |
||
| CDS CCA 90 bp | GCGAGAGGCAGGCCTGTTCATGCTGTAGAACTGAACAGGATGACCTaGAAAGACGCTTGGAGGAGACGGAGTAGGCACAGCAATGGGTAC | + |
|
Preference number: 5 (lower is better) Translates to: ARGRPVHAVELNRMT*KDAWRRRSRHSNGY Trigger: GTACCCATTGCTGTGCCTACTCCGTCTCCTCCAAGCGTCTTTCCAGGTCATCCTGTTCAGTTCTACAGCATGAACAGGCCTGCCTCTCGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052332.15 ENSMUST00000187400.7 ENSMUST00000187709.7 |
||
| CDS-3UTR CAA 90 bp | CATATACTGAAAGTAAAGGGCAAGGGTGTCCACCAGGCCATGAGGTTAGCCCCATTTCCAAGTAAGCCCTaGGCGCCCACGGTGGGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: HILKVKGKGVHQAMRLAPFPSKP*APTVGP Trigger: AGGACCCACCGTGGGCGCCAAGGGCTTACTTGGAAA...TGGGGCTAACCTCATGGCCTGGTGGACACCCTTGCCCTTTACTTTCAGTATATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052332.15 ENSMUST00000185788.7 ENSMUST00000189980.7 |
||
| CDS CCA 90 bp | ATAAATTGCCACAACCTTTTCCAAGTAAGCCCTTGGCGCCCACGGTaGGTCCTCTTCAGCGTACGGATCGCTGTACTCAACCACAGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: INCHNLFQVSPWRPR*VLFSVRIAVLNHSC Trigger: GCAGCTGTGGTTGAGTACAGCGATCCGTACGCTGAAGAGGACCCACCGTGGGCGCCAAGGGCTTACTTGGAAAAGGTTGTGGCAATTTAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENSMUST00000052332.15 ENSMUST00000185788.7 ENSMUST00000186097.7 ENSMUST00000187400.7 ENSMUST00000187709.7 ENSMUST00000188594.7 ENSMUST00000188618.7 ENSMUST00000189980.7 ENSMUST00000190158.2 |
||
| CDS CCA 90 bp | TATGGAAGGAGGACGTCTATAGGGCAACGAGCCCCCTATTGTAGGTaGTGTATGGCGAGAGGCAGGCCTGTTCATGCTGTAGAACTGAAC | + |
|
Preference number: 5 (lower is better) Translates to: YGRRTSIGQRAPYCR*CMARGRPVHAVELN Trigger: GTTCAGTTCTACAGCATGAACAGGCCTGCCTCTCGCCATACACCACCTACAATAGGGGGCTCGTTGCCCTATAGACGTCCTCCTTCCATA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 9 transcripts: ENSMUST00000052332.15 ENSMUST00000185788.7 ENSMUST00000186097.7 ENSMUST00000187400.7 ENSMUST00000187709.7 ENSMUST00000188594.7 ENSMUST00000188618.7 ENSMUST00000189980.7 ENSMUST00000190158.2 |
||
| CDS-3UTR CAA 90 bp | TTCATTTCACTGGGAGGAAATTCCCAGGGCCTCAAGCTAATCTGGGAAGACCTGTTGGGGGCTTCTGAGTaGGAGGTGTCGTACGTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: FISLGGNSQGLKLIWEDLLGASE*EVSYVA Trigger: TGCCACGTACGACACCTCCAACTCAGAAGCCCCCAA...CAGGTCTTCCCAGATTAGCTTGAGGCCCTGGGAATTTCCTCCCAGTGAAATGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENSMUST00000052332.15 ENSMUST00000185788.7 ENSMUST00000186097.7 ENSMUST00000187709.7 ENSMUST00000188594.7 ENSMUST00000189980.7 ENSMUST00000190158.2 |
||
| CDS-3UTR CAA 90 bp | TTCATTTCACTGGGAGGAAATTCCCAGGGCCTCAAGCTAATCTGGGAAGACCTGTGCTGCTCCGACTACTaGGGTGACTTCCTCCACTGC | + |
|
Preference number: 5 (lower is better) Translates to: FISLGGNSQGLKLIWEDLCCSDY*GDFLHC Trigger: GCAGTGGAGGAAGTCACCCAAGTAGTCGGAGCAGCA...CAGGTCTTCCCAGATTAGCTTGAGGCCCTGGGAATTTCCTCCCAGTGAAATGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000052332.15 ENSMUST00000185788.7 ENSMUST00000186097.7 ENSMUST00000187709.7 ENSMUST00000188594.7 ENSMUST00000189980.7 ENSMUST00000190158.2 |
||
| CDS-3UTR CAA 90 bp | TGCTTCATTCATTTCACTGGGAGGAAATTCCCAGGGCCTCAAGCTAATCTGGGATGCTGCTCCGACTACTaGGGTGACTTCCTCCACTGC | + |
|
Preference number: 5 (lower is better) Translates to: CFIHFTGRKFPGPQANLGCCSDY*GDFLHC Trigger: GCAGTGGAGGAAGTCACCCAAGTAGTCGGAGCAGCA...TCCCAGATTAGCTTGAGGCCCTGGGAATTTCCTCCCAGTGAAATGAATGAAGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000052332.15 ENSMUST00000185788.7 ENSMUST00000186097.7 ENSMUST00000187709.7 ENSMUST00000188594.7 ENSMUST00000189980.7 ENSMUST00000190158.2 |
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| CDS-3UTR CAA 90 bp | CAAAGCAGAGGCAATGAGCATCCAATGTCACAGATTCTGCAGGAAGAGAAATCCTTTCCAAGTAAGCCCTaGGCGCCCACGGTGGGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: QSRGNEHPMSQILQEEKSFPSKP*APTVGP Trigger: AGGACCCACCGTGGGCGCCAAGGGCTTACTTGGAAA...GGATTTCTCTTCCTGCAGAATCTGTGACATTGGATGCTCATTGCCTCTGCTTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052332.15 ENSMUST00000185788.7 ENSMUST00000189980.7 |
||
| CDS-3UTR CAA 90 bp | GGGAGGAAATTCCCAGGGCCTCAAGCTAATCTGGGAAGACCTGACCTCCTGAGATCAGATACGCAACACTaGCTAAGGATTGAGTGGTGT | + |
|
Preference number: 5 (lower is better) Translates to: GRKFPGPQANLGRPDLLRSDTQH*LRIEWC Trigger: ACACCACTCAATCCTTAGCAAGTGTTGCGTATCTGA...TCTCAGGAGGTCAGGTCTTCCCAGATTAGCTTGAGGCCCTGGGAATTTCCTCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000052332.15 ENSMUST00000187709.7 ENSMUST00000188594.7 ENSMUST00000189980.7 |
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| CDS-3UTR CAA 90 bp | GGCAATGAGCATCCAATGTCACAGATTCTGCAGGAAGAGAAATCCAAGGGTGTATTGGGGGCTTCTGAGTaGGAGGTGTCGTACGTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: GNEHPMSQILQEEKSKGVLGASE*EVSYVA Trigger: TGCCACGTACGACACCTCCAACTCAGAAGCCCCCAA...TACACCCTTGGATTTCTCTTCCTGCAGAATCTGTGACATTGGATGCTCATTGCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000052332.15 ENSMUST00000185788.7 ENSMUST00000189980.7 ENSMUST00000190158.2 |
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| CDS-3UTR CAA 90 bp | TTGTATGCTTCATTCATTTCACTGGGAGGAAATTCCCAGGGCCTCAAGCTAATCTTTCCAAGTAAGCCCTaGGCGCCCACGGTGGGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: LYASFISLGGNSQGLKLIFPSKP*APTVGP Trigger: AGGACCCACCGTGGGCGCCAAGGGCTTACTTGGAAA...GATTAGCTTGAGGCCCTGGGAATTTCCTCCCAGTGAAATGAATGAAGCATACAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000052332.15 ENSMUST00000185788.7 ENSMUST00000186097.7 ENSMUST00000187709.7 ENSMUST00000188594.7 ENSMUST00000189980.7 ENSMUST00000190158.2 |
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| CDS-3UTR CAA 90 bp | AGTACCTACACCACATTTCACATTGCTTTCACTGGCTGCTATCAGCAATGCAGTTTTCCAAGTAAGCCCTaGGCGCCCACGGTGGGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: STYTTFHIAFTGCYQQCSFPSKP*APTVGP Trigger: AGGACCCACCGTGGGCGCCAAGGGCTTACTTGGAAA...ACTGCATTGCTGATAGCAGCCAGTGAAAGCAATGTGAAATGTGGTGTAGGTACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052332.15 ENSMUST00000185788.7 ENSMUST00000189980.7 |
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| CDS-3UTR CAA 90 bp | AGATTCTGCAGGAAGAGAAATCCAAGGGTGTACAGTATTCCTGAGAAAGATCCCTTTCCAAGTAAGCCCTaGGCGCCCACGGTGGGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: RFCRKRNPRVYSIPEKDPFPSKP*APTVGP Trigger: AGGACCCACCGTGGGCGCCAAGGGCTTACTTGGAAA...GGGATCTTTCTCAGGAATACTGTACACCCTTGGATTTCTCTTCCTGCAGAATCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000052332.15 ENSMUST00000185788.7 ENSMUST00000189980.7 ENSMUST00000190158.2 |
||
| CDS-3UTR CAA 90 bp | TGCTTCATTCATTTCACTGGGAGGAAATTCCCAGGGCCTCAAGCTAATCTGGGAACTGGCCGCTCAAGGTaGGCTGGCGCAATAATCTTA | + |
|
Preference number: 5 (lower is better) Translates to: CFIHFTGRKFPGPQANLGTGRSR*AGAIIL Trigger: TAAGATTATTGCGCCAGCCAACCTTGAGCGGCCAGT...TCCCAGATTAGCTTGAGGCCCTGGGAATTTCCTCCCAGTGAAATGAATGAAGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000052332.15 ENSMUST00000185788.7 ENSMUST00000187709.7 ENSMUST00000188594.7 ENSMUST00000189980.7 |
||
| CDS-3UTR CAA 90 bp | AAACACTGGTTCCTTTCCTCTCCATATACTGAAAGTAAAGGGCAAGGGTGTCCATTGGGGGCTTCTGAGTaGGAGGTGTCGTACGTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: KHWFLSSPYTESKGQGCPLGASE*EVSYVA Trigger: TGCCACGTACGACACCTCCAACTCAGAAGCCCCCAA...TGGACACCCTTGCCCTTTACTTTCAGTATATGGAGAGGAAAGGAACCAGTGTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000052332.15 ENSMUST00000185788.7 ENSMUST00000189980.7 |
||
| CDS-3UTR CAA 90 bp | GGGAGGAAATTCCCAGGGCCTCAAGCTAATCTGGGAAGACCTGACCTCCTGAGATCTGATTCTGAAGGCTaGTTTGTGACGTTATGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: GRKFPGPQANLGRPDLLRSDSEG*FVTLWK Trigger: CTTCCATAACGTCACAAACAAGCCTTCAGAATCAGA...TCTCAGGAGGTCAGGTCTTCCCAGATTAGCTTGAGGCCCTGGGAATTTCCTCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000052332.15 ENSMUST00000185788.7 ENSMUST00000186097.7 ENSMUST00000187709.7 ENSMUST00000188594.7 ENSMUST00000189980.7 ENSMUST00000190158.2 |
||
| CDS-3UTR CAA 90 bp | CATATACTGAAAGTAAAGGGCAAGGGTGTCCACCAGGCCATGAGGTTAGCCCCATCAGATACGCAACACTaGCTAAGGATTGAGTGGTGT | + |
|
Preference number: 5 (lower is better) Translates to: HILKVKGKGVHQAMRLAPSDTQH*LRIEWC Trigger: ACACCACTCAATCCTTAGCAAGTGTTGCGTATCTGA...TGGGGCTAACCTCATGGCCTGGTGGACACCCTTGCCCTTTACTTTCAGTATATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052332.15 ENSMUST00000189980.7 |
||
| CDS-3UTR CAA 90 bp | GTACAAGGCCTGCATCTGGATTACAACAGCTTTACTTCCTCTTCGGTAGATGAGACTGGCCGCTCAAGGTaGGCTGGCGCAATAATCTTA | + |
|
Preference number: 5 (lower is better) Translates to: VQGLHLDYNSFTSSSVDETGRSR*AGAIIL Trigger: TAAGATTATTGCGCCAGCCAACCTTGAGCGGCCAGT...CTCATCTACCGAAGAGGAAGTAAAGCTGTTGTAATCCAGATGCAGGCCTTGTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052332.15 ENSMUST00000188618.7 ENSMUST00000189980.7 |
||
| CDS-3UTR CAA 90 bp | CTAGACAGCATAATGCAAATGACAGCAAGAAGATCCACTTGTTCAGACTTGGCTTTGGGGGCTTCTGAGTaGGAGGTGTCGTACGTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: LDSIMQMTARRSTCSDLALGASE*EVSYVA Trigger: TGCCACGTACGACACCTCCAACTCAGAAGCCCCCAA...AGCCAAGTCTGAACAAGTGGATCTTCTTGCTGTCATTTGCATTATGCTGTCTAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000052332.15 ENSMUST00000185788.7 ENSMUST00000187709.7 ENSMUST00000189980.7 ENSMUST00000190158.2 |
||
| CDS-3UTR CAA 90 bp | TTGTATGCTTCATTCATTTCACTGGGAGGAAATTCCCAGGGCCTCAAGCTAATCACTGGCCGCTCAAGGTaGGCTGGCGCAATAATCTTA | + |
|
Preference number: 5 (lower is better) Translates to: LYASFISLGGNSQGLKLITGRSR*AGAIIL Trigger: TAAGATTATTGCGCCAGCCAACCTTGAGCGGCCAGT...GATTAGCTTGAGGCCCTGGGAATTTCCTCCCAGTGAAATGAATGAAGCATACAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000052332.15 ENSMUST00000185788.7 ENSMUST00000187709.7 ENSMUST00000188594.7 ENSMUST00000189980.7 |
||
| CDS-3UTR CAA 90 bp | CATAATGCAAATGACAGCAAGAAGATCCACTTGTTCAGACTTGGCTTTCAGTTTTTTCCAAGTAAGCCCTaGGCGCCCACGGTGGGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: HNANDSKKIHLFRLGFQFFPSKP*APTVGP Trigger: AGGACCCACCGTGGGCGCCAAGGGCTTACTTGGAAA...AAACTGAAAGCCAAGTCTGAACAAGTGGATCTTCTTGCTGTCATTTGCATTATG 48% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 5 transcripts: ENSMUST00000052332.15 ENSMUST00000185788.7 ENSMUST00000187709.7 ENSMUST00000189980.7 ENSMUST00000190158.2 |
||
| CDS-3UTR CAA 90 bp | GGGAGGAAATTCCCAGGGCCTCAAGCTAATCTGGGAAGACCTGACCTCCTGAGACCATCGTCATTCTTCTaGATGACATATATAATGGCT | + |
|
Preference number: 5 (lower is better) Translates to: GRKFPGPQANLGRPDLLRPSSFF*MTYIMA Trigger: AGCCATTATATATGTCATCAAGAAGAATGACGATGG...TCTCAGGAGGTCAGGTCTTCCCAGATTAGCTTGAGGCCCTGGGAATTTCCTCCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000052332.15 ENSMUST00000185788.7 ENSMUST00000186097.7 ENSMUST00000187709.7 ENSMUST00000188594.7 ENSMUST00000189980.7 ENSMUST00000190158.2 |
||
| CDS-3UTR CAA 90 bp | TTCATTTCACTGGGAGGAAATTCCCAGGGCCTCAAGCTAATCTGGGAAGACCTGATCTGTAGGACATTGTaGGCCAAGGTGTTTATCAGA | + |
|
Preference number: 5 (lower is better) Translates to: FISLGGNSQGLKLIWEDLICRTL*AKVFIR Trigger: TCTGATAAACACCTTGGCCAACAATGTCCTACAGAT...CAGGTCTTCCCAGATTAGCTTGAGGCCCTGGGAATTTCCTCCCAGTGAAATGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000052332.15 ENSMUST00000187709.7 ENSMUST00000188594.7 ENSMUST00000189980.7 |
||
| CDS TCA 90 bp | GTTATAAAAAGGACCTCCATTCATCTGATTCTGAAGGCTTGTTTGTaGCGTTATGGAAGGAGGACGTCTATAGGGCAACGAGCCCCCTAT | + |
|
Preference number: 5 (lower is better) Translates to: VIKRTSIHLILKACL*RYGRRTSIGQRAPY Trigger: ATAGGGGGCTCGTTGCCCTATAGACGTCCTCCTTCCATAACGTCACAAACAAGCCTTCAGAATCAGATGAATGGAGGTCCTTTTTATAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 9 transcripts: ENSMUST00000052332.15 ENSMUST00000185788.7 ENSMUST00000186097.7 ENSMUST00000187400.7 ENSMUST00000187709.7 ENSMUST00000188594.7 ENSMUST00000188618.7 ENSMUST00000189980.7 ENSMUST00000190158.2 |
||
| CDS CCA 90 bp | TTATCAGATACGCAACACTTGCTAAGGATTGAGTGGTGTAGGCTTTaGTTTCTTCTAGGGCTCGCTGCTTATCTGGTGACTGGATGTAGT | + |
|
Preference number: 5 (lower is better) Translates to: LSDTQHLLRIEWCRL*FLLGLAAYLVTGCS Trigger: ACTACATCCAGTCACCAGATAAGCAGCGAGCCCTAGAAGAAACCAAAGCCTACACCACTCAATCCTTAGCAAGTGTTGCGTATCTGATAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000052332.15 ENSMUST00000187709.7 ENSMUST00000188594.7 ENSMUST00000188618.7 ENSMUST00000189980.7 |
||
| CDS-3UTR CAA 90 bp | TGCTTCATTCATTTCACTGGGAGGAAATTCCCAGGGCCTCAAGCTAATCTGGGAATCTGTAGGACATTGTaGGCCAAGGTGTTTATCAGA | + |
|
Preference number: 5 (lower is better) Translates to: CFIHFTGRKFPGPQANLGICRTL*AKVFIR Trigger: TCTGATAAACACCTTGGCCAACAATGTCCTACAGAT...TCCCAGATTAGCTTGAGGCCCTGGGAATTTCCTCCCAGTGAAATGAATGAAGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000052332.15 ENSMUST00000187709.7 ENSMUST00000188594.7 ENSMUST00000189980.7 |
||
| CDS-3UTR CAA 90 bp | ATCCCAGATATTTTTCCTCAAGTCAGTCTTGGTCTTACATGTTTTAGCTACATGTGCTGCTCCGACTACTaGGGTGACTTCCTCCACTGC | + |
|
Preference number: 5 (lower is better) Translates to: IPDIFPQVSLGLTCFSYMCCSDY*GDFLHC Trigger: GCAGTGGAGGAAGTCACCCAAGTAGTCGGAGCAGCA...CATGTAGCTAAAACATGTAAGACCAAGACTGACTTGAGGAAAAATATCTGGGAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000052332.15 ENSMUST00000185788.7 ENSMUST00000189980.7 ENSMUST00000190158.2 |
||
| CDS-3UTR CAA 90 bp | AACACAGGGTTTACAGTGTTAAAGAAGGAAAACAGCCTTAAGCAATCAAAAAGCTGCTGCTCCGACTACTaGGGTGACTTCCTCCACTGC | + |
|
Preference number: 5 (lower is better) Translates to: NTGFTVLKKENSLKQSKSCCSDY*GDFLHC Trigger: GCAGTGGAGGAAGTCACCCAAGTAGTCGGAGCAGCA...GCTTTTTGATTGCTTAAGGCTGTTTTCCTTCTTTAACACTGTAAACCCTGTGTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000052332.15 ENSMUST00000185788.7 ENSMUST00000189980.7 |
||
| CDS-3UTR CAA 90 bp | TGCTTCATTCATTTCACTGGGAGGAAATTCCCAGGGCCTCAAGCTAATCTGGGATCTGATTCTGAAGGCTaGTTTGTGACGTTATGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: CFIHFTGRKFPGPQANLGSDSEG*FVTLWK Trigger: CTTCCATAACGTCACAAACAAGCCTTCAGAATCAGA...TCCCAGATTAGCTTGAGGCCCTGGGAATTTCCTCCCAGTGAAATGAATGAAGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000052332.15 ENSMUST00000185788.7 ENSMUST00000186097.7 ENSMUST00000187709.7 ENSMUST00000188594.7 ENSMUST00000189980.7 ENSMUST00000190158.2 |
||
| CDS-3UTR CAA 90 bp | AGTACCTACACCACATTTCACATTGCTTTCACTGGCTGCTATCAGCAATGCAGTTCAGATACGCAACACTaGCTAAGGATTGAGTGGTGT | + |
|
Preference number: 5 (lower is better) Translates to: STYTTFHIAFTGCYQQCSSDTQH*LRIEWC Trigger: ACACCACTCAATCCTTAGCAAGTGTTGCGTATCTGA...ACTGCATTGCTGATAGCAGCCAGTGAAAGCAATGTGAAATGTGGTGTAGGTACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052332.15 ENSMUST00000189980.7 |
||
| CDS-3UTR CAA 90 bp | TTGTATGCTTCATTCATTTCACTGGGAGGAAATTCCCAGGGCCTCAAGCTAATCAGCATCTGTAGGACATaGTTGGCCAAGGTGTTTATC | + |
|
Preference number: 5 (lower is better) Translates to: LYASFISLGGNSQGLKLISICRT*LAKVFI Trigger: GATAAACACCTTGGCCAACAATGTCCTACAGATGCT...GATTAGCTTGAGGCCCTGGGAATTTCCTCCCAGTGAAATGAATGAAGCATACAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000052332.15 ENSMUST00000187709.7 ENSMUST00000188594.7 ENSMUST00000189980.7 |
||
| CDS-3UTR CAA 90 bp | CCTCAGTACATGAAGTACCTACACCACATTTCACATTGCTTTCACTGGCTGCTAAGCATCTGTAGGACATaGTTGGCCAAGGTGTTTATC | + |
|
Preference number: 5 (lower is better) Translates to: PQYMKYLHHISHCFHWLLSICRT*LAKVFI Trigger: GATAAACACCTTGGCCAACAATGTCCTACAGATGCT...TAGCAGCCAGTGAAAGCAATGTGAAATGTGGTGTAGGTACTTCATGTACTGAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052332.15 ENSMUST00000189980.7 |
||
| CDS-3UTR CAA 90 bp | AGATTCTGCAGGAAGAGAAATCCAAGGGTGTACAGTATTCCTGAGAAAGATCCCATCTGTAGGACATTGTaGGCCAAGGTGTTTATCAGA | + |
|
Preference number: 5 (lower is better) Translates to: RFCRKRNPRVYSIPEKDPICRTL*AKVFIR Trigger: TCTGATAAACACCTTGGCCAACAATGTCCTACAGAT...GGGATCTTTCTCAGGAATACTGTACACCCTTGGATTTCTCTTCCTGCAGAATCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052332.15 ENSMUST00000189980.7 |
||
| CDS-3UTR CAA 90 bp | AACACAGGGTTTACAGTGTTAAAGAAGGAAAACAGCCTTAAGCAATCAAAAAGCACTGGCCGCTCAAGGTaGGCTGGCGCAATAATCTTA | + |
|
Preference number: 5 (lower is better) Translates to: NTGFTVLKKENSLKQSKSTGRSR*AGAIIL Trigger: TAAGATTATTGCGCCAGCCAACCTTGAGCGGCCAGT...GCTTTTTGATTGCTTAAGGCTGTTTTCCTTCTTTAACACTGTAAACCCTGTGTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000052332.15 ENSMUST00000185788.7 ENSMUST00000189980.7 |
||
| CDS-3UTR CAA 90 bp | TCCAATGTCACAGATTCTGCAGGAAGAGAAATCCAAGGGTGTACAGTATTCCTGTCTGATTCTGAAGGCTaGTTTGTGACGTTATGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: SNVTDSAGREIQGCTVFLSDSEG*FVTLWK Trigger: CTTCCATAACGTCACAAACAAGCCTTCAGAATCAGA...CAGGAATACTGTACACCCTTGGATTTCTCTTCCTGCAGAATCTGTGACATTGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000052332.15 ENSMUST00000185788.7 ENSMUST00000189980.7 ENSMUST00000190158.2 |
||
| CDS-3UTR CAA 90 bp | CCTCAGTACATGAAGTACCTACACCACATTTCACATTGCTTTCACTGGCTGCTATCTGATTCTGAAGGCTaGTTTGTGACGTTATGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: PQYMKYLHHISHCFHWLLSDSEG*FVTLWK Trigger: CTTCCATAACGTCACAAACAAGCCTTCAGAATCAGA...TAGCAGCCAGTGAAAGCAATGTGAAATGTGGTGTAGGTACTTCATGTACTGAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052332.15 ENSMUST00000185788.7 ENSMUST00000189980.7 |
||
| CDS-3UTR CAA 90 bp | TGCTTCATTCATTTCACTGGGAGGAAATTCCCAGGGCCTCAAGCTAATCTGGGACCATCGTCATTCTTCTaGATGACATATATAATGGCT | + |
|
Preference number: 5 (lower is better) Translates to: CFIHFTGRKFPGPQANLGPSSFF*MTYIMA Trigger: AGCCATTATATATGTCATCAAGAAGAATGACGATGG...TCCCAGATTAGCTTGAGGCCCTGGGAATTTCCTCCCAGTGAAATGAATGAAGCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000052332.15 ENSMUST00000185788.7 ENSMUST00000186097.7 ENSMUST00000187709.7 ENSMUST00000188594.7 ENSMUST00000189980.7 ENSMUST00000190158.2 |
||
| CDS-3UTR CAA 90 bp | TGTCATCCTTATAATCTACAAACAGGACAGGGTGCAAGGGAGTTCAAGGTTAACATCTGTAGGACATTGTaGGCCAAGGTGTTTATCAGA | + |
|
Preference number: 5 (lower is better) Translates to: CHPYNLQTGQGAREFKVNICRTL*AKVFIR Trigger: TCTGATAAACACCTTGGCCAACAATGTCCTACAGAT...GTTAACCTTGAACTCCCTTGCACCCTGTCCTGTTTGTAGATTATAAGGATGACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052332.15 ENSMUST00000189980.7 |
||
| CDS-3UTR CAA 90 bp | CCAGTGCAAGTCTTCAGCACAAAGGATTTCACAAGTGTTTTCTGCAAACCCCAAGTAAGTTCGATTTCTTaGATTCACAGAAGCTGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: PVQVFSTKDFTSVFCKPQVSSIS*IHRSCP Trigger: AGGACAGCTTCTGTGAATCAAAGAAATCGAACTTAC...TTGGGGTTTGCAGAAAACACTTGTGAAATCCTTTGTGCTGAAGACTTGCACTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000052332.15 ENSMUST00000188618.7 ENSMUST00000189980.7 |
||
| CDS-3UTR CAA 90 bp | TTGTATGCTTCATTCATTTCACTGGGAGGAAATTCCCAGGGCCTCAAGCTAATCGTAAGTTCGATTTCTTaGATTCACAGAAGCTGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: LYASFISLGGNSQGLKLIVSSIS*IHRSCP Trigger: AGGACAGCTTCTGTGAATCAAAGAAATCGAACTTAC...GATTAGCTTGAGGCCCTGGGAATTTCCTCCCAGTGAAATGAATGAAGCATACAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000052332.15 ENSMUST00000186097.7 ENSMUST00000187709.7 ENSMUST00000189980.7 |
||
| CDS-3UTR CAA 90 bp | CTAGACAGCATAATGCAAATGACAGCAAGAAGATCCACTTGTTCAGACTTGGCTTCTGATTCTGAAGGCTaGTTTGTGACGTTATGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: LDSIMQMTARRSTCSDLASDSEG*FVTLWK Trigger: CTTCCATAACGTCACAAACAAGCCTTCAGAATCAGA...AGCCAAGTCTGAACAAGTGGATCTTCTTGCTGTCATTTGCATTATGCTGTCTAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000052332.15 ENSMUST00000185788.7 ENSMUST00000187709.7 ENSMUST00000189980.7 ENSMUST00000190158.2 |
||
| CDS-3UTR CAA 90 bp | CAATCTAGACAGCATAATGCAAATGACAGCAAGAAGATCCACTTGTTCAGACTTTCAGATACGCAACACTaGCTAAGGATTGAGTGGTGT | + |
|
Preference number: 5 (lower is better) Translates to: QSRQHNANDSKKIHLFRLSDTQH*LRIEWC Trigger: ACACCACTCAATCCTTAGCAAGTGTTGCGTATCTGA...AAGTCTGAACAAGTGGATCTTCTTGCTGTCATTTGCATTATGCTGTCTAGATTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052332.15 ENSMUST00000187709.7 ENSMUST00000189980.7 |
||
| CDS-3UTR CAA 90 bp | TTTAGAAGGGGTGAATGCAGGTTGCACTTGAATTCCTTTAAGCAATCTGAATACTCAGATACGCAACACTaGCTAAGGATTGAGTGGTGT | + |
|
Preference number: 5 (lower is better) Translates to: FRRGECRLHLNSFKQSEYSDTQH*LRIEWC Trigger: ACACCACTCAATCCTTAGCAAGTGTTGCGTATCTGA...GTATTCAGATTGCTTAAAGGAATTCAAGTGCAACCTGCATTCACCCCTTCTAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052332.15 ENSMUST00000188618.7 |
||
| CDS-3UTR CAA 90 bp | AATCTAGACAGCATAATGCAAATGACAGCAAGAAGATCCACTTGTTCAGACTTGAGCATCTGTAGGACATaGTTGGCCAAGGTGTTTATC | + |
|
Preference number: 5 (lower is better) Translates to: NLDSIMQMTARRSTCSDLSICRT*LAKVFI Trigger: GATAAACACCTTGGCCAACAATGTCCTACAGATGCT...CAAGTCTGAACAAGTGGATCTTCTTGCTGTCATTTGCATTATGCTGTCTAGATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052332.15 ENSMUST00000187709.7 ENSMUST00000189980.7 |
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| CDS-3UTR CAA 90 bp | GTTGTGCTCCATTCTGTTCCTGCCAGCATAGAACTAAATACAATGCATTCTTGCGTAAGTTCGATTTCTTaGATTCACAGAAGCTGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: VVLHSVPASIELNTMHSCVSSIS*IHRSCP Trigger: AGGACAGCTTCTGTGAATCAAAGAAATCGAACTTAC...GCAAGAATGCATTGTATTTAGTTCTATGCTGGCAGGAACAGAATGGAGCACAAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052332.15 ENSMUST00000188618.7 |
||
| CDS-3UTR CAA 90 bp | ATCCTTATAATCTACAAACAGGACAGGGTGCAAGGGAGTTCAAGGTTAACTCACGTAAGTTCGATTTCTTaGATTCACAGAAGCTGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: ILIIYKQDRVQGSSRLTHVSSIS*IHRSCP Trigger: AGGACAGCTTCTGTGAATCAAAGAAATCGAACTTAC...GTGAGTTAACCTTGAACTCCCTTGCACCCTGTCCTGTTTGTAGATTATAAGGAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052332.15 ENSMUST00000189980.7 |
||
| CDS-3UTR CAA 90 bp | TTTAGAAGGGGTGAATGCAGGTTGCACTTGAATTCCTTTAAGCAATCTGAATACATCTGTAGGACATTGTaGGCCAAGGTGTTTATCAGA | + |
|
Preference number: 5 (lower is better) Translates to: FRRGECRLHLNSFKQSEYICRTL*AKVFIR Trigger: TCTGATAAACACCTTGGCCAACAATGTCCTACAGAT...GTATTCAGATTGCTTAAAGGAATTCAAGTGCAACCTGCATTCACCCCTTCTAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052332.15 ENSMUST00000188618.7 |
||
| CDS-3UTR CAA 90 bp | ACAAACAAAACCTACAACCTTAAAGCAAAAGAGGTCTTGAGAAGAACACTGTCTAGCATCTGTAGGACATaGTTGGCCAAGGTGTTTATC | + |
|
Preference number: 5 (lower is better) Translates to: TNKTYNLKAKEVLRRTLSSICRT*LAKVFI Trigger: GATAAACACCTTGGCCAACAATGTCCTACAGATGCT...AGACAGTGTTCTTCTCAAGACCTCTTTTGCTTTAAGGTTGTAGGTTTTGTTTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000052332.15 ENSMUST00000188618.7 ENSMUST00000189980.7 |
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| CDS-3UTR CAA 90 bp | AGCAAGAAGATCCACTTGTTCAGACTTGGCTTTCAGTTTTTGATACAAGGGGATGTAAGTTCGATTTCTTaGATTCACAGAAGCTGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: SKKIHLFRLGFQFLIQGDVSSIS*IHRSCP Trigger: AGGACAGCTTCTGTGAATCAAAGAAATCGAACTTAC...ATCCCCTTGTATCAAAAACTGAAAGCCAAGTCTGAACAAGTGGATCTTCTTGCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000052332.15 ENSMUST00000187709.7 ENSMUST00000189980.7 |
||
| CDS-3UTR CAA 90 bp | AGTAAACAGCTCCCATTCATTTCAAAGATTTGGAAGTCTACCAACCATTTCTTCTCTGATTCTGAAGGCTaGTTTGTGACGTTATGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: SKQLPFISKIWKSTNHFFSDSEG*FVTLWK Trigger: CTTCCATAACGTCACAAACAAGCCTTCAGAATCAGA...GAAGAAATGGTTGGTAGACTTCCAAATCTTTGAAATGAATGGGAGCTGTTTACT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052332.15 ENSMUST00000188618.7 |
||
| CDS-3UTR CAA 90 bp | AGCAAGAAGATCCACTTGTTCAGACTTGGCTTTCAGTTTTTGATACAAGGGGATCCATCGTCATTCTTCTaGATGACATATATAATGGCT | + |
|
Preference number: 5 (lower is better) Translates to: SKKIHLFRLGFQFLIQGDPSSFF*MTYIMA Trigger: AGCCATTATATATGTCATCAAGAAGAATGACGATGG...ATCCCCTTGTATCAAAAACTGAAAGCCAAGTCTGAACAAGTGGATCTTCTTGCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000052332.15 ENSMUST00000185788.7 ENSMUST00000187709.7 ENSMUST00000189980.7 ENSMUST00000190158.2 |
||
| CDS-3UTR CAA 90 bp | AATCTAGACAGCATAATGCAAATGACAGCAAGAAGATCCACTTGTTCAGACTTGCCATCGTCATTCTTCTaGATGACATATATAATGGCT | + |
|
Preference number: 5 (lower is better) Translates to: NLDSIMQMTARRSTCSDLPSSFF*MTYIMA Trigger: AGCCATTATATATGTCATCAAGAAGAATGACGATGG...CAAGTCTGAACAAGTGGATCTTCTTGCTGTCATTTGCATTATGCTGTCTAGATT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000052332.15 ENSMUST00000185788.7 ENSMUST00000187709.7 ENSMUST00000189980.7 ENSMUST00000190158.2 |
||
| CDS-3UTR CAA 90 bp | CAATCTAGACAGCATAATGCAAATGACAGCAAGAAGATCCACTTGTTCAGACTTCCATCGTCATTCTTCTaGATGACATATATAATGGCT | + |
|
Preference number: 5 (lower is better) Translates to: QSRQHNANDSKKIHLFRLPSSFF*MTYIMA Trigger: AGCCATTATATATGTCATCAAGAAGAATGACGATGG...AAGTCTGAACAAGTGGATCTTCTTGCTGTCATTTGCATTATGCTGTCTAGATTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000052332.15 ENSMUST00000185788.7 ENSMUST00000187709.7 ENSMUST00000189980.7 ENSMUST00000190158.2 |
||
| CDS-3UTR CAA 90 bp | ATCCCAGATATTTTTCCTCAAGTCAGTCTTGGTCTTACATGTTTTAGCTACATGCCATCGTCATTCTTCTaGATGACATATATAATGGCT | + |
|
Preference number: 5 (lower is better) Translates to: IPDIFPQVSLGLTCFSYMPSSFF*MTYIMA Trigger: AGCCATTATATATGTCATCAAGAAGAATGACGATGG...CATGTAGCTAAAACATGTAAGACCAAGACTGACTTGAGGAAAAATATCTGGGAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000052332.15 ENSMUST00000185788.7 ENSMUST00000189980.7 ENSMUST00000190158.2 |
||
| CDS-3UTR CAA 90 bp | ACAAACAAAACCTACAACCTTAAAGCAAAAGAGGTCTTGAGAAGAACACTGTCTCCATCGTCATTCTTCTaGATGACATATATAATGGCT | + |
|
Preference number: 5 (lower is better) Translates to: TNKTYNLKAKEVLRRTLSPSSFF*MTYIMA Trigger: AGCCATTATATATGTCATCAAGAAGAATGACGATGG...AGACAGTGTTCTTCTCAAGACCTCTTTTGCTTTAAGGTTGTAGGTTTTGTTTGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000052332.15 ENSMUST00000189980.7 |
||
| CDS CCA 72 bp | AGGAAGGGGAGGAGTGCCAGCAGAGCCAGCAGGGGCTaGAAAGACGCTTGGAGGAGACGGAGTAGGCACAGC | + |
|
Preference number: 6 (lower is better) Translates to: RKGRSASRASRG*KDAWRRRSRHS Trigger: GCTGTGCCTACTCCGTCTCCTCCAAGCGTCTTTCCAGCCCCTGCTGGCTCTGCTGGCACTCCTCCCCTTCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000185788.7 ENSMUST00000186097.7 ENSMUST00000188594.7 ENSMUST00000188618.7 ENSMUST00000190158.2 |
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| CDS GCA 72 bp | GGGAGTTGGAGAAGTGAAGCCATCAGCAAGGCTCTGTaGACCCCCAGCAGCAGCGTCTGGGGCAGTGGAGGA | + |
|
Preference number: 6 (lower is better) Translates to: GSWRSEAISKAL*TPSSSVWGSGG Trigger: TCCTCCACTGCCCCAGACGCTGCTGCTGGGGGTGCACAGAGCCTTGCTGATGGCTTCACTTCTCCAACTCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000185788.7 ENSMUST00000186097.7 ENSMUST00000188594.7 ENSMUST00000188618.7 ENSMUST00000190158.2 |
||
| CDS CCA 72 bp | AGTGCCAGCAGAGCCAGCAGGGGCTGGAAAGACGCTTaGAGGAGACGGAGTAGGCACAGCAATGGGTACCCC | + |
|
Preference number: 6 (lower is better) Translates to: SASRASRGWKDA*RRRSRHSNGYP Trigger: GGGGTACCCATTGCTGTGCCTACTCCGTCTCCTCCAAGCGTCTTTCCAGCCCCTGCTGGCTCTGCTGGCACT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000185788.7 ENSMUST00000186097.7 ENSMUST00000188594.7 ENSMUST00000188618.7 ENSMUST00000190158.2 |
||
| CDS GCA 72 bp | CCCCCACACTACCACTTCCGCTGTTCTCCCGACTGCTaGTCCGACTACTTGGGTGACTTCCTCCACTGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: PPHYHFRCSPDC*SDYLGDFLHCS Trigger: GGAGCAGTGGAGGAAGTCACCCAAGTAGTCGGAGCAGCAGTCGGGAGAACAGCGGAAGTGGTAGTGTGGGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 9 transcripts: ENSMUST00000052332.15 ENSMUST00000185788.7 ENSMUST00000186097.7 ENSMUST00000187400.7 ENSMUST00000187709.7 ENSMUST00000188594.7 ENSMUST00000188618.7 ENSMUST00000189980.7 ENSMUST00000190158.2 |
||
| CDS CCA 72 bp | ATCAGCAAGGCTCTGTGCACCCCCAGCAGCAGCGTCTaGAAAGACGCTTGGAGGAGACGGAGTAGGCACAGC | + |
|
Preference number: 6 (lower is better) Translates to: ISKALCTPSSSV*KDAWRRRSRHS Trigger: GCTGTGCCTACTCCGTCTCCTCCAAGCGTCTTTCCAGACGCTGCTGCTGGGGGTGCACAGAGCCTTGCTGAT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000189980.7 |
||
| CDS CAA 90 bp | CCACACTACCACTTCCGCTGTTCTCCCGACTGCTGCTCCGACTACTaGGGTGACTTCCTCCACTGCTCCCACTGCTGCCAAGTGTCCCCT | + |
|
Preference number: 6 (lower is better) Translates to: PHYHFRCSPDCCSDY*GDFLHCSHCCQVSP Trigger: AGGGGACACTTGGCAGCAGTGGGAGCAGTGGAGGAAGTCACCCAAGTAGTCGGAGCAGCAGTCGGGAGAACAGCGGAAGTGGTAGTGTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000185788.7 ENSMUST00000187400.7 ENSMUST00000188594.7 ENSMUST00000190158.2 |
||
| CDS GCA 72 bp | GTACCCCCACACTACCACTTCCGCTGTTCTCCCGACTaGTGCTCCGACTACTTGGGTGACTTCCTCCACTGC | + |
|
Preference number: 6 (lower is better) Translates to: VPPHYHFRCSPD*CSDYLGDFLHC Trigger: GCAGTGGAGGAAGTCACCCAAGTAGTCGGAGCAGCAGTCGGGAGAACAGCGGAAGTGGTAGTGTGGGGGTAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 9 transcripts: ENSMUST00000052332.15 ENSMUST00000185788.7 ENSMUST00000186097.7 ENSMUST00000187400.7 ENSMUST00000187709.7 ENSMUST00000188594.7 ENSMUST00000188618.7 ENSMUST00000189980.7 ENSMUST00000190158.2 |
||
| CDS GCA 72 bp | GACTGCTGCTCCGACTACTTGGGTGACTTCCTCCACTaGTCCCACTGCTGCCAAGTGTCCCCTTCCCTGACA | + |
|
Preference number: 6 (lower is better) Translates to: DCCSDYLGDFLH*SHCCQVSPSLT Trigger: TGTCAGGGAAGGGGACACTTGGCAGCAGTGGGAGCAGTGGAGGAAGTCACCCAAGTAGTCGGAGCAGCAGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000185788.7 ENSMUST00000187400.7 ENSMUST00000188594.7 ENSMUST00000190158.2 |
||
| CDS GCA 72 bp | GGGAGTTGGAGAAGTGAAGCCATCAGCAAGGCTCTGTaGACCCCCAGCAGCAGCGTCTGGAAAGACGCTTGG | + |
|
Preference number: 6 (lower is better) Translates to: GSWRSEAISKAL*TPSSSVWKDAW Trigger: CCAAGCGTCTTTCCAGACGCTGCTGCTGGGGGTGCACAGAGCCTTGCTGATGGCTTCACTTCTCCAACTCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000189980.7 |
||
| CDS CAA 72 bp | CACTTCCGCTGTTCTCCCGACTGCTGCTCCGACTACTaGGGTGACTTCCTCCACTGCTCCCACTGCTGCCAA | + |
|
Preference number: 6 (lower is better) Translates to: HFRCSPDCCSDY*GDFLHCSHCCQ Trigger: TTGGCAGCAGTGGGAGCAGTGGAGGAAGTCACCCAAGTAGTCGGAGCAGCAGTCGGGAGAACAGCGGAAGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000185788.7 ENSMUST00000187400.7 ENSMUST00000188594.7 ENSMUST00000190158.2 |
||
| CDS CCA 72 bp | AGGTACGTAATCATTTGGTACCACTGGAGGACGCACTaGCTCCAGTGTTCGATAGGGGGAGTGCCGCCCAAG | + |
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Preference number: 6 (lower is better) Translates to: RYVIIWYHWRTH*LQCSIGGVPPK Trigger: CTTGGGCGGCACTCCCCCTATCGAACACTGGAGCCAGTGCGTCCTCCAGTGGTACCAAATGATTACGTACCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000052332.15 ENSMUST00000186097.7 ENSMUST00000187709.7 ENSMUST00000188618.7 ENSMUST00000189980.7 |
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| CDS CCA 72 bp | CACAACCTTTTCCAAGTAAGCCCTTGGCGCCCACGGTaGGTCCTCTTCAGCGTACGGATCGCTGTACTCAAC | + |
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Preference number: 6 (lower is better) Translates to: HNLFQVSPWRPR*VLFSVRIAVLN Trigger: GTTGAGTACAGCGATCCGTACGCTGAAGAGGACCCACCGTGGGCGCCAAGGGCTTACTTGGAAAAGGTTGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENSMUST00000052332.15 ENSMUST00000185788.7 ENSMUST00000186097.7 ENSMUST00000187400.7 ENSMUST00000187709.7 ENSMUST00000188594.7 ENSMUST00000188618.7 ENSMUST00000189980.7 ENSMUST00000190158.2 |
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| CDS CCA 72 bp | ACGGGTTGGGCTAGGTACGTAATCATTTGGTACCACTaGAGGACGCACTGGCTCCAGTGTTCGATAGGGGGA | + |
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Preference number: 6 (lower is better) Translates to: TGWARYVIIWYH*RTHWLQCSIGG Trigger: TCCCCCTATCGAACACTGGAGCCAGTGCGTCCTCCAGTGGTACCAAATGATTACGTACCTAGCCCAACCCGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000052332.15 ENSMUST00000186097.7 ENSMUST00000187709.7 ENSMUST00000188618.7 ENSMUST00000189980.7 |
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| CDS CCA 72 bp | CACAGGGCTCTGCTGCGAGGGAGCCATATTACGGGTTaGGCTAGGTACGTAATCATTTGGTACCACTGGAGG | + |
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Preference number: 6 (lower is better) Translates to: HRALLRGSHITG*ARYVIIWYHWR Trigger: CCTCCAGTGGTACCAAATGATTACGTACCTAGCCCAACCCGTAATATGGCTCCCTCGCAGCAGAGCCCTGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000052332.15 ENSMUST00000186097.7 ENSMUST00000187709.7 ENSMUST00000188618.7 ENSMUST00000189980.7 |
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| CDS CCA 72 bp | AGGACGTCTATAGGGCAACGAGCCCCCTATTGTAGGTaGTGTATGGCGAGAGGCAGGCCTGTTCATGCTGTA | + |
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Preference number: 6 (lower is better) Translates to: RTSIGQRAPYCR*CMARGRPVHAV Trigger: TACAGCATGAACAGGCCTGCCTCTCGCCATACACCACCTACAATAGGGGGCTCGTTGCCCTATAGACGTCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 9 transcripts: ENSMUST00000052332.15 ENSMUST00000185788.7 ENSMUST00000186097.7 ENSMUST00000187400.7 ENSMUST00000187709.7 ENSMUST00000188594.7 ENSMUST00000188618.7 ENSMUST00000189980.7 ENSMUST00000190158.2 |
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| CDS GCA 72 bp | CTCTTCAGCGTACGGATCGCTGTACTCAACCACAGCTaGTTCCTCCTCTTCATAATCTTCTGGAGGAGGCGG | + |
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Preference number: 6 (lower is better) Translates to: LFSVRIAVLNHS*FLLFIIFWRRR Trigger: CCGCCTCCTCCAGAAGATTATGAAGAGGAGGAAGCAGCTGTGGTTGAGTACAGCGATCCGTACGCTGAAGAG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENSMUST00000052332.15 ENSMUST00000185788.7 ENSMUST00000186097.7 ENSMUST00000187400.7 ENSMUST00000187709.7 ENSMUST00000188594.7 ENSMUST00000188618.7 ENSMUST00000189980.7 ENSMUST00000190158.2 |
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| CDS CCA 72 bp | AGGCCTGTTCATGCTGTAGAACTGAACAGGATGACCTaGAAAGACGCTTGGAGGAGACGGAGTAGGCACAGC | + |
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Preference number: 6 (lower is better) Translates to: RPVHAVELNRMT*KDAWRRRSRHS Trigger: GCTGTGCCTACTCCGTCTCCTCCAAGCGTCTTTCCAGGTCATCCTGTTCAGTTCTACAGCATGAACAGGCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052332.15 ENSMUST00000187400.7 ENSMUST00000187709.7 |
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| CDS CCA 72 bp | GGGACTTGGGGGCTTCTGAGTTGGAGGTGTCGTACGTaGCAATCCACCCATTTTCATATTCTGGGTACTCAC | + |
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Preference number: 6 (lower is better) Translates to: GTWGLLSWRCRT*QSTHFHILGTH Trigger: GTGAGTACCCAGAATATGAAAATGGGTGGATTGCCACGTACGACACCTCCAACTCAGAAGCCCCCAAGTCCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 10 transcripts: ENSMUST00000052332.15 ENSMUST00000185788.7 ENSMUST00000186097.7 ENSMUST00000187400.7 ENSMUST00000187709.7 ENSMUST00000188594.7 ENSMUST00000188618.7 ENSMUST00000189082.7 ENSMUST00000189980.7 ENSMUST00000190158.2 |
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| CDS CCA 72 bp | AGCCATATTACGGGTTGGGCTAGGTACGTAATCATTTaGTACCACTGGAGGACGCACTGGCTCCAGTGTTCG | + |
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Preference number: 6 (lower is better) Translates to: SHITGWARYVII*YHWRTHWLQCS Trigger: CGAACACTGGAGCCAGTGCGTCCTCCAGTGGTACCAAATGATTACGTACCTAGCCCAACCCGTAATATGGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000052332.15 ENSMUST00000186097.7 ENSMUST00000187709.7 ENSMUST00000188618.7 ENSMUST00000189980.7 |
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| CDS CCA 72 bp | GGATTCATCAAAGACTGGCTCTTCCACAGGTGGGGGTaGAGGTGGTGTATTATTTTCTTGGACTCTGGCCAC | + |
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Preference number: 6 (lower is better) Translates to: GFIKDWLFHRWG*RWCIIFLDSGH Trigger: GTGGCCAGAGTCCAAGAAAATAATACACCACCTCCACCCCCACCTGTGGAAGAGCCAGTCTTTGATGAATCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000190158.2 |
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| CDS CAA 72 bp | TCCACTGCTCCCACTGCTGCTGTAAGTTCGATTTCTTaGATTCACAGAAGCTGTCCTCACAGGGCTCTGCTG | + |
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Preference number: 6 (lower is better) Translates to: STAPTAAVSSIS*IHRSCPHRALL Trigger: CAGCAGAGCCCTGTGAGGACAGCTTCTGTGAATCAAAGAAATCGAACTTACAGCAGCAGTGGGAGCAGTGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000052332.15 ENSMUST00000186097.7 ENSMUST00000187709.7 ENSMUST00000188618.7 ENSMUST00000189980.7 |
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| CDS CCA 72 bp | ACGCAACACTTGCTAAGGATTGAGTGGTGTAGGCTTTaGTTTCTTCTAGGGCTCGCTGCTTATCTGGTGACT | + |
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Preference number: 6 (lower is better) Translates to: TQHLLRIEWCRL*FLLGLAAYLVT Trigger: AGTCACCAGATAAGCAGCGAGCCCTAGAAGAAACCAAAGCCTACACCACTCAATCCTTAGCAAGTGTTGCGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000052332.15 ENSMUST00000187709.7 ENSMUST00000188594.7 ENSMUST00000188618.7 ENSMUST00000189980.7 |
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| CDS CCA 72 bp | CATTCATCTGATTCTGAAGGCTTGTTTGTGACGTTATaGAAGGAGGACGTCTATAGGGCAACGAGCCCCCTA | + |
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Preference number: 6 (lower is better) Translates to: HSSDSEGLFVTL*KEDVYRATSPL Trigger: TAGGGGGCTCGTTGCCCTATAGACGTCCTCCTTCCATAACGTCACAAACAAGCCTTCAGAATCAGATGAATG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 9 transcripts: ENSMUST00000052332.15 ENSMUST00000185788.7 ENSMUST00000186097.7 ENSMUST00000187400.7 ENSMUST00000187709.7 ENSMUST00000188594.7 ENSMUST00000188618.7 ENSMUST00000189980.7 ENSMUST00000190158.2 |
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| CDS TCA 72 bp | AGGACCTCCATTCATCTGATTCTGAAGGCTTGTTTGTaGCGTTATGGAAGGAGGACGTCTATAGGGCAACGA | + |
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Preference number: 6 (lower is better) Translates to: RTSIHLILKACL*RYGRRTSIGQR Trigger: TCGTTGCCCTATAGACGTCCTCCTTCCATAACGTCACAAACAAGCCTTCAGAATCAGATGAATGGAGGTCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENSMUST00000052332.15 ENSMUST00000185788.7 ENSMUST00000186097.7 ENSMUST00000187400.7 ENSMUST00000187709.7 ENSMUST00000188594.7 ENSMUST00000188618.7 ENSMUST00000189980.7 ENSMUST00000190158.2 |
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| CDS CAA 90 bp | GATTCTGGTTATAAAAAGGACCTCCATTCATCTGATTCTGAAGGCTaGTTTGTGACGTTATGGAAGGAGGACGTCTATAGGGCAACGAGC | + |
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Preference number: 6 (lower is better) Translates to: DSGYKKDLHSSDSEG*FVTLWKEDVYRATS Trigger: GCTCGTTGCCCTATAGACGTCCTCCTTCCATAACGTCACAAACAAGCCTTCAGAATCAGATGAATGGAGGTCCTTTTTATAACCAGAATC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 9 transcripts: ENSMUST00000052332.15 ENSMUST00000185788.7 ENSMUST00000186097.7 ENSMUST00000187400.7 ENSMUST00000187709.7 ENSMUST00000188594.7 ENSMUST00000188618.7 ENSMUST00000189980.7 ENSMUST00000190158.2 |
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| CDS CCA 72 bp | ACTGGCCGCTCAAGGTTGGCTGGCGCAATAATCTTATaGGTCCTTGAAGTGTTTTTATTGGTGGTCAAAATA | + |
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Preference number: 6 (lower is better) Translates to: TGRSRLAGAIIL*VLEVFLLVVKI Trigger: TATTTTGACCACCAATAAAAACACTTCAAGGACCCATAAGATTATTGCGCCAGCCAACCTTGAGCGGCCAGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENSMUST00000052332.15 ENSMUST00000185788.7 ENSMUST00000187709.7 ENSMUST00000188594.7 ENSMUST00000188618.7 ENSMUST00000189082.7 ENSMUST00000189980.7 |
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| CDS CCA 72 bp | AATTGTGTAGTCAATAGGTTTTCGAATATAACGAACTaGCCGCTCAAGGTTGGCTGGCGCAATAATCTTATG | + |
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Preference number: 6 (lower is better) Translates to: NCVVNRFSNITN*PLKVGWRNNLM Trigger: CATAAGATTATTGCGCCAGCCAACCTTGAGCGGCCAGTTCGTTATATTCGAAAACCTATTGACTACACAATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000052332.15 ENSMUST00000185788.7 ENSMUST00000187709.7 ENSMUST00000188594.7 ENSMUST00000188618.7 ENSMUST00000189082.7 ENSMUST00000189980.7 |
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| CDS CCA 72 bp | GTGGAGGTGGTGTATCTGAAATATTTTCTTGGACTCTaGCCACAAATCCCATTAAAGGTAACTGAGGAGTTA | + |
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Preference number: 6 (lower is better) Translates to: VEVVYLKYFLGL*PQIPLKVTEEL Trigger: TAACTCCTCAGTTACCTTTAATGGGATTTGTGGCCAGAGTCCAAGAAAATATTTCAGATACACCACCTCCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000186097.7 ENSMUST00000187709.7 |
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| CDS CAA 72 bp | TATAAAAAGGACCTCCATTCATCTGATTCTGAAGGCTaGTTTGTGACGTTATGGAAGGAGGACGTCTATAGG | + |
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Preference number: 6 (lower is better) Translates to: YKKDLHSSDSEG*FVTLWKEDVYR Trigger: CCTATAGACGTCCTCCTTCCATAACGTCACAAACAAGCCTTCAGAATCAGATGAATGGAGGTCCTTTTTATA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 9 transcripts: ENSMUST00000052332.15 ENSMUST00000185788.7 ENSMUST00000186097.7 ENSMUST00000187400.7 ENSMUST00000187709.7 ENSMUST00000188594.7 ENSMUST00000188618.7 ENSMUST00000189980.7 ENSMUST00000190158.2 |
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