Pregenerated sensors for ABCG5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000040505Ensembl transcript IDs: ENSMUST00000066175.10, ENSMUST00000163375.2
Found 109 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TTGGGGCTCCGGATAGACACAAGGGTCAGACACAAGGGTCGCAGATaGAATCCTGATGGTTGTAGACAGTACTTCTCTGTGCTCCACAGT | + |
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Preference number: 1 (lower is better) Translates to: LGLRIDTRVRHKGRR*NPDGCRQYFSVLHS Trigger: ACTGTGGAGCACAGAGAAGTACTGTCTACAACCATCAGGATTCCATCTGCGACCCTTGTGTCTGACCCTTGTGTCTATCCGGAGCCCCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066175.10 |
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| 3UTR CAA 90 bp | GCCCCACAAGCTGGAATAGCAGAGGGCTGTGAGTTCTCGTTGCCCTaGGGGCTCCGGATAGACACAAGGGTCAGACACAAGGGTCGCAGA | + |
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Preference number: 2 (lower is better) Translates to: APQAGIAEGCEFSLP*GLRIDTRVRHKGRR Trigger: TCTGCGACCCTTGTGTCTGACCCTTGTGTCTATCCGGAGCCCCAAGGGCAACGAGAACTCACAGCCCTCTGCTATTCCAGCTTGTGGGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066175.10 |
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| 3UTR CAA 90 bp | CACATTGCCCCACAAGCTGGAATAGCAGAGGGCTGTGAGTTCTCGTaGCCCTTGGGGCTCCGGATAGACACAAGGGTCAGACACAAGGGT | + |
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Preference number: 2 (lower is better) Translates to: HIAPQAGIAEGCEFS*PLGLRIDTRVRHKG Trigger: ACCCTTGTGTCTGACCCTTGTGTCTATCCGGAGCCCCAAGGGCAACGAGAACTCACAGCCCTCTGCTATTCCAGCTTGTGGGGCAATGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066175.10 |
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| 3UTR-3UTR GCA 90 bp | CTCCGGATAGACACAAGGGTCAGACACAAGGGTCGCAGATGGAATCCTGATGGTGCTCCACAGTGGGCGTaGCTGCCCATTAACCCTTTC | + |
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Preference number: 2 (lower is better) Translates to: LRIDTRVRHKGRRWNPDGAPQWA*LPINPF Trigger: GAAAGGGTTAATGGGCAGGCACGCCCACTGTGGAGC...ACCATCAGGATTCCATCTGCGACCCTTGTGTCTGACCCTTGTGTCTATCCGGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066175.10 |
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| 3UTR-3UTR GCA 90 bp | TTTACATTATTGGACCAGTTCAGTCACAATGTCCAAGCACCACATTGCCCCACAGACAGTACTTCTCTGTaGTCCACAGTGGGCGTGCCT | + |
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Preference number: 2 (lower is better) Translates to: FTLLDQFSHNVQAPHCPTDSTSL*STVGVP Trigger: AGGCACGCCCACTGTGGAGCACAGAGAAGTACTGTC...TGTGGGGCAATGTGGTGCTTGGACATTGTGACTGAACTGGTCCAATAATGTAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066175.10 |
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| 3UTR CCA 72 bp | CGGATAGACACAAGGGTCAGACACAAGGGTCGCAGATaGAATCCTGATGGTTGTAGACAGTACTTCTCTGTG | + |
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Preference number: 3 (lower is better) Translates to: RIDTRVRHKGRR*NPDGCRQYFSV Trigger: CACAGAGAAGTACTGTCTACAACCATCAGGATTCCATCTGCGACCCTTGTGTCTGACCCTTGTGTCTATCCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066175.10 |
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| CDS-3UTR CCA 90 bp | CTCGTTGCCCTTGGGGCTCCGGATAGACACAAGGGTCAGACACAAGGGTCGCAGGGAGTTGGGCTGCGATaGAAACTCGGCGCCGCTCGC | + |
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Preference number: 4 (lower is better) Translates to: LVALGAPDRHKGQTQGSQGVGLR*KLGAAR Trigger: GCGAGCGGCGCCGAGTTTCCATCGCAGCCCAACTCC...CTGCGACCCTTGTGTCTGACCCTTGTGTCTATCCGGAGCCCCAAGGGCAACGAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066175.10 |
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| CDS-3UTR CCA 90 bp | CTTCTCTGTGCTCCACAGTGGGCGTGCCTGCCCATTAACCCTTTCCTGCCTGTCGCAGCCTCCCGGAGATaGCGTCCAGCAGCGTGGTCT | + |
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Preference number: 4 (lower is better) Translates to: LLCAPQWACLPINPFLPVAASRR*RPAAWS Trigger: AGACCACGCTGCTGGACGCCATCTCCGGGAGGCTGC...GACAGGCAGGAAAGGGTTAATGGGCAGGCACGCCCACTGTGGAGCACAGAGAAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066175.10 |
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| CDS-3UTR TCA 90 bp | TCGTTGCCCTTGGGGCTCCGGATAGACACAAGGGTCAGACACAAGGGTCGCAGAGACCCTCTGTTGATGTaGGGCCCTCTGGCTCCCTCT | + |
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Preference number: 4 (lower is better) Translates to: SLPLGLRIDTRVRHKGRRDPLLM*GPLAPS Trigger: AGAGGGAGCCAGAGGGCCTCACATCAACAGAGGGTC...TCTGCGACCCTTGTGTCTGACCCTTGTGTCTATCCGGAGCCCCAAGGGCAACGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066175.10 |
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| CDS-3UTR TCA 90 bp | TCGTTGCCCTTGGGGCTCCGGATAGACACAAGGGTCAGACACAAGGGTCGCAGAGACTCTCCTGGTCGCTaGCGGCTCTCAGCATGGGAA | + |
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Preference number: 4 (lower is better) Translates to: SLPLGLRIDTRVRHKGRRDSPGR*RLSAWE Trigger: TTCCCATGCTGAGAGCCGTCAGCGACCAGGAGAGTC...TCTGCGACCCTTGTGTCTGACCCTTGTGTCTATCCGGAGCCCCAAGGGCAACGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066175.10 |
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| CDS-3UTR TCA 90 bp | CTCGTTGCCCTTGGGGCTCCGGATAGACACAAGGGTCAGACACAAGGGTCGCAGGAGGCTGGTGGATGGTaGCAATCACAATTCGGTCCC | + |
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Preference number: 4 (lower is better) Translates to: LVALGAPDRHKGQTQGSQEAGGW*QSQFGP Trigger: GGGACCGAATTGTGATTGTCACCATCCACCAGCCTC...CTGCGACCCTTGTGTCTGACCCTTGTGTCTATCCGGAGCCCCAAGGGCAACGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066175.10 |
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| CDS-3UTR GCA 90 bp | TCGTTGCCCTTGGGGCTCCGGATAGACACAAGGGTCAGACACAAGGGTCGCAGACTTGGAACTGGTCCCTaGGCAGCTCGCAGCCATTCA | + |
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Preference number: 4 (lower is better) Translates to: SLPLGLRIDTRVRHKGRRLGTGP*AARSHS Trigger: TGAATGGCTGCGAGCTGCGCAGGGACCAGTTCCAAG...TCTGCGACCCTTGTGTCTGACCCTTGTGTCTATCCGGAGCCCCAAGGGCAACGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066175.10 |
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| CDS-3UTR CCA 90 bp | GGCTGTGAGTTCTCGTTGCCCTTGGGGCTCCGGATAGACACAAGGGTCAGACACAAGCAGTCTTGGAACTaGTCCCTGCGCAGCTCGCAG | + |
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Preference number: 4 (lower is better) Translates to: GCEFSLPLGLRIDTRVRHKQSWN*SLRSSQ Trigger: CTGCGAGCTGCGCAGGGACCAGTTCCAAGACTGCTT...GTGTCTGACCCTTGTGTCTATCCGGAGCCCCAAGGGCAACGAGAACTCACAGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066175.10 |
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| CDS-3UTR CCA 90 bp | GGCTGTGAGTTCTCGTTGCCCTTGGGGCTCCGGATAGACACAAGGGTCAGACACGCCAAGCATCTCCTCTaGGGTGCCACAGAACACCAA | + |
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Preference number: 4 (lower is better) Translates to: GCEFSLPLGLRIDTRVRHAKHLL*GATEHQ Trigger: TTGGTGTTCTGTGGCACCCCAGAGGAGATGCTTGGC...GTGTCTGACCCTTGTGTCTATCCGGAGCCCCAAGGGCAACGAGAACTCACAGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066175.10 |
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| CDS-3UTR TCA 90 bp | GTTCTCGTTGCCCTTGGGGCTCCGGATAGACACAAGGGTCAGACACAAGGGTCGTCTGCTGGCATGATTTaGTGTTCCACCAAGGCCCGA | + |
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Preference number: 4 (lower is better) Translates to: VLVALGAPDRHKGQTQGSSAGMI*CSTKAR Trigger: TCGGGCCTTGGTGGAACATCAAATCATGCCAGCAGA...CGACCCTTGTGTCTGACCCTTGTGTCTATCCGGAGCCCCAAGGGCAACGAGAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066175.10 |
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| CDS-3UTR TCA 90 bp | CTTCTCTGTGCTCCACAGTGGGCGTGCCTGCCCATTAACCCTTTCCTGCCTGTCGGCTCAGCTCTGTCATaGCTGCCTCTACCTTCTTGT | + |
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Preference number: 4 (lower is better) Translates to: LLCAPQWACLPINPFLPVGSALS*LPLPSC Trigger: ACAAGAAGGTAGAGGCAGTCATGACAGAGCTGAGCC...GACAGGCAGGAAAGGGTTAATGGGCAGGCACGCCCACTGTGGAGCACAGAGAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066175.10 |
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| CDS-3UTR TCA 90 bp | TCGTTGCCCTTGGGGCTCCGGATAGACACAAGGGTCAGACACAAGGGTCGCAGAACAGATTCACAGCATTaGGCATGCCGGTGTATGGGG | + |
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Preference number: 4 (lower is better) Translates to: SLPLGLRIDTRVRHKGRRTDSQH*ACRCMG Trigger: CCCCATACACCGGCATGCTCAATGCTGTGAATCTGT...TCTGCGACCCTTGTGTCTGACCCTTGTGTCTATCCGGAGCCCCAAGGGCAACGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066175.10 |
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| CDS-3UTR GCA 90 bp | TCTGTGCTCCACAGTGGGCGTGCCTGCCCATTAACCCTTTCCTGCCTGTCATCTTCACAATTCGGTCCCTaGGAGCCAGCTCAGCCAAGA | + |
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Preference number: 4 (lower is better) Translates to: SVLHSGRACPLTLSCLSSSQFGP*EPAQPR Trigger: TCTTGGCTGAGCTGGCTCGCAGGGACCGAATTGTGA...AGATGACAGGCAGGAAAGGGTTAATGGGCAGGCACGCCCACTGTGGAGCACAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066175.10 |
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| CDS-3UTR CCA 90 bp | GTTCTCGTTGCCCTTGGGGCTCCGGATAGACACAAGGGTCAGACACAAGGGTCGGGCGCCGCTCGCCACTaGAAATTCCCCCAAAATTAT | + |
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Preference number: 4 (lower is better) Translates to: VLVALGAPDRHKGQTQGSGAARH*KFPQNY Trigger: ATAATTTTGGGGGAATTTCCAGTGGCGAGCGGCGCC...CGACCCTTGTGTCTGACCCTTGTGTCTATCCGGAGCCCCAAGGGCAACGAGAAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000066175.10 |
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| CDS-3UTR CCA 90 bp | GAGGGCTGTGAGTTCTCGTTGCCCTTGGGGCTCCGGATAGACACAAGGGTCAGAAGCTCAGAGCGAGGCTaGTGGATGGTGACAATCACA | + |
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Preference number: 4 (lower is better) Translates to: EGCEFSLPLGLRIDTRVRSSERG*WMVTIT Trigger: TGTGATTGTCACCATCCACCAGCCTCGCTCTGAGCT...TCTGACCCTTGTGTCTATCCGGAGCCCCAAGGGCAACGAGAACTCACAGCCCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066175.10 |
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| 3UTR CAA 72 bp | GCTGGAATAGCAGAGGGCTGTGAGTTCTCGTTGCCCTaGGGGCTCCGGATAGACACAAGGGTCAGACACAAG | + |
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Preference number: 4 (lower is better) Translates to: AGIAEGCEFSLP*GLRIDTRVRHK Trigger: CTTGTGTCTGACCCTTGTGTCTATCCGGAGCCCCAAGGGCAACGAGAACTCACAGCCCTCTGCTATTCCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066175.10 |
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| 3UTR CAA 72 bp | CCACAAGCTGGAATAGCAGAGGGCTGTGAGTTCTCGTaGCCCTTGGGGCTCCGGATAGACACAAGGGTCAGA | + |
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Preference number: 4 (lower is better) Translates to: PQAGIAEGCEFS*PLGLRIDTRVR Trigger: TCTGACCCTTGTGTCTATCCGGAGCCCCAAGGGCAACGAGAACTCACAGCCCTCTGCTATTCCAGCTTGTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066175.10 |
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| CDS-3UTR CCA 90 bp | CTTCTCTGTGCTCCACAGTGGGCGTGCCTGCCCATTAACCCTTTCCTGCCTGTCTGCAGTCCAGTCCTGTaGTTGGCTCATCTAGCATCA | + |
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Preference number: 4 (lower is better) Translates to: LLCAPQWACLPINPFLPVCSPVL*LAHLAS Trigger: TGATGCTAGATGAGCCAACCACAGGACTGGACTGCA...GACAGGCAGGAAAGGGTTAATGGGCAGGCACGCCCACTGTGGAGCACAGAGAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066175.10 |
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| CDS-3UTR TCA 90 bp | CTCCGGATAGACACAAGGGTCAGACACAAGGGTCGCAGATGGAATCCTGATGGTACGTCTCGCGCACAGTaGGGCTGCTCAGAAAAACGT | + |
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Preference number: 4 (lower is better) Translates to: LRIDTRVRHKGRRWNPDGTSRAQ*GCSEKR Trigger: ACGTTTTTCTGAGCAGCCTCACTGTGCGCGAGACGT...ACCATCAGGATTCCATCTGCGACCCTTGTGTCTGACCCTTGTGTCTATCCGGAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066175.10 |
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| CDS-3UTR TCA 90 bp | CTCGTTGCCCTTGGGGCTCCGGATAGACACAAGGGTCAGACACAAGGGTCGCAGAGATGTCAGATTCCTTaGAGGCACATTCCAGCATCT | + |
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Preference number: 4 (lower is better) Translates to: LVALGAPDRHKGQTQGSQRCQIP*RHIPAS Trigger: AGATGCTGGAATGTGCCTTCAAGGAATCTGACATCT...CTGCGACCCTTGTGTCTGACCCTTGTGTCTATCCGGAGCCCCAAGGGCAACGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066175.10 |
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| CDS-3UTR CCA 90 bp | TCGTTGCCCTTGGGGCTCCGGATAGACACAAGGGTCAGACACAAGGGTCGCAGAATTTTGTCGAAGTGTTaGAAGAGCTCAGAGCGAGGC | + |
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Preference number: 4 (lower is better) Translates to: SLPLGLRIDTRVRHKGRRILSKC*KSSERG Trigger: GCCTCGCTCTGAGCTCTTCCAACACTTCGACAAAAT...TCTGCGACCCTTGTGTCTGACCCTTGTGTCTATCCGGAGCCCCAAGGGCAACGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066175.10 |
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| CDS-3UTR GCA 90 bp | GGCTGTGAGTTCTCGTTGCCCTTGGGGCTCCGGATAGACACAAGGGTCAGACACCAGCTCTGTCATGACTaGCTCTACCTTCTTGTTGTA | + |
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Preference number: 4 (lower is better) Translates to: GCEFSLPLGLRIDTRVRHQLCHD*LYLLVV Trigger: TACAACAAGAAGGTAGAGGCAGTCATGACAGAGCTG...GTGTCTGACCCTTGTGTCTATCCGGAGCCCCAAGGGCAACGAGAACTCACAGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066175.10 |
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| CDS-3UTR GCA 90 bp | GGCTGTGAGTTCTCGTTGCCCTTGGGGCTCCGGATAGACACAAGGGTCAGACACTTTGATTTGCAGTCATaGAGTCCAGTCCTGTGGTTG | + |
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Preference number: 4 (lower is better) Translates to: GCEFSLPLGLRIDTRVRHFDLQS*SPVLWL Trigger: CAACCACAGGACTGGACTGCATGACTGCAAATCAAA...GTGTCTGACCCTTGTGTCTATCCGGAGCCCCAAGGGCAACGAGAACTCACAGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066175.10 |
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| CDS-3UTR GCA 90 bp | TTCAGTCACAATGTCCAAGCACCACATTGCCCCACAAGCTGGAATAGCAGAGGGGCATCTCCTCTGGGGTaGCACAGAACACCAACTCTC | + |
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Preference number: 4 (lower is better) Translates to: FSHNVQAPHCPTSWNSRGASPLG*HRTPTL Trigger: GAGAGTTGGTGTTCTGTGGCACCCCAGAGGAGATGC...CCCTCTGCTATTCCAGCTTGTGGGGCAATGTGGTGCTTGGACATTGTGACTGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000066175.10 |
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| CDS-3UTR TCA 90 bp | CTCCGGATAGACACAAGGGTCAGACACAAGGGTCGCAGATGGAATCCTGATGGTCCACTTCTGCTGGCATaGTTTGATGTTCCACCAAGG | + |
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Preference number: 4 (lower is better) Translates to: LRIDTRVRHKGRRWNPDGPLLLA*FDVPPR Trigger: CCTTGGTGGAACATCAAATCATGCCAGCAGAAGTGG...ACCATCAGGATTCCATCTGCGACCCTTGTGTCTGACCCTTGTGTCTATCCGGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066175.10 |
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| CDS-3UTR TCA 90 bp | TCTGTGCTCCACAGTGGGCGTGCCTGCCCATTAACCCTTTCCTGCCTGTCATCTGAGGATCTTTTGTTTTaGAAGGAACCGTGGGTAAGG | + |
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Preference number: 4 (lower is better) Translates to: SVLHSGRACPLTLSCLSSEDLLF*KEPWVR Trigger: CCTTACCCACGGTTCCTTTCAAAACAAAAGATCCTC...AGATGACAGGCAGGAAAGGGTTAATGGGCAGGCACGCCCACTGTGGAGCACAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066175.10 |
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| CDS-3UTR TCA 90 bp | TCTGTGCTCCACAGTGGGCGTGCCTGCCCATTAACCCTTTCCTGCCTGTCATCTCCCATGATCAGATTCTaGACGAGACGCATAATCACT | + |
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Preference number: 4 (lower is better) Translates to: SVLHSGRACPLTLSCLSSPMIRF*TRRIIT Trigger: AGTGATTATGCGTCTCGTTCAGAATCTGATCATGGG...AGATGACAGGCAGGAAAGGGTTAATGGGCAGGCACGCCCACTGTGGAGCACAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066175.10 |
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| CDS-3UTR GCA 90 bp | GAGGGCTGTGAGTTCTCGTTGCCCTTGGGGCTCCGGATAGACACAAGGGTCAGAAAGGACAATTTGATTTaGAGTCATGCAGTCCAGTCC | + |
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Preference number: 4 (lower is better) Translates to: EGCEFSLPLGLRIDTRVRKDNLI*SHAVQS Trigger: GGACTGGACTGCATGACTGCAAATCAAATTGTCCTT...TCTGACCCTTGTGTCTATCCGGAGCCCCAAGGGCAACGAGAACTCACAGCCCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066175.10 |
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| CDS-3UTR GCA 90 bp | CTCGTTGCCCTTGGGGCTCCGGATAGACACAAGGGTCAGACACAAGGGTCGCAGCGCATAATCACTGCCTaGTTATTCCTCATTAAGTTT | + |
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Preference number: 4 (lower is better) Translates to: LVALGAPDRHKGQTQGSQRIITA*LFLIKF Trigger: AAACTTAATGAGGAATAAGCAGGCAGTGATTATGCG...CTGCGACCCTTGTGTCTGACCCTTGTGTCTATCCGGAGCCCCAAGGGCAACGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066175.10 |
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| CDS-3UTR CCA 90 bp | TATTTACATTATTGGACCAGTTCAGTCACAATGTCCAAGCACCACATTGCCCCATGGCGTCCAGCAGCGTaGTCTTCCCTGAGCCTGAGC | + |
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Preference number: 4 (lower is better) Translates to: YLHYWTSSVTMSKHHIAPWRPAA*SSLSLS Trigger: GCTCAGGCTCAGGGAAGACCACGCTGCTGGACGCCA...TGGGGCAATGTGGTGCTTGGACATTGTGACTGAACTGGTCCAATAATGTAAATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066175.10 |
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| CDS-3UTR CCA 90 bp | CTCCGGATAGACACAAGGGTCAGACACAAGGGTCGCAGATGGAATCCTGATGGTAAAAATCAAAGGGATTaGAATGTTCAGGACAGGGGT | + |
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Preference number: 4 (lower is better) Translates to: LRIDTRVRHKGRRWNPDGKNQRD*NVQDRG Trigger: ACCCCTGTCCTGAACATTCCAATCCCTTTGATTTTT...ACCATCAGGATTCCATCTGCGACCCTTGTGTCTGACCCTTGTGTCTATCCGGAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066175.10 |
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| CDS-3UTR TCA 90 bp | TATTTACATTATTGGACCAGTTCAGTCACAATGTCCAAGCACCACATTGCCCCATGGATCCACCACAAGTaGAGTTCAGGCCGTAAAACT | + |
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Preference number: 4 (lower is better) Translates to: YLHYWTSSVTMSKHHIAPWIHHK*SSGRKT Trigger: AGTTTTACGGCCTGAACTTCACTTGTGGTGGATCCA...TGGGGCAATGTGGTGCTTGGACATTGTGACTGAACTGGTCCAATAATGTAAATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066175.10 |
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| CDS-3UTR TCA 90 bp | TATTTACATTATTGGACCAGTTCAGTCACAATGTCCAAGCACCACATTGCCCCAAAGAGAAGGACAATTTaGTTTGCAGTCATGCAGTCC | + |
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Preference number: 4 (lower is better) Translates to: YLHYWTSSVTMSKHHIAPKRRTI*FAVMQS Trigger: GGACTGCATGACTGCAAATCAAATTGTCCTTCTCTT...TGGGGCAATGTGGTGCTTGGACATTGTGACTGAACTGGTCCAATAATGTAAATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066175.10 |
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| CDS-3UTR GCA 90 bp | TATTATTTACATTATTGGACCAGTTCAGTCACAATGTCCAAGCACCACATTGCCACATCTTTGAGGATTTaGCTGTCCCACTTCTGCTGG | + |
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Preference number: 4 (lower is better) Translates to: YYLHYWTSSVTMSKHHIATSLRI*LSHFCW Trigger: CCAGCAGAAGTGGGACAGGCAAATCCTCAAAGATGT...GGCAATGTGGTGCTTGGACATTGTGACTGAACTGGTCCAATAATGTAAATAATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066175.10 |
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| CDS-3UTR CCA 90 bp | TATTTACATTATTGGACCAGTTCAGTCACAATGTCCAAGCACCACATTGCCCCACTCCGTAAGTCAGGATaGCAATTTTGTCGAAGTGTT | + |
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Preference number: 4 (lower is better) Translates to: YLHYWTSSVTMSKHHIAPLRKSG*QFCRSV Trigger: AACACTTCGACAAAATTGCCATCCTGACTTACGGAG...TGGGGCAATGTGGTGCTTGGACATTGTGACTGAACTGGTCCAATAATGTAAATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066175.10 |
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| CDS-3UTR TCA 90 bp | TATTATTTACATTATTGGACCAGTTCAGTCACAATGTCCAAGCACCACATTGCCGGTAACCACAGTTATTaGAGAAGCCAAGCATCTCCT | + |
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Preference number: 4 (lower is better) Translates to: YYLHYWTSSVTMSKHHIAGNHSY*RSQASP Trigger: AGGAGATGCTTGGCTTCTTCAATAACTGTGGTTACC...GGCAATGTGGTGCTTGGACATTGTGACTGAACTGGTCCAATAATGTAAATAATA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066175.10 |
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| CDS-3UTR GCA 90 bp | TATTATTTACATTATTGGACCAGTTCAGTCACAATGTCCAAGCACCACATTGCCCCCCAAAATTATAGCTaGCAATCATTTGGTCCGCCA | + |
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Preference number: 4 (lower is better) Translates to: YYLHYWTSSVTMSKHHIAPQNYS*QSFGPP Trigger: TGGCGGACCAAATGATTGGCAGCTATAATTTTGGGG...GGCAATGTGGTGCTTGGACATTGTGACTGAACTGGTCCAATAATGTAAATAATA 41% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000066175.10 |
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| CDS GCA 90 bp | GCAGCTCGCAGCCATTCACAAACACCTCCCCTTCCAGGGTCCCAGTaGGCCGCAGCCTCCCGGAGATGGCGTCCAGCAGCGTGGTCTTCC | + |
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Preference number: 5 (lower is better) Translates to: AARSHSQTPPLPGSQ*AAASRRWRPAAWSS Trigger: GGAAGACCACGCTGCTGGACGCCATCTCCGGGAGGCTGCGGCGCACTGGGACCCTGGAAGGGGAGGTGTTTGTGAATGGCTGCGAGCTGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066175.10 ENSMUST00000163375.2 |
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| CDS CCA 90 bp | ACACCTCCCCTTCCAGGGTCCCAGTGCGCCGCAGCCTCCCGGAGATaGCGTCCAGCAGCGTGGTCTTCCCTGAGCCTGAGCTGCCTAAGA | + |
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Preference number: 5 (lower is better) Translates to: TPPLPGSQCAAASRR*RPAAWSSLSLSCLR Trigger: TCTTAGGCAGCTCAGGCTCAGGGAAGACCACGCTGCTGGACGCCATCTCCGGGAGGCTGCGGCGCACTGGGACCCTGGAAGGGGAGGTGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066175.10 ENSMUST00000163375.2 |
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| CDS TCA 90 bp | CGCTCTCTGCTTTGGGTGTCCACTGATGTCAAGTCCATGGGGTCCTaGAGGAGTTGGGCTGCGATGGAAACTCGGCGCCGCTCGCCACTG | + |
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Preference number: 5 (lower is better) Translates to: RSLLWVSTDVKSMGS*RSWAAMETRRRSPL Trigger: CAGTGGCGAGCGGCGCCGAGTTTCCATCGCAGCCCAACTCCTTCAGGACCCCATGGACTTGACATCAGTGGACACCCAAAGCAGAGAGCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163375.2 |
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| CDS GCA 90 bp | CGTCGCTCTGCAGGACGTAGGAGAAGCAGTCTTGGAACTGGTCCCTaGGCAGCTCGCAGCCATTCACAAACACCTCCCCTTCCAGGGTCC | + |
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Preference number: 5 (lower is better) Translates to: RRSAGRRRSSLGTGP*AARSHSQTPPLPGS Trigger: GGACCCTGGAAGGGGAGGTGTTTGTGAATGGCTGCGAGCTGCGCAGGGACCAGTTCCAAGACTGCTTCTCCTACGTCCTGCAGAGCGACG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066175.10 ENSMUST00000163375.2 |
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| CDS-3UTR CAA 90 bp | CTTCTCTGTGCTCCACAGTGGGCGTGCCTGCCCATTAACCCTTTCCTGCCTGTCGCCCGTGACCGAACCTaGCTCCAGGGAGCTCAGAGA | + |
|
Preference number: 5 (lower is better) Translates to: LLCAPQWACLPINPFLPVARDRT*LQGAQR Trigger: TCTCTGAGCTCCCTGGAGCAAGGTTCGGTCACGGGC...GACAGGCAGGAAAGGGTTAATGGGCAGGCACGCCCACTGTGGAGCACAGAGAAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066175.10 |
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| CDS TCA 90 bp | GGCAGAGGGCCAGCATCGCTGTGTATCGCAACGTCTCGCGCACAGTaGGGCTGCTCAGAAAAACGTCGCTCTGCAGGACGTAGGAGAAGC | + |
|
Preference number: 5 (lower is better) Translates to: GRGPASLCIATSRAQ*GCSEKRRSAGRRRS Trigger: GCTTCTCCTACGTCCTGCAGAGCGACGTTTTTCTGAGCAGCCTCACTGTGCGCGAGACGTTGCGATACACAGCGATGCTGGCCCTCTGCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000066175.10 ENSMUST00000163375.2 |
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| CDS-3UTR CAA 90 bp | CTCGTTGCCCTTGGGGCTCCGGATAGACACAAGGGTCAGACACAAGGGTCGCAGGTAGGAGAAGCAGTCTaGGAACTGGTCCCTGCGCAG | + |
|
Preference number: 5 (lower is better) Translates to: LVALGAPDRHKGQTQGSQVGEAV*ELVPAQ Trigger: CTGCGCAGGGACCAGTTCCAAGACTGCTTCTCCTAC...CTGCGACCCTTGTGTCTGACCCTTGTGTCTATCCGGAGCCCCAAGGGCAACGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066175.10 |
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| CDS TCA 90 bp | TGCCAATCATTTGGTCCGCCACGTGGCTCAGGCTCAGCTCTGTCATaGCTGCCTCTACCTTCTTGTTGTAGAAGTCCGCGGAGCTGCGGC | + |
|
Preference number: 5 (lower is better) Translates to: CQSFGPPRGSGSALS*LPLPSCCRSPRSCG Trigger: GCCGCAGCTCCGCGGACTTCTACAACAAGAAGGTAGAGGCAGTCATGACAGAGCTGAGCCTGAGCCACGTGGCGGACCAAATGATTGGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066175.10 ENSMUST00000163375.2 |
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| CDS CCA 90 bp | TCTCAGCATGGGAAACAGATTCACAGCATTGAGCATGCCGGTGTATaGGGTGGCACCCACAAGCTGATAGAGCAGCCCCACGCGGTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: SQHGKQIHSIEHAGV*GGTHKLIEQPHAVL Trigger: CAGGACCGCGTGGGGCTGCTCTATCAGCTTGTGGGTGCCACCCCATACACCGGCATGCTCAATGCTGTGAATCTGTTTCCCATGCTGAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066175.10 ENSMUST00000163375.2 |
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| CDS CCA 90 bp | CTATTTCCCGCTCTCTGCTTTGGGTGTCCACTGATGTCAAGTCCATaGGGTCCTGAAGGAGTTGGGCTGCGATGGAAACTCGGCGCCGCT | + |
|
Preference number: 5 (lower is better) Translates to: LFPALCFGCPLMSSP*GPEGVGLRWKLGAA Trigger: AGCGGCGCCGAGTTTCCATCGCAGCCCAACTCCTTCAGGACCCCATGGACTTGACATCAGTGGACACCCAAAGCAGAGAGCGGGAAATAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163375.2 |
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| CDS GCA 90 bp | AATCATTTGGTCCGCCACGTGGCTCAGGCTCAGCTCTGTCATGACTaGCTCTACCTTCTTGTTGTAGAAGTCCGCGGAGCTGCGGCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: NHLVRHVAQAQLCHD*LYLLVVEVRGAAAE Trigger: CTCTGCCGCAGCTCCGCGGACTTCTACAACAAGAAGGTAGAGGCAGTCATGACAGAGCTGAGCCTGAGCCACGTGGCGGACCAAATGATT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066175.10 ENSMUST00000163375.2 |
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| CDS-3UTR CAA 90 bp | TCTGTGCTCCACAGTGGGCGTGCCTGCCCATTAACCCTTTCCTGCCTGTCATCTTTCTGCTGGCATGATTaGATGTTCCACCAAGGCCCG | + |
|
Preference number: 5 (lower is better) Translates to: SVLHSGRACPLTLSCLSSFCWHD*MFHQGP Trigger: CGGGCCTTGGTGGAACATCAAATCATGCCAGCAGAA...AGATGACAGGCAGGAAAGGGTTAATGGGCAGGCACGCCCACTGTGGAGCACAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066175.10 |
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| CDS CCA 90 bp | ATGGCAATTTTGTCGAAGTGTTGGAAGAGCTCAGAGCGAGGCTGGTaGATGGTGACAATCACAATTCGGTCCCTGCGAGCCAGCTCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: MAILSKCWKSSERGW*MVTITIRSLRASSA Trigger: GGCTGAGCTGGCTCGCAGGGACCGAATTGTGATTGTCACCATCCACCAGCCTCGCTCTGAGCTCTTCCAACACTTCGACAAAATTGCCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066175.10 |
||
| CDS-3UTR CAA 90 bp | GGCTGTGAGTTCTCGTTGCCCTTGGGGCTCCGGATAGACACAAGGGTCAGACACAATTTTGTCGAAGTGTaGGAAGAGCTCAGAGCGAGG | + |
|
Preference number: 5 (lower is better) Translates to: GCEFSLPLGLRIDTRVRHNFVEV*EELRAR Trigger: CCTCGCTCTGAGCTCTTCCAACACTTCGACAAAATT...GTGTCTGACCCTTGTGTCTATCCGGAGCCCCAAGGGCAACGAGAACTCACAGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066175.10 |
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| CDS TCA 90 bp | TCGCTTGTACGTTTCTATTTCCCGCTCTCTGCTTTGGGTGTCCACTaGTGTCAAGTCCATGGGGTCCTGAAGGAGTTGGGCTGCGATGGA | + |
|
Preference number: 5 (lower is better) Translates to: SLVRFYFPLSALGVH*CQVHGVLKELGCDG Trigger: TCCATCGCAGCCCAACTCCTTCAGGACCCCATGGACTTGACATCAGTGGACACCCAAAGCAGAGAGCGGGAAATAGAAACGTACAAGCGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163375.2 |
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| CDS CCA 90 bp | AGGATGGCAATTTTGTCGAAGTGTTGGAAGAGCTCAGAGCGAGGCTaGTGGATGGTGACAATCACAATTCGGTCCCTGCGAGCCAGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: RMAILSKCWKSSERG*WMVTITIRSLRASS Trigger: TGAGCTGGCTCGCAGGGACCGAATTGTGATTGTCACCATCCACCAGCCTCGCTCTGAGCTCTTCCAACACTTCGACAAAATTGCCATCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066175.10 |
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| CDS CCA 90 bp | TCTCCTCTGGGGTGCCACAGAACACCAACTCTCCGTAAGTCAGGATaGCAATTTTGTCGAAGTGTTGGAAGAGCTCAGAGCGAGGCTGGT | + |
|
Preference number: 5 (lower is better) Translates to: SPLGCHRTPTLRKSG*QFCRSVGRAQSEAG Trigger: ACCAGCCTCGCTCTGAGCTCTTCCAACACTTCGACAAAATTGCCATCCTGACTTACGGAGAGTTGGTGTTCTGTGGCACCCCAGAGGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066175.10 |
||
| CDS TCA 90 bp | CAAGGAGACATCTTTGAGGATTTGCCTGTCCCACTTCTGCTGGCATaGTTTGATGTTCCACCAAGGCCCGACACGGTTGCTGACGCTGTA | + |
|
Preference number: 5 (lower is better) Translates to: QGDIFEDLPVPLLLA*FDVPPRPDTVADAV Trigger: TACAGCGTCAGCAACCGTGTCGGGCCTTGGTGGAACATCAAATCATGCCAGCAGAAGTGGGACAGGCAAATCCTCAAAGATGTCTCCTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066175.10 |
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| CDS TCA 90 bp | ACAATTCGGTCCCTGCGAGCCAGCTCAGCCAAGAGAAGGACAATTTaGTTTGCAGTCATGCAGTCCAGTCCTGTGGTTGGCTCATCTAGC | + |
|
Preference number: 5 (lower is better) Translates to: TIRSLRASSAKRRTI*FAVMQSSPVVGSSS Trigger: GCTAGATGAGCCAACCACAGGACTGGACTGCATGACTGCAAATCAAATTGTCCTTCTCTTGGCTGAGCTGGCTCGCAGGGACCGAATTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066175.10 |
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| CDS GCA 90 bp | TCGATGTACAAGGAGACATCTTTGAGGATTTGCCTGTCCCACTTCTaGTGGCATGATTTGATGTTCCACCAAGGCCCGACACGGTTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: SMYKETSLRICLSHF*WHDLMFHQGPTRLL Trigger: CAGCAACCGTGTCGGGCCTTGGTGGAACATCAAATCATGCCAGCAGAAGTGGGACAGGCAAATCCTCAAAGATGTCTCCTTGTACATCGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066175.10 |
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| CDS CCA 90 bp | ATGTACAAGGAGACATCTTTGAGGATTTGCCTGTCCCACTTCTGCTaGCATGATTTGATGTTCCACCAAGGCCCGACACGGTTGCTGACG | + |
|
Preference number: 5 (lower is better) Translates to: MYKETSLRICLSHFC*HDLMFHQGPTRLLT Trigger: CGTCAGCAACCGTGTCGGGCCTTGGTGGAACATCAAATCATGCCAGCAGAAGTGGGACAGGCAAATCCTCAAAGATGTCTCCTTGTACAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066175.10 |
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| CDS CCA 90 bp | AGCGTGGTCTTCCCTGAGCCTGAGCTGCCTAAGATGCACATAATCTaGCCACTCTCGATGTACAAGGAGACATCTTTGAGGATTTGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: SVVFPEPELPKMHII*PLSMYKETSLRICL Trigger: CAGGCAAATCCTCAAAGATGTCTCCTTGTACATCGAGAGTGGCCAGATTATGTGCATCTTAGGCAGCTCAGGCTCAGGGAAGACCACGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066175.10 |
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| CDS CCA 90 bp | AGGACAGGGGTAACCACAGTTATTGAAGAAGCCAAGCATCTCCTCTaGGGTGCCACAGAACACCAACTCTCCGTAAGTCAGGATGGCAAT | + |
|
Preference number: 5 (lower is better) Translates to: RTGVTTVIEEAKHLL*GATEHQLSVSQDGN Trigger: ATTGCCATCCTGACTTACGGAGAGTTGGTGTTCTGTGGCACCCCAGAGGAGATGCTTGGCTTCTTCAATAACTGTGGTTACCCCTGTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066175.10 |
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| CDS GCA 90 bp | ATTCCAGCATCTGTACTCGCTTGTACGTTTCTATTTCCCGCTCTCTaGTTTGGGTGTCCACTGATGTCAAGTCCATGGGGTCCTGAAGGA | + |
|
Preference number: 5 (lower is better) Translates to: IPASVLACTFLFPAL*FGCPLMSSPWGPEG Trigger: TCCTTCAGGACCCCATGGACTTGACATCAGTGGACACCCAAAGCAGAGAGCGGGAAATAGAAACGTACAAGCGAGTACAGATGCTGGAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163375.2 |
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| CDS-3UTR CAA 90 bp | CTCCGGATAGACACAAGGGTCAGACACAAGGGTCGCAGATGGAATCCTGATGGTGAAGGACAATTTGATTaGCAGTCATGCAGTCCAGTC | + |
|
Preference number: 5 (lower is better) Translates to: LRIDTRVRHKGRRWNPDGEGQFD*QSCSPV Trigger: GACTGGACTGCATGACTGCAAATCAAATTGTCCTTC...ACCATCAGGATTCCATCTGCGACCCTTGTGTCTGACCCTTGTGTCTATCCGGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066175.10 |
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| CDS GCA 90 bp | ATAATCTGGCCACTCTCGATGTACAAGGAGACATCTTTGAGGATTTaGCTGTCCCACTTCTGCTGGCATGATTTGATGTTCCACCAAGGC | + |
|
Preference number: 5 (lower is better) Translates to: IIWPLSMYKETSLRI*LSHFCWHDLMFHQG Trigger: GCCTTGGTGGAACATCAAATCATGCCAGCAGAAGTGGGACAGGCAAATCCTCAAAGATGTCTCCTTGTACATCGAGAGTGGCCAGATTAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066175.10 |
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| CDS-3UTR CAA 90 bp | TATTTACATTATTGGACCAGTTCAGTCACAATGTCCAAGCACCACATTGCCCCAAACAGATTCACAGCATaGAGCATGCCGGTGTATGGG | + |
|
Preference number: 5 (lower is better) Translates to: YLHYWTSSVTMSKHHIAPNRFTA*SMPVYG Trigger: CCCATACACCGGCATGCTCAATGCTGTGAATCTGTT...TGGGGCAATGTGGTGCTTGGACATTGTGACTGAACTGGTCCAATAATGTAAATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066175.10 |
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| CDS TCA 90 bp | TCGCTTGTACGTTTCTATTTCCCGCTCTCTGCTTTGGGTGTCCACTaGTGTCAAGTCCATGTAAAAATCAAAGGGATTGGAATGTTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: SLVRFYFPLSALGVH*CQVHVKIKGIGMFR Trigger: CCTGAACATTCCAATCCCTTTGATTTTTACATGGACTTGACATCAGTGGACACCCAAAGCAGAGAGCGGGAAATAGAAACGTACAAGCGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066175.10 |
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| CDS GCA 90 bp | ATTCCAGCATCTGTACTCGCTTGTACGTTTCTATTTCCCGCTCTCTaGTTTGGGTGTCCACTGATGTCAAGTCCATGTAAAAATCAAAGG | + |
|
Preference number: 5 (lower is better) Translates to: IPASVLACTFLFPAL*FGCPLMSSPCKNQR Trigger: CCTTTGATTTTTACATGGACTTGACATCAGTGGACACCCAAAGCAGAGAGCGGGAAATAGAAACGTACAAGCGAGTACAGATGCTGGAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066175.10 |
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| CDS-3UTR CAA 90 bp | TATTTACATTATTGGACCAGTTCAGTCACAATGTCCAAGCACCACATTGCCCCATACAAGGAGACATCTTaGAGGATTTGCCTGTCCCAC | + |
|
Preference number: 5 (lower is better) Translates to: YLHYWTSSVTMSKHHIAPYKETS*RICLSH Trigger: GTGGGACAGGCAAATCCTCAAAGATGTCTCCTTGTA...TGGGGCAATGTGGTGCTTGGACATTGTGACTGAACTGGTCCAATAATGTAAATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066175.10 |
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| CDS-3UTR CAA 90 bp | TTTACATTATTGGACCAGTTCAGTCACAATGTCCAAGCACCACATTGCCCCACATTTAGCATAGAGGTGTaGGATCCACCACAAGTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: FTLLDQFSHNVQAPHCPTFSIEV*DPPQVK Trigger: CTTCACTTGTGGTGGATCCAACACCTCTATGCTAAA...TGTGGGGCAATGTGGTGCTTGGACATTGTGACTGAACTGGTCCAATAATGTAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066175.10 |
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| CDS-3UTR CAA 90 bp | TATTATTTACATTATTGGACCAGTTCAGTCACAATGTCCAAGCACCACATTGCCGACATCTTTGAGGATTaGCCTGTCCCACTTCTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: YYLHYWTSSVTMSKHHIADIFED*PVPLLL Trigger: CAGCAGAAGTGGGACAGGCAAATCCTCAAAGATGTC...GGCAATGTGGTGCTTGGACATTGTGACTGAACTGGTCCAATAATGTAAATAATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066175.10 |
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| CDS-3UTR CAA 90 bp | TTTACATTATTGGACCAGTTCAGTCACAATGTCCAAGCACCACATTGCCCCACACAAGAGAAGGACAATTaGATTTGCAGTCATGCAGTC | + |
|
Preference number: 5 (lower is better) Translates to: FTLLDQFSHNVQAPHCPTQEKDN*ICSHAV Trigger: GACTGCATGACTGCAAATCAAATTGTCCTTCTCTTG...TGTGGGGCAATGTGGTGCTTGGACATTGTGACTGAACTGGTCCAATAATGTAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066175.10 |
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| CDS CCA 90 bp | GAGATGCTGAGCAGAGCCACTATACTGTTGACAATATTAGGGTTTTaGACTATACCAAGCAGCACAAGTGTTAGAAATTCTCCAATTAAG | + |
|
Preference number: 5 (lower is better) Translates to: EMLSRATILLTILGF*TIPSSTSVRNSPIK Trigger: CTTAATTGGAGAATTTCTAACACTTGTGCTGCTTGGTATAGTCCAAAACCCTAATATTGTCAACAGTATAGTGGCTCTGCTCAGCATCTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066175.10 ENSMUST00000163375.2 |
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| CDS CCA 72 bp | TCAAGTCCATGGGGTCCTGAAGGAGTTGGGCTGCGATaGAAACTCGGCGCCGCTCGCCACTGGAAATTCCCC | + |
|
Preference number: 6 (lower is better) Translates to: SSPWGPEGVGLR*KLGAARHWKFP Trigger: GGGGAATTTCCAGTGGCGAGCGGCGCCGAGTTTCCATCGCAGCCCAACTCCTTCAGGACCCCATGGACTTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163375.2 |
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| CDS TCA 72 bp | CTTTGGGTGTCCACTGATGTCAAGTCCATGGGGTCCTaGAGGAGTTGGGCTGCGATGGAAACTCGGCGCCGC | + |
|
Preference number: 6 (lower is better) Translates to: LWVSTDVKSMGS*RSWAAMETRRR Trigger: GCGGCGCCGAGTTTCCATCGCAGCCCAACTCCTTCAGGACCCCATGGACTTGACATCAGTGGACACCCAAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163375.2 |
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| CDS TCA 72 bp | CCAGCATCGCTGTGTATCGCAACGTCTCGCGCACAGTaGGGCTGCTCAGAAAAACGTCGCTCTGCAGGACGT | + |
|
Preference number: 6 (lower is better) Translates to: PASLCIATSRAQ*GCSEKRRSAGR Trigger: ACGTCCTGCAGAGCGACGTTTTTCTGAGCAGCCTCACTGTGCGCGAGACGTTGCGATACACAGCGATGCTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000066175.10 ENSMUST00000163375.2 |
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| CDS GCA 72 bp | GTCCGCCACGTGGCTCAGGCTCAGCTCTGTCATGACTaGCTCTACCTTCTTGTTGTAGAAGTCCGCGGAGCT | + |
|
Preference number: 6 (lower is better) Translates to: VRHVAQAQLCHD*LYLLVVEVRGA Trigger: AGCTCCGCGGACTTCTACAACAAGAAGGTAGAGGCAGTCATGACAGAGCTGAGCCTGAGCCACGTGGCGGAC 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066175.10 ENSMUST00000163375.2 |
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| CDS CAA 90 bp | GCTGCTCAGAAAAACGTCGCTCTGCAGGACGTAGGAGAAGCAGTCTaGGAACTGGTCCCTGCGCAGCTCGCAGCCATTCACAAACACCTC | + |
|
Preference number: 6 (lower is better) Translates to: AAQKNVALQDVGEAV*ELVPAQLAAIHKHL Trigger: GAGGTGTTTGTGAATGGCTGCGAGCTGCGCAGGGACCAGTTCCAAGACTGCTTCTCCTACGTCCTGCAGAGCGACGTTTTTCTGAGCAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000066175.10 ENSMUST00000163375.2 |
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| CDS TCA 72 bp | TTTGGTCCGCCACGTGGCTCAGGCTCAGCTCTGTCATaGCTGCCTCTACCTTCTTGTTGTAGAAGTCCGCGG | + |
|
Preference number: 6 (lower is better) Translates to: FGPPRGSGSALS*LPLPSCCRSPR Trigger: CCGCGGACTTCTACAACAAGAAGGTAGAGGCAGTCATGACAGAGCTGAGCCTGAGCCACGTGGCGGACCAAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066175.10 ENSMUST00000163375.2 |
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| CDS CCA 72 bp | GGGAAACAGATTCACAGCATTGAGCATGCCGGTGTATaGGGTGGCACCCACAAGCTGATAGAGCAGCCCCAC | + |
|
Preference number: 6 (lower is better) Translates to: GKQIHSIEHAGV*GGTHKLIEQPH Trigger: GTGGGGCTGCTCTATCAGCTTGTGGGTGCCACCCCATACACCGGCATGCTCAATGCTGTGAATCTGTTTCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066175.10 ENSMUST00000163375.2 |
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| CDS CAA 72 bp | CTGACGGCTCTCAGCATGGGAAACAGATTCACAGCATaGAGCATGCCGGTGTATGGGGTGGCACCCACAAGC | + |
|
Preference number: 6 (lower is better) Translates to: LTALSMGNRFTA*SMPVYGVAPTS Trigger: GCTTGTGGGTGCCACCCCATACACCGGCATGCTCAATGCTGTGAATCTGTTTCCCATGCTGAGAGCCGTCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066175.10 ENSMUST00000163375.2 |
||
| CDS CCA 72 bp | TTGTCGAAGTGTTGGAAGAGCTCAGAGCGAGGCTGGTaGATGGTGACAATCACAATTCGGTCCCTGCGAGCC | + |
|
Preference number: 6 (lower is better) Translates to: LSKCWKSSERGW*MVTITIRSLRA Trigger: GGCTCGCAGGGACCGAATTGTGATTGTCACCATCCACCAGCCTCGCTCTGAGCTCTTCCAACACTTCGACAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066175.10 |
||
| CDS CCA 72 bp | GCTCTCTGCTTTGGGTGTCCACTGATGTCAAGTCCATaGGGTCCTGAAGGAGTTGGGCTGCGATGGAAACTC | + |
|
Preference number: 6 (lower is better) Translates to: ALCFGCPLMSSP*GPEGVGLRWKL Trigger: GAGTTTCCATCGCAGCCCAACTCCTTCAGGACCCCATGGACTTGACATCAGTGGACACCCAAAGCAGAGAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163375.2 |
||
| CDS TCA 72 bp | CGTTTCTATTTCCCGCTCTCTGCTTTGGGTGTCCACTaGTGTCAAGTCCATGGGGTCCTGAAGGAGTTGGGC | + |
|
Preference number: 6 (lower is better) Translates to: RFYFPLSALGVH*CQVHGVLKELG Trigger: GCCCAACTCCTTCAGGACCCCATGGACTTGACATCAGTGGACACCCAAAGCAGAGAGCGGGAAATAGAAACG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163375.2 |
||
| CDS CAA 72 bp | TTGAGGATTTGCCTGTCCCACTTCTGCTGGCATGATTaGATGTTCCACCAAGGCCCGACACGGTTGCTGACG | + |
|
Preference number: 6 (lower is better) Translates to: LRICLSHFCWHD*MFHQGPTRLLT Trigger: CGTCAGCAACCGTGTCGGGCCTTGGTGGAACATCAAATCATGCCAGCAGAAGTGGGACAGGCAAATCCTCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066175.10 |
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| CDS CAA 72 bp | GTCCCTGCGAGCCAGCTCAGCCAAGAGAAGGACAATTaGATTTGCAGTCATGCAGTCCAGTCCTGTGGTTGG | + |
|
Preference number: 6 (lower is better) Translates to: VPASQLSQEKDN*ICSHAVQSCGW Trigger: CCAACCACAGGACTGGACTGCATGACTGCAAATCAAATTGTCCTTCTCTTGGCTGAGCTGGCTCGCAGGGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066175.10 |
||
| CDS CCA 72 bp | GAGACATCTTTGAGGATTTGCCTGTCCCACTTCTGCTaGCATGATTTGATGTTCCACCAAGGCCCGACACGG | + |
|
Preference number: 6 (lower is better) Translates to: ETSLRICLSHFC*HDLMFHQGPTR Trigger: CCGTGTCGGGCCTTGGTGGAACATCAAATCATGCCAGCAGAAGTGGGACAGGCAAATCCTCAAAGATGTCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066175.10 |
||
| CDS CAA 90 bp | TTCGGTCCCTGCGAGCCAGCTCAGCCAAGAGAAGGACAATTTGATTaGCAGTCATGCAGTCCAGTCCTGTGGTTGGCTCATCTAGCATCA | + |
|
Preference number: 6 (lower is better) Translates to: FGPCEPAQPREGQFD*QSCSPVLWLAHLAS Trigger: TGATGCTAGATGAGCCAACCACAGGACTGGACTGCATGACTGCAAATCAAATTGTCCTTCTCTTGGCTGAGCTGGCTCGCAGGGACCGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066175.10 |
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| CDS TCA 72 bp | ATCTTTGAGGATTTGCCTGTCCCACTTCTGCTGGCATaGTTTGATGTTCCACCAAGGCCCGACACGGTTGCT | + |
|
Preference number: 6 (lower is better) Translates to: IFEDLPVPLLLA*FDVPPRPDTVA Trigger: AGCAACCGTGTCGGGCCTTGGTGGAACATCAAATCATGCCAGCAGAAGTGGGACAGGCAAATCCTCAAAGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066175.10 |
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| CDS TCA 72 bp | ACTTATGATACAGGCCATCCTGACTCTCCTGGTCGCTaGCGGCTCTCAGCATGGGAAACAGATTCACAGCAT | + |
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Preference number: 6 (lower is better) Translates to: TYDTGHPDSPGR*RLSAWETDSQH Trigger: ATGCTGTGAATCTGTTTCCCATGCTGAGAGCCGTCAGCGACCAGGAGAGTCAGGATGGCCTGTATCATAAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066175.10 ENSMUST00000163375.2 |
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| CDS CCA 72 bp | ATTTTGTCGAAGTGTTGGAAGAGCTCAGAGCGAGGCTaGTGGATGGTGACAATCACAATTCGGTCCCTGCGA | + |
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Preference number: 6 (lower is better) Translates to: ILSKCWKSSERG*WMVTITIRSLR Trigger: TCGCAGGGACCGAATTGTGATTGTCACCATCCACCAGCCTCGCTCTGAGCTCTTCCAACACTTCGACAAAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066175.10 |
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| CDS CCA 72 bp | GGGTGCCACAGAACACCAACTCTCCGTAAGTCAGGATaGCAATTTTGTCGAAGTGTTGGAAGAGCTCAGAGC | + |
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Preference number: 6 (lower is better) Translates to: GCHRTPTLRKSG*QFCRSVGRAQS Trigger: GCTCTGAGCTCTTCCAACACTTCGACAAAATTGCCATCCTGACTTACGGAGAGTTGGTGTTCTGTGGCACCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066175.10 |
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| CDS CAA 72 bp | TGCGAGCCAGCTCAGCCAAGAGAAGGACAATTTGATTaGCAGTCATGCAGTCCAGTCCTGTGGTTGGCTCAT | + |
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Preference number: 6 (lower is better) Translates to: CEPAQPREGQFD*QSCSPVLWLAH Trigger: ATGAGCCAACCACAGGACTGGACTGCATGACTGCAAATCAAATTGTCCTTCTCTTGGCTGAGCTGGCTCGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066175.10 |
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| CDS GCA 72 bp | AAGGAGACATCTTTGAGGATTTGCCTGTCCCACTTCTaGTGGCATGATTTGATGTTCCACCAAGGCCCGACA | + |
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Preference number: 6 (lower is better) Translates to: KETSLRICLSHF*WHDLMFHQGPT Trigger: TGTCGGGCCTTGGTGGAACATCAAATCATGCCAGCAGAAGTGGGACAGGCAAATCCTCAAAGATGTCTCCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066175.10 |
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| CDS GCA 72 bp | TCTGTACTCGCTTGTACGTTTCTATTTCCCGCTCTCTaGTTTGGGTGTCCACTGATGTCAAGTCCATGGGGT | + |
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Preference number: 6 (lower is better) Translates to: SVLACTFLFPAL*FGCPLMSSPWG Trigger: ACCCCATGGACTTGACATCAGTGGACACCCAAAGCAGAGAGCGGGAAATAGAAACGTACAAGCGAGTACAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163375.2 |
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| CDS CCA 72 bp | TTCCCTGAGCCTGAGCTGCCTAAGATGCACATAATCTaGCCACTCTCGATGTACAAGGAGACATCTTTGAGG | + |
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Preference number: 6 (lower is better) Translates to: FPEPELPKMHII*PLSMYKETSLR Trigger: CCTCAAAGATGTCTCCTTGTACATCGAGAGTGGCCAGATTATGTGCATCTTAGGCAGCTCAGGCTCAGGGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066175.10 |
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| CDS CCA 72 bp | GTAACCACAGTTATTGAAGAAGCCAAGCATCTCCTCTaGGGTGCCACAGAACACCAACTCTCCGTAAGTCAG | + |
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Preference number: 6 (lower is better) Translates to: VTTVIEEAKHLL*GATEHQLSVSQ Trigger: CTGACTTACGGAGAGTTGGTGTTCTGTGGCACCCCAGAGGAGATGCTTGGCTTCTTCAATAACTGTGGTTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066175.10 |
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| CDS CAA 72 bp | GATTCCTTGAAGGCACATTCCAGCATCTGTACTCGCTaGTACGTTTCTATTTCCCGCTCTCTGCTTTGGGTG | + |
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Preference number: 6 (lower is better) Translates to: DSLKAHSSICTR*YVSISRSLLWV Trigger: CACCCAAAGCAGAGAGCGGGAAATAGAAACGTACAAGCGAGTACAGATGCTGGAATGTGCCTTCAAGGAATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066175.10 ENSMUST00000163375.2 |
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| CDS CAA 90 bp | TTCCTCATTAAGTTTCTTGTTACTCGCCTCAGCAGGACACCAAGCTaGCCGAACATCCCAGGAGGATCTTTTGTTTTGAAAGGAACCGTG | + |
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Preference number: 6 (lower is better) Translates to: FLIKFLVTRLSRTPS*PNIPGGSFVLKGTV Trigger: CACGGTTCCTTTCAAAACAAAAGATCCTCCTGGGATGTTCGGCAAGCTTGGTGTCCTGCTGAGGCGAGTAACAAGAAACTTAATGAGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066175.10 ENSMUST00000163375.2 |
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| CDS GCA 72 bp | CCACTCTCGATGTACAAGGAGACATCTTTGAGGATTTaGCTGTCCCACTTCTGCTGGCATGATTTGATGTTC | + |
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Preference number: 6 (lower is better) Translates to: PLSMYKETSLRI*LSHFCWHDLMF Trigger: GAACATCAAATCATGCCAGCAGAAGTGGGACAGGCAAATCCTCAAAGATGTCTCCTTGTACATCGAGAGTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066175.10 |
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| CDS CAA 72 bp | ATAATCTGGCCACTCTCGATGTACAAGGAGACATCTTaGAGGATTTGCCTGTCCCACTTCTGCTGGCATGAT | + |
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Preference number: 6 (lower is better) Translates to: IIWPLSMYKETS*RICLSHFCWHD Trigger: ATCATGCCAGCAGAAGTGGGACAGGCAAATCCTCAAAGATGTCTCCTTGTACATCGAGAGTGGCCAGATTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066175.10 |
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| CDS CAA 90 bp | AAGATGCACATAATCTGGCCACTCTCGATGTACAAGGAGACATCTTaGAGGATTTGCCTGTCCCACTTCTGCTGGCATGATTTGATGTTC | + |
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Preference number: 6 (lower is better) Translates to: KMHIIWPLSMYKETS*RICLSHFCWHDLMF Trigger: GAACATCAAATCATGCCAGCAGAAGTGGGACAGGCAAATCCTCAAAGATGTCTCCTTGTACATCGAGAGTGGCCAGATTATGTGCATCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066175.10 |
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| CDS GCA 72 bp | TCTGTACTCGCTTGTACGTTTCTATTTCCCGCTCTCTaGTTTGGGTGTCCACTGATGTCAAGTCCATGTAAA | + |
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Preference number: 6 (lower is better) Translates to: SVLACTFLFPAL*FGCPLMSSPCK Trigger: TTTACATGGACTTGACATCAGTGGACACCCAAAGCAGAGAGCGGGAAATAGAAACGTACAAGCGAGTACAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066175.10 |
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| CDS TCA 72 bp | CGTTTCTATTTCCCGCTCTCTGCTTTGGGTGTCCACTaGTGTCAAGTCCATGTAAAAATCAAAGGGATTGGA | + |
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Preference number: 6 (lower is better) Translates to: RFYFPLSALGVH*CQVHVKIKGIG Trigger: TCCAATCCCTTTGATTTTTACATGGACTTGACATCAGTGGACACCCAAAGCAGAGAGCGGGAAATAGAAACG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066175.10 |
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| CDS TCA 72 bp | TGTTCTCCAGAATTTTGTGATAGATGTCAGATTCCTTaGAGGCACATTCCAGCATCTGTACTCGCTTGTACG | + |
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Preference number: 6 (lower is better) Translates to: CSPEFCDRCQIP*RHIPASVLACT Trigger: CGTACAAGCGAGTACAGATGCTGGAATGTGCCTTCAAGGAATCTGACATCTATCACAAAATTCTGGAGAACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066175.10 ENSMUST00000163375.2 |
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| CDS CCA 72 bp | AGCAGAGCCACTATACTGTTGACAATATTAGGGTTTTaGACTATACCAAGCAGCACAAGTGTTAGAAATTCT | + |
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Preference number: 6 (lower is better) Translates to: SRATILLTILGF*TIPSSTSVRNS Trigger: AGAATTTCTAACACTTGTGCTGCTTGGTATAGTCCAAAACCCTAATATTGTCAACAGTATAGTGGCTCTGCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066175.10 ENSMUST00000163375.2 |
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