Pregenerated sensors for ABHD17C (Mus musculus)
Ensembl gene IDs: ENSMUSG00000038459Ensembl transcript IDs: ENSMUST00000117085.2
Found 47 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CAGCCCTGGGAACCAGTCCTCATGGTCAGCTCTCGTTCCCACTCCTaGAAGGTCTTGCAGCTGAGAATCCAGCTGCTCAGCCTAATGGAA | + |
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Preference number: 1 (lower is better) Translates to: QPWEPVLMVSSRSHS*KVLQLRIQLLSLME Trigger: TTCCATTAGGCTGAGCAGCTGGATTCTCAGCTGCAAGACCTTGCAGGAGTGGGAACGAGAGCTGACCATGAGGACTGGTTCCCAGGGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117085.2 |
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| 3UTR-3UTR TCA 90 bp | TCACACTTTAGTCTACAGCCCTGGGAACCAGTCCTCATGGTCAGCTCTCGTTCCGCAAGGTCTTGCAGCTaGGAATCCAGCTGCTCAGCC | + |
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Preference number: 2 (lower is better) Translates to: SHFSLQPWEPVLMVSSRSARSCS*ESSCSA Trigger: GGCTGAGCAGCTGGATTCTCAGCTGCAAGACCTTGC...GGAACGAGAGCTGACCATGAGGACTGGTTCCCAGGGCTGTAGACTAAAGTGTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117085.2 |
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| 3UTR CAA 90 bp | GAACCAGTCCTCATGGTCAGCTCTCGTTCCCACTCCTGCAAGGTCTaGCAGCTGAGAATCCAGCTGCTCAGCCTAATGGAAGGTGGAGAT | + |
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Preference number: 2 (lower is better) Translates to: EPVLMVSSRSHSCKV*QLRIQLLSLMEGGD Trigger: ATCTCCACCTTCCATTAGGCTGAGCAGCTGGATTCTCAGCTGCAAGACCTTGCAGGAGTGGGAACGAGAGCTGACCATGAGGACTGGTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117085.2 |
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| 3UTR-3UTR CCA 90 bp | TTCCCACTCCTGCAAGGTCTTGCAGCTGAGAATCCAGCTGCTCAGCCTAATGGAAGAACACACAAAGGCTaGGCCCTTCTCTGTGGTTAT | + |
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Preference number: 2 (lower is better) Translates to: FPLLQGLAAENPAAQPNGRTHKG*ALLCGY Trigger: ATAACCACAGAGAAGGGCCCAGCCTTTGTGTGTTCT...TCCATTAGGCTGAGCAGCTGGATTCTCAGCTGCAAGACCTTGCAGGAGTGGGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117085.2 |
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| 3UTR-3UTR TCA 90 bp | CGCAATCCAGTTGTACAACGATCTGAGGCTTACAGTACATTTAAGGCTTTTAAAACACCGGCACATGGATaGGAGGTGATCCTGCACCGG | + |
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Preference number: 2 (lower is better) Translates to: RNPVVQRSEAYSTFKAFKTPAHG*EVILHR Trigger: CCGGTGCAGGATCACCTCTCATCCATGTGCCGGTGT...TTTAAAAGCCTTAAATGTACTGTAAGCCTCAGATCGTTGTACAACTGGATTGCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117085.2 |
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| 3UTR-3UTR CCA 90 bp | GGCAACCAACGCAATCCAGTTGTACAACGATCTGAGGCTTACAGTACATTTAAGCTGGGCCCTTCTCTGTaGTTATTGGGTATCACTGTT | + |
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Preference number: 2 (lower is better) Translates to: GNQRNPVVQRSEAYSTFKLGPSL*LLGITV Trigger: AACAGTGATACCCAATAACCACAGAGAAGGGCCCAG...CTTAAATGTACTGTAAGCCTCAGATCGTTGTACAACTGGATTGCGTTGGTTGCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117085.2 |
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| 3UTR CAA 90 bp | CGCATCCAGGCAACAGCACACAAACTGGCAACCAACGCAATCCAGTaGTACAACGATCTGAGGCTTACAGTACATTTAAGGCTTTTAAAT | + |
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Preference number: 2 (lower is better) Translates to: RIQATAHKLATNAIQ*YNDLRLTVHLRLLN Trigger: ATTTAAAAGCCTTAAATGTACTGTAAGCCTCAGATCGTTGTACAACTGGATTGCGTTGGTTGCCAGTTTGTGTGCTGTTGCCTGGATGCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117085.2 |
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| 3UTR-3UTR CCA 90 bp | CTCACGACAGTTTCCAGTTACACTACCATAGCTTCACATATGAATCTCACCCATCAGCCTAATGGAAGGTaGAGATTACGTACAAAAGAC | + |
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Preference number: 2 (lower is better) Translates to: LTTVSSYTTIASHMNLTHQPNGR*RLRTKD Trigger: GTCTTTTGTACGTAATCTCCACCTTCCATTAGGCTG...ATGGGTGAGATTCATATGTGAAGCTATGGTAGTGTAACTGGAAACTGTCGTGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117085.2 |
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| 3UTR-3UTR CAA 90 bp | CCTGCACCGGTAGGGGAATCAGAGGTGACAGACAGCAAGGGAGACGGACTTGATCACTCCTGCAAGGTCTaGCAGCTGAGAATCCAGCTG | + |
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Preference number: 3 (lower is better) Translates to: PAPVGESEVTDSKGDGLDHSCKV*QLRIQL Trigger: CAGCTGGATTCTCAGCTGCAAGACCTTGCAGGAGTG...ATCAAGTCCGTCTCCCTTGCTGTCTGTCACCTCTGATTCCCCTACCGGTGCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117085.2 |
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| 3UTR GCA 72 bp | GAACCAGTCCTCATGGTCAGCTCTCGTTCCCACTCCTaGAAGGTCTTGCAGCTGAGAATCCAGCTGCTCAGC | + |
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Preference number: 3 (lower is better) Translates to: EPVLMVSSRSHS*KVLQLRIQLLS Trigger: GCTGAGCAGCTGGATTCTCAGCTGCAAGACCTTGCAGGAGTGGGAACGAGAGCTGACCATGAGGACTGGTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117085.2 |
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| 3UTR-3UTR CAA 90 bp | ATTCCATTACCAACCACCGTGCCGCATCCAGGCAACAGCACACAAACTGGCAACAATGATTTAAGCATCTaGTTTCTGATGTTCACCTGG | + |
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Preference number: 3 (lower is better) Translates to: IPLPTTVPHPGNSTQTGNNDLSI*FLMFTW Trigger: CCAGGTGAACATCAGAAACAAGATGCTTAAATCATT...GTTGCCAGTTTGTGTGCTGTTGCCTGGATGCGGCACGGTGGTTGGTAATGGAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117085.2 |
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| 3UTR CCA 72 bp | AGAACACACAAAGGCTGGGCCCTTCTCTGTGGTTATTaGGTATCACTGTTAAATCCAGTCAAAGCGTGTGCA | + |
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Preference number: 3 (lower is better) Translates to: RTHKGWALLCGY*VSLLNPVKACA Trigger: TGCACACGCTTTGACTGGATTTAACAGTGATACCCAATAACCACAGAGAAGGGCCCAGCCTTTGTGTGTTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117085.2 |
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| 3UTR CCA 72 bp | TTTAAGAAGAACACACAAAGGCTGGGCCCTTCTCTGTaGTTATTGGGTATCACTGTTAAATCCAGTCAAAGC | + |
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Preference number: 3 (lower is better) Translates to: FKKNTQRLGPSL*LLGITVKSSQS Trigger: GCTTTGACTGGATTTAACAGTGATACCCAATAACCACAGAGAAGGGCCCAGCCTTTGTGTGTTCTTCTTAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117085.2 |
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| 3UTR GCA 72 bp | TTATTGGGTATCACTGTTAAATCCAGTCAAAGCGTGTaGAAACAAGGATCCTCGCTTCACAGTAATGAGGTA | + |
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Preference number: 3 (lower is better) Translates to: LLGITVKSSQSV*KQGSSLHSNEV Trigger: TACCTCATTACTGTGAAGCGAGGATCCTTGTTTGCACACGCTTTGACTGGATTTAACAGTGATACCCAATAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117085.2 |
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| 3UTR CCA 72 bp | TGTAATGATTTAAGCATCTTGTTTCTGATGTTCACCTaGCACAACTCCAGTGTCAAAACCCAAATAACTCCT | + |
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Preference number: 3 (lower is better) Translates to: CNDLSILFLMFT*HNSSVKTQITP Trigger: AGGAGTTATTTGGGTTTTGACACTGGAGTTGTGCCAGGTGAACATCAGAAACAAGATGCTTAAATCATTACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117085.2 |
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| CDS-3UTR GCA 90 bp | TGCGTCCTTTATTCCATTACCAACCACCGTGCCGCATCCAGGCAACAGCACACATCACGCCATACCGGGTaGGCAGTGCCTGCCACGCGG | + |
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Preference number: 4 (lower is better) Translates to: CVLYSITNHRAASRQQHTSRHTG*AVPATR Trigger: CCGCGTGGCAGGCACTGCGCACCCGGTATGGCGTGA...TGTGTGCTGTTGCCTGGATGCGGCACGGTGGTTGGTAATGGAATAAAGGACGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117085.2 |
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| CDS-3UTR CCA 90 bp | ATTCCATTACCAACCACCGTGCCGCATCCAGGCAACAGCACACAAACTGGCAACGCAGGAAGGCCAGCTTaGCGGCGATGCGGCTCGGAC | + |
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Preference number: 4 (lower is better) Translates to: IPLPTTVPHPGNSTQTGNAGRPA*RRCGSD Trigger: GTCCGAGCCGCATCGCCGCCAAGCTGGCCTTCCTGC...GTTGCCAGTTTGTGTGCTGTTGCCTGGATGCGGCACGGTGGTTGGTAATGGAAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117085.2 |
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| CDS-3UTR GCA 90 bp | ATTCCATTACCAACCACCGTGCCGCATCCAGGCAACAGCACACAAACTGGCAACCGCAGCGCACGAACATaGAGCCCAGCCGGTTGTCGC | + |
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Preference number: 4 (lower is better) Translates to: IPLPTTVPHPGNSTQTGNRSART*SPAGCR Trigger: GCGACAACCGGCTGGGCTGCATGTTCGTGCGCTGCG...GTTGCCAGTTTGTGTGCTGTTGCCTGGATGCGGCACGGTGGTTGGTAATGGAAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117085.2 |
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| CDS-3UTR CCA 90 bp | TCACACTTTAGTCTACAGCCCTGGGAACCAGTCCTCATGGTCAGCTCTCGTTCCCCAGCACCGTGTAGGTaGGTTCGGGCGGCAGGAAGG | + |
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Preference number: 4 (lower is better) Translates to: SHFSLQPWEPVLMVSSRSPAPCR*VRAAGR Trigger: CCTTCCTGCCGCCCGAACCCACCTACACGGTGCTGG...GGAACGAGAGCTGACCATGAGGACTGGTTCCCAGGGCTGTAGACTAAAGTGTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117085.2 |
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| CDS-3UTR CCA 90 bp | CAGCCCTGGGAACCAGTCCTCATGGTCAGCTCTCGTTCCCACTCCTGCAAGGTCCAAACCAGACATCAGTaGGGAATGGAGGATGACGGC | + |
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Preference number: 4 (lower is better) Translates to: QPWEPVLMVSSRSHSCKVQTRHQ*GMEDDG Trigger: GCCGTCATCCTCCATTCCCCACTGATGTCTGGTTTG...GACCTTGCAGGAGTGGGAACGAGAGCTGACCATGAGGACTGGTTCCCAGGGCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117085.2 |
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| CDS-3UTR TCA 90 bp | CCTGCACCGGTAGGGGAATCAGAGGTGACAGACAGCAAGGGAGACGGACTTGATCATGGGAGAAATCGATaGCCTCATCCTCGGTACCGT | + |
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Preference number: 4 (lower is better) Translates to: PAPVGESEVTDSKGDGLDHGRNR*PHPRYR Trigger: ACGGTACCGAGGATGAGGTCATCGATTTCTCCCATG...ATCAAGTCCGTCTCCCTTGCTGTCTGTCACCTCTGATTCCCCTACCGGTGCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117085.2 |
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| CDS-3UTR GCA 90 bp | CCTGCACCGGTAGGGGAATCAGAGGTGACAGACAGCAAGGGAGACGGACTTGATAGCTCTATATCATTGTaGCCAGCCCCCTCAACCCAC | + |
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Preference number: 4 (lower is better) Translates to: PAPVGESEVTDSKGDGLDSSISL*PAPSTH Trigger: GTGGGTTGAGGGGGCTGGGCACAATGATATAGAGCT...ATCAAGTCCGTCTCCCTTGCTGTCTGTCACCTCTGATTCCCCTACCGGTGCAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000117085.2 |
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| CDS-3UTR GCA 90 bp | AACACACAAAGGCTGGGCCCTTCTCTGTGGTTATTGGGTATCACTGTTAAATCCGCGTCCAGTTCGCGCTaGGAGTACTGCCAGTCGGCG | + |
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Preference number: 4 (lower is better) Translates to: NTQRLGPSLWLLGITVKSASSSR*EYCQSA Trigger: CGCCGACTGGCAGTACTCGCAGCGCGAACTGGACGC...GGATTTAACAGTGATACCCAATAACCACAGAGAAGGGCCCAGCCTTTGTGTGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117085.2 |
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| CDS-3UTR CCA 90 bp | CTGTGGTTATTGGGTATCACTGTTAAATCCAGTCAAAGCGTGTGCAAACAAGGAGCAGCGTGTAGCGGCTaGAGGGCGCGCAGCGCACGA | + |
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Preference number: 4 (lower is better) Translates to: LWLLGITVKSSQSVCKQGAACSG*RARSAR Trigger: TCGTGCGCTGCGCGCCCTCCAGCCGCTACACGCTGC...TCCTTGTTTGCACACGCTTTGACTGGATTTAACAGTGATACCCAATAACCACAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117085.2 |
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| 3UTR CAA 72 bp | CTCATGGTCAGCTCTCGTTCCCACTCCTGCAAGGTCTaGCAGCTGAGAATCCAGCTGCTCAGCCTAATGGAA | + |
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Preference number: 4 (lower is better) Translates to: LMVSSRSHSCKV*QLRIQLLSLME Trigger: TTCCATTAGGCTGAGCAGCTGGATTCTCAGCTGCAAGACCTTGCAGGAGTGGGAACGAGAGCTGACCATGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117085.2 |
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| CDS-3UTR GCA 90 bp | CTCACGACAGTTTCCAGTTACACTACCATAGCTTCACATATGAATCTCACCCATCCAGCTTGGCGGCGATaGGGCTCGGACAAGGAGGGC | + |
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Preference number: 4 (lower is better) Translates to: LTTVSSYTTIASHMNLTHPAWRR*GSDKEG Trigger: GCCCTCCTTGTCCGAGCCGCATCGCCGCCAAGCTGG...ATGGGTGAGATTCATATGTGAAGCTATGGTAGTGTAACTGGAAACTGTCGTGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117085.2 |
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| CDS-3UTR TCA 90 bp | TGCGTCCTTTATTCCATTACCAACCACCGTGCCGCATCCAGGCAACAGCACACATCTGTCCATAGAGGATaGTGTTCTCAGGACTCACGC | + |
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Preference number: 4 (lower is better) Translates to: CVLYSITNHRAASRQQHTSVHRG*CSQDSR Trigger: GCGTGAGTCCTGAGAACATCATCCTCTATGGACAGA...TGTGTGCTGTTGCCTGGATGCGGCACGGTGGTTGGTAATGGAATAAAGGACGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117085.2 |
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| CDS-3UTR GCA 90 bp | ATGTACAGGACTTTTAAGAAAGCCGACAAGGAGGACTTTACAGAAGGAAAGTCGGGTTGTCGCGGGCCGTaGGCGAGAAGAAGACCTCGA | + |
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Preference number: 4 (lower is better) Translates to: MYRTFKKADKEDFTEGKSGCRGP*ARRRPR Trigger: TCGAGGTCTTCTTCTCGCGCACGGCCCGCGACAACC...CGACTTTCCTTCTGTAAAGTCCTCCTTGTCGGCTTTCTTAAAAGTCCTGTACAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117085.2 |
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| CDS-3UTR TCA 90 bp | ATGTACAGGACTTTTAAGAAAGCCGACAAGGAGGACTTTACAGAAGGAAAGTCGGTGGGGAATGGAGGATaGCGGCTGCACACTCGTACC | + |
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Preference number: 4 (lower is better) Translates to: MYRTFKKADKEDFTEGKSVGNGG*RLHTRT Trigger: GGTACGAGTGTGCAGCCGTCATCCTCCATTCCCCAC...CGACTTTCCTTCTGTAAAGTCCTCCTTGTCGGCTTTCTTAAAAGTCCTGTACAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117085.2 |
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| CDS-3UTR CCA 90 bp | TTCCCACTCCTGCAAGGTCTTGCAGCTGAGAATCCAGCTGCTCAGCCTAATGGAAGCAGTATGTTTTCCTaGTATCCGGAAAAGCAACAC | + |
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Preference number: 4 (lower is better) Translates to: FPLLQGLAAENPAAQPNGSSMFS*YPEKQH Trigger: GTGTTGCTTTTCCGGATACCAGGAAAACATACTGCT...TCCATTAGGCTGAGCAGCTGGATTCTCAGCTGCAAGACCTTGCAGGAGTGGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117085.2 |
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| CDS-3UTR TCA 90 bp | GGAAAGGCTGGCGTGTTAATACAAGTTAATGGAGGATTTCTCACGACAGTTTCCTCATCCTCGGTACCGTaGATGACCAACACAGGAGAG | + |
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Preference number: 4 (lower is better) Translates to: GKAGVLIQVNGGFLTTVSSSSVP*MTNTGE Trigger: CTCTCCTGTGTTGGTCATTCACGGTACCGAGGATGA...GGAAACTGTCGTGAGAAATCCTCCATTAACTTGTATTAACACGCCAGCCTTTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117085.2 |
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| CDS-3UTR GCA 90 bp | GGAAAGGCTGGCGTGTTAATACAAGTTAATGGAGGATTTCTCACGACAGTTTCCCCACAGTGGGGACAGTaGCAATGCTCTGTCCATAGA | + |
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Preference number: 4 (lower is better) Translates to: GKAGVLIQVNGGFLTTVSPQWGQ*QCSVHR Trigger: TCTATGGACAGAGCATTGGCACTGTCCCCACTGTGG...GGAAACTGTCGTGAGAAATCCTCCATTAACTTGTATTAACACGCCAGCCTTTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117085.2 |
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| CDS-3UTR CCA 90 bp | TGCGTCCTTTATTCCATTACCAACCACCGTGCCGCATCCAGGCAACAGCACACAATATCTTGTCAATGCTaGGGAAAGCATCAAAGCAGT | + |
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Preference number: 4 (lower is better) Translates to: CVLYSITNHRAASRQQHTISCQC*GKHQSS Trigger: ACTGCTTTGATGCTTTCCCCAGCATTGACAAGATAT...TGTGTGCTGTTGCCTGGATGCGGCACGGTGGTTGGTAATGGAATAAAGGACGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117085.2 |
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| 3UTR CAA 72 bp | AAGAACACACAAAGGCTGGGCCCTTCTCTGTGGTTATaGGGTATCACTGTTAAATCCAGTCAAAGCGTGTGC | + |
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Preference number: 4 (lower is better) Translates to: KNTQRLGPSLWL*GITVKSSQSVC Trigger: GCACACGCTTTGACTGGATTTAACAGTGATACCCAATAACCACAGAGAAGGGCCCAGCCTTTGTGTGTTCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117085.2 |
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| CDS-3UTR CCA 90 bp | CGCAATCCAGTTGTACAACGATCTGAGGCTTACAGTACATTTAAGGCTTTTAAAGACATCAGTGGGGAATaGAGGATGACGGCTGCACAC | + |
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Preference number: 4 (lower is better) Translates to: RNPVVQRSEAYSTFKAFKDISGE*RMTAAH Trigger: GTGTGCAGCCGTCATCCTCCATTCCCCACTGATGTC...TTTAAAAGCCTTAAATGTACTGTAAGCCTCAGATCGTTGTACAACTGGATTGCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117085.2 |
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| 3UTR CAA 72 bp | GCAACAGCACACAAACTGGCAACCAACGCAATCCAGTaGTACAACGATCTGAGGCTTACAGTACATTTAAGG | + |
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Preference number: 4 (lower is better) Translates to: ATAHKLATNAIQ*YNDLRLTVHLR Trigger: CCTTAAATGTACTGTAAGCCTCAGATCGTTGTACAACTGGATTGCGTTGGTTGCCAGTTTGTGTGCTGTTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117085.2 |
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| CDS-3UTR CCA 90 bp | GGATTTCTCACGACAGTTTCCAGTTACACTACCATAGCTTCACATATGAATCTCTACATCGCCAAGCCATaGGAGAAATCGATGACCTCA | + |
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Preference number: 4 (lower is better) Translates to: GFLTTVSSYTTIASHMNLYIAKP*EKSMTS Trigger: TGAGGTCATCGATTTCTCCCATGGCTTGGCGATGTA...GAGATTCATATGTGAAGCTATGGTAGTGTAACTGGAAACTGTCGTGAGAAATCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117085.2 |
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| CDS-3UTR TCA 90 bp | ATGTACAGGACTTTTAAGAAAGCCGACAAGGAGGACTTTACAGAAGGAAAGTCGGAAGCTCGTGAGATATaGACTGTTTTAGTCGTTCTA | + |
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Preference number: 4 (lower is better) Translates to: MYRTFKKADKEDFTEGKSEAREI*TVLVVL Trigger: TAGAACGACTAAAACAGTTCATATCTCACGAGCTTC...CGACTTTCCTTCTGTAAAGTCCTCCTTGTCGGCTTTCTTAAAAGTCCTGTACAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117085.2 |
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| CDS-3UTR TCA 90 bp | GGATTTCTCACGACAGTTTCCAGTTACACTACCATAGCTTCACATATGAATCTCGAGTTGGGAAGCTCGTaGGATATGAACTGTTTTAGT | + |
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Preference number: 4 (lower is better) Translates to: GFLTTVSSYTTIASHMNLELGSS*DMNCFS Trigger: ACTAAAACAGTTCATATCTCACGAGCTTCCCAACTC...GAGATTCATATGTGAAGCTATGGTAGTGTAACTGGAAACTGTCGTGAGAAATCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117085.2 |
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| CDS GCA 90 bp | AGAAGAGCAGCGTGTAGCGGCTGGAGGGCGCGCAGCGCACGAACATaGAGCCCAGCCGGTTGTCGCGGGCCGTGCGCGAGAAGAAGACCT | + |
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Preference number: 5 (lower is better) Translates to: RRAACSGWRARSART*SPAGCRGPCARRRP Trigger: AGGTCTTCTTCTCGCGCACGGCCCGCGACAACCGGCTGGGCTGCATGTTCGTGCGCTGCGCGCCCTCCAGCCGCTACACGCTGCTCTTCT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117085.2 |
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| CDS TCA 90 bp | CCAGGTCCACAGTGGGGACAGTGCCAATGCTCTGTCCATAGAGGATaGTGTTCTCAGGACTCACGCCATACCGGGTGCGCAGTGCCTGCC | + |
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Preference number: 5 (lower is better) Translates to: PGPQWGQCQCSVHRG*CSQDSRHTGCAVPA Trigger: GGCAGGCACTGCGCACCCGGTATGGCGTGAGTCCTGAGAACATCATCCTCTATGGACAGAGCATTGGCACTGTCCCCACTGTGGACCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117085.2 |
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| CDS-3UTR CAA 90 bp | GGAAAGGCTGGCGTGTTAATACAAGTTAATGGAGGATTTCTCACGACAGTTTCCATGCAGCCCAGCCGGTaGTCGCGGGCCGTGCGCGAG | + |
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Preference number: 5 (lower is better) Translates to: GKAGVLIQVNGGFLTTVSMQPSR*SRAVRE Trigger: CTCGCGCACGGCCCGCGACAACCGGCTGGGCTGCAT...GGAAACTGTCGTGAGAAATCCTCCATTAACTTGTATTAACACGCCAGCCTTTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117085.2 |
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| CDS TCA 90 bp | ATCGCCAAGCCATGGGAGAAATCGATGACCTCATCCTCGGTACCGTaGATGACCAACACAGGAGAGGTGACTTTAGATATCTTGTCAATG | + |
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Preference number: 5 (lower is better) Translates to: IAKPWEKSMTSSSVP*MTNTGEVTLDILSM Trigger: CATTGACAAGATATCTAAAGTCACCTCTCCTGTGTTGGTCATTCACGGTACCGAGGATGAGGTCATCGATTTCTCCCATGGCTTGGCGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117085.2 |
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| CDS GCA 72 bp | GCGTGTAGCGGCTGGAGGGCGCGCAGCGCACGAACATaGAGCCCAGCCGGTTGTCGCGGGCCGTGCGCGAGA | + |
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Preference number: 6 (lower is better) Translates to: ACSGWRARSART*SPAGCRGPCAR Trigger: TCTCGCGCACGGCCCGCGACAACCGGCTGGGCTGCATGTTCGTGCGCTGCGCGCCCTCCAGCCGCTACACGC 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117085.2 |
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| CDS CAA 72 bp | GAGGGCGCGCAGCGCACGAACATGCAGCCCAGCCGGTaGTCGCGGGCCGTGCGCGAGAAGAAGACCTCGACG | + |
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Preference number: 6 (lower is better) Translates to: EGAQRTNMQPSR*SRAVREKKTST Trigger: CGTCGAGGTCTTCTTCTCGCGCACGGCCCGCGACAACCGGCTGGGCTGCATGTTCGTGCGCTGCGCGCCCTC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117085.2 |
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| CDS CCA 72 bp | GGTATCCGGAAAAGCAACACGCAAACCAGACATCAGTaGGGAATGGAGGATGACGGCTGCACACTCGTACCG | + |
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Preference number: 6 (lower is better) Translates to: GIRKSNTQTRHQ*GMEDDGCTLVP Trigger: CGGTACGAGTGTGCAGCCGTCATCCTCCATTCCCCACTGATGTCTGGTTTGCGTGTTGCTTTTCCGGATACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117085.2 |
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| CDS TCA 72 bp | CCATGGGAGAAATCGATGACCTCATCCTCGGTACCGTaGATGACCAACACAGGAGAGGTGACTTTAGATATC | + |
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Preference number: 6 (lower is better) Translates to: PWEKSMTSSSVP*MTNTGEVTLDI Trigger: GATATCTAAAGTCACCTCTCCTGTGTTGGTCATTCACGGTACCGAGGATGAGGTCATCGATTTCTCCCATGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117085.2 |
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