Pregenerated sensors for ABHD5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032540Ensembl transcript IDs: ENSMUST00000035128.11, ENSMUST00000111497.5, ENSMUST00000156520.8, ENSMUST00000175973.2
Found 130 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CAGTCCAGGAGACTGCGGGGGTCCTCGGGCTGTGGGGATTGCTCATaGACGGCACCCGTCACGGGTGCTGCATGGTTCTGTGTGCTCAGT | + |
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Preference number: 1 (lower is better) Translates to: QSRRLRGSSGCGDCS*TAPVTGAAWFCVLS Trigger: ACTGAGCACACAGAACCATGCAGCACCCGTGACGGGTGCCGTTCATGAGCAATCCCCACAGCCCGAGGACCCCCGCAGTCTCCTGGACTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035128.11 |
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| 3UTR CCA 90 bp | AAGCTGCAGAGTCCAGTCCAGGAGACTGCGGGGGTCCTCGGGCTGTaGGGATTGCTCATGAACGGCACCCGTCACGGGTGCTGCATGGTT | + |
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Preference number: 1 (lower is better) Translates to: KLQSPVQETAGVLGL*GLLMNGTRHGCCMV Trigger: AACCATGCAGCACCCGTGACGGGTGCCGTTCATGAGCAATCCCCACAGCCCGAGGACCCCCGCAGTCTCCTGGACTGGACTCTGCAGCTT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000035128.11 ENSMUST00000111497.5 ENSMUST00000156520.8 |
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| 3UTR GCA 90 bp | GTCCTCGGGCTGTGGGGATTGCTCATGAACGGCACCCGTCACGGGTaGTGCATGGTTCTGTGTGCTCAGTCTACTGTGTGGCAGATCTCC | + |
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Preference number: 1 (lower is better) Translates to: VLGLWGLLMNGTRHG*CMVLCAQSTVWQIS Trigger: GGAGATCTGCCACACAGTAGACTGAGCACACAGAACCATGCAGCACCCGTGACGGGTGCCGTTCATGAGCAATCCCCACAGCCCGAGGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035128.11 |
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| 3UTR GCA 90 bp | CTCGGGCTGTGGGGATTGCTCATGAACGGCACCCGTCACGGGTGCTaGATGGTTCTGTGTGCTCAGTCTACTGTGTGGCAGATCTCCTTG | + |
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Preference number: 1 (lower is better) Translates to: LGLWGLLMNGTRHGC*MVLCAQSTVWQISL Trigger: CAAGGAGATCTGCCACACAGTAGACTGAGCACACAGAACCATGCAGCACCCGTGACGGGTGCCGTTCATGAGCAATCCCCACAGCCCGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035128.11 |
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| 3UTR TCA 90 bp | CGCCCCGAGGATGGCAATTGTCTTCACGTAGGACTTCGGTCGCAGTaGCTGGATGCTGGTTCCAGAGTTGCCATCTATGCAGGATCGGGC | + |
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Preference number: 1 (lower is better) Translates to: RPEDGNCLHVGLRSQ*LDAGSRVAIYAGSG Trigger: GCCCGATCCTGCATAGATGGCAACTCTGGAACCAGCATCCAGTCACTGCGACCGAAGTCCTACGTGAAGACAATTGCCATCCTCGGGGCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035128.11 |
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| 3UTR GCA 90 bp | GGATGGCAATTGTCTTCACGTAGGACTTCGGTCGCAGTGACTGGATaGTGGTTCCAGAGTTGCCATCTATGCAGGATCGGGCTCCAAAGA | + |
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Preference number: 1 (lower is better) Translates to: GWQLSSRRTSVAVTG*WFQSCHLCRIGLQR Trigger: TCTTTGGAGCCCGATCCTGCATAGATGGCAACTCTGGAACCAGCATCCAGTCACTGCGACCGAAGTCCTACGTGAAGACAATTGCCATCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035128.11 |
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| 3UTR CCA 90 bp | ATTCTTCTGGCTGATCTGCATACACATAATGCCCCGCCCCGAGGATaGCAATTGTCTTCACGTAGGACTTCGGTCGCAGTGACTGGATGC | + |
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Preference number: 1 (lower is better) Translates to: ILLADLHTHNAPPRG*QLSSRRTSVAVTGC Trigger: GCATCCAGTCACTGCGACCGAAGTCCTACGTGAAGACAATTGCCATCCTCGGGGCGGGGCATTATGTGTATGCAGATCAGCCAGAAGAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035128.11 |
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| 3UTR GCA 90 bp | TCACGTAGGACTTCGGTCGCAGTGACTGGATGCTGGTTCCAGAGTTaGCATCTATGCAGGATCGGGCTCCAAAGATCACTGAAACTGGAA | + |
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Preference number: 1 (lower is better) Translates to: SRRTSVAVTGCWFQS*HLCRIGLQRSLKLE Trigger: TTCCAGTTTCAGTGATCTTTGGAGCCCGATCCTGCATAGATGGCAACTCTGGAACCAGCATCCAGTCACTGCGACCGAAGTCCTACGTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035128.11 |
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| 3UTR CCA 90 bp | TGGCAATTGTCTTCACGTAGGACTTCGGTCGCAGTGACTGGATGCTaGTTCCAGAGTTGCCATCTATGCAGGATCGGGCTCCAAAGATCA | + |
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Preference number: 1 (lower is better) Translates to: WQLSSRRTSVAVTGC*FQSCHLCRIGLQRS Trigger: TGATCTTTGGAGCCCGATCCTGCATAGATGGCAACTCTGGAACCAGCATCCAGTCACTGCGACCGAAGTCCTACGTGAAGACAATTGCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035128.11 |
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| 3UTR TCA 90 bp | GGTTCCAGAGTTGCCATCTATGCAGGATCGGGCTCCAAAGATCACTaGAACTGGAATGTCAGGATGCAAGCCACCTATCCGCTGAAGCAT | + |
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Preference number: 1 (lower is better) Translates to: GSRVAIYAGSGSKDH*NWNVRMQATYPLKH Trigger: ATGCTTCAGCGGATAGGTGGCTTGCATCCTGACATTCCAGTTTCAGTGATCTTTGGAGCCCGATCCTGCATAGATGGCAACTCTGGAACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035128.11 |
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| 3UTR GCA 90 bp | ACTTCGGTCGCAGTGACTGGATGCTGGTTCCAGAGTTGCCATCTATaGAGGATCGGGCTCCAAAGATCACTGAAACTGGAATGTCAGGAT | + |
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Preference number: 1 (lower is better) Translates to: TSVAVTGCWFQSCHL*RIGLQRSLKLECQD Trigger: ATCCTGACATTCCAGTTTCAGTGATCTTTGGAGCCCGATCCTGCATAGATGGCAACTCTGGAACCAGCATCCAGTCACTGCGACCGAAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035128.11 |
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| 3UTR GCA 90 bp | GTGGCAGATCTCCTTGACTTTCTGGTTGAATTCTTCTGGCTGATCTaGATACACATAATGCCCCGCCCCGAGGATGGCAATTGTCTTCAC | + |
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Preference number: 1 (lower is better) Translates to: VADLLDFLVEFFWLI*IHIMPRPEDGNCLH Trigger: GTGAAGACAATTGCCATCCTCGGGGCGGGGCATTATGTGTATGCAGATCAGCCAGAAGAATTCAACCAGAAAGTCAAGGAGATCTGCCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035128.11 |
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| 3UTR CCA 90 bp | GTCTACTGTGTGGCAGATCTCCTTGACTTTCTGGTTGAATTCTTCTaGCTGATCTGCATACACATAATGCCCCGCCCCGAGGATGGCAAT | + |
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Preference number: 1 (lower is better) Translates to: VYCVADLLDFLVEFF*LICIHIMPRPEDGN Trigger: ATTGCCATCCTCGGGGCGGGGCATTATGTGTATGCAGATCAGCCAGAAGAATTCAACCAGAAAGTCAAGGAGATCTGCCACACAGTAGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035128.11 |
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| 3UTR GCA 90 bp | TTCTTCCGAAGCCCAATAGGTCAAAGGCATAGACAGGCCTATCGGTaGTTAGATCTTCAAAATTCAGGGCCCAAAGTCCAAGACCTCCTC | + |
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Preference number: 1 (lower is better) Translates to: FFRSPIGQRHRQAYR*LDLQNSGPKVQDLL Trigger: GAGGAGGTCTTGGACTTTGGGCCCTGAATTTTGAAGATCTAAGCACCGATAGGCCTGTCTATGCCTTTGACCTATTGGGCTTCGGAAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035128.11 ENSMUST00000175973.2 |
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| 3UTR CCA 90 bp | GGCCCAAAGTCCAAGACCTCCTCCAAAACCATGAAGGAGGACAAGTaGCGTCTTACTAGAAATGTTGTGAGAGAACATCAGCGTCCATAT | + |
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Preference number: 1 (lower is better) Translates to: GPKSKTSSKTMKEDK*RLTRNVVREHQRPY Trigger: ATATGGACGCTGATGTTCTCTCACAACATTTCTAGTAAGACGCCACTTGTCCTCCTTCATGGTTTTGGAGGAGGTCTTGGACTTTGGGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035128.11 |
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| 3UTR TCA 90 bp | TCCAACCTGAGGGCACATCTCCACTCTTCAATGGATTCCACAAACTaGTTCTCCACTTCTTCCGCATCACTGTCAAACCTAGGTCTACTA | + |
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Preference number: 1 (lower is better) Translates to: SNLRAHLHSSMDSTN*FSTSSASLSNLGLL Trigger: TAGTAGACCTAGGTTTGACAGTGATGCGGAAGAAGTGGAGAATCAGTTTGTGGAATCCATTGAAGAGTGGAGATGTGCCCTCAGGTTGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035128.11 ENSMUST00000175973.2 |
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| 3UTR TCA 90 bp | AGAACCCTCCCAGGTTGTGTCCAAGCAAGATCATTTTGTCCAACCTaGGGGCACATCTCCACTCTTCAATGGATTCCACAAACTGATTCT | + |
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Preference number: 1 (lower is better) Translates to: RTLPGCVQARSFCPT*GHISTLQWIPQTDS Trigger: AGAATCAGTTTGTGGAATCCATTGAAGAGTGGAGATGTGCCCTCAGGTTGGACAAAATGATCTTGCTTGGACACAACCTGGGAGGGTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035128.11 ENSMUST00000175973.2 |
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| 3UTR TCA 90 bp | AAAGGGGACAGGTTTCAGGTTCGGGCTACTCAGCACTTGAATGGCTaGGTCTATGCATATGTTCTCATAGAACCCTGTAGATTACACACA | + |
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Preference number: 1 (lower is better) Translates to: KGDRFQVRATQHLNG*VYAYVLIEPCRLHT Trigger: TGTGTGTAATCTACAGGGTTCTATGAGAACATATGCATAGACTCAGCCATTCAAGTGCTGAGTAGCCCGAACCTGAAACCTGTCCCCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111497.5 ENSMUST00000156520.8 |
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| 3UTR CAA 90 bp | CAGAGTCCAGTCCAGGAGACTGCGGGGGTCCTCGGGCTGTGGGGATaGCTCATGAACGGCACCCGTCACGGGTGCTGCATGGTTCTGTGT | + |
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Preference number: 2 (lower is better) Translates to: QSPVQETAGVLGLWG*LMNGTRHGCCMVLC Trigger: ACACAGAACCATGCAGCACCCGTGACGGGTGCCGTTCATGAGCAATCCCCACAGCCCGAGGACCCCCGCAGTCTCCTGGACTGGACTCTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000035128.11 ENSMUST00000111497.5 ENSMUST00000156520.8 |
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| 3UTR-3UTR GCA 90 bp | CCAGTCCAGGAGACTGCGGGGGTCCTCGGGCTGTGGGGATTGCTCATGAACGGCCTGCATGGTTCTGTGTaGTCAGTCTACTGTGTGGCA | + |
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Preference number: 2 (lower is better) Translates to: PVQETAGVLGLWGLLMNGLHGSV*SVYCVA Trigger: TGCCACACAGTAGACTGAGCACACAGAACCATGCAG...GCCGTTCATGAGCAATCCCCACAGCCCGAGGACCCCCGCAGTCTCCTGGACTGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035128.11 |
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| 3UTR-3UTR GCA 90 bp | CCAGGAGACTGCGGGGGTCCTCGGGCTGTGGGGATTGCTCATGAACGGCACCCGTGTTTCCATTGGATATaGGCACAGGCTCTTTCTTGT | + |
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Preference number: 2 (lower is better) Translates to: PGDCGGPRAVGIAHERHPCFHWI*AQALSC Trigger: ACAAGAAAGAGCCTGTGCGCATATCCAATGGAAACA...CGGGTGCCGTTCATGAGCAATCCCCACAGCCCGAGGACCCCCGCAGTCTCCTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035128.11 |
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| 3UTR-3UTR CCA 90 bp | TTAAATGTGGAAAGCTGCAGAGTCCAGTCCAGGAGACTGCGGGGGTCCTCGGGCAGGGGACCTAGATCCTaGGTCCTGGGAATACTGGAA | + |
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Preference number: 2 (lower is better) Translates to: LNVESCRVQSRRLRGSSGRGPRS*VLGILE Trigger: TTCCAGTATTCCCAGGACCCAGGATCTAGGTCCCCT...GCCCGAGGACCCCCGCAGTCTCCTGGACTGGACTCTGCAGCTTTCCACATTTAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000111497.5 ENSMUST00000156520.8 |
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| 3UTR-3UTR TCA 90 bp | TGCACTAGACTTAACCCAAAAGGTCCTGCAATCCTGAGGCCAGCCAAGGGGTTACTGCCCCTAGGGCCCTaGTCCAAACTGGAATTGGTC | + |
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Preference number: 2 (lower is better) Translates to: CTRLNPKGPAILRPAKGLLPLGP*SKLELV Trigger: GACCAATTCCAGTTTGGATCAGGGCCCTAGGGGCAG...TAACCCCTTGGCTGGCCTCAGGATTGCAGGACCTTTTGGGTTAAGTCTAGTGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000035128.11 ENSMUST00000175973.2 |
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| 3UTR-3UTR CCA 90 bp | AGGACTTCGGTCGCAGTGACTGGATGCTGGTTCCAGAGTTGCCATCTATGCAGGGAAGCATTGGCCGTTTaGCCCACCCATAAGGAATCG | + |
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Preference number: 2 (lower is better) Translates to: RTSVAVTGCWFQSCHLCREALAV*PTHKES Trigger: CGATTCCTTATGGGTGGGCCAAACGGCCAATGCTTC...CCTGCATAGATGGCAACTCTGGAACCAGCATCCAGTCACTGCGACCGAAGTCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035128.11 |
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| 3UTR-3UTR TCA 90 bp | TTAAATGTGGAAAGCTGCAGAGTCCAGTCCAGGAGACTGCGGGGGTCCTCGGGCCAGCACTTGAATGGCTaGGTCTATGCATATGTTCTC | + |
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Preference number: 2 (lower is better) Translates to: LNVESCRVQSRRLRGSSGQHLNG*VYAYVL Trigger: GAGAACATATGCATAGACTCAGCCATTCAAGTGCTG...GCCCGAGGACCCCCGCAGTCTCCTGGACTGGACTCTGCAGCTTTCCACATTTAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000111497.5 ENSMUST00000156520.8 |
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| 3UTR CAA 90 bp | GCGGCAGCCAAGAACCCTCCCAGGTTGTGTCCAAGCAAGATCATTTaGTCCAACCTGAGGGCACATCTCCACTCTTCAATGGATTCCACA | + |
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Preference number: 2 (lower is better) Translates to: AAAKNPPRLCPSKII*SNLRAHLHSSMDST Trigger: TGTGGAATCCATTGAAGAGTGGAGATGTGCCCTCAGGTTGGACAAAATGATCTTGCTTGGACACAACCTGGGAGGGTTCTTGGCTGCCGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035128.11 ENSMUST00000175973.2 |
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| 3UTR-3UTR TCA 90 bp | GCCAAGGGGTTAAAGGGAGTCAATGCTGCCCCTAGGGCCCTGATCCAAACTGGAATGGATTCCACAAACTaGTTCTCCACTTCTTCCGCA | + |
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Preference number: 2 (lower is better) Translates to: AKGLKGVNAAPRALIQTGMDSTN*FSTSSA Trigger: TGCGGAAGAAGTGGAGAATCAGTTTGTGGAATCCAT...TCCAGTTTGGATCAGGGCCCTAGGGGCAGCATTGACTCCCTTTAACCCCTTGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035128.11 ENSMUST00000175973.2 |
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| 3UTR-3UTR TCA 90 bp | AGGACTTCGGTCGCAGTGACTGGATGCTGGTTCCAGAGTTGCCATCTATGCAGGATGGATTCCACAAACTaGTTCTCCACTTCTTCCGCA | + |
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Preference number: 2 (lower is better) Translates to: RTSVAVTGCWFQSCHLCRMDSTN*FSTSSA Trigger: TGCGGAAGAAGTGGAGAATCAGTTTGTGGAATCCAT...CCTGCATAGATGGCAACTCTGGAACCAGCATCCAGTCACTGCGACCGAAGTCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035128.11 |
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| 3UTR-3UTR TCA 90 bp | CGCTGCACTAGACTTAACCCAAAAGGTCCTGCAATCCTGAGGCCAGCCAAGGGGTCTACTAAAATGAGGTaGCTAACCCTTGATGGGTAC | + |
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Preference number: 2 (lower is better) Translates to: RCTRLNPKGPAILRPAKGSTKMR*LTLDGY Trigger: GTACCCATCAAGGGTTAGTCACCTCATTTTAGTAGA...CCCCTTGGCTGGCCTCAGGATTGCAGGACCTTTTGGGTTAAGTCTAGTGCAGCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000035128.11 ENSMUST00000175973.2 |
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| 3UTR-3UTR TCA 90 bp | TTGTGTCCAAGCAAGATCATTTTGTCCAACCTGAGGGCACATCTCCACTCTTCACCTCCTCCAAAACCATaGAGGAGGACAAGTGGCGTC | + |
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Preference number: 2 (lower is better) Translates to: LCPSKIILSNLRAHLHSSPPPKP*RRTSGV Trigger: GACGCCACTTGTCCTCCTTCATGGTTTTGGAGGAGG...TGAAGAGTGGAGATGTGCCCTCAGGTTGGACAAAATGATCTTGCTTGGACACAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035128.11 ENSMUST00000175973.2 |
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| 3UTR-3UTR CCA 90 bp | TGCACTAGACTTAACCCAAAAGGTCCTGCAATCCTGAGGCCAGCCAAGGGGTTATTGATCAGCAAGATCTaGTCGCTCAGGAAAACCCCA | + |
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Preference number: 2 (lower is better) Translates to: CTRLNPKGPAILRPAKGLLISKI*SLRKTP Trigger: TGGGGTTTTCCTGAGCGACCAGATCTTGCTGATCAA...TAACCCCTTGGCTGGCCTCAGGATTGCAGGACCTTTTGGGTTAAGTCTAGTGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000035128.11 ENSMUST00000175973.2 |
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| 3UTR-3UTR CCA 90 bp | GGCTATTTTTATTCTCAAGGTGGTGAGAACAAGCACTTTTGGTCTCACGGTGGCAGGGGACCTAGATCCTaGGTCCTGGGAATACTGGAA | + |
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Preference number: 2 (lower is better) Translates to: GYFYSQGGENKHFWSHGGRGPRS*VLGILE Trigger: TTCCAGTATTCCCAGGACCCAGGATCTAGGTCCCCT...GCCACCGTGAGACCAAAAGTGCTTGTTCTCACCACCTTGAGAATAAAAATAGCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000111497.5 ENSMUST00000156520.8 |
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| 3UTR-3UTR TCA 90 bp | CTTCACAGGTTTCCAGTAAAGCAAAGCAGCTCAGTGGGGAAGTCAGTTTCTTTGCAAGTCATCGAGTCGTaGTTTGTGAGGTCGAGGTTT | + |
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Preference number: 2 (lower is better) Translates to: LHRFPVKQSSSVGKSVSLQVIES*FVRSRF Trigger: AAACCTCGACCTCACAAATCACGACTCGATGACTTG...CAAAGAAACTGACTTCCCCACTGAGCTGCTTTGCTTTACTGGAAACCTGTGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111497.5 ENSMUST00000156520.8 |
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| 3UTR-3UTR CCA 90 bp | AAGCATTGGCCGTTTGGCCCACCCATAAGGAATCGTCATGTTTTTGAAAGCTGTGGCCCTGATCCAAACTaGAATTGGTCTCTCTTGATC | + |
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Preference number: 2 (lower is better) Translates to: KHWPFGPPIRNRHVFESCGPDPN*NWSLLI Trigger: GATCAAGAGAGACCAATTCCAGTTTGGATCAGGGCC...ACAGCTTTCAAAAACATGACGATTCCTTATGGGTGGGCCAAACGGCCAATGCTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035128.11 |
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| 3UTR-3UTR CCA 90 bp | AGTGTGGATCTGGCCACCCACAACACTAACTATAAAGGGGGAAAAAGGCTATTTGAACACAGTGGGACTTaGTTTCCCGATAGGCAACAG | + |
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Preference number: 2 (lower is better) Translates to: SVDLATHNTNYKGGKRLFEHSGT*FPDRQQ Trigger: CTGTTGCCTATCGGGAAACCAAGTCCCACTGTGTTC...AAATAGCCTTTTTCCCCCTTTATAGTTAGTGTTGTGGGTGGCCAGATCCACACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000111497.5 ENSMUST00000156520.8 |
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| 3UTR CAA 90 bp | TACTCTGTCACCGTGTCATCTTCAAACATAGAGGAGTACTTCCGCTaGAAATCAGGCCTCAAACGCTGCACTAGACTTAACCCAAAAGGT | + |
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Preference number: 2 (lower is better) Translates to: YSVTVSSSNIEEYFR*KSGLKRCTRLNPKG Trigger: ACCTTTTGGGTTAAGTCTAGTGCAGCGTTTGAGGCCTGATTTCAAGCGGAAGTACTCCTCTATGTTTGAAGATGACACGGTGACAGAGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035128.11 |
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| 3UTR-3UTR GCA 90 bp | GTCCAACCTGAGGGCACATCTCCACTCTTCAATGGATTCCACAAACTGATTCTCGCTCTTTCTTGTAAGTaGAGGGGACACATTTTAACA | + |
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Preference number: 2 (lower is better) Translates to: VQPEGTSPLFNGFHKLILALSCK*RGHILT Trigger: TGTTAAAATGTGTCCCCTGCACTTACAAGAAAGAGC...GAGAATCAGTTTGTGGAATCCATTGAAGAGTGGAGATGTGCCCTCAGGTTGGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035128.11 |
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| 3UTR-3UTR GCA 90 bp | AGAAGGCTTTCTCAGCATCCAGCTATTCCATGGAGCTTTTTCATAGTTTCAAATAAGGGCCCCAGGAACTaGGTTGCTGTAAGCACTATG | + |
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Preference number: 2 (lower is better) Translates to: RRLSQHPAIPWSFFIVSNKGPRN*VAVSTM Trigger: CATAGTGCTTACAGCAACGCAGTTCCTGGGGCCCTT...ATTTGAAACTATGAAAAAGCTCCATGGAATAGCTGGATGCTGAGAAAGCCTTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000111497.5 ENSMUST00000156520.8 |
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| 3UTR-3UTR CCA 90 bp | AGAAGGCTTTCTCAGCATCCAGCTATTCCATGGAGCTTTTTCATAGTTTCAAATGGGTCCTGGGAATACTaGAAGGAAAGGGGACAGGTT | + |
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Preference number: 2 (lower is better) Translates to: RRLSQHPAIPWSFFIVSNGSWEY*KERGQV Trigger: AACCTGTCCCCTTTCCTTCCAGTATTCCCAGGACCC...ATTTGAAACTATGAAAAAGCTCCATGGAATAGCTGGATGCTGAGAAAGCCTTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000111497.5 ENSMUST00000156520.8 |
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| 3UTR-3UTR CCA 90 bp | ATCACTGCACACACCATGGAAATTTTAATGTTTAGGAAGCTTCACAGGTTTCCAGAACACAGTGGGACTTaGTTTCCCGATAGGCAACAG | + |
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Preference number: 2 (lower is better) Translates to: ITAHTMEILMFRKLHRFPEHSGT*FPDRQQ Trigger: CTGTTGCCTATCGGGAAACCAAGTCCCACTGTGTTC...TGGAAACCTGTGAAGCTTCCTAAACATTAAAATTTCCATGGTGTGTGCAGTGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111497.5 ENSMUST00000156520.8 |
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| 3UTR-3UTR TCA 90 bp | CTTCACAGGTTTCCAGTAAAGCAAAGCAGCTCAGTGGGGAAGTCAGTTTCTTTGACACATTTAAAATGCTaGAACACGGCCTTGATCATA | + |
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Preference number: 2 (lower is better) Translates to: LHRFPVKQSSSVGKSVSLTHLKC*NTALII Trigger: TATGATCAAGGCCGTGTTTCAGCATTTTAAATGTGT...CAAAGAAACTGACTTCCCCACTGAGCTGCTTTGCTTTACTGGAAACCTGTGAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111497.5 ENSMUST00000156520.8 |
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| 3UTR-3UTR GCA 90 bp | AGTGTGGATCTGGCCACCCACAACACTAACTATAAAGGGGGAAAAAGGCTATTTTCCAATGGTGGTTTCTaGCAAACAGTTCAAACAACA | + |
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Preference number: 2 (lower is better) Translates to: SVDLATHNTNYKGGKRLFSNGGF*QTVQTT Trigger: TGTTGTTTGAACTGTTTGGCAGAAACCACCATTGGA...AAATAGCCTTTTTCCCCCTTTATAGTTAGTGTTGTGGGTGGCCAGATCCACACT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000111497.5 ENSMUST00000156520.8 |
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| 3UTR-3UTR CCA 90 bp | ACCATGAAGGAGGACAAGTGGCGTCTTACTAGAAATGTTGTGAGAGAACATCAGATATTCTGTTTCCATTaGATATGCGCACAGGCTCTT | + |
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Preference number: 2 (lower is better) Translates to: TMKEDKWRLTRNVVREHQIFCFH*ICAQAL Trigger: AAGAGCCTGTGCGCATATCCAATGGAAACAGAATAT...CTGATGTTCTCTCACAACATTTCTAGTAAGACGCCACTTGTCCTCCTTCATGGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035128.11 |
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| 3UTR-3UTR CCA 90 bp | CTTCACAGGTTTCCAGTAAAGCAAAGCAGCTCAGTGGGGAAGTCAGTTTCTTTGAATCTGCTTTTCTCCTaGACAAACAATGTTGGTAAC | + |
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Preference number: 2 (lower is better) Translates to: LHRFPVKQSSSVGKSVSLNLLFS*TNNVGN Trigger: GTTACCAACATTGTTTGTCCAGGAGAAAAGCAGATT...CAAAGAAACTGACTTCCCCACTGAGCTGCTTTGCTTTACTGGAAACCTGTGAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111497.5 ENSMUST00000156520.8 |
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| 3UTR-3UTR CCA 90 bp | GGCTATTTTTATTCTCAAGGTGGTGAGAACAAGCACTTTTGGTCTCACGGTGGCAATCTGCTTTTCTCCTaGACAAACAATGTTGGTAAC | + |
|
Preference number: 2 (lower is better) Translates to: GYFYSQGGENKHFWSHGGNLLFS*TNNVGN Trigger: GTTACCAACATTGTTTGTCCAGGAGAAAAGCAGATT...GCCACCGTGAGACCAAAAGTGCTTGTTCTCACCACCTTGAGAATAAAAATAGCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000111497.5 ENSMUST00000156520.8 |
||
| 3UTR-3UTR TCA 90 bp | CAGAAGGACAACCTTTATTTAAGGCGATTATTAAATTGGGAGACTCTCCTATATGGGCTACTCAGCACTTaGATGGCTGAGTCTATGCAT | + |
|
Preference number: 2 (lower is better) Translates to: QKDNLYLRRLLNWETLLYGLLST*MAESMH Trigger: ATGCATAGACTCAGCCATTCAAGTGCTGAGTAGCCC...ATATAGGAGAGTCTCCCAATTTAATAATCGCCTTAAATAAAGGTTGTCCTTCTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111497.5 ENSMUST00000156520.8 |
||
| 3UTR CAA 90 bp | CGAGGTTTTATTTGTGTAATCTGCTTTTCTCCTGGACAAACAATGTaGGTAACAATGCTCTTTGTTCTCTGTTCTCTAGACAGAAGGCTT | + |
|
Preference number: 2 (lower is better) Translates to: RGFICVICFSPGQTM*VTMLFVLCSLDRRL Trigger: AAGCCTTCTGTCTAGAGAACAGAGAACAAAGAGCATTGTTACCAACATTGTTTGTCCAGGAGAAAAGCAGATTACACAAATAAAACCTCG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111497.5 ENSMUST00000156520.8 |
||
| 3UTR-3UTR TCA 90 bp | ATCACTGCACACACCATGGAAATTTTAATGTTTAGGAAGCTTCACAGGTTTCCAACACATTTAAAATGCTaGAACACGGCCTTGATCATA | + |
|
Preference number: 2 (lower is better) Translates to: ITAHTMEILMFRKLHRFPTHLKC*NTALII Trigger: TATGATCAAGGCCGTGTTTCAGCATTTTAAATGTGT...TGGAAACCTGTGAAGCTTCCTAAACATTAAAATTTCCATGGTGTGTGCAGTGAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111497.5 ENSMUST00000156520.8 |
||
| 3UTR CAA 90 bp | TTCTCAGCATCCAGCTATTCCATGGAGCTTTTTCATAGTTTCAAATaGTCTCTCACTTTAACACTGTCAGAAAGTTATAAATCCAATGGT | + |
|
Preference number: 2 (lower is better) Translates to: FSASSYSMELFHSFK*SLTLTLSESYKSNG Trigger: ACCATTGGATTTATAACTTTCTGACAGTGTTAAAGTGAGAGACAATTTGAAACTATGAAAAAGCTCCATGGAATAGCTGGATGCTGAGAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000111497.5 ENSMUST00000156520.8 |
||
| 3UTR CCA 72 bp | AGTCCAGTCCAGGAGACTGCGGGGGTCCTCGGGCTGTaGGGATTGCTCATGAACGGCACCCGTCACGGGTGC | + |
|
Preference number: 3 (lower is better) Translates to: SPVQETAGVLGL*GLLMNGTRHGC Trigger: GCACCCGTGACGGGTGCCGTTCATGAGCAATCCCCACAGCCCGAGGACCCCCGCAGTCTCCTGGACTGGACT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000035128.11 ENSMUST00000111497.5 ENSMUST00000156520.8 |
||
| 3UTR GCA 72 bp | CTGTGGGGATTGCTCATGAACGGCACCCGTCACGGGTaGTGCATGGTTCTGTGTGCTCAGTCTACTGTGTGG | + |
|
Preference number: 3 (lower is better) Translates to: LWGLLMNGTRHG*CMVLCAQSTVW Trigger: CCACACAGTAGACTGAGCACACAGAACCATGCAGCACCCGTGACGGGTGCCGTTCATGAGCAATCCCCACAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035128.11 |
||
| 3UTR CCA 72 bp | TCTTCACGTAGGACTTCGGTCGCAGTGACTGGATGCTaGTTCCAGAGTTGCCATCTATGCAGGATCGGGCTC | + |
|
Preference number: 3 (lower is better) Translates to: SSRRTSVAVTGC*FQSCHLCRIGL Trigger: GAGCCCGATCCTGCATAGATGGCAACTCTGGAACCAGCATCCAGTCACTGCGACCGAAGTCCTACGTGAAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035128.11 |
||
| 3UTR CCA 72 bp | GCTGATCTGCATACACATAATGCCCCGCCCCGAGGATaGCAATTGTCTTCACGTAGGACTTCGGTCGCAGTG | + |
|
Preference number: 3 (lower is better) Translates to: ADLHTHNAPPRG*QLSSRRTSVAV Trigger: CACTGCGACCGAAGTCCTACGTGAAGACAATTGCCATCCTCGGGGCGGGGCATTATGTGTATGCAGATCAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035128.11 |
||
| 3UTR GCA 72 bp | ACTTCGGTCGCAGTGACTGGATGCTGGTTCCAGAGTTaGCATCTATGCAGGATCGGGCTCCAAAGATCACTG | + |
|
Preference number: 3 (lower is better) Translates to: TSVAVTGCWFQS*HLCRIGLQRSL Trigger: CAGTGATCTTTGGAGCCCGATCCTGCATAGATGGCAACTCTGGAACCAGCATCCAGTCACTGCGACCGAAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035128.11 |
||
| 3UTR GCA 72 bp | TTGTCTTCACGTAGGACTTCGGTCGCAGTGACTGGATaGTGGTTCCAGAGTTGCCATCTATGCAGGATCGGG | + |
|
Preference number: 3 (lower is better) Translates to: LSSRRTSVAVTG*WFQSCHLCRIG Trigger: CCCGATCCTGCATAGATGGCAACTCTGGAACCAGCATCCAGTCACTGCGACCGAAGTCCTACGTGAAGACAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035128.11 |
||
| 3UTR CCA 72 bp | GTGTTAACATCCCTGCAAGTGAGGGGACCTAGATCCTaGGTCCTGGGAATACTGGAAGGAAAGGGGACAGGT | + |
|
Preference number: 3 (lower is better) Translates to: VLTSLQVRGPRS*VLGILEGKGTG Trigger: ACCTGTCCCCTTTCCTTCCAGTATTCCCAGGACCCAGGATCTAGGTCCCCTCACTTGCAGGGATGTTAACAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111497.5 ENSMUST00000156520.8 |
||
| 3UTR-3UTR CAA 90 bp | CGCTGCACTAGACTTAACCCAAAAGGTCCTGCAATCCTGAGGCCAGCCAAGGGGCCAAGCAAGATCATTTaGTCCAACCTGAGGGCACAT | + |
|
Preference number: 3 (lower is better) Translates to: RCTRLNPKGPAILRPAKGPSKII*SNLRAH Trigger: ATGTGCCCTCAGGTTGGACAAAATGATCTTGCTTGG...CCCCTTGGCTGGCCTCAGGATTGCAGGACCTTTTGGGTTAAGTCTAGTGCAGCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035128.11 ENSMUST00000175973.2 |
||
| 3UTR TCA 72 bp | GTTGCCATCTATGCAGGATCGGGCTCCAAAGATCACTaGAACTGGAATGTCAGGATGCAAGCCACCTATCCG | + |
|
Preference number: 3 (lower is better) Translates to: VAIYAGSGSKDH*NWNVRMQATYP Trigger: CGGATAGGTGGCTTGCATCCTGACATTCCAGTTTCAGTGATCTTTGGAGCCCGATCCTGCATAGATGGCAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035128.11 |
||
| 3UTR TCA 72 bp | GATGGCAATTGTCTTCACGTAGGACTTCGGTCGCAGTaGCTGGATGCTGGTTCCAGAGTTGCCATCTATGCA | + |
|
Preference number: 3 (lower is better) Translates to: DGNCLHVGLRSQ*LDAGSRVAIYA Trigger: TGCATAGATGGCAACTCTGGAACCAGCATCCAGTCACTGCGACCGAAGTCCTACGTGAAGACAATTGCCATC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035128.11 |
||
| 3UTR GCA 72 bp | GCAGTGACTGGATGCTGGTTCCAGAGTTGCCATCTATaGAGGATCGGGCTCCAAAGATCACTGAAACTGGAA | + |
|
Preference number: 3 (lower is better) Translates to: AVTGCWFQSCHL*RIGLQRSLKLE Trigger: TTCCAGTTTCAGTGATCTTTGGAGCCCGATCCTGCATAGATGGCAACTCTGGAACCAGCATCCAGTCACTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035128.11 |
||
| 3UTR CCA 72 bp | AATGTCAGGATGCAAGCCACCTATCCGCTGAAGCATTaGCCGTTTGGCCCACCCATAAGGAATCGTCATGTT | + |
|
Preference number: 3 (lower is better) Translates to: NVRMQATYPLKH*PFGPPIRNRHV Trigger: AACATGACGATTCCTTATGGGTGGGCCAAACGGCCAATGCTTCAGCGGATAGGTGGCTTGCATCCTGACATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035128.11 |
||
| 3UTR CCA 72 bp | GTGGCAGATCTCCTTGACTTTCTGGTTGAATTCTTCTaGCTGATCTGCATACACATAATGCCCCGCCCCGAG | + |
|
Preference number: 3 (lower is better) Translates to: VADLLDFLVEFF*LICIHIMPRPE Trigger: CTCGGGGCGGGGCATTATGTGTATGCAGATCAGCCAGAAGAATTCAACCAGAAAGTCAAGGAGATCTGCCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035128.11 |
||
| 3UTR GCA 72 bp | GAGGAGTACTTCCGCTTGAAATCAGGCCTCAAACGCTaGACTAGACTTAACCCAAAAGGTCCTGCAATCCTG | + |
|
Preference number: 3 (lower is better) Translates to: EEYFRLKSGLKR*TRLNPKGPAIL Trigger: CAGGATTGCAGGACCTTTTGGGTTAAGTCTAGTGCAGCGTTTGAGGCCTGATTTCAAGCGGAAGTACTCCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035128.11 ENSMUST00000175973.2 |
||
| 3UTR GCA 72 bp | CTCCTTGACTTTCTGGTTGAATTCTTCTGGCTGATCTaGATACACATAATGCCCCGCCCCGAGGATGGCAAT | + |
|
Preference number: 3 (lower is better) Translates to: LLDFLVEFFWLI*IHIMPRPEDGN Trigger: ATTGCCATCCTCGGGGCGGGGCATTATGTGTATGCAGATCAGCCAGAAGAATTCAACCAGAAAGTCAAGGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035128.11 |
||
| 3UTR GCA 72 bp | AACCCTGTAGATTACACACAGAAGGGCCCCAGGAACTaGGTTGCTGTAAGCACTATGTCACCATGGAACACA | + |
|
Preference number: 3 (lower is better) Translates to: NPVDYTQKGPRN*VAVSTMSPWNT Trigger: TGTGTTCCATGGTGACATAGTGCTTACAGCAACGCAGTTCCTGGGGCCCTTCTGTGTGTAATCTACAGGGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111497.5 ENSMUST00000156520.8 |
||
| 3UTR TCA 72 bp | TTCAGGGCCCAAAGTCCAAGACCTCCTCCAAAACCATaGAGGAGGACAAGTGGCGTCTTACTAGAAATGTTG | + |
|
Preference number: 3 (lower is better) Translates to: FRAQSPRPPPKP*RRTSGVLLEML Trigger: CAACATTTCTAGTAAGACGCCACTTGTCCTCCTTCATGGTTTTGGAGGAGGTCTTGGACTTTGGGCCCTGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035128.11 |
||
| 3UTR GCA 72 bp | GCGTTAAATGAGTCAGATAAAGGGTCGCTGGGAGGCTaGTTTGTCCCGCTTCAATATGATTTTCACGGTCTC | + |
|
Preference number: 3 (lower is better) Translates to: ALNESDKGSLGG*FVPLQYDFHGL Trigger: GAGACCGTGAAAATCATATTGAAGCGGGACAAAGCAGCCTCCCAGCGACCCTTTATCTGACTCATTTAACGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111497.5 ENSMUST00000156520.8 |
||
| 3UTR CCA 72 bp | GGGTGCTGCATGGTTCTGTGTGCTCAGTCTACTGTGTaGCAGATCTCCTTGACTTTCTGGTTGAATTCTTCT | + |
|
Preference number: 3 (lower is better) Translates to: GCCMVLCAQSTV*QISLTFWLNSS Trigger: AGAAGAATTCAACCAGAAAGTCAAGGAGATCTGCCACACAGTAGACTGAGCACACAGAACCATGCAGCACCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035128.11 |
||
| 3UTR TCA 72 bp | CCAGGTTGTGTCCAAGCAAGATCATTTTGTCCAACCTaGGGGCACATCTCCACTCTTCAATGGATTCCACAA | + |
|
Preference number: 3 (lower is better) Translates to: PGCVQARSFCPT*GHISTLQWIPQ Trigger: TTGTGGAATCCATTGAAGAGTGGAGATGTGCCCTCAGGTTGGACAAAATGATCTTGCTTGGACACAACCTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035128.11 ENSMUST00000175973.2 |
||
| 3UTR GCA 72 bp | AGAACATCAGCGTCCATATTCTGTTTCCATTGGATATaGGCACAGGCTCTTTCTTGTAAGTGCAGGGGACAC | + |
|
Preference number: 3 (lower is better) Translates to: RTSASIFCFHWI*AQALSCKCRGH Trigger: GTGTCCCCTGCACTTACAAGAAAGAGCCTGTGCGCATATCCAATGGAAACAGAATATGGACGCTGATGTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035128.11 |
||
| 3UTR GCA 72 bp | AGCCCAATAGGTCAAAGGCATAGACAGGCCTATCGGTaGTTAGATCTTCAAAATTCAGGGCCCAAAGTCCAA | + |
|
Preference number: 3 (lower is better) Translates to: SPIGQRHRQAYR*LDLQNSGPKVQ Trigger: TTGGACTTTGGGCCCTGAATTTTGAAGATCTAAGCACCGATAGGCCTGTCTATGCCTTTGACCTATTGGGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035128.11 ENSMUST00000175973.2 |
||
| 3UTR TCA 72 bp | AGGGCACATCTCCACTCTTCAATGGATTCCACAAACTaGTTCTCCACTTCTTCCGCATCACTGTCAAACCTA | + |
|
Preference number: 3 (lower is better) Translates to: RAHLHSSMDSTN*FSTSSASLSNL Trigger: TAGGTTTGACAGTGATGCGGAAGAAGTGGAGAATCAGTTTGTGGAATCCATTGAAGAGTGGAGATGTGCCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035128.11 ENSMUST00000175973.2 |
||
| 3UTR CCA 72 bp | TGTGAGAGAACATCAGCGTCCATATTCTGTTTCCATTaGATATGCGCACAGGCTCTTTCTTGTAAGTGCAGG | + |
|
Preference number: 3 (lower is better) Translates to: CERTSASIFCFH*ICAQALSCKCR Trigger: CCTGCACTTACAAGAAAGAGCCTGTGCGCATATCCAATGGAAACAGAATATGGACGCTGATGTTCTCTCACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035128.11 |
||
| 3UTR CCA 72 bp | TCCAAGACCTCCTCCAAAACCATGAAGGAGGACAAGTaGCGTCTTACTAGAAATGTTGTGAGAGAACATCAG | + |
|
Preference number: 3 (lower is better) Translates to: SKTSSKTMKEDK*RLTRNVVREHQ Trigger: CTGATGTTCTCTCACAACATTTCTAGTAAGACGCCACTTGTCCTCCTTCATGGTTTTGGAGGAGGTCTTGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035128.11 |
||
| 3UTR GCA 72 bp | TTTTTCTTTGGTGAACAAAAGACTGAGGCTGGTGACTaGCAAGTAAGAGTCCTGCACAAATGTTCTACCACT | + |
|
Preference number: 3 (lower is better) Translates to: FFFGEQKTEAGD*QVRVLHKCSTT Trigger: AGTGGTAGAACATTTGTGCAGGACTCTTACTTGGCAGTCACCAGCCTCAGTCTTTTGTTCACCAAAGAAAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000111497.5 ENSMUST00000156520.8 |
||
| 3UTR-3UTR CAA 90 bp | CAGAAGGACAACCTTTATTTAAGGCGATTATTAAATTGGGAGACTCTCCTATATATGCTGGTTCCAGAGTaGCCATCTATGCAGGATCGG | + |
|
Preference number: 3 (lower is better) Translates to: QKDNLYLRRLLNWETLLYMLVPE*PSMQDR Trigger: CCGATCCTGCATAGATGGCAACTCTGGAACCAGCAT...ATATAGGAGAGTCTCCCAATTTAATAATCGCCTTAAATAAAGGTTGTCCTTCTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035128.11 |
||
| 3UTR-3UTR CAA 90 bp | ATCACTGCACACACCATGGAAATTTTAATGTTTAGGAAGCTTCACAGGTTTCCACCTGGACAAACAATGTaGGTAACAATGCTCTTTGTT | + |
|
Preference number: 3 (lower is better) Translates to: ITAHTMEILMFRKLHRFPPGQTM*VTMLFV Trigger: AACAAAGAGCATTGTTACCAACATTGTTTGTCCAGG...TGGAAACCTGTGAAGCTTCCTAAACATTAAAATTTCCATGGTGTGTGCAGTGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111497.5 ENSMUST00000156520.8 |
||
| 3UTR CAA 72 bp | GTCCAGGAGACTGCGGGGGTCCTCGGGCTGTGGGGATaGCTCATGAACGGCACCCGTCACGGGTGCTGCATG | + |
|
Preference number: 4 (lower is better) Translates to: VQETAGVLGLWG*LMNGTRHGCCM Trigger: CATGCAGCACCCGTGACGGGTGCCGTTCATGAGCAATCCCCACAGCCCGAGGACCCCCGCAGTCTCCTGGAC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000035128.11 ENSMUST00000111497.5 ENSMUST00000156520.8 |
||
| CDS-3UTR GCA 90 bp | CCAGGAGACTGCGGGGGTCCTCGGGCTGTGGGGATTGCTCATGAACGGCACCCGCAGAGTTGCCATCTATaGAGGATCGGGCTCCAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: PGDCGGPRAVGIAHERHPQSCHL*RIGLQR Trigger: TCTTTGGAGCCCGATCCTGCATAGATGGCAACTCTG...CGGGTGCCGTTCATGAGCAATCCCCACAGCCCGAGGACCCCCGCAGTCTCCTGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000111497.5 ENSMUST00000156520.8 |
||
| CDS-3UTR CCA 90 bp | CCAGTCCAGGAGACTGCGGGGGTCCTCGGGCTGTGGGGATTGCTCATGAACGGCGCAGTGACTGGATGCTaGTTCCAGAGTTGCCATCTA | + |
|
Preference number: 4 (lower is better) Translates to: PVQETAGVLGLWGLLMNGAVTGC*FQSCHL Trigger: TAGATGGCAACTCTGGAACCAGCATCCAGTCACTGC...GCCGTTCATGAGCAATCCCCACAGCCCGAGGACCCCCGCAGTCTCCTGGACTGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000111497.5 ENSMUST00000156520.8 |
||
| CDS-3UTR CCA 90 bp | CCAGTCCAGGAGACTGCGGGGGTCCTCGGGCTGTGGGGATTGCTCATGAACGGCTTGATCAGCAAGATCTaGTCGCTCAGGAAAACCCCA | + |
|
Preference number: 4 (lower is better) Translates to: PVQETAGVLGLWGLLMNGLISKI*SLRKTP Trigger: TGGGGTTTTCCTGAGCGACCAGATCTTGCTGATCAA...GCCGTTCATGAGCAATCCCCACAGCCCGAGGACCCCCGCAGTCTCCTGGACTGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000111497.5 ENSMUST00000156520.8 |
||
| CDS-3UTR TCA 90 bp | GGGTCCTGGGAATACTGGAAGGAAAGGGGACAGGTTTCAGGTTCGGGCTACTCACTGCCCCTAGGGCCCTaGTCCAAACTGGAATTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: GSWEYWKERGQVSGSGYSLPLGP*SKLELV Trigger: GACCAATTCCAGTTTGGATCAGGGCCCTAGGGGCAG...TGAGTAGCCCGAACCTGAAACCTGTCCCCTTTCCTTCCAGTATTCCCAGGACCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111497.5 ENSMUST00000156520.8 |
||
| CDS-3UTR TCA 90 bp | TCCCTGCAAGTGAGGGGACCTAGATCCTGGGTCCTGGGAATACTGGAAGGAAAGCTGCCCCTAGGGCCCTaGTCCAAACTGGAATTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: SLQVRGPRSWVLGILEGKLPLGP*SKLELV Trigger: GACCAATTCCAGTTTGGATCAGGGCCCTAGGGGCAG...CTTTCCTTCCAGTATTCCCAGGACCCAGGATCTAGGTCCCCTCACTTGCAGGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111497.5 ENSMUST00000156520.8 |
||
| CDS-3UTR TCA 90 bp | CCAGTCCAGGAGACTGCGGGGGTCCTCGGGCTGTGGGGATTGCTCATGAACGGCGAATCGTCATGTTTTTaGAAGCTGTCTCACCACTTG | + |
|
Preference number: 4 (lower is better) Translates to: PVQETAGVLGLWGLLMNGESSCF*KLSHHL Trigger: CAAGTGGTGAGACAGCTTTCAAAAACATGACGATTC...GCCGTTCATGAGCAATCCCCACAGCCCGAGGACCCCCGCAGTCTCCTGGACTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000111497.5 ENSMUST00000156520.8 |
||
| CDS-3UTR TCA 90 bp | TCCCTGCAAGTGAGGGGACCTAGATCCTGGGTCCTGGGAATACTGGAAGGAAAGCCTCCTCCAAAACCATaGAGGAGGACAAGTGGCGTC | + |
|
Preference number: 4 (lower is better) Translates to: SLQVRGPRSWVLGILEGKPPPKP*RRTSGV Trigger: GACGCCACTTGTCCTCCTTCATGGTTTTGGAGGAGG...CTTTCCTTCCAGTATTCCCAGGACCCAGGATCTAGGTCCCCTCACTTGCAGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000156520.8 |
||
| CDS-3UTR GCA 90 bp | GGGTCCTGGGAATACTGGAAGGAAAGGGGACAGGTTTCAGGTTCGGGCTACTCATGCTGGTTCCAGAGTTaGCATCTATGCAGGATCGGG | + |
|
Preference number: 4 (lower is better) Translates to: GSWEYWKERGQVSGSGYSCWFQS*HLCRIG Trigger: CCCGATCCTGCATAGATGGCAACTCTGGAACCAGCA...TGAGTAGCCCGAACCTGAAACCTGTCCCCTTTCCTTCCAGTATTCCCAGGACCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111497.5 ENSMUST00000156520.8 |
||
| CDS-3UTR GCA 90 bp | GGGTCCTGGGAATACTGGAAGGAAAGGGGACAGGTTTCAGGTTCGGGCTACTCAGTCGCAGTGACTGGATaGTGGTTCCAGAGTTGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: GSWEYWKERGQVSGSGYSVAVTG*WFQSCH Trigger: ATGGCAACTCTGGAACCAGCATCCAGTCACTGCGAC...TGAGTAGCCCGAACCTGAAACCTGTCCCCTTTCCTTCCAGTATTCCCAGGACCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111497.5 ENSMUST00000156520.8 |
||
| CDS-3UTR CCA 90 bp | TCCCTGCAAGTGAGGGGACCTAGATCCTGGGTCCTGGGAATACTGGAAGGAAAGGAAGCATTGGCCGTTTaGCCCACCCATAAGGAATCG | + |
|
Preference number: 4 (lower is better) Translates to: SLQVRGPRSWVLGILEGKEALAV*PTHKES Trigger: CGATTCCTTATGGGTGGGCCAAACGGCCAATGCTTC...CTTTCCTTCCAGTATTCCCAGGACCCAGGATCTAGGTCCCCTCACTTGCAGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111497.5 ENSMUST00000156520.8 |
||
| 3UTR CAA 72 bp | GACTTCGGTCGCAGTGACTGGATGCTGGTTCCAGAGTaGCCATCTATGCAGGATCGGGCTCCAAAGATCACT | + |
|
Preference number: 4 (lower is better) Translates to: DFGRSDWMLVPE*PSMQDRAPKIT Trigger: AGTGATCTTTGGAGCCCGATCCTGCATAGATGGCAACTCTGGAACCAGCATCCAGTCACTGCGACCGAAGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035128.11 |
||
| 3UTR CAA 72 bp | GAATGTCAGGATGCAAGCCACCTATCCGCTGAAGCATaGGCCGTTTGGCCCACCCATAAGGAATCGTCATGT | + |
|
Preference number: 4 (lower is better) Translates to: ECQDASHLSAEA*AVWPTHKESSC Trigger: ACATGACGATTCCTTATGGGTGGGCCAAACGGCCAATGCTTCAGCGGATAGGTGGCTTGCATCCTGACATTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035128.11 |
||
| CDS-3UTR CCA 90 bp | GGTTGGTTTAAATGTGGAAAGCTGCAGAGTCCAGTCCAGGAGACTGCGGGGGTCGGCCCTGATCCAAACTaGAATTGGTCTCTCTTGATC | + |
|
Preference number: 4 (lower is better) Translates to: GWFKCGKLQSPVQETAGVGPDPN*NWSLLI Trigger: GATCAAGAGAGACCAATTCCAGTTTGGATCAGGGCC...GACCCCCGCAGTCTCCTGGACTGGACTCTGCAGCTTTCCACATTTAAACCAACC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000111497.5 ENSMUST00000156520.8 |
||
| CDS-3UTR CCA 90 bp | ATCCTGAGGCCAGCCAAGGGGTTAAAGGGAGTCAATGCTGCCCCTAGGGCCCTGATATTCTGTTTCCATTaGATATGCGCACAGGCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: ILRPAKGLKGVNAAPRALIFCFH*ICAQAL Trigger: AAGAGCCTGTGCGCATATCCAATGGAAACAGAATAT...CAGGGCCCTAGGGGCAGCATTGACTCCCTTTAACCCCTTGGCTGGCCTCAGGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000175973.2 |
||
| CDS-3UTR GCA 90 bp | AGCTTCCCAACACCTAACACCACAGGCCCAGAAGTCGCTAGGTACACTGGCATATCAGGCCTCAAACGCTaGACTAGACTTAACCCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: SFPTPNTTGPEVARYTGISGLKR*TRLNPK Trigger: TTTTGGGTTAAGTCTAGTGCAGCGTTTGAGGCCTGA...TATGCCAGTGTACCTAGCGACTTCTGGGCCTGTGGTGTTAGGTGTTGGGAAGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111497.5 ENSMUST00000156520.8 |
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| CDS-3UTR GCA 90 bp | CAAGTGAGGGGACCTAGATCCTGGGTCCTGGGAATACTGGAAGGAAAGGGGACATGTTTCCATTGGATATaGGCACAGGCTCTTTCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: QVRGPRSWVLGILEGKGTCFHWI*AQALSC Trigger: ACAAGAAAGAGCCTGTGCGCATATCCAATGGAAACA...TGTCCCCTTTCCTTCCAGTATTCCCAGGACCCAGGATCTAGGTCCCCTCACTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000156520.8 |
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| CDS-3UTR GCA 90 bp | CAGGGCCCAAAGTCCAAGACCTCCTCCAAAACCATGAAGGAGGACAAGTGGCGTTGTTTCCATTGGATATaGGCACAGGCTCTTTCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: QGPKSKTSSKTMKEDKWRCFHWI*AQALSC Trigger: ACAAGAAAGAGCCTGTGCGCATATCCAATGGAAACA...ACGCCACTTGTCCTCCTTCATGGTTTTGGAGGAGGTCTTGGACTTTGGGCCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175973.2 |
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| CDS-3UTR CCA 90 bp | TCCCTGCAAGTGAGGGGACCTAGATCCTGGGTCCTGGGAATACTGGAAGGAAAGGATCCAAACTGGAATTaGTCTCTCTTGATCAGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: SLQVRGPRSWVLGILEGKDPNWN*SLLISK Trigger: CTTGCTGATCAAGAGAGACCAATTCCAGTTTGGATC...CTTTCCTTCCAGTATTCCCAGGACCCAGGATCTAGGTCCCCTCACTTGCAGGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111497.5 ENSMUST00000156520.8 |
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| CDS-3UTR CCA 90 bp | GGCTATTTTTATTCTCAAGGTGGTGAGAACAAGCACTTTTGGTCTCACGGTGGCGAAGCATTGGCCGTTTaGCCCACCCATAAGGAATCG | + |
|
Preference number: 4 (lower is better) Translates to: GYFYSQGGENKHFWSHGGEALAV*PTHKES Trigger: CGATTCCTTATGGGTGGGCCAAACGGCCAATGCTTC...GCCACCGTGAGACCAAAAGTGCTTGTTCTCACCACCTTGAGAATAAAAATAGCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000111497.5 ENSMUST00000156520.8 |
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| CDS-3UTR CCA 90 bp | GGGTCCTGGGAATACTGGAAGGAAAGGGGACAGGTTTCAGGTTCGGGCTACTCACTGGTTGAATTCTTCTaGCTGATCTGCATACACATA | + |
|
Preference number: 4 (lower is better) Translates to: GSWEYWKERGQVSGSGYSLVEFF*LICIHI Trigger: TATGTGTATGCAGATCAGCCAGAAGAATTCAACCAG...TGAGTAGCCCGAACCTGAAACCTGTCCCCTTTCCTTCCAGTATTCCCAGGACCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111497.5 ENSMUST00000156520.8 |
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| CDS-3UTR TCA 90 bp | CTTCACAGGTTTCCAGTAAAGCAAAGCAGCTCAGTGGGGAAGTCAGTTTCTTTGGGAATTGGTCTCTCTTaGTCAGCAAGATCTGGTCGC | + |
|
Preference number: 4 (lower is better) Translates to: LHRFPVKQSSSVGKSVSLGIGLS*SARSGR Trigger: GCGACCAGATCTTGCTGATCAAGAGAGACCAATTCC...CAAAGAAACTGACTTCCCCACTGAGCTGCTTTGCTTTACTGGAAACCTGTGAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111497.5 ENSMUST00000156520.8 |
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| CDS-3UTR TCA 90 bp | AAGGAAAGGGGACAGGTTTCAGGTTCGGGCTACTCAGCACTTGAATGGCTGAGTTCTACTAAAATGAGGTaGCTAACCCTTGATGGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: KERGQVSGSGYSALEWLSSTKMR*LTLDGY Trigger: GTACCCATCAAGGGTTAGTCACCTCATTTTAGTAGA...ACTCAGCCATTCAAGTGCTGAGTAGCCCGAACCTGAAACCTGTCCCCTTTCCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000156520.8 |
||
| CDS-3UTR GCA 90 bp | GGCTACTCAGCACTTGAATGGCTGAGTCTATGCATATGTTCTCATAGAACCCTGCAGAGTTGCCATCTATaGAGGATCGGGCTCCAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: GYSALEWLSLCICSHRTLQSCHL*RIGLQR Trigger: TCTTTGGAGCCCGATCCTGCATAGATGGCAACTCTG...CAGGGTTCTATGAGAACATATGCATAGACTCAGCCATTCAAGTGCTGAGTAGCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111497.5 ENSMUST00000156520.8 |
||
| CDS-3UTR TCA 90 bp | GGCTACTCAGCACTTGAATGGCTGAGTCTATGCATATGTTCTCATAGAACCCTGGGCTCCAAAGATCACTaGAACTGGAATGTCAGGATG | + |
|
Preference number: 4 (lower is better) Translates to: GYSALEWLSLCICSHRTLGSKDH*NWNVRM Trigger: CATCCTGACATTCCAGTTTCAGTGATCTTTGGAGCC...CAGGGTTCTATGAGAACATATGCATAGACTCAGCCATTCAAGTGCTGAGTAGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111497.5 ENSMUST00000156520.8 |
||
| CDS-3UTR CCA 90 bp | GGCTATTTTTATTCTCAAGGTGGTGAGAACAAGCACTTTTGGTCTCACGGTGGCTTGATCAGCAAGATCTaGTCGCTCAGGAAAACCCCA | + |
|
Preference number: 4 (lower is better) Translates to: GYFYSQGGENKHFWSHGGLISKI*SLRKTP Trigger: TGGGGTTTTCCTGAGCGACCAGATCTTGCTGATCAA...GCCACCGTGAGACCAAAAGTGCTTGTTCTCACCACCTTGAGAATAAAAATAGCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000111497.5 ENSMUST00000156520.8 |
||
| CDS-3UTR TCA 90 bp | TCTCCTGGACAAACAATGTTGGTAACAATGCTCTTTGTTCTCTGTTCTCTAGACTCTACTAAAATGAGGTaGCTAACCCCTCCACCGGCG | + |
|
Preference number: 4 (lower is better) Translates to: SPGQTMLVTMLFVLCSLDSTKMR*LTPPPA Trigger: CGCCGGTGGAGGGGTTAGTCACCTCATTTTAGTAGA...GTCTAGAGAACAGAGAACAAAGAGCATTGTTACCAACATTGTTTGTCCAGGAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111497.5 |
||
| CDS-3UTR TCA 90 bp | AGTGTGGATCTGGCCACCCACAACACTAACTATAAAGGGGGAAAAAGGCTATTTGGCTCCAAAGATCACTaGAACTGGAATGTCAGGATG | + |
|
Preference number: 4 (lower is better) Translates to: SVDLATHNTNYKGGKRLFGSKDH*NWNVRM Trigger: CATCCTGACATTCCAGTTTCAGTGATCTTTGGAGCC...AAATAGCCTTTTTCCCCCTTTATAGTTAGTGTTGTGGGTGGCCAGATCCACACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000111497.5 ENSMUST00000156520.8 |
||
| CDS-3UTR TCA 90 bp | CTTCACAGGTTTCCAGTAAAGCAAAGCAGCTCAGTGGGGAAGTCAGTTTCTTTGATGGATTCCACAAACTaGTTCTCCACTTCTTCCGCA | + |
|
Preference number: 4 (lower is better) Translates to: LHRFPVKQSSSVGKSVSLMDSTN*FSTSSA Trigger: TGCGGAAGAAGTGGAGAATCAGTTTGTGGAATCCAT...CAAAGAAACTGACTTCCCCACTGAGCTGCTTTGCTTTACTGGAAACCTGTGAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156520.8 |
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| CDS-3UTR GCA 90 bp | GGCCTTGATCATAAAACAGGAAAACAAGGAAAGTTAACGCTAGTGATTGACTCCGTCGCAGTGACTGGATaGTGGTTCCAGAGTTGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: GLDHKTGKQGKLTLVIDSVAVTG*WFQSCH Trigger: ATGGCAACTCTGGAACCAGCATCCAGTCACTGCGAC...GGAGTCAATCACTAGCGTTAACTTTCCTTGTTTTCCTGTTTTATGATCAAGGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111497.5 ENSMUST00000156520.8 |
||
| 3UTR CAA 72 bp | ACCGTGTCATCTTCAAACATAGAGGAGTACTTCCGCTaGAAATCAGGCCTCAAACGCTGCACTAGACTTAAC | + |
|
Preference number: 4 (lower is better) Translates to: TVSSSNIEEYFR*KSGLKRCTRLN Trigger: GTTAAGTCTAGTGCAGCGTTTGAGGCCTGATTTCAAGCGGAAGTACTCCTCTATGTTTGAAGATGACACGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035128.11 ENSMUST00000175973.2 |
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| CDS-3UTR CCA 90 bp | CTTCACAGGTTTCCAGTAAAGCAAAGCAGCTCAGTGGGGAAGTCAGTTTCTTTGGATCCAAACTGGAATTaGTCTCTCTTGATCAGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: LHRFPVKQSSSVGKSVSLDPNWN*SLLISK Trigger: CTTGCTGATCAAGAGAGACCAATTCCAGTTTGGATC...CAAAGAAACTGACTTCCCCACTGAGCTGCTTTGCTTTACTGGAAACCTGTGAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111497.5 ENSMUST00000156520.8 |
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| CDS-3UTR TCA 90 bp | CTTGATCATAAAACAGGAAAACAAGGAAAGTTAACGCTAGTGATTGACTCCTGTGGAATTGGTCTCTCTTaGTCAGCAAGATCTGGTCGC | + |
|
Preference number: 4 (lower is better) Translates to: LDHKTGKQGKLTLVIDSCGIGLS*SARSGR Trigger: GCGACCAGATCTTGCTGATCAAGAGAGACCAATTCC...ACAGGAGTCAATCACTAGCGTTAACTTTCCTTGTTTTCCTGTTTTATGATCAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111497.5 ENSMUST00000156520.8 |
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| CDS-3UTR TCA 90 bp | AGAAGGCTTTCTCAGCATCCAGCTATTCCATGGAGCTTTTTCATAGTTTCAAATTCATTTTGTCCAACCTaGGGGCACATCTCCACTCTT | + |
|
Preference number: 4 (lower is better) Translates to: RRLSQHPAIPWSFFIVSNSFCPT*GHISTL Trigger: AAGAGTGGAGATGTGCCCTCAGGTTGGACAAAATGA...ATTTGAAACTATGAAAAAGCTCCATGGAATAGCTGGATGCTGAGAAAGCCTTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000156520.8 |
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| CDS-3UTR CCA 90 bp | CAGAAGGACAACCTTTATTTAAGGCGATTATTAAATTGGGAGACTCTCCTATATGCAGTGACTGGATGCTaGTTCCAGAGTTGCCATCTA | + |
|
Preference number: 4 (lower is better) Translates to: QKDNLYLRRLLNWETLLYAVTGC*FQSCHL Trigger: TAGATGGCAACTCTGGAACCAGCATCCAGTCACTGC...ATATAGGAGAGTCTCCCAATTTAATAATCGCCTTAAATAAAGGTTGTCCTTCTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111497.5 ENSMUST00000156520.8 |
||
| CDS-3UTR GCA 90 bp | GGCCTTGATCATAAAACAGGAAAACAAGGAAAGTTAACGCTAGTGATTGACTCCGCTCTTTCTTGTAAGTaGAGGGGACACATTTTAACA | + |
|
Preference number: 4 (lower is better) Translates to: GLDHKTGKQGKLTLVIDSALSCK*RGHILT Trigger: TGTTAAAATGTGTCCCCTGCACTTACAAGAAAGAGC...GGAGTCAATCACTAGCGTTAACTTTCCTTGTTTTCCTGTTTTATGATCAAGGCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000156520.8 |
||
| CDS-3UTR TCA 90 bp | CATCAGAAGGACAACCTTTATTTAAGGCGATTATTAAATTGGGAGACTCTCCTAGAATCGTCATGTTTTTaGAAGCTGTCTCACCACTTG | + |
|
Preference number: 4 (lower is better) Translates to: HQKDNLYLRRLLNWETLLESSCF*KLSHHL Trigger: CAAGTGGTGAGACAGCTTTCAAAAACATGACGATTC...TAGGAGAGTCTCCCAATTTAATAATCGCCTTAAATAAAGGTTGTCCTTCTGATG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000111497.5 ENSMUST00000156520.8 |
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| CDS-3UTR GCA 90 bp | CAGAAGGACAACCTTTATTTAAGGCGATTATTAAATTGGGAGACTCTCCTATATTCAGGCCTCAAACGCTaGACTAGACTTAACCCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: QKDNLYLRRLLNWETLLYSGLKR*TRLNPK Trigger: TTTTGGGTTAAGTCTAGTGCAGCGTTTGAGGCCTGA...ATATAGGAGAGTCTCCCAATTTAATAATCGCCTTAAATAAAGGTTGTCCTTCTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111497.5 ENSMUST00000156520.8 |
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| CDS-3UTR CCA 90 bp | CATCAGAAGGACAACCTTTATTTAAGGCGATTATTAAATTGGGAGACTCTCCTACTGGTTGAATTCTTCTaGCTGATCTGCATACACATA | + |
|
Preference number: 4 (lower is better) Translates to: HQKDNLYLRRLLNWETLLLVEFF*LICIHI Trigger: TATGTGTATGCAGATCAGCCAGAAGAATTCAACCAG...TAGGAGAGTCTCCCAATTTAATAATCGCCTTAAATAAAGGTTGTCCTTCTGATG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111497.5 ENSMUST00000156520.8 |
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| CDS-3UTR CCA 90 bp | CAGAAGGACAACCTTTATTTAAGGCGATTATTAAATTGGGAGACTCTCCTATATATATTCTGTTTCCATTaGATATGCGCACAGGCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: QKDNLYLRRLLNWETLLYIFCFH*ICAQAL Trigger: AAGAGCCTGTGCGCATATCCAATGGAAACAGAATAT...ATATAGGAGAGTCTCCCAATTTAATAATCGCCTTAAATAAAGGTTGTCCTTCTG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156520.8 |
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| CDS TCA 90 bp | TGTAGATGTGGGACACCAGGTAGGAAGCCACCCTGTCAGCCATCCTaGCCCTCCACCGGCGTCTGCCGAGTCCACCTCCTCCTCCGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: CRCGTPGRKPPCQPS*PSTGVCRVHLLLRR Trigger: GCGGCGGAGGAGGAGGTGGACTCGGCAGACGCCGGTGGAGGGTCAGGATGGCTGACAGGGTGGCTTCCTACCTGGTGTCCCACATCTACA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156520.8 |
||
| CDS-3UTR CAA 90 bp | CCAGGAGACTGCGGGGGTCCTCGGGCTGTGGGGATTGCTCATGAACGGCACCCGGGAATCGTCATGTTTTaGAAAGCTGTCTCACCACTT | + |
|
Preference number: 5 (lower is better) Translates to: PGDCGGPRAVGIAHERHPGIVMF*KAVSPL Trigger: AAGTGGTGAGACAGCTTTCAAAAACATGACGATTCC...CGGGTGCCGTTCATGAGCAATCCCCACAGCCCGAGGACCCCCGCAGTCTCCTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000111497.5 ENSMUST00000156520.8 |
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| CDS-3UTR CAA 90 bp | TTAAATGTGGAAAGCTGCAGAGTCCAGTCCAGGAGACTGCGGGGGTCCTCGGGCATGCTGGTTCCAGAGTaGCCATCTATGCAGGATCGG | + |
|
Preference number: 5 (lower is better) Translates to: LNVESCRVQSRRLRGSSGMLVPE*PSMQDR Trigger: CCGATCCTGCATAGATGGCAACTCTGGAACCAGCAT...GCCCGAGGACCCCCGCAGTCTCCTGGACTGGACTCTGCAGCTTTCCACATTTAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000111497.5 ENSMUST00000156520.8 |
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| CDS-3UTR CAA 90 bp | CAAGTGAGGGGACCTAGATCCTGGGTCCTGGGAATACTGGAAGGAAAGGGGACAGAGGAGTACTTCCGCTaGAAATCAGGCCTCAAACGC | + |
|
Preference number: 5 (lower is better) Translates to: QVRGPRSWVLGILEGKGTEEYFR*KSGLKR Trigger: GCGTTTGAGGCCTGATTTCAAGCGGAAGTACTCCTC...TGTCCCCTTTCCTTCCAGTATTCCCAGGACCCAGGATCTAGGTCCCCTCACTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111497.5 ENSMUST00000156520.8 |
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| CDS-3UTR CAA 90 bp | AGCTTCCCAACACCTAACACCACAGGCCCAGAAGTCGCTAGGTACACTGGCATAGAGGAGTACTTCCGCTaGAAATCAGGCCTCAAACGC | + |
|
Preference number: 5 (lower is better) Translates to: SFPTPNTTGPEVARYTGIEEYFR*KSGLKR Trigger: GCGTTTGAGGCCTGATTTCAAGCGGAAGTACTCCTC...TATGCCAGTGTACCTAGCGACTTCTGGGCCTGTGGTGTTAGGTGTTGGGAAGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111497.5 ENSMUST00000156520.8 |
||
| CDS-3UTR CAA 90 bp | AGCTTCCCAACACCTAACACCACAGGCCCAGAAGTCGCTAGGTACACTGGCATAATGCTGGTTCCAGAGTaGCCATCTATGCAGGATCGG | + |
|
Preference number: 5 (lower is better) Translates to: SFPTPNTTGPEVARYTGIMLVPE*PSMQDR Trigger: CCGATCCTGCATAGATGGCAACTCTGGAACCAGCAT...TATGCCAGTGTACCTAGCGACTTCTGGGCCTGTGGTGTTAGGTGTTGGGAAGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111497.5 ENSMUST00000156520.8 |
||
| CDS-3UTR CAA 90 bp | CTTCACAGGTTTCCAGTAAAGCAAAGCAGCTCAGTGGGGAAGTCAGTTTCTTTGCTCACCACTTGGGGTTaGTACATTACAGTGGTAGAT | + |
|
Preference number: 5 (lower is better) Translates to: LHRFPVKQSSSVGKSVSLLTTWG*YITVVD Trigger: ATCTACCACTGTAATGTACAAACCCCAAGTGGTGAG...CAAAGAAACTGACTTCCCCACTGAGCTGCTTTGCTTTACTGGAAACCTGTGAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111497.5 ENSMUST00000156520.8 |
||
| CDS-3UTR CAA 90 bp | GGCCTTGATCATAAAACAGGAAAACAAGGAAAGTTAACGCTAGTGATTGACTCCCCAAGCAAGATCATTTaGTCCAACCTGAGGGCACAT | + |
|
Preference number: 5 (lower is better) Translates to: GLDHKTGKQGKLTLVIDSPSKII*SNLRAH Trigger: ATGTGCCCTCAGGTTGGACAAAATGATCTTGCTTGG...GGAGTCAATCACTAGCGTTAACTTTCCTTGTTTTCCTGTTTTATGATCAAGGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000156520.8 |
||
| CDS-3UTR CAA 90 bp | CTTGATCATAAAACAGGAAAACAAGGAAAGTTAACGCTAGTGATTGACTCCTGTGTGTGGCAGATCTCCTaGACTTTCTGGTTGAATTCT | + |
|
Preference number: 5 (lower is better) Translates to: LDHKTGKQGKLTLVIDSCVWQIS*TFWLNS Trigger: AGAATTCAACCAGAAAGTCAAGGAGATCTGCCACAC...ACAGGAGTCAATCACTAGCGTTAACTTTCCTTGTTTTCCTGTTTTATGATCAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111497.5 ENSMUST00000156520.8 |
||
| CDS-3UTR CAA 90 bp | CATCAGAAGGACAACCTTTATTTAAGGCGATTATTAAATTGGGAGACTCTCCTAGTGTGGCAGATCTCCTaGACTTTCTGGTTGAATTCT | + |
|
Preference number: 5 (lower is better) Translates to: HQKDNLYLRRLLNWETLLVWQIS*TFWLNS Trigger: AGAATTCAACCAGAAAGTCAAGGAGATCTGCCACAC...TAGGAGAGTCTCCCAATTTAATAATCGCCTTAAATAAAGGTTGTCCTTCTGATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111497.5 ENSMUST00000156520.8 |
||
| CDS-3UTR CAA 90 bp | CAGAAGGACAACCTTTATTTAAGGCGATTATTAAATTGGGAGACTCTCCTATATCTCACCACTTGGGGTTaGTACATTACAGTGGTAGAT | + |
|
Preference number: 5 (lower is better) Translates to: QKDNLYLRRLLNWETLLYLTTWG*YITVVD Trigger: ATCTACCACTGTAATGTACAAACCCCAAGTGGTGAG...ATATAGGAGAGTCTCCCAATTTAATAATCGCCTTAAATAAAGGTTGTCCTTCTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111497.5 ENSMUST00000156520.8 |
||
| CDS TCA 72 bp | GGGACACCAGGTAGGAAGCCACCCTGTCAGCCATCCTaGCCCTCCACCGGCGTCTGCCGAGTCCACCTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: GTPGRKPPCQPS*PSTGVCRVHLL Trigger: GAGGAGGTGGACTCGGCAGACGCCGGTGGAGGGTCAGGATGGCTGACAGGGTGGCTTCCTACCTGGTGTCCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156520.8 |
||
| CDS GCA 72 bp | GCCCAGTTCACAGATGTGAAAGCCTCCACCGGCGTCTaGCGAGTCCACCTCCTCCTCCGCCGCCATCGCTTT | + |
|
Preference number: 6 (lower is better) Translates to: AQFTDVKASTGV*RVHLLLRRHRF Trigger: AAAGCGATGGCGGCGGAGGAGGAGGTGGACTCGGCAGACGCCGGTGGAGGCTTTCACATCTGTGAACTGGGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035128.11 |
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