Pregenerated sensors for ABHD17B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000047368Ensembl transcript IDs: ENSMUST00000052556.5, ENSMUST00000235332.2
Found 51 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CAGCAGAGGTGGAAAGGAACCAAACAGCCAGTCTCTCTGTGGTCTTaGAGATCAACTAACGGAGTTTCAAGTATTCATATAAGGAAGACT | + |
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Preference number: 1 (lower is better) Translates to: QQRWKGTKQPVSLWS*RSTNGVSSIHIRKT Trigger: AGTCTTCCTTATATGAATACTTGAAACTCCGTTAGTTGATCTTCAAGACCACAGAGAGACTGGCTGTTTGGTTCCTTTCCACCTCTGCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052556.5 ENSMUST00000235332.2 |
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| 3UTR TCA 90 bp | GAACTAGTTAAAATCCAGCGCCATCAGGACTTCTCAGTGACAGGATaGAGAGCTGCTAAGTTAACAGATGGCATAAAAATTAAGACTTCA | + |
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Preference number: 1 (lower is better) Translates to: ELVKIQRHQDFSVTG*RAAKLTDGIKIKTS Trigger: TGAAGTCTTAATTTTTATGCCATCTGTTAACTTAGCAGCTCTTCATCCTGTCACTGAGAAGTCCTGATGGCGCTGGATTTTAACTAGTTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000052556.5 ENSMUST00000235332.2 |
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| 3UTR-3UTR GCA 90 bp | GAACAGGCCCTACTCTTAAAAACAGCAGAGGTGGAAAGGAACCAAACAGCCAGTCACGTCATTGTGTCCTaGCCCTTCAACCCACAGGGG | + |
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Preference number: 2 (lower is better) Translates to: EQALLLKTAEVERNQTASHVIVS*PFNPQG Trigger: CCCCTGTGGGTTGAAGGGGCAGGACACAATGACGTG...ACTGGCTGTTTGGTTCCTTTCCACCTCTGCTGTTTTTAAGAGTAGGGCCTGTTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000235332.2 |
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| 3UTR-3UTR GCA 90 bp | GAACAGGCCCTACTCTTAAAAACAGCAGAGGTGGAAAGGAACCAAACAGCCAGTGCAGCGCTCAAACAATaGGAGGCCATGGGAAAAGTC | + |
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Preference number: 2 (lower is better) Translates to: EQALLLKTAEVERNQTASAALKQ*EAMGKV Trigger: GACTTTTCCCATGGCCTCGCATTGTTTGAGCGCTGC...ACTGGCTGTTTGGTTCCTTTCCACCTCTGCTGTTTTTAAGAGTAGGGCCTGTTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000235332.2 |
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| 3UTR-3UTR CCA 90 bp | AAAGAACAGGCCCTACTCTTAAAAACAGCAGAGGTGGAAAGGAACCAAACAGCCGGCTCCACAGGTCTTTaGCAGCGCTCAAACAATGCG | + |
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Preference number: 2 (lower is better) Translates to: KEQALLLKTAEVERNQTAGSTGL*QRSNNA Trigger: CGCATTGTTTGAGCGCTGCCAAAGACCTGTGGAGCC...GGCTGTTTGGTTCCTTTCCACCTCTGCTGTTTTTAAGAGTAGGGCCTGTTCTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000235332.2 |
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| 3UTR-3UTR TCA 90 bp | AGGAGGGAACCCATGACATTCTCAGATACTACTCCAAAAGAACAGGCCCTACTCATCAGGACTTCTCAGTaGCAGGATGAAGAGCTGCTA | + |
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Preference number: 2 (lower is better) Translates to: RREPMTFSDTTPKEQALLIRTSQ*QDEELL Trigger: TAGCAGCTCTTCATCCTGTCACTGAGAAGTCCTGAT...GAGTAGGGCCTGTTCTTTTGGAGTAGTATCTGAGAATGTCATGGGTTCCCTCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052556.5 ENSMUST00000235332.2 |
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| 3UTR-3UTR TCA 90 bp | GAACAGGCCCTACTCTTAAAAACAGCAGAGGTGGAAAGGAACCAAACAGCCAGTTCAGGAGGGAACCCATaGCATTCTCAGATACTACTC | + |
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Preference number: 2 (lower is better) Translates to: EQALLLKTAEVERNQTASSGGNP*HSQILL Trigger: GAGTAGTATCTGAGAATGTCATGGGTTCCCTCCTGA...ACTGGCTGTTTGGTTCCTTTCCACCTCTGCTGTTTTTAAGAGTAGGGCCTGTTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000052556.5 ENSMUST00000235332.2 |
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| 3UTR-3UTR TCA 90 bp | CCAAAAGAACAGGCCCTACTCTTAAAAACAGCAGAGGTGGAAAGGAACCAAACATCAGGAGGGAACCCATaGCATTCTCAGATACTACTC | + |
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Preference number: 2 (lower is better) Translates to: PKEQALLLKTAEVERNQTSGGNP*HSQILL Trigger: GAGTAGTATCTGAGAATGTCATGGGTTCCCTCCTGA...TGTTTGGTTCCTTTCCACCTCTGCTGTTTTTAAGAGTAGGGCCTGTTCTTTTGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000052556.5 ENSMUST00000235332.2 |
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| 3UTR-3UTR CCA 90 bp | GAACAGGCCCTACTCTTAAAAACAGCAGAGGTGGAAAGGAACCAAACAGCCAGTAACAATGCGAGGCCATaGGAAAAGTCAATGACTTCA | + |
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Preference number: 2 (lower is better) Translates to: EQALLLKTAEVERNQTASNNARP*EKSMTS Trigger: TGAAGTCATTGACTTTTCCCATGGCCTCGCATTGTT...ACTGGCTGTTTGGTTCCTTTCCACCTCTGCTGTTTTTAAGAGTAGGGCCTGTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000235332.2 |
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| 3UTR-3UTR TCA 90 bp | AAAGAACAGGCCCTACTCTTAAAAACAGCAGAGGTGGAAAGGAACCAAACAGCCTTCTCAGTGACAGGATaGAGAGCTGCTAAGTTAACA | + |
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Preference number: 2 (lower is better) Translates to: KEQALLLKTAEVERNQTAFSVTG*RAAKLT Trigger: TGTTAACTTAGCAGCTCTTCATCCTGTCACTGAGAA...GGCTGTTTGGTTCCTTTCCACCTCTGCTGTTTTTAAGAGTAGGGCCTGTTCTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000052556.5 ENSMUST00000235332.2 |
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| 3UTR-3UTR TCA 90 bp | CCAAAAGAACAGGCCCTACTCTTAAAAACAGCAGAGGTGGAAAGGAACCAAACAGTCTCTCTGTGGTCTTaGAGATCAACTAACGGAGTT | + |
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Preference number: 2 (lower is better) Translates to: PKEQALLLKTAEVERNQTVSLWS*RSTNGV Trigger: AACTCCGTTAGTTGATCTTCAAGACCACAGAGAGAC...TGTTTGGTTCCTTTCCACCTCTGCTGTTTTTAAGAGTAGGGCCTGTTCTTTTGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000052556.5 ENSMUST00000235332.2 |
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| 3UTR-3UTR TCA 90 bp | TCCAAAAGAACAGGCCCTACTCTTAAAAACAGCAGAGGTGGAAAGGAACCAAACGTCTCTCTGTGGTCTTaGAGATCAACTAACGGAGTT | + |
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Preference number: 2 (lower is better) Translates to: SKRTGPTLKNSRGGKEPNVSLWS*RSTNGV Trigger: AACTCCGTTAGTTGATCTTCAAGACCACAGAGAGAC...GTTTGGTTCCTTTCCACCTCTGCTGTTTTTAAGAGTAGGGCCTGTTCTTTTGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000052556.5 ENSMUST00000235332.2 |
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| 3UTR-3UTR GCA 90 bp | AGGAGGGAACCCATGACATTCTCAGATACTACTCCAAAAGAACAGGCCCTACTCATTACACAGCCTGACTaGATGATACTGCTATTTCCA | + |
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Preference number: 2 (lower is better) Translates to: RREPMTFSDTTPKEQALLITQPD*MILLFP Trigger: TGGAAATAGCAGTATCATGCAGTCAGGCTGTGTAAT...GAGTAGGGCCTGTTCTTTTGGAGTAGTATCTGAGAATGTCATGGGTTCCCTCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052556.5 ENSMUST00000235332.2 |
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| 3UTR-3UTR TCA 90 bp | CCAAAAGAACAGGCCCTACTCTTAAAAACAGCAGAGGTGGAAAGGAACCAAACATTCTCAGTGACAGGATaGAGAGCTGCTAAGTTAACA | + |
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Preference number: 2 (lower is better) Translates to: PKEQALLLKTAEVERNQTFSVTG*RAAKLT Trigger: TGTTAACTTAGCAGCTCTTCATCCTGTCACTGAGAA...TGTTTGGTTCCTTTCCACCTCTGCTGTTTTTAAGAGTAGGGCCTGTTCTTTTGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000052556.5 ENSMUST00000235332.2 |
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| 3UTR-3UTR TCA 90 bp | AAAAGAACAGGCCCTACTCTTAAAAACAGCAGAGGTGGAAAGGAACCAAACAGCTCATCTTCAGTCCCGTaGATTATTAATACTGGAGAG | + |
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Preference number: 2 (lower is better) Translates to: KRTGPTLKNSRGGKEPNSSSSVP*IINTGE Trigger: CTCTCCAGTATTAATAATTCACGGGACTGAAGATGA...GCTGTTTGGTTCCTTTCCACCTCTGCTGTTTTTAAGAGTAGGGCCTGTTCTTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000235332.2 |
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| 3UTR-3UTR GCA 90 bp | TCCAAAAGAACAGGCCCTACTCTTAAAAACAGCAGAGGTGGAAAGGAACCAAACATTACACAGCCTGACTaGATGATACTGCTATTTCCA | + |
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Preference number: 2 (lower is better) Translates to: SKRTGPTLKNSRGGKEPNITQPD*MILLFP Trigger: TGGAAATAGCAGTATCATGCAGTCAGGCTGTGTAAT...GTTTGGTTCCTTTCCACCTCTGCTGTTTTTAAGAGTAGGGCCTGTTCTTTTGGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000052556.5 ENSMUST00000235332.2 |
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| 3UTR-3UTR TCA 90 bp | AAAAGAACAGGCCCTACTCTTAAAAACAGCAGAGGTGGAAAGGAACCAAACAGCATAAATTACACAGCCTaGCTGCATGATACTGCTATT | + |
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Preference number: 2 (lower is better) Translates to: KRTGPTLKNSRGGKEPNSINYTA*LHDTAI Trigger: AATAGCAGTATCATGCAGTCAGGCTGTGTAATTTAT...GCTGTTTGGTTCCTTTCCACCTCTGCTGTTTTTAAGAGTAGGGCCTGTTCTTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000052556.5 ENSMUST00000235332.2 |
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| 3UTR-3UTR TCA 90 bp | TCCAAAAGAACAGGCCCTACTCTTAAAAACAGCAGAGGTGGAAAGGAACCAAACATAAATTACACAGCCTaGCTGCATGATACTGCTATT | + |
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Preference number: 2 (lower is better) Translates to: SKRTGPTLKNSRGGKEPNINYTA*LHDTAI Trigger: AATAGCAGTATCATGCAGTCAGGCTGTGTAATTTAT...GTTTGGTTCCTTTCCACCTCTGCTGTTTTTAAGAGTAGGGCCTGTTCTTTTGGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000052556.5 ENSMUST00000235332.2 |
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| 3UTR-3UTR GCA 90 bp | AAAGAACAGGCCCTACTCTTAAAAACAGCAGAGGTGGAAAGGAACCAAACAGCCTTATTTACCAAGGAGTaGAGTTCAGCAAGAAAAGAA | + |
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Preference number: 2 (lower is better) Translates to: KEQALLLKTAEVERNQTALFTKE*SSARKE Trigger: TTCTTTTCTTGCTGAACTGCACTCCTTGGTAAATAA...GGCTGTTTGGTTCCTTTCCACCTCTGCTGTTTTTAAGAGTAGGGCCTGTTCTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000052556.5 ENSMUST00000235332.2 |
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| 3UTR-3UTR CAA 90 bp | GAACAGGCCCTACTCTTAAAAACAGCAGAGGTGGAAAGGAACCAAACAGCCAGTGGGCTCCACAGGTCTTaGGCAGCGCTCAAACAATGC | + |
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Preference number: 3 (lower is better) Translates to: EQALLLKTAEVERNQTASGLHRS*AALKQC Trigger: GCATTGTTTGAGCGCTGCCAAAGACCTGTGGAGCCC...ACTGGCTGTTTGGTTCCTTTCCACCTCTGCTGTTTTTAAGAGTAGGGCCTGTTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000235332.2 |
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| 3UTR TCA 72 bp | AAAATCCAGCGCCATCAGGACTTCTCAGTGACAGGATaGAGAGCTGCTAAGTTAACAGATGGCATAAAAATT | + |
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Preference number: 3 (lower is better) Translates to: KIQRHQDFSVTG*RAAKLTDGIKI Trigger: AATTTTTATGCCATCTGTTAACTTAGCAGCTCTTCATCCTGTCACTGAGAAGTCCTGATGGCGCTGGATTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000052556.5 ENSMUST00000235332.2 |
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| 3UTR TCA 72 bp | TGGAAAGGAACCAAACAGCCAGTCTCTCTGTGGTCTTaGAGATCAACTAACGGAGTTTCAAGTATTCATATA | + |
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Preference number: 3 (lower is better) Translates to: WKGTKQPVSLWS*RSTNGVSSIHI Trigger: TATATGAATACTTGAAACTCCGTTAGTTGATCTTCAAGACCACAGAGAGACTGGCTGTTTGGTTCCTTTCCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052556.5 ENSMUST00000235332.2 |
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| 3UTR TCA 72 bp | CCATGGGAAAAGTCAATGACTTCATCTTCAGTCCCGTaGATTATTAATACTGGAGAGGTTATCTTAGAGATT | + |
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Preference number: 3 (lower is better) Translates to: PWEKSMTSSSVP*IINTGEVILEI Trigger: AATCTCTAAGATAACCTCTCCAGTATTAATAATTCACGGGACTGAAGATGAAGTCATTGACTTTTCCCATGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235332.2 |
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| CDS-3UTR CCA 90 bp | GAACAGGCCCTACTCTTAAAAACAGCAGAGGTGGAAAGGAACCAAACAGCCAGTAGCCAGGTCCACAGATaGCACTGTCCCTATGCTCTG | + |
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Preference number: 4 (lower is better) Translates to: EQALLLKTAEVERNQTASSQVHR*HCPYAL Trigger: CAGAGCATAGGGACAGTGCCATCTGTGGACCTGGCT...ACTGGCTGTTTGGTTCCTTTCCACCTCTGCTGTTTTTAAGAGTAGGGCCTGTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052556.5 |
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| CDS-3UTR GCA 90 bp | CCAAAAGAACAGGCCCTACTCTTAAAAACAGCAGAGGTGGAAAGGAACCAAACACACGTCATTGTGTCCTaGCCCTTCAACCCACAGGGG | + |
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Preference number: 4 (lower is better) Translates to: PKEQALLLKTAEVERNQTHVIVS*PFNPQG Trigger: CCCCTGTGGGTTGAAGGGGCAGGACACAATGACGTG...TGTTTGGTTCCTTTCCACCTCTGCTGTTTTTAAGAGTAGGGCCTGTTCTTTTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052556.5 |
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| CDS-3UTR CCA 90 bp | AAAGAACAGGCCCTACTCTTAAAAACAGCAGAGGTGGAAAGGAACCAAACAGCCTTTCCCTGGGCAAGGTaGACAGCAGAAGAGGCAACA | + |
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Preference number: 4 (lower is better) Translates to: KEQALLLKTAEVERNQTAFPWAR*TAEEAT Trigger: TGTTGCCTCTTCTGCTGTCCACCTTGCCCAGGGAAA...GGCTGTTTGGTTCCTTTCCACCTCTGCTGTTTTTAAGAGTAGGGCCTGTTCTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000052556.5 ENSMUST00000235332.2 |
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| CDS-3UTR GCA 90 bp | AAAAGAACAGGCCCTACTCTTAAAAACAGCAGAGGTGGAAAGGAACCAAACAGCGCAGCGCTCAAACAATaGGAGGCCATGGGAAAAGTC | + |
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Preference number: 4 (lower is better) Translates to: KRTGPTLKNSRGGKEPNSAALKQ*EAMGKV Trigger: GACTTTTCCCATGGCCTCGCATTGTTTGAGCGCTGC...GCTGTTTGGTTCCTTTCCACCTCTGCTGTTTTTAAGAGTAGGGCCTGTTCTTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000052556.5 |
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| CDS-3UTR CCA 90 bp | TCCAAAAGAACAGGCCCTACTCTTAAAAACAGCAGAGGTGGAAAGGAACCAAACTTTCCCTGGGCAAGGTaGACAGCAGAAGAGGCAACA | + |
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Preference number: 4 (lower is better) Translates to: SKRTGPTLKNSRGGKEPNFPWAR*TAEEAT Trigger: TGTTGCCTCTTCTGCTGTCCACCTTGCCCAGGGAAA...GTTTGGTTCCTTTCCACCTCTGCTGTTTTTAAGAGTAGGGCCTGTTCTTTTGGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000052556.5 ENSMUST00000235332.2 |
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| CDS-3UTR TCA 90 bp | AAAAGAACAGGCCCTACTCTTAAAAACAGCAGAGGTGGAAAGGAACCAAACAGCAGCAACTCGCATTCCTaGGGTGAGAGGAGAATGAAG | + |
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Preference number: 4 (lower is better) Translates to: KRTGPTLKNSRGGKEPNSSNSHS*GERRMK Trigger: CTTCATTCTCCTCTCACCTCAGGAATGCGAGTTGCT...GCTGTTTGGTTCCTTTCCACCTCTGCTGTTTTTAAGAGTAGGGCCTGTTCTTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052556.5 |
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| CDS-3UTR CCA 90 bp | AGGAGGGAACCCATGACATTCTCAGATACTACTCCAAAAGAACAGGCCCTACTCCATCAGTGTGTAAGTTaGATCAGGTGGCAAGAATGC | + |
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Preference number: 4 (lower is better) Translates to: RREPMTFSDTTPKEQALLHQCVS*IRWQEC Trigger: GCATTCTTGCCACCTGATCCAACTTACACACTGATG...GAGTAGGGCCTGTTCTTTTGGAGTAGTATCTGAGAATGTCATGGGTTCCCTCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052556.5 ENSMUST00000235332.2 |
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| CDS-3UTR GCA 90 bp | AAAAGAACAGGCCCTACTCTTAAAAACAGCAGAGGTGGAAAGGAACCAAACAGCGGCAGCTTCCACATCTaGATACAGGTTCTTCTCTGT | + |
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Preference number: 4 (lower is better) Translates to: KRTGPTLKNSRGGKEPNSGSFHI*IQVLLC Trigger: ACAGAGAAGAACCTGTATGCAGATGTGGAAGCTGCC...GCTGTTTGGTTCCTTTCCACCTCTGCTGTTTTTAAGAGTAGGGCCTGTTCTTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000052556.5 ENSMUST00000235332.2 |
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| CDS-3UTR GCA 90 bp | CCAAAAGAACAGGCCCTACTCTTAAAAACAGCAGAGGTGGAAAGGAACCAAACAGGCAGCTTCCACATCTaGATACAGGTTCTTCTCTGT | + |
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Preference number: 4 (lower is better) Translates to: PKEQALLLKTAEVERNQTGSFHI*IQVLLC Trigger: ACAGAGAAGAACCTGTATGCAGATGTGGAAGCTGCC...TGTTTGGTTCCTTTCCACCTCTGCTGTTTTTAAGAGTAGGGCCTGTTCTTTTGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000052556.5 ENSMUST00000235332.2 |
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| CDS-3UTR TCA 90 bp | GAACAGGCCCTACTCTTAAAAACAGCAGAGGTGGAAAGGAACCAAACAGCCAGTTCATCTTCAGTCCCGTaGATTATTAATACTGGAGAG | + |
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Preference number: 4 (lower is better) Translates to: EQALLLKTAEVERNQTASSSSVP*IINTGE Trigger: CTCTCCAGTATTAATAATTCACGGGACTGAAGATGA...ACTGGCTGTTTGGTTCCTTTCCACCTCTGCTGTTTTTAAGAGTAGGGCCTGTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052556.5 |
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| CDS-3UTR GCA 90 bp | AAAAGAACAGGCCCTACTCTTAAAAACAGCAGAGGTGGAAAGGAACCAAACAGCCATTTTCAGGACGAATaGCGTATCTTGTCCGAAGAG | + |
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Preference number: 4 (lower is better) Translates to: KRTGPTLKNSRGGKEPNSHFQDE*RILSEE Trigger: CTCTTCGGACAAGATACGGCATTCGTCCTGAAAATG...GCTGTTTGGTTCCTTTCCACCTCTGCTGTTTTTAAGAGTAGGGCCTGTTCTTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000052556.5 |
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| CDS-3UTR CCA 90 bp | AAAGAACAGGCCCTACTCTTAAAAACAGCAGAGGTGGAAAGGAACCAAACAGCCAACAATGCGAGGCCATaGGAAAAGTCAATGACTTCA | + |
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Preference number: 4 (lower is better) Translates to: KEQALLLKTAEVERNQTANNARP*EKSMTS Trigger: TGAAGTCATTGACTTTTCCCATGGCCTCGCATTGTT...GGCTGTTTGGTTCCTTTCCACCTCTGCTGTTTTTAAGAGTAGGGCCTGTTCTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052556.5 |
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| CDS-3UTR GCA 90 bp | AGGAGGGAACCCATGACATTCTCAGATACTACTCCAAAAGAACAGGCCCTACTCTACAAGCAATTCTGTTaGCTTTACTGGTTCTTGTCA | + |
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Preference number: 4 (lower is better) Translates to: RREPMTFSDTTPKEQALLYKQFC*LYWFLS Trigger: TGACAAGAACCAGTAAAGGCAACAGAATTGCTTGTA...GAGTAGGGCCTGTTCTTTTGGAGTAGTATCTGAGAATGTCATGGGTTCCCTCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052556.5 ENSMUST00000235332.2 |
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| CDS-3UTR GCA 90 bp | AGGAGGGAACCCATGACATTCTCAGATACTACTCCAAAAGAACAGGCCCTACTCGACCTATATAAAAACTaGTCATCTGACCAAGATCAA | + |
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Preference number: 4 (lower is better) Translates to: RREPMTFSDTTPKEQALLDLYKN*SSDQDQ Trigger: TTGATCTTGGTCAGATGAGCAGTTTTTATATAGGTC...GAGTAGGGCCTGTTCTTTTGGAGTAGTATCTGAGAATGTCATGGGTTCCCTCCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000052556.5 ENSMUST00000235332.2 |
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| CDS-3UTR CCA 90 bp | TCCAAAAGAACAGGCCCTACTCTTAAAAACAGCAGAGGTGGAAAGGAACCAAACACTGTCCCTATGCTCTaGCCATATATAATCACATTT | + |
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Preference number: 4 (lower is better) Translates to: SKRTGPTLKNSRGGKEPNTVPML*PYIITF Trigger: AAATGTGATTATATATGGCCAGAGCATAGGGACAGT...GTTTGGTTCCTTTCCACCTCTGCTGTTTTTAAGAGTAGGGCCTGTTCTTTTGGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052556.5 |
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| CDS-3UTR GCA 90 bp | CCAAAAGAACAGGCCCTACTCTTAAAAACAGCAGAGGTGGAAAGGAACCAAACAGACCTATATAAAAACTaGTCATCTGACCAAGATCAA | + |
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Preference number: 4 (lower is better) Translates to: PKEQALLLKTAEVERNQTDLYKN*SSDQDQ Trigger: TTGATCTTGGTCAGATGAGCAGTTTTTATATAGGTC...TGTTTGGTTCCTTTCCACCTCTGCTGTTTTTAAGAGTAGGGCCTGTTCTTTTGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000052556.5 ENSMUST00000235332.2 |
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| CDS-3UTR CAA 90 bp | AGGAGGGAACCCATGACATTCTCAGATACTACTCCAAAAGAACAGGCCCTACTCGGGCTCCACAGGTCTTaGGCAGCGCTCAAACAATGC | + |
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Preference number: 5 (lower is better) Translates to: RREPMTFSDTTPKEQALLGLHRS*AALKQC Trigger: GCATTGTTTGAGCGCTGCCAAAGACCTGTGGAGCCC...GAGTAGGGCCTGTTCTTTTGGAGTAGTATCTGAGAATGTCATGGGTTCCCTCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052556.5 |
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| CDS GCA 90 bp | CTTGTCATGAAACACTCAATAGCATCTTTTTCTCGGGACGAGTACTaGCAGTCTGCTCGCTCTGACAGGTGTAAGGTCCAGCGGCTTCCA | + |
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Preference number: 5 (lower is better) Translates to: LVMKHSIASFSRDEY*QSARSDRCKVQRLP Trigger: TGGAAGCCGCTGGACCTTACACCTGTCAGAGCGAGCAGACTGGCAGTACTCGTCCCGAGAAAAAGATGCTATTGAGTGTTTCATGACAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000052556.5 ENSMUST00000235332.2 |
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| CDS GCA 90 bp | ACTCGCATTCCTTGTCCGAAGAGCCAGCCAGGCAGCTTCCACATCTaGATACAGGTTCTTCTCTGTTGGCTTTCCAGAACTAGCACCATA | + |
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Preference number: 5 (lower is better) Translates to: TRIPCPKSQPGSFHI*IQVLLCWLSRTSTI Trigger: TATGGTGCTAGTTCTGGAAAGCCAACAGAGAAGAACCTGTATGCAGATGTGGAAGCTGCCTGGCTGGCTCTTCGGACAAGGAATGCGAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235332.2 |
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| CDS GCA 90 bp | AATGCCGTATCTTGTCCGAAGAGCCAGCCAGGCAGCTTCCACATCTaGATACAGGTTCTTCTCTGTTGGCTTTCCAGAACTAGCACCATA | + |
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Preference number: 5 (lower is better) Translates to: NAVSCPKSQPGSFHI*IQVLLCWLSRTSTI Trigger: TATGGTGCTAGTTCTGGAAAGCCAACAGAGAAGAACCTGTATGCAGATGTGGAAGCTGCCTGGCTGGCTCTTCGGACAAGATACGGCATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052556.5 |
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| CDS-3UTR CAA 90 bp | AAAGAACAGGCCCTACTCTTAAAAACAGCAGAGGTGGAAAGGAACCAAACAGCCGCAAGAATGCTAGTTTaGAAGCAATTTTCCCTGGGC | + |
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Preference number: 5 (lower is better) Translates to: KEQALLLKTAEVERNQTAARMLV*KQFSLG Trigger: GCCCAGGGAAAATTGCTTCAAAACTAGCATTCTTGC...GGCTGTTTGGTTCCTTTCCACCTCTGCTGTTTTTAAGAGTAGGGCCTGTTCTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000052556.5 ENSMUST00000235332.2 |
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| CDS-3UTR CAA 90 bp | AAAGAACAGGCCCTACTCTTAAAAACAGCAGAGGTGGAAAGGAACCAAACAGCCACATCAGTGTGTAAGTaGGATCAGGTGGCAAGAATG | + |
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Preference number: 5 (lower is better) Translates to: KEQALLLKTAEVERNQTATSVCK*DQVARM Trigger: CATTCTTGCCACCTGATCCAACTTACACACTGATGT...GGCTGTTTGGTTCCTTTCCACCTCTGCTGTTTTTAAGAGTAGGGCCTGTTCTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000052556.5 ENSMUST00000235332.2 |
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| CDS-3UTR CAA 90 bp | TCCAAAAGAACAGGCCCTACTCTTAAAAACAGCAGAGGTGGAAAGGAACCAAACGCAAGAATGCTAGTTTaGAAGCAATTTTCCCTGGGC | + |
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Preference number: 5 (lower is better) Translates to: SKRTGPTLKNSRGGKEPNARMLV*KQFSLG Trigger: GCCCAGGGAAAATTGCTTCAAAACTAGCATTCTTGC...GTTTGGTTCCTTTCCACCTCTGCTGTTTTTAAGAGTAGGGCCTGTTCTTTTGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000052556.5 ENSMUST00000235332.2 |
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| CDS-3UTR CAA 90 bp | AAAAGAACAGGCCCTACTCTTAAAAACAGCAGAGGTGGAAAGGAACCAAACAGCACATCAGTGTGTAAGTaGGATCAGGTGGCAAGAATG | + |
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Preference number: 5 (lower is better) Translates to: KRTGPTLKNSRGGKEPNSTSVCK*DQVARM Trigger: CATTCTTGCCACCTGATCCAACTTACACACTGATGT...GCTGTTTGGTTCCTTTCCACCTCTGCTGTTTTTAAGAGTAGGGCCTGTTCTTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000052556.5 ENSMUST00000235332.2 |
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| CDS-3UTR CAA 90 bp | AAAAGAACAGGCCCTACTCTTAAAAACAGCAGAGGTGGAAAGGAACCAAACAGCATACAAGCAATTCTGTaGCCTTTACTGGTTCTTGTC | + |
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Preference number: 5 (lower is better) Translates to: KRTGPTLKNSRGGKEPNSIQAIL*PLLVLV Trigger: GACAAGAACCAGTAAAGGCAACAGAATTGCTTGTAT...GCTGTTTGGTTCCTTTCCACCTCTGCTGTTTTTAAGAGTAGGGCCTGTTCTTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000052556.5 ENSMUST00000235332.2 |
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| CDS GCA 72 bp | AAACACTCAATAGCATCTTTTTCTCGGGACGAGTACTaGCAGTCTGCTCGCTCTGACAGGTGTAAGGTCCAG | + |
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Preference number: 6 (lower is better) Translates to: KHSIASFSRDEY*QSARSDRCKVQ Trigger: CTGGACCTTACACCTGTCAGAGCGAGCAGACTGGCAGTACTCGTCCCGAGAAAAAGATGCTATTGAGTGTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000052556.5 ENSMUST00000235332.2 |
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| CDS CAA 72 bp | GTGTGTAAGTTGGATCAGGTGGCAAGAATGCTAGTTTaGAAGCAATTTTCCCTGGGCAAGGTGGACAGCAGA | + |
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Preference number: 6 (lower is better) Translates to: VCKLDQVARMLV*KQFSLGKVDSR Trigger: TCTGCTGTCCACCTTGCCCAGGGAAAATTGCTTCAAAACTAGCATTCTTGCCACCTGATCCAACTTACACAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052556.5 ENSMUST00000235332.2 |
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| CDS CAA 72 bp | AGCGGCTTCCACTTTCATCACACATCAGTGTGTAAGTaGGATCAGGTGGCAAGAATGCTAGTTTTGAAGCAA | + |
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Preference number: 6 (lower is better) Translates to: SGFHFHHTSVCK*DQVARMLVLKQ Trigger: TTGCTTCAAAACTAGCATTCTTGCCACCTGATCCAACTTACACACTGATGTGTGATGAAAGTGGAAGCCGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052556.5 ENSMUST00000235332.2 |
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