Pregenerated sensors for ABHD11 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000040532Ensembl transcript IDs: ENSMUST00000046999.12, ENSMUST00000111216.8, ENSMUST00000123227.3, ENSMUST00000148831.3, ENSMUST00000149778.2, ENSMUST00000154469.8, ENSMUST00000201890.2
Found 162 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AGGCACGGTCTGAATCTGGGCTTGAGGGAAGAGTCGCCTAATCTCTaGGTGGTGGCTGGGTCTGGCCGCCATAGTGAAGCCAATGGAGAG | + |
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Preference number: 1 (lower is better) Translates to: RHGLNLGLREESPNL*VVAGSGRHSEANGE Trigger: CTCTCCATTGGCTTCACTATGGCGGCCAGACCCAGCCACCACTCAGAGATTAGGCGACTCTTCCCTCAAGCCCAGATTCAGACCGTGCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123227.3 |
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| 3UTR TCA 90 bp | TGGCTGGGAGACAGAATCAGACCAGAGCAGGTCCCAGACAAACTCTaGGCCGCCAGCAGAGTTTCTGGACCTGGCCATCCAAAGTGTGGA | + |
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Preference number: 1 (lower is better) Translates to: WLGDRIRPEQVPDKL*AASRVSGPGHPKCG Trigger: TCCACACTTTGGATGGCCAGGTCCAGAAACTCTGCTGGCGGCTCAGAGTTTGTCTGGGACCTGCTCTGGTCTGATTCTGTCTCCCAGCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000123227.3 ENSMUST00000149778.2 |
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| 3UTR GCA 90 bp | AGCAGGAACTGCCGAATGCCCGCTTCCTTGACAACCGAACTAAGCTaGTTATCCGCCAGTTTTCGGGCTTGGGAGTGCGGCACCTTCTCT | + |
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Preference number: 1 (lower is better) Translates to: SRNCRMPASLTTELS*LSASFRAWECGTFS Trigger: AGAGAAGGTGCCGCACTCCCAAGCCCGAAAACTGGCGGATAAGCAGCTTAGTTCGGTTGTCAAGGAAGCGGGCATTCGGCAGTTCCTGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000123227.3 ENSMUST00000148831.3 |
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| 3UTR TCA 90 bp | AGAGGGAGAAAGGGAGAGAGAGAGAACAGGAGAGAGAGATGTGCATaGGCCTTCATGCGCAGTGGTATTGCCAGGCTCCCAGATACCCCG | + |
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Preference number: 1 (lower is better) Translates to: RGRKGERENRRERCA*AFMRSGIARLPDTP Trigger: CGGGGTATCTGGGAGCCTGGCAATACCACTGCGCATGAAGGCTCATGCACATCTCTCTCTCCTGTTCTCTCTCTCTCCCTTTCTCCCTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123227.3 |
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| 3UTR GCA 90 bp | CAGGAGAATCGCCCACCCACCTCTACCAGGTTAGTGAGCAGGAACTaGCGAATGCCCGCTTCCTTGACAACCGAACTAAGCTGCTTATCC | + |
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Preference number: 1 (lower is better) Translates to: QENRPPTSTRLVSRN*RMPASLTTELSCLS Trigger: GGATAAGCAGCTTAGTTCGGTTGTCAAGGAAGCGGGCATTCGGCAGTTCCTGCTCACTAACCTGGTAGAGGTGGGTGGGCGATTCTCCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000123227.3 ENSMUST00000148831.3 |
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| 3UTR CCA 90 bp | CTGCTTATCCGCCAGTTTTCGGGCTTGGGAGTGCGGCACCTTCTCTaGGATCTCAACAGCCTTCATGGCTGCTATGAAGGCTCCAATGTG | + |
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Preference number: 1 (lower is better) Translates to: LLIRQFSGLGVRHLL*DLNSLHGCYEGSNV Trigger: CACATTGGAGCCTTCATAGCAGCCATGAAGGCTGTTGAGATCCCAGAGAAGGTGCCGCACTCCCAAGCCCGAAAACTGGCGGATAAGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000123227.3 ENSMUST00000148831.3 ENSMUST00000149778.2 |
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| 3UTR TCA 90 bp | AGTGCGGCACCTTCTCTGGGATCTCAACAGCCTTCATGGCTGCTATaGAGGCTCCAATGTGTGATCCAGGTGTGGTTCCTACCGGGCTTA | + |
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Preference number: 1 (lower is better) Translates to: SAAPSLGSQQPSWLL*RLQCVIQVWFLPGL Trigger: TAAGCCCGGTAGGAACCACACCTGGATCACACATTGGAGCCTTCATAGCAGCCATGAAGGCTGTTGAGATCCCAGAGAAGGTGCCGCACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000123227.3 ENSMUST00000149778.2 |
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| 3UTR CCA 90 bp | TCCTTGACAACCGAACTAAGCTGCTTATCCGCCAGTTTTCGGGCTTaGGAGTGCGGCACCTTCTCTGGGATCTCAACAGCCTTCATGGCT | + |
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Preference number: 1 (lower is better) Translates to: SLTTELSCLSASFRA*ECGTFSGISTAFMA Trigger: AGCCATGAAGGCTGTTGAGATCCCAGAGAAGGTGCCGCACTCCCAAGCCCGAAAACTGGCGGATAAGCAGCTTAGTTCGGTTGTCAAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000123227.3 ENSMUST00000148831.3 |
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| 3UTR CCA 90 bp | ACCTTGACAACCGAACTAAGCTGCTTATCCGCCAGTTTTCGGGCTTaGGAGTGCGGCACCTTCTCTGGGATCTCAACAGCCTTCATGGCT | + |
|
Preference number: 1 (lower is better) Translates to: TLTTELSCLSASFRA*ECGTFSGISTAFMA Trigger: AGCCATGAAGGCTGTTGAGATCCCAGAGAAGGTGCCGCACTCCCAAGCCCGAAAACTGGCGGATAAGCAGCTTAGTTCGGTTGTCAAGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149778.2 |
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| 3UTR TCA 90 bp | AGGCACGGTCTGAATCTGGGCTTGAGGGAAGAGTCGCCTAATCTCTaGGTGGTGGCTGGGTTGTACATATGTAGAATTTCCACCAAGCAG | + |
|
Preference number: 1 (lower is better) Translates to: RHGLNLGLREESPNL*VVAGLYICRISTKQ Trigger: CTGCTTGGTGGAAATTCTACATATGTACAACCCAGCCACCACTCAGAGATTAGGCGACTCTTCCCTCAAGCCCAGATTCAGACCGTGCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000148831.3 ENSMUST00000149778.2 |
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| 3UTR CCA 90 bp | TCCTACCGGGCTTATGTCTACAACAACCAATCGTTCCACAACATCTaGCTGGGAGACAGAATCAGACCAGAGCAGGTCCCAGACAAACTC | + |
|
Preference number: 1 (lower is better) Translates to: SYRAYVYNNQSFHNI*LGDRIRPEQVPDKL Trigger: GAGTTTGTCTGGGACCTGCTCTGGTCTGATTCTGTCTCCCAGCCAGATGTTGTGGAACGATTGGTTGTTGTAGACATAAGCCCGGTAGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000123227.3 ENSMUST00000149778.2 |
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| 3UTR-3UTR GCA 90 bp | CTCTACCAGGTTAGTGAGCAGGAACTGCCGAATGCCCGCTTCCTGTGGGGAGACCTAGAGTCCCCTGGCTaGTCTTCCAAGGAGCTACTT | + |
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Preference number: 2 (lower is better) Translates to: LYQVSEQELPNARFLWGDLESPG*SSKELL Trigger: AAGTAGCTCCTTGGAAGAGCAGCCAGGGGACTCTAG...GTCTCCCCACAGGAAGCGGGCATTCGGCAGTTCCTGCTCACTAACCTGGTAGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000149778.2 |
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| 3UTR CAA 90 bp | CACCTTGACAACCGAACTAAGCTGCTTATCCGCCAGTTTTCGGGCTaGGGAGTGCGGCACCTTCTCTGGGATCTCAACAGCCTTCATGGC | + |
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Preference number: 2 (lower is better) Translates to: HLDNRTKLLIRQFSG*GVRHLLWDLNSLHG Trigger: GCCATGAAGGCTGTTGAGATCCCAGAGAAGGTGCCGCACTCCCAAGCCCGAAAACTGGCGGATAAGCAGCTTAGTTCGGTTGTCAAGGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149778.2 |
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| 3UTR-3UTR GCA 90 bp | CGTATCCAAGTTCAGTCTCCAGGAGAATCGCCCACCCACCTCTACCAGGTTAGTTTTCGGGCTTGGGAGTaGGGCACCTTCTCTGGGATC | + |
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Preference number: 2 (lower is better) Translates to: RIQVQSPGESPTHLYQVSFRAWE*GTFSGI Trigger: GATCCCAGAGAAGGTGCCGCACTCCCAAGCCCGAAA...ACTAACCTGGTAGAGGTGGGTGGGCGATTCTCCTGGAGACTGAACTTGGATACG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000123227.3 ENSMUST00000148831.3 ENSMUST00000149778.2 |
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| 3UTR CAA 90 bp | TTCCTTGACAACCGAACTAAGCTGCTTATCCGCCAGTTTTCGGGCTaGGGAGTGCGGCACCTTCTCTGGGATCTCAACAGCCTTCATGGC | + |
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Preference number: 2 (lower is better) Translates to: FLDNRTKLLIRQFSG*GVRHLLWDLNSLHG Trigger: GCCATGAAGGCTGTTGAGATCCCAGAGAAGGTGCCGCACTCCCAAGCCCGAAAACTGGCGGATAAGCAGCTTAGTTCGGTTGTCAAGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000123227.3 ENSMUST00000148831.3 |
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| 3UTR CAA 90 bp | AGCTACTTCTTAAGCCAAGAAGCTGGTGACAGCATCCATGAAGTCTaGGGGTTTGTCGCTGTGGACCCAGTGGCCAGCGTTAGGCACGGT | + |
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Preference number: 2 (lower is better) Translates to: SYFLSQEAGDSIHEV*GFVAVDPVASVRHG Trigger: ACCGTGCCTAACGCTGGCCACTGGGTCCACAGCGACAAACCCCAAGACTTCATGGATGCTGTCACCAGCTTCTTGGCTTAAGAAGTAGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000123227.3 ENSMUST00000149778.2 |
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| 3UTR-3UTR GCA 90 bp | CCTCTCCGTGCCCCTGAGTTTTTCTGTGCAGAAGCAAGATGGCACAGATCCCAACTAGAGTCCCCTGGCTaGTCTTCCAAGGAGCTACTT | + |
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Preference number: 2 (lower is better) Translates to: PLRAPEFFCAEARWHRSQLESPG*SSKELL Trigger: AAGTAGCTCCTTGGAAGAGCAGCCAGGGGACTCTAG...TTGGGATCTGTGCCATCTTGCTTCTGCACAGAAAAACTCAGGGGCACGGAGAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000046999.12 ENSMUST00000111216.8 ENSMUST00000123227.3 ENSMUST00000149778.2 ENSMUST00000154469.8 |
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| 3UTR-3UTR TCA 90 bp | AACGTATCCAAGTTCAGTCTCCAGGAGAATCGCCCACCCACCTCTACCAGGTTACCTTCATGGCTGCTATaGAGGCTCCAATGTGTGATC | + |
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Preference number: 2 (lower is better) Translates to: NVSKFSLQENRPPTSTRLPSWLL*RLQCVI Trigger: GATCACACATTGGAGCCTTCATAGCAGCCATGAAGG...TAACCTGGTAGAGGTGGGTGGGCGATTCTCCTGGAGACTGAACTTGGATACGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000123227.3 ENSMUST00000148831.3 ENSMUST00000149778.2 |
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| 3UTR-3UTR GCA 90 bp | TACTTCTTAAGCCAAGAAGCTGGTGACAGCATCCATGAAGTCTTGGGGTTTGTCCATGCGCAGTGGTATTaGCAGGCTCCCAGATACCCC | + |
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Preference number: 2 (lower is better) Translates to: YFLSQEAGDSIHEVLGFVHAQWY*QAPRYP Trigger: GGGGTATCTGGGAGCCTGGCAATACCACTGCGCATG...GACAAACCCCAAGACTTCATGGATGCTGTCACCAGCTTCTTGGCTTAAGAAGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123227.3 |
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| 3UTR-3UTR GCA 90 bp | TACTTCTTAAGCCAAGAAGCTGGTGACAGCATCCATGAAGTCTTGGGGTTTGTCCTAGAGTCCCCTGGCTaGTCTTCCAAGGAGCTACTT | + |
|
Preference number: 2 (lower is better) Translates to: YFLSQEAGDSIHEVLGFVLESPG*SSKELL Trigger: AAGTAGCTCCTTGGAAGAGCAGCCAGGGGACTCTAG...GACAAACCCCAAGACTTCATGGATGCTGTCACCAGCTTCTTGGCTTAAGAAGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000123227.3 ENSMUST00000149778.2 |
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| 3UTR-3UTR GCA 90 bp | GAACTGTCTTTATTCATTAAAAGTGTTGGGCCACTTCTGTACTCCTGGACCCTCCTAGAGTCCCCTGGCTaGTCTTCCAAGGAGCTACTT | + |
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Preference number: 2 (lower is better) Translates to: ELSLFIKSVGPLLYSWTLLESPG*SSKELL Trigger: AAGTAGCTCCTTGGAAGAGCAGCCAGGGGACTCTAG...GAGGGTCCAGGAGTACAGAAGTGGCCCAACACTTTTAATGAATAAAGACAGTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000046999.12 ENSMUST00000123227.3 ENSMUST00000149778.2 ENSMUST00000154469.8 |
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| 3UTR-3UTR CCA 90 bp | AAGGGGAACTGTCTTTATTCATTAAAAGTGTTGGGCCACTTCTGTACTCCTGGACGCCAGCAGAGTTTCTaGACCTGGCCATCCAAAGTG | + |
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Preference number: 2 (lower is better) Translates to: KGNCLYSLKVLGHFCTPGRQQSF*TWPSKV Trigger: CACTTTGGATGGCCAGGTCCAGAAACTCTGCTGGCG...TCCAGGAGTACAGAAGTGGCCCAACACTTTTAATGAATAAAGACAGTTCCCCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000123227.3 ENSMUST00000149778.2 |
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| 3UTR CCA 72 bp | CCTCCCCTAGCCCACGCAGGCTCCCATAGCTGGTGGTaGGCAAAGCATGCCCCTTCCTATGGTCCCACACCG | + |
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Preference number: 3 (lower is better) Translates to: PPLAHAGSHSWW*AKHAPSYGPTP Trigger: CGGTGTGGGACCATAGGAAGGGGCATGCTTTGCCCACCACCAGCTATGGGAGCCTGCGTGGGCTAGGGGAGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123227.3 |
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| 3UTR GCA 72 bp | CGCCCACCCACCTCTACCAGGTTAGTGAGCAGGAACTaGCGAATGCCCGCTTCCTGTGGGGAGACCTGGCAG | + |
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Preference number: 3 (lower is better) Translates to: RPPTSTRLVSRN*RMPASCGETWQ Trigger: CTGCCAGGTCTCCCCACAGGAAGCGGGCATTCGGCAGTTCCTGCTCACTAACCTGGTAGAGGTGGGTGGGCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149778.2 |
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| 3UTR-3UTR CAA 90 bp | CACGCAGGCTCCCATAGCTGGTGGTGGGCAAAGCATGCCCCTTCCTATGGTCCCCGCCAGTTTTCGGGCTaGGGAGTGCGGCACCTTCTC | + |
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Preference number: 3 (lower is better) Translates to: HAGSHSWWWAKHAPSYGPRQFSG*GVRHLL Trigger: GAGAAGGTGCCGCACTCCCAAGCCCGAAAACTGGCG...GGGACCATAGGAAGGGGCATGCTTTGCCCACCACCAGCTATGGGAGCCTGCGTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000123227.3 |
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| 3UTR CCA 72 bp | GTTAGTGAGCAGGAACTGCCGAATGCCCGCTTCCTGTaGGGAGACCTGGCAGCTGTGAAGGGGCTCCCTGTG | + |
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Preference number: 3 (lower is better) Translates to: VSEQELPNARFL*GDLAAVKGLPV Trigger: CACAGGGAGCCCCTTCACAGCTGCCAGGTCTCCCCACAGGAAGCGGGCATTCGGCAGTTCCTGCTCACTAAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149778.2 |
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| 3UTR GCA 72 bp | AGAGAGATGTGCATGAGCCTTCATGCGCAGTGGTATTaGCAGGCTCCCAGATACCCCGCCTCCCCTAGCCCA | + |
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Preference number: 3 (lower is better) Translates to: REMCMSLHAQWY*QAPRYPASPSP Trigger: TGGGCTAGGGGAGGCGGGGTATCTGGGAGCCTGGCAATACCACTGCGCATGAAGGCTCATGCACATCTCTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123227.3 |
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| 3UTR TCA 72 bp | CTGAATCTGGGCTTGAGGGAAGAGTCGCCTAATCTCTaGGTGGTGGCTGGGTCTGGCCGCCATAGTGAAGCC | + |
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Preference number: 3 (lower is better) Translates to: LNLGLREESPNL*VVAGSGRHSEA Trigger: GGCTTCACTATGGCGGCCAGACCCAGCCACCACTCAGAGATTAGGCGACTCTTCCCTCAAGCCCAGATTCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123227.3 |
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| 3UTR GCA 72 bp | TGCCGAATGCCCGCTTCCTTGACAACCGAACTAAGCTaGTTATCCGCCAGTTTTCGGGCTTGGGAGTGCGGC | + |
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Preference number: 3 (lower is better) Translates to: CRMPASLTTELS*LSASFRAWECG Trigger: GCCGCACTCCCAAGCCCGAAAACTGGCGGATAAGCAGCTTAGTTCGGTTGTCAAGGAAGCGGGCATTCGGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000123227.3 ENSMUST00000148831.3 |
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| 3UTR GCA 72 bp | CGCCCACCCACCTCTACCAGGTTAGTGAGCAGGAACTaGCGAATGCCCGCTTCCTTGACAACCGAACTAAGC | + |
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Preference number: 3 (lower is better) Translates to: RPPTSTRLVSRN*RMPASLTTELS Trigger: GCTTAGTTCGGTTGTCAAGGAAGCGGGCATTCGGCAGTTCCTGCTCACTAACCTGGTAGAGGTGGGTGGGCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000123227.3 ENSMUST00000148831.3 |
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| 3UTR CCA 72 bp | GGTCCCAGACAAACTCTGAGCCGCCAGCAGAGTTTCTaGACCTGGCCATCCAAAGTGTGGATGAGTCCCACG | + |
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Preference number: 3 (lower is better) Translates to: GPRQTLSRQQSF*TWPSKVWMSPT Trigger: CGTGGGACTCATCCACACTTTGGATGGCCAGGTCCAGAAACTCTGCTGGCGGCTCAGAGTTTGTCTGGGACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000123227.3 ENSMUST00000149778.2 |
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| 3UTR CCA 72 bp | CGCCAGTTTTCGGGCTTGGGAGTGCGGCACCTTCTCTaGGATCTCAACAGCCTTCATGGCTGCTATGAAGGC | + |
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Preference number: 3 (lower is better) Translates to: RQFSGLGVRHLL*DLNSLHGCYEG Trigger: GCCTTCATAGCAGCCATGAAGGCTGTTGAGATCCCAGAGAAGGTGCCGCACTCCCAAGCCCGAAAACTGGCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000123227.3 ENSMUST00000148831.3 ENSMUST00000149778.2 |
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| 3UTR TCA 72 bp | GACAGAATCAGACCAGAGCAGGTCCCAGACAAACTCTaGGCCGCCAGCAGAGTTTCTGGACCTGGCCATCCA | + |
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Preference number: 3 (lower is better) Translates to: DRIRPEQVPDKL*AASRVSGPGHP Trigger: TGGATGGCCAGGTCCAGAAACTCTGCTGGCGGCTCAGAGTTTGTCTGGGACCTGCTCTGGTCTGATTCTGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000123227.3 ENSMUST00000149778.2 |
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| 3UTR GCA 72 bp | GAGAGAACAGGAGAGAGAGATGTGCATGAGCCTTCATaGGCAGTGGTATTGCCAGGCTCCCAGATACCCCGC | + |
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Preference number: 3 (lower is better) Translates to: ERTGERDVHEPS*AVVLPGSQIPR Trigger: GCGGGGTATCTGGGAGCCTGGCAATACCACTGCGCATGAAGGCTCATGCACATCTCTCTCTCCTGTTCTCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123227.3 |
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| 3UTR CCA 72 bp | ACCGAACTAAGCTGCTTATCCGCCAGTTTTCGGGCTTaGGAGTGCGGCACCTTCTCTGGGATCTCAACAGCC | + |
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Preference number: 3 (lower is better) Translates to: TELSCLSASFRA*ECGTFSGISTA Trigger: GGCTGTTGAGATCCCAGAGAAGGTGCCGCACTCCCAAGCCCGAAAACTGGCGGATAAGCAGCTTAGTTCGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000123227.3 ENSMUST00000148831.3 ENSMUST00000149778.2 |
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| 3UTR TCA 72 bp | GGCCACTTCTGTACTCCTGGACCCTCTCCGTGCCCCTaGGTTTTTCTGTGCAGAAGCAAGATGGCACAGATC | + |
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Preference number: 3 (lower is better) Translates to: GHFCTPGPSPCP*VFLCRSKMAQI Trigger: GATCTGTGCCATCTTGCTTCTGCACAGAAAAACTCAGGGGCACGGAGAGGGTCCAGGAGTACAGAAGTGGCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000046999.12 ENSMUST00000123227.3 ENSMUST00000149778.2 ENSMUST00000154469.8 |
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| 3UTR TCA 72 bp | AAGGGAGAGAGAGAGAACAGGAGAGAGAGATGTGCATaGGCCTTCATGCGCAGTGGTATTGCCAGGCTCCCA | + |
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Preference number: 3 (lower is better) Translates to: KGERENRRERCA*AFMRSGIARLP Trigger: TGGGAGCCTGGCAATACCACTGCGCATGAAGGCTCATGCACATCTCTCTCTCCTGTTCTCTCTCTCTCCCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123227.3 |
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| 3UTR GCA 72 bp | AAGATGGCACAGATCCCAAGCCTAGAGTCCCCTGGCTaGTCTTCCAAGGAGCTACTTCTTAAGCCAAGAAGC | + |
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Preference number: 3 (lower is better) Translates to: KMAQIPSLESPG*SSKELLLKPRS Trigger: GCTTCTTGGCTTAAGAAGTAGCTCCTTGGAAGAGCAGCCAGGGGACTCTAGGCTTGGGATCTGTGCCATCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000123227.3 ENSMUST00000149778.2 |
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| 3UTR TCA 72 bp | AACAGCCTTCATGGCTGCTATGAAGGCTCCAATGTGTaGTCCAGGTGTGGTTCCTACCGGGCTTATGTCTAC | + |
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Preference number: 3 (lower is better) Translates to: NSLHGCYEGSNV*SRCGSYRAYVY Trigger: GTAGACATAAGCCCGGTAGGAACCACACCTGGATCACACATTGGAGCCTTCATAGCAGCCATGAAGGCTGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000123227.3 ENSMUST00000149778.2 |
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| 3UTR TCA 72 bp | CCTTCTCTGGGATCTCAACAGCCTTCATGGCTGCTATaGAGGCTCCAATGTGTGATCCAGGTGTGGTTCCTA | + |
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Preference number: 3 (lower is better) Translates to: PSLGSQQPSWLL*RLQCVIQVWFL Trigger: TAGGAACCACACCTGGATCACACATTGGAGCCTTCATAGCAGCCATGAAGGCTGTTGAGATCCCAGAGAAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000123227.3 ENSMUST00000148831.3 ENSMUST00000149778.2 |
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| 3UTR CCA 72 bp | ATGTCTACAACAACCAATCGTTCCACAACATCTGGCTaGGAGACAGAATCAGACCAGAGCAGGTCCCAGACA | + |
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Preference number: 3 (lower is better) Translates to: MSTTTNRSTTSG*ETESDQSRSQT Trigger: TGTCTGGGACCTGCTCTGGTCTGATTCTGTCTCCCAGCCAGATGTTGTGGAACGATTGGTTGTTGTAGACAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000123227.3 ENSMUST00000149778.2 |
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| 3UTR CCA 72 bp | GCTTATGTCTACAACAACCAATCGTTCCACAACATCTaGCTGGGAGACAGAATCAGACCAGAGCAGGTCCCA | + |
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Preference number: 3 (lower is better) Translates to: AYVYNNQSFHNI*LGDRIRPEQVP Trigger: TGGGACCTGCTCTGGTCTGATTCTGTCTCCCAGCCAGATGTTGTGGAACGATTGGTTGTTGTAGACATAAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000123227.3 ENSMUST00000149778.2 |
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| 3UTR TCA 72 bp | CTGAATCTGGGCTTGAGGGAAGAGTCGCCTAATCTCTaGGTGGTGGCTGGGTTGTACATATGTAGAATTTCC | + |
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Preference number: 3 (lower is better) Translates to: LNLGLREESPNL*VVAGLYICRIS Trigger: GGAAATTCTACATATGTACAACCCAGCCACCACTCAGAGATTAGGCGACTCTTCCCTCAAGCCCAGATTCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000148831.3 ENSMUST00000149778.2 |
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| CDS-3UTR CCA 90 bp | CGGGCTTGGGAGTGCGGCACCTTCTCTGGGATCTCAACAGCCTTCATGGCTGCTGAACCGCCAAACGCCTaGGAGAGGAGGCACCGAGTA | + |
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Preference number: 4 (lower is better) Translates to: RAWECGTFSGISTAFMAAEPPNA*ERRHRV Trigger: TACTCGGTGCCTCCTCTCCCAGGCGTTTGGCGGTTC...AGCAGCCATGAAGGCTGTTGAGATCCCAGAGAAGGTGCCGCACTCCCAAGCCCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123227.3 |
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| CDS-3UTR CCA 90 bp | TCGGGCTTGGGAGTGCGGCACCTTCTCTGGGATCTCAACAGCCTTCATGGCTGCCACCAGACCCAGCTGTaGAAGGAGGCCCTGAAGGTC | + |
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Preference number: 4 (lower is better) Translates to: SGLGVRHLLWDLNSLHGCHQTQL*KEALKV Trigger: GACCTTCAGGGCCTCCTTCCACAGCTGGGTCTGGTG...GCAGCCATGAAGGCTGTTGAGATCCCAGAGAAGGTGCCGCACTCCCAAGCCCGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000123227.3 ENSMUST00000148831.3 ENSMUST00000149778.2 |
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| CDS-3UTR CCA 90 bp | GAATCGCCCACCCACCTCTACCAGGTTAGTGAGCAGGAACTGCCGAATGCCCGCTTTCCTCCCATGCTGTaGCCAACGAGGACGCAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: ESPTHLYQVSEQELPNARFPPML*PTRTQG Trigger: GCCCTGCGTCCTCGTTGGCCACAGCATGGGAGGAAA...GCGGGCATTCGGCAGTTCCTGCTCACTAACCTGGTAGAGGTGGGTGGGCGATTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000123227.3 ENSMUST00000148831.3 ENSMUST00000149778.2 |
||
| CDS-3UTR CCA 90 bp | TCGGGCTTGGGAGTGCGGCACCTTCTCTGGGATCTCAACAGCCTTCATGGCTGCTTTCCTCCCATGCTGTaGCCAACGAGGACGCAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: SGLGVRHLLWDLNSLHGCFPPML*PTRTQG Trigger: GCCCTGCGTCCTCGTTGGCCACAGCATGGGAGGAAA...GCAGCCATGAAGGCTGTTGAGATCCCAGAGAAGGTGCCGCACTCCCAAGCCCGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000123227.3 ENSMUST00000148831.3 ENSMUST00000149778.2 |
||
| CDS-3UTR CCA 90 bp | CTAAGCTGCTTATCCGCCAGTTTTCGGGCTTGGGAGTGCGGCACCTTCTCTGGGCACCAGACCCAGCTGTaGAAGGAGGCCCTGAAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: LSCLSASFRAWECGTFSGHQTQL*KEALKV Trigger: GACCTTCAGGGCCTCCTTCCACAGCTGGGTCTGGTG...CCCAGAGAAGGTGCCGCACTCCCAAGCCCGAAAACTGGCGGATAAGCAGCTTAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000123227.3 ENSMUST00000148831.3 ENSMUST00000149778.2 |
||
| CDS-3UTR GCA 90 bp | CGCCAGTTTTCGGGCTTGGGAGTGCGGCACCTTCTCTGGGATCTCAACAGCCTTCTGTCTTTCCTCCCATaGTGTGGCCAACGAGGACGC | + |
|
Preference number: 4 (lower is better) Translates to: RQFSGLGVRHLLWDLNSLLSFLP*CGQRGR Trigger: GCGTCCTCGTTGGCCACAGCATGGGAGGAAAGACAG...AAGGCTGTTGAGATCCCAGAGAAGGTGCCGCACTCCCAAGCCCGAAAACTGGCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000123227.3 ENSMUST00000148831.3 ENSMUST00000149778.2 |
||
| CDS-3UTR CCA 90 bp | AGCAAGATGGCACAGATCCCAAGCCTAGAGTCCCCTGGCTGCTCTTCCAAGGAGCTTGCGTCTGGACTGTaGGGGCTGTCACCGTGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: SKMAQIPSLESPGCSSKELASGL*GLSPWF Trigger: GAACCACGGTGACAGCCCCCACAGTCCAGACGCAAG...CTCCTTGGAAGAGCAGCCAGGGGACTCTAGGCTTGGGATCTGTGCCATCTTGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000046999.12 ENSMUST00000111216.8 ENSMUST00000123227.3 ENSMUST00000149778.2 ENSMUST00000154469.8 |
||
| CDS-3UTR CCA 90 bp | CGAACTAAGCTGCTTATCCGCCAGTTTTCGGGCTTGGGAGTGCGGCACCTTCTCCTTGCGTCTGGACTGTaGGGGCTGTCACCGTGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: RTKLLIRQFSGLGVRHLLLASGL*GLSPWF Trigger: GAACCACGGTGACAGCCCCCACAGTCCAGACGCAAG...GAGAAGGTGCCGCACTCCCAAGCCCGAAAACTGGCGGATAAGCAGCTTAGTTCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000123227.3 ENSMUST00000148831.3 ENSMUST00000149778.2 |
||
| CDS-3UTR CCA 90 bp | GTCGCTGTGGACCCAGTGGCCAGCGTTAGGCACGGTCTGAATCTGGGCTTGAGGGAAGGTCCTGACTCATaGCCTCATAGCTTGCGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: VAVDPVASVRHGLNLGLREGPDS*PHSLRL Trigger: CAGACGCAAGCTATGAGGCCATGAGTCAGGACCTTC...CCTCAAGCCCAGATTCAGACCGTGCCTAACGCTGGCCACTGGGTCCACAGCGAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000123227.3 ENSMUST00000148831.3 ENSMUST00000149778.2 |
||
| CDS-3UTR CCA 90 bp | TGCAGAAGCAAGATGGCACAGATCCCAAGCCTAGAGTCCCCTGGCTGCTCTTCCTTTCCTCCCATGCTGTaGCCAACGAGGACGCAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: CRSKMAQIPSLESPGCSSFPPML*PTRTQG Trigger: GCCCTGCGTCCTCGTTGGCCACAGCATGGGAGGAAA...GGAAGAGCAGCCAGGGGACTCTAGGCTTGGGATCTGTGCCATCTTGCTTCTGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000046999.12 ENSMUST00000111216.8 ENSMUST00000123227.3 ENSMUST00000149778.2 ENSMUST00000154469.8 |
||
| CDS-3UTR CCA 90 bp | CTCCTGGACCCTCTCCGTGCCCCTGAGTTTTTCTGTGCAGAAGCAAGATGGCACTTTCCTCCCATGCTGTaGCCAACGAGGACGCAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: LLDPLRAPEFFCAEARWHFPPML*PTRTQG Trigger: GCCCTGCGTCCTCGTTGGCCACAGCATGGGAGGAAA...GTGCCATCTTGCTTCTGCACAGAAAAACTCAGGGGCACGGAGAGGGTCCAGGAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000046999.12 ENSMUST00000111216.8 ENSMUST00000123227.3 ENSMUST00000149778.2 ENSMUST00000154469.8 |
||
| CDS-3UTR CCA 90 bp | GGGCTTGGGAGTGCGGCACCTTCTCTGGGATCTCAACAGCCTTCATGGCTGCTAGCAGTGCCAGGAGCATaGCTGTCTTTCCTCCCATGC | + |
|
Preference number: 4 (lower is better) Translates to: GLGSAAPSLGSQQPSWLLAVPGA*LSFLPC Trigger: GCATGGGAGGAAAGACAGCCATGCTCCTGGCACTGC...TAGCAGCCATGAAGGCTGTTGAGATCCCAGAGAAGGTGCCGCACTCCCAAGCCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000123227.3 ENSMUST00000148831.3 ENSMUST00000149778.2 |
||
| CDS-3UTR GCA 90 bp | CTCCTGGACCCTCTCCGTGCCCCTGAGTTTTTCTGTGCAGAAGCAAGATGGCACCATGGCCTCATAGCTTaGGTCTGGACTGTGGGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: LLDPLRAPEFFCAEARWHHGLIA*VWTVGA Trigger: AGCCCCCACAGTCCAGACGCAAGCTATGAGGCCATG...GTGCCATCTTGCTTCTGCACAGAAAAACTCAGGGGCACGGAGAGGGTCCAGGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 5 transcripts: ENSMUST00000046999.12 ENSMUST00000111216.8 ENSMUST00000123227.3 ENSMUST00000149778.2 ENSMUST00000154469.8 |
||
| CDS-3UTR CCA 90 bp | GTGCCCCTGAGTTTTTCTGTGCAGAAGCAAGATGGCACAGATCCCAAGCCTAGATGGGGGCTGTCACCGTaGTTCCGGGCATCCACCGTC | + |
|
Preference number: 4 (lower is better) Translates to: VPLSFSVQKQDGTDPKPRWGLSP*FRASTV Trigger: GACGGTGGATGCCCGGAACCACGGTGACAGCCCCCA...TCTAGGCTTGGGATCTGTGCCATCTTGCTTCTGCACAGAAAAACTCAGGGGCAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 5 transcripts: ENSMUST00000046999.12 ENSMUST00000111216.8 ENSMUST00000123227.3 ENSMUST00000149778.2 ENSMUST00000154469.8 |
||
| CDS-3UTR CCA 90 bp | CAAGATGGCACAGATCCCAAGCCTAGAGTCCCCTGGCTGCTCTTCCAAGGAGCTCTCATAGCTTGCGTCTaGACTGTGGGGGCTGTCACC | + |
|
Preference number: 4 (lower is better) Translates to: QDGTDPKPRVPWLLFQGALIACV*TVGAVT Trigger: GGTGACAGCCCCCACAGTCCAGACGCAAGCTATGAG...AGCTCCTTGGAAGAGCAGCCAGGGGACTCTAGGCTTGGGATCTGTGCCATCTTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000046999.12 ENSMUST00000111216.8 ENSMUST00000123227.3 ENSMUST00000149778.2 ENSMUST00000154469.8 |
||
| CDS-3UTR CCA 90 bp | CTCCGTGCCCCTGAGTTTTTCTGTGCAGAAGCAAGATGGCACAGATCCCAAGCCCACCAGACCCAGCTGTaGAAGGAGGCCCTGAAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: LRAPEFFCAEARWHRSQAHQTQL*KEALKV Trigger: GACCTTCAGGGCCTCCTTCCACAGCTGGGTCTGGTG...GGCTTGGGATCTGTGCCATCTTGCTTCTGCACAGAAAAACTCAGGGGCACGGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000046999.12 ENSMUST00000111216.8 ENSMUST00000123227.3 ENSMUST00000149778.2 ENSMUST00000154469.8 |
||
| CDS-3UTR CCA 90 bp | CCCGCTTCCTTGACAACCGAACTAAGCTGCTTATCCGCCAGTTTTCGGGCTTGGCACCAGACCCAGCTGTaGAAGGAGGCCCTGAAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: PASLTTELSCLSASFRAWHQTQL*KEALKV Trigger: GACCTTCAGGGCCTCCTTCCACAGCTGGGTCTGGTG...CCAAGCCCGAAAACTGGCGGATAAGCAGCTTAGTTCGGTTGTCAAGGAAGCGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000123227.3 ENSMUST00000148831.3 |
||
| CDS-3UTR CCA 90 bp | CAGAAGCAAGATGGCACAGATCCCAAGCCTAGAGTCCCCTGGCTGCTCTTCCAATTTCCTCCCATGCTGTaGCCAACGAGGACGCAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: QKQDGTDPKPRVPWLLFQFPPML*PTRTQG Trigger: GCCCTGCGTCCTCGTTGGCCACAGCATGGGAGGAAA...TTGGAAGAGCAGCCAGGGGACTCTAGGCTTGGGATCTGTGCCATCTTGCTTCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000046999.12 ENSMUST00000111216.8 ENSMUST00000123227.3 ENSMUST00000149778.2 ENSMUST00000154469.8 |
||
| CDS-3UTR CCA 90 bp | GTACTCCTGGACCCTCTCCGTGCCCCTGAGTTTTTCTGTGCAGAAGCAAGATGGTTTCCTCCCATGCTGTaGCCAACGAGGACGCAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: VLLDPLRAPEFFCAEARWFPPML*PTRTQG Trigger: GCCCTGCGTCCTCGTTGGCCACAGCATGGGAGGAAA...CCATCTTGCTTCTGCACAGAAAAACTCAGGGGCACGGAGAGGGTCCAGGAGTAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000046999.12 ENSMUST00000111216.8 ENSMUST00000123227.3 ENSMUST00000149778.2 ENSMUST00000154469.8 |
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| CDS-3UTR CCA 90 bp | AGCAAGATGGCACAGATCCCAAGCCTAGAGTCCCCTGGCTGCTCTTCCAAGGAGGCAGTGCCAGGAGCATaGCTGTCTTTCCTCCCATGC | + |
|
Preference number: 4 (lower is better) Translates to: SKMAQIPSLESPGCSSKEAVPGA*LSFLPC Trigger: GCATGGGAGGAAAGACAGCCATGCTCCTGGCACTGC...CTCCTTGGAAGAGCAGCCAGGGGACTCTAGGCTTGGGATCTGTGCCATCTTGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000046999.12 ENSMUST00000111216.8 ENSMUST00000123227.3 ENSMUST00000149778.2 ENSMUST00000154469.8 |
||
| CDS-3UTR GCA 90 bp | GTGCAGAAGCAAGATGGCACAGATCCCAAGCCTAGAGTCCCCTGGCTGCTCTTCCTGCCGAAGAGCCCATaGAAAAAGACGATGGCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: VQKQDGTDPKPRVPWLLFLPKSP*KKTMAG Trigger: CCCAGCCATCGTCTTTTTGCATGGGCTCTTCGGCAG...GAAGAGCAGCCAGGGGACTCTAGGCTTGGGATCTGTGCCATCTTGCTTCTGCAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046999.12 ENSMUST00000123227.3 |
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| CDS-3UTR GCA 90 bp | AAGCAAGATGGCACAGATCCCAAGCCTAGAGTCCCCTGGCTGCTCTTCCAAGGACATGGCCTCATAGCTTaGGTCTGGACTGTGGGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: KQDGTDPKPRVPWLLFQGHGLIA*VWTVGA Trigger: AGCCCCCACAGTCCAGACGCAAGCTATGAGGCCATG...TCCTTGGAAGAGCAGCCAGGGGACTCTAGGCTTGGGATCTGTGCCATCTTGCTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000046999.12 ENSMUST00000111216.8 ENSMUST00000123227.3 ENSMUST00000149778.2 ENSMUST00000154469.8 |
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| CDS-3UTR GCA 90 bp | AAGATGGCACAGATCCCAAGCCTAGAGTCCCCTGGCTGCTCTTCCAAGGAGCTACTGTCTTTCCTCCCATaGTGTGGCCAACGAGGACGC | + |
|
Preference number: 4 (lower is better) Translates to: KMAQIPSLESPGCSSKELLSFLP*CGQRGR Trigger: GCGTCCTCGTTGGCCACAGCATGGGAGGAAAGACAG...TAGCTCCTTGGAAGAGCAGCCAGGGGACTCTAGGCTTGGGATCTGTGCCATCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000046999.12 ENSMUST00000111216.8 ENSMUST00000123227.3 ENSMUST00000149778.2 ENSMUST00000154469.8 |
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| CDS-3UTR GCA 90 bp | AGCAAGATGGCACAGATCCCAAGCCTAGAGTCCCCTGGCTGCTCTTCCAAGGAGATCTGGCCTCTGCAGTaGCAGGAGCATGGCTGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: SKMAQIPSLESPGCSSKEIWPLQ*QEHGCL Trigger: AAGACAGCCATGCTCCTGGCACTGCAGAGGCCAGAT...CTCCTTGGAAGAGCAGCCAGGGGACTCTAGGCTTGGGATCTGTGCCATCTTGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046999.12 ENSMUST00000111216.8 ENSMUST00000154469.8 |
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| CDS-3UTR GCA 90 bp | AAGATGGCACAGATCCCAAGCCTAGAGTCCCCTGGCTGCTCTTCCAAGGAGCTATTTCGGGCTTGGGAGTaGGGCACCTTCTCTGGGATC | + |
|
Preference number: 4 (lower is better) Translates to: KMAQIPSLESPGCSSKELFRAWE*GTFSGI Trigger: GATCCCAGAGAAGGTGCCGCACTCCCAAGCCCGAAA...TAGCTCCTTGGAAGAGCAGCCAGGGGACTCTAGGCTTGGGATCTGTGCCATCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046999.12 ENSMUST00000111216.8 ENSMUST00000154469.8 |
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| CDS-3UTR CCA 90 bp | CCTCTCCGTGCCCCTGAGTTTTTCTGTGCAGAAGCAAGATGGCACAGATCCCAAGAACCGCCAAACGCCTaGGAGAGGAGGCACCGAGTA | + |
|
Preference number: 4 (lower is better) Translates to: PLRAPEFFCAEARWHRSQEPPNA*ERRHRV Trigger: TACTCGGTGCCTCCTCTCCCAGGCGTTTGGCGGTTC...TTGGGATCTGTGCCATCTTGCTTCTGCACAGAAAAACTCAGGGGCACGGAGAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046999.12 ENSMUST00000123227.3 |
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| CDS-3UTR CCA 90 bp | CTGTACTCCTGGACCCTCTCCGTGCCCCTGAGTTTTTCTGTGCAGAAGCAAGATCTTGCGTCTGGACTGTaGGGGCTGTCACCGTGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: LYSWTLSVPLSFSVQKQDLASGL*GLSPWF Trigger: GAACCACGGTGACAGCCCCCACAGTCCAGACGCAAG...ATCTTGCTTCTGCACAGAAAAACTCAGGGGCACGGAGAGGGTCCAGGAGTACAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000046999.12 ENSMUST00000111216.8 ENSMUST00000123227.3 ENSMUST00000149778.2 ENSMUST00000154469.8 |
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| CDS-3UTR CCA 90 bp | AAGATGGCACAGATCCCAAGCCTAGAGTCCCCTGGCTGCTCTTCCAAGGAGCTACTCATAGCTTGCGTCTaGACTGTGGGGGCTGTCACC | + |
|
Preference number: 4 (lower is better) Translates to: KMAQIPSLESPGCSSKELLIACV*TVGAVT Trigger: GGTGACAGCCCCCACAGTCCAGACGCAAGCTATGAG...TAGCTCCTTGGAAGAGCAGCCAGGGGACTCTAGGCTTGGGATCTGTGCCATCTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000046999.12 ENSMUST00000111216.8 ENSMUST00000123227.3 ENSMUST00000149778.2 ENSMUST00000154469.8 |
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| CDS-3UTR CCA 90 bp | CAGAAGCAAGATGGCACAGATCCCAAGCCTAGAGTCCCCTGGCTGCTCTTCCAACTCATAGCTTGCGTCTaGACTGTGGGGGCTGTCACC | + |
|
Preference number: 4 (lower is better) Translates to: QKQDGTDPKPRVPWLLFQLIACV*TVGAVT Trigger: GGTGACAGCCCCCACAGTCCAGACGCAAGCTATGAG...TTGGAAGAGCAGCCAGGGGACTCTAGGCTTGGGATCTGTGCCATCTTGCTTCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000046999.12 ENSMUST00000111216.8 ENSMUST00000123227.3 ENSMUST00000149778.2 ENSMUST00000154469.8 |
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| CDS-3UTR CCA 90 bp | TCCTGGACCCTCTCCGTGCCCCTGAGTTTTTCTGTGCAGAAGCAAGATGGCACACTCATAGCTTGCGTCTaGACTGTGGGGGCTGTCACC | + |
|
Preference number: 4 (lower is better) Translates to: SWTLSVPLSFSVQKQDGTLIACV*TVGAVT Trigger: GGTGACAGCCCCCACAGTCCAGACGCAAGCTATGAG...TGTGCCATCTTGCTTCTGCACAGAAAAACTCAGGGGCACGGAGAGGGTCCAGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 5 transcripts: ENSMUST00000046999.12 ENSMUST00000111216.8 ENSMUST00000123227.3 ENSMUST00000149778.2 ENSMUST00000154469.8 |
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| CDS-3UTR CCA 90 bp | CCACCCACCTCTACCAGGTTAGTGAGCAGGAACTGCCGAATGCCCGCTTCCTTGGAAGGTCCTGACTCATaGCCTCATAGCTTGCGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: PPTSTRLVSRNCRMPASLEGPDS*PHSLRL Trigger: CAGACGCAAGCTATGAGGCCATGAGTCAGGACCTTC...CAAGGAAGCGGGCATTCGGCAGTTCCTGCTCACTAACCTGGTAGAGGTGGGTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000123227.3 ENSMUST00000148831.3 |
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| CDS-3UTR CCA 90 bp | CTCTCCGTGCCCCTGAGTTTTTCTGTGCAGAAGCAAGATGGCACAGATCCCAAGCACCAGACCCAGCTGTaGAAGGAGGCCCTGAAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: LSVPLSFSVQKQDGTDPKHQTQL*KEALKV Trigger: GACCTTCAGGGCCTCCTTCCACAGCTGGGTCTGGTG...CTTGGGATCTGTGCCATCTTGCTTCTGCACAGAAAAACTCAGGGGCACGGAGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000046999.12 ENSMUST00000111216.8 ENSMUST00000123227.3 ENSMUST00000149778.2 ENSMUST00000154469.8 |
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| CDS-3UTR CCA 90 bp | CTCCGTGCCCCTGAGTTTTTCTGTGCAGAAGCAAGATGGCACAGATCCCAAGCCGCAGTGCCAGGAGCATaGCTGTCTTTCCTCCCATGC | + |
|
Preference number: 4 (lower is better) Translates to: LRAPEFFCAEARWHRSQAAVPGA*LSFLPC Trigger: GCATGGGAGGAAAGACAGCCATGCTCCTGGCACTGC...GGCTTGGGATCTGTGCCATCTTGCTTCTGCACAGAAAAACTCAGGGGCACGGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000046999.12 ENSMUST00000111216.8 ENSMUST00000123227.3 ENSMUST00000149778.2 ENSMUST00000154469.8 |
||
| CDS-3UTR CCA 90 bp | ACCCTCTCCGTGCCCCTGAGTTTTTCTGTGCAGAAGCAAGATGGCACAGATCCCGCAGTGCCAGGAGCATaGCTGTCTTTCCTCCCATGC | + |
|
Preference number: 4 (lower is better) Translates to: TLSVPLSFSVQKQDGTDPAVPGA*LSFLPC Trigger: GCATGGGAGGAAAGACAGCCATGCTCCTGGCACTGC...GGGATCTGTGCCATCTTGCTTCTGCACAGAAAAACTCAGGGGCACGGAGAGGGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000046999.12 ENSMUST00000111216.8 ENSMUST00000123227.3 ENSMUST00000149778.2 ENSMUST00000154469.8 |
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| 3UTR CAA 72 bp | AAGAAGCTGGTGACAGCATCCATGAAGTCTTGGGGTTaGTCGCTGTGGACCCAGTGGCCAGCGTTAGGCACG | + |
|
Preference number: 4 (lower is better) Translates to: KKLVTASMKSWG*SLWTQWPALGT Trigger: CGTGCCTAACGCTGGCCACTGGGTCCACAGCGACAAACCCCAAGACTTCATGGATGCTGTCACCAGCTTCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000123227.3 ENSMUST00000149778.2 |
||
| CDS-3UTR TCA 90 bp | CTCCTGGACCCTCTCCGTGCCCCTGAGTTTTTCTGTGCAGAAGCAAGATGGCACGAAGGCTCCAATGTGTaGTCCAGGTGTGGTTCCTAC | + |
|
Preference number: 4 (lower is better) Translates to: LLDPLRAPEFFCAEARWHEGSNV*SRCGSY Trigger: GTAGGAACCACACCTGGATCACACATTGGAGCCTTC...GTGCCATCTTGCTTCTGCACAGAAAAACTCAGGGGCACGGAGAGGGTCCAGGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000046999.12 ENSMUST00000111216.8 ENSMUST00000154469.8 |
||
| CDS-3UTR GCA 90 bp | AGAATTTCCACCAAGCAGGAAGAGAGTTGGCCCCGAGTAGGGTTCACGTTGCTGCTGTCTTTCCTCCCATaGTGTGGCCAACGAGGACGC | + |
|
Preference number: 4 (lower is better) Translates to: RISTKQEESWPRVGFTLLLSFLP*CGQRGR Trigger: GCGTCCTCGTTGGCCACAGCATGGGAGGAAAGACAG...CAGCAACGTGAACCCTACTCGGGGCCAACTCTCTTCCTGCTTGGTGGAAATTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000123227.3 ENSMUST00000148831.3 ENSMUST00000149778.2 |
||
| CDS-3UTR GCA 90 bp | TTTTCTGTGCAGAAGCAAGATGGCACAGATCCCAAGCCTAGAGTCCCCTGGCTGCTGTCTTTCCTCCCATaGTGTGGCCAACGAGGACGC | + |
|
Preference number: 4 (lower is better) Translates to: FSVQKQDGTDPKPRVPWLLSFLP*CGQRGR Trigger: GCGTCCTCGTTGGCCACAGCATGGGAGGAAAGACAG...CAGCCAGGGGACTCTAGGCTTGGGATCTGTGCCATCTTGCTTCTGCACAGAAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000046999.12 ENSMUST00000111216.8 ENSMUST00000123227.3 ENSMUST00000149778.2 ENSMUST00000154469.8 |
||
| CDS-3UTR GCA 90 bp | AAGCAAGATGGCACAGATCCCAAGCCTAGAGTCCCCTGGCTGCTCTTCCAAGGAACAACATCTGGCCTCTaGAGTGCCAGGAGCATGGCT | + |
|
Preference number: 4 (lower is better) Translates to: KQDGTDPKPRVPWLLFQGTTSGL*SARSMA Trigger: AGCCATGCTCCTGGCACTGCAGAGGCCAGATGTTGT...TCCTTGGAAGAGCAGCCAGGGGACTCTAGGCTTGGGATCTGTGCCATCTTGCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046999.12 ENSMUST00000111216.8 ENSMUST00000154469.8 |
||
| CDS-3UTR GCA 90 bp | GTACTCCTGGACCCTCTCCGTGCCCCTGAGTTTTTCTGTGCAGAAGCAAGATGGACAACATCTGGCCTCTaGAGTGCCAGGAGCATGGCT | + |
|
Preference number: 4 (lower is better) Translates to: VLLDPLRAPEFFCAEARWTTSGL*SARSMA Trigger: AGCCATGCTCCTGGCACTGCAGAGGCCAGATGTTGT...CCATCTTGCTTCTGCACAGAAAAACTCAGGGGCACGGAGAGGGTCCAGGAGTAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000046999.12 ENSMUST00000111216.8 ENSMUST00000154469.8 |
||
| CDS-3UTR CCA 90 bp | TGGACCCTCTCCGTGCCCCTGAGTTTTTCTGTGCAGAAGCAAGATGGCACAGATCTCATAGCTTGCGTCTaGACTGTGGGGGCTGTCACC | + |
|
Preference number: 4 (lower is better) Translates to: WTLSVPLSFSVQKQDGTDLIACV*TVGAVT Trigger: GGTGACAGCCCCCACAGTCCAGACGCAAGCTATGAG...ATCTGTGCCATCTTGCTTCTGCACAGAAAAACTCAGGGGCACGGAGAGGGTCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 5 transcripts: ENSMUST00000046999.12 ENSMUST00000111216.8 ENSMUST00000123227.3 ENSMUST00000149778.2 ENSMUST00000154469.8 |
||
| 3UTR CAA 72 bp | AACCGAACTAAGCTGCTTATCCGCCAGTTTTCGGGCTaGGGAGTGCGGCACCTTCTCTGGGATCTCAACAGC | + |
|
Preference number: 4 (lower is better) Translates to: NRTKLLIRQFSG*GVRHLLWDLNS Trigger: GCTGTTGAGATCCCAGAGAAGGTGCCGCACTCCCAAGCCCGAAAACTGGCGGATAAGCAGCTTAGTTCGGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000123227.3 ENSMUST00000148831.3 ENSMUST00000149778.2 |
||
| CDS-3UTR TCA 90 bp | CCTCTCCGTGCCCCTGAGTTTTTCTGTGCAGAAGCAAGATGGCACAGATCCCAACCTTGGCGAGGGAGTTaGAGTTGGTTTTGCTGCCGA | + |
|
Preference number: 4 (lower is better) Translates to: PLRAPEFFCAEARWHRSQPWRGS*SWFCCR Trigger: TCGGCAGCAAAACCAACTTCAACTCCCTCGCCAAGG...TTGGGATCTGTGCCATCTTGCTTCTGCACAGAAAAACTCAGGGGCACGGAGAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000046999.12 ENSMUST00000123227.3 |
||
| CDS-3UTR TCA 90 bp | TCTGTGCAGAAGCAAGATGGCACAGATCCCAAGCCTAGAGTCCCCTGGCTGCTCCCTTCATGGCTGCTATaGAGGCTCCAATGTGTGATC | + |
|
Preference number: 4 (lower is better) Translates to: SVQKQDGTDPKPRVPWLLPSWLL*RLQCVI Trigger: GATCACACATTGGAGCCTTCATAGCAGCCATGAAGG...GAGCAGCCAGGGGACTCTAGGCTTGGGATCTGTGCCATCTTGCTTCTGCACAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046999.12 ENSMUST00000111216.8 ENSMUST00000154469.8 |
||
| CDS-3UTR TCA 90 bp | TCCGTGCCCCTGAGTTTTTCTGTGCAGAAGCAAGATGGCACAGATCCCAAGCCTGAGTCGCCTAATCTCTaGGTGGTGGCTGGGTTGTAC | + |
|
Preference number: 4 (lower is better) Translates to: SVPLSFSVQKQDGTDPKPESPNL*VVAGLY Trigger: GTACAACCCAGCCACCACTCAGAGATTAGGCGACTC...AGGCTTGGGATCTGTGCCATCTTGCTTCTGCACAGAAAAACTCAGGGGCACGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000046999.12 ENSMUST00000111216.8 ENSMUST00000154469.8 |
||
| CDS-3UTR TCA 90 bp | CCTCTCCGTGCCCCTGAGTTTTTCTGTGCAGAAGCAAGATGGCACAGATCCCAAGAGTCGCCTAATCTCTaGGTGGTGGCTGGGTTGTAC | + |
|
Preference number: 4 (lower is better) Translates to: PLRAPEFFCAEARWHRSQESPNL*VVAGLY Trigger: GTACAACCCAGCCACCACTCAGAGATTAGGCGACTC...TTGGGATCTGTGCCATCTTGCTTCTGCACAGAAAAACTCAGGGGCACGGAGAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000046999.12 ENSMUST00000111216.8 ENSMUST00000154469.8 |
||
| CDS-3UTR GCA 90 bp | TCCGTGCCCCTGAGTTTTTCTGTGCAGAAGCAAGATGGCACAGATCCCAAGCCTCTGCCGAAGAGCCCATaGAAAAAGACGATGGCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: SVPLSFSVQKQDGTDPKPLPKSP*KKTMAG Trigger: CCCAGCCATCGTCTTTTTGCATGGGCTCTTCGGCAG...AGGCTTGGGATCTGTGCCATCTTGCTTCTGCACAGAAAAACTCAGGGGCACGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000046999.12 ENSMUST00000123227.3 |
||
| CDS-3UTR GCA 90 bp | GTGCCCCTGAGTTTTTCTGTGCAGAAGCAAGATGGCACAGATCCCAAGCCTAGACATGGCCTCATAGCTTaGGTCTGGACTGTGGGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: VPLSFSVQKQDGTDPKPRHGLIA*VWTVGA Trigger: AGCCCCCACAGTCCAGACGCAAGCTATGAGGCCATG...TCTAGGCTTGGGATCTGTGCCATCTTGCTTCTGCACAGAAAAACTCAGGGGCAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 5 transcripts: ENSMUST00000046999.12 ENSMUST00000111216.8 ENSMUST00000123227.3 ENSMUST00000149778.2 ENSMUST00000154469.8 |
||
| CDS-3UTR GCA 90 bp | GTGCCCCTGAGTTTTTCTGTGCAGAAGCAAGATGGCACAGATCCCAAGCCTAGACTGTCTTTCCTCCCATaGTGTGGCCAACGAGGACGC | + |
|
Preference number: 4 (lower is better) Translates to: VPLSFSVQKQDGTDPKPRLSFLP*CGQRGR Trigger: GCGTCCTCGTTGGCCACAGCATGGGAGGAAAGACAG...TCTAGGCTTGGGATCTGTGCCATCTTGCTTCTGCACAGAAAAACTCAGGGGCAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000046999.12 ENSMUST00000111216.8 ENSMUST00000123227.3 ENSMUST00000149778.2 ENSMUST00000154469.8 |
||
| CDS-3UTR GCA 90 bp | CCCCTGAGTTTTTCTGTGCAGAAGCAAGATGGCACAGATCCCAAGCCTAGAGTCCTGTCTTTCCTCCCATaGTGTGGCCAACGAGGACGC | + |
|
Preference number: 4 (lower is better) Translates to: PLSFSVQKQDGTDPKPRVLSFLP*CGQRGR Trigger: GCGTCCTCGTTGGCCACAGCATGGGAGGAAAGACAG...GACTCTAGGCTTGGGATCTGTGCCATCTTGCTTCTGCACAGAAAAACTCAGGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000046999.12 ENSMUST00000111216.8 ENSMUST00000123227.3 ENSMUST00000149778.2 ENSMUST00000154469.8 |
||
| CDS-3UTR GCA 90 bp | CTCTCCGTGCCCCTGAGTTTTTCTGTGCAGAAGCAAGATGGCACAGATCCCAAGATCTGGCCTCTGCAGTaGCAGGAGCATGGCTGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: LSVPLSFSVQKQDGTDPKIWPLQ*QEHGCL Trigger: AAGACAGCCATGCTCCTGGCACTGCAGAGGCCAGAT...CTTGGGATCTGTGCCATCTTGCTTCTGCACAGAAAAACTCAGGGGCACGGAGAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000046999.12 ENSMUST00000111216.8 ENSMUST00000154469.8 |
||
| CDS-3UTR GCA 90 bp | TCCGTGCCCCTGAGTTTTTCTGTGCAGAAGCAAGATGGCACAGATCCCAAGCCTACAACATCTGGCCTCTaGAGTGCCAGGAGCATGGCT | + |
|
Preference number: 4 (lower is better) Translates to: SVPLSFSVQKQDGTDPKPTTSGL*SARSMA Trigger: AGCCATGCTCCTGGCACTGCAGAGGCCAGATGTTGT...AGGCTTGGGATCTGTGCCATCTTGCTTCTGCACAGAAAAACTCAGGGGCACGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000046999.12 ENSMUST00000111216.8 ENSMUST00000154469.8 |
||
| CDS-3UTR CCA 90 bp | CCCGCTTCCTTGACAACCGAACTAAGCTGCTTATCCGCCAGTTTTCGGGCTTGGCATGCAAAAAGACGATaGCTGGGAGTGTCGCGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: PASLTTELSCLSASFRAWHAKRR*LGVSRL Trigger: GAGACGCGACACTCCCAGCCATCGTCTTTTTGCATG...CCAAGCCCGAAAACTGGCGGATAAGCAGCTTAGTTCGGTTGTCAAGGAAGCGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000123227.3 |
||
| CDS-3UTR CCA 90 bp | GTGCCCCTGAGTTTTTCTGTGCAGAAGCAAGATGGCACAGATCCCAAGCCTAGAGCAGTGCCAGGAGCATaGCTGTCTTTCCTCCCATGC | + |
|
Preference number: 4 (lower is better) Translates to: VPLSFSVQKQDGTDPKPRAVPGA*LSFLPC Trigger: GCATGGGAGGAAAGACAGCCATGCTCCTGGCACTGC...TCTAGGCTTGGGATCTGTGCCATCTTGCTTCTGCACAGAAAAACTCAGGGGCAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000046999.12 ENSMUST00000111216.8 ENSMUST00000123227.3 ENSMUST00000149778.2 ENSMUST00000154469.8 |
||
| CDS-3UTR CCA 90 bp | TCCGTGCCCCTGAGTTTTTCTGTGCAGAAGCAAGATGGCACAGATCCCAAGCCTTCGTTCCACAACATCTaGCCTCTGCAGTGCCAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: SVPLSFSVQKQDGTDPKPSFHNI*PLQCQE Trigger: CTCCTGGCACTGCAGAGGCCAGATGTTGTGGAACGA...AGGCTTGGGATCTGTGCCATCTTGCTTCTGCACAGAAAAACTCAGGGGCACGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000046999.12 ENSMUST00000111216.8 ENSMUST00000154469.8 |
||
| CDS-3UTR CCA 90 bp | GTACTCCTGGACCCTCTCCGTGCCCCTGAGTTTTTCTGTGCAGAAGCAAGATGGGTGCGGCACCTTCTCTaGGATCTCAACAGCCTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: VLLDPLRAPEFFCAEARWVRHLL*DLNSLH Trigger: ATGAAGGCTGTTGAGATCCCAGAGAAGGTGCCGCAC...CCATCTTGCTTCTGCACAGAAAAACTCAGGGGCACGGAGAGGGTCCAGGAGTAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000046999.12 ENSMUST00000111216.8 ENSMUST00000154469.8 |
||
| CDS-3UTR CCA 90 bp | AAGATGGCACAGATCCCAAGCCTAGAGTCCCCTGGCTGCTCTTCCAAGGAGCTAGTGCGGCACCTTCTCTaGGATCTCAACAGCCTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: KMAQIPSLESPGCSSKELVRHLL*DLNSLH Trigger: ATGAAGGCTGTTGAGATCCCAGAGAAGGTGCCGCAC...TAGCTCCTTGGAAGAGCAGCCAGGGGACTCTAGGCTTGGGATCTGTGCCATCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046999.12 ENSMUST00000111216.8 ENSMUST00000154469.8 |
||
| 3UTR CAA 72 bp | TTAAGCCAAGAAGCTGGTGACAGCATCCATGAAGTCTaGGGGTTTGTCGCTGTGGACCCAGTGGCCAGCGTT | + |
|
Preference number: 4 (lower is better) Translates to: LSQEAGDSIHEV*GFVAVDPVASV Trigger: AACGCTGGCCACTGGGTCCACAGCGACAAACCCCAAGACTTCATGGATGCTGTCACCAGCTTCTTGGCTTAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000123227.3 ENSMUST00000149778.2 |
||
| CDS-3UTR TCA 90 bp | TTTTCTGTGCAGAAGCAAGATGGCACAGATCCCAAGCCTAGAGTCCCCTGGCTGGAAGGCTCCAATGTGTaGTCCAGGTGTGGTTCCTAC | + |
|
Preference number: 4 (lower is better) Translates to: FSVQKQDGTDPKPRVPWLEGSNV*SRCGSY Trigger: GTAGGAACCACACCTGGATCACACATTGGAGCCTTC...CAGCCAGGGGACTCTAGGCTTGGGATCTGTGCCATCTTGCTTCTGCACAGAAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046999.12 ENSMUST00000111216.8 ENSMUST00000154469.8 |
||
| CDS-3UTR TCA 90 bp | TCTGTACTCCTGGACCCTCTCCGTGCCCCTGAGTTTTTCTGTGCAGAAGCAAGAGAAGGCTCCAATGTGTaGTCCAGGTGTGGTTCCTAC | + |
|
Preference number: 4 (lower is better) Translates to: SVLLDPLRAPEFFCAEAREGSNV*SRCGSY Trigger: GTAGGAACCACACCTGGATCACACATTGGAGCCTTC...TCTTGCTTCTGCACAGAAAAACTCAGGGGCACGGAGAGGGTCCAGGAGTACAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000046999.12 ENSMUST00000111216.8 ENSMUST00000154469.8 |
||
| CDS-3UTR GCA 90 bp | CTCCTGGACCCTCTCCGTGCCCCTGAGTTTTTCTGTGCAGAAGCAAGATGGCACACAACCGAACTAAGCTaGTTATCCGCCAGTTTTCGG | + |
|
Preference number: 4 (lower is better) Translates to: LLDPLRAPEFFCAEARWHTTELS*LSASFR Trigger: CCGAAAACTGGCGGATAAGCAGCTTAGTTCGGTTGT...GTGCCATCTTGCTTCTGCACAGAAAAACTCAGGGGCACGGAGAGGGTCCAGGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000046999.12 ENSMUST00000111216.8 ENSMUST00000154469.8 |
||
| CDS-3UTR GCA 90 bp | GTGCAGAAGCAAGATGGCACAGATCCCAAGCCTAGAGTCCCCTGGCTGCTCTTCACAACCGAACTAAGCTaGTTATCCGCCAGTTTTCGG | + |
|
Preference number: 4 (lower is better) Translates to: VQKQDGTDPKPRVPWLLFTTELS*LSASFR Trigger: CCGAAAACTGGCGGATAAGCAGCTTAGTTCGGTTGT...GAAGAGCAGCCAGGGGACTCTAGGCTTGGGATCTGTGCCATCTTGCTTCTGCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046999.12 ENSMUST00000111216.8 ENSMUST00000154469.8 |
||
| CDS-3UTR GCA 90 bp | AGTTTTTCTGTGCAGAAGCAAGATGGCACAGATCCCAAGCCTAGAGTCCCCTGGGCTTACCCTCTGCAGTaGCAGGAGCATGGCTGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: SFSVQKQDGTDPKPRVPWAYPLQ*QEHGCL Trigger: AAGACAGCCATGCTCCTGGCACTGCAGAGGGTAAGC...CCAGGGGACTCTAGGCTTGGGATCTGTGCCATCTTGCTTCTGCACAGAAAAACT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000123227.3 ENSMUST00000149778.2 |
||
| CDS-3UTR CCA 90 bp | CTACAACAACCAATCGTTCCACAACATCTGGCTGGGAGACAGAATCAGACCAGACTTGCGTCTGGACTGTaGGGGCTGTCACCGTGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: LQQPIVPQHLAGRQNQTRLASGL*GLSPWF Trigger: GAACCACGGTGACAGCCCCCACAGTCCAGACGCAAG...TCTGGTCTGATTCTGTCTCCCAGCCAGATGTTGTGGAACGATTGGTTGTTGTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000123227.3 ENSMUST00000149778.2 |
||
| CDS-3UTR CCA 90 bp | TCTGGGATCTCAACAGCCTTCATGGCTGCTATGAAGGCTCCAATGTGTGATCCACTCATAGCTTGCGTCTaGACTGTGGGGGCTGTCACC | + |
|
Preference number: 4 (lower is better) Translates to: SGISTAFMAAMKAPMCDPLIACV*TVGAVT Trigger: GGTGACAGCCCCCACAGTCCAGACGCAAGCTATGAG...TGGATCACACATTGGAGCCTTCATAGCAGCCATGAAGGCTGTTGAGATCCCAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000123227.3 ENSMUST00000148831.3 ENSMUST00000149778.2 |
||
| CDS-3UTR CCA 90 bp | CTGTACTCCTGGACCCTCTCCGTGCCCCTGAGTTTTTCTGTGCAGAAGCAAGATGAAGGTCCTGACTCATaGCCTCATAGCTTGCGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: LYSWTLSVPLSFSVQKQDEGPDS*PHSLRL Trigger: CAGACGCAAGCTATGAGGCCATGAGTCAGGACCTTC...ATCTTGCTTCTGCACAGAAAAACTCAGGGGCACGGAGAGGGTCCAGGAGTACAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000046999.12 ENSMUST00000111216.8 ENSMUST00000123227.3 ENSMUST00000149778.2 ENSMUST00000154469.8 |
||
| CDS-3UTR CCA 90 bp | TTTTCTGTGCAGAAGCAAGATGGCACAGATCCCAAGCCTAGAGTCCCCTGGCTGGAAGGTCCTGACTCATaGCCTCATAGCTTGCGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: FSVQKQDGTDPKPRVPWLEGPDS*PHSLRL Trigger: CAGACGCAAGCTATGAGGCCATGAGTCAGGACCTTC...CAGCCAGGGGACTCTAGGCTTGGGATCTGTGCCATCTTGCTTCTGCACAGAAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000046999.12 ENSMUST00000111216.8 ENSMUST00000123227.3 ENSMUST00000149778.2 ENSMUST00000154469.8 |
||
| CDS-3UTR CCA 90 bp | TTTTCTGTGCAGAAGCAAGATGGCACAGATCCCAAGCCTAGAGTCCCCTGGCTGGTGCGGCACCTTCTCTaGGATCTCAACAGCCTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: FSVQKQDGTDPKPRVPWLVRHLL*DLNSLH Trigger: ATGAAGGCTGTTGAGATCCCAGAGAAGGTGCCGCAC...CAGCCAGGGGACTCTAGGCTTGGGATCTGTGCCATCTTGCTTCTGCACAGAAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046999.12 ENSMUST00000111216.8 ENSMUST00000154469.8 |
||
| CDS-3UTR TCA 90 bp | CTGTACTCCTGGACCCTCTCCGTGCCCCTGAGTTTTTCTGTGCAGAAGCAAGATCCTTCATGGCTGCTATaGAGGCTCCAATGTGTGATC | + |
|
Preference number: 4 (lower is better) Translates to: LYSWTLSVPLSFSVQKQDPSWLL*RLQCVI Trigger: GATCACACATTGGAGCCTTCATAGCAGCCATGAAGG...ATCTTGCTTCTGCACAGAAAAACTCAGGGGCACGGAGAGGGTCCAGGAGTACAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000046999.12 ENSMUST00000111216.8 ENSMUST00000154469.8 |
||
| CDS-3UTR TCA 90 bp | TCTGTACTCCTGGACCCTCTCCGTGCCCCTGAGTTTTTCTGTGCAGAAGCAAGACCTTCATGGCTGCTATaGAGGCTCCAATGTGTGATC | + |
|
Preference number: 4 (lower is better) Translates to: SVLLDPLRAPEFFCAEARPSWLL*RLQCVI Trigger: GATCACACATTGGAGCCTTCATAGCAGCCATGAAGG...TCTTGCTTCTGCACAGAAAAACTCAGGGGCACGGAGAGGGTCCAGGAGTACAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000046999.12 ENSMUST00000111216.8 ENSMUST00000154469.8 |
||
| CDS-3UTR CCA 90 bp | GTGCCCCTGAGTTTTTCTGTGCAGAAGCAAGATGGCACAGATCCCAAGCCTAGACATGCAAAAAGACGATaGCTGGGAGTGTCGCGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: VPLSFSVQKQDGTDPKPRHAKRR*LGVSRL Trigger: GAGACGCGACACTCCCAGCCATCGTCTTTTTGCATG...TCTAGGCTTGGGATCTGTGCCATCTTGCTTCTGCACAGAAAAACTCAGGGGCAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000046999.12 ENSMUST00000123227.3 |
||
| CDS-3UTR CCA 90 bp | CCCCTGAGTTTTTCTGTGCAGAAGCAAGATGGCACAGATCCCAAGCCTAGAGTCGAAGGTCCTGACTCATaGCCTCATAGCTTGCGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: PLSFSVQKQDGTDPKPRVEGPDS*PHSLRL Trigger: CAGACGCAAGCTATGAGGCCATGAGTCAGGACCTTC...GACTCTAGGCTTGGGATCTGTGCCATCTTGCTTCTGCACAGAAAAACTCAGGGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000046999.12 ENSMUST00000111216.8 ENSMUST00000123227.3 ENSMUST00000149778.2 ENSMUST00000154469.8 |
||
| CDS-3UTR CCA 90 bp | CTTCCAAGGAGCTACTTCTTAAGCCAAGAAGCTGGTGACAGCATCCATGAAGTCGCAGTGCCAGGAGCATaGCTGTCTTTCCTCCCATGC | + |
|
Preference number: 4 (lower is better) Translates to: LPRSYFLSQEAGDSIHEVAVPGA*LSFLPC Trigger: GCATGGGAGGAAAGACAGCCATGCTCCTGGCACTGC...GACTTCATGGATGCTGTCACCAGCTTCTTGGCTTAAGAAGTAGCTCCTTGGAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000123227.3 ENSMUST00000149778.2 |
||
| CDS-3UTR GCA 90 bp | CCTCTCCGTGCCCCTGAGTTTTTCTGTGCAGAAGCAAGATGGCACAGATCCCAAACAACCGAACTAAGCTaGTTATCCGCCAGTTTTCGG | + |
|
Preference number: 4 (lower is better) Translates to: PLRAPEFFCAEARWHRSQTTELS*LSASFR Trigger: CCGAAAACTGGCGGATAAGCAGCTTAGTTCGGTTGT...TTGGGATCTGTGCCATCTTGCTTCTGCACAGAAAAACTCAGGGGCACGGAGAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000046999.12 ENSMUST00000111216.8 ENSMUST00000154469.8 |
||
| CDS-3UTR CCA 90 bp | GAACTGTCTTTATTCATTAAAAGTGTTGGGCCACTTCTGTACTCCTGGACCCTCCACCAGACCCAGCTGTaGAAGGAGGCCCTGAAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: ELSLFIKSVGPLLYSWTLHQTQL*KEALKV Trigger: GACCTTCAGGGCCTCCTTCCACAGCTGGGTCTGGTG...GAGGGTCCAGGAGTACAGAAGTGGCCCAACACTTTTAATGAATAAAGACAGTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000046999.12 ENSMUST00000123227.3 ENSMUST00000149778.2 ENSMUST00000154469.8 |
||
| 3UTR CAA 72 bp | AGGTTAGTGAGCAGGAACTGCCGAATGCCCGCTTCCTaGACAACCGAACTAAGCTGCTTATCCGCCAGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: RLVSRNCRMPAS*TTELSCLSASF Trigger: AAAACTGGCGGATAAGCAGCTTAGTTCGGTTGTCAAGGAAGCGGGCATTCGGCAGTTCCTGCTCACTAACCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000123227.3 ENSMUST00000148831.3 |
||
| CDS-3UTR GCA 90 bp | GGGAACTGTCTTTATTCATTAAAAGTGTTGGGCCACTTCTGTACTCCTGGACCCATCTGGCCTCTGCAGTaGCAGGAGCATGGCTGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: GNCLYSLKVLGHFCTPGPIWPLQ*QEHGCL Trigger: AAGACAGCCATGCTCCTGGCACTGCAGAGGCCAGAT...GGGTCCAGGAGTACAGAAGTGGCCCAACACTTTTAATGAATAAAGACAGTTCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046999.12 ENSMUST00000154469.8 |
||
| CDS-3UTR GCA 90 bp | GAACTGTCTTTATTCATTAAAAGTGTTGGGCCACTTCTGTACTCCTGGACCCTCTTTCGGGCTTGGGAGTaGGGCACCTTCTCTGGGATC | + |
|
Preference number: 4 (lower is better) Translates to: ELSLFIKSVGPLLYSWTLFRAWE*GTFSGI Trigger: GATCCCAGAGAAGGTGCCGCACTCCCAAGCCCGAAA...GAGGGTCCAGGAGTACAGAAGTGGCCCAACACTTTTAATGAATAAAGACAGTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046999.12 ENSMUST00000154469.8 |
||
| CDS-3UTR GCA 90 bp | GGGAACTGTCTTTATTCATTAAAAGTGTTGGGCCACTTCTGTACTCCTGGACCCGCTTACCCTCTGCAGTaGCAGGAGCATGGCTGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: GNCLYSLKVLGHFCTPGPAYPLQ*QEHGCL Trigger: AAGACAGCCATGCTCCTGGCACTGCAGAGGGTAAGC...GGGTCCAGGAGTACAGAAGTGGCCCAACACTTTTAATGAATAAAGACAGTTCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000123227.3 ENSMUST00000149778.2 |
||
| CDS-3UTR GCA 90 bp | AAGGGGAACTGTCTTTATTCATTAAAAGTGTTGGGCCACTTCTGTACTCCTGGATTTCGGGCTTGGGAGTaGGGCACCTTCTCTGGGATC | + |
|
Preference number: 4 (lower is better) Translates to: KGNCLYSLKVLGHFCTPGFRAWE*GTFSGI Trigger: GATCCCAGAGAAGGTGCCGCACTCCCAAGCCCGAAA...TCCAGGAGTACAGAAGTGGCCCAACACTTTTAATGAATAAAGACAGTTCCCCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046999.12 ENSMUST00000154469.8 |
||
| 3UTR CAA 72 bp | GGCTTAAAGGGGAACTGTCTTTATTCATTAAAAGTGTaGGGCCACTTCTGTACTCCTGGACCCTCTCCGTGC | + |
|
Preference number: 4 (lower is better) Translates to: GLKGNCLYSLKV*GHFCTPGPSPC Trigger: GCACGGAGAGGGTCCAGGAGTACAGAAGTGGCCCAACACTTTTAATGAATAAAGACAGTTCCCCTTTAAGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046999.12 |
||
| CDS-3UTR TCA 90 bp | AAGGGGAACTGTCTTTATTCATTAAAAGTGTTGGGCCACTTCTGTACTCCTGGACCTTGGCGAGGGAGTTaGAGTTGGTTTTGCTGCCGA | + |
|
Preference number: 4 (lower is better) Translates to: KGNCLYSLKVLGHFCTPGPWRGS*SWFCCR Trigger: TCGGCAGCAAAACCAACTTCAACTCCCTCGCCAAGG...TCCAGGAGTACAGAAGTGGCCCAACACTTTTAATGAATAAAGACAGTTCCCCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000046999.12 ENSMUST00000123227.3 |
||
| CDS-3UTR TCA 90 bp | AAGGGGAACTGTCTTTATTCATTAAAAGTGTTGGGCCACTTCTGTACTCCTGGAGAGTCGCCTAATCTCTaGGTGGTGGCTGGGTTGTAC | + |
|
Preference number: 4 (lower is better) Translates to: KGNCLYSLKVLGHFCTPGESPNL*VVAGLY Trigger: GTACAACCCAGCCACCACTCAGAGATTAGGCGACTC...TCCAGGAGTACAGAAGTGGCCCAACACTTTTAATGAATAAAGACAGTTCCCCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046999.12 ENSMUST00000154469.8 |
||
| CDS-3UTR CCA 90 bp | GAACTGTCTTTATTCATTAAAAGTGTTGGGCCACTTCTGTACTCCTGGACCCTCGAAGGTCCTGACTCATaGCCTCATAGCTTGCGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: ELSLFIKSVGPLLYSWTLEGPDS*PHSLRL Trigger: CAGACGCAAGCTATGAGGCCATGAGTCAGGACCTTC...GAGGGTCCAGGAGTACAGAAGTGGCCCAACACTTTTAATGAATAAAGACAGTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000046999.12 ENSMUST00000123227.3 ENSMUST00000149778.2 ENSMUST00000154469.8 |
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| CDS-3UTR GCA 90 bp | AAGAGTCGCCTAATCTCTGAGTGGTGGCTGGGTTGTACATATGTAGAATTTCCATTATGTCCTCTGCAGTaGCAGGAGCATGGCTGTCTT | + |
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Preference number: 4 (lower is better) Translates to: KSRLISEWWLGCTYVEFPLCPLQ*QEHGCL Trigger: AAGACAGCCATGCTCCTGGCACTGCAGAGGACATAA...TGGAAATTCTACATATGTACAACCCAGCCACCACTCAGAGATTAGGCGACTCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148831.3 |
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| CDS GCA 90 bp | CCGGGCATCCACCGTCAGCACCCTCCGGCCAGTCCTCTGAACCATTaGCTTGGCGAGGGAGTTGAAGTTGGTTTTGCTGCCGAAGAGCCC | + |
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Preference number: 5 (lower is better) Translates to: PGIHRQHPPASPLNH*LGEGVEVGFAAEEP Trigger: GGGCTCTTCGGCAGCAAAACCAACTTCAACTCCCTCGCCAAGGCAATGGTTCAGAGGACTGGCCGGAGGGTGCTGACGGTGGATGCCCGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046999.12 ENSMUST00000123227.3 |
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| CDS GCA 90 bp | CTGTGGAAGGAGGCCCTGAAGGTCCTGACTCATGGCCTCATAGCTTaGGTCTGGACTGTGGGGGCTGTCACCGTGGTTCCGGGCATCCAC | + |
|
Preference number: 5 (lower is better) Translates to: LWKEALKVLTHGLIA*VWTVGAVTVVPGIH Trigger: GTGGATGCCCGGAACCACGGTGACAGCCCCCACAGTCCAGACGCAAGCTATGAGGCCATGAGTCAGGACCTTCAGGGCCTCCTTCCACAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000046999.12 ENSMUST00000111216.8 ENSMUST00000123227.3 ENSMUST00000148831.3 ENSMUST00000149778.2 ENSMUST00000154469.8 |
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| CDS CCA 90 bp | AAGGAGGCCCTGAAGGTCCTGACTCATGGCCTCATAGCTTGCGTCTaGACTGTGGGGGCTGTCACCGTGGTTCCGGGCATCCACCGTCAG | + |
|
Preference number: 5 (lower is better) Translates to: KEALKVLTHGLIACV*TVGAVTVVPGIHRQ Trigger: CTGACGGTGGATGCCCGGAACCACGGTGACAGCCCCCACAGTCCAGACGCAAGCTATGAGGCCATGAGTCAGGACCTTCAGGGCCTCCTT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000046999.12 ENSMUST00000111216.8 ENSMUST00000123227.3 ENSMUST00000148831.3 ENSMUST00000149778.2 ENSMUST00000154469.8 |
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| CDS CCA 90 bp | TCCCATGCTGTGGCCAACGAGGACGCAGGGCACCAGACCCAGCTGTaGAAGGAGGCCCTGAAGGTCCTGACTCATGGCCTCATAGCTTGC | + |
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Preference number: 5 (lower is better) Translates to: SHAVANEDAGHQTQL*KEALKVLTHGLIAC Trigger: GCAAGCTATGAGGCCATGAGTCAGGACCTTCAGGGCCTCCTTCCACAGCTGGGTCTGGTGCCCTGCGTCCTCGTTGGCCACAGCATGGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000046999.12 ENSMUST00000111216.8 ENSMUST00000123227.3 ENSMUST00000148831.3 ENSMUST00000149778.2 ENSMUST00000154469.8 |
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| CDS CCA 90 bp | GAGGACCCAGATAGGTGTAGCTTACCCTCTGCAGTGCCAGGAGCATaGCTGTCTTTCCTCCCATGCTGTGGCCAACGAGGACGCAGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: EDPDRCSLPSAVPGA*LSFLPCCGQRGRRA Trigger: TGCCCTGCGTCCTCGTTGGCCACAGCATGGGAGGAAAGACAGCCATGCTCCTGGCACTGCAGAGGGTAAGCTACACCTATCTGGGTCCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000123227.3 ENSMUST00000149778.2 |
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| CDS-3UTR CAA 90 bp | CTCCTGGACCCTCTCCGTGCCCCTGAGTTTTTCTGTGCAGAAGCAAGATGGCACCGCCAGTTTTCGGGCTaGGGAGTGCGGCACCTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: LLDPLRAPEFFCAEARWHRQFSG*GVRHLL Trigger: GAGAAGGTGCCGCACTCCCAAGCCCGAAAACTGGCG...GTGCCATCTTGCTTCTGCACAGAAAAACTCAGGGGCACGGAGAGGGTCCAGGAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000046999.12 ENSMUST00000111216.8 ENSMUST00000154469.8 |
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| CDS-3UTR CAA 90 bp | TCCCATAGCTGGTGGTGGGCAAAGCATGCCCCTTCCTATGGTCCCACACCGGCTGCGAGGGAGTTGAAGTaGGTTTTGCTGCCGAAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: SHSWWWAKHAPSYGPTPAARELK*VLLPKS Trigger: GCTCTTCGGCAGCAAAACCAACTTCAACTCCCTCGC...AGCCGGTGTGGGACCATAGGAAGGGGCATGCTTTGCCCACCACCAGCTATGGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123227.3 |
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| CDS-3UTR CAA 90 bp | CTCCGTGCCCCTGAGTTTTTCTGTGCAGAAGCAAGATGGCACAGATCCCAAGCCCGCCAGTTTTCGGGCTaGGGAGTGCGGCACCTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: LRAPEFFCAEARWHRSQARQFSG*GVRHLL Trigger: GAGAAGGTGCCGCACTCCCAAGCCCGAAAACTGGCG...GGCTTGGGATCTGTGCCATCTTGCTTCTGCACAGAAAAACTCAGGGGCACGGAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000046999.12 ENSMUST00000111216.8 ENSMUST00000154469.8 |
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| CDS TCA 90 bp | GCACCCTCCGGCCAGTCCTCTGAACCATTGCCTTGGCGAGGGAGTTaGAGTTGGTTTTGCTGCCGAAGAGCCCATGCAAAAAGACGATGG | + |
|
Preference number: 5 (lower is better) Translates to: APSGQSSEPLPWRGS*SWFCCRRAHAKRRW Trigger: CCATCGTCTTTTTGCATGGGCTCTTCGGCAGCAAAACCAACTTCAACTCCCTCGCCAAGGCAATGGTTCAGAGGACTGGCCGGAGGGTGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046999.12 ENSMUST00000123227.3 |
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| CDS GCA 90 bp | GAGTGCATTAAGAGGACCCAGATAGGTGTAGCTTACCCTCTGCAGTaGCAGGAGCATGGCTGTCTTTCCTCCCATGCTGTGGCCAACGAG | + |
|
Preference number: 5 (lower is better) Translates to: ECIKRTQIGVAYPLQ*QEHGCLSSHAVANE Trigger: CTCGTTGGCCACAGCATGGGAGGAAAGACAGCCATGCTCCTGGCACTGCAGAGGGTAAGCTACACCTATCTGGGTCCTCTTAATGCACTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000123227.3 ENSMUST00000149778.2 |
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| CDS-3UTR CAA 90 bp | AGCAAGATGGCACAGATCCCAAGCCTAGAGTCCCCTGGCTGCTCTTCCAAGGAGGAGTTGAAGTTGGTTTaGCTGCCGAAGAGCCCATGC | + |
|
Preference number: 5 (lower is better) Translates to: SKMAQIPSLESPGCSSKEELKLV*LPKSPC Trigger: GCATGGGCTCTTCGGCAGCAAAACCAACTTCAACTC...CTCCTTGGAAGAGCAGCCAGGGGACTCTAGGCTTGGGATCTGTGCCATCTTGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046999.12 ENSMUST00000123227.3 |
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| CDS-3UTR CAA 90 bp | TCTGTGCAGAAGCAAGATGGCACAGATCCCAAGCCTAGAGTCCCCTGGCTGCTCGGTCTGAATCTGGGCTaGAGGGAAGAGTCGCCTAAT | + |
|
Preference number: 5 (lower is better) Translates to: SVQKQDGTDPKPRVPWLLGLNLG*REESPN Trigger: ATTAGGCGACTCTTCCCTCAAGCCCAGATTCAGACC...GAGCAGCCAGGGGACTCTAGGCTTGGGATCTGTGCCATCTTGCTTCTGCACAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046999.12 ENSMUST00000111216.8 ENSMUST00000154469.8 |
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| CDS GCA 90 bp | GCCTTGGCGAGGGAGTTGAAGTTGGTTTTGCTGCCGAAGAGCCCATaGAAAAAGACGATGGCTGGGAGTGTCGCGTCTCCATCTAGAAGA | + |
|
Preference number: 5 (lower is better) Translates to: ALARELKLVLLPKSP*KKTMAGSVASPSRR Trigger: TCTTCTAGATGGAGACGCGACACTCCCAGCCATCGTCTTTTTGCATGGGCTCTTCGGCAGCAAAACCAACTTCAACTCCCTCGCCAAGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046999.12 ENSMUST00000123227.3 |
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| CDS GCA 90 bp | GGGCTTATGTCTACAACAACCAATCGTTCCACAACATCTGGCCTCTaGAGTGCCAGGAGCATGGCTGTCTTTCCTCCCATGCTGTGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: GLMSTTTNRSTTSGL*SARSMAVFPPMLWP Trigger: TGGCCACAGCATGGGAGGAAAGACAGCCATGCTCCTGGCACTGCAGAGGCCAGATGTTGTGGAACGATTGGTTGTTGTAGACATAAGCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046999.12 ENSMUST00000111216.8 ENSMUST00000154469.8 |
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| CDS-3UTR CAA 90 bp | TTTTCTGTGCAGAAGCAAGATGGCACAGATCCCAAGCCTAGAGTCCCCTGGCTGGCGAGGGAGTTGAAGTaGGTTTTGCTGCCGAAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: FSVQKQDGTDPKPRVPWLARELK*VLLPKS Trigger: GCTCTTCGGCAGCAAAACCAACTTCAACTCCCTCGC...CAGCCAGGGGACTCTAGGCTTGGGATCTGTGCCATCTTGCTTCTGCACAGAAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000046999.12 ENSMUST00000123227.3 |
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| CDS-3UTR CAA 90 bp | AGTTTTTCTGTGCAGAAGCAAGATGGCACAGATCCCAAGCCTAGAGTCCCCTGGGCCTTGGCGAGGGAGTaGAAGTTGGTTTTGCTGCCG | + |
|
Preference number: 5 (lower is better) Translates to: SFSVQKQDGTDPKPRVPWALARE*KLVLLP Trigger: CGGCAGCAAAACCAACTTCAACTCCCTCGCCAAGGC...CCAGGGGACTCTAGGCTTGGGATCTGTGCCATCTTGCTTCTGCACAGAAAAACT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000046999.12 ENSMUST00000123227.3 |
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| CDS-3UTR CAA 90 bp | TCCTGGACCCTCTCCGTGCCCCTGAGTTTTTCTGTGCAGAAGCAAGATGGCACAGGTCTGAATCTGGGCTaGAGGGAAGAGTCGCCTAAT | + |
|
Preference number: 5 (lower is better) Translates to: SWTLSVPLSFSVQKQDGTGLNLG*REESPN Trigger: ATTAGGCGACTCTTCCCTCAAGCCCAGATTCAGACC...TGTGCCATCTTGCTTCTGCACAGAAAAACTCAGGGGCACGGAGAGGGTCCAGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000046999.12 ENSMUST00000111216.8 ENSMUST00000154469.8 |
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| CDS-3UTR CAA 90 bp | TCCGTGCCCCTGAGTTTTTCTGTGCAGAAGCAAGATGGCACAGATCCCAAGCCTGAGTTGAAGTTGGTTTaGCTGCCGAAGAGCCCATGC | + |
|
Preference number: 5 (lower is better) Translates to: SVPLSFSVQKQDGTDPKPELKLV*LPKSPC Trigger: GCATGGGCTCTTCGGCAGCAAAACCAACTTCAACTC...AGGCTTGGGATCTGTGCCATCTTGCTTCTGCACAGAAAAACTCAGGGGCACGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046999.12 ENSMUST00000123227.3 |
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| CDS-3UTR CAA 90 bp | ACTTCTGTACTCCTGGACCCTCTCCGTGCCCCTGAGTTTTTCTGTGCAGAAGCAGGTCTGAATCTGGGCTaGAGGGAAGAGTCGCCTAAT | + |
|
Preference number: 5 (lower is better) Translates to: TSVLLDPLRAPEFFCAEAGLNLG*REESPN Trigger: ATTAGGCGACTCTTCCCTCAAGCCCAGATTCAGACC...TGCTTCTGCACAGAAAAACTCAGGGGCACGGAGAGGGTCCAGGAGTACAGAAGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000046999.12 ENSMUST00000111216.8 ENSMUST00000154469.8 |
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| CDS-3UTR CAA 90 bp | AAGGGGAACTGTCTTTATTCATTAAAAGTGTTGGGCCACTTCTGTACTCCTGGACGCCAGTTTTCGGGCTaGGGAGTGCGGCACCTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: KGNCLYSLKVLGHFCTPGRQFSG*GVRHLL Trigger: GAGAAGGTGCCGCACTCCCAAGCCCGAAAACTGGCG...TCCAGGAGTACAGAAGTGGCCCAACACTTTTAATGAATAAAGACAGTTCCCCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000046999.12 ENSMUST00000154469.8 |
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| CDS CCA 72 bp | GTGGCCAACGAGGACGCAGGGCACCAGACCCAGCTGTaGAAGGAGGCCCTGAAGGTCCTGACTCATGGCCTC | + |
|
Preference number: 6 (lower is better) Translates to: VANEDAGHQTQL*KEALKVLTHGL Trigger: GAGGCCATGAGTCAGGACCTTCAGGGCCTCCTTCCACAGCTGGGTCTGGTGCCCTGCGTCCTCGTTGGCCAC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000046999.12 ENSMUST00000111216.8 ENSMUST00000123227.3 ENSMUST00000148831.3 ENSMUST00000149778.2 ENSMUST00000154469.8 |
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| CDS GCA 72 bp | GAGGCCCTGAAGGTCCTGACTCATGGCCTCATAGCTTaGGTCTGGACTGTGGGGGCTGTCACCGTGGTTCCG | + |
|
Preference number: 6 (lower is better) Translates to: EALKVLTHGLIA*VWTVGAVTVVP Trigger: CGGAACCACGGTGACAGCCCCCACAGTCCAGACGCAAGCTATGAGGCCATGAGTCAGGACCTTCAGGGCCTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000046999.12 ENSMUST00000111216.8 ENSMUST00000123227.3 ENSMUST00000148831.3 ENSMUST00000149778.2 ENSMUST00000154469.8 |
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| CDS CAA 72 bp | GGAGGCCCTGAAGGTCCTGACTCATGGCCTCATAGCTaGCGTCTGGACTGTGGGGGCTGTCACCGTGGTTCC | + |
|
Preference number: 6 (lower is better) Translates to: GGPEGPDSWPHS*RLDCGGCHRGS Trigger: GGAACCACGGTGACAGCCCCCACAGTCCAGACGCAAGCTATGAGGCCATGAGTCAGGACCTTCAGGGCCTCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000046999.12 ENSMUST00000111216.8 ENSMUST00000123227.3 ENSMUST00000148831.3 ENSMUST00000149778.2 ENSMUST00000154469.8 |
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| CDS TCA 72 bp | CGGGCATCCACCGTCAGCACCCTCCGGCCAGTCCTCTaGACCATTGCCTTGGCGAGGGAGTTGAAGTTGGTT | + |
|
Preference number: 6 (lower is better) Translates to: RASTVSTLRPVL*TIALARELKLV Trigger: AACCAACTTCAACTCCCTCGCCAAGGCAATGGTTCAGAGGACTGGCCGGAGGGTGCTGACGGTGGATGCCCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046999.12 ENSMUST00000123227.3 |
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| CDS CCA 72 bp | CTGAAGGTCCTGACTCATGGCCTCATAGCTTGCGTCTaGACTGTGGGGGCTGTCACCGTGGTTCCGGGCATC | + |
|
Preference number: 6 (lower is better) Translates to: LKVLTHGLIACV*TVGAVTVVPGI Trigger: GATGCCCGGAACCACGGTGACAGCCCCCACAGTCCAGACGCAAGCTATGAGGCCATGAGTCAGGACCTTCAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000046999.12 ENSMUST00000111216.8 ENSMUST00000123227.3 ENSMUST00000148831.3 ENSMUST00000149778.2 ENSMUST00000154469.8 |
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| CDS TCA 72 bp | CGTTTTCTTGGCCACTACTGCGGCTGCTACAGAACGTaGCAGGAACCGCCAAACGCCTGGGAGAGGAGGCAC | + |
|
Preference number: 6 (lower is better) Translates to: RFLGHYCGCYRT*QEPPNAWERRH Trigger: GTGCCTCCTCTCCCAGGCGTTTGGCGGTTCCTGTCACGTTCTGTAGCAGCCGCAGTAGTGGCCAAGAAAACG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046999.12 ENSMUST00000123227.3 ENSMUST00000201890.2 |
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| CDS GCA 72 bp | CACCGTCAGCACCCTCCGGCCAGTCCTCTGAACCATTaGCTTGGCGAGGGAGTTGAAGTTGGTTTTGCTGCC | + |
|
Preference number: 6 (lower is better) Translates to: HRQHPPASPLNH*LGEGVEVGFAA Trigger: GGCAGCAAAACCAACTTCAACTCCCTCGCCAAGGCAATGGTTCAGAGGACTGGCCGGAGGGTGCTGACGGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046999.12 ENSMUST00000123227.3 |
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| CDS CAA 72 bp | ATAAGACAGCGGCAGCGGCCTCAGATCGGCGTTTTCTaGGCCACTACTGCGGCTGCTACAGAACGTGACAGG | + |
|
Preference number: 6 (lower is better) Translates to: IRQRQRPQIGVF*ATTAAATERDR Trigger: CCTGTCACGTTCTGTAGCAGCCGCAGTAGTGGCCAAGAAAACGCCGATCTGAGGCCGCTGCCGCTGTCTTAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046999.12 ENSMUST00000123227.3 |
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| CDS CAA 72 bp | GGGAGTGTCGCGTCTCCATCTCAGATCGGCGTTTTCTaGGCCACTACTGCGGCTGCTACAGAACGTGACAGG | + |
|
Preference number: 6 (lower is better) Translates to: GSVASPSQIGVF*ATTAAATERDR Trigger: CCTGTCACGTTCTGTAGCAGCCGCAGTAGTGGCCAAGAAAACGCCGATCTGAGATGGAGACGCGACACTCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201890.2 |
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| CDS GCA 72 bp | AAGAGGACCCAGATAGGTGTAGCTTACCCTCTGCAGTaGCAGGAGCATGGCTGTCTTTCCTCCCATGCTGTG | + |
|
Preference number: 6 (lower is better) Translates to: KRTQIGVAYPLQ*QEHGCLSSHAV Trigger: CACAGCATGGGAGGAAAGACAGCCATGCTCCTGGCACTGCAGAGGGTAAGCTACACCTATCTGGGTCCTCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000123227.3 ENSMUST00000149778.2 |
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| CDS TCA 72 bp | GGCCAGTCCTCTGAACCATTGCCTTGGCGAGGGAGTTaGAGTTGGTTTTGCTGCCGAAGAGCCCATGCAAAA | + |
|
Preference number: 6 (lower is better) Translates to: GQSSEPLPWRGS*SWFCCRRAHAK Trigger: TTTTGCATGGGCTCTTCGGCAGCAAAACCAACTTCAACTCCCTCGCCAAGGCAATGGTTCAGAGGACTGGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046999.12 ENSMUST00000123227.3 |
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| CDS GCA 72 bp | AGGGAGTTGAAGTTGGTTTTGCTGCCGAAGAGCCCATaGAAAAAGACGATGGCTGGGAGTGTCGCGTCTCCA | + |
|
Preference number: 6 (lower is better) Translates to: RELKLVLLPKSP*KKTMAGSVASP Trigger: TGGAGACGCGACACTCCCAGCCATCGTCTTTTTGCATGGGCTCTTCGGCAGCAAAACCAACTTCAACTCCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046999.12 ENSMUST00000123227.3 |
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| CDS GCA 72 bp | TCTACAACAACCAATCGTTCCACAACATCTGGCCTCTaGAGTGCCAGGAGCATGGCTGTCTTTCCTCCCATG | + |
|
Preference number: 6 (lower is better) Translates to: STTTNRSTTSGL*SARSMAVFPPM Trigger: CATGGGAGGAAAGACAGCCATGCTCCTGGCACTGCAGAGGCCAGATGTTGTGGAACGATTGGTTGTTGTAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046999.12 ENSMUST00000111216.8 ENSMUST00000154469.8 |
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| CDS CCA 72 bp | TGGTTTTGCTGCCGAAGAGCCCATGCAAAAAGACGATaGCTGGGAGTGTCGCGTCTCCATCTAGAAGATTAT | + |
|
Preference number: 6 (lower is better) Translates to: WFCCRRAHAKRR*LGVSRLHLEDY Trigger: ATAATCTTCTAGATGGAGACGCGACACTCCCAGCCATCGTCTTTTTGCATGGGCTCTTCGGCAGCAAAACCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046999.12 ENSMUST00000123227.3 |
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