Pregenerated sensors for ABHD17A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000003346Ensembl transcript IDs: ENSMUST00000003436.12, ENSMUST00000189605.2, ENSMUST00000191440.7
Found 15 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GAAGAGGGACCTCTGACGCCTGAACATGGCTCATGGCCCCTGGGGTaGCAGGCAGGGTCCTGGGCTCCGGGTCACATGCAGTCCCGGCAG | + |
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Preference number: 1 (lower is better) Translates to: EEGPLTPEHGSWPLG*QAGSWAPGHMQSRQ Trigger: CTGCCGGGACTGCATGTGACCCGGAGCCCAGGACCCTGCCTGGCACCCCAGGGGCCATGAGCCATGTTCAGGCGTCAGAGGTCCCTCTTC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000003436.12 ENSMUST00000189605.2 ENSMUST00000191440.7 |
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| 3UTR-3UTR GCA 90 bp | CTCTTTGCTTCCATGAGGAGAGAAGAGGGACCTCTGACGCCTGAACATGGCTCACCCCACCCTTTCTCATaGCCCGCCCTTTCCCAGGCT | + |
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Preference number: 2 (lower is better) Translates to: LFASMRREEGPLTPEHGSPHPFS*PALSQA Trigger: AGCCTGGGAAAGGGCGGGGCATGAGAAAGGGTGGGG...TGAGCCATGTTCAGGCGTCAGAGGTCCCTCTTCTCTCCTCATGGAAGCAAAGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000191440.7 |
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| 3UTR TCA 72 bp | GTCACATGCAGTCCCGGCAGGAGGCCCATGTACTGCTaGGGTCCCTGCAGCTTGGCTAGGCGCGTTGGCTGG | + |
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Preference number: 3 (lower is better) Translates to: VTCSPGRRPMYC*GPCSLARRVGW Trigger: CCAGCCAACGCGCCTAGCCAAGCTGCAGGGACCTCAGCAGTACATGGGCCTCCTGCCGGGACTGCATGTGAC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000191440.7 |
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| 3UTR TCA 72 bp | TGCTTCCATGAGGAGAGAAGAGGGACCTCTGACGCCTaGACATGGCTCATGGCCCCTGGGGTGCCAGGCAGG | + |
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Preference number: 3 (lower is better) Translates to: CFHEERRGTSDA*TWLMAPGVPGR Trigger: CCTGCCTGGCACCCCAGGGGCCATGAGCCATGTTCAGGCGTCAGAGGTCCCTCTTCTCTCCTCATGGAAGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000003436.12 ENSMUST00000189605.2 ENSMUST00000191440.7 |
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| CDS-3UTR CCA 90 bp | CACCTTCTCGATGCTGAGGGAAAAGATGCACAGGCTGGAGCCCCACCCTTTCTCGCGGCCCGGGCAGGGTaGGCAGCAGAACAGGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: HLLDAEGKDAQAGAPPFLAARAG*AAEQAA Trigger: TGCTGCCTGTTCTGCTGCCCACCCTGCCCGGGCCGC...GAGAAAGGGTGGGGCTCCAGCCTGTGCATCTTTTCCCTCAGCATCGAGAAGGTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000191440.7 |
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| CDS-3UTR CCA 90 bp | CTCTTTGCTTCCATGAGGAGAGAAGAGGGACCTCTGACGCCTGAACATGGCTCAGCGGCCCGGGCAGGGTaGGCAGCAGAACAGGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: LFASMRREEGPLTPEHGSAARAG*AAEQAA Trigger: TGCTGCCTGTTCTGCTGCCCACCCTGCCCGGGCCGC...TGAGCCATGTTCAGGCGTCAGAGGTCCCTCTTCTCTCCTCATGGAAGCAAAGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003436.12 ENSMUST00000191440.7 |
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| CDS-3UTR GCA 90 bp | CACCTTCTCGATGCTGAGGGAAAAGATGCACAGGCTGGAGCCCCACCCTTTCTCCTGGTACGCAGGGCCTaGCAGGCTGCATCAATGTCA | + |
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Preference number: 4 (lower is better) Translates to: HLLDAEGKDAQAGAPPFLLVRRA*QAASMS Trigger: TGACATTGATGCAGCCTGGCAGGCCCTGCGTACCAG...GAGAAAGGGTGGGGCTCCAGCCTGTGCATCTTTTCCCTCAGCATCGAGAAGGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000191440.7 |
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| CDS-3UTR CCA 90 bp | CACCTTCTCGATGCTGAGGGAAAAGATGCACAGGCTGGAGCCCCACCCTTTCTCACGCCAGATCCACTGTaGGCACAGTGCCAATGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: HLLDAEGKDAQAGAPPFLTPDPL*AQCQCS Trigger: AGAGCATTGGCACTGTGCCCACAGTGGATCTGGCGT...GAGAAAGGGTGGGGCTCCAGCCTGTGCATCTTTTCCCTCAGCATCGAGAAGGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000191440.7 |
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| CDS-3UTR CCA 90 bp | CTCTTTGCTTCCATGAGGAGAGAAGAGGGACCTCTGACGCCTGAACATGGCTCACGGCTCCACAGCCTTTaGGCAGCGCTCATACAGTGC | + |
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Preference number: 4 (lower is better) Translates to: LFASMRREEGPLTPEHGSRLHSL*AALIQC Trigger: GCACTGTATGAGCGCTGCCCAAAGGCTGTGGAGCCG...TGAGCCATGTTCAGGCGTCAGAGGTCCCTCTTCTCTCCTCATGGAAGCAAAGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003436.12 ENSMUST00000189605.2 |
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| CDS-3UTR GCA 90 bp | CTCTTTGCTTCCATGAGGAGAGAAGAGGGACCTCTGACGCCTGAACATGGCTCACTGGTACGCAGGGCCTaGCAGGCTGCATCAATGTCA | + |
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Preference number: 4 (lower is better) Translates to: LFASMRREEGPLTPEHGSLVRRA*QAASMS Trigger: TGACATTGATGCAGCCTGGCAGGCCCTGCGTACCAG...TGAGCCATGTTCAGGCGTCAGAGGTCCCTCTTCTCTCCTCATGGAAGCAAAGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003436.12 ENSMUST00000189605.2 ENSMUST00000191440.7 |
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| CDS-3UTR CCA 90 bp | CTCTTTGCTTCCATGAGGAGAGAAGAGGGACCTCTGACGCCTGAACATGGCTCAGTACCAGAGAGTAGGTaGGATCGGGAGGCAGGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: LFASMRREEGPLTPEHGSVPESR*DREAGR Trigger: CCTTCCTGCCTCCCGATCCCACCTACTCTCTGGTAC...TGAGCCATGTTCAGGCGTCAGAGGTCCCTCTTCTCTCCTCATGGAAGCAAAGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003436.12 ENSMUST00000191440.7 |
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| CDS-3UTR GCA 90 bp | CTCTTTGCTTCCATGAGGAGAGAAGAGGGACCTCTGACGCCTGAACATGGCTCAAGATGTTGCAGCCGATaGGTGTGCCCAGGCCAACAT | + |
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Preference number: 4 (lower is better) Translates to: LFASMRREEGPLTPEHGSRCCSR*VCPGQH Trigger: ATGTTGGCCTGGGCACACGCATCGGCTGCAACATCT...TGAGCCATGTTCAGGCGTCAGAGGTCCCTCTTCTCTCCTCATGGAAGCAAAGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003436.12 ENSMUST00000189605.2 ENSMUST00000191440.7 |
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| CDS-3UTR GCA 90 bp | CTCTTTGCTTCCATGAGGAGAGAAGAGGGACCTCTGACGCCTGAACATGGCTCACCACTGTGGGCACAGTaGCAATGCTCTGGCCATACA | + |
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Preference number: 4 (lower is better) Translates to: LFASMRREEGPLTPEHGSPLWAQ*QCSGHT Trigger: TGTATGGCCAGAGCATTGGCACTGTGCCCACAGTGG...TGAGCCATGTTCAGGCGTCAGAGGTCCCTCTTCTCTCCTCATGGAAGCAAAGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003436.12 ENSMUST00000191440.7 |
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| CDS-3UTR CCA 90 bp | CTCTTTGCTTCCATGAGGAGAGAAGAGGGACCTCTGACGCCTGAACATGGCTCAACGCCAGATCCACTGTaGGCACAGTGCCAATGCTCT | + |
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Preference number: 4 (lower is better) Translates to: LFASMRREEGPLTPEHGSTPDPL*AQCQCS Trigger: AGAGCATTGGCACTGTGCCCACAGTGGATCTGGCGT...TGAGCCATGTTCAGGCGTCAGAGGTCCCTCTTCTCTCCTCATGGAAGCAAAGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003436.12 ENSMUST00000191440.7 |
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| CDS-3UTR GCA 90 bp | CTCTTTGCTTCCATGAGGAGAGAAGAGGGACCTCTGACGCCTGAACATGGCTCATCCACTGCATTGCCATaGGAGAAGAGAACCGTGTAC | + |
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Preference number: 4 (lower is better) Translates to: LFASMRREEGPLTPEHGSSTALP*EKRTVY Trigger: GTACACGGTTCTCTTCTCGCATGGCAATGCAGTGGA...TGAGCCATGTTCAGGCGTCAGAGGTCCCTCTTCTCTCCTCATGGAAGCAAAGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003436.12 ENSMUST00000189605.2 ENSMUST00000191440.7 |
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