Pregenerated sensors for ABHD10 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000033157Ensembl transcript IDs: ENSMUST00000066983.13, ENSMUST00000128348.3
Found 79 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCGCGACCTGCAGGGATCTCTGCCAAGGAACTATTTCATCCTTCATaGCGTGGAGCAAGCGTACAGGGCAGGTCACAGGGATGGGGCTAT | + |
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Preference number: 1 (lower is better) Translates to: PRPAGISAKELFHPS*RGASVQGRSQGWGY Trigger: ATAGCCCCATCCCTGTGACCTGCCCTGTACGCTTGCTCCACGGCATGAAGGATGAAATAGTTCCTTGGCAGAGATCCCTGCAGGTCGCGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128348.3 |
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| 3UTR CCA 90 bp | ACCTGCAGGGATCTCTGCCAAGGAACTATTTCATCCTTCATGCCGTaGAGCAAGCGTACAGGGCAGGTCACAGGGATGGGGCTATGCAAC | + |
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Preference number: 1 (lower is better) Translates to: TCRDLCQGTISSFMP*SKRTGQVTGMGLCN Trigger: GTTGCATAGCCCCATCCCTGTGACCTGCCCTGTACGCTTGCTCCACGGCATGAAGGATGAAATAGTTCCTTGGCAGAGATCCCTGCAGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128348.3 |
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| 3UTR GCA 90 bp | CGGAGGATGACATCTACATCTGGGCTGACTATTCGGTCCGCGACCTaGAGGGATCTCTGCCAAGGAACTATTTCATCCTTCATGCCGTGG | + |
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Preference number: 1 (lower is better) Translates to: RRMTSTSGLTIRSAT*RDLCQGTISSFMPW Trigger: CCACGGCATGAAGGATGAAATAGTTCCTTGGCAGAGATCCCTGCAGGTCGCGGACCGAATAGTCAGCCCAGATGTAGATGTCATCCTCCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128348.3 |
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| 3UTR CCA 90 bp | CTTCATCCTGTGATCACCTTGTTTCCGGAGGATGACATCTACATCTaGGCTGACTATTCGGTCCGCGACCTGCAGGGATCTCTGCCAAGG | + |
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Preference number: 1 (lower is better) Translates to: LHPVITLFPEDDIYI*ADYSVRDLQGSLPR Trigger: CCTTGGCAGAGATCCCTGCAGGTCGCGGACCGAATAGTCAGCCCAGATGTAGATGTCATCCTCCGGAAACAAGGTGATCACAGGATGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128348.3 |
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| 3UTR GCA 90 bp | TGCAGCAGTAGCTATACCAATAAGAGCTATGACTTTTTCCGGCCGTaGAATTGCAGCATGCAGCATGAGCCATCCACCAAGACTGGATCC | + |
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Preference number: 1 (lower is better) Translates to: CSSSYTNKSYDFFRP*NCSMQHEPSTKTGS Trigger: GGATCCAGTCTTGGTGGATGGCTCATGCTGCATGCTGCAATTGCACGGCCGGAAAAAGTCATAGCTCTTATTGGTATAGCTACTGCTGCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000128348.3 |
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| 3UTR GCA 90 bp | ATACCAATAAGAGCTATGACTTTTTCCGGCCGTGCAATTGCAGCATaGAGCATGAGCCATCCACCAAGACTGGATCCAACCAGTATCTGC | + |
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Preference number: 1 (lower is better) Translates to: IPIRAMTFSGRAIAA*SMSHPPRLDPTSIC Trigger: GCAGATACTGGTTGGATCCAGTCTTGGTGGATGGCTCATGCTGCATGCTGCAATTGCACGGCCGGAAAAAGTCATAGCTCTTATTGGTAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000128348.3 |
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| 3UTR GCA 90 bp | AGTAGCTATACCAATAAGAGCTATGACTTTTTCCGGCCGTGCAATTaGAGCATGCAGCATGAGCCATCCACCAAGACTGGATCCAACCAG | + |
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Preference number: 1 (lower is better) Translates to: SSYTNKSYDFFRPCN*SMQHEPSTKTGSNQ Trigger: CTGGTTGGATCCAGTCTTGGTGGATGGCTCATGCTGCATGCTGCAATTGCACGGCCGGAAAAAGTCATAGCTCTTATTGGTATAGCTACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000128348.3 |
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| 3UTR GCA 90 bp | CCAAGTACTGGGATTAAAGGAGTAGGCCAGCACCTCAACAGGAAGTaGATGATATTGTGTCACCAATCCATCTGCAGCAGTAGCTATACC | + |
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Preference number: 1 (lower is better) Translates to: PSTGIKGVGQHLNRK*MILCHQSICSSSYT Trigger: GGTATAGCTACTGCTGCAGATGGATTGGTGACACAATATCATGCACTTCCTGTTGAGGTGCTGGCCTACTCCTTTAATCCCAGTACTTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128348.3 |
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| 3UTR GCA 90 bp | CAGCACCTCAACAGGAAGTGCATGATATTGTGTCACCAATCCATCTaGAGCAGTAGCTATACCAATAAGAGCTATGACTTTTTCCGGCCG | + |
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Preference number: 1 (lower is better) Translates to: QHLNRKCMILCHQSI*SSSYTNKSYDFFRP Trigger: CGGCCGGAAAAAGTCATAGCTCTTATTGGTATAGCTACTGCTGCAGATGGATTGGTGACACAATATCATGCACTTCCTGTTGAGGTGCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000128348.3 |
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| 3UTR TCA 90 bp | CTTTCAATCTTCTGGATGCACTGGAGGGCATTCCAGCTACAAATGTaGTTCTACGGAACTACAGTTGAAAGCTTGTCAATCAAGTCATCA | + |
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Preference number: 1 (lower is better) Translates to: LSIFWMHWRAFQLQM*FYGTTVESLSIKSS Trigger: TGATGACTTGATTGACAAGCTTTCAACTGTAGTTCCGTAGAATCACATTTGTAGCTGGAATGCCCTCCAGTGCATCCAGAAGATTGAAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128348.3 |
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| 3UTR TCA 90 bp | CTGGAGGGCATTCCAGCTACAAATGTGATTCTACGGAACTACAGTTaGAAGCTTGTCAATCAAGTCATCAATAGTACAAATAAGCAGATG | + |
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Preference number: 1 (lower is better) Translates to: LEGIPATNVILRNYS*KLVNQVINSTNKQM Trigger: CATCTGCTTATTTGTACTATTGATGACTTGATTGACAAGCTTTCAACTGTAGTTCCGTAGAATCACATTTGTAGCTGGAATGCCCTCCAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128348.3 |
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| 3UTR CCA 90 bp | TCATGTTTCCTTACTGACTCTACCCTTCTGCCACTTAAACTAAAATaGTACCTACCCATCTATTTGCACTTATGCCAGTCTAATCGTATT | + |
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Preference number: 1 (lower is better) Translates to: SCFLTDSTLLPLKLK*YLPIYLHLCQSNRI Trigger: AATACGATTAGACTGGCATAAGTGCAAATAGATGGGTAGGTACCATTTTAGTTTAAGTGGCAGAAGGGTAGAGTCAGTAAGGAAACATGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066983.13 |
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| 3UTR TCA 90 bp | AATAAATACGTATCCGATATTTACAAACTACAAGAGGGAAAACCCTaGAGTATCCGGGTCTTTGATTTACTACCACACTTTCAATCTTCT | + |
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Preference number: 1 (lower is better) Translates to: NKYVSDIYKLQEGKP*SIRVFDLLPHFQSS Trigger: AGAAGATTGAAAGTGTGGTAGTAAATCAAAGACCCGGATACTTCAGGGTTTTCCCTCTTGTAGTTTGTAAATATCGGATACGTATTTATT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066983.13 |
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| 3UTR-3UTR TCA 90 bp | TTTCATCCTTCATGCCGTGGAGCAAGCGTACAGGGCAGGTCACAGGGATGGGGCTTGCAGCATGCAGCATaGGCCATCCACCAAGACTGG | + |
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Preference number: 2 (lower is better) Translates to: FHPSCRGASVQGRSQGWGLQHAA*AIHQDW Trigger: CCAGTCTTGGTGGATGGCTCATGCTGCATGCTGCAA...GCCCCATCCCTGTGACCTGCCCTGTACGCTTGCTCCACGGCATGAAGGATGAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128348.3 |
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| 3UTR-3UTR GCA 90 bp | TCACCTTGTTTCCGGAGGATGACATCTACATCTGGGCTGACTATTCGGTCCGCGCGTGCAATTGCAGCATaGAGCATGAGCCATCCACCA | + |
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Preference number: 2 (lower is better) Translates to: SPCFRRMTSTSGLTIRSARAIAA*SMSHPP Trigger: TGGTGGATGGCTCATGCTGCATGCTGCAATTGCACG...CGCGGACCGAATAGTCAGCCCAGATGTAGATGTCATCCTCCGGAAACAAGGTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128348.3 |
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| 3UTR-3UTR TCA 90 bp | GTCGGTGCCAAGGGGTTTACTGGACCACTCAGAGGGAGTCGCTGCTCCACATATTTCATGTTTCCTTACTaGCTCTACCCTTCTGCCACT | + |
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Preference number: 2 (lower is better) Translates to: VGAKGFTGPLRGSRCSTYFMFPY*LYPSAT Trigger: AGTGGCAGAAGGGTAGAGTCAGTAAGGAAACATGAA...ATATGTGGAGCAGCGACTCCCTCTGAGTGGTCCAGTAAACCCCTTGGCACCGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066983.13 |
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| 3UTR-3UTR CCA 90 bp | CCTGTGATCACCTTGTTTCCGGAGGATGACATCTACATCTGGGCTGACTATTCGTCATCCTTCATGCCGTaGAGCAAGCGTACAGGGCAG | + |
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Preference number: 2 (lower is better) Translates to: PVITLFPEDDIYIWADYSSSFMP*SKRTGQ Trigger: CTGCCCTGTACGCTTGCTCCACGGCATGAAGGATGA...CGAATAGTCAGCCCAGATGTAGATGTCATCCTCCGGAAACAAGGTGATCACAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128348.3 |
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| 3UTR-3UTR TCA 90 bp | TCACCTTGTTTCCGGAGGATGACATCTACATCTGGGCTGACTATTCGGTCCGCGCTATGCAACAAGCAGTaGTGCTCCGCTTCTTTAATG | + |
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Preference number: 2 (lower is better) Translates to: SPCFRRMTSTSGLTIRSALCNKQ*CSASLM Trigger: CATTAAAGAAGCGGAGCATCACTGCTTGTTGCATAG...CGCGGACCGAATAGTCAGCCCAGATGTAGATGTCATCCTCCGGAAACAAGGTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128348.3 |
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| 3UTR-3UTR GCA 90 bp | GTCGGTGCCAAGGGGTTTACTGGACCACTCAGAGGGAGTCGCTGCTCCACATATACCTACCCATCTATTTaGACTTATGCCAGTCTAATC | + |
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Preference number: 2 (lower is better) Translates to: VGAKGFTGPLRGSRCSTYTYPSI*TYASLI Trigger: GATTAGACTGGCATAAGTGCAAATAGATGGGTAGGT...ATATGTGGAGCAGCGACTCCCTCTGAGTGGTCCAGTAAACCCCTTGGCACCGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066983.13 |
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| 3UTR-3UTR TCA 90 bp | GTCGGTGCCAAGGGGTTTACTGGACCACTCAGAGGGAGTCGCTGCTCCACATATGGAAAATGGTGGAACTaGGATTATGTAAAGAGAAAC | + |
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Preference number: 2 (lower is better) Translates to: VGAKGFTGPLRGSRCSTYGKWWN*DYVKRN Trigger: GTTTCTCTTTACATAATCTCAGTTCCACCATTTTCC...ATATGTGGAGCAGCGACTCCCTCTGAGTGGTCCAGTAAACCCCTTGGCACCGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066983.13 |
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| 3UTR-3UTR GCA 90 bp | CAGCACCTCAACAGGAAGTGCATGATATTGTGTCACCAATCCATCTGCAGCAGTGACTTTTTCCGGCCGTaGAATTGCAGCATGCAGCAT | + |
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Preference number: 2 (lower is better) Translates to: QHLNRKCMILCHQSICSSDFFRP*NCSMQH Trigger: ATGCTGCATGCTGCAATTGCACGGCCGGAAAAAGTC...ACTGCTGCAGATGGATTGGTGACACAATATCATGCACTTCCTGTTGAGGTGCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000128348.3 |
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| 3UTR-3UTR GCA 90 bp | TCTGCCAAGGAACTATTTCATCCTTCATGCCGTGGAGCAAGCGTACAGGGCAGGTGTCACCAATCCATCTaGAGCAGTAGCTATACCAAT | + |
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Preference number: 2 (lower is better) Translates to: SAKELFHPSCRGASVQGRCHQSI*SSSYTN Trigger: ATTGGTATAGCTACTGCTGCAGATGGATTGGTGACA...CCTGCCCTGTACGCTTGCTCCACGGCATGAAGGATGAAATAGTTCCTTGGCAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128348.3 |
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| 3UTR-3UTR CCA 90 bp | CTACCACACTTTCAATCTTCTGGATGCACTGGAGGGCATTCCAGCTACAAATGTGCCATCCACCAAGACTaGATCCAACCAGTATCTGCG | + |
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Preference number: 2 (lower is better) Translates to: LPHFQSSGCTGGHSSYKCAIHQD*IQPVSA Trigger: CGCAGATACTGGTTGGATCCAGTCTTGGTGGATGGC...ACATTTGTAGCTGGAATGCCCTCCAGTGCATCCAGAAGATTGAAAGTGTGGTAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128348.3 |
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| 3UTR-3UTR TCA 90 bp | ATCACCTTGTTTCCGGAGGATGACATCTACATCTGGGCTGACTATTCGGTCCGCATTTCTATTTCCTTTTaGGTCTCTGTCTCCCAAGTA | + |
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Preference number: 2 (lower is better) Translates to: ITLFPEDDIYIWADYSVRISISF*VSVSQV Trigger: TACTTGGGAGACAGAGACTCAAAAGGAAATAGAAAT...GCGGACCGAATAGTCAGCCCAGATGTAGATGTCATCCTCCGGAAACAAGGTGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128348.3 |
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| 3UTR-3UTR CCA 90 bp | TCCAGCTACAAATGTGATTCTACGGAACTACAGTTGAAAGCTTGTCAATCAAGTGGCAGGTCACAGGGATaGGGCTATGCAACAAGCAGT | + |
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Preference number: 2 (lower is better) Translates to: SSYKCDSTELQLKACQSSGRSQG*GYATSS Trigger: ACTGCTTGTTGCATAGCCCCATCCCTGTGACCTGCC...ACTTGATTGACAAGCTTTCAACTGTAGTTCCGTAGAATCACATTTGTAGCTGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128348.3 |
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| 3UTR-3UTR GCA 90 bp | AAACTGGGTCTCCAGCAAGGAGCTCTAACAGCTCATGTGATACCATCTGCAAGAACTATAGAGCATGTTTaGAGGAAAATGGTGGAACTG | + |
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Preference number: 2 (lower is better) Translates to: KLGLQQGALTAHVIPSARTIEHV*RKMVEL Trigger: CAGTTCCACCATTTTCCTGCAAACATGCTCTATAGT...TCTTGCAGATGGTATCACATGAGCTGTTAGAGCTCCTTGCTGGAGACCCAGTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066983.13 |
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| 3UTR-3UTR TCA 90 bp | CATTCCAGCTACAAATGTGATTCTACGGAACTACAGTTGAAAGCTTGTCAATCATTCTCCTTCATCCTGTaGTCACCTTGTTTCCGGAGG | + |
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Preference number: 2 (lower is better) Translates to: HSSYKCDSTELQLKACQSFSFIL*SPCFRR Trigger: CCTCCGGAAACAAGGTGATCACAGGATGAAGGAGAA...TGATTGACAAGCTTTCAACTGTAGTTCCGTAGAATCACATTTGTAGCTGGAATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128348.3 |
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| 3UTR-3UTR CCA 90 bp | TCCAGCTACAAATGTGATTCTACGGAACTACAGTTGAAAGCTTGTCAATCAAGTGATGACATCTACATCTaGGCTGACTATTCGGTCCGC | + |
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Preference number: 2 (lower is better) Translates to: SSYKCDSTELQLKACQSSDDIYI*ADYSVR Trigger: GCGGACCGAATAGTCAGCCCAGATGTAGATGTCATC...ACTTGATTGACAAGCTTTCAACTGTAGTTCCGTAGAATCACATTTGTAGCTGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128348.3 |
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| 3UTR CAA 90 bp | ATATTTACAAACTACAAGAGGGAAAACCCTGAAGTATCCGGGTCTTaGATTTACTACCACACTTTCAATCTTCTGGATGCACTGGAGGGC | + |
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Preference number: 2 (lower is better) Translates to: IFTNYKRENPEVSGS*IYYHTFNLLDALEG Trigger: GCCCTCCAGTGCATCCAGAAGATTGAAAGTGTGGTAGTAAATCAAAGACCCGGATACTTCAGGGTTTTCCCTCTTGTAGTTTGTAAATAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066983.13 |
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| 3UTR-3UTR TCA 90 bp | TTTTTAAACTGTCCTTTCAACCAGGTTTATTGTCTGCCGACTCTCATTTATGCGCAAGAGGGAAAACCCTaGAGTATCCGGGTCTTTGAT | + |
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Preference number: 2 (lower is better) Translates to: FLNCPFNQVYCLPTLIYAQEGKP*SIRVFD Trigger: ATCAAAGACCCGGATACTTCAGGGTTTTCCCTCTTG...CGCATAAATGAGAGTCGGCAGACAATAAACCTGGTTGAAAGGACAGTTTAAAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066983.13 |
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| 3UTR-3UTR CCA 90 bp | TTTCTCTCATATGTACAGTACAGATTTAACTACACATATATTGCATGGCTGGTGATTAGGGGAGCATGGTaGGGAAGGAAGCAGTATCTG | + |
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Preference number: 2 (lower is better) Translates to: FLSYVQYRFNYTYIAWLVIRGAW*GRKQYL Trigger: CAGATACTGCTTCCTTCCCCACCATGCTCCCCTAAT...CACCAGCCATGCAATATATGTGTAGTTAAATCTGTACTGTACATATGAGAGAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066983.13 |
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| 3UTR-3UTR TCA 90 bp | TCCAGCTACAAATGTGATTCTACGGAACTACAGTTGAAAGCTTGTCAATCAAGTGTACAAATAAGCAGATaGATATCTGCTTTCTCCTTC | + |
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Preference number: 2 (lower is better) Translates to: SSYKCDSTELQLKACQSSVQISR*ISAFSF Trigger: GAAGGAGAAAGCAGATATTCATCTGCTTATTTGTAC...ACTTGATTGACAAGCTTTCAACTGTAGTTCCGTAGAATCACATTTGTAGCTGGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128348.3 |
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| 3UTR-3UTR TCA 90 bp | TTTCTCTCATATGTACAGTACAGATTTAACTACACATATATTGCATGGCTGGTGAAGTATCCGGGTCTTTaGTTTACTACCACACTTTCA | + |
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Preference number: 2 (lower is better) Translates to: FLSYVQYRFNYTYIAWLVKYPGL*FTTTLS Trigger: TGAAAGTGTGGTAGTAAATCAAAGACCCGGATACTT...CACCAGCCATGCAATATATGTGTAGTTAAATCTGTACTGTACATATGAGAGAAA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066983.13 |
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| 3UTR-3UTR GCA 90 bp | TACAAATGTGATTCTACGGAACTACAGTTGAAAGCTTGTCAATCAAGTCATCAAAAGCAGATGAATATCTaGTTTCTCCTTCATCCTGTG | + |
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Preference number: 2 (lower is better) Translates to: YKCDSTELQLKACQSSHQKQMNI*FLLHPV Trigger: CACAGGATGAAGGAGAAAGCAGATATTCATCTGCTT...TTGATGACTTGATTGACAAGCTTTCAACTGTAGTTCCGTAGAATCACATTTGTA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128348.3 |
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| 3UTR-3UTR CCA 90 bp | TTTTTAAACTGTCCTTTCAACCAGGTTTATTGTCTGCCGACTCTCATTTATGCGGAGCAGCTAATACTTTaGTCACAATTTGTGTATTTG | + |
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Preference number: 2 (lower is better) Translates to: FLNCPFNQVYCLPTLIYAEQLIL*SQFVYL Trigger: CAAATACACAAATTGTGACCAAAGTATTAGCTGCTC...CGCATAAATGAGAGTCGGCAGACAATAAACCTGGTTGAAAGGACAGTTTAAAAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066983.13 |
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| 3UTR CCA 72 bp | TGCCGTGGAGCAAGCGTACAGGGCAGGTCACAGGGATaGGGCTATGCAACAAGCAGTGATGCTCCGCTTCTT | + |
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Preference number: 3 (lower is better) Translates to: CRGASVQGRSQG*GYATSSDAPLL Trigger: AAGAAGCGGAGCATCACTGCTTGTTGCATAGCCCCATCCCTGTGACCTGCCCTGTACGCTTGCTCCACGGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128348.3 |
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| 3UTR GCA 72 bp | GCCAAGGGGTTTACTGGACCACTCAGAGGGAGTCGCTaGTCCACATATATCAACACTCTGGGCACCTGGGAA | + |
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Preference number: 3 (lower is better) Translates to: AKGFTGPLRGSR*STYINTLGTWE Trigger: TTCCCAGGTGCCCAGAGTGTTGATATATGTGGAGCAGCGACTCCCTCTGAGTGGTCCAGTAAACCCCTTGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066983.13 |
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| 3UTR GCA 72 bp | GCAGGGATCTCTGCCAAGGAACTATTTCATCCTTCATaGCGTGGAGCAAGCGTACAGGGCAGGTCACAGGGA | + |
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Preference number: 3 (lower is better) Translates to: AGISAKELFHPS*RGASVQGRSQG Trigger: TCCCTGTGACCTGCCCTGTACGCTTGCTCCACGGCATGAAGGATGAAATAGTTCCTTGGCAGAGATCCCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128348.3 |
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| 3UTR CCA 72 bp | GTGATCACCTTGTTTCCGGAGGATGACATCTACATCTaGGCTGACTATTCGGTCCGCGACCTGCAGGGATCT | + |
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Preference number: 3 (lower is better) Translates to: VITLFPEDDIYI*ADYSVRDLQGS Trigger: AGATCCCTGCAGGTCGCGGACCGAATAGTCAGCCCAGATGTAGATGTCATCCTCCGGAAACAAGGTGATCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128348.3 |
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| 3UTR GCA 72 bp | GTGATACCATCTGCAAGAAAGCTTGCTAAGAGTCGGTaGCAAGGGGTTTACTGGACCACTCAGAGGGAGTCG | + |
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Preference number: 3 (lower is better) Translates to: VIPSARKLAKSR*QGVYWTTQRES Trigger: CGACTCCCTCTGAGTGGTCCAGTAAACCCCTTGGCACCGACTCTTAGCAAGCTTTCTTGCAGATGGTATCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066983.13 |
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| 3UTR GCA 72 bp | AGAGCTATGACTTTTTCCGGCCGTGCAATTGCAGCATaGAGCATGAGCCATCCACCAAGACTGGATCCAACC | + |
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Preference number: 3 (lower is better) Translates to: RAMTFSGRAIAA*SMSHPPRLDPT Trigger: GGTTGGATCCAGTCTTGGTGGATGGCTCATGCTGCATGCTGCAATTGCACGGCCGGAAAAAGTCATAGCTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000128348.3 |
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| 3UTR TCA 72 bp | GGGCAGGTCACAGGGATGGGGCTATGCAACAAGCAGTaGTGCTCCGCTTCTTTAATGAAACTGTACGGGATT | + |
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Preference number: 3 (lower is better) Translates to: GQVTGMGLCNKQ*CSASLMKLYGI Trigger: AATCCCGTACAGTTTCATTAAAGAAGCGGAGCATCACTGCTTGTTGCATAGCCCCATCCCTGTGACCTGCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128348.3 |
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| 3UTR-3UTR CAA 90 bp | GTACAGGGCAGGTCACAGGGATGGGGCTATGCAACAAGCAGTGATGCTCCGCTTCATTTCTATTTCCTTTaGAGTCTCTGTCTCCCAAGT | + |
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Preference number: 3 (lower is better) Translates to: VQGRSQGWGYATSSDAPLHFYFL*SLCLPS Trigger: ACTTGGGAGACAGAGACTCAAAAGGAAATAGAAATG...AAGCGGAGCATCACTGCTTGTTGCATAGCCCCATCCCTGTGACCTGCCCTGTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128348.3 |
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| 3UTR GCA 72 bp | ACCAATAAGAGCTATGACTTTTTCCGGCCGTGCAATTaGAGCATGCAGCATGAGCCATCCACCAAGACTGGA | + |
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Preference number: 3 (lower is better) Translates to: TNKSYDFFRPCN*SMQHEPSTKTG Trigger: TCCAGTCTTGGTGGATGGCTCATGCTGCATGCTGCAATTGCACGGCCGGAAAAAGTCATAGCTCTTATTGGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000128348.3 |
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| 3UTR CCA 72 bp | AGTCGCTGCTCCACATATATCAACACTCTGGGCACCTaGGAAGAAAGTGGGGTTCAGCATAAGCCAGTGTTT | + |
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Preference number: 3 (lower is better) Translates to: SRCSTYINTLGT*EESGVQHKPVF Trigger: AAACACTGGCTTATGCTGAACCCCACTTTCTTCCCAGGTGCCCAGAGTGTTGATATATGTGGAGCAGCGACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066983.13 |
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| 3UTR-3UTR CAA 90 bp | TCTCTGCCAAGGAACTATTTCATCCTTCATGCCGTGGAGCAAGCGTACAGGGCAAGGAAGTGCATGATATaGTGTCACCAATCCATCTGC | + |
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Preference number: 3 (lower is better) Translates to: SLPRNYFILHAVEQAYRARKCMI*CHQSIC Trigger: GCAGATGGATTGGTGACACAATATCATGCACTTCCT...TGCCCTGTACGCTTGCTCCACGGCATGAAGGATGAAATAGTTCCTTGGCAGAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128348.3 |
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| 3UTR GCA 72 bp | AGCTATACCAATAAGAGCTATGACTTTTTCCGGCCGTaGAATTGCAGCATGCAGCATGAGCCATCCACCAAG | + |
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Preference number: 3 (lower is better) Translates to: SYTNKSYDFFRP*NCSMQHEPSTK Trigger: CTTGGTGGATGGCTCATGCTGCATGCTGCAATTGCACGGCCGGAAAAAGTCATAGCTCTTATTGGTATAGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000128348.3 |
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| 3UTR GCA 72 bp | GGGATTAAAGGAGTAGGCCAGCACCTCAACAGGAAGTaGATGATATTGTGTCACCAATCCATCTGCAGCAGT | + |
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Preference number: 3 (lower is better) Translates to: GIKGVGQHLNRK*MILCHQSICSS Trigger: ACTGCTGCAGATGGATTGGTGACACAATATCATGCACTTCCTGTTGAGGTGCTGGCCTACTCCTTTAATCCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128348.3 |
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| 3UTR CCA 72 bp | CTTACTGACTCTACCCTTCTGCCACTTAAACTAAAATaGTACCTACCCATCTATTTGCACTTATGCCAGTCT | + |
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Preference number: 3 (lower is better) Translates to: LTDSTLLPLKLK*YLPIYLHLCQS Trigger: AGACTGGCATAAGTGCAAATAGATGGGTAGGTACCATTTTAGTTTAAGTGGCAGAAGGGTAGAGTCAGTAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066983.13 |
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| 3UTR CCA 72 bp | CGGGATTCTGAAATAGCCTTCCTTGTTGTATCTAGATaGCAAGGTCCACTCACCTTTCATTTCTATTTCCTT | + |
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Preference number: 3 (lower is better) Translates to: RDSEIAFLVVSR*QGPLTFHFYFL Trigger: AAGGAAATAGAAATGAAAGGTGAGTGGACCTTGCCATCTAGATACAACAAGGAAGGCTATTTCAGAATCCCG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128348.3 |
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| 3UTR GCA 72 bp | AACAGGAAGTGCATGATATTGTGTCACCAATCCATCTaGAGCAGTAGCTATACCAATAAGAGCTATGACTTT | + |
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Preference number: 3 (lower is better) Translates to: NRKCMILCHQSI*SSSYTNKSYDF Trigger: AAAGTCATAGCTCTTATTGGTATAGCTACTGCTGCAGATGGATTGGTGACACAATATCATGCACTTCCTGTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128348.3 |
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| 3UTR TCA 72 bp | GTATCCGATATTTACAAACTACAAGAGGGAAAACCCTaGAGTATCCGGGTCTTTGATTTACTACCACACTTT | + |
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Preference number: 3 (lower is better) Translates to: VSDIYKLQEGKP*SIRVFDLLPHF Trigger: AAAGTGTGGTAGTAAATCAAAGACCCGGATACTTCAGGGTTTTCCCTCTTGTAGTTTGTAAATATCGGATAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066983.13 |
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| 3UTR CCA 72 bp | AGGAGGACAAAAATTTCCAAAGAGCAGCTAATACTTTaGTCACAATTTGTGTATTTGTGCAAAGACATCATT | + |
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Preference number: 3 (lower is better) Translates to: RRTKISKEQLIL*SQFVYLCKDII Trigger: AATGATGTCTTTGCACAAATACACAAATTGTGACCAAAGTATTAGCTGCTCTTTGGAAATTTTTGTCCTCCT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066983.13 |
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| CDS-3UTR CCA 90 bp | GCAGAGAAGGCTCTAAAGGACATTAGGGGAGCATGGTGGGGAAGGAAGCAGTATGGCAGGTCACAGGGATaGGGCTATGCAACAAGCAGT | + |
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Preference number: 4 (lower is better) Translates to: AEKALKDIRGAWWGRKQYGRSQG*GYATSS Trigger: ACTGCTTGTTGCATAGCCCCATCCCTGTGACCTGCC...ATACTGCTTCCTTCCCCACCATGCTCCCCTAATGTCCTTTAGAGCCTTCTCTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066983.13 |
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| CDS-3UTR TCA 90 bp | GTCGGTGCCAAGGGGTTTACTGGACCACTCAGAGGGAGTCGCTGCTCCACATATCTATGCAACAAGCAGTaGTGCTCCGCTTCTTTAATG | + |
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Preference number: 4 (lower is better) Translates to: VGAKGFTGPLRGSRCSTYLCNKQ*CSASLM Trigger: CATTAAAGAAGCGGAGCATCACTGCTTGTTGCATAG...ATATGTGGAGCAGCGACTCCCTCTGAGTGGTCCAGTAAACCCCTTGGCACCGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066983.13 |
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| CDS-3UTR GCA 90 bp | GCAGAGAAGGCTCTAAAGGACATTAGGGGAGCATGGTGGGGAAGGAAGCAGTATCGTGCAATTGCAGCATaGAGCATGAGCCATCCACCA | + |
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Preference number: 4 (lower is better) Translates to: AEKALKDIRGAWWGRKQYRAIAA*SMSHPP Trigger: TGGTGGATGGCTCATGCTGCATGCTGCAATTGCACG...ATACTGCTTCCTTCCCCACCATGCTCCCCTAATGTCCTTTAGAGCCTTCTCTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066983.13 |
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| CDS-3UTR TCA 90 bp | CTACCACACTTTCAATCTTCTGGATGCACTGGAGGGCATTCCAGCTACAAATGTCTTTTGTCTGCAAGCTaGGAGCCACCATGCCCGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LPHFQSSGCTGGHSSYKCLLSAS*EPPCPW Trigger: CCACGGGCATGGTGGCTCTCAGCTTGCAGACAAAAG...ACATTTGTAGCTGGAATGCCCTCCAGTGCATCCAGAAGATTGAAAGTGTGGTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066983.13 |
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| CDS-3UTR TCA 90 bp | GTCGGTGCCAAGGGGTTTACTGGACCACTCAGAGGGAGTCGCTGCTCCACATATGTACAAATAAGCAGATaGATATCTGCTTTCTCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: VGAKGFTGPLRGSRCSTYVQISR*ISAFSF Trigger: GAAGGAGAAAGCAGATATTCATCTGCTTATTTGTAC...ATATGTGGAGCAGCGACTCCCTCTGAGTGGTCCAGTAAACCCCTTGGCACCGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066983.13 |
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| CDS-3UTR TCA 90 bp | CTACCACACTTTCAATCTTCTGGATGCACTGGAGGGCATTCCAGCTACAAATGTGTTAAGGAAAGAAAGTaGTGCCTTTTGTCTGCAAGC | + |
|
Preference number: 4 (lower is better) Translates to: LPHFQSSGCTGGHSSYKCVKERK*CLLSAS Trigger: GCTTGCAGACAAAAGGCATCACTTTCTTTCCTTAAC...ACATTTGTAGCTGGAATGCCCTCCAGTGCATCCAGAAGATTGAAAGTGTGGTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066983.13 |
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| CDS-3UTR TCA 90 bp | ATTGTAGAAAGGAACACAACTATAGCTGGCACAGCTAAAGTGTATGTAAGAAAGTTGCAGCATGCAGCATaGGCCATCCACCAAGACTGG | + |
|
Preference number: 4 (lower is better) Translates to: IVERNTTIAGTAKVYVRKLQHAA*AIHQDW Trigger: CCAGTCTTGGTGGATGGCTCATGCTGCATGCTGCAA...CTTTCTTACATACACTTTAGCTGTGCCAGCTATAGTTGTGTTCCTTTCTACAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066983.13 |
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| CDS-3UTR GCA 90 bp | CTACCACACTTTCAATCTTCTGGATGCACTGGAGGGCATTCCAGCTACAAATGTTGTCACCAATCCATCTaGAGCAGTAGCTATACCAAT | + |
|
Preference number: 4 (lower is better) Translates to: LPHFQSSGCTGGHSSYKCCHQSI*SSSYTN Trigger: ATTGGTATAGCTACTGCTGCAGATGGATTGGTGACA...ACATTTGTAGCTGGAATGCCCTCCAGTGCATCCAGAAGATTGAAAGTGTGGTAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066983.13 |
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| CDS-3UTR GCA 90 bp | TTTGATTTACTACCACACTTTCAATCTTCTGGATGCACTGGAGGGCATTCCAGCCGTGACCTAGAGATTTaGAAAACTCCTCAACTGCTA | + |
|
Preference number: 4 (lower is better) Translates to: FDLLPHFQSSGCTGGHSSRDLEI*KTPQLL Trigger: TAGCAGTTGAGGAGTTTTGCAAATCTCTAGGTCACG...GCTGGAATGCCCTCCAGTGCATCCAGAAGATTGAAAGTGTGGTAGTAAATCAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066983.13 |
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| CDS-3UTR GCA 90 bp | CTACCACACTTTCAATCTTCTGGATGCACTGGAGGGCATTCCAGCTACAAATGTAAGCAGATGAATATCTaGTTTCTCCTTCATCCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: LPHFQSSGCTGGHSSYKCKQMNI*FLLHPV Trigger: CACAGGATGAAGGAGAAAGCAGATATTCATCTGCTT...ACATTTGTAGCTGGAATGCCCTCCAGTGCATCCAGAAGATTGAAAGTGTGGTAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066983.13 |
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| CDS-3UTR CCA 90 bp | TTTCTCTCATATGTACAGTACAGATTTAACTACACATATATTGCATGGCTGGTGTCATCCTTCATGCCGTaGAGCAAGCGTACAGGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: FLSYVQYRFNYTYIAWLVSSFMP*SKRTGQ Trigger: CTGCCCTGTACGCTTGCTCCACGGCATGAAGGATGA...CACCAGCCATGCAATATATGTGTAGTTAAATCTGTACTGTACATATGAGAGAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066983.13 |
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| CDS-3UTR TCA 90 bp | ATTGTAGAAAGGAACACAACTATAGCTGGCACAGCTAAAGTGTATGTAAGAAAGTTCTCCTTCATCCTGTaGTCACCTTGTTTCCGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: IVERNTTIAGTAKVYVRKFSFIL*SPCFRR Trigger: CCTCCGGAAACAAGGTGATCACAGGATGAAGGAGAA...CTTTCTTACATACACTTTAGCTGTGCCAGCTATAGTTGTGTTCCTTTCTACAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066983.13 |
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| CDS-3UTR GCA 90 bp | ATTGTAGAAAGGAACACAACTATAGCTGGCACAGCTAAAGTGTATGTAAGAAAGGACTTTTTCCGGCCGTaGAATTGCAGCATGCAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: IVERNTTIAGTAKVYVRKDFFRP*NCSMQH Trigger: ATGCTGCATGCTGCAATTGCACGGCCGGAAAAAGTC...CTTTCTTACATACACTTTAGCTGTGCCAGCTATAGTTGTGTTCCTTTCTACAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066983.13 |
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| CDS-3UTR CCA 90 bp | CAAAACCCAAAATATTCAAGCTTTATTGTAGAAAGGAACACAACTATAGCTGGCGCCATCCACCAAGACTaGATCCAACCAGTATCTGCG | + |
|
Preference number: 4 (lower is better) Translates to: QNPKYSSFIVERNTTIAGAIHQD*IQPVSA Trigger: CGCAGATACTGGTTGGATCCAGTCTTGGTGGATGGC...GCCAGCTATAGTTGTGTTCCTTTCTACAATAAAGCTTGAATATTTTGGGTTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066983.13 |
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| 3UTR CAA 72 bp | AACTACAAGAGGGAAAACCCTGAAGTATCCGGGTCTTaGATTTACTACCACACTTTCAATCTTCTGGATGCA | + |
|
Preference number: 4 (lower is better) Translates to: NYKRENPEVSGS*IYYHTFNLLDA Trigger: TGCATCCAGAAGATTGAAAGTGTGGTAGTAAATCAAAGACCCGGATACTTCAGGGTTTTCCCTCTTGTAGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066983.13 |
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| 3UTR CAA 72 bp | CTGCCACTTAAACTAAAATGGTACCTACCCATCTATTaGCACTTATGCCAGTCTAATCGTATTCCCCAAAGC | + |
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Preference number: 4 (lower is better) Translates to: LPLKLKWYLPIY*HLCQSNRIPQS Trigger: GCTTTGGGGAATACGATTAGACTGGCATAAGTGCAAATAGATGGGTAGGTACCATTTTAGTTTAAGTGGCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066983.13 |
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| CDS-3UTR CCA 90 bp | CAAAACCCAAAATATTCAAGCTTTATTGTAGAAAGGAACACAACTATAGCTGGCGATGACATCTACATCTaGGCTGACTATTCGGTCCGC | + |
|
Preference number: 4 (lower is better) Translates to: QNPKYSSFIVERNTTIAGDDIYI*ADYSVR Trigger: GCGGACCGAATAGTCAGCCCAGATGTAGATGTCATC...GCCAGCTATAGTTGTGTTCCTTTCTACAATAAAGCTTGAATATTTTGGGTTTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066983.13 |
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| CDS-3UTR TCA 90 bp | TTTTTAAACTGTCCTTTCAACCAGGTTTATTGTCTGCCGACTCTCATTTATGCGAACTGTACGGGATTCTaGAATAGCCTTCCTTGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: FLNCPFNQVYCLPTLIYANCTGF*NSLPCC Trigger: ACAACAAGGAAGGCTATTTCAGAATCCCGTACAGTT...CGCATAAATGAGAGTCGGCAGACAATAAACCTGGTTGAAAGGACAGTTTAAAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066983.13 |
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| CDS-3UTR TCA 90 bp | CAAAACCCAAAATATTCAAGCTTTATTGTAGAAAGGAACACAACTATAGCTGGCCAGGTTTGGAAGTTCTaGTCGGTTAAGGAAAGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: QNPKYSSFIVERNTTIAGQVWKF*SVKERK Trigger: CTTTCTTTCCTTAACCGATCAGAACTTCCAAACCTG...GCCAGCTATAGTTGTGTTCCTTTCTACAATAAAGCTTGAATATTTTGGGTTTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066983.13 |
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| 3UTR CAA 72 bp | AAGGAGGACAAAAATTTCCAAAGAGCAGCTAATACTTaGGTCACAATTTGTGTATTTGTGCAAAGACATCAT | + |
|
Preference number: 4 (lower is better) Translates to: KEDKNFQRAANT*VTICVFVQRHH Trigger: ATGATGTCTTTGCACAAATACACAAATTGTGACCAAAGTATTAGCTGCTCTTTGGAAATTTTTGTCCTCCTT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066983.13 |
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| CDS GCA 90 bp | CATGCCCGTGGGGGCTTCCGAGCTAGTGACGCGCTCAGGCCCGGGTaGCGGCCGAAGGACACAGCCGCCCAGCCCCACCTCCGACAAGGG | + |
|
Preference number: 5 (lower is better) Translates to: HARGGFRASDALRPG*RPKDTAAQPHLRQG Trigger: CCCTTGTCGGAGGTGGGGCTGGGCGGCTGTGTCCTTCGGCCGGCACCCGGGCCTGAGCGCGTCACTAGCTCGGAAGCCCCCACGGGCATG 73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000066983.13 ENSMUST00000128348.3 |
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| CDS-3UTR CAA 90 bp | GTCGGTGCCAAGGGGTTTACTGGACCACTCAGAGGGAGTCGCTGCTCCACATATAGGAAGTGCATGATATaGTGTCACCAATCCATCTGC | + |
|
Preference number: 5 (lower is better) Translates to: VGAKGFTGPLRGSRCSTYRKCMI*CHQSIC Trigger: GCAGATGGATTGGTGACACAATATCATGCACTTCCT...ATATGTGGAGCAGCGACTCCCTCTGAGTGGTCCAGTAAACCCCTTGGCACCGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066983.13 |
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| CDS CCA 90 bp | TGGATCCAACCAGTATCTGCGGTCCTTCAGCTACGTCATCAAGTATaGAAAGGACATCCTTTCTCCATTTCCCCACTGTGCACTCTGCTA | + |
|
Preference number: 5 (lower is better) Translates to: WIQPVSAVLQLRHQV*KGHPFSISPLCTLL Trigger: TAGCAGAGTGCACAGTGGGGAAATGGAGAAAGGATGTCCTTTCCATACTTGATGACGTAGCTGAAGGACCGCAGATACTGGTTGGATCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066983.13 |
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| CDS-3UTR CAA 90 bp | CTACCACACTTTCAATCTTCTGGATGCACTGGAGGGCATTCCAGCTACAAATGTCATCCTGTGATCACCTaGTTTCCGGAGGATGACATC | + |
|
Preference number: 5 (lower is better) Translates to: LPHFQSSGCTGGHSSYKCHPVIT*FPEDDI Trigger: GATGTCATCCTCCGGAAACAAGGTGATCACAGGATG...ACATTTGTAGCTGGAATGCCCTCCAGTGCATCCAGAAGATTGAAAGTGTGGTAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066983.13 |
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| CDS GCA 90 bp | TTGAGTCTCAACAGGAAGTGCATGATATTGTGTCACCAATCCATCTaGAGCAGTAGCTATACCAATAAGAGCTATGACTTTTTCCGGCCG | + |
|
Preference number: 5 (lower is better) Translates to: LSLNRKCMILCHQSI*SSSYTNKSYDFFRP Trigger: CGGCCGGAAAAAGTCATAGCTCTTATTGGTATAGCTACTGCTGCAGATGGATTGGTGACACAATATCATGCACTTCCTGTTGAGACTCAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066983.13 |
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| CDS GCA 72 bp | GTATGGAAAGGACATCCTTTCTCCATTTCCCCACTGTaGACTCTGCTAAGTTACCATCTGAACTTCCAATCC | + |
|
Preference number: 6 (lower is better) Translates to: VWKGHPFSISPL*TLLSYHLNFQS Trigger: GGATTGGAAGTTCAGATGGTAACTTAGCAGAGTGCACAGTGGGGAAATGGAGAAAGGATGTCCTTTCCATAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066983.13 |
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