Pregenerated sensors for ABHD13 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000040396Ensembl transcript IDs: ENSMUST00000048216.6, ENSMUST00000139793.8
Found 128 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ACTGAATGCTGTTCTTCCACCCCACAAGTCCCAGTCAGCAAAAGCTaGACAGAAAGCAGCAAACAGCAAGGAAGGAGCAACTGTTCCATT | + |
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Preference number: 1 (lower is better) Translates to: TECCSSTPQVPVSKS*TESSKQQGRSNCSI Trigger: AATGGAACAGTTGCTCCTTCCTTGCTGTTTGCTGCTTTCTGTTCAGCTTTTGCTGACTGGGACTTGTGGGGTGGAAGAACAGCATTCAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048216.6 ENSMUST00000139793.8 |
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| 3UTR TCA 90 bp | AGTGCTGAGGCCTTTCAAAGCTCAGAGTCACTGTGCAGACCAGTATaGACACACACCCAGAAAAGACATCATTCTCCACACATTGAAACC | + |
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Preference number: 1 (lower is better) Translates to: SAEAFQSSESLCRPV*THTQKRHHSPHIET Trigger: GGTTTCAATGTGTGGAGAATGATGTCTTTTCTGGGTGTGTGTTCATACTGGTCTGCACAGTGACTCTGAGCTTTGAAAGGCCTCAGCACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048216.6 ENSMUST00000139793.8 |
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| 3UTR GCA 90 bp | AGGTACTGGGACTTCATTCAGATGAAAGGATTGCATAAGGCCGTGTaGACACGTGCTGAGTTATCCTCACTCAACCATCAGCTAGTTCTA | + |
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Preference number: 1 (lower is better) Translates to: RYWDFIQMKGLHKAV*TRAELSSLNHQLVL Trigger: TAGAACTAGCTGATGGTTGAGTGAGGATAACTCAGCACGTGTGCACACGGCCTTATGCAATCCTTTCATCTGAATGAAGTCCCAGTACCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048216.6 ENSMUST00000139793.8 |
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| 3UTR TCA 90 bp | GAGATTGACAGACCATGGCCATTCCCACCAATGAAGAGTCTGAAGTaGAGAAATGATCCTGCAGTAGTCATGTTTCAGAGACCAAATGAG | + |
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Preference number: 1 (lower is better) Translates to: EIDRPWPFPPMKSLK*RNDPAVVMFQRPNE Trigger: CTCATTTGGTCTCTGAAACATGACTACTGCAGGATCATTTCTTCACTTCAGACTCTTCATTGGTGGGAATGGCCATGGTCTGTCAATCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048216.6 ENSMUST00000139793.8 |
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| 3UTR GCA 90 bp | TATGCCATGGCAGCTCAAGTCTACATTCTGGCTGTTGCTACATATTaGCCTTTCGGCAGATTAGTATTCAGGATAGTCATTCTACATAGC | + |
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Preference number: 1 (lower is better) Translates to: YAMAAQVYILAVATY*PFGRLVFRIVILHS Trigger: GCTATGTAGAATGACTATCCTGAATACTAATCTGCCGAAAGGGCAATATGTAGCAACAGCCAGAATGTAGACTTGAGCTGCCATGGCATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048216.6 ENSMUST00000139793.8 |
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| 3UTR CCA 90 bp | CTGTTTATTATTAGGAAAAAGCTGGATCTCAGTAGCAGCAGAACATaGAATCTGCCCACAGGCCTCACACTCATTCCTCACCGAAATAAA | + |
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Preference number: 1 (lower is better) Translates to: LFIIRKKLDLSSSRT*NLPTGLTLIPHRNK Trigger: TTTATTTCGGTGAGGAATGAGTGTGAGGCCTGTGGGCAGATTCCATGTTCTGCTGCTACTGAGATCCAGCTTTTTCCTAATAATAAACAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048216.6 ENSMUST00000139793.8 |
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| 3UTR TCA 90 bp | TGTTTTTCTTTCATTCTGAAATTTACTTCCAAACAGTTCAATAAATaGTGCTTGCCTCTGTCAGGTCAGGCACCTTCTAGGTACTGGGAC | + |
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Preference number: 1 (lower is better) Translates to: CFSFILKFTSKQFNK*CLPLSGQAPSRYWD Trigger: GTCCCAGTACCTAGAAGGTGCCTGACCTGACAGAGGCAAGCATCATTTATTGAACTGTTTGGAAGTAAATTTCAGAATGAAAGAAAAACA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048216.6 ENSMUST00000139793.8 |
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| 3UTR-3UTR GCA 90 bp | CTGCCTAACACACAAGGCAGCAGCACTTCCGATGACGGGGAGCGAGGTGCATATGCAGAACATGGAATCTaGCCACAGGCCTCACACTCA | + |
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Preference number: 2 (lower is better) Translates to: LPNTQGSSTSDDGERGAYAEHGI*PQASHS Trigger: TGAGTGTGAGGCCTGTGGGCAGATTCCATGTTCTGC...ATATGCACCTCGCTCCCCGTCATCGGAAGTGCTGCTGCCTTGTGTGTTAGGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048216.6 ENSMUST00000139793.8 |
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| 3UTR-3UTR CCA 90 bp | CTGCCTAACACACAAGGCAGCAGCACTTCCGATGACGGGGAGCGAGGTGCATATAGTAGCAGCAGAACATaGAATCTGCCCACAGGCCTC | + |
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Preference number: 2 (lower is better) Translates to: LPNTQGSSTSDDGERGAYSSSRT*NLPTGL Trigger: GAGGCCTGTGGGCAGATTCCATGTTCTGCTGCTACT...ATATGCACCTCGCTCCCCGTCATCGGAAGTGCTGCTGCCTTGTGTGTTAGGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048216.6 ENSMUST00000139793.8 |
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| 3UTR-3UTR TCA 90 bp | CTGCCTAACACACAAGGCAGCAGCACTTCCGATGACGGGGAGCGAGGTGCATATGGGACTTCATTCAGATaGAAGGATTGCATAAGGCCG | + |
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Preference number: 2 (lower is better) Translates to: LPNTQGSSTSDDGERGAYGTSFR*KDCIRP Trigger: CGGCCTTATGCAATCCTTTCATCTGAATGAAGTCCC...ATATGCACCTCGCTCCCCGTCATCGGAAGTGCTGCTGCCTTGTGTGTTAGGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048216.6 ENSMUST00000139793.8 |
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| 3UTR-3UTR TCA 90 bp | CTGCCTAACACACAAGGCAGCAGCACTTCCGATGACGGGGAGCGAGGTGCATATCCAGTCAGCAAAAGCTaGACAGAAAGCAGCAAACAG | + |
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Preference number: 2 (lower is better) Translates to: LPNTQGSSTSDDGERGAYPVSKS*TESSKQ Trigger: CTGTTTGCTGCTTTCTGTTCAGCTTTTGCTGACTGG...ATATGCACCTCGCTCCCCGTCATCGGAAGTGCTGCTGCCTTGTGTGTTAGGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048216.6 ENSMUST00000139793.8 |
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| 3UTR-3UTR CCA 90 bp | GAAGGGCTCAAGCACAGCTACCTGGTGAGGACTGTGGGAAAGGACCTGGCAGGTACAGGATCATCAGAATaGAGTGCTGAGGCCTTTCAA | + |
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Preference number: 2 (lower is better) Translates to: EGLKHSYLVRTVGKDLAGTGSSE*SAEAFQ Trigger: TTGAAAGGCCTCAGCACTCCATTCTGATGATCCTGT...ACCTGCCAGGTCCTTTCCCACAGTCCTCACCAGGTAGCTGTGCTTGAGCCCTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048216.6 ENSMUST00000139793.8 |
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| 3UTR-3UTR TCA 90 bp | CTGCCTAACACACAAGGCAGCAGCACTTCCGATGACGGGGAGCGAGGTGCATATTCATTCTCCACACATTaGAACCCAAGGCATCCATCA | + |
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Preference number: 2 (lower is better) Translates to: LPNTQGSSTSDDGERGAYSFSTH*NPRHPS Trigger: TGATGGATGCCTTGGGTTTCAATGTGTGGAGAATGA...ATATGCACCTCGCTCCCCGTCATCGGAAGTGCTGCTGCCTTGTGTGTTAGGCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048216.6 ENSMUST00000139793.8 |
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| 3UTR-3UTR TCA 90 bp | CTGCCTAACACACAAGGCAGCAGCACTTCCGATGACGGGGAGCGAGGTGCATATTTGTCTCTGCTGAAGTaGAGAACTCTCTCTAGGAGA | + |
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Preference number: 2 (lower is better) Translates to: LPNTQGSSTSDDGERGAYLSLLK*RTLSRR Trigger: TCTCCTAGAGAGAGTTCTTCACTTCAGCAGAGACAA...ATATGCACCTCGCTCCCCGTCATCGGAAGTGCTGCTGCCTTGTGTGTTAGGCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048216.6 ENSMUST00000139793.8 |
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| 3UTR-3UTR CCA 90 bp | GAAGGGCTCAAGCACAGCTACCTGGTGAGGACTGTGGGAAAGGACCTGGCAGGTGCACCTTCTAGGTACTaGGACTTCATTCAGATGAAA | + |
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Preference number: 2 (lower is better) Translates to: EGLKHSYLVRTVGKDLAGAPSRY*DFIQMK Trigger: TTTCATCTGAATGAAGTCCCAGTACCTAGAAGGTGC...ACCTGCCAGGTCCTTTCCCACAGTCCTCACCAGGTAGCTGTGCTTGAGCCCTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048216.6 ENSMUST00000139793.8 |
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| 3UTR-3UTR TCA 90 bp | CTGCCTAACACACAAGGCAGCAGCACTTCCGATGACGGGGAGCGAGGTGCATATCAAGAACCTTTTGGATaGCATCTATCAAACCAGCGT | + |
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Preference number: 2 (lower is better) Translates to: LPNTQGSSTSDDGERGAYQEPFG*HLSNQR Trigger: ACGCTGGTTTGATAGATGTCATCCAAAAGGTTCTTG...ATATGCACCTCGCTCCCCGTCATCGGAAGTGCTGCTGCCTTGTGTGTTAGGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048216.6 ENSMUST00000139793.8 |
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| 3UTR-3UTR CCA 90 bp | GAAGGGCTCAAGCACAGCTACCTGGTGAGGACTGTGGGAAAGGACCTGGCAGGTCCCAGTCTGAAAATTTaGAAAGTTACAGGATCATCA | + |
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Preference number: 2 (lower is better) Translates to: EGLKHSYLVRTVGKDLAGPSLKI*KVTGSS Trigger: TGATGATCCTGTAACTTTCCAAATTTTCAGACTGGG...ACCTGCCAGGTCCTTTCCCACAGTCCTCACCAGGTAGCTGTGCTTGAGCCCTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048216.6 ENSMUST00000139793.8 |
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| 3UTR-3UTR CCA 90 bp | CTGCCTAACACACAAGGCAGCAGCACTTCCGATGACGGGGAGCGAGGTGCATATCTCAAAAGTTTGAGTTaGTTTTCTATCCCTACTCAT | + |
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Preference number: 2 (lower is better) Translates to: LPNTQGSSTSDDGERGAYLKSLS*FSIPTH Trigger: ATGAGTAGGGATAGAAAACCAACTCAAACTTTTGAG...ATATGCACCTCGCTCCCCGTCATCGGAAGTGCTGCTGCCTTGTGTGTTAGGCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000048216.6 ENSMUST00000139793.8 |
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| 3UTR-3UTR GCA 90 bp | ATAGGAAAAAGGCTTGAGGGAGAGAGTATCAGAGGGCTCAAGTATGTAATGATGGCAGAACATGGAATCTaGCCACAGGCCTCACACTCA | + |
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Preference number: 2 (lower is better) Translates to: IGKRLEGESIRGLKYVMMAEHGI*PQASHS Trigger: TGAGTGTGAGGCCTGTGGGCAGATTCCATGTTCTGC...CATCATTACATACTTGAGCCCTCTGATACTCTCTCCCTCAAGCCTTTTTCCTAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048216.6 ENSMUST00000139793.8 |
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| 3UTR-3UTR TCA 90 bp | GGGTCTATCACGGCCCTCAAAAGTTTGAGTTGGTTTTCTATCCCTACTCATCTAGGGACTTCATTCAGATaGAAGGATTGCATAAGGCCG | + |
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Preference number: 2 (lower is better) Translates to: GSITALKSLSWFSIPTHLGTSFR*KDCIRP Trigger: CGGCCTTATGCAATCCTTTCATCTGAATGAAGTCCC...TAGATGAGTAGGGATAGAAAACCAACTCAAACTTTTGAGGGCCGTGATAGACCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048216.6 ENSMUST00000139793.8 |
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| 3UTR-3UTR TCA 90 bp | GGGTCTATCACGGCCCTCAAAAGTTTGAGTTGGTTTTCTATCCCTACTCATCTACCAGTCAGCAAAAGCTaGACAGAAAGCAGCAAACAG | + |
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Preference number: 2 (lower is better) Translates to: GSITALKSLSWFSIPTHLPVSKS*TESSKQ Trigger: CTGTTTGCTGCTTTCTGTTCAGCTTTTGCTGACTGG...TAGATGAGTAGGGATAGAAAACCAACTCAAACTTTTGAGGGCCGTGATAGACCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000048216.6 ENSMUST00000139793.8 |
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| 3UTR-3UTR TCA 90 bp | CGCAGCAGCACTTGCTTGCTAACCGTGATTGTCCCAATAATCACTAAAGGAAAGCAAGAACCTTTTGGATaGCATCTATCAAACCAGCGT | + |
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Preference number: 2 (lower is better) Translates to: RSSTCLLTVIVPIITKGKQEPFG*HLSNQR Trigger: ACGCTGGTTTGATAGATGTCATCCAAAAGGTTCTTG...CTTTCCTTTAGTGATTATTGGGACAATCACGGTTAGCAAGCAAGTGCTGCTGCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048216.6 ENSMUST00000139793.8 |
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| 3UTR-3UTR TCA 90 bp | GGGTCTATCACGGCCCTCAAAAGTTTGAGTTGGTTTTCTATCCCTACTCATCTATTGTCTCTGCTGAAGTaGAGAACTCTCTCTAGGAGA | + |
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Preference number: 2 (lower is better) Translates to: GSITALKSLSWFSIPTHLLSLLK*RTLSRR Trigger: TCTCCTAGAGAGAGTTCTTCACTTCAGCAGAGACAA...TAGATGAGTAGGGATAGAAAACCAACTCAAACTTTTGAGGGCCGTGATAGACCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048216.6 ENSMUST00000139793.8 |
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| 3UTR-3UTR GCA 90 bp | GGGTCTATCACGGCCCTCAAAAGTTTGAGTTGGTTTTCTATCCCTACTCATCTATCAATAAATGATGCTTaGCTCTGTCAGGTCAGGCAC | + |
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Preference number: 2 (lower is better) Translates to: GSITALKSLSWFSIPTHLSINDA*LCQVRH Trigger: GTGCCTGACCTGACAGAGGCAAGCATCATTTATTGA...TAGATGAGTAGGGATAGAAAACCAACTCAAACTTTTGAGGGCCGTGATAGACCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048216.6 ENSMUST00000139793.8 |
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| 3UTR-3UTR TCA 90 bp | GGGTCTATCACGGCCCTCAAAAGTTTGAGTTGGTTTTCTATCCCTACTCATCTACATAGTTGTCTCTGCTaGAGTGAAGAACTCTCTCTA | + |
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Preference number: 2 (lower is better) Translates to: GSITALKSLSWFSIPTHLHSCLC*SEELSL Trigger: TAGAGAGAGTTCTTCACTTCAGCAGAGACAACTATG...TAGATGAGTAGGGATAGAAAACCAACTCAAACTTTTGAGGGCCGTGATAGACCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048216.6 ENSMUST00000139793.8 |
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| 3UTR-3UTR TCA 90 bp | ATAGGAAAAAGGCTTGAGGGAGAGAGTATCAGAGGGCTCAAGTATGTAATGATGCGGCCCTCAAAAGTTTaGGTTGGTTTTCTATCCCTA | + |
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Preference number: 2 (lower is better) Translates to: IGKRLEGESIRGLKYVMMRPSKV*VGFLSL Trigger: TAGGGATAGAAAACCAACTCAAACTTTTGAGGGCCG...CATCATTACATACTTGAGCCCTCTGATACTCTCTCCCTCAAGCCTTTTTCCTAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000048216.6 ENSMUST00000139793.8 |
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| 3UTR-3UTR GCA 90 bp | ATAGGAAAAAGGCTTGAGGGAGAGAGTATCAGAGGGCTCAAGTATGTAATGATGTCAATAAATGATGCTTaGCTCTGTCAGGTCAGGCAC | + |
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Preference number: 2 (lower is better) Translates to: IGKRLEGESIRGLKYVMMSINDA*LCQVRH Trigger: GTGCCTGACCTGACAGAGGCAAGCATCATTTATTGA...CATCATTACATACTTGAGCCCTCTGATACTCTCTCCCTCAAGCCTTTTTCCTAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048216.6 ENSMUST00000139793.8 |
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| 3UTR-3UTR CCA 90 bp | GGGTCTATCACGGCCCTCAAAAGTTTGAGTTGGTTTTCTATCCCTACTCATCTAGCACCTTCTAGGTACTaGGACTTCATTCAGATGAAA | + |
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Preference number: 2 (lower is better) Translates to: GSITALKSLSWFSIPTHLAPSRY*DFIQMK Trigger: TTTCATCTGAATGAAGTCCCAGTACCTAGAAGGTGC...TAGATGAGTAGGGATAGAAAACCAACTCAAACTTTTGAGGGCCGTGATAGACCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048216.6 ENSMUST00000139793.8 |
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| 3UTR-3UTR TCA 90 bp | CGCAGCAGCACTTGCTTGCTAACCGTGATTGTCCCAATAATCACTAAAGGAAAGTTAAGAAGCCCAGTCTaGAAATTTGGAAAGTTACAG | + |
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Preference number: 2 (lower is better) Translates to: RSSTCLLTVIVPIITKGKLRSPV*KFGKLQ Trigger: CTGTAACTTTCCAAATTTTCAGACTGGGCTTCTTAA...CTTTCCTTTAGTGATTATTGGGACAATCACGGTTAGCAAGCAAGTGCTGCTGCG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048216.6 ENSMUST00000139793.8 |
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| 3UTR-3UTR TCA 90 bp | ATAGGAAAAAGGCTTGAGGGAGAGAGTATCAGAGGGCTCAAGTATGTAATGATGGGAAAGACAGACACCTaGAGGTTTCTTGTTTCTATC | + |
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Preference number: 2 (lower is better) Translates to: IGKRLEGESIRGLKYVMMGKTDT*RFLVSI Trigger: GATAGAAACAAGAAACCTTCAGGTGTCTGTCTTTCC...CATCATTACATACTTGAGCCCTCTGATACTCTCTCCCTCAAGCCTTTTTCCTAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048216.6 ENSMUST00000139793.8 |
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| 3UTR-3UTR TCA 90 bp | GGGTCTATCACGGCCCTCAAAAGTTTGAGTTGGTTTTCTATCCCTACTCATCTACTACATAGCAAAGATTaGCAAGATGAAAAGCAGCCT | + |
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Preference number: 2 (lower is better) Translates to: GSITALKSLSWFSIPTHLLHSKD*QDEKQP Trigger: AGGCTGCTTTTCATCTTGTCAATCTTTGCTATGTAG...TAGATGAGTAGGGATAGAAAACCAACTCAAACTTTTGAGGGCCGTGATAGACCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000048216.6 ENSMUST00000139793.8 |
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| 3UTR-3UTR GCA 90 bp | ATAGGAAAAAGGCTTGAGGGAGAGAGTATCAGAGGGCTCAAGTATGTAATGATGGCTGTTGCTACATATTaGCCTTTCGGCAGATTAGTA | + |
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Preference number: 2 (lower is better) Translates to: IGKRLEGESIRGLKYVMMAVATY*PFGRLV Trigger: TACTAATCTGCCGAAAGGGCAATATGTAGCAACAGC...CATCATTACATACTTGAGCCCTCTGATACTCTCTCCCTCAAGCCTTTTTCCTAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048216.6 ENSMUST00000139793.8 |
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| 3UTR-3UTR CCA 90 bp | CGCAGCAGCACTTGCTTGCTAACCGTGATTGTCCCAATAATCACTAAAGGAAAGCCCAGTCTGAAAATTTaGAAAGTTACAGGATCATCA | + |
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Preference number: 2 (lower is better) Translates to: RSSTCLLTVIVPIITKGKPSLKI*KVTGSS Trigger: TGATGATCCTGTAACTTTCCAAATTTTCAGACTGGG...CTTTCCTTTAGTGATTATTGGGACAATCACGGTTAGCAAGCAAGTGCTGCTGCG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048216.6 ENSMUST00000139793.8 |
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| 3UTR-3UTR TCA 90 bp | ATAGGAAAAAGGCTTGAGGGAGAGAGTATCAGAGGGCTCAAGTATGTAATGATGGTTTCAGAGACCAAATaGGAGCTTGCAGAAATGATA | + |
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Preference number: 2 (lower is better) Translates to: IGKRLEGESIRGLKYVMMVSETK*ELAEMI Trigger: TATCATTTCTGCAAGCTCTCATTTGGTCTCTGAAAC...CATCATTACATACTTGAGCCCTCTGATACTCTCTCCCTCAAGCCTTTTTCCTAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048216.6 ENSMUST00000139793.8 |
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| 3UTR-3UTR GCA 90 bp | ATAGGAAAAAGGCTTGAGGGAGAGAGTATCAGAGGGCTCAAGTATGTAATGATGCCCATTACACAGAACTaGAACATTAAGCCATACTTG | + |
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Preference number: 2 (lower is better) Translates to: IGKRLEGESIRGLKYVMMPITQN*NIKPYL Trigger: CAAGTATGGCTTAATGTTGCAGTTCTGTGTAATGGG...CATCATTACATACTTGAGCCCTCTGATACTCTCTCCCTCAAGCCTTTTTCCTAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048216.6 ENSMUST00000139793.8 |
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| 3UTR-3UTR CCA 90 bp | ATAGGAAAAAGGCTTGAGGGAGAGAGTATCAGAGGGCTCAAGTATGTAATGATGCCAGCAAGAACCTTTTaGATGACATCTATCAAACCA | + |
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Preference number: 2 (lower is better) Translates to: IGKRLEGESIRGLKYVMMPARTF*MTSIKP Trigger: TGGTTTGATAGATGTCATCCAAAAGGTTCTTGCTGG...CATCATTACATACTTGAGCCCTCTGATACTCTCTCCCTCAAGCCTTTTTCCTAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048216.6 ENSMUST00000139793.8 |
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| 3UTR-3UTR TCA 90 bp | ATAGGAAAAAGGCTTGAGGGAGAGAGTATCAGAGGGCTCAAGTATGTAATGATGTCTAAAATTGTGTTCTaGAGTTTTCTGTCCATCCAC | + |
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Preference number: 2 (lower is better) Translates to: IGKRLEGESIRGLKYVMMSKIVF*SFLSIH Trigger: GTGGATGGACAGAAAACTTCAGAACACAATTTTAGA...CATCATTACATACTTGAGCCCTCTGATACTCTCTCCCTCAAGCCTTTTTCCTAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000048216.6 ENSMUST00000139793.8 |
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| 3UTR-3UTR TCA 90 bp | ATAGGAAAAAGGCTTGAGGGAGAGAGTATCAGAGGGCTCAAGTATGTAATGATGATGTTACCAGAACCATaGTCTGTCTCAACATTTAAG | + |
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Preference number: 2 (lower is better) Translates to: IGKRLEGESIRGLKYVMMMLPEP*SVSTFK Trigger: CTTAAATGTTGAGACAGATCATGGTTCTGGTAACAT...CATCATTACATACTTGAGCCCTCTGATACTCTCTCCCTCAAGCCTTTTTCCTAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048216.6 ENSMUST00000139793.8 |
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| 3UTR-3UTR CCA 90 bp | TCAGCTAGTTCTATCCCTTGCTGTGGCTGTTATTGTTTAGCTGAAGATTCACAAGGTATTTCACTAGGCTaGAGTTCTGATGAGAATATC | + |
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Preference number: 2 (lower is better) Translates to: SASSIPCCGCYCLAEDSQGISLG*SSDENI Trigger: GATATTCTCATCAGAACTCCAGCCTAGTGAAATACC...TTGTGAATCTTCAGCTAAACAATAACAGCCACAGCAAGGGATAGAACTAGCTGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048216.6 ENSMUST00000139793.8 |
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| 3UTR-3UTR CCA 90 bp | AGTTCTATCCCTTGCTGTGGCTGTTATTGTTTAGCTGAAGATTCACAAACTGACGGTATTTCACTAGGCTaGAGTTCTGATGAGAATATC | + |
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Preference number: 2 (lower is better) Translates to: SSIPCCGCYCLAEDSQTDGISLG*SSDENI Trigger: GATATTCTCATCAGAACTCCAGCCTAGTGAAATACC...GTCAGTTTGTGAATCTTCAGCTAAACAATAACAGCCACAGCAAGGGATAGAACT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048216.6 ENSMUST00000139793.8 |
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| 3UTR-3UTR CCA 90 bp | ATAGGAAAAAGGCTTGAGGGAGAGAGTATCAGAGGGCTCAAGTATGTAATGATGTTATTAGGAAAAAGCTaGATCTCAGTAGCAGCAGAA | + |
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Preference number: 2 (lower is better) Translates to: IGKRLEGESIRGLKYVMMLLGKS*ISVAAE Trigger: TTCTGCTGCTACTGAGATCCAGCTTTTTCCTAATAA...CATCATTACATACTTGAGCCCTCTGATACTCTCTCCCTCAAGCCTTTTTCCTAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000048216.6 ENSMUST00000139793.8 |
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| 3UTR-3UTR TCA 90 bp | TCAGCTAGTTCTATCCCTTGCTGTGGCTGTTATTGTTTAGCTGAAGATTCACAATTAAGAAGCCCAGTCTaGAAATTTGGAAAGTTACAG | + |
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Preference number: 2 (lower is better) Translates to: SASSIPCCGCYCLAEDSQLRSPV*KFGKLQ Trigger: CTGTAACTTTCCAAATTTTCAGACTGGGCTTCTTAA...TTGTGAATCTTCAGCTAAACAATAACAGCCACAGCAAGGGATAGAACTAGCTGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048216.6 ENSMUST00000139793.8 |
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| 3UTR-3UTR CCA 90 bp | ATAGGAAAAAGGCTTGAGGGAGAGAGTATCAGAGGGCTCAAGTATGTAATGATGACGGCACATCTATATTaGAAAAAGGTCCTGTTTATT | + |
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Preference number: 2 (lower is better) Translates to: IGKRLEGESIRGLKYVMMTAHLY*KKVLFI Trigger: AATAAACAGGACCTTTTTCCAATATAGATGTGCCGT...CATCATTACATACTTGAGCCCTCTGATACTCTCTCCCTCAAGCCTTTTTCCTAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000048216.6 ENSMUST00000139793.8 |
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| 3UTR-3UTR CCA 90 bp | AGTTCTATCCCTTGCTGTGGCTGTTATTGTTTAGCTGAAGATTCACAAACTGACACGGCACATCTATATTaGAAAAAGGTCCTGTTTATT | + |
|
Preference number: 2 (lower is better) Translates to: SSIPCCGCYCLAEDSQTDTAHLY*KKVLFI Trigger: AATAAACAGGACCTTTTTCCAATATAGATGTGCCGT...GTCAGTTTGTGAATCTTCAGCTAAACAATAACAGCCACAGCAAGGGATAGAACT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048216.6 ENSMUST00000139793.8 |
||
| 3UTR-3UTR CAA 90 bp | GAAGGGCTCAAGCACAGCTACCTGGTGAGGACTGTGGGAAAGGACCTGGCAGGTACACCTGAAGGTTTCTaGTTTCTATCTCCATCTGAG | + |
|
Preference number: 3 (lower is better) Translates to: EGLKHSYLVRTVGKDLAGTPEGF*FLSPSE Trigger: CTCAGATGGAGATAGAAACAAGAAACCTTCAGGTGT...ACCTGCCAGGTCCTTTCCCACAGTCCTCACCAGGTAGCTGTGCTTGAGCCCTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048216.6 ENSMUST00000139793.8 |
||
| 3UTR TCA 72 bp | GTCAGGCACCTTCTAGGTACTGGGACTTCATTCAGATaGAAGGATTGCATAAGGCCGTGTGCACACGTGCTG | + |
|
Preference number: 3 (lower is better) Translates to: VRHLLGTGTSFR*KDCIRPCAHVL Trigger: CAGCACGTGTGCACACGGCCTTATGCAATCCTTTCATCTGAATGAAGTCCCAGTACCTAGAAGGTGCCTGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048216.6 ENSMUST00000139793.8 |
||
| 3UTR GCA 72 bp | GTCGAGACGACTGCCTCATTATCACTGTGCTCTAGCTaGTGTGGAAGGTCAATCATACAGCCAAGCCATCTG | + |
|
Preference number: 3 (lower is better) Translates to: VETTASLSLCSS*CGRSIIQPSHL Trigger: CAGATGGCTTGGCTGTATGATTGACCTTCCACAGCAGCTAGAGCACAGTGATAATGAGGCAGTCGTCTCGAC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048216.6 ENSMUST00000139793.8 |
||
| 3UTR CCA 72 bp | TGCTTGCCTCTGTCAGGTCAGGCACCTTCTAGGTACTaGGACTTCATTCAGATGAAAGGATTGCATAAGGCC | + |
|
Preference number: 3 (lower is better) Translates to: CLPLSGQAPSRY*DFIQMKGLHKA Trigger: GGCCTTATGCAATCCTTTCATCTGAATGAAGTCCCAGTACCTAGAAGGTGCCTGACCTGACAGAGGCAAGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048216.6 ENSMUST00000139793.8 |
||
| 3UTR GCA 72 bp | AAAAGCTGGATCTCAGTAGCAGCAGAACATGGAATCTaGCCACAGGCCTCACACTCATTCCTCACCGAAATA | + |
|
Preference number: 3 (lower is better) Translates to: KSWISVAAEHGI*PQASHSFLTEI Trigger: TATTTCGGTGAGGAATGAGTGTGAGGCCTGTGGGCAGATTCCATGTTCTGCTGCTACTGAGATCCAGCTTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048216.6 ENSMUST00000139793.8 |
||
| 3UTR CCA 72 bp | ATTAGGAAAAAGCTGGATCTCAGTAGCAGCAGAACATaGAATCTGCCCACAGGCCTCACACTCATTCCTCAC | + |
|
Preference number: 3 (lower is better) Translates to: IRKKLDLSSSRT*NLPTGLTLIPH Trigger: GTGAGGAATGAGTGTGAGGCCTGTGGGCAGATTCCATGTTCTGCTGCTACTGAGATCCAGCTTTTTCCTAAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048216.6 ENSMUST00000139793.8 |
||
| 3UTR TCA 72 bp | ACAGCAAGGAAGGAGCAACTGTTCCATTTTAGTGGTTaGCACAACACATTGGTAAACTCCTCCAGGCCAAGG | + |
|
Preference number: 3 (lower is better) Translates to: TARKEQLFHFSG*HNTLVNSSRPR Trigger: CCTTGGCCTGGAGGAGTTTACCAATGTGTTGTGTCAACCACTAAAATGGAACAGTTGCTCCTTCCTTGCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048216.6 ENSMUST00000139793.8 |
||
| 3UTR GCA 72 bp | GACTTCATTCAGATGAAAGGATTGCATAAGGCCGTGTaGACACGTGCTGAGTTATCCTCACTCAACCATCAG | + |
|
Preference number: 3 (lower is better) Translates to: DFIQMKGLHKAV*TRAELSSLNHQ Trigger: CTGATGGTTGAGTGAGGATAACTCAGCACGTGTGCACACGGCCTTATGCAATCCTTTCATCTGAATGAAGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048216.6 ENSMUST00000139793.8 |
||
| 3UTR GCA 72 bp | GAACTCTCTCTAGGAGAGCAAGTTAGTACAACTGAATaGTGTTCTTCCACCCCACAAGTCCCAGTCAGCAAA | + |
|
Preference number: 3 (lower is better) Translates to: ELSLGEQVSTTE*CSSTPQVPVSK Trigger: TTTGCTGACTGGGACTTGTGGGGTGGAAGAACAGCATTCAGTTGTACTAACTTGCTCTCCTAGAGAGAGTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048216.6 ENSMUST00000139793.8 |
||
| 3UTR TCA 72 bp | AATTTGGAAAGTTACAGGATCATCAGAATGGAGTGCTaGGGCCTTTCAAAGCTCAGAGTCACTGTGCAGACC | + |
|
Preference number: 3 (lower is better) Translates to: NLESYRIIRMEC*GLSKLRVTVQT Trigger: GGTCTGCACAGTGACTCTGAGCTTTGAAAGGCCTCAGCACTCCATTCTGATGATCCTGTAACTTTCCAAATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048216.6 ENSMUST00000139793.8 |
||
| 3UTR-3UTR CAA 90 bp | CGCAGCAGCACTTGCTTGCTAACCGTGATTGTCCCAATAATCACTAAAGGAAAGACACCTGAAGGTTTCTaGTTTCTATCTCCATCTGAG | + |
|
Preference number: 3 (lower is better) Translates to: RSSTCLLTVIVPIITKGKTPEGF*FLSPSE Trigger: CTCAGATGGAGATAGAAACAAGAAACCTTCAGGTGT...CTTTCCTTTAGTGATTATTGGGACAATCACGGTTAGCAAGCAAGTGCTGCTGCG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048216.6 ENSMUST00000139793.8 |
||
| 3UTR-3UTR CAA 90 bp | GGGTCTATCACGGCCCTCAAAAGTTTGAGTTGGTTTTCTATCCCTACTCATCTAACCAGCAAGAACCTTTaGGATGACATCTATCAAACC | + |
|
Preference number: 3 (lower is better) Translates to: GSITALKSLSWFSIPTHLTSKNL*DDIYQT Trigger: GGTTTGATAGATGTCATCCAAAAGGTTCTTGCTGGT...TAGATGAGTAGGGATAGAAAACCAACTCAAACTTTTGAGGGCCGTGATAGACCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048216.6 ENSMUST00000139793.8 |
||
| 3UTR GCA 72 bp | GCAGCTCAAGTCTACATTCTGGCTGTTGCTACATATTaGCCTTTCGGCAGATTAGTATTCAGGATAGTCATT | + |
|
Preference number: 3 (lower is better) Translates to: AAQVYILAVATY*PFGRLVFRIVI Trigger: AATGACTATCCTGAATACTAATCTGCCGAAAGGGCAATATGTAGCAACAGCCAGAATGTAGACTTGAGCTGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048216.6 ENSMUST00000139793.8 |
||
| 3UTR-3UTR CAA 90 bp | ATAGGAAAAAGGCTTGAGGGAGAGAGTATCAGAGGGCTCAAGTATGTAATGATGGCCCAGTCTGAAAATTaGGAAAGTTACAGGATCATC | + |
|
Preference number: 3 (lower is better) Translates to: IGKRLEGESIRGLKYVMMAQSEN*ESYRII Trigger: GATGATCCTGTAACTTTCCAAATTTTCAGACTGGGC...CATCATTACATACTTGAGCCCTCTGATACTCTCTCCCTCAAGCCTTTTTCCTAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048216.6 ENSMUST00000139793.8 |
||
| 3UTR-3UTR CAA 90 bp | AGTTCTATCCCTTGCTGTGGCTGTTATTGTTTAGCTGAAGATTCACAAACTGACGCCCAGTCTGAAAATTaGGAAAGTTACAGGATCATC | + |
|
Preference number: 3 (lower is better) Translates to: SSIPCCGCYCLAEDSQTDAQSEN*ESYRII Trigger: GATGATCCTGTAACTTTCCAAATTTTCAGACTGGGC...GTCAGTTTGTGAATCTTCAGCTAAACAATAACAGCCACAGCAAGGGATAGAACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048216.6 ENSMUST00000139793.8 |
||
| 3UTR TCA 72 bp | GAGATGTTCTACATCCTTAAACATAGTTGTCTCTGCTaGAGTGAAGAACTCTCTCTAGGAGAGCAAGTTAGT | + |
|
Preference number: 3 (lower is better) Translates to: EMFYILKHSCLC*SEELSLGEQVS Trigger: ACTAACTTGCTCTCCTAGAGAGAGTTCTTCACTTCAGCAGAGACAACTATGTTTAAGGATGTAGAACATCTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048216.6 ENSMUST00000139793.8 |
||
| 3UTR CCA 72 bp | ATATCAAGCACTCTTAAGAAGCCCAGTCTGAAAATTTaGAAAGTTACAGGATCATCAGAATGGAGTGCTGAG | + |
|
Preference number: 3 (lower is better) Translates to: ISSTLKKPSLKI*KVTGSSEWSAE Trigger: CTCAGCACTCCATTCTGATGATCCTGTAACTTTCCAAATTTTCAGACTGGGCTTCTTAAGAGTGCTTGATAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048216.6 ENSMUST00000139793.8 |
||
| 3UTR TCA 72 bp | GAAAGTATGGCAATAACAAAATTATGGCTCAGATTATaGAGCTGGACTAACTTACTTCATACTGAATGCTCC | + |
|
Preference number: 3 (lower is better) Translates to: ESMAITKLWLRL*SWTNLLHTECS Trigger: GGAGCATTCAGTATGAAGTAAGTTAGTCCAGCTTCATAATCTGAGCCATAATTTTGTTATTGCCATACTTTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048216.6 ENSMUST00000139793.8 |
||
| CDS-3UTR CCA 90 bp | GAAGGGCTCAAGCACAGCTACCTGGTGAGGACTGTGGGAAAGGACCTGGCAGGTGCGTTTGGTAACCTGTaGCCTATGTTGCCGGCATTT | + |
|
Preference number: 4 (lower is better) Translates to: EGLKHSYLVRTVGKDLAGAFGNL*PMLPAF Trigger: AAATGCCGGCAACATAGGCCACAGGTTACCAAACGC...ACCTGCCAGGTCCTTTCCCACAGTCCTCACCAGGTAGCTGTGCTTGAGCCCTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048216.6 ENSMUST00000139793.8 |
||
| CDS-3UTR TCA 90 bp | GAAGGGCTCAAGCACAGCTACCTGGTGAGGACTGTGGGAAAGGACCTGGCAGGTCTCCACCATGATGGCTaGAATCCTGTGAGAATTCTC | + |
|
Preference number: 4 (lower is better) Translates to: EGLKHSYLVRTVGKDLAGLHHDG*NPVRIL Trigger: GAGAATTCTCACAGGATTTCAGCCATCATGGTGGAG...ACCTGCCAGGTCCTTTCCCACAGTCCTCACCAGGTAGCTGTGCTTGAGCCCTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048216.6 ENSMUST00000139793.8 |
||
| CDS-3UTR TCA 90 bp | GAAGGGCTCAAGCACAGCTACCTGGTGAGGACTGTGGGAAAGGACCTGGCAGGTATGTGTTCTCCACCATaGTGGCTGAAATCCTGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: EGLKHSYLVRTVGKDLAGMCSPP*WLKSCE Trigger: CTCACAGGATTTCAGCCATCATGGTGGAGAACACAT...ACCTGCCAGGTCCTTTCCCACAGTCCTCACCAGGTAGCTGTGCTTGAGCCCTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048216.6 ENSMUST00000139793.8 |
||
| CDS-3UTR CCA 90 bp | GAAGGGCTCAAGCACAGCTACCTGGTGAGGACTGTGGGAAAGGACCTGGCAGGTAGAAGATGGCTGTTCTaGAAAGTAGAGCAAGACATC | + |
|
Preference number: 4 (lower is better) Translates to: EGLKHSYLVRTVGKDLAGRRWLF*KVEQDI Trigger: GATGTCTTGCTCTACTTTCCAGAACAGCCATCTTCT...ACCTGCCAGGTCCTTTCCCACAGTCCTCACCAGGTAGCTGTGCTTGAGCCCTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048216.6 ENSMUST00000139793.8 |
||
| CDS-3UTR GCA 90 bp | CTGCCTAACACACAAGGCAGCAGCACTTCCGATGACGGGGAGCGAGGTGCATATAGAATGAAAATAGAGTaGTGGCCATGTGTGGTATGC | + |
|
Preference number: 4 (lower is better) Translates to: LPNTQGSSTSDDGERGAYRMKIE*WPCVVC Trigger: GCATACCACACATGGCCAGCACTCTATTTTCATTCT...ATATGCACCTCGCTCCCCGTCATCGGAAGTGCTGCTGCCTTGTGTGTTAGGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048216.6 ENSMUST00000139793.8 |
||
| CDS-3UTR GCA 90 bp | GAAGGGCTCAAGCACAGCTACCTGGTGAGGACTGTGGGAAAGGACCTGGCAGGTACAAAAGTAAGACAATaGCTCCATACAGATGAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: EGLKHSYLVRTVGKDLAGTKVRQ*LHTDEK Trigger: CTTTTCATCTGTATGGAGGCATTGTCTTACTTTTGT...ACCTGCCAGGTCCTTTCCCACAGTCCTCACCAGGTAGCTGTGCTTGAGCCCTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048216.6 ENSMUST00000139793.8 |
||
| CDS-3UTR CCA 90 bp | CGCAGCAGCACTTGCTTGCTAACCGTGATTGTCCCAATAATCACTAAAGGAAAGCATGGGGAATACCCGTaGGCATGGGAACATAAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: RSSTCLLTVIVPIITKGKHGEYP*AWEHKG Trigger: GCCTTTATGTTCCCATGCCCACGGGTATTCCCCATG...CTTTCCTTTAGTGATTATTGGGACAATCACGGTTAGCAAGCAAGTGCTGCTGCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048216.6 ENSMUST00000139793.8 |
||
| 3UTR CAA 72 bp | CCTTCTAGGTACTGGGACTTCATTCAGATGAAAGGATaGCATAAGGCCGTGTGCACACGTGCTGAGTTATCC | + |
|
Preference number: 4 (lower is better) Translates to: PSRYWDFIQMKG*HKAVCTRAELS Trigger: GGATAACTCAGCACGTGTGCACACGGCCTTATGCAATCCTTTCATCTGAATGAAGTCCCAGTACCTAGAAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048216.6 ENSMUST00000139793.8 |
||
| CDS-3UTR TCA 90 bp | CGCAGCAGCACTTGCTTGCTAACCGTGATTGTCCCAATAATCACTAAAGGAAAGATTGTTCTAGTGCAGTaGAGTAGCCTTGGCACTGCC | + |
|
Preference number: 4 (lower is better) Translates to: RSSTCLLTVIVPIITKGKIVLVQ*SSLGTA Trigger: GGCAGTGCCAAGGCTACTTCACTGCACTAGAACAAT...CTTTCCTTTAGTGATTATTGGGACAATCACGGTTAGCAAGCAAGTGCTGCTGCG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048216.6 ENSMUST00000139793.8 |
||
| CDS-3UTR GCA 90 bp | GGGTCTATCACGGCCCTCAAAAGTTTGAGTTGGTTTTCTATCCCTACTCATCTAAAGGTAACAGAGAGATaGGGCAGAGAGCCCAAGACC | + |
|
Preference number: 4 (lower is better) Translates to: GSITALKSLSWFSIPTHLKVTER*GREPKT Trigger: GGTCTTGGGCTCTCTGCCGCATCTCTCTGTTACCTT...TAGATGAGTAGGGATAGAAAACCAACTCAAACTTTTGAGGGCCGTGATAGACCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048216.6 ENSMUST00000139793.8 |
||
| CDS-3UTR GCA 90 bp | CGCAGCAGCACTTGCTTGCTAACCGTGATTGTCCCAATAATCACTAAAGGAAAGTGCCATGTGTCGTTGTaGGTCCCATCTGGGAAAATG | + |
|
Preference number: 4 (lower is better) Translates to: RSSTCLLTVIVPIITKGKCHVSL*VPSGKM Trigger: CATTTTCCCAGATGGGACGCACAACGACACATGGCA...CTTTCCTTTAGTGATTATTGGGACAATCACGGTTAGCAAGCAAGTGCTGCTGCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048216.6 ENSMUST00000139793.8 |
||
| CDS-3UTR TCA 90 bp | TCAGCTAGTTCTATCCCTTGCTGTGGCTGTTATTGTTTAGCTGAAGATTCACAATTCTCAGAAGCCAAGTaGATGGCCACTGCTCCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: SASSIPCCGCYCLAEDSQFSEAK*MATAPP Trigger: GGGAGGAGCAGTGGCCATTCACTTGGCTTCTGAGAA...TTGTGAATCTTCAGCTAAACAATAACAGCCACAGCAAGGGATAGAACTAGCTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048216.6 ENSMUST00000139793.8 |
||
| CDS-3UTR GCA 90 bp | CAGTATGAACACACACCCAGAAAAGACATCATTCTCCACACATTGAAACCCAAGAAGGTAACAGAGAGATaGGGCAGAGAGCCCAAGACC | + |
|
Preference number: 4 (lower is better) Translates to: QYEHTPRKDIILHTLKPKKVTER*GREPKT Trigger: GGTCTTGGGCTCTCTGCCGCATCTCTCTGTTACCTT...CTTGGGTTTCAATGTGTGGAGAATGATGTCTTTTCTGGGTGTGTGTTCATACTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048216.6 ENSMUST00000139793.8 |
||
| CDS-3UTR CCA 90 bp | CAGTATGAACACACACCCAGAAAAGACATCATTCTCCACACATTGAAACCCAAGGAATACCCGTGGGCATaGGAACATAAAGGCGGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: QYEHTPRKDIILHTLKPKEYPWA*EHKGGK Trigger: CTTCCCGCCTTTATGTTCCCATGCCCACGGGTATTC...CTTGGGTTTCAATGTGTGGAGAATGATGTCTTTTCTGGGTGTGTGTTCATACTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048216.6 ENSMUST00000139793.8 |
||
| CDS-3UTR TCA 90 bp | GGGTCTATCACGGCCCTCAAAAGTTTGAGTTGGTTTTCTATCCCTACTCATCTAGCACAAGATTCACTCTaGGGTTCACCAGCATTAGCA | + |
|
Preference number: 4 (lower is better) Translates to: GSITALKSLSWFSIPTHLAQDSL*GSPALA Trigger: TGCTAATGCTGGTGAACCTCAGAGTGAATCTTGTGC...TAGATGAGTAGGGATAGAAAACCAACTCAAACTTTTGAGGGCCGTGATAGACCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048216.6 ENSMUST00000139793.8 |
||
| CDS-3UTR TCA 90 bp | GGGTCTATCACGGCCCTCAAAAGTTTGAGTTGGTTTTCTATCCCTACTCATCTAATGTGTTCTCCACCATaGTGGCTGAAATCCTGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: GSITALKSLSWFSIPTHLMCSPP*WLKSCE Trigger: CTCACAGGATTTCAGCCATCATGGTGGAGAACACAT...TAGATGAGTAGGGATAGAAAACCAACTCAAACTTTTGAGGGCCGTGATAGACCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048216.6 ENSMUST00000139793.8 |
||
| CDS-3UTR TCA 90 bp | CAGTATGAACACACACCCAGAAAAGACATCATTCTCCACACATTGAAACCCAAGATTGTTCTAGTGCAGTaGAGTAGCCTTGGCACTGCC | + |
|
Preference number: 4 (lower is better) Translates to: QYEHTPRKDIILHTLKPKIVLVQ*SSLGTA Trigger: GGCAGTGCCAAGGCTACTTCACTGCACTAGAACAAT...CTTGGGTTTCAATGTGTGGAGAATGATGTCTTTTCTGGGTGTGTGTTCATACTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048216.6 ENSMUST00000139793.8 |
||
| CDS-3UTR GCA 90 bp | ATAGGAAAAAGGCTTGAGGGAGAGAGTATCAGAGGGCTCAAGTATGTAATGATGTGCCATGTGTCGTTGTaGGTCCCATCTGGGAAAATG | + |
|
Preference number: 4 (lower is better) Translates to: IGKRLEGESIRGLKYVMMCHVSL*VPSGKM Trigger: CATTTTCCCAGATGGGACGCACAACGACACATGGCA...CATCATTACATACTTGAGCCCTCTGATACTCTCTCCCTCAAGCCTTTTTCCTAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048216.6 ENSMUST00000139793.8 |
||
| CDS-3UTR CCA 90 bp | AGTTCTATCCCTTGCTGTGGCTGTTATTGTTTAGCTGAAGATTCACAAACTGACGAATACCCGTGGGCATaGGAACATAAAGGCGGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: SSIPCCGCYCLAEDSQTDEYPWA*EHKGGK Trigger: CTTCCCGCCTTTATGTTCCCATGCCCACGGGTATTC...GTCAGTTTGTGAATCTTCAGCTAAACAATAACAGCCACAGCAAGGGATAGAACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048216.6 ENSMUST00000139793.8 |
||
| CDS-3UTR CCA 90 bp | AGTTCTATCCCTTGCTGTGGCTGTTATTGTTTAGCTGAAGATTCACAAACTGACGCGTTTGGTAACCTGTaGCCTATGTTGCCGGCATTT | + |
|
Preference number: 4 (lower is better) Translates to: SSIPCCGCYCLAEDSQTDAFGNL*PMLPAF Trigger: AAATGCCGGCAACATAGGCCACAGGTTACCAAACGC...GTCAGTTTGTGAATCTTCAGCTAAACAATAACAGCCACAGCAAGGGATAGAACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048216.6 ENSMUST00000139793.8 |
||
| 3UTR CAA 72 bp | GGCAGCTCAAGTCTACATTCTGGCTGTTGCTACATATaGCCCTTTCGGCAGATTAGTATTCAGGATAGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: GSSSLHSGCCYI*PFRQISIQDSH Trigger: ATGACTATCCTGAATACTAATCTGCCGAAAGGGCAATATGTAGCAACAGCCAGAATGTAGACTTGAGCTGCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048216.6 ENSMUST00000139793.8 |
||
| CDS-3UTR TCA 90 bp | TCAGCTAGTTCTATCCCTTGCTGTGGCTGTTATTGTTTAGCTGAAGATTCACAAGCACAAGATTCACTCTaGGGTTCACCAGCATTAGCA | + |
|
Preference number: 4 (lower is better) Translates to: SASSIPCCGCYCLAEDSQAQDSL*GSPALA Trigger: TGCTAATGCTGGTGAACCTCAGAGTGAATCTTGTGC...TTGTGAATCTTCAGCTAAACAATAACAGCCACAGCAAGGGATAGAACTAGCTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048216.6 ENSMUST00000139793.8 |
||
| CDS-3UTR TCA 90 bp | AGTTCTATCCCTTGCTGTGGCTGTTATTGTTTAGCTGAAGATTCACAAACTGACCTCCACCATGATGGCTaGAATCCTGTGAGAATTCTC | + |
|
Preference number: 4 (lower is better) Translates to: SSIPCCGCYCLAEDSQTDLHHDG*NPVRIL Trigger: GAGAATTCTCACAGGATTTCAGCCATCATGGTGGAG...GTCAGTTTGTGAATCTTCAGCTAAACAATAACAGCCACAGCAAGGGATAGAACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048216.6 ENSMUST00000139793.8 |
||
| CDS-3UTR TCA 90 bp | ATAGGAAAAAGGCTTGAGGGAGAGAGTATCAGAGGGCTCAAGTATGTAATGATGATGTCTTCGGGAGAATaGCTCTTGATCACTTCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: IGKRLEGESIRGLKYVMMMSSGE*LLITSL Trigger: CAAGGAAGTGATCAAGAGTCATTCTCCCGAAGACAT...CATCATTACATACTTGAGCCCTCTGATACTCTCTCCCTCAAGCCTTTTTCCTAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048216.6 ENSMUST00000139793.8 |
||
| CDS-3UTR CCA 90 bp | CAGTATGAACACACACCCAGAAAAGACATCATTCTCCACACATTGAAACCCAAGCAAAAAGGAAAACCTTaGTCTTATCGAGGTCGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: QYEHTPRKDIILHTLKPKQKGKP*SYRGRV Trigger: GACCCGACCTCGATAAGACCAAGGTTTTCCTTTTTG...CTTGGGTTTCAATGTGTGGAGAATGATGTCTTTTCTGGGTGTGTGTTCATACTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000048216.6 ENSMUST00000139793.8 |
||
| CDS-3UTR TCA 90 bp | AGTTCTATCCCTTGCTGTGGCTGTTATTGTTTAGCTGAAGATTCACAAACTGACATGTCTTCGGGAGAATaGCTCTTGATCACTTCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: SSIPCCGCYCLAEDSQTDMSSGE*LLITSL Trigger: CAAGGAAGTGATCAAGAGTCATTCTCCCGAAGACAT...GTCAGTTTGTGAATCTTCAGCTAAACAATAACAGCCACAGCAAGGGATAGAACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048216.6 ENSMUST00000139793.8 |
||
| CDS-3UTR GCA 90 bp | ATAGGAAAAAGGCTTGAGGGAGAGAGTATCAGAGGGCTCAAGTATGTAATGATGAGAATGAAAATAGAGTaGTGGCCATGTGTGGTATGC | + |
|
Preference number: 4 (lower is better) Translates to: IGKRLEGESIRGLKYVMMRMKIE*WPCVVC Trigger: GCATACCACACATGGCCAGCACTCTATTTTCATTCT...CATCATTACATACTTGAGCCCTCTGATACTCTCTCCCTCAAGCCTTTTTCCTAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048216.6 ENSMUST00000139793.8 |
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| CDS-3UTR CCA 90 bp | ATAGGAAAAAGGCTTGAGGGAGAGAGTATCAGAGGGCTCAAGTATGTAATGATGATGAAAATGTTTTCATaGGGAATACCCGTGGGCATG | + |
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Preference number: 4 (lower is better) Translates to: IGKRLEGESIRGLKYVMMMKMFS*GIPVGM Trigger: CATGCCCACGGGTATTCCCCATGAAAACATTTTCAT...CATCATTACATACTTGAGCCCTCTGATACTCTCTCCCTCAAGCCTTTTTCCTAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000048216.6 ENSMUST00000139793.8 |
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| CDS-3UTR CCA 90 bp | CAGTATGAACACACACCCAGAAAAGACATCATTCTCCACACATTGAAACCCAAGCATGGAAATAAATTATaGTCGGGCAGTAGGGGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: QYEHTPRKDIILHTLKPKHGNKL*SGSRGN Trigger: ATTCCCCCTACTGCCCGACCATAATTTATTTCCATG...CTTGGGTTTCAATGTGTGGAGAATGATGTCTTTTCTGGGTGTGTGTTCATACTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048216.6 ENSMUST00000139793.8 |
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| CDS-3UTR CCA 90 bp | TCAGCTAGTTCTATCCCTTGCTGTGGCTGTTATTGTTTAGCTGAAGATTCACAACAAAAAGGAAAACCTTaGTCTTATCGAGGTCGGGTC | + |
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Preference number: 4 (lower is better) Translates to: SASSIPCCGCYCLAEDSQQKGKP*SYRGRV Trigger: GACCCGACCTCGATAAGACCAAGGTTTTCCTTTTTG...TTGTGAATCTTCAGCTAAACAATAACAGCCACAGCAAGGGATAGAACTAGCTGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048216.6 ENSMUST00000139793.8 |
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| CDS-3UTR CCA 90 bp | GGGTCTATCACGGCCCTCAAAAGTTTGAGTTGGTTTTCTATCCCTACTCATCTAATGAAAATAGAGTGCTaGCCATGTGTGGTATGCTTA | + |
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Preference number: 4 (lower is better) Translates to: GSITALKSLSWFSIPTHLMKIEC*PCVVCL Trigger: TAAGCATACCACACATGGCCAGCACTCTATTTTCAT...TAGATGAGTAGGGATAGAAAACCAACTCAAACTTTTGAGGGCCGTGATAGACCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000048216.6 ENSMUST00000139793.8 |
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| CDS-3UTR CCA 90 bp | TCAGCTAGTTCTATCCCTTGCTGTGGCTGTTATTGTTTAGCTGAAGATTCACAAAGAAGATGGCTGTTCTaGAAAGTAGAGCAAGACATC | + |
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Preference number: 4 (lower is better) Translates to: SASSIPCCGCYCLAEDSQRRWLF*KVEQDI Trigger: GATGTCTTGCTCTACTTTCCAGAACAGCCATCTTCT...TTGTGAATCTTCAGCTAAACAATAACAGCCACAGCAAGGGATAGAACTAGCTGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048216.6 ENSMUST00000139793.8 |
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| CDS-3UTR CCA 90 bp | AGTTCTATCCCTTGCTGTGGCTGTTATTGTTTAGCTGAAGATTCACAAACTGACATGAAAATGTTTTCATaGGGAATACCCGTGGGCATG | + |
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Preference number: 4 (lower is better) Translates to: SSIPCCGCYCLAEDSQTDMKMFS*GIPVGM Trigger: CATGCCCACGGGTATTCCCCATGAAAACATTTTCAT...GTCAGTTTGTGAATCTTCAGCTAAACAATAACAGCCACAGCAAGGGATAGAACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048216.6 ENSMUST00000139793.8 |
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| CDS-3UTR GCA 90 bp | CAGTATGAACACACACCCAGAAAAGACATCATTCTCCACACATTGAAACCCAAGACAAAAGTAAGACAATaGCTCCATACAGATGAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: QYEHTPRKDIILHTLKPKTKVRQ*LHTDEK Trigger: CTTTTCATCTGTATGGAGGCATTGTCTTACTTTTGT...CTTGGGTTTCAATGTGTGGAGAATGATGTCTTTTCTGGGTGTGTGTTCATACTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000048216.6 ENSMUST00000139793.8 |
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| CDS-3UTR GCA 90 bp | ATGAGAATATCAAGCACTCTTAAGAAGCCCAGTCTGAAAATTTGGAAAGTTACATGGCCATGTGTGGTATaGTTAGGAATGTGTTCTCCA | + |
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Preference number: 4 (lower is better) Translates to: MRISSTLKKPSLKIWKVTWPCVV*LGMCSP Trigger: TGGAGAACACATTCCTAAGCATACCACACATGGCCA...TGTAACTTTCCAAATTTTCAGACTGGGCTTCTTAAGAGTGCTTGATATTCTCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048216.6 ENSMUST00000139793.8 |
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| CDS-3UTR CCA 90 bp | ATGAGAATATCAAGCACTCTTAAGAAGCCCAGTCTGAAAATTTGGAAAGTTACACATGGAAATAAATTATaGTCGGGCAGTAGGGGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: MRISSTLKKPSLKIWKVTHGNKL*SGSRGN Trigger: ATTCCCCCTACTGCCCGACCATAATTTATTTCCATG...TGTAACTTTCCAAATTTTCAGACTGGGCTTCTTAAGAGTGCTTGATATTCTCAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048216.6 ENSMUST00000139793.8 |
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| CDS-3UTR CAA 90 bp | GAAGGGCTCAAGCACAGCTACCTGGTGAGGACTGTGGGAAAGGACCTGGCAGGTAACCTGTGGCCTATGTaGCCGGCATTTCCATGGAAA | + |
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Preference number: 5 (lower is better) Translates to: EGLKHSYLVRTVGKDLAGNLWPM*PAFPWK Trigger: TTTCCATGGAAATGCCGGCAACATAGGCCACAGGTT...ACCTGCCAGGTCCTTTCCCACAGTCCTCACCAGGTAGCTGTGCTTGAGCCCTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048216.6 ENSMUST00000139793.8 |
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| CDS GCA 90 bp | TGCCTCCATACAGATGAAAAGTCACTATCAAAGGTAACAGAGAGATaGGGCAGAGAGCCCAAGACCAGGACGCCAAGGCCAGTAGCCATC | + |
|
Preference number: 5 (lower is better) Translates to: CLHTDEKSLSKVTER*GREPKTRTPRPVAI Trigger: GATGGCTACTGGCCTTGGCGTCCTGGTCTTGGGCTCTCTGCCGCATCTCTCTGTTACCTTTGATAGTGACTTTTCATCTGTATGGAGGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048216.6 ENSMUST00000139793.8 |
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| CDS CCA 90 bp | CATAGTCTAGCACAGCTTCAGAATCCAAATACAGCCCTTCTTCACTaGCCTCTCCTTCGCTCTTCCCGTACCCCCGGTAATCCACAAGCA | + |
|
Preference number: 5 (lower is better) Translates to: HSLAQLQNPNTALLH*PLLRSSRTPGNPQA Trigger: TGCTTGTGGATTACCGGGGGTACGGGAAGAGCGAAGGAGAGGCCAGTGAAGAAGGGCTGTATTTGGATTCTGAAGCTGTGCTAGACTATG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048216.6 ENSMUST00000139793.8 |
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| CDS GCA 90 bp | GGTTCACCAGCATTAGCAGTGCGTTTGGTAACCTGTGGCCTATGTTaGCGGCATTTCCATGGAAATAAATTATGGTCGGGCAGTAGGGGG | + |
|
Preference number: 5 (lower is better) Translates to: GSPALAVRLVTCGLC*RHFHGNKLWSGSRG Trigger: CCCCCTACTGCCCGACCATAATTTATTTCCATGGAAATGCCGGCAACATAGGCCACAGGTTACCAAACGCACTGCTAATGCTGGTGAACC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048216.6 ENSMUST00000139793.8 |
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| CDS TCA 90 bp | GTTTCATCATCACGGGTGGAATCAACTGGTCAGAGAGGCCAGAGATaGAGAGAGAAGGCATCCTGCACTGGGAGATCTTTCTGTAGGACA | + |
|
Preference number: 5 (lower is better) Translates to: VSSSRVESTGQRGQR*REKASCTGRSFCRT Trigger: TGTCCTACAGAAAGATCTCCCAGTGCAGGATGCCTTCTCTCTTCATCTCTGGCCTCTCTGACCAGTTGATTCCACCCGTGATGATGAAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048216.6 ENSMUST00000139793.8 |
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| CDS-3UTR CAA 90 bp | CTGCCTAACACACAAGGCAGCAGCACTTCCGATGACGGGGAGCGAGGTGCATATAAGGAAGGTAACGCATaGGGAAGAATGAAAATAGAG | + |
|
Preference number: 5 (lower is better) Translates to: LPNTQGSSTSDDGERGAYKEGNA*GRMKIE Trigger: CTCTATTTTCATTCTTCCCAATGCGTTACCTTCCTT...ATATGCACCTCGCTCCCCGTCATCGGAAGTGCTGCTGCCTTGTGTGTTAGGCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048216.6 ENSMUST00000139793.8 |
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| CDS-3UTR CAA 90 bp | CGCAGCAGCACTTGCTTGCTAACCGTGATTGTCCCAATAATCACTAAAGGAAAGCACTGCCATGTGTCGTaGTGCGTCCCATCTGGGAAA | + |
|
Preference number: 5 (lower is better) Translates to: RSSTCLLTVIVPIITKGKHCHVS*CVPSGK Trigger: TTTCCCAGATGGGACGCACAACGACACATGGCAGTG...CTTTCCTTTAGTGATTATTGGGACAATCACGGTTAGCAAGCAAGTGCTGCTGCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048216.6 ENSMUST00000139793.8 |
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| CDS-3UTR CAA 90 bp | CTGCCTAACACACAAGGCAGCAGCACTTCCGATGACGGGGAGCGAGGTGCATATCTCTTGATCACTTCCTaGATAAATTGTTCTAGTGCA | + |
|
Preference number: 5 (lower is better) Translates to: LPNTQGSSTSDDGERGAYLLITS*INCSSA Trigger: TGCACTAGAACAATTTATCAAGGAAGTGATCAAGAG...ATATGCACCTCGCTCCCCGTCATCGGAAGTGCTGCTGCCTTGTGTGTTAGGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048216.6 ENSMUST00000139793.8 |
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| CDS CCA 90 bp | GTAACCTGTGGCCTATGTTGCCGGCATTTCCATGGAAATAAATTATaGTCGGGCAGTAGGGGGAATTGTCTCCAGTGTATCTCACCAAGA | + |
|
Preference number: 5 (lower is better) Translates to: VTCGLCCRHFHGNKL*SGSRGNCLQCISPR Trigger: TCTTGGTGAGATACACTGGAGACAATTCCCCCTACTGCCCGACCATAATTTATTTCCATGGAAATGCCGGCAACATAGGCCACAGGTTAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048216.6 ENSMUST00000139793.8 |
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| CDS-3UTR CAA 90 bp | ATAGGAAAAAGGCTTGAGGGAGAGAGTATCAGAGGGCTCAAGTATGTAATGATGCACTGCCATGTGTCGTaGTGCGTCCCATCTGGGAAA | + |
|
Preference number: 5 (lower is better) Translates to: IGKRLEGESIRGLKYVMMHCHVS*CVPSGK Trigger: TTTCCCAGATGGGACGCACAACGACACATGGCAGTG...CATCATTACATACTTGAGCCCTCTGATACTCTCTCCCTCAAGCCTTTTTCCTAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048216.6 ENSMUST00000139793.8 |
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| CDS TCA 90 bp | GGCCAAAAAGGAAAACCTTGGTCTTATCGAGGTCGGGTCTCGTCATaGCATAGTCTAGCACAGCTTCAGAATCCAAATACAGCCCTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: GQKGKPWSYRGRVSS*HSLAQLQNPNTALL Trigger: AAGAAGGGCTGTATTTGGATTCTGAAGCTGTGCTAGACTATGTCATGACGAGACCCGACCTCGATAAGACCAAGGTTTTCCTTTTTGGCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048216.6 ENSMUST00000139793.8 |
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| CDS-3UTR CAA 90 bp | TCAGCTAGTTCTATCCCTTGCTGTGGCTGTTATTGTTTAGCTGAAGATTCACAATGCAGTGAAGTAGCCTaGGCACTGCCATGTGTCGTT | + |
|
Preference number: 5 (lower is better) Translates to: SASSIPCCGCYCLAEDSQCSEVA*ALPCVV Trigger: AACGACACATGGCAGTGCCAAGGCTACTTCACTGCA...TTGTGAATCTTCAGCTAAACAATAACAGCCACAGCAAGGGATAGAACTAGCTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048216.6 ENSMUST00000139793.8 |
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| CDS-3UTR CAA 90 bp | AGTTCTATCCCTTGCTGTGGCTGTTATTGTTTAGCTGAAGATTCACAAACTGACAACCTGTGGCCTATGTaGCCGGCATTTCCATGGAAA | + |
|
Preference number: 5 (lower is better) Translates to: SSIPCCGCYCLAEDSQTDNLWPM*PAFPWK Trigger: TTTCCATGGAAATGCCGGCAACATAGGCCACAGGTT...GTCAGTTTGTGAATCTTCAGCTAAACAATAACAGCCACAGCAAGGGATAGAACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048216.6 ENSMUST00000139793.8 |
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| CDS-3UTR CAA 90 bp | CAGTATGAACACACACCCAGAAAAGACATCATTCTCCACACATTGAAACCCAAGCCAAAAAGGAAAACCTaGGTCTTATCGAGGTCGGGT | + |
|
Preference number: 5 (lower is better) Translates to: QYEHTPRKDIILHTLKPKPKRKT*VLSRSG Trigger: ACCCGACCTCGATAAGACCAAGGTTTTCCTTTTTGG...CTTGGGTTTCAATGTGTGGAGAATGATGTCTTTTCTGGGTGTGTGTTCATACTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000048216.6 ENSMUST00000139793.8 |
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| CDS-3UTR CAA 90 bp | CGCAGCAGCACTTGCTTGCTAACCGTGATTGTCCCAATAATCACTAAAGGAAAGAAGGAAGGTAACGCATaGGGAAGAATGAAAATAGAG | + |
|
Preference number: 5 (lower is better) Translates to: RSSTCLLTVIVPIITKGKKEGNA*GRMKIE Trigger: CTCTATTTTCATTCTTCCCAATGCGTTACCTTCCTT...CTTTCCTTTAGTGATTATTGGGACAATCACGGTTAGCAAGCAAGTGCTGCTGCG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048216.6 ENSMUST00000139793.8 |
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| CDS-3UTR CAA 90 bp | CGCAGCAGCACTTGCTTGCTAACCGTGATTGTCCCAATAATCACTAAAGGAAAGCAGATGATGGTGACATaGGATGATGTTTTTGTCATG | + |
|
Preference number: 5 (lower is better) Translates to: RSSTCLLTVIVPIITKGKQMMVT*DDVFVM Trigger: CATGACAAAAACATCATCCAATGTCACCATCATCTG...CTTTCCTTTAGTGATTATTGGGACAATCACGGTTAGCAAGCAAGTGCTGCTGCG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048216.6 ENSMUST00000139793.8 |
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| CDS-3UTR CAA 90 bp | ATGAGAATATCAAGCACTCTTAAGAAGCCCAGTCTGAAAATTTGGAAAGTTACATGCAGTGAAGTAGCCTaGGCACTGCCATGTGTCGTT | + |
|
Preference number: 5 (lower is better) Translates to: MRISSTLKKPSLKIWKVTCSEVA*ALPCVV Trigger: AACGACACATGGCAGTGCCAAGGCTACTTCACTGCA...TGTAACTTTCCAAATTTTCAGACTGGGCTTCTTAAGAGTGCTTGATATTCTCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048216.6 ENSMUST00000139793.8 |
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| CDS-3UTR CAA 90 bp | AGTTCTATCCCTTGCTGTGGCTGTTATTGTTTAGCTGAAGATTCACAAACTGACAGGCGCACTCCATCTTaGGTTCTGATGAAAATGTTT | + |
|
Preference number: 5 (lower is better) Translates to: SSIPCCGCYCLAEDSQTDRRTPS*VLMKMF Trigger: AAACATTTTCATCAGAACCAAAGATGGAGTGCGCCT...GTCAGTTTGTGAATCTTCAGCTAAACAATAACAGCCACAGCAAGGGATAGAACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048216.6 ENSMUST00000139793.8 |
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| CDS-3UTR CAA 90 bp | CAGTATGAACACACACCCAGAAAAGACATCATTCTCCACACATTGAAACCCAAGCAGATGATGGTGACATaGGATGATGTTTTTGTCATG | + |
|
Preference number: 5 (lower is better) Translates to: QYEHTPRKDIILHTLKPKQMMVT*DDVFVM Trigger: CATGACAAAAACATCATCCAATGTCACCATCATCTG...CTTGGGTTTCAATGTGTGGAGAATGATGTCTTTTCTGGGTGTGTGTTCATACTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048216.6 ENSMUST00000139793.8 |
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| CDS-3UTR CAA 90 bp | CAGTATGAACACACACCCAGAAAAGACATCATTCTCCACACATTGAAACCCAAGCTCTTGATCACTTCCTaGATAAATTGTTCTAGTGCA | + |
|
Preference number: 5 (lower is better) Translates to: QYEHTPRKDIILHTLKPKLLITS*INCSSA Trigger: TGCACTAGAACAATTTATCAAGGAAGTGATCAAGAG...CTTGGGTTTCAATGTGTGGAGAATGATGTCTTTTCTGGGTGTGTGTTCATACTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048216.6 ENSMUST00000139793.8 |
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| CDS-3UTR CAA 90 bp | ATGAGAATATCAAGCACTCTTAAGAAGCCCAGTCTGAAAATTTGGAAAGTTACAAGGCGCACTCCATCTTaGGTTCTGATGAAAATGTTT | + |
|
Preference number: 5 (lower is better) Translates to: MRISSTLKKPSLKIWKVTRRTPS*VLMKMF Trigger: AAACATTTTCATCAGAACCAAAGATGGAGTGCGCCT...TGTAACTTTCCAAATTTTCAGACTGGGCTTCTTAAGAGTGCTTGATATTCTCAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048216.6 ENSMUST00000139793.8 |
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| CDS TCA 72 bp | TCACGGGTGGAATCAACTGGTCAGAGAGGCCAGAGATaGAGAGAGAAGGCATCCTGCACTGGGAGATCTTTC | + |
|
Preference number: 6 (lower is better) Translates to: SRVESTGQRGQR*REKASCTGRSF Trigger: GAAAGATCTCCCAGTGCAGGATGCCTTCTCTCTTCATCTCTGGCCTCTCTGACCAGTTGATTCCACCCGTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048216.6 ENSMUST00000139793.8 |
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| CDS GCA 72 bp | CCTGTGAGAATTCTCAGAAGCCAAGTGAATGGCCACTaGTCCTCCCAGGGAGCGGCCAAAAAGGAAAACCTT | + |
|
Preference number: 6 (lower is better) Translates to: PVRILRSQVNGH*SSQGAAKKENL Trigger: AAGGTTTTCCTTTTTGGCCGCTCCCTGGGAGGAGCAGTGGCCATTCACTTGGCTTCTGAGAATTCTCACAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048216.6 ENSMUST00000139793.8 |
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| CDS GCA 72 bp | GCATTAGCAGTGCGTTTGGTAACCTGTGGCCTATGTTaGCGGCATTTCCATGGAAATAAATTATGGTCGGGC | + |
|
Preference number: 6 (lower is better) Translates to: ALAVRLVTCGLC*RHFHGNKLWSG Trigger: GCCCGACCATAATTTATTTCCATGGAAATGCCGGCAACATAGGCCACAGGTTACCAAACGCACTGCTAATGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048216.6 ENSMUST00000139793.8 |
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| CDS TCA 72 bp | GGAAAACCTTGGTCTTATCGAGGTCGGGTCTCGTCATaGCATAGTCTAGCACAGCTTCAGAATCCAAATACA | + |
|
Preference number: 6 (lower is better) Translates to: GKPWSYRGRVSS*HSLAQLQNPNT Trigger: TGTATTTGGATTCTGAAGCTGTGCTAGACTATGTCATGACGAGACCCGACCTCGATAAGACCAAGGTTTTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048216.6 ENSMUST00000139793.8 |
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| CDS TCA 72 bp | CCATGTGTGGTATGCTTAGGAATGTGTTCTCCACCATaGTGGCTGAAATCCTGTGAGAATTCTCAGAAGCCA | + |
|
Preference number: 6 (lower is better) Translates to: PCVVCLGMCSPP*WLKSCENSQKP Trigger: TGGCTTCTGAGAATTCTCACAGGATTTCAGCCATCATGGTGGAGAACACATTCCTAAGCATACCACACATGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048216.6 ENSMUST00000139793.8 |
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| CDS CCA 72 bp | GAAGGTAACGCATTGGGAAGAATGAAAATAGAGTGCTaGCCATGTGTGGTATGCTTAGGAATGTGTTCTCCA | + |
|
Preference number: 6 (lower is better) Translates to: EGNALGRMKIEC*PCVVCLGMCSP Trigger: TGGAGAACACATTCCTAAGCATACCACACATGGCCAGCACTCTATTTTCATTCTTCCCAATGCGTTACCTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048216.6 ENSMUST00000139793.8 |
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| CDS GCA 72 bp | AAGGAAGGTAACGCATTGGGAAGAATGAAAATAGAGTaGTGGCCATGTGTGGTATGCTTAGGAATGTGTTCT | + |
|
Preference number: 6 (lower is better) Translates to: KEGNALGRMKIE*WPCVVCLGMCS Trigger: AGAACACATTCCTAAGCATACCACACATGGCCAGCACTCTATTTTCATTCTTCCCAATGCGTTACCTTCCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048216.6 ENSMUST00000139793.8 |
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| CDS CAA 90 bp | AGGACAGAAACTTATTTTTATAGCACCATAAAGGAAGGTAACGCATaGGGAAGAATGAAAATAGAGTGCTGGCCATGTGTGGTATGCTTA | + |
|
Preference number: 6 (lower is better) Translates to: RTETYFYSTIKEGNA*GRMKIECWPCVVCL Trigger: TAAGCATACCACACATGGCCAGCACTCTATTTTCATTCTTCCCAATGCGTTACCTTCCTTTATGGTGCTATAAAAATAAGTTTCTGTCCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048216.6 ENSMUST00000139793.8 |
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| CDS TCA 72 bp | ACATTGGATGATGTTTTTGTCATGTCTTCGGGAGAATaGCTCTTGATCACTTCCTTGATAAATTGTTCTAGT | + |
|
Preference number: 6 (lower is better) Translates to: TLDDVFVMSSGE*LLITSLINCSS Trigger: ACTAGAACAATTTATCAAGGAAGTGATCAAGAGTCATTCTCCCGAAGACATGACAAAAACATCATCCAATGT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048216.6 ENSMUST00000139793.8 |
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