Pregenerated sensors for ABHD1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000006638Ensembl transcript IDs: ENSMUST00000006814.9, ENSMUST00000201125.4
Found 41 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | GTCTCCACAGTGACTGGACAGTGTTGTTCCAGGAAGGCCAGAAACTaGGGCCCAGCCACCAGACGAGGCCTCTGGGGCACACATGCCCAG | + |
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Preference number: 5 (lower is better) Translates to: VSTVTGQCCSRKARN*GPATRRGLWGTHAQ Trigger: CTGGGCATGTGTGCCCCAGAGGCCTCGTCTGGTGGCTGGGCCCCAGTTTCTGGCCTTCCTGGAACAACACTGTCCAGTCACTGTGGAGAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006814.9 ENSMUST00000201125.4 |
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| CDS CCA 90 bp | CACATAGGGAGACTTCTGGGCAGCCTGCAGAGGGAAGGCATGGACTaGGGAGAAGGGGTCATCTGCTGCATTGAGGCAGAGAACAGGGGT | + |
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Preference number: 5 (lower is better) Translates to: HIGRLLGSLQREGMD*GEGVICCIEAENRG Trigger: ACCCCTGTTCTCTGCCTCAATGCAGCAGATGACCCCTTCTCCCCAGTCCATGCCTTCCCTCTGCAGGCTGCCCAGAAGTCTCCCTATGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006814.9 ENSMUST00000201125.4 |
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| CDS TCA 90 bp | GCCGTCCCTCAAAGCACCACAGTGTCGGGTAGAAAGTCTCCACAGTaGCTGGACAGTGTTGTTCCAGGAAGGCCAGAAACTGGGGCCCAG | + |
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Preference number: 5 (lower is better) Translates to: AVPQSTTVSGRKSPQ*LDSVVPGRPETGAQ Trigger: CTGGGCCCCAGTTTCTGGCCTTCCTGGAACAACACTGTCCAGTCACTGTGGAGACTTTCTACCCGACACTGTGGTGCTTTGAGGGACGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006814.9 ENSMUST00000201125.4 |
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| CDS CCA 90 bp | TCCGGTAAGGGACCACAGGCTGAGACTGCAGGAGGACTCGGAAGATaGTTTGCAGCCGTCCCTCAAAGCACCACAGTGTCGGGTAGAAAG | + |
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Preference number: 5 (lower is better) Translates to: SGKGPQAETAGGLGR*FAAVPQSTTVSGRK Trigger: CTTTCTACCCGACACTGTGGTGCTTTGAGGGACGGCTGCAAACCATCTTCCGAGTCCTCCTGCAGTCTCAGCCTGTGGTCCCTTACCGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006814.9 ENSMUST00000201125.4 |
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| CDS TCA 90 bp | TTTCGGTTCCTGGCCACAAGCCGGCAGAGTCCAGCAGTGAGTGGCTaGTTGAAGAGCAGTGAGTTGAGTGGGGTCTCCAAGGAGTCAACG | + |
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Preference number: 5 (lower is better) Translates to: FRFLATSRQSPAVSG*LKSSELSGVSKEST Trigger: CGTTGACTCCTTGGAGACCCCACTCAACTCACTGCTCTTCAATCAGCCACTCACTGCTGGACTCTGCCGGCTTGTGGCCAGGAACCGAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006814.9 ENSMUST00000201125.4 |
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| CDS GCA 90 bp | GAGTGGGGTCTCCAAGGAGTCAACGGTCTCAAAGGAATCCCAACATaGAGACAAGGTCAGTCCTGCGACCAAGCCTCCAGCCTTCCCAGT | + |
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Preference number: 5 (lower is better) Translates to: EWGLQGVNGLKGIPT*RQGQSCDQASSLPS Trigger: ACTGGGAAGGCTGGAGGCTTGGTCGCAGGACTGACCTTGTCTGCATGTTGGGATTCCTTTGAGACCGTTGACTCCTTGGAGACCCCACTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006814.9 |
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| CDS GCA 90 bp | GAGTGGGGTCTCCAAGGAGTCAACGGTCTCAAAGGAATCCCAACATaGAGACAATGGTCAGTCCTGCGACCAAGCCTCCAGCCTTCCCAG | + |
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Preference number: 5 (lower is better) Translates to: EWGLQGVNGLKGIPT*RQWSVLRPSLQPSQ Trigger: CTGGGAAGGCTGGAGGCTTGGTCGCAGGACTGACCATTGTCTGCATGTTGGGATTCCTTTGAGACCGTTGACTCCTTGGAGACCCCACTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201125.4 |
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| CDS CCA 90 bp | TCCCTCAAAGCACCACAGTGTCGGGTAGAAAGTCTCCACAGTGACTaGACAGTGTTGTTCCAGGAAGGCCAGAAACTGGGGCCCAGCCAC | + |
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Preference number: 5 (lower is better) Translates to: SLKAPQCRVESLHSD*TVLFQEGQKLGPSH Trigger: GTGGCTGGGCCCCAGTTTCTGGCCTTCCTGGAACAACACTGTCCAGTCACTGTGGAGACTTTCTACCCGACACTGTGGTGCTTTGAGGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006814.9 ENSMUST00000201125.4 |
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| CDS GCA 90 bp | GAGCAACGCCAAGAGCTAAGAGCAGAGAGATGGTGTCTGACCAGGTaGCGTTTTGCGGGCTCAGGGAGGAACTCAGCATCTTGGTTGTGT | + |
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Preference number: 5 (lower is better) Translates to: EQRQELRAERWCLTR*RFAGSGRNSASWLC Trigger: ACACAACCAAGATGCTGAGTTCCTCCCTGAGCCCGCAAAACGGCACCTGGTCAGACACCATCTCTCTGCTCTTAGCTCTTGGCGTTGCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006814.9 ENSMUST00000201125.4 |
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| CDS CCA 90 bp | AGTAGCCCAAGTAGAGAGCAACGCCAAGAGCTAAGAGCAGAGAGATaGTGTCTGACCAGGTGCCGTTTTGCGGGCTCAGGGAGGAACTCA | + |
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Preference number: 5 (lower is better) Translates to: SSPSREQRQELRAER*CLTRCRFAGSGRNS Trigger: TGAGTTCCTCCCTGAGCCCGCAAAACGGCACCTGGTCAGACACCATCTCTCTGCTCTTAGCTCTTGGCGTTGCTCTCTACTTGGGCTACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006814.9 ENSMUST00000201125.4 |
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| CDS CCA 90 bp | CTCCAAGGAGTCAACGGTCTCAAAGGAATCCCAACATGCAGACAATaGTCAGTCCTGCGACCAAGCCTCCAGCCTTCCCAGTCTGTGCCA | + |
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Preference number: 5 (lower is better) Translates to: LQGVNGLKGIPTCRQ*SVLRPSLQPSQSVP Trigger: TGGCACAGACTGGGAAGGCTGGAGGCTTGGTCGCAGGACTGACCATTGTCTGCATGTTGGGATTCCTTTGAGACCGTTGACTCCTTGGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201125.4 |
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| CDS GCA 90 bp | AGACAAGGTCAGTCCTGCGACCAAGCCTCCAGCCTTCCCAGTCTGTaGCAGATAGTTAAGCACCAGTATCCCTCCAAAAGAGATGCCCAC | + |
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Preference number: 5 (lower is better) Translates to: RQGQSCDQASSLPSL*QIVKHQYPSKRDAH Trigger: GTGGGCATCTCTTTTGGAGGGATACTGGTGCTTAACTATCTGGCACAGACTGGGAAGGCTGGAGGCTTGGTCGCAGGACTGACCTTGTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006814.9 |
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| CDS GCA 90 bp | GACAATGGTCAGTCCTGCGACCAAGCCTCCAGCCTTCCCAGTCTGTaGCAGATAGTTAAGCACCAGTATCCCTCCAAAAGAGATGCCCAC | + |
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Preference number: 5 (lower is better) Translates to: DNGQSCDQASSLPSL*QIVKHQYPSKRDAH Trigger: GTGGGCATCTCTTTTGGAGGGATACTGGTGCTTAACTATCTGGCACAGACTGGGAAGGCTGGAGGCTTGGTCGCAGGACTGACCATTGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201125.4 |
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| CDS CCA 90 bp | CCATCCTTCAGAGCTTGGTTAACTAGGTGTAAGATGTACGGCTCCTaGCTACTGCCGCTGATGCCTGGAAGCAGCAGTACTATGGGCTGG | + |
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Preference number: 5 (lower is better) Translates to: PSFRAWLTRCKMYGS*LLPLMPGSSSTMGW Trigger: CCAGCCCATAGTACTGCTGCTTCCAGGCATCAGCGGCAGTAGCCAGGAGCCGTACATCTTACACCTAGTTAACCAAGCTCTGAAGGATGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006814.9 ENSMUST00000201125.4 |
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| CDS CCA 90 bp | CGTGCGGGCCTTTATCGCAAAGTCTACATCCAACACCTTTTCAATTaGCTTTCGGTTCCTGGCCACAAGCCGGCAGAGTCCAGCAGTGAG | + |
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Preference number: 5 (lower is better) Translates to: RAGLYRKVYIQHLFN*LSVPGHKPAESSSE Trigger: CTCACTGCTGGACTCTGCCGGCTTGTGGCCAGGAACCGAAAGCCAATTGAAAAGGTGTTGGATGTAGACTTTGCGATAAAGGCCCGCACG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006814.9 ENSMUST00000201125.4 |
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| CDS GCA 90 bp | GTCAACGGTCTCAAAGGAATCCCAACATGCAGACAAGGTCAGTCCTaGGACCAAGCCTCCAGCCTTCCCAGTCTGTGCCAGATAGTTAAG | + |
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Preference number: 5 (lower is better) Translates to: VNGLKGIPTCRQGQS*DQASSLPSLCQIVK Trigger: CTTAACTATCTGGCACAGACTGGGAAGGCTGGAGGCTTGGTCGCAGGACTGACCTTGTCTGCATGTTGGGATTCCTTTGAGACCGTTGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006814.9 |
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| CDS GCA 90 bp | TCAACGGTCTCAAAGGAATCCCAACATGCAGACAATGGTCAGTCCTaGGACCAAGCCTCCAGCCTTCCCAGTCTGTGCCAGATAGTTAAG | + |
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Preference number: 5 (lower is better) Translates to: STVSKESQHADNGQS*DQASSLPSLCQIVK Trigger: CTTAACTATCTGGCACAGACTGGGAAGGCTGGAGGCTTGGTCGCAGGACTGACCATTGTCTGCATGTTGGGATTCCTTTGAGACCGTTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201125.4 |
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| CDS GCA 90 bp | AGCGACGTTTTATGTGCTTCACAACTGTTTCTAGGTCTTCAGTATTaGTGGCACAGTAAGCCCTGTGAGTCAGCAGCTCTTCCCCTCGGC | + |
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Preference number: 5 (lower is better) Translates to: SDVLCASQLFLGLQY*WHSKPCESAALPLG Trigger: GCCGAGGGGAAGAGCTGCTGACTCACAGGGCTTACTGTGCCAGCAATACTGAAGACCTAGAAACAGTTGTGAAGCACATAAAACGTCGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006814.9 ENSMUST00000201125.4 |
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| CDS CCA 90 bp | GTTAAGCACCAGTATCCCTCCAAAAGAGATGCCCACAGCCAGCAGTaGAGCTTGGGAGTAGCGACGTTTTATGTGCTTCACAACTGTTTC | + |
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Preference number: 5 (lower is better) Translates to: VKHQYPSKRDAHSQQ*SLGVATFYVLHNCF Trigger: GAAACAGTTGTGAAGCACATAAAACGTCGCTACTCCCAAGCTCCACTGCTGGCTGTGGGCATCTCTTTTGGAGGGATACTGGTGCTTAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006814.9 ENSMUST00000201125.4 |
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| CDS CCA 90 bp | ATTGAGGCAGAGAACAGGGGTGTGGATGGCATCTACCTTGGTTCTTaGGCTTGCGGCTTGGTAATAAGCCGCACAGTCTTTATACCCAAA | + |
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Preference number: 5 (lower is better) Translates to: IEAENRGVDGIYLGS*ACGLVISRTVFIPK Trigger: TTTGGGTATAAAGACTGTGCGGCTTATTACCAAGCCGCAAGCCCAAGAACCAAGGTAGATGCCATCCACACCCCTGTTCTCTGCCTCAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006814.9 ENSMUST00000201125.4 |
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| CDS CCA 72 bp | GTGCTGTTAGGCTGCTCGGCCCAGTCTAGAAGGAACTaGCCTCCATCTGGGGTCTGGAGGACTTCACTCCGG | + |
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Preference number: 6 (lower is better) Translates to: VLLGCSAQSRRN*PPSGVWRTSLR Trigger: CCGGAGTGAAGTCCTCCAGACCCCAGATGGAGGCCAGTTCCTTCTAGACTGGGCCGAGCAGCCTAACAGCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006814.9 ENSMUST00000201125.4 |
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| CDS CCA 72 bp | AGACTTCTGGGCAGCCTGCAGAGGGAAGGCATGGACTaGGGAGAAGGGGTCATCTGCTGCATTGAGGCAGAG | + |
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Preference number: 6 (lower is better) Translates to: RLLGSLQREGMD*GEGVICCIEAE Trigger: CTCTGCCTCAATGCAGCAGATGACCCCTTCTCCCCAGTCCATGCCTTCCCTCTGCAGGCTGCCCAGAAGTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006814.9 ENSMUST00000201125.4 |
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| CDS CAA 90 bp | GCACCACAGTGTCGGGTAGAAAGTCTCCACAGTGACTGGACAGTGTaGTTCCAGGAAGGCCAGAAACTGGGGCCCAGCCACCAGACGAGG | + |
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Preference number: 6 (lower is better) Translates to: APQCRVESLHSDWTV*FQEGQKLGPSHQTR Trigger: CCTCGTCTGGTGGCTGGGCCCCAGTTTCTGGCCTTCCTGGAACAACACTGTCCAGTCACTGTGGAGACTTTCTACCCGACACTGTGGTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006814.9 ENSMUST00000201125.4 |
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| CDS TCA 72 bp | CTGGCCACAAGCCGGCAGAGTCCAGCAGTGAGTGGCTaGTTGAAGAGCAGTGAGTTGAGTGGGGTCTCCAAG | + |
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Preference number: 6 (lower is better) Translates to: LATSRQSPAVSG*LKSSELSGVSK Trigger: CTTGGAGACCCCACTCAACTCACTGCTCTTCAATCAGCCACTCACTGCTGGACTCTGCCGGCTTGTGGCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006814.9 ENSMUST00000201125.4 |
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| CDS CAA 72 bp | CACAGGCTGAGACTGCAGGAGGACTCGGAAGATGGTTaGCAGCCGTCCCTCAAAGCACCACAGTGTCGGGTA | + |
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Preference number: 6 (lower is better) Translates to: HRLRLQEDSEDG*QPSLKAPQCRV Trigger: TACCCGACACTGTGGTGCTTTGAGGGACGGCTGCAAACCATCTTCCGAGTCCTCCTGCAGTCTCAGCCTGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006814.9 ENSMUST00000201125.4 |
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| CDS CAA 90 bp | GTAAGGGACCACAGGCTGAGACTGCAGGAGGACTCGGAAGATGGTTaGCAGCCGTCCCTCAAAGCACCACAGTGTCGGGTAGAAAGTCTC | + |
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Preference number: 6 (lower is better) Translates to: VRDHRLRLQEDSEDG*QPSLKAPQCRVESL Trigger: GAGACTTTCTACCCGACACTGTGGTGCTTTGAGGGACGGCTGCAAACCATCTTCCGAGTCCTCCTGCAGTCTCAGCCTGTGGTCCCTTAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006814.9 ENSMUST00000201125.4 |
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| CDS CCA 72 bp | GGGTCATCTGCTGCATTGAGGCAGAGAACAGGGGTGTaGATGGCATCTACCTTGGTTCTTGGGCTTGCGGCT | + |
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Preference number: 6 (lower is better) Translates to: GSSAALRQRTGV*MASTLVLGLAA Trigger: AGCCGCAAGCCCAAGAACCAAGGTAGATGCCATCCACACCCCTGTTCTCTGCCTCAATGCAGCAGATGACCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006814.9 ENSMUST00000201125.4 |
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| CDS CCA 72 bp | CTCCCAGGTCAGGTAGCCCCACTGAGTGCTGGAAGATaGCTCGGGCATACTGATGTAGTACGCGGTTCATGT | + |
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Preference number: 6 (lower is better) Translates to: LPGQVAPLSAGR*LGHTDVVRGSC Trigger: ACATGAACCGCGTACTACATCAGTATGCCCGAGCCATCTTCCAGCACTCAGTGGGGCTACCTGACCTGGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006814.9 ENSMUST00000201125.4 |
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| CDS GCA 72 bp | AAGAGCAGAGAGATGGTGTCTGACCAGGTGCCGTTTTaGGGGCTCAGGGAGGAACTCAGCATCTTGGTTGTG | + |
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Preference number: 6 (lower is better) Translates to: KSREMVSDQVPF*GLREELSILVV Trigger: CACAACCAAGATGCTGAGTTCCTCCCTGAGCCCGCAAAACGGCACCTGGTCAGACACCATCTCTCTGCTCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006814.9 ENSMUST00000201125.4 |
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| CDS GCA 72 bp | CAAGAGCTAAGAGCAGAGAGATGGTGTCTGACCAGGTaGCGTTTTGCGGGCTCAGGGAGGAACTCAGCATCT | + |
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Preference number: 6 (lower is better) Translates to: QELRAERWCLTR*RFAGSGRNSAS Trigger: AGATGCTGAGTTCCTCCCTGAGCCCGCAAAACGGCACCTGGTCAGACACCATCTCTCTGCTCTTAGCTCTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006814.9 ENSMUST00000201125.4 |
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| CDS GCA 72 bp | CCACAGATGTGTAGCGCTCATCCAGCTGGCGGATCGTaGGGGCCTTTATCGCAAAGTCTACATCCAACACCT | + |
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Preference number: 6 (lower is better) Translates to: PQMCSAHPAGGS*GPLSQSLHPTP Trigger: AGGTGTTGGATGTAGACTTTGCGATAAAGGCCCGCACGATCCGCCAGCTGGATGAGCGCTACACATCTGTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006814.9 ENSMUST00000201125.4 |
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| CDS CCA 72 bp | GCACCACAGTGTCGGGTAGAAAGTCTCCACAGTGACTaGACAGTGTTGTTCCAGGAAGGCCAGAAACTGGGG | + |
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Preference number: 6 (lower is better) Translates to: APQCRVESLHSD*TVLFQEGQKLG Trigger: CCCCAGTTTCTGGCCTTCCTGGAACAACACTGTCCAGTCACTGTGGAGACTTTCTACCCGACACTGTGGTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006814.9 ENSMUST00000201125.4 |
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| CDS CCA 72 bp | GTCAACGGTCTCAAAGGAATCCCAACATGCAGACAATaGTCAGTCCTGCGACCAAGCCTCCAGCCTTCCCAG | + |
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Preference number: 6 (lower is better) Translates to: VNGLKGIPTCRQ*SVLRPSLQPSQ Trigger: CTGGGAAGGCTGGAGGCTTGGTCGCAGGACTGACCATTGTCTGCATGTTGGGATTCCTTTGAGACCGTTGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201125.4 |
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| CDS GCA 72 bp | CAGTCCTGCGACCAAGCCTCCAGCCTTCCCAGTCTGTaGCAGATAGTTAAGCACCAGTATCCCTCCAAAAGA | + |
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Preference number: 6 (lower is better) Translates to: QSCDQASSLPSL*QIVKHQYPSKR Trigger: TCTTTTGGAGGGATACTGGTGCTTAACTATCTGGCACAGACTGGGAAGGCTGGAGGCTTGGTCGCAGGACTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006814.9 ENSMUST00000201125.4 |
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| CDS GCA 72 bp | CTCCAAGGAGTCAACGGTCTCAAAGGAATCCCAACATaGAGACAATGGTCAGTCCTGCGACCAAGCCTCCAG | + |
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Preference number: 6 (lower is better) Translates to: LQGVNGLKGIPT*RQWSVLRPSLQ Trigger: CTGGAGGCTTGGTCGCAGGACTGACCATTGTCTGCATGTTGGGATTCCTTTGAGACCGTTGACTCCTTGGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201125.4 |
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| CDS CCA 72 bp | AGAGCTTGGTTAACTAGGTGTAAGATGTACGGCTCCTaGCTACTGCCGCTGATGCCTGGAAGCAGCAGTACT | + |
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Preference number: 6 (lower is better) Translates to: RAWLTRCKMYGS*LLPLMPGSSST Trigger: AGTACTGCTGCTTCCAGGCATCAGCGGCAGTAGCCAGGAGCCGTACATCTTACACCTAGTTAACCAAGCTCT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006814.9 ENSMUST00000201125.4 |
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| CDS CAA 72 bp | AGAGAACAGGGGTGTGGATGGCATCTACCTTGGTTCTaGGGCTTGCGGCTTGGTAATAAGCCGCACAGTCTT | + |
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Preference number: 6 (lower is better) Translates to: REQGCGWHLPWF*GLRLGNKPHSL Trigger: AAGACTGTGCGGCTTATTACCAAGCCGCAAGCCCAAGAACCAAGGTAGATGCCATCCACACCCCTGTTCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006814.9 ENSMUST00000201125.4 |
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| CDS CAA 90 bp | GGCAGAGAACAGGGGTGTGGATGGCATCTACCTTGGTTCTTGGGCTaGCGGCTTGGTAATAAGCCGCACAGTCTTTATACCCAAAAGCCA | + |
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Preference number: 6 (lower is better) Translates to: GREQGCGWHLPWFLG*RLGNKPHSLYTQKP Trigger: TGGCTTTTGGGTATAAAGACTGTGCGGCTTATTACCAAGCCGCAAGCCCAAGAACCAAGGTAGATGCCATCCACACCCCTGTTCTCTGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006814.9 ENSMUST00000201125.4 |
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| CDS TCA 72 bp | CAAAGCACCACAGTGTCGGGTAGAAAGTCTCCACAGTaGCTGGACAGTGTTGTTCCAGGAAGGCCAGAAACT | + |
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Preference number: 6 (lower is better) Translates to: QSTTVSGRKSPQ*LDSVVPGRPET Trigger: AGTTTCTGGCCTTCCTGGAACAACACTGTCCAGTCACTGTGGAGACTTTCTACCCGACACTGTGGTGCTTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006814.9 ENSMUST00000201125.4 |
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| CDS CCA 72 bp | CTTTATCGCAAAGTCTACATCCAACACCTTTTCAATTaGCTTTCGGTTCCTGGCCACAAGCCGGCAGAGTCC | + |
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Preference number: 6 (lower is better) Translates to: LYRKVYIQHLFN*LSVPGHKPAES Trigger: GGACTCTGCCGGCTTGTGGCCAGGAACCGAAAGCCAATTGAAAAGGTGTTGGATGTAGACTTTGCGATAAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006814.9 ENSMUST00000201125.4 |
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| CDS CAA 72 bp | CCTTTATCGCAAAGTCTACATCCAACACCTTTTCAATaGGCTTTCGGTTCCTGGCCACAAGCCGGCAGAGTC | + |
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Preference number: 6 (lower is better) Translates to: PLSQSLHPTPFQ*AFGSWPQAGRV Trigger: GACTCTGCCGGCTTGTGGCCAGGAACCGAAAGCCAATTGAAAAGGTGTTGGATGTAGACTTTGCGATAAAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006814.9 ENSMUST00000201125.4 |
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