Pregenerated sensors for ABHD3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000002475Ensembl transcript IDs: ENSMUST00000002549.9, ENSMUST00000117726.9, ENSMUST00000117828.9, ENSMUST00000144150.9
Found 78 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | GTTTCCCTAAGAAGTAGTTTTGCATGTCATGCTGGACCTCTTCACCCATCTGCCTCTACCCTCAGCTGTTaGAACCTGTGCTCCAAGCTG | + |
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Preference number: 2 (lower is better) Translates to: VSLRSSFACHAGPLHPSASTLSC*NLCSKL Trigger: CAGCTTGGAGCACAGGTTTCAACAGCTGAGGGTAGA...GGCAGATGGGTGAAGAGGTCCAGCATGACATGCAAAACTACTTCTTAGGGAAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117726.9 ENSMUST00000117828.9 |
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| 3UTR-3UTR TCA 90 bp | GTTTCCCTAAGAAGTAGTTTTGCATGTCATGCTGGACCTCTTCACCCATCTGCCACCTGTGCTCCAAGCTaGGCTGCTTTAACAACAGTG | + |
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Preference number: 2 (lower is better) Translates to: VSLRSSFACHAGPLHPSATCAPS*AALTTV Trigger: CACTGTTGTTAAAGCAGCTCAGCTTGGAGCACAGGT...GGCAGATGGGTGAAGAGGTCCAGCATGACATGCAAAACTACTTCTTAGGGAAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117726.9 ENSMUST00000117828.9 |
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| 3UTR-3UTR GCA 90 bp | GTTTCCCTAAGAAGTAGTTTTGCATGTCATGCTGGACCTCTTCACCCATCTGCCTGCTCCAAGCTGAGCTaGTTTAACAACAGTGGCTCA | + |
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Preference number: 2 (lower is better) Translates to: VSLRSSFACHAGPLHPSACSKLS*FNNSGS Trigger: TGAGCCACTGTTGTTAAAGCAGCTCAGCTTGGAGCA...GGCAGATGGGTGAAGAGGTCCAGCATGACATGCAAAACTACTTCTTAGGGAAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117726.9 ENSMUST00000117828.9 |
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| 3UTR-3UTR TCA 90 bp | CTACAAAGTTGTTGTGTTTCCCTAAGAAGTAGTTTTGCATGTCATGCTGGACCTTCTACCCTCAGCTGTTaGAACCTGTGCTCCAAGCTG | + |
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Preference number: 2 (lower is better) Translates to: LQSCCVSLRSSFACHAGPSTLSC*NLCSKL Trigger: CAGCTTGGAGCACAGGTTTCAACAGCTGAGGGTAGA...AGGTCCAGCATGACATGCAAAACTACTTCTTAGGGAAACACAACAACTTTGTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117726.9 ENSMUST00000117828.9 |
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| 3UTR-3UTR TCA 90 bp | CTACAAAGTTGTTGTGTTTCCCTAAGAAGTAGTTTTGCATGTCATGCTGGACCTACCTGTGCTCCAAGCTaGGCTGCTTTAACAACAGTG | + |
|
Preference number: 2 (lower is better) Translates to: LQSCCVSLRSSFACHAGPTCAPS*AALTTV Trigger: CACTGTTGTTAAAGCAGCTCAGCTTGGAGCACAGGT...AGGTCCAGCATGACATGCAAAACTACTTCTTAGGGAAACACAACAACTTTGTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117726.9 ENSMUST00000117828.9 |
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| 3UTR TCA 72 bp | GCTCTACCCTCAGCTGTTGAAACCTGTGCTCCAAGCTaGGCTGCTTTAACAACAGTGGCTCAGGCTGAATGC | + |
|
Preference number: 3 (lower is better) Translates to: ALPSAVETCAPS*AALTTVAQAEC Trigger: GCATTCAGCCTGAGCCACTGTTGTTAAAGCAGCTCAGCTTGGAGCACAGGTTTCAACAGCTGAGGGTAGAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117726.9 ENSMUST00000117828.9 |
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| 3UTR-3UTR CAA 90 bp | GTTTCCCTAAGAAGTAGTTTTGCATGTCATGCTGGACCTCTTCACCCATCTGCCCTCTACCCTCAGCTGTaGAAACCTGTGCTCCAAGCT | + |
|
Preference number: 3 (lower is better) Translates to: VSLRSSFACHAGPLHPSALYPQL*KPVLQA Trigger: AGCTTGGAGCACAGGTTTCAACAGCTGAGGGTAGAG...GGCAGATGGGTGAAGAGGTCCAGCATGACATGCAAAACTACTTCTTAGGGAAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117726.9 ENSMUST00000117828.9 |
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| 3UTR-3UTR CAA 90 bp | CTACAAAGTTGTTGTGTTTCCCTAAGAAGTAGTTTTGCATGTCATGCTGGACCTCTCTACCCTCAGCTGTaGAAACCTGTGCTCCAAGCT | + |
|
Preference number: 3 (lower is better) Translates to: LQSCCVSLRSSFACHAGPLYPQL*KPVLQA Trigger: AGCTTGGAGCACAGGTTTCAACAGCTGAGGGTAGAG...AGGTCCAGCATGACATGCAAAACTACTTCTTAGGGAAACACAACAACTTTGTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117726.9 ENSMUST00000117828.9 |
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| CDS-3UTR CCA 90 bp | TGTATGTGTGTGAGCACGTATGAGCCATGGAACATGTGTGGAGGTCAGAGGACAGTCACCACGGGACAGTaGTCCTGTAGGAAGCGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: CMCVSTYEPWNMCGGQRTVTTGQ*SCRKRL Trigger: CAGCCGCTTCCTACAGGACCACTGTCCCGTGGTGAC...TGTCCTCTGACCTCCACACATGTTCCATGGCTCATACGTGCTCACACACATACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002549.9 |
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| CDS-3UTR CCA 90 bp | GTTTCCCTAAGAAGTAGTTTTGCATGTCATGCTGGACCTCTTCACCCATCTGCCGTCACCACGGGACAGTaGTCCTGTAGGAAGCGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: VSLRSSFACHAGPLHPSAVTTGQ*SCRKRL Trigger: CAGCCGCTTCCTACAGGACCACTGTCCCGTGGTGAC...GGCAGATGGGTGAAGAGGTCCAGCATGACATGCAAAACTACTTCTTAGGGAAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117726.9 ENSMUST00000117828.9 |
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| CDS-3UTR GCA 90 bp | GTTTCCCTAAGAAGTAGTTTTGCATGTCATGCTGGACCTCTTCACCCATCTGCCCCACTGACTTCAGCCTaGGGTTTGGACTGGCATCGG | + |
|
Preference number: 4 (lower is better) Translates to: VSLRSSFACHAGPLHPSAPLTSA*GLDWHR Trigger: CCGATGCCAGTCCAAACCGCAGGCTGAAGTCAGTGG...GGCAGATGGGTGAAGAGGTCCAGCATGACATGCAAAACTACTTCTTAGGGAAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000117726.9 ENSMUST00000117828.9 |
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| CDS-3UTR TCA 90 bp | GTTTCCCTAAGAAGTAGTTTTGCATGTCATGCTGGACCTCTTCACCCATCTGCCCCTTGCTTGTTCCAGTaGGGCCAGGCAAGAGCAAGA | + |
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Preference number: 4 (lower is better) Translates to: VSLRSSFACHAGPLHPSAPCLFQ*GQARAR Trigger: TCTTGCTCTTGCCTGGCCTCACTGGAACAAGCAAGG...GGCAGATGGGTGAAGAGGTCCAGCATGACATGCAAAACTACTTCTTAGGGAAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000117726.9 ENSMUST00000117828.9 |
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| CDS-3UTR TCA 90 bp | GTTTCCCTAAGAAGTAGTTTTGCATGTCATGCTGGACCTCTTCACCCATCTGCCATCAAACCAGTCCAGTaGGATCTGTCCTCCGTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: VSLRSSFACHAGPLHPSAIKPVQ*DLSSVC Trigger: GCAGACGGAGGACAGATCTCACTGGACTGGTTTGAT...GGCAGATGGGTGAAGAGGTCCAGCATGACATGCAAAACTACTTCTTAGGGAAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117726.9 ENSMUST00000117828.9 |
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| CDS-3UTR TCA 90 bp | TTCAGCAGTGTGTTCTTTTCTTCTGCTGAGTGGGTTCTTGGCATTTCACTCCGGCAGCATTCCTCCCATTaGTACGCCTGCTGCCAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: FSSVFFSSAEWVLGISLRQHSSH*YACCQK Trigger: TTTCTGGCAGCAGGCGTATCAATGGGAGGAATGCTG...CCGGAGTGAAATGCCAAGAACCCACTCAGCAGAAGAAAAGAACACACTGCTGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002549.9 |
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| CDS-3UTR TCA 90 bp | GTTTCCCTAAGAAGTAGTTTTGCATGTCATGCTGGACCTCTTCACCCATCTGCCCCTCTCCAGAGACTCTaGGCAAGCGAAAGTGTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: VSLRSSFACHAGPLHPSAPLQRL*ASESVP Trigger: TGGAACACTTTCGCTTGCTCAGAGTCTCTGGAGAGG...GGCAGATGGGTGAAGAGGTCCAGCATGACATGCAAAACTACTTCTTAGGGAAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000117726.9 ENSMUST00000117828.9 |
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| CDS-3UTR TCA 90 bp | TGTATGTGTGTGAGCACGTATGAGCCATGGAACATGTGTGGAGGTCAGAGGACATTGGCCTTCATGACCTaGTCCATGTCAATCTGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: CMCVSTYEPWNMCGGQRTLAFMT*SMSICS Trigger: GGAGCAGATTGACATGGATCAGGTCATGAAGGCCAA...TGTCCTCTGACCTCCACACATGTTCCATGGCTCATACGTGCTCACACACATACA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002549.9 |
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| CDS-3UTR CCA 90 bp | TCTTTTTCAGCAGTGTGTTCTTTTCTTCTGCTGAGTGGGTTCTTGGCATTTCACAGGCTGTGCACGTGGTaGACGACGGCCTCCAAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: SFSAVCSFLLLSGFLAFHRLCTW*TTASKS Trigger: AGACTTGGAGGCCGTCGTCCACCACGTGCACAGCCT...GTGAAATGCCAAGAACCCACTCAGCAGAAGAAAAGAACACACTGCTGAAAAAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002549.9 |
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| CDS-3UTR GCA 90 bp | TCTTTTTCAGCAGTGTGTTCTTTTCTTCTGCTGAGTGGGTTCTTGGCATTTCACCCACTGACTTCAGCCTaGGGTTTGGACTGGCATCGG | + |
|
Preference number: 4 (lower is better) Translates to: SFSAVCSFLLLSGFLAFHPLTSA*GLDWHR Trigger: CCGATGCCAGTCCAAACCGCAGGCTGAAGTCAGTGG...GTGAAATGCCAAGAACCCACTCAGCAGAAGAAAAGAACACACTGCTGAAAAAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002549.9 |
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| CDS-3UTR CCA 90 bp | CTACAAAGTTGTTGTGTTTCCCTAAGAAGTAGTTTTGCATGTCATGCTGGACCTGTCACCACGGGACAGTaGTCCTGTAGGAAGCGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LQSCCVSLRSSFACHAGPVTTGQ*SCRKRL Trigger: CAGCCGCTTCCTACAGGACCACTGTCCCGTGGTGAC...AGGTCCAGCATGACATGCAAAACTACTTCTTAGGGAAACACAACAACTTTGTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117726.9 ENSMUST00000117828.9 |
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| CDS-3UTR CCA 90 bp | CTACAAAGTTGTTGTGTTTCCCTAAGAAGTAGTTTTGCATGTCATGCTGGACCTAGGCTGTGCACGTGGTaGACGACGGCCTCCAAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: LQSCCVSLRSSFACHAGPRLCTW*TTASKS Trigger: AGACTTGGAGGCCGTCGTCCACCACGTGCACAGCCT...AGGTCCAGCATGACATGCAAAACTACTTCTTAGGGAAACACAACAACTTTGTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117726.9 ENSMUST00000117828.9 |
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| CDS-3UTR TCA 90 bp | TCTTTTTCAGCAGTGTGTTCTTTTCTTCTGCTGAGTGGGTTCTTGGCATTTCACCCTTGCTTGTTCCAGTaGGGCCAGGCAAGAGCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: SFSAVCSFLLLSGFLAFHPCLFQ*GQARAR Trigger: TCTTGCTCTTGCCTGGCCTCACTGGAACAAGCAAGG...GTGAAATGCCAAGAACCCACTCAGCAGAAGAAAAGAACACACTGCTGAAAAAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002549.9 |
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| CDS-3UTR GCA 90 bp | CTACAAAGTTGTTGTGTTTCCCTAAGAAGTAGTTTTGCATGTCATGCTGGACCTCCACTGACTTCAGCCTaGGGTTTGGACTGGCATCGG | + |
|
Preference number: 4 (lower is better) Translates to: LQSCCVSLRSSFACHAGPPLTSA*GLDWHR Trigger: CCGATGCCAGTCCAAACCGCAGGCTGAAGTCAGTGG...AGGTCCAGCATGACATGCAAAACTACTTCTTAGGGAAACACAACAACTTTGTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117726.9 ENSMUST00000117828.9 |
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| CDS-3UTR TCA 90 bp | TCTTTTTCAGCAGTGTGTTCTTTTCTTCTGCTGAGTGGGTTCTTGGCATTTCACATCAAACCAGTCCAGTaGGATCTGTCCTCCGTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: SFSAVCSFLLLSGFLAFHIKPVQ*DLSSVC Trigger: GCAGACGGAGGACAGATCTCACTGGACTGGTTTGAT...GTGAAATGCCAAGAACCCACTCAGCAGAAGAAAAGAACACACTGCTGAAAAAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002549.9 |
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| CDS-3UTR TCA 90 bp | TCTTTTTCAGCAGTGTGTTCTTTTCTTCTGCTGAGTGGGTTCTTGGCATTTCACCCTCTCCAGAGACTCTaGGCAAGCGAAAGTGTTCCA | + |
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Preference number: 4 (lower is better) Translates to: SFSAVCSFLLLSGFLAFHPLQRL*ASESVP Trigger: TGGAACACTTTCGCTTGCTCAGAGTCTCTGGAGAGG...GTGAAATGCCAAGAACCCACTCAGCAGAAGAAAAGAACACACTGCTGAAAAAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002549.9 |
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| CDS-3UTR TCA 90 bp | CTACAAAGTTGTTGTGTTTCCCTAAGAAGTAGTTTTGCATGTCATGCTGGACCTAGTTTCATGGCTGGGTaGGAACACGTCGTCCGTAGC | + |
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Preference number: 4 (lower is better) Translates to: LQSCCVSLRSSFACHAGPSFMAG*EHVVRS Trigger: GCTACGGACGACGTGTTCTCACCCAGCCATGAAACT...AGGTCCAGCATGACATGCAAAACTACTTCTTAGGGAAACACAACAACTTTGTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117726.9 |
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| CDS-3UTR TCA 90 bp | CTACAAAGTTGTTGTGTTTCCCTAAGAAGTAGTTTTGCATGTCATGCTGGACCTATCAAACCAGTCCAGTaGGATCTGTCCTCCGTCTGC | + |
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Preference number: 4 (lower is better) Translates to: LQSCCVSLRSSFACHAGPIKPVQ*DLSSVC Trigger: GCAGACGGAGGACAGATCTCACTGGACTGGTTTGAT...AGGTCCAGCATGACATGCAAAACTACTTCTTAGGGAAACACAACAACTTTGTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117726.9 ENSMUST00000117828.9 |
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| CDS-3UTR TCA 90 bp | CTACAAAGTTGTTGTGTTTCCCTAAGAAGTAGTTTTGCATGTCATGCTGGACCTCAGCATTCCTCCCATTaGTACGCCTGCTGCCAGAAA | + |
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Preference number: 4 (lower is better) Translates to: LQSCCVSLRSSFACHAGPQHSSH*YACCQK Trigger: TTTCTGGCAGCAGGCGTATCAATGGGAGGAATGCTG...AGGTCCAGCATGACATGCAAAACTACTTCTTAGGGAAACACAACAACTTTGTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117726.9 ENSMUST00000117828.9 |
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| CDS-3UTR TCA 90 bp | GTTTCCCTAAGAAGTAGTTTTGCATGTCATGCTGGACCTCTTCACCCATCTGCCCCTGTACAAATTGCTTaGAGACTCGATCCATGTAAG | + |
|
Preference number: 4 (lower is better) Translates to: VSLRSSFACHAGPLHPSAPVQIA*RLDPCK Trigger: CTTACATGGATCGAGTCTTCAAGCAATTTGTACAGG...GGCAGATGGGTGAAGAGGTCCAGCATGACATGCAAAACTACTTCTTAGGGAAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000117726.9 ENSMUST00000117828.9 |
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| CDS-3UTR GCA 90 bp | GTTTCCCTAAGAAGTAGTTTTGCATGTCATGCTGGACCTCTTCACCCATCTGCCGATCTGTCCTCCGTCTaGAGTTTTAATGAGTTCGTT | + |
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Preference number: 4 (lower is better) Translates to: VSLRSSFACHAGPLHPSADLSSV*SFNEFV Trigger: AACGAACTCATTAAAACTGCAGACGGAGGACAGATC...GGCAGATGGGTGAAGAGGTCCAGCATGACATGCAAAACTACTTCTTAGGGAAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000117726.9 ENSMUST00000117828.9 |
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| CDS-3UTR GCA 90 bp | GTTTCCCTAAGAAGTAGTTTTGCATGTCATGCTGGACCTCTTCACCCATCTGCCATGGCCTGTACAAATTaGTTGAAGACTCGATCCATG | + |
|
Preference number: 4 (lower is better) Translates to: VSLRSSFACHAGPLHPSAMACTN*LKTRSM Trigger: CATGGATCGAGTCTTCAAGCAATTTGTACAGGCCAT...GGCAGATGGGTGAAGAGGTCCAGCATGACATGCAAAACTACTTCTTAGGGAAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117726.9 ENSMUST00000117828.9 |
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| CDS-3UTR TCA 90 bp | CTACAAAGTTGTTGTGTTTCCCTAAGAAGTAGTTTTGCATGTCATGCTGGACCTTTGGCCTTCATGACCTaGTCCATGTCAATCTGCTCC | + |
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Preference number: 4 (lower is better) Translates to: LQSCCVSLRSSFACHAGPLAFMT*SMSICS Trigger: GGAGCAGATTGACATGGATCAGGTCATGAAGGCCAA...AGGTCCAGCATGACATGCAAAACTACTTCTTAGGGAAACACAACAACTTTGTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117726.9 ENSMUST00000117828.9 |
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| CDS-3UTR GCA 90 bp | AGCCATGGAACATGTGTGGAGGTCAGAGGACATCTTTTTCAGCAGTGTGTTCTTGATCTGTCCTCCGTCTaGAGTTTTAATGAGTTCGTT | + |
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Preference number: 4 (lower is better) Translates to: SHGTCVEVRGHLFQQCVLDLSSV*SFNEFV Trigger: AACGAACTCATTAAAACTGCAGACGGAGGACAGATC...AAGAACACACTGCTGAAAAAGATGTCCTCTGACCTCCACACATGTTCCATGGCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002549.9 |
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| CDS-3UTR CCA 90 bp | CTACAAAGTTGTTGTGTTTCCCTAAGAAGTAGTTTTGCATGTCATGCTGGACCTTCTATTGGGATAGCATaGCTGGGTGAGAACACGTCG | + |
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Preference number: 4 (lower is better) Translates to: LQSCCVSLRSSFACHAGPSIGIA*LGENTS Trigger: CGACGTGTTCTCACCCAGCCATGCTATCCCAATAGA...AGGTCCAGCATGACATGCAAAACTACTTCTTAGGGAAACACAACAACTTTGTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117828.9 |
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| CDS-3UTR GCA 90 bp | TTCAGCAGTGTGTTCTTTTCTTCTGCTGAGTGGGTTCTTGGCATTTCACTCCGGCAAGAGACTTTCTCCTaGTACTCCTCTGTTATTAAA | + |
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Preference number: 4 (lower is better) Translates to: FSSVFFSSAEWVLGISLRQETFS*YSSVIK Trigger: TTTAATAACAGAGGAGTAGCAGGAGAAAGTCTCTTG...CCGGAGTGAAATGCCAAGAACCCACTCAGCAGAAGAAAAGAACACACTGCTGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002549.9 |
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| CDS-3UTR GCA 90 bp | GTTTCCCTAAGAAGTAGTTTTGCATGTCATGCTGGACCTCTTCACCCATCTGCCCAAGAGACTTTCTCCTaGTACTCCTCTGTTATTAAA | + |
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Preference number: 4 (lower is better) Translates to: VSLRSSFACHAGPLHPSAQETFS*YSSVIK Trigger: TTTAATAACAGAGGAGTAGCAGGAGAAAGTCTCTTG...GGCAGATGGGTGAAGAGGTCCAGCATGACATGCAAAACTACTTCTTAGGGAAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117726.9 ENSMUST00000117828.9 |
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| CDS-3UTR TCA 90 bp | CTACAAAGTTGTTGTGTTTCCCTAAGAAGTAGTTTTGCATGTCATGCTGGACCTCCTGTACAAATTGCTTaGAGACTCGATCCATGTAAG | + |
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Preference number: 4 (lower is better) Translates to: LQSCCVSLRSSFACHAGPPVQIA*RLDPCK Trigger: CTTACATGGATCGAGTCTTCAAGCAATTTGTACAGG...AGGTCCAGCATGACATGCAAAACTACTTCTTAGGGAAACACAACAACTTTGTAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117726.9 ENSMUST00000117828.9 |
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| CDS-3UTR GCA 90 bp | CTACAAAGTTGTTGTGTTTCCCTAAGAAGTAGTTTTGCATGTCATGCTGGACCTGATCTGTCCTCCGTCTaGAGTTTTAATGAGTTCGTT | + |
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Preference number: 4 (lower is better) Translates to: LQSCCVSLRSSFACHAGPDLSSV*SFNEFV Trigger: AACGAACTCATTAAAACTGCAGACGGAGGACAGATC...AGGTCCAGCATGACATGCAAAACTACTTCTTAGGGAAACACAACAACTTTGTAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000117726.9 ENSMUST00000117828.9 |
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| CDS-3UTR GCA 90 bp | CTACAAAGTTGTTGTGTTTCCCTAAGAAGTAGTTTTGCATGTCATGCTGGACCTATGGCCTGTACAAATTaGTTGAAGACTCGATCCATG | + |
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Preference number: 4 (lower is better) Translates to: LQSCCVSLRSSFACHAGPMACTN*LKTRSM Trigger: CATGGATCGAGTCTTCAAGCAATTTGTACAGGCCAT...AGGTCCAGCATGACATGCAAAACTACTTCTTAGGGAAACACAACAACTTTGTAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117726.9 ENSMUST00000117828.9 |
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| CDS GCA 90 bp | ATTGATACGCCTGCTGCCAGAAAAGGAGCCCCAGGGTACAGGCTGTaGACGTGGTGGACGACGGCCTCCAAGTCTTCAGTGTTCGCACAG | + |
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Preference number: 5 (lower is better) Translates to: IDTPAARKGAPGYRL*TWWTTASKSSVFAQ Trigger: CTGTGCGAACACTGAAGACTTGGAGGCCGTCGTCCACCACGTGCACAGCCTGTACCCTGGGGCTCCTTTTCTGGCAGCAGGCGTATCAAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000002549.9 ENSMUST00000117726.9 ENSMUST00000117828.9 |
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| CDS TCA 90 bp | ACTCAGGTAGTAGCAAGCATAGGCAACGCTGAATCCCAAGATCAGTaGCAAGCCCACGCCCGAGCCGAAGAAGCCGACGCGAACCTGGTG | + |
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Preference number: 5 (lower is better) Translates to: TQVVASIGNAESQDQ*QAHARAEEADANLV Trigger: CACCAGGTTCGCGTCGGCTTCTTCGGCTCGGGCGTGGGCTTGTCACTGATCTTGGGATTCAGCGTTGCCTATGCTTGCTACTACCTGAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002549.9 ENSMUST00000117726.9 ENSMUST00000117828.9 |
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| CDS TCA 90 bp | GTTTCTTGGCAATGCTACTCAGGTAGTAGCAAGCATAGGCAACGCTaGATCCCAAGATCAGTGACAAGCCCACGCCCGAGCCGAAGAAGC | + |
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Preference number: 5 (lower is better) Translates to: VSWQCYSGSSKHRQR*IPRSVTSPRPSRRS Trigger: GCTTCTTCGGCTCGGGCGTGGGCTTGTCACTGATCTTGGGATTCAGCGTTGCCTATGCTTGCTACTACCTGAGTAGCATTGCCAAGAAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002549.9 ENSMUST00000117726.9 ENSMUST00000117828.9 |
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| CDS TCA 90 bp | GAACACGTCGTCCGTAGCATTCAGGCACAGAACAGGGATTCCCACTaGCTTCAGCCTGCGGTTTGGACTGGCATCGGTGTAGTAATCATC | + |
|
Preference number: 5 (lower is better) Translates to: EHVVRSIQAQNRDSH*LQPAVWTGIGVVII Trigger: GATGATTACTACACCGATGCCAGTCCAAACCGCAGGCTGAAGTCAGTGGGAATCCCTGTTCTGTGCCTGAATGCTACGGACGACGTGTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002549.9 ENSMUST00000117726.9 ENSMUST00000117828.9 ENSMUST00000144150.9 |
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| CDS TCA 90 bp | GATTCCCTCCAGAAAACCAATATGGCCTCCATAGGCATGGCTGGGTaGGAACACGTCGTCCGTAGCATTCAGGCACAGAACAGGGATTCC | + |
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Preference number: 5 (lower is better) Translates to: DSLQKTNMASIGMAG*EHVVRSIQAQNRDS Trigger: GGAATCCCTGTTCTGTGCCTGAATGCTACGGACGACGTGTTCTCACCCAGCCATGCCTATGGAGGCCATATTGGTTTTCTGGAGGGAATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144150.9 |
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| CDS TCA 90 bp | AATAGGTTTCTGTCACCACGGGACAGTGGTCCTGTAGGAAGCGGCTaGAACTCTCCCCTCCAATCACTAACTGGGGTTTCTTGGCAATGC | + |
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Preference number: 5 (lower is better) Translates to: NRFLSPRDSGPVGSG*NSPLQSLTGVSWQC Trigger: GCATTGCCAAGAAACCCCAGTTAGTGATTGGAGGGGAGAGTTTCAGCCGCTTCCTACAGGACCACTGTCCCGTGGTGACAGAAACCTATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000002549.9 ENSMUST00000117726.9 ENSMUST00000117828.9 |
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| CDS TCA 90 bp | GACCAAAGCCACGTTAGGGTTTTGTTTAGCAGTTTCATGGCTGGGTaGGAACACGTCGTCCGTAGCATTCAGGCACAGAACAGGGATTCC | + |
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Preference number: 5 (lower is better) Translates to: DQSHVRVLFSSFMAG*EHVVRSIQAQNRDS Trigger: GGAATCCCTGTTCTGTGCCTGAATGCTACGGACGACGTGTTCTCACCCAGCCATGAAACTGCTAAACAAAACCCTAACGTGGCTTTGGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117726.9 |
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| CDS CCA 90 bp | GCTGTAAGGACCAAAGCCACGTTAGGGTTTTGTTTAGCAGTTTCATaGCTGGGTGAGAACACGTCGTCCGTAGCATTCAGGCACAGAACA | + |
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Preference number: 5 (lower is better) Translates to: AVRTKATLGFCLAVS*LGENTSSVAFRHRT Trigger: TGTTCTGTGCCTGAATGCTACGGACGACGTGTTCTCACCCAGCCATGAAACTGCTAAACAAAACCCTAACGTGGCTTTGGTCCTTACAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117726.9 |
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| CDS-3UTR CAA 90 bp | GTTTCCCTAAGAAGTAGTTTTGCATGTCATGCTGGACCTCTTCACCCATCTGCCTATTGCACCGGGGGTTaGGAAGTGATGAAGGGTCTC | + |
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Preference number: 5 (lower is better) Translates to: VSLRSSFACHAGPLHPSAYCTGG*EVMKGL Trigger: GAGACCCTTCATCACTTCCAAACCCCCGGTGCAATA...GGCAGATGGGTGAAGAGGTCCAGCATGACATGCAAAACTACTTCTTAGGGAAAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000117726.9 ENSMUST00000117828.9 |
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| CDS TCA 90 bp | GTTAGGGTTTTGTTTAGCAGTTTCTATTGGGATAGCATGGCTGGGTaGGAACACGTCGTCCGTAGCATTCAGGCACAGAACAGGGATTCC | + |
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Preference number: 5 (lower is better) Translates to: VRVLFSSFYWDSMAG*EHVVRSIQAQNRDS Trigger: GGAATCCCTGTTCTGTGCCTGAATGCTACGGACGACGTGTTCTCACCCAGCCATGCTATCCCAATAGAAACTGCTAAACAAAACCCTAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117828.9 |
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| CDS CCA 90 bp | AAAGCCACGTTAGGGTTTTGTTTAGCAGTTTCTATTGGGATAGCATaGCTGGGTGAGAACACGTCGTCCGTAGCATTCAGGCACAGAACA | + |
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Preference number: 5 (lower is better) Translates to: KATLGFCLAVSIGIA*LGENTSSVAFRHRT Trigger: TGTTCTGTGCCTGAATGCTACGGACGACGTGTTCTCACCCAGCCATGCTATCCCAATAGAAACTGCTAAACAAAACCCTAACGTGGCTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117828.9 |
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| CDS-3UTR CAA 90 bp | TCTTTTTCAGCAGTGTGTTCTTTTCTTCTGCTGAGTGGGTTCTTGGCATTTCACGCAGCATTCCTCCCATaGATACGCCTGCTGCCAGAA | + |
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Preference number: 5 (lower is better) Translates to: SFSAVCSFLLLSGFLAFHAAFLP*IRLLPE Trigger: TTCTGGCAGCAGGCGTATCAATGGGAGGAATGCTGC...GTGAAATGCCAAGAACCCACTCAGCAGAAGAAAAGAACACACTGCTGAAAAAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002549.9 |
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| CDS-3UTR CAA 90 bp | AGCCATGGAACATGTGTGGAGGTCAGAGGACATCTTTTTCAGCAGTGTGTTCTTGCCATCAGAGGGGTTTaGGACCCAATTTTACCCAAG | + |
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Preference number: 5 (lower is better) Translates to: SHGTCVEVRGHLFQQCVLAIRGV*DPILPK Trigger: CTTGGGTAAAATTGGGTCCAAAACCCCTCTGATGGC...AAGAACACACTGCTGAAAAAGATGTCCTCTGACCTCCACACATGTTCCATGGCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000002549.9 |
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| CDS-3UTR CAA 90 bp | TCTTTTTCAGCAGTGTGTTCTTTTCTTCTGCTGAGTGGGTTCTTGGCATTTCACTATTGCACCGGGGGTTaGGAAGTGATGAAGGGTCTC | + |
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Preference number: 5 (lower is better) Translates to: SFSAVCSFLLLSGFLAFHYCTGG*EVMKGL Trigger: GAGACCCTTCATCACTTCCAAACCCCCGGTGCAATA...GTGAAATGCCAAGAACCCACTCAGCAGAAGAAAAGAACACACTGCTGAAAAAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000002549.9 |
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| CDS-3UTR CAA 90 bp | CTACAAAGTTGTTGTGTTTCCCTAAGAAGTAGTTTTGCATGTCATGCTGGACCTGCAGCATTCCTCCCATaGATACGCCTGCTGCCAGAA | + |
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Preference number: 5 (lower is better) Translates to: LQSCCVSLRSSFACHAGPAAFLP*IRLLPE Trigger: TTCTGGCAGCAGGCGTATCAATGGGAGGAATGCTGC...AGGTCCAGCATGACATGCAAAACTACTTCTTAGGGAAACACAACAACTTTGTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117726.9 ENSMUST00000117828.9 |
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| CDS TCA 90 bp | GGCATCCACATAGTACGCACTGTTATTGTTATCAAACCAGTCCAGTaGGATCTGTCCTCCGTCTGCAGTTTTAATGAGTTCGTTCCTGTA | + |
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Preference number: 5 (lower is better) Translates to: GIHIVRTVIVIKPVQ*DLSSVCSFNEFVPV Trigger: TACAGGAACGAACTCATTAAAACTGCAGACGGAGGACAGATCTCACTGGACTGGTTTGATAACAATAACAGTGCGTACTATGTGGATGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002549.9 ENSMUST00000117726.9 ENSMUST00000117828.9 |
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| CDS-3UTR CAA 90 bp | CTACAAAGTTGTTGTGTTTCCCTAAGAAGTAGTTTTGCATGTCATGCTGGACCTATCCATGTAAGTGCATaGCCTAGGCCAGATTCCCTC | + |
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Preference number: 5 (lower is better) Translates to: LQSCCVSLRSSFACHAGPIHVSA*PRPDSL Trigger: GAGGGAATCTGGCCTAGGCAATGCACTTACATGGAT...AGGTCCAGCATGACATGCAAAACTACTTCTTAGGGAAACACAACAACTTTGTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117726.9 ENSMUST00000117828.9 |
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| CDS-3UTR CAA 90 bp | CTACAAAGTTGTTGTGTTTCCCTAAGAAGTAGTTTTGCATGTCATGCTGGACCTCATGGCCTGTACAAATaGCTTGAAGACTCGATCCAT | + |
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Preference number: 5 (lower is better) Translates to: LQSCCVSLRSSFACHAGPHGLYK*LEDSIH Trigger: ATGGATCGAGTCTTCAAGCAATTTGTACAGGCCATG...AGGTCCAGCATGACATGCAAAACTACTTCTTAGGGAAACACAACAACTTTGTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117726.9 ENSMUST00000117828.9 |
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| CDS GCA 72 bp | CCTGCTGCCAGAAAAGGAGCCCCAGGGTACAGGCTGTaGACGTGGTGGACGACGGCCTCCAAGTCTTCAGTG | + |
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Preference number: 6 (lower is better) Translates to: PAARKGAPGYRL*TWWTTASKSSV Trigger: CACTGAAGACTTGGAGGCCGTCGTCCACCACGTGCACAGCCTGTACCCTGGGGCTCCTTTTCTGGCAGCAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000002549.9 ENSMUST00000117726.9 ENSMUST00000117828.9 |
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| CDS TCA 72 bp | GTAGCAAGCATAGGCAACGCTGAATCCCAAGATCAGTaGCAAGCCCACGCCCGAGCCGAAGAAGCCGACGCG | + |
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Preference number: 6 (lower is better) Translates to: VASIGNAESQDQ*QAHARAEEADA Trigger: CGCGTCGGCTTCTTCGGCTCGGGCGTGGGCTTGTCACTGATCTTGGGATTCAGCGTTGCCTATGCTTGCTAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002549.9 ENSMUST00000117726.9 ENSMUST00000117828.9 |
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| CDS TCA 72 bp | TCAGGCGTGGTGGCAAGCCCCTGTACCATGGCTGGGTaGGAACACGTCGTCCGTAGCATTCAGGCACAGAAC | + |
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Preference number: 6 (lower is better) Translates to: SGVVASPCTMAG*EHVVRSIQAQN Trigger: GTTCTGTGCCTGAATGCTACGGACGACGTGTTCTCACCCAGCCATGGTACAGGGGCTTGCCACCACGCCTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002549.9 |
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| CDS TCA 72 bp | CTGTCACCACGGGACAGTGGTCCTGTAGGAAGCGGCTaGAACTCTCCCCTCCAATCACTAACTGGGGTTTCT | + |
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Preference number: 6 (lower is better) Translates to: LSPRDSGPVGSG*NSPLQSLTGVS Trigger: AGAAACCCCAGTTAGTGATTGGAGGGGAGAGTTTCAGCCGCTTCCTACAGGACCACTGTCCCGTGGTGACAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000002549.9 ENSMUST00000117726.9 ENSMUST00000117828.9 |
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| CDS CCA 72 bp | CAGGGATTCCCACTGACTTCAGCCTGCGGTTTGGACTaGCATCGGTGTAGTAATCATCGAGTGTGCGGTACC | + |
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Preference number: 6 (lower is better) Translates to: QGFPLTSACGLD*HRCSNHRVCGT Trigger: GGTACCGCACACTCGATGATTACTACACCGATGCCAGTCCAAACCGCAGGCTGAAGTCAGTGGGAATCCCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002549.9 ENSMUST00000117726.9 ENSMUST00000117828.9 ENSMUST00000144150.9 |
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| CDS TCA 72 bp | CAATGCTACTCAGGTAGTAGCAAGCATAGGCAACGCTaGATCCCAAGATCAGTGACAAGCCCACGCCCGAGC | + |
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Preference number: 6 (lower is better) Translates to: QCYSGSSKHRQR*IPRSVTSPRPS Trigger: GCTCGGGCGTGGGCTTGTCACTGATCTTGGGATTCAGCGTTGCCTATGCTTGCTACTACCTGAGTAGCATTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002549.9 ENSMUST00000117726.9 ENSMUST00000117828.9 |
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| CDS CAA 90 bp | CATTCAGGCACAGAACAGGGATTCCCACTGACTTCAGCCTGCGGTTaGGACTGGCATCGGTGTAGTAATCATCGAGTGTGCGGTACCCAA | + |
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Preference number: 6 (lower is better) Translates to: HSGTEQGFPLTSACG*DWHRCSNHRVCGTQ Trigger: TTGGGTACCGCACACTCGATGATTACTACACCGATGCCAGTCCAAACCGCAGGCTGAAGTCAGTGGGAATCCCTGTTCTGTGCCTGAATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002549.9 ENSMUST00000117726.9 ENSMUST00000117828.9 ENSMUST00000144150.9 |
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| CDS TCA 72 bp | CAGAAAACCAATATGGCCTCCATAGGCATGGCTGGGTaGGAACACGTCGTCCGTAGCATTCAGGCACAGAAC | + |
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Preference number: 6 (lower is better) Translates to: QKTNMASIGMAG*EHVVRSIQAQN Trigger: GTTCTGTGCCTGAATGCTACGGACGACGTGTTCTCACCCAGCCATGCCTATGGAGGCCATATTGGTTTTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144150.9 |
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| CDS GCA 72 bp | TCAGGCACAGAACAGGGATTCCCACTGACTTCAGCCTaGGGTTTGGACTGGCATCGGTGTAGTAATCATCGA | + |
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Preference number: 6 (lower is better) Translates to: SGTEQGFPLTSA*GLDWHRCSNHR Trigger: TCGATGATTACTACACCGATGCCAGTCCAAACCGCAGGCTGAAGTCAGTGGGAATCCCTGTTCTGTGCCTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002549.9 ENSMUST00000117726.9 ENSMUST00000117828.9 ENSMUST00000144150.9 |
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| CDS CAA 72 bp | ACAGAACAGGGATTCCCACTGACTTCAGCCTGCGGTTaGGACTGGCATCGGTGTAGTAATCATCGAGTGTGC | + |
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Preference number: 6 (lower is better) Translates to: TEQGFPLTSACG*DWHRCSNHRVC Trigger: GCACACTCGATGATTACTACACCGATGCCAGTCCAAACCGCAGGCTGAAGTCAGTGGGAATCCCTGTTCTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002549.9 ENSMUST00000117726.9 ENSMUST00000117828.9 ENSMUST00000144150.9 |
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| CDS CAA 90 bp | CCGTCTGCAGTTTTAATGAGTTCGTTCCTGTATTGCACCGGGGGTTaGGAAGTGATGAAGGGTCTCAGCAATGTCTGTCCTCGGCTCTCC | + |
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Preference number: 6 (lower is better) Translates to: PSAVLMSSFLYCTGG*EVMKGLSNVCPRLS Trigger: GGAGAGCCGAGGACAGACATTGCTGAGACCCTTCATCACTTCCAAACCCCCGGTGCAATACAGGAACGAACTCATTAAAACTGCAGACGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000002549.9 ENSMUST00000117726.9 ENSMUST00000117828.9 |
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| CDS TCA 72 bp | CACGTTAGGGTTTTGTTTAGCAGTTTCATGGCTGGGTaGGAACACGTCGTCCGTAGCATTCAGGCACAGAAC | + |
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Preference number: 6 (lower is better) Translates to: HVRVLFSSFMAG*EHVVRSIQAQN Trigger: GTTCTGTGCCTGAATGCTACGGACGACGTGTTCTCACCCAGCCATGAAACTGCTAAACAAAACCCTAACGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117726.9 |
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| CDS CCA 72 bp | CTCCAAGTCTTCAGTGTTCGCACAGCAGTAAGTCCGTaGTGTCAAGAGACTTTCTCCTGCTACTCCTCTGTT | + |
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Preference number: 6 (lower is better) Translates to: LQVFSVRTAVSP*CQETFSCYSSV Trigger: AACAGAGGAGTAGCAGGAGAAAGTCTCTTGACACCACGGACTTACTGCTGTGCGAACACTGAAGACTTGGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002549.9 ENSMUST00000117726.9 ENSMUST00000117828.9 |
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| CDS CCA 72 bp | ACCAAAGCCACGTTAGGGTTTTGTTTAGCAGTTTCATaGCTGGGTGAGAACACGTCGTCCGTAGCATTCAGG | + |
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Preference number: 6 (lower is better) Translates to: TKATLGFCLAVS*LGENTSSVAFR Trigger: CCTGAATGCTACGGACGACGTGTTCTCACCCAGCCATGAAACTGCTAAACAAAACCCTAACGTGGCTTTGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117726.9 |
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| CDS TCA 72 bp | TTGTTTAGCAGTTTCTATTGGGATAGCATGGCTGGGTaGGAACACGTCGTCCGTAGCATTCAGGCACAGAAC | + |
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Preference number: 6 (lower is better) Translates to: LFSSFYWDSMAG*EHVVRSIQAQN Trigger: GTTCTGTGCCTGAATGCTACGGACGACGTGTTCTCACCCAGCCATGCTATCCCAATAGAAACTGCTAAACAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117828.9 |
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| CDS CAA 90 bp | CATGTTGGAGAGTTCATGTCCGTGCTCAACCATGGCCTGTACAAATaGCTTGAAGACTCGATCCATGTAAGTGCATTGCCTAGGCCAGAT | + |
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Preference number: 6 (lower is better) Translates to: HVGEFMSVLNHGLYK*LEDSIHVSALPRPD Trigger: ATCTGGCCTAGGCAATGCACTTACATGGATCGAGTCTTCAAGCAATTTGTACAGGCCATGGTTGAGCACGGACATGAACTCTCCAACATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117726.9 ENSMUST00000117828.9 |
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| CDS CAA 90 bp | CATGGCCTGTACAAATTGCTTGAAGACTCGATCCATGTAAGTGCATaGCCTAGGCCAGATTCCCTCCAGAAAACCAATATGGCCTCCATA | + |
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Preference number: 6 (lower is better) Translates to: HGLYKLLEDSIHVSA*PRPDSLQKTNMASI Trigger: TATGGAGGCCATATTGGTTTTCTGGAGGGAATCTGGCCTAGGCAATGCACTTACATGGATCGAGTCTTCAAGCAATTTGTACAGGCCATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117726.9 ENSMUST00000117828.9 |
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| CDS CCA 72 bp | TTAGGGTTTTGTTTAGCAGTTTCTATTGGGATAGCATaGCTGGGTGAGAACACGTCGTCCGTAGCATTCAGG | + |
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Preference number: 6 (lower is better) Translates to: LGFCLAVSIGIA*LGENTSSVAFR Trigger: CCTGAATGCTACGGACGACGTGTTCTCACCCAGCCATGCTATCCCAATAGAAACTGCTAAACAAAACCCTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117828.9 |
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| CDS CAA 72 bp | GTTTTAATGAGTTCGTTCCTGTATTGCACCGGGGGTTaGGAAGTGATGAAGGGTCTCAGCAATGTCTGTCCT | + |
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Preference number: 6 (lower is better) Translates to: VLMSSFLYCTGG*EVMKGLSNVCP Trigger: AGGACAGACATTGCTGAGACCCTTCATCACTTCCAAACCCCCGGTGCAATACAGGAACGAACTCATTAAAAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000002549.9 ENSMUST00000117726.9 ENSMUST00000117828.9 |
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| CDS CAA 72 bp | GAGTTCATGTCCGTGCTCAACCATGGCCTGTACAAATaGCTTGAAGACTCGATCCATGTAAGTGCATTGCCT | + |
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Preference number: 6 (lower is better) Translates to: EFMSVLNHGLYK*LEDSIHVSALP Trigger: AGGCAATGCACTTACATGGATCGAGTCTTCAAGCAATTTGTACAGGCCATGGTTGAGCACGGACATGAACTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117726.9 ENSMUST00000117828.9 |
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| CDS CAA 72 bp | TCCATAGGCTGTAAGGACCAAAGCCACGTTAGGGTTTaGTTTAGCAGTTTCTATTGGGATAGCATGGCTGGG | + |
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Preference number: 6 (lower is better) Translates to: SIGCKDQSHVRV*FSSFYWDSMAG Trigger: CCCAGCCATGCTATCCCAATAGAAACTGCTAAACAAAACCCTAACGTGGCTTTGGTCCTTACAGCCTATGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117828.9 |
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| CDS TCA 72 bp | ATAGTACGCACTGTTATTGTTATCAAACCAGTCCAGTaGGATCTGTCCTCCGTCTGCAGTTTTAATGAGTTC | + |
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Preference number: 6 (lower is better) Translates to: IVRTVIVIKPVQ*DLSSVCSFNEF Trigger: GAACTCATTAAAACTGCAGACGGAGGACAGATCTCACTGGACTGGTTTGATAACAATAACAGTGCGTACTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002549.9 ENSMUST00000117726.9 ENSMUST00000117828.9 |
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