RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ABHD8 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000007950

Ensembl transcript IDs: ENSMUST00000008094.10

Found 125 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGGCTTCCCAGTGCGGAATGGAGCACAGCGGAGGGGAAGACCGAGTaGGATGGCAGCCCGCGCGCTGCAGCTTCAGGGACTCGGGGAGGC +
Preference number: 1 (lower is better)
Translates to: GLPSAEWSTAEGKTE*DGSPRAAASGTRGG
Trigger: GCCTCCCCGAGTCCCTGAAGCTGCAGCGCGCGGGCTGCCATCCCACTCGGTCTTCCCCTCCGCTGTGCTCCATTCCGCACTGGGAAGCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000008094.10
3UTR CCA 90 bp CCCTCCCTCCTTGGGTGCCTAGCTCCCAGTCCCAAGCAATGGGGATaGCGCGGTAGGGTCTCCCAGGACAGGATAGGAGCCCTTCCCCAG +
Preference number: 1 (lower is better)
Translates to: PSLLGCLAPSPKQWG*RGRVSQDRIGALPQ
Trigger: CTGGGGAAGGGCTCCTATCCTGTCCTGGGAGACCCTACCGCGCCATCCCCATTGCTTGGGACTGGGAGCTAGGCACCCAAGGAGGGAGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000008094.10
3UTR CCA 90 bp TCCGACCCCTCCCTCCTTGGGTGCCTAGCTCCCAGTCCCAAGCAATaGGGATGGCGCGGTAGGGTCTCCCAGGACAGGATAGGAGCCCTT +
Preference number: 1 (lower is better)
Translates to: SDPSLLGCLAPSPKQ*GWRGRVSQDRIGAL
Trigger: AAGGGCTCCTATCCTGTCCTGGGAGACCCTACCGCGCCATCCCCATTGCTTGGGACTGGGAGCTAGGCACCCAAGGAGGGAGGGGTCGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008094.10
3UTR-3UTR TCA 90 bp GGGGAAGACCGAGTGGGATGGCAGCCCGCGCGCTGCAGCTTCAGGGACTCGGGGAGCTGCCCTGGGCACTaGGTCTCCAACACTGACTGT +
Preference number: 2 (lower is better)
Translates to: GEDRVGWQPARCSFRDSGSCPGH*VSNTDC
Trigger: ACAGTCAGTGTTGGAGACTCAGTGCCCAGGGCAGCT...CCCCGAGTCCCTGAAGCTGCAGCGCGCGGGCTGCCATCCCACTCGGTCTTCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000008094.10
3UTR-3UTR GCA 90 bp GGATGGCGCGGTAGGGTCTCCCAGGACAGGATAGGAGCCCTTCCCCAGGATTCTGTTCGCTCTGGGGCATaGCCAGGCCCCGCCCATCGG +
Preference number: 2 (lower is better)
Translates to: GWRGRVSQDRIGALPQDSVRSGA*PGPAHR
Trigger: CCGATGGGCGGGGCCTGGGCATGCCCCAGAGCGAAC...AGAATCCTGGGGAAGGGCTCCTATCCTGTCCTGGGAGACCCTACCGCGCCATCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000008094.10
3UTR CCA 72 bp GGAATGGAGCACAGCGGAGGGGAAGACCGAGTGGGATaGCAGCCCGCGCGCTGCAGCTTCAGGGACTCGGGG +
Preference number: 3 (lower is better)
Translates to: GMEHSGGEDRVG*QPARCSFRDSG
Trigger: CCCCGAGTCCCTGAAGCTGCAGCGCGCGGGCTGCCATCCCACTCGGTCTTCCCCTCCGCTGTGCTCCATTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008094.10
3UTR CCA 72 bp AGTGCGGAATGGAGCACAGCGGAGGGGAAGACCGAGTaGGATGGCAGCCCGCGCGCTGCAGCTTCAGGGACT +
Preference number: 3 (lower is better)
Translates to: SAEWSTAEGKTE*DGSPRAAASGT
Trigger: AGTCCCTGAAGCTGCAGCGCGCGGGCTGCCATCCCACTCGGTCTTCCCCTCCGCTGTGCTCCATTCCGCACT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008094.10
3UTR CCA 72 bp CTTGGGTGCCTAGCTCCCAGTCCCAAGCAATGGGGATaGCGCGGTAGGGTCTCCCAGGACAGGATAGGAGCC +
Preference number: 3 (lower is better)
Translates to: LGCLAPSPKQWG*RGRVSQDRIGA
Trigger: GGCTCCTATCCTGTCCTGGGAGACCCTACCGCGCCATCCCCATTGCTTGGGACTGGGAGCTAGGCACCCAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008094.10
3UTR GCA 72 bp GAGCCCTTCCCCAGGATTCTCCTTAGGGCTTCCCAGTaGGGAATGGAGCACAGCGGAGGGGAAGACCGAGTG +
Preference number: 3 (lower is better)
Translates to: EPFPRILLRASQ*GMEHSGGEDRV
Trigger: CACTCGGTCTTCCCCTCCGCTGTGCTCCATTCCGCACTGGGAAGCCCTAAGGAGAATCCTGGGGAAGGGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000008094.10
3UTR CCA 72 bp TCCCTCCTTGGGTGCCTAGCTCCCAGTCCCAAGCAATaGGGATGGCGCGGTAGGGTCTCCCAGGACAGGATA +
Preference number: 3 (lower is better)
Translates to: SLLGCLAPSPKQ*GWRGRVSQDRI
Trigger: TATCCTGTCCTGGGAGACCCTACCGCGCCATCCCCATTGCTTGGGACTGGGAGCTAGGCACCCAAGGAGGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008094.10
CDS-3UTR CCA 90 bp CCCAGTGCGGAATGGAGCACAGCGGAGGGGAAGACCGAGTGGGATGGCAGCCCGCCTGCGGCGCAGAGCTaGCTCCATGGCCCGCCAGGT +
Preference number: 4 (lower is better)
Translates to: PSAEWSTAEGKTEWDGSPPAAQS*LHGPPG
Trigger: ACCTGGCGGGCCATGGAGCCAGCTCTGCGCCGCAGG...CGGGCTGCCATCCCACTCGGTCTTCCCCTCCGCTGTGCTCCATTCCGCACTGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008094.10
CDS-3UTR GCA 90 bp CCAACACTGACTGTGCCTGGTTCGCTCTGGGGCATGCCCAGGCCCCGCCCATCGGAGCCACTGCGGCCTTaGAGGTCGGCACGAGGCGCT +
Preference number: 4 (lower is better)
Translates to: PTLTVPGSLWGMPRPRPSEPLRP*RSARGA
Trigger: AGCGCCTCGTGCCGACCTGCAAGGCCGCAGTGGCTC...CGATGGGCGGGGCCTGGGCATGCCCCAGAGCGAACCAGGCACAGTCAGTGTTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000008094.10
CDS-3UTR TCA 90 bp CGCGCGCTGCAGCTTCAGGGACTCGGGGAGGCAGGGAGGGGGCTCTGTACAAGGCGTTGCGGTACACTGTaGTACGGCGCTGGCAGCGCA +
Preference number: 4 (lower is better)
Translates to: RALQLQGLGEAGRGLCTRRCGTL*YGAGSA
Trigger: TGCGCTGCCAGCGCCGTATCACAGTGTACCGCAACG...CCTTGTACAGAGCCCCCTCCCTGCCTCCCCGAGTCCCTGAAGCTGCAGCGCGCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000008094.10
CDS-3UTR TCA 90 bp CAGTGCGGAATGGAGCACAGCGGAGGGGAAGACCGAGTGGGATGGCAGCCCGCGGGGCAAAGCCGGCCTTaGGGAAACTCCAGGCCAGGC +
Preference number: 4 (lower is better)
Translates to: QCGMEHSGGEDRVGWQPAGQSRP*GNSRPG
Trigger: GCCTGGCCTGGAGTTTCCTCAAGGCCGGCTTTGCCC...CGCGGGCTGCCATCCCACTCGGTCTTCCCCTCCGCTGTGCTCCATTCCGCACTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000008094.10
CDS-3UTR GCA 90 bp CCCAGTGCGGAATGGAGCACAGCGGAGGGGAAGACCGAGTGGGATGGCAGCCCGGCCCGCCAGGTCAGGTaGCACCACCTCATAGCCGAG +
Preference number: 4 (lower is better)
Translates to: PSAEWSTAEGKTEWDGSPARQVR*HHLIAE
Trigger: CTCGGCTATGAGGTGGTGGCACCTGACCTGGCGGGC...CGGGCTGCCATCCCACTCGGTCTTCCCCTCCGCTGTGCTCCATTCCGCACTGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008094.10
CDS-3UTR CCA 90 bp GGCTCCGACCCCTCCCTCCTTGGGTGCCTAGCTCCCAGTCCCAAGCAATGGGGAGCAGAGCTGGCTCCATaGCCCGCCAGGTCAGGTGCC +
Preference number: 4 (lower is better)
Translates to: GSDPSLLGCLAPSPKQWGAELAP*PARSGA
Trigger: GGCACCTGACCTGGCGGGCCATGGAGCCAGCTCTGC...TCCCCATTGCTTGGGACTGGGAGCTAGGCACCCAAGGAGGGAGGGGTCGGAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000008094.10
CDS-3UTR CCA 90 bp GATGGCAGCCCGCGCGCTGCAGCTTCAGGGACTCGGGGAGGCAGGGAGGGGGCTCCTTCAGGCCAATACTaGCCACTCATCATGGCCCGC +
Preference number: 4 (lower is better)
Translates to: DGSPRAAASGTRGGREGAPSGQY*PLIMAR
Trigger: GCGGGCCATGATGAGTGGCCAGTATTGGCCTGAAGG...AGCCCCCTCCCTGCCTCCCCGAGTCCCTGAAGCTGCAGCGCGCGGGCTGCCATC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000008094.10
CDS-3UTR CCA 90 bp CGCGCTGCAGCTTCAGGGACTCGGGGAGGCAGGGAGGGGGCTCTGTACAAGGTCCCCTGGAGCCGGCTCTaGCTGCAGCAGCTGTGGCTT +
Preference number: 4 (lower is better)
Translates to: RAAASGTRGGREGALYKVPWSRL*LQQLWL
Trigger: AAGCCACAGCTGCTGCAGCCAGAGCCGGCTCCAGGG...GACCTTGTACAGAGCCCCCTCCCTGCCTCCCCGAGTCCCTGAAGCTGCAGCGCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000008094.10
CDS-3UTR GCA 90 bp GGAATGGAGCACAGCGGAGGGGAAGACCGAGTGGGATGGCAGCCCGCGCGCTGCAGCACCACATCAGCCTaGGCACCCTTGCAGCTGGTG +
Preference number: 4 (lower is better)
Translates to: GMEHSGGEDRVGWQPARCSTTSA*APLQLV
Trigger: CACCAGCTGCAAGGGTGCGCAGGCTGATGTGGTGCT...GCAGCGCGCGGGCTGCCATCCCACTCGGTCTTCCCCTCCGCTGTGCTCCATTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008094.10
CDS-3UTR CCA 90 bp CGCGCTGCAGCTTCAGGGACTCGGGGAGGCAGGGAGGGGGCTCTGTACAAGGTCATCTTCAGGAGGTGGTaGTGGCGGCGTGGGGATGGG +
Preference number: 4 (lower is better)
Translates to: RAAASGTRGGREGALYKVIFRRW*WRRGDG
Trigger: CCCATCCCCACGCCGCCACCACCACCTCCTGAAGAT...GACCTTGTACAGAGCCCCCTCCCTGCCTCCCCGAGTCCCTGAAGCTGCAGCGCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000008094.10
CDS-3UTR CCA 90 bp TCGGGGAGGCAGGGAGGGGGCTCTGTACAAGGTCACACCCTTCGGTCGCGCGTGTCACTTCTCCTCCCCTaGAGCCGGCTCTGGCTGCAG +
Preference number: 4 (lower is better)
Translates to: SGRQGGGSVQGHTLRSRVSLLLP*SRLWLQ
Trigger: CTGCAGCCAGAGCCGGCTCCAGGGGAGGAGAAGTGA...CACGCGCGACCGAAGGGTGTGACCTTGTACAGAGCCCCCTCCCTGCCTCCCCGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000008094.10
CDS-3UTR TCA 90 bp GCGCGCTGCAGCTTCAGGGACTCGGGGAGGCAGGGAGGGGGCTCTGTACAAGGTCACCCTTGCAGCTGGTaGTGCGCTGCTCACAGTCGA +
Preference number: 4 (lower is better)
Translates to: ARCSFRDSGRQGGGSVQGHPCSW*CAAHSR
Trigger: TCGACTGTGAGCAGCGCATCACCAGCTGCAAGGGTG...ACCTTGTACAGAGCCCCCTCCCTGCCTCCCCGAGTCCCTGAAGCTGCAGCGCGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000008094.10
CDS-3UTR TCA 90 bp TGCGGGGATTTGTGGCTCCGACCCCTCCCTCCTTGGGTGCCTAGCTCCCAGTCCCCAGGCCAGGCAAGGTaGCAGGCAGTGCAGGACACA +
Preference number: 4 (lower is better)
Translates to: CGDLWLRPLPPWVPSSQSPGQAR*QAVQDT
Trigger: TGTGTCCTGCACTGCCTGTCACCTTGCCTGGCCTGG...GGACTGGGAGCTAGGCACCCAAGGAGGGAGGGGTCGGAGCCACAAATCCCCGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000008094.10
CDS-3UTR GCA 90 bp GGGGAAGACCGAGTGGGATGGCAGCCCGCGCGCTGCAGCTTCAGGGACTCGGGGCAAGGTGACAGGCAGTaGAGGACACATGTGGGCATG +
Preference number: 4 (lower is better)
Translates to: GEDRVGWQPARCSFRDSGQGDRQ*RTHVGM
Trigger: CATGCCCACATGTGTCCTGCACTGCCTGTCACCTTG...CCCCGAGTCCCTGAAGCTGCAGCGCGCGGGCTGCCATCCCACTCGGTCTTCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000008094.10
CDS-3UTR CCA 90 bp GCGCTGCAGCTTCAGGGACTCGGGGAGGCAGGGAGGGGGCTCTGTACAAGGTCAAGATGGAGCATAGGCTaGGCTCCAGTGCCGTGGGGC +
Preference number: 4 (lower is better)
Translates to: ALQLQGLGEAGRGLCTRSRWSIG*APVPWG
Trigger: GCCCCACGGCACTGGAGCCCAGCCTATGCTCCATCT...TGACCTTGTACAGAGCCCCCTCCCTGCCTCCCCGAGTCCCTGAAGCTGCAGCGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000008094.10
CDS-3UTR CCA 90 bp CGCGCTGCAGCTTCAGGGACTCGGGGAGGCAGGGAGGGGGCTCTGTACAAGGTCTGGCTGCAGCAGCTGTaGCTTGGGCTTTGGCTCGAG +
Preference number: 4 (lower is better)
Translates to: RAAASGTRGGREGALYKVWLQQL*LGLWLE
Trigger: CTCGAGCCAAAGCCCAAGCCACAGCTGCTGCAGCCA...GACCTTGTACAGAGCCCCCTCCCTGCCTCCCCGAGTCCCTGAAGCTGCAGCGCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000008094.10
CDS-3UTR TCA 90 bp GGGGAAGACCGAGTGGGATGGCAGCCCGCGCGCTGCAGCTTCAGGGACTCGGGGCACCGACTCCGTGAATaGAGAACAGCACCACATCAG +
Preference number: 4 (lower is better)
Translates to: GEDRVGWQPARCSFRDSGHRLRE*RTAPHQ
Trigger: CTGATGTGGTGCTGTTCTTCATTCACGGAGTCGGTG...CCCCGAGTCCCTGAAGCTGCAGCGCGCGGGCTGCCATCCCACTCGGTCTTCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000008094.10
CDS-3UTR CCA 90 bp CCAGGATTCTCCTTAGGGCTTCCCAGTGCGGAATGGAGCACAGCGGAGGGGAAGTTCAGGAGGTGGTGGTaGCGGCGTGGGGATGGGCGC +
Preference number: 4 (lower is better)
Translates to: PGFSLGLPSAEWSTAEGKFRRWW*RRGDGR
Trigger: GCGCCCATCCCCACGCCGCCACCACCACCTCCTGAA...CTTCCCCTCCGCTGTGCTCCATTCCGCACTGGGAAGCCCTAAGGAGAATCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000008094.10
CDS-3UTR CCA 90 bp CAGTGCGGAATGGAGCACAGCGGAGGGGAAGACCGAGTGGGATGGCAGCCCGCGATCATCTTCAGGAGGTaGTGGTGGCGGCGTGGGGAT +
Preference number: 4 (lower is better)
Translates to: QCGMEHSGGEDRVGWQPAIIFRR*WWRRGD
Trigger: ATCCCCACGCCGCCACCACCACCTCCTGAAGATGAT...CGCGGGCTGCCATCCCACTCGGTCTTCCCCTCCGCTGTGCTCCATTCCGCACTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000008094.10
CDS-3UTR CCA 90 bp GGGACTCGGGGAGGCAGGGAGGGGGCTCTGTACAAGGTCACACCCTTCGGTCGCGCAGCTGCTTTTCTTTaGCCCCTTGGCGGGCAAAGC +
Preference number: 4 (lower is better)
Translates to: GTRGGREGALYKVTPFGRAAAFL*PLGGQS
Trigger: GCTTTGCCCGCCAAGGGGCCAAAGAAAAGCAGCTGC...GCGACCGAAGGGTGTGACCTTGTACAGAGCCCCCTCCCTGCCTCCCCGAGTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000008094.10
CDS-3UTR CCA 90 bp GGGACTCGGGGAGGCAGGGAGGGGGCTCTGTACAAGGTCACACCCTTCGGTCGCCTTTGGCTCGAGCTTTaGCTCAGCCTCGGGTTCTGG +
Preference number: 4 (lower is better)
Translates to: GTRGGREGALYKVTPFGRLWLEL*LSLGFW
Trigger: CCAGAACCCGAGGCTGAGCCAAAGCTCGAGCCAAAG...GCGACCGAAGGGTGTGACCTTGTACAGAGCCCCCTCCCTGCCTCCCCGAGTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000008094.10
CDS-3UTR TCA 90 bp CCCAGTGCGGAATGGAGCACAGCGGAGGGGAAGACCGAGTGGGATGGCAGCCCGGAGCCACCGACTCCGTaGATGAAGAACAGCACCACA +
Preference number: 4 (lower is better)
Translates to: PSAEWSTAEGKTEWDGSPEPPTP*MKNSTT
Trigger: TGTGGTGCTGTTCTTCATTCACGGAGTCGGTGGCTC...CGGGCTGCCATCCCACTCGGTCTTCCCCTCCGCTGTGCTCCATTCCGCACTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008094.10
CDS-3UTR GCA 90 bp CCAGGATTCTCCTTAGGGCTTCCCAGTGCGGAATGGAGCACAGCGGAGGGGAAGCCGGGTGTCTCCTCCTaGGGGCTCAGCCAGCTCAAC +
Preference number: 4 (lower is better)
Translates to: PGFSLGLPSAEWSTAEGKPGVSS*GLSQLN
Trigger: GTTGAGCTGGCTGAGCCCGCAGGAGGAGACACCCGG...CTTCCCCTCCGCTGTGCTCCATTCCGCACTGGGAAGCCCTAAGGAGAATCCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000008094.10
CDS-3UTR GCA 90 bp ATTCTCCTTAGGGCTTCCCAGTGCGGAATGGAGCACAGCGGAGGGGAAGACCGAGGAGCCGGCTCTGGCTaGAGCAGCTGTGGCTTGGGC +
Preference number: 4 (lower is better)
Translates to: ILLRASQCGMEHSGGEDRGAGSG*SSCGLG
Trigger: GCCCAAGCCACAGCTGCTGCAGCCAGAGCCGGCTCC...TCGGTCTTCCCCTCCGCTGTGCTCCATTCCGCACTGGGAAGCCCTAAGGAGAAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008094.10
CDS-3UTR CCA 90 bp GGCTCCGACCCCTCCCTCCTTGGGTGCCTAGCTCCCAGTCCCAAGCAATGGGGAGCAGCAGCTGTGGCTTaGGCTTTGGCTCGAGCTTTG +
Preference number: 4 (lower is better)
Translates to: GSDPSLLGCLAPSPKQWGAAAVA*ALARAL
Trigger: CAAAGCTCGAGCCAAAGCCCAAGCCACAGCTGCTGC...TCCCCATTGCTTGGGACTGGGAGCTAGGCACCCAAGGAGGGAGGGGTCGGAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000008094.10
CDS-3UTR GCA 90 bp GATTTGTGGCTCCGACCCCTCCCTCCTTGGGTGCCTAGCTCCCAGTCCCAAGCAAAAGGTGTAGGCAGCTaGCACCTGCGGCGCAGAGCT +
Preference number: 4 (lower is better)
Translates to: DLWLRPLPPWVPSSQSQAKGVGS*HLRRRA
Trigger: AGCTCTGCGCCGCAGGTGGCAGCTGCCTACACCTTT...TGCTTGGGACTGGGAGCTAGGCACCCAAGGAGGGAGGGGTCGGAGCCACAAATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000008094.10
CDS-3UTR GCA 90 bp CTCCTTGGGTGCCTAGCTCCCAGTCCCAAGCAATGGGGATGGCGCGGTAGGGTCCAGCTGGTGATGCGCTaGTCACAGTCGATGTGGATG +
Preference number: 4 (lower is better)
Translates to: LLGCLAPSPKQWGWRGRVQLVMR*SQSMWM
Trigger: CATCCACATCGACTGTGAGCAGCGCATCACCAGCTG...GACCCTACCGCGCCATCCCCATTGCTTGGGACTGGGAGCTAGGCACCCAAGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008094.10
CDS-3UTR GCA 90 bp CGCGCGCTGCAGCTTCAGGGACTCGGGGAGGCAGGGAGGGGGCTCTGTACAAGGACAAAGAAGTCTAGCTaGTCCTTCCAGATGGCGAGT +
Preference number: 4 (lower is better)
Translates to: RALQLQGLGEAGRGLCTRTKKSS*SFQMAS
Trigger: ACTCGCCATCTGGAAGGAGCAGCTAGACTTCTTTGT...CCTTGTACAGAGCCCCCTCCCTGCCTCCCCGAGTCCCTGAAGCTGCAGCGCGCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000008094.10
CDS-3UTR CCA 90 bp CTCCTTGGGTGCCTAGCTCCCAGTCCCAAGCAATGGGGATGGCGCGGTAGGGTCTGCTCACAGTCGATGTaGATGGTCCTCTTCGGACGC +
Preference number: 4 (lower is better)
Translates to: LLGCLAPSPKQWGWRGRVCSQSM*MVLFGR
Trigger: GCGTCCGAAGAGGACCATCCACATCGACTGTGAGCA...GACCCTACCGCGCCATCCCCATTGCTTGGGACTGGGAGCTAGGCACCCAAGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008094.10
CDS-3UTR CCA 90 bp CCAGGATTCTCCTTAGGGCTTCCCAGTGCGGAATGGAGCACAGCGGAGGGGAAGGCTGCTCCTTCCAGATaGCGAGTGAGCCACCGACTC +
Preference number: 4 (lower is better)
Translates to: PGFSLGLPSAEWSTAEGKAAPSR*RVSHRL
Trigger: GAGTCGGTGGCTCACTCGCCATCTGGAAGGAGCAGC...CTTCCCCTCCGCTGTGCTCCATTCCGCACTGGGAAGCCCTAAGGAGAATCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008094.10
CDS-3UTR TCA 90 bp TGCGGGGATTTGTGGCTCCGACCCCTCCCTCCTTGGGTGCCTAGCTCCCAGTCCTCTTGGCATAGCGTGTaGAGATGGCCCTCATATCCT +
Preference number: 4 (lower is better)
Translates to: CGDLWLRPLPPWVPSSQSSWHSV*RWPSYP
Trigger: AGGATATGAGGGCCATCTTCACACGCTATGCCAAGA...GGACTGGGAGCTAGGCACCCAAGGAGGGAGGGGTCGGAGCCACAAATCCCCGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000008094.10
CDS-3UTR TCA 90 bp CTCCTTGGGTGCCTAGCTCCCAGTCCCAAGCAATGGGGATGGCGCGGTAGGGTCCGAAGGAGGACACATTaGACGCATTGCCCTCCTTCA +
Preference number: 4 (lower is better)
Translates to: LLGCLAPSPKQWGWRGRVRRRTH*THCPPS
Trigger: TGAAGGAGGGCAATGCGTTCAATGTGTCCTCCTTCG...GACCCTACCGCGCCATCCCCATTGCTTGGGACTGGGAGCTAGGCACCCAAGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008094.10
CDS-3UTR GCA 90 bp TTGTGGCTCCGACCCCTCCCTCCTTGGGTGCCTAGCTCCCAGTCCCAAGCAATGGCAGGATCTCAGCCATaGGTTGGTCCTCTTCCACTG +
Preference number: 4 (lower is better)
Translates to: LWLRPLPPWVPSSQSQAMAGSQP*VGPLPL
Trigger: CAGTGGAAGAGGACCAACGCATGGCTGAGATCCTGC...CATTGCTTGGGACTGGGAGCTAGGCACCCAAGGAGGGAGGGGTCGGAGCCACAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008094.10
CDS-3UTR CCA 90 bp GCGCTGCAGCTTCAGGGACTCGGGGAGGCAGGGAGGGGGCTCTGTACAAGGTCAAGATCTGGGTACTCGTaGGCCAGGAAAGTACAGAAG +
Preference number: 4 (lower is better)
Translates to: ALQLQGLGEAGRGLCTRSRSGYS*ARKVQK
Trigger: CTTCTGTACTTTCCTGGCCCACGAGTACCCAGATCT...TGACCTTGTACAGAGCCCCCTCCCTGCCTCCCCGAGTCCCTGAAGCTGCAGCGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000008094.10
CDS-3UTR TCA 90 bp GATTTGTGGCTCCGACCCCTCCCTCCTTGGGTGCCTAGCTCCCAGTCCCAAGCACACATGTGGGCATGTTaGAGATGGAGCATAGGCTGG +
Preference number: 4 (lower is better)
Translates to: DLWLRPLPPWVPSSQSQAHMWAC*RWSIGW
Trigger: CCAGCCTATGCTCCATCTTCAACATGCCCACATGTG...TGCTTGGGACTGGGAGCTAGGCACCCAAGGAGGGAGGGGTCGGAGCCACAAATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008094.10
CDS-3UTR GCA 90 bp ACGCCCAGTCTAAGAGCCTCTACTACTCAAGATCCAGGAGTCCCTGCGCCGCTGTTGTCGTGCATGCCGTaGACTAGCAGCACGGGTACC +
Preference number: 4 (lower is better)
Translates to: TPSLRASTTQDPGVPAPLLSCMP*TSSTGT
Trigger: GGTACCCGTGCTGCTAGTGCACGGCATGCACGACAA...CAGCGGCGCAGGGACTCCTGGATCTTGAGTAGTAGAGGCTCTTAGACTGGGCGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008094.10
CDS-3UTR CCA 90 bp TTGTGGCTCCGACCCCTCCCTCCTTGGGTGCCTAGCTCCCAGTCCCAAGCAATGATCTCAGCCATGCGTTaGTCCTCTTCCACTGGCACA +
Preference number: 4 (lower is better)
Translates to: LWLRPLPPWVPSSQSQAMISAMR*SSSTGT
Trigger: TGTGCCAGTGGAAGAGGACCAACGCATGGCTGAGAT...CATTGCTTGGGACTGGGAGCTAGGCACCCAAGGAGGGAGGGGTCGGAGCCACAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008094.10
CDS GCA 90 bp TGTGGATGGTCCTCTTCGGACGCCGTGGGCGGCGCCGTCGCCCGCTaGCTGGGTTGGCCCGGGTGTCTCCTCCTGCGGGCTCAGCCAGCT +
Preference number: 5 (lower is better)
Translates to: CGWSSSDAVGGAVAR*LGWPGCLLLRAQPA
Trigger: AGCTGGCTGAGCCCGCAGGAGGAGACACCCGGGCCAACCCAGGCAGCGGGCGACGGCGCCGCCCACGGCGTCCGAAGAGGACCATCCACA
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008094.10
CDS CCA 90 bp TCCTCTTCGGACGCCGTGGGCGGCGCCGTCGCCCGCTGCCTGGGTTaGCCCGGGTGTCTCCTCCTGCGGGCTCAGCCAGCTCAACCTCGA +
Preference number: 5 (lower is better)
Translates to: SSSDAVGGAVARCLG*PGCLLLRAQPAQPR
Trigger: TCGAGGTTGAGCTGGCTGAGCCCGCAGGAGGAGACACCCGGGCCAACCCAGGCAGCGGGCGACGGCGCCGCCCACGGCGTCCGAAGAGGA
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008094.10
CDS CCA 90 bp GATGGTCCTCTTCGGACGCCGTGGGCGGCGCCGTCGCCCGCTGCCTaGGTTGGCCCGGGTGTCTCCTCCTGCGGGCTCAGCCAGCTCAAC +
Preference number: 5 (lower is better)
Translates to: DGPLRTPWAAPSPAA*VGPGVSSCGLSQLN
Trigger: GTTGAGCTGGCTGAGCCCGCAGGAGGAGACACCCGGGCCAACCCAGGCAGCGGGCGACGGCGCCGCCCACGGCGTCCGAAGAGGACCATC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008094.10
CDS GCA 90 bp TCAACCTCGAGTGCAGCAGGCGGGTCCCCGGAGCCACTGCGGCCTTaGAGGTCGGCACGAGGCGCTCGGCCCAGGTTCTCCACCACCAGC +
Preference number: 5 (lower is better)
Translates to: STSSAAGGSPEPLRP*RSARGARPRFSTTS
Trigger: GCTGGTGGTGGAGAACCTGGGCCGAGCGCCTCGTGCCGACCTGCAAGGCCGCAGTGGCTCCGGGGACCCGCCTGCTGCACTCGAGGTTGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008094.10
CDS GCA 90 bp CAGCCAGCTCAACCTCGAGTGCAGCAGGCGGGTCCCCGGAGCCACTaGGGCCTTGCAGGTCGGCACGAGGCGCTCGGCCCAGGTTCTCCA +
Preference number: 5 (lower is better)
Translates to: QPAQPRVQQAGPRSH*GLAGRHEALGPGSP
Trigger: TGGAGAACCTGGGCCGAGCGCCTCGTGCCGACCTGCAAGGCCGCAGTGGCTCCGGGGACCCGCCTGCTGCACTCGAGGTTGAGCTGGCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008094.10
CDS-3UTR CAA 90 bp CGCGCTGCAGCTTCAGGGACTCGGGGAGGCAGGGAGGGGGCTCTGTACAAGGTCCGCCCGCTGCCTGGGTaGGCCCGGGTGTCTCCTCCT +
Preference number: 5 (lower is better)
Translates to: RAAASGTRGGREGALYKVRPLPG*ARVSPP
Trigger: AGGAGGAGACACCCGGGCCAACCCAGGCAGCGGGCG...GACCTTGTACAGAGCCCCCTCCCTGCCTCCCCGAGTCCCTGAAGCTGCAGCGCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000008094.10
CDS-3UTR CAA 90 bp GCCCATCGGCATGAGGCCCCGCCCAGCCAGCCCACGCCCAGTCTAAGAGCCTCTCGGGCAAAGCCGGCCTaGAGGAAACTCCAGGCCAGG +
Preference number: 5 (lower is better)
Translates to: AHRHEAPPSQPTPSLRASRAKPA*RKLQAR
Trigger: CCTGGCCTGGAGTTTCCTCAAGGCCGGCTTTGCCCG...AGAGGCTCTTAGACTGGGCGTGGGCTGGCTGGGCGGGGCCTCATGCCGATGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008094.10
CDS-3UTR CAA 90 bp GTGGGATGGCAGCCCGCGCGCTGCAGCTTCAGGGACTCGGGGAGGCAGGGAGGGGATCTCAGCCATGCGTaGGTCCTCTTCCACTGGCAC +
Preference number: 5 (lower is better)
Translates to: VGWQPARCSFRDSGRQGGDLSHA*VLFHWH
Trigger: GTGCCAGTGGAAGAGGACCAACGCATGGCTGAGATC...CCCTCCCTGCCTCCCCGAGTCCCTGAAGCTGCAGCGCGCGGGCTGCCATCCCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000008094.10
CDS CCA 90 bp GGGGATGGGCGCGGGCCCCGCATGCTTTACCCGCAGCACCCGGCCTaGCTTGACCTCCACGAATGTGTAGCCGTCACTGGACTCGACACT +
Preference number: 5 (lower is better)
Translates to: GDGRGPRMLYPQHPA*LDLHECVAVTGLDT
Trigger: AGTGTCGAGTCCAGTGACGGCTACACATTCGTGGAGGTCAAGCCAGGCCGGGTGCTGCGGGTAAAGCATGCGGGGCCCGCGCCCATCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000008094.10
CDS CCA 90 bp CACTGTGATACGGCGCTGGCAGCGCACAAGGCCCGTCTTGACCCCTaGATCATCTTCAGGAGGTGGTGGTGGCGGCGTGGGGATGGGCGC +
Preference number: 5 (lower is better)
Translates to: HCDTALAAHKARLDP*IIFRRWWWRRGDGR
Trigger: GCGCCCATCCCCACGCCGCCACCACCACCTCCTGAAGATGATCCAGGGGTCAAGACGGGCCTTGTGCGCTGCCAGCGCCGTATCACAGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000008094.10
CDS CCA 90 bp CTCCCCTGGAGCCGGCTCTGGCTGCAGCAGCTGTGGCTTGGGCTTTaGCTCGAGCTTTGGCTCAGCCTCGGGTTCTGGCTCCCACAGCAG +
Preference number: 5 (lower is better)
Translates to: LPWSRLWLQQLWLGL*LELWLSLGFWLPQQ
Trigger: CTGCTGTGGGAGCCAGAACCCGAGGCTGAGCCAAAGCTCGAGCCAAAGCCCAAGCCACAGCTGCTGCAGCCAGAGCCGGCTCCAGGGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008094.10
CDS TCA 90 bp TGGGCGCGGGCCCCGCATGCTTTACCCGCAGCACCCGGCCTGGCTTaGCCTCCACGAATGTGTAGCCGTCACTGGACTCGACACTCTCCA +
Preference number: 5 (lower is better)
Translates to: WARAPHALPAAPGLA*PPRMCSRHWTRHSP
Trigger: TGGAGAGTGTCGAGTCCAGTGACGGCTACACATTCGTGGAGGTCAAGCCAGGCCGGGTGCTGCGGGTAAAGCATGCGGGGCCCGCGCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008094.10
CDS CCA 90 bp ACTTCTCCTCCCCTGGAGCCGGCTCTGGCTGCAGCAGCTGTGGCTTaGGCTTTGGCTCGAGCTTTGGCTCAGCCTCGGGTTCTGGCTCCC +
Preference number: 5 (lower is better)
Translates to: TSPPLEPALAAAAVA*ALARALAQPRVLAP
Trigger: GGGAGCCAGAACCCGAGGCTGAGCCAAAGCTCGAGCCAAAGCCCAAGCCACAGCTGCTGCAGCCAGAGCCGGCTCCAGGGGAGGAGAAGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008094.10
CDS-3UTR CAA 90 bp GGGACTCGGGGAGGCAGGGAGGGGGCTCTGTACAAGGTCACACCCTTCGGTCGCCTTTTCTTTGGCCCCTaGGCGGGCAAAGCCGGCCTT +
Preference number: 5 (lower is better)
Translates to: GTRGGREGALYKVTPFGRLFFGP*AGKAGL
Trigger: AAGGCCGGCTTTGCCCGCCAAGGGGCCAAAGAAAAG...GCGACCGAAGGGTGTGACCTTGTACAGAGCCCCCTCCCTGCCTCCCCGAGTCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000008094.10
CDS-3UTR CAA 90 bp GCCCATCGGCATGAGGCCCCGCCCAGCCAGCCCACGCCCAGTCTAAGAGCCTCTAGCAGCTGCTTTTCTTaGGCCCCTTGGCGGGCAAAG +
Preference number: 5 (lower is better)
Translates to: AHRHEAPPSQPTPSLRASSSCFS*APWRAK
Trigger: CTTTGCCCGCCAAGGGGCCAAAGAAAAGCAGCTGCT...AGAGGCTCTTAGACTGGGCGTGGGCTGGCTGGGCGGGGCCTCATGCCGATGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000008094.10
CDS-3UTR CAA 90 bp GGAATGGAGCACAGCGGAGGGGAAGACCGAGTGGGATGGCAGCCCGCGCGCTGCCCTTCCTCGATGAGCTaGAGAAAGGCCAGCAGCAGG +
Preference number: 5 (lower is better)
Translates to: GMEHSGGEDRVGWQPARCPSSMS*RKASSR
Trigger: CCTGCTGCTGGCCTTTCTCAAGCTCATCGAGGAAGG...GCAGCGCGCGGGCTGCCATCCCACTCGGTCTTCCCCTCCGCTGTGCTCCATTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008094.10
CDS-3UTR CAA 90 bp GAAGACCGAGTGGGATGGCAGCCCGCGCGCTGCAGCTTCAGGGACTCGGGGAGGTGCAGCAGCTGTGGCTaGGGCTTTGGCTCGAGCTTT +
Preference number: 5 (lower is better)
Translates to: EDRVGWQPARCSFRDSGRCSSCG*GFGSSF
Trigger: AAAGCTCGAGCCAAAGCCCAAGCCACAGCTGCTGCA...CCTCCCCGAGTCCCTGAAGCTGCAGCGCGCGGGCTGCCATCCCACTCGGTCTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008094.10
CDS CCA 90 bp CCAATGCGTAAAAGGTGTAGGCAGCTGCCACCTGCGGCGCAGAGCTaGCTCCATGGCCCGCCAGGTCAGGTGCCACCACCTCATAGCCGA +
Preference number: 5 (lower is better)
Translates to: PMRKRCRQLPPAAQS*LHGPPGQVPPPHSR
Trigger: TCGGCTATGAGGTGGTGGCACCTGACCTGGCGGGCCATGGAGCCAGCTCTGCGCCGCAGGTGGCAGCTGCCTACACCTTTTACGCATTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008094.10
CDS-3UTR CAA 90 bp TCGGGGAGGCAGGGAGGGGGCTCTGTACAAGGTCACACCCTTCGGTCGCGCGTGCGCACAAGGCCCGTCTaGACCCCTGGATCATCTTCA +
Preference number: 5 (lower is better)
Translates to: SGRQGGGSVQGHTLRSRVRTRPV*TPGSSS
Trigger: TGAAGATGATCCAGGGGTCAAGACGGGCCTTGTGCG...CACGCGCGACCGAAGGGTGTGACCTTGTACAGAGCCCCCTCCCTGCCTCCCCGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000008094.10
CDS-3UTR CAA 90 bp GGGGAAGACCGAGTGGGATGGCAGCCCGCGCGCTGCAGCTTCAGGGACTCGGGGTCCACTGGCACAAATTaGTCGTGCATGCCGTGCACT +
Preference number: 5 (lower is better)
Translates to: GEDRVGWQPARCSFRDSGSTGTN*SCMPCT
Trigger: AGTGCACGGCATGCACGACAAATTTGTGCCAGTGGA...CCCCGAGTCCCTGAAGCTGCAGCGCGCGGGCTGCCATCCCACTCGGTCTTCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000008094.10
CDS TCA 90 bp AGGCCAGGCAAGGTGACAGGCAGTGCAGGACACATGTGGGCATGTTaGAGATGGAGCATAGGCTGGGCTCCAGTGCCGTGGGGCCCCCAC +
Preference number: 5 (lower is better)
Translates to: RPGKVTGSAGHMWAC*RWSIGWAPVPWGPH
Trigger: GTGGGGGCCCCACGGCACTGGAGCCCAGCCTATGCTCCATCTTCAACATGCCCACATGTGTCCTGCACTGCCTGTCACCTTGCCTGGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000008094.10
CDS GCA 90 bp GATGGCCCTCATATCCTCTGCCAATGCGTAAAAGGTGTAGGCAGCTaGCACCTGCGGCGCAGAGCTGGCTCCATGGCCCGCCAGGTCAGG +
Preference number: 5 (lower is better)
Translates to: DGPHILCQCVKGVGS*HLRRRAGSMARQVR
Trigger: CCTGACCTGGCGGGCCATGGAGCCAGCTCTGCGCCGCAGGTGGCAGCTGCCTACACCTTTTACGCATTGGCAGAGGATATGAGGGCCATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008094.10
CDS-3UTR CAA 90 bp CAGTGCGGAATGGAGCACAGCGGAGGGGAAGACCGAGTGGGATGGCAGCCCGCGGTGGGGCCCCCACCGTaGATCATGATCACTTTGTGT +
Preference number: 5 (lower is better)
Translates to: QCGMEHSGGEDRVGWQPAVGPPP*IMITLC
Trigger: ACACAAAGTGATCATGATCAACGGTGGGGGCCCCAC...CGCGGGCTGCCATCCCACTCGGTCTTCCCCTCCGCTGTGCTCCATTCCGCACTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000008094.10
CDS CCA 90 bp GACCTCCACGAATGTGTAGCCGTCACTGGACTCGACACTCTCCAGTaGCCGCACGGCGTTAGGGGGAGTCCCCAGCAGGCAGCAGAAAAA +
Preference number: 5 (lower is better)
Translates to: DLHECVAVTGLDTLQ*PHGVRGSPQQAAEK
Trigger: TTTTTCTGCTGCCTGCTGGGGACTCCCCCTAACGCCGTGCGGCCACTGGAGAGTGTCGAGTCCAGTGACGGCTACACATTCGTGGAGGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000008094.10
CDS CCA 90 bp TTCTCCACCACCAGCCTCCCGTTGCGGTACACTGTGATACGGCGCTaGCAGCGCACAAGGCCCGTCTTGACCCCTGGATCATCTTCAGGA +
Preference number: 5 (lower is better)
Translates to: FSTTSLPLRYTVIRR*QRTRPVLTPGSSSG
Trigger: TCCTGAAGATGATCCAGGGGTCAAGACGGGCCTTGTGCGCTGCCAGCGCCGTATCACAGTGTACCGCAACGGGAGGCTGGTGGTGGAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008094.10
CDS-3UTR CAA 90 bp TGCGGGGATTTGTGGCTCCGACCCCTCCCTCCTTGGGTGCCTAGCTCCCAGTCCACACATGTGGGCATGTaGAAGATGGAGCATAGGCTG +
Preference number: 5 (lower is better)
Translates to: CGDLWLRPLPPWVPSSQSTHVGM*KMEHRL
Trigger: CAGCCTATGCTCCATCTTCAACATGCCCACATGTGT...GGACTGGGAGCTAGGCACCCAAGGAGGGAGGGGTCGGAGCCACAAATCCCCGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000008094.10
CDS TCA 90 bp TTGGCGGGCAAAGCCGGCCTTGAGGAAACTCCAGGCCAGGCAAGGTaGCAGGCAGTGCAGGACACATGTGGGCATGTTGAAGATGGAGCA +
Preference number: 5 (lower is better)
Translates to: LAGKAGLEETPGQAR*QAVQDTCGHVEDGA
Trigger: TGCTCCATCTTCAACATGCCCACATGTGTCCTGCACTGCCTGTCACCTTGCCTGGCCTGGAGTTTCCTCAAGGCCGGCTTTGCCCGCCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008094.10
CDS GCA 90 bp AAGCCGGCCTTGAGGAAACTCCAGGCCAGGCAAGGTGACAGGCAGTaGAGGACACATGTGGGCATGTTGAAGATGGAGCATAGGCTGGGC +
Preference number: 5 (lower is better)
Translates to: KPALRKLQARQGDRQ*RTHVGMLKMEHRLG
Trigger: GCCCAGCCTATGCTCCATCTTCAACATGCCCACATGTGTCCTGCACTGCCTGTCACCTTGCCTGGCCTGGAGTTTCCTCAAGGCCGGCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008094.10
CDS TCA 90 bp CCTCGGGTTCTGGCTCCCACAGCAGGAACTCGTGTAACAGCGTGTTaGCCGTTTCAGGACACTCCAGCATCACCATGTGGCTGCCTTCCT +
Preference number: 5 (lower is better)
Translates to: PRVLAPTAGTRVTAC*PFQDTPASPCGCLP
Trigger: AGGAAGGCAGCCACATGGTGATGCTGGAGTGTCCTGAAACGGTCAACACGCTGTTACACGAGTTCCTGCTGTGGGAGCCAGAACCCGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008094.10
CDS GCA 90 bp CTTCTTGGCATAGCGTGTGAAGATGGCCCTCATATCCTCTGCCAATaGGTAAAAGGTGTAGGCAGCTGCCACCTGCGGCGCAGAGCTGGC +
Preference number: 5 (lower is better)
Translates to: LLGIACEDGPHILCQ*VKGVGSCHLRRRAG
Trigger: GCCAGCTCTGCGCCGCAGGTGGCAGCTGCCTACACCTTTTACGCATTGGCAGAGGATATGAGGGCCATCTTCACACGCTATGCCAAGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008094.10
CDS-3UTR CAA 90 bp ATTCTCCTTAGGGCTTCCCAGTGCGGAATGGAGCACAGCGGAGGGGAAGACCGAGACACATTGAACGCATaGCCCTCCTTCAGCAGCTGC +
Preference number: 5 (lower is better)
Translates to: ILLRASQCGMEHSGGEDRDTLNA*PSFSSC
Trigger: GCAGCTGCTGAAGGAGGGCAATGCGTTCAATGTGTC...TCGGTCTTCCCCTCCGCTGTGCTCCATTCCGCACTGGGAAGCCCTAAGGAGAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008094.10
CDS GCA 90 bp AGCACGAAGGAGGACACATTGAACGCATTGCCCTCCTTCAGCAGCTaGTTTTCTTTGGCCCCTTGGCGGGCAAAGCCGGCCTTGAGGAAA +
Preference number: 5 (lower is better)
Translates to: STKEDTLNALPSFSS*FSLAPWRAKPALRK
Trigger: TTTCCTCAAGGCCGGCTTTGCCCGCCAAGGGGCCAAAGAAAAGCAGCTGCTGAAGGAGGGCAATGCGTTCAATGTGTCCTCCTTCGTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000008094.10
CDS GCA 90 bp ATTGCGCTTCTTGGCATAGCGTGTGAAGATGGCCCTCATATCCTCTaGCAATGCGTAAAAGGTGTAGGCAGCTGCCACCTGCGGCGCAGA +
Preference number: 5 (lower is better)
Translates to: IALLGIACEDGPHIL*QCVKGVGSCHLRRR
Trigger: TCTGCGCCGCAGGTGGCAGCTGCCTACACCTTTTACGCATTGGCAGAGGATATGAGGGCCATCTTCACACGCTATGCCAAGAAGCGCAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008094.10
CDS TCA 90 bp AATACTGGCCACTCATCATGGCCCGCAGCACGAAGGAGGACACATTaGACGCATTGCCCTCCTTCAGCAGCTGCTTTTCTTTGGCCCCTT +
Preference number: 5 (lower is better)
Translates to: NTGHSSWPAARRRTH*THCPPSAAAFLWPL
Trigger: AAGGGGCCAAAGAAAAGCAGCTGCTGAAGGAGGGCAATGCGTTCAATGTGTCCTCCTTCGTGCTGCGGGCCATGATGAGTGGCCAGTATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000008094.10
CDS CCA 90 bp CGTGGGGCCCCCACCGTTGATCATGATCACTTTGTGTACAAGATCTaGGTACTCGTGGGCCAGGAAAGTACAGAAGGAGACACCGTAAGA +
Preference number: 5 (lower is better)
Translates to: RGAPTVDHDHFVYKI*VLVGQESTEGDTVR
Trigger: TCTTACGGTGTCTCCTTCTGTACTTTCCTGGCCCACGAGTACCCAGATCTTGTACACAAAGTGATCATGATCAACGGTGGGGGCCCCACG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000008094.10
CDS CAA 72 bp GGACGCCGTGGGCGGCGCCGTCGCCCGCTGCCTGGGTaGGCCCGGGTGTCTCCTCCTGCGGGCTCAGCCAGC +
Preference number: 6 (lower is better)
Translates to: GRRGRRRRPLPG*ARVSPPAGSAS
Trigger: GCTGGCTGAGCCCGCAGGAGGAGACACCCGGGCCAACCCAGGCAGCGGGCGACGGCGCCGCCCACGGCGTCC
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008094.10
CDS CCA 72 bp CTTCGGACGCCGTGGGCGGCGCCGTCGCCCGCTGCCTaGGTTGGCCCGGGTGTCTCCTCCTGCGGGCTCAGC +
Preference number: 6 (lower is better)
Translates to: LRTPWAAPSPAA*VGPGVSSCGLS
Trigger: GCTGAGCCCGCAGGAGGAGACACCCGGGCCAACCCAGGCAGCGGGCGACGGCGCCGCCCACGGCGTCCGAAG
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008094.10
CDS GCA 72 bp TCCTCTTCGGACGCCGTGGGCGGCGCCGTCGCCCGCTaGCTGGGTTGGCCCGGGTGTCTCCTCCTGCGGGCT +
Preference number: 6 (lower is better)
Translates to: SSSDAVGGAVAR*LGWPGCLLLRA
Trigger: AGCCCGCAGGAGGAGACACCCGGGCCAACCCAGGCAGCGGGCGACGGCGCCGCCCACGGCGTCCGAAGAGGA
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008094.10
CDS GCA 72 bp AGTGCAGCAGGCGGGTCCCCGGAGCCACTGCGGCCTTaGAGGTCGGCACGAGGCGCTCGGCCCAGGTTCTCC +
Preference number: 6 (lower is better)
Translates to: SAAGGSPEPLRP*RSARGARPRFS
Trigger: GGAGAACCTGGGCCGAGCGCCTCGTGCCGACCTGCAAGGCCGCAGTGGCTCCGGGGACCCGCCTGCTGCACT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008094.10
CDS CAA 72 bp GAGTGCAGCAGGCGGGTCCCCGGAGCCACTGCGGCCTaGCAGGTCGGCACGAGGCGCTCGGCCCAGGTTCTC +
Preference number: 6 (lower is better)
Translates to: ECSRRVPGATAA*QVGTRRSAQVL
Trigger: GAGAACCTGGGCCGAGCGCCTCGTGCCGACCTGCAAGGCCGCAGTGGCTCCGGGGACCCGCCTGCTGCACTC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008094.10
CDS CAA 90 bp CTCAACCTCGAGTGCAGCAGGCGGGTCCCCGGAGCCACTGCGGCCTaGCAGGTCGGCACGAGGCGCTCGGCCCAGGTTCTCCACCACCAG +
Preference number: 6 (lower is better)
Translates to: LNLECSRRVPGATAA*QVGTRRSAQVLHHQ
Trigger: CTGGTGGTGGAGAACCTGGGCCGAGCGCCTCGTGCCGACCTGCAAGGCCGCAGTGGCTCCGGGGACCCGCCTGCTGCACTCGAGGTTGAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008094.10
CDS GCA 72 bp TCGCCCGCTGCCTGGGTTGGCCCGGGTGTCTCCTCCTaGGGGCTCAGCCAGCTCAACCTCGAGTGCAGCAGG +
Preference number: 6 (lower is better)
Translates to: SPAAWVGPGVSS*GLSQLNLECSR
Trigger: CCTGCTGCACTCGAGGTTGAGCTGGCTGAGCCCGCAGGAGGAGACACCCGGGCCAACCCAGGCAGCGGGCGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008094.10
CDS CCA 72 bp ACGGCGCTGGCAGCGCACAAGGCCCGTCTTGACCCCTaGATCATCTTCAGGAGGTGGTGGTGGCGGCGTGGG +
Preference number: 6 (lower is better)
Translates to: TALAAHKARLDP*IIFRRWWWRRG
Trigger: CCCACGCCGCCACCACCACCTCCTGAAGATGATCCAGGGGTCAAGACGGGCCTTGTGCGCTGCCAGCGCCGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008094.10
CDS CAA 90 bp CCTCCCCTGGAGCCGGCTCTGGCTGCAGCAGCTGTGGCTTGGGCTTaGGCTCGAGCTTTGGCTCAGCCTCGGGTTCTGGCTCCCACAGCA +
Preference number: 6 (lower is better)
Translates to: PPLEPALAAAAVAWA*ARALAQPRVLAPTA
Trigger: TGCTGTGGGAGCCAGAACCCGAGGCTGAGCCAAAGCTCGAGCCAAAGCCCAAGCCACAGCTGCTGCAGCCAGAGCCGGCTCCAGGGGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008094.10
CDS CCA 72 bp CGCGGGCCCCGCATGCTTTACCCGCAGCACCCGGCCTaGCTTGACCTCCACGAATGTGTAGCCGTCACTGGA +
Preference number: 6 (lower is better)
Translates to: RGPRMLYPQHPA*LDLHECVAVTG
Trigger: TCCAGTGACGGCTACACATTCGTGGAGGTCAAGCCAGGCCGGGTGCTGCGGGTAAAGCATGCGGGGCCCGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008094.10
CDS CCA 72 bp CCCTTGCAGCTGGTGATGCGCTGCTCACAGTCGATGTaGATGGTCCTCTTCGGACGCCGTGGGCGGCGCCGT +
Preference number: 6 (lower is better)
Translates to: PLQLVMRCSQSM*MVLFGRRGRRR
Trigger: ACGGCGCCGCCCACGGCGTCCGAAGAGGACCATCCACATCGACTGTGAGCAGCGCATCACCAGCTGCAAGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008094.10
CDS CCA 72 bp AAAAGGTGTAGGCAGCTGCCACCTGCGGCGCAGAGCTaGCTCCATGGCCCGCCAGGTCAGGTGCCACCACCT +
Preference number: 6 (lower is better)
Translates to: KRCRQLPPAAQS*LHGPPGQVPPP
Trigger: AGGTGGTGGCACCTGACCTGGCGGGCCATGGAGCCAGCTCTGCGCCGCAGGTGGCAGCTGCCTACACCTTTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008094.10
CDS CCA 72 bp CCCCTGGAGCCGGCTCTGGCTGCAGCAGCTGTGGCTTaGGCTTTGGCTCGAGCTTTGGCTCAGCCTCGGGTT +
Preference number: 6 (lower is better)
Translates to: PLEPALAAAAVA*ALARALAQPRV
Trigger: AACCCGAGGCTGAGCCAAAGCTCGAGCCAAAGCCCAAGCCACAGCTGCTGCAGCCAGAGCCGGCTCCAGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008094.10
CDS CCA 72 bp CTCCTCCCCTGGAGCCGGCTCTGGCTGCAGCAGCTGTaGCTTGGGCTTTGGCTCGAGCTTTGGCTCAGCCTC +
Preference number: 6 (lower is better)
Translates to: LLPWSRLWLQQL*LGLWLELWLSL
Trigger: GAGGCTGAGCCAAAGCTCGAGCCAAAGCCCAAGCCACAGCTGCTGCAGCCAGAGCCGGCTCCAGGGGAGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008094.10
CDS CAA 90 bp CACTTCTCCTCCCCTGGAGCCGGCTCTGGCTGCAGCAGCTGTGGCTaGGGCTTTGGCTCGAGCTTTGGCTCAGCCTCGGGTTCTGGCTCC +
Preference number: 6 (lower is better)
Translates to: HFSSPGAGSGCSSCG*GFGSSFGSASGSGS
Trigger: GGAGCCAGAACCCGAGGCTGAGCCAAAGCTCGAGCCAAAGCCCAAGCCACAGCTGCTGCAGCCAGAGCCGGCTCCAGGGGAGGAGAAGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008094.10
CDS GCA 72 bp CGGCGCAGAGCTGGCTCCATGGCCCGCCAGGTCAGGTaGCACCACCTCATAGCCGAGTCGCACAAAGAAGTC +
Preference number: 6 (lower is better)
Translates to: RRRAGSMARQVR*HHLIAESHKEV
Trigger: GACTTCTTTGTGCGACTCGGCTATGAGGTGGTGGCACCTGACCTGGCGGGCCATGGAGCCAGCTCTGCGCCG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008094.10
CDS CCA 72 bp AGCCGGCTCTGGCTGCAGCAGCTGTGGCTTGGGCTTTaGCTCGAGCTTTGGCTCAGCCTCGGGTTCTGGCTC +
Preference number: 6 (lower is better)
Translates to: SRLWLQQLWLGL*LELWLSLGFWL
Trigger: GAGCCAGAACCCGAGGCTGAGCCAAAGCTCGAGCCAAAGCCCAAGCCACAGCTGCTGCAGCCAGAGCCGGCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008094.10
CDS CAA 72 bp GAGCCGGCTCTGGCTGCAGCAGCTGTGGCTTGGGCTTaGGCTCGAGCTTTGGCTCAGCCTCGGGTTCTGGCT +
Preference number: 6 (lower is better)
Translates to: EPALAAAAVAWA*ARALAQPRVLA
Trigger: AGCCAGAACCCGAGGCTGAGCCAAAGCTCGAGCCAAAGCCCAAGCCACAGCTGCTGCAGCCAGAGCCGGCTC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008094.10
CDS TCA 72 bp GCCCCGCATGCTTTACCCGCAGCACCCGGCCTGGCTTaGCCTCCACGAATGTGTAGCCGTCACTGGACTCGA +
Preference number: 6 (lower is better)
Translates to: APHALPAAPGLA*PPRMCSRHWTR
Trigger: TCGAGTCCAGTGACGGCTACACATTCGTGGAGGTCAAGCCAGGCCGGGTGCTGCGGGTAAAGCATGCGGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008094.10
CDS CCA 72 bp GAATGTGTAGCCGTCACTGGACTCGACACTCTCCAGTaGCCGCACGGCGTTAGGGGGAGTCCCCAGCAGGCA +
Preference number: 6 (lower is better)
Translates to: ECVAVTGLDTLQ*PHGVRGSPQQA
Trigger: TGCCTGCTGGGGACTCCCCCTAACGCCGTGCGGCCACTGGAGAGTGTCGAGTCCAGTGACGGCTACACATTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000008094.10
CDS CCA 72 bp ACCAGCCTCCCGTTGCGGTACACTGTGATACGGCGCTaGCAGCGCACAAGGCCCGTCTTGACCCCTGGATCA +
Preference number: 6 (lower is better)
Translates to: TSLPLRYTVIRR*QRTRPVLTPGS
Trigger: TGATCCAGGGGTCAAGACGGGCCTTGTGCGCTGCCAGCGCCGTATCACAGTGTACCGCAACGGGAGGCTGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008094.10
CDS CAA 90 bp CCGGCTCTGGCTGCAGCAGCTGTGGCTTGGGCTTTGGCTCGAGCTTaGGCTCAGCCTCGGGTTCTGGCTCCCACAGCAGGAACTCGTGTA +
Preference number: 6 (lower is better)
Translates to: PALAAAAVAWALARA*AQPRVLAPTAGTRV
Trigger: TACACGAGTTCCTGCTGTGGGAGCCAGAACCCGAGGCTGAGCCAAAGCTCGAGCCAAAGCCCAAGCCACAGCTGCTGCAGCCAGAGCCGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008094.10
CDS GCA 72 bp CATATCCTCTGCCAATGCGTAAAAGGTGTAGGCAGCTaGCACCTGCGGCGCAGAGCTGGCTCCATGGCCCGC +
Preference number: 6 (lower is better)
Translates to: HILCQCVKGVGS*HLRRRAGSMAR
Trigger: GCGGGCCATGGAGCCAGCTCTGCGCCGCAGGTGGCAGCTGCCTACACCTTTTACGCATTGGCAGAGGATATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008094.10
CDS CAA 72 bp ACTGTGATACGGCGCTGGCAGCGCACAAGGCCCGTCTaGACCCCTGGATCATCTTCAGGAGGTGGTGGTGGC +
Preference number: 6 (lower is better)
Translates to: TVIRRWQRTRPV*TPGSSSGGGGG
Trigger: GCCACCACCACCTCCTGAAGATGATCCAGGGGTCAAGACGGGCCTTGTGCGCTGCCAGCGCCGTATCACAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008094.10
CDS CCA 72 bp TTGCCCTCCTTCAGCAGCTGCTTTTCTTTGGCCCCTTaGCGGGCAAAGCCGGCCTTGAGGAAACTCCAGGCC +
Preference number: 6 (lower is better)
Translates to: LPSFSSCFSLAP*RAKPALRKLQA
Trigger: GGCCTGGAGTTTCCTCAAGGCCGGCTTTGCCCGCCAAGGGGCCAAAGAAAAGCAGCTGCTGAAGGAGGGCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000008094.10
CDS TCA 72 bp CCTTCCAGATGGCGAGTGAGCCACCGACTCCGTGAATaGAGAACAGCACCACATCAGCCTGCGCACCCTTGC +
Preference number: 6 (lower is better)
Translates to: PSRWRVSHRLRE*RTAPHQPAHPC
Trigger: GCAAGGGTGCGCAGGCTGATGTGGTGCTGTTCTTCATTCACGGAGTCGGTGGCTCACTCGCCATCTGGAAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008094.10
CDS GCA 72 bp GAGGACACATTGAACGCATTGCCCTCCTTCAGCAGCTaGTTTTCTTTGGCCCCTTGGCGGGCAAAGCCGGCC +
Preference number: 6 (lower is better)
Translates to: EDTLNALPSFSS*FSLAPWRAKPA
Trigger: GGCCGGCTTTGCCCGCCAAGGGGCCAAAGAAAAGCAGCTGCTGAAGGAGGGCAATGCGTTCAATGTGTCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000008094.10
CDS GCA 72 bp TCCTCTTCCACTGGCACAAATTTGTCGTGCATGCCGTaGACTAGCAGCACGGGTACCGTCAGCTCCGCGTGG +
Preference number: 6 (lower is better)
Translates to: SSSTGTNLSCMP*TSSTGTVSSAW
Trigger: CCACGCGGAGCTGACGGTACCCGTGCTGCTAGTGCACGGCATGCACGACAAATTTGTGCCAGTGGAAGAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008094.10
CDS CAA 72 bp ATTGCCCTCCTTCAGCAGCTGCTTTTCTTTGGCCCCTaGGCGGGCAAAGCCGGCCTTGAGGAAACTCCAGGC +
Preference number: 6 (lower is better)
Translates to: IALLQQLLFFGP*AGKAGLEETPG
Trigger: GCCTGGAGTTTCCTCAAGGCCGGCTTTGCCCGCCAAGGGGCCAAAGAAAAGCAGCTGCTGAAGGAGGGCAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000008094.10
CDS CAA 90 bp GAGGACACATTGAACGCATTGCCCTCCTTCAGCAGCTGCTTTTCTTaGGCCCCTTGGCGGGCAAAGCCGGCCTTGAGGAAACTCCAGGCC +
Preference number: 6 (lower is better)
Translates to: EDTLNALPSFSSCFS*APWRAKPALRKLQA
Trigger: GGCCTGGAGTTTCCTCAAGGCCGGCTTTGCCCGCCAAGGGGCCAAAGAAAAGCAGCTGCTGAAGGAGGGCAATGCGTTCAATGTGTCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000008094.10
CDS CAA 90 bp GCCTCGGGTTCTGGCTCCCACAGCAGGAACTCGTGTAACAGCGTGTaGACCGTTTCAGGACACTCCAGCATCACCATGTGGCTGCCTTCC +
Preference number: 6 (lower is better)
Translates to: ASGSGSHSRNSCNSV*TVSGHSSITMWLPS
Trigger: GGAAGGCAGCCACATGGTGATGCTGGAGTGTCCTGAAACGGTCAACACGCTGTTACACGAGTTCCTGCTGTGGGAGCCAGAACCCGAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008094.10
CDS CAA 90 bp AGCAGGATCTCAGCCATGCGTTGGTCCTCTTCCACTGGCACAAATTaGTCGTGCATGCCGTGCACTAGCAGCACGGGTACCGTCAGCTCC +
Preference number: 6 (lower is better)
Translates to: SRISAMRWSSSTGTN*SCMPCTSSTGTVSS
Trigger: GGAGCTGACGGTACCCGTGCTGCTAGTGCACGGCATGCACGACAAATTTGTGCCAGTGGAAGAGGACCAACGCATGGCTGAGATCCTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008094.10
CDS TCA 72 bp AAGGTGACAGGCAGTGCAGGACACATGTGGGCATGTTaGAGATGGAGCATAGGCTGGGCTCCAGTGCCGTGG +
Preference number: 6 (lower is better)
Translates to: KVTGSAGHMWAC*RWSIGWAPVPW
Trigger: CCACGGCACTGGAGCCCAGCCTATGCTCCATCTTCAACATGCCCACATGTGTCCTGCACTGCCTGTCACCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008094.10
CDS GCA 72 bp GTTGGTCCTCTTCCACTGGCACAAATTTGTCGTGCATaGCGTGCACTAGCAGCACGGGTACCGTCAGCTCCG +
Preference number: 6 (lower is better)
Translates to: VGPLPLAQICRA*RALAARVPSAP
Trigger: CGGAGCTGACGGTACCCGTGCTGCTAGTGCACGGCATGCACGACAAATTTGTGCCAGTGGAAGAGGACCAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008094.10
CDS CAA 90 bp CTGGGCTCCAGTGCCGTGGGGCCCCCACCGTTGATCATGATCACTTaGTGTACAAGATCTGGGTACTCGTGGGCCAGGAAAGTACAGAAG +
Preference number: 6 (lower is better)
Translates to: LGSSAVGPPPLIMIT*CTRSGYSWARKVQK
Trigger: CTTCTGTACTTTCCTGGCCCACGAGTACCCAGATCTTGTACACAAAGTGATCATGATCAACGGTGGGGGCCCCACGGCACTGGAGCCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000008094.10
CDS GCA 72 bp ATAGCGTGTGAAGATGGCCCTCATATCCTCTGCCAATaGGTAAAAGGTGTAGGCAGCTGCCACCTGCGGCGC +
Preference number: 6 (lower is better)
Translates to: IACEDGPHILCQ*VKGVGSCHLRR
Trigger: GCGCCGCAGGTGGCAGCTGCCTACACCTTTTACGCATTGGCAGAGGATATGAGGGCCATCTTCACACGCTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008094.10
CDS GCA 72 bp ATGCGTTGGTCCTCTTCCACTGGCACAAATTTGTCGTaGATGCCGTGCACTAGCAGCACGGGTACCGTCAGC +
Preference number: 6 (lower is better)
Translates to: MRWSSSTGTNLS*MPCTSSTGTVS
Trigger: GCTGACGGTACCCGTGCTGCTAGTGCACGGCATGCACGACAAATTTGTGCCAGTGGAAGAGGACCAACGCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008094.10
CDS CAA 72 bp TCAGCCATGCGTTGGTCCTCTTCCACTGGCACAAATTaGTCGTGCATGCCGTGCACTAGCAGCACGGGTACC +
Preference number: 6 (lower is better)
Translates to: SAMRWSSSTGTN*SCMPCTSSTGT
Trigger: GGTACCCGTGCTGCTAGTGCACGGCATGCACGACAAATTTGTGCCAGTGGAAGAGGACCAACGCATGGCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008094.10
CDS CAA 90 bp CAATACTGGCCACTCATCATGGCCCGCAGCACGAAGGAGGACACATaGAACGCATTGCCCTCCTTCAGCAGCTGCTTTTCTTTGGCCCCT +
Preference number: 6 (lower is better)
Translates to: QYWPLIMARSTKEDT*NALPSFSSCFSLAP
Trigger: AGGGGCCAAAGAAAAGCAGCTGCTGAAGGAGGGCAATGCGTTCAATGTGTCCTCCTTCGTGCTGCGGGCCATGATGAGTGGCCAGTATTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000008094.10
CDS CAA 72 bp AGTGCCGTGGGGCCCCCACCGTTGATCATGATCACTTaGTGTACAAGATCTGGGTACTCGTGGGCCAGGAAA +
Preference number: 6 (lower is better)
Translates to: SAVGPPPLIMIT*CTRSGYSWARK
Trigger: TTTCCTGGCCCACGAGTACCCAGATCTTGTACACAAAGTGATCATGATCAACGGTGGGGGCCCCACGGCACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000008094.10
CDS CCA 72 bp TTGAGAAAGGCCAGCAGCAGGATCTCAGCCATGCGTTaGTCCTCTTCCACTGGCACAAATTTGTCGTGCATG +
Preference number: 6 (lower is better)
Translates to: LRKASSRISAMR*SSSTGTNLSCM
Trigger: CATGCACGACAAATTTGTGCCAGTGGAAGAGGACCAACGCATGGCTGAGATCCTGCTGCTGGCCTTTCTCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008094.10
CDS CAA 72 bp CTTGAGAAAGGCCAGCAGCAGGATCTCAGCCATGCGTaGGTCCTCTTCCACTGGCACAAATTTGTCGTGCAT +
Preference number: 6 (lower is better)
Translates to: LEKGQQQDLSHA*VLFHWHKFVVH
Trigger: ATGCACGACAAATTTGTGCCAGTGGAAGAGGACCAACGCATGGCTGAGATCCTGCTGCTGGCCTTTCTCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008094.10
CDS CCA 72 bp CCCACCGTTGATCATGATCACTTTGTGTACAAGATCTaGGTACTCGTGGGCCAGGAAAGTACAGAAGGAGAC +
Preference number: 6 (lower is better)
Translates to: PTVDHDHFVYKI*VLVGQESTEGD
Trigger: GTCTCCTTCTGTACTTTCCTGGCCCACGAGTACCCAGATCTTGTACACAAAGTGATCATGATCAACGGTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008094.10