Pregenerated sensors for ABCG3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029299Ensembl transcript IDs: ENSMUST00000031239.13, ENSMUST00000130644.2
Found 108 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GTTCTGTTGGAGATAAACATTTGCGTGTTCCTTAGCCTTGTACTGTaGGCAGCCATAAGTCTCTGCATTCACACAGTTCACAGAAGAGGG | + |
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Preference number: 1 (lower is better) Translates to: VLLEINICVFLSLVL*AAISLCIHTVHRRG Trigger: CCCTCTTCTGTGAACTGTGTGAATGCAGAGACTTATGGCTGCTCACAGTACAAGGCTAAGGAACACGCAAATGTTTATCTCCAACAGAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031239.13 ENSMUST00000130644.2 |
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| 3UTR TCA 90 bp | AAGCTGTGGAGTTGGGACACAGACCACGGTTGCTATGTCTGTTCATaGCCACAATACTGCATTTCCATTCCTTCTTTTCATCATCTGGCT | + |
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Preference number: 1 (lower is better) Translates to: KLWSWDTDHGCYVCS*PQYCISIPSFHHLA Trigger: AGCCAGATGATGAAAAGAAGGAATGGAAATGCAGTATTGTGGTCATGAACAGACATAGCAACCGTGGTCTGTGTCCCAACTCCACAGCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031239.13 |
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| 3UTR GCA 90 bp | ACCACAATACTGCATTTCCATTCCTTCTTTTCATCATCTGGCTCTTaGACTCTTTCTCCCATATTCCACAATGCTCTAAGCTATAGAGGG | + |
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Preference number: 1 (lower is better) Translates to: TTILHFHSFFSSSGS*TLSPIFHNALSYRG Trigger: CCCTCTATAGCTTAGAGCATTGTGGAATATGGGAGAAAGAGTGCAAGAGCCAGATGATGAAAAGAAGGAATGGAAATGCAGTATTGTGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031239.13 |
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| 3UTR TCA 90 bp | CACACTATGATCCAACTCTGTAGACTTCACGGTGTCATTCCTTTCTaGATCTATAATGCTGCTCTCTTCAACAGGCAAAAGCATGTTTCA | + |
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Preference number: 1 (lower is better) Translates to: HTMIQLCRLHGVIPF*IYNAALFNRQKHVS Trigger: TGAAACATGCTTTTGCCTGTTGAAGAGAGCAGCATTATAGATTCAGAAAGGAATGACACCGTGAAGTCTACAGAGTTGGATCATAGTGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130644.2 |
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| 3UTR-3UTR TCA 90 bp | CCCCCAGGGTTTAAACAGGGCTGTCTGTGTGATGAAGGGTTTCAGACTTTCCACGGTGGATGGGATCATTaGGGTCCCCTCTGTTCCTTC | + |
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Preference number: 2 (lower is better) Translates to: PPGFKQGCLCDEGFQTFHGGWDH*GPLCSF Trigger: GAAGGAACAGAGGGGACCTCAATGATCCCATCCACC...GTGGAAAGTCTGAAACCCTTCATCACACAGACAGCCCTGTTTAAACCCTGGGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031239.13 |
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| 3UTR-3UTR GCA 90 bp | AACTTGGGGAGTTTACAGAGTCACACTATGATCCAACTCTGTAGACTTCACGGTGCAGCCATAAGTCTCTaGATTCACACAGTTCACAGA | + |
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Preference number: 2 (lower is better) Translates to: NLGSLQSHTMIQLCRLHGAAISL*IHTVHR Trigger: TCTGTGAACTGTGTGAATGCAGAGACTTATGGCTGC...ACCGTGAAGTCTACAGAGTTGGATCATAGTGTGACTCTGTAAACTCCCCAAGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130644.2 |
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| 3UTR-3UTR GCA 90 bp | GATTCCTGTAGGCTCAAATGTGAGTGTAAATGTGAATCAATGACTGCCTCTCTCGCAGCCATAAGTCTCTaGATTCACACAGTTCACAGA | + |
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Preference number: 2 (lower is better) Translates to: DSCRLKCECKCESMTASLAAISL*IHTVHR Trigger: TCTGTGAACTGTGTGAATGCAGAGACTTATGGCTGC...GAGAGAGGCAGTCATTGATTCACATTTACACTCACATTTGAGCCTACAGGAATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031239.13 |
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| 3UTR CAA 90 bp | CTGCCATATCCACTTAAAAGCATACAGGATGAAGGCCTAATAAACTaGGGGAGTTTACAGAGTCACACTATGATCCAACTCTGTAGACTT | + |
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Preference number: 2 (lower is better) Translates to: LPYPLKSIQDEGLIN*GSLQSHTMIQLCRL Trigger: AAGTCTACAGAGTTGGATCATAGTGTGACTCTGTAAACTCCCCAAGTTTATTAGGCCTTCATCCTGTATGCTTTTAAGTGGATATGGCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000130644.2 |
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| 3UTR-3UTR TCA 90 bp | GGATCCTCTCAGTGGCATTTGTCCACGAGTATAATTATTAATGTTCAGAGGATTTACAGAGTCACACTATaGTCCAACTCTGTAGACTTC | + |
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Preference number: 2 (lower is better) Translates to: GSSQWHLSTSIIINVQRIYRVTL*SNSVDF Trigger: GAAGTCTACAGAGTTGGATCATAGTGTGACTCTGTA...AATCCTCTGAACATTAATAATTATACTCGTGGACAAATGCCACTGAGAGGATCC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130644.2 |
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| 3UTR GCA 72 bp | GGTGATTCTCCCAGAAGCCCCACGATGAGAGATCAATaGCCTGGATCATCAAGAATTCTTCACCAGTACATC | + |
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Preference number: 3 (lower is better) Translates to: GDSPRSPTMRDQ*PGSSRILHQYI Trigger: GATGTACTGGTGAAGAATTCTTGATGATCCAGGGCATTGATCTCTCATCGTGGGGCTTCTGGGAGAATCACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130644.2 |
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| 3UTR-3UTR CAA 90 bp | AAACTAAAGCCAGGTGATTCTCCCAGAAGCCCCACGATGAGAGATCAATGCCCTGCTATAGGTGTTCTGTaGGAGATAAACATTTGCGTG | + |
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Preference number: 3 (lower is better) Translates to: KLKPGDSPRSPTMRDQCPAIGVL*EINICV Trigger: CACGCAAATGTTTATCTCCAACAGAACACCTATAGC...AGGGCATTGATCTCTCATCGTGGGGCTTCTGGGAGAATCACCTGGCTTTAGTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130644.2 |
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| 3UTR-3UTR CAA 90 bp | ACAGTTCACAGAAGAGGGATCCTCTCAGTGGCATTTGTCCACGAGTATAATTATGGACACAGACCACGGTaGCTATGTCTGTTCATGACC | + |
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Preference number: 3 (lower is better) Translates to: TVHRRGILSVAFVHEYNYGHRPR*LCLFMT Trigger: GGTCATGAACAGACATAGCAACCGTGGTCTGTGTCC...ATAATTATACTCGTGGACAAATGCCACTGAGAGGATCCCTCTTCTGTGAACTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031239.13 |
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| 3UTR TCA 72 bp | CTCTGTCCCACCTCTCTCATCTCCCTTACACTCCCTTaGCATACTCCTCTTTACAAGTGTCTTTCTCACCTT | + |
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Preference number: 3 (lower is better) Translates to: LCPTSLISLTLP*HTPLYKCLSHL Trigger: AAGGTGAGAAAGACACTTGTAAAGAGGAGTATGTCAAGGGAGTGTAAGGGAGATGAGAGAGGTGGGACAGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031239.13 |
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| 3UTR-3UTR CAA 90 bp | AAACTAAAGCCAGGTGATTCTCCCAGAAGCCCCACGATGAGAGATCAATGCCCTGTGAGGCAGTCACCATaGTTAATTTCAAAAACTATC | + |
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Preference number: 3 (lower is better) Translates to: KLKPGDSPRSPTMRDQCPVRQSP*LISKTI Trigger: GATAGTTTTTGAAATTAACAATGGTGACTGCCTCAC...AGGGCATTGATCTCTCATCGTGGGGCTTCTGGGAGAATCACCTGGCTTTAGTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000130644.2 |
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| 3UTR TCA 72 bp | AGTTGGGACACAGACCACGGTTGCTATGTCTGTTCATaGCCACAATACTGCATTTCCATTCCTTCTTTTCAT | + |
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Preference number: 3 (lower is better) Translates to: SWDTDHGCYVCS*PQYCISIPSFH Trigger: ATGAAAAGAAGGAATGGAAATGCAGTATTGTGGTCATGAACAGACATAGCAACCGTGGTCTGTGTCCCAACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031239.13 |
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| 3UTR-3UTR CAA 90 bp | AACTTGGGGAGTTTACAGAGTCACACTATGATCCAACTCTGTAGACTTCACGGTTCCTCTCAGTGGCATTaGTCCACGAGTATAATTATT | + |
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Preference number: 3 (lower is better) Translates to: NLGSLQSHTMIQLCRLHGSSQWH*STSIII Trigger: AATAATTATACTCGTGGACAAATGCCACTGAGAGGA...ACCGTGAAGTCTACAGAGTTGGATCATAGTGTGACTCTGTAAACTCCCCAAGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130644.2 |
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| 3UTR-3UTR CAA 90 bp | GATTCCTGTAGGCTCAAATGTGAGTGTAAATGTGAATCAATGACTGCCTCTCTCGCTATAGGTGTTCTGTaGGAGATAAACATTTGCGTG | + |
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Preference number: 3 (lower is better) Translates to: DSCRLKCECKCESMTASLAIGVL*EINICV Trigger: CACGCAAATGTTTATCTCCAACAGAACACCTATAGC...GAGAGAGGCAGTCATTGATTCACATTTACACTCACATTTGAGCCTACAGGAATC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031239.13 |
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| 3UTR-3UTR CAA 90 bp | ACAGTTCACAGAAGAGGGATCCTCTCAGTGGCATTTGTCCACGAGTATAATTATCTCACCTTCACAACTTaGGTATTATCATGTGACCAC | + |
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Preference number: 3 (lower is better) Translates to: TVHRRGILSVAFVHEYNYLTFTT*VLSCDH Trigger: GTGGTCACATGATAATACCAAAGTTGTGAAGGTGAG...ATAATTATACTCGTGGACAAATGCCACTGAGAGGATCCCTCTTCTGTGAACTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031239.13 |
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| 3UTR TCA 72 bp | ATCCAACTCTGTAGACTTCACGGTGTCATTCCTTTCTaGATCTATAATGCTGCTCTCTTCAACAGGCAAAAG | + |
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Preference number: 3 (lower is better) Translates to: IQLCRLHGVIPF*IYNAALFNRQK Trigger: CTTTTGCCTGTTGAAGAGAGCAGCATTATAGATTCAGAAAGGAATGACACCGTGAAGTCTACAGAGTTGGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130644.2 |
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| 3UTR-3UTR CAA 90 bp | GACATACTCCTCTTTACAAGTGTCTTTCTCACCTTCACAACTTTGGTATTATCATTCATCATCTGGCTCTaGCACTCTTTCTCCCATATT | + |
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Preference number: 3 (lower is better) Translates to: DILLFTSVFLTFTTLVLSFIIWL*HSFSHI Trigger: AATATGGGAGAAAGAGTGCAAGAGCCAGATGATGAA...TGATAATACCAAAGTTGTGAAGGTGAGAAAGACACTTGTAAAGAGGAGTATGTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031239.13 |
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| CDS-3UTR TCA 90 bp | AAGCCAGGTGATTCTCCCAGAAGCCCCACGATGAGAGATCAATGCCCTGGATCAGATCTGCTCCCATCCTaGGGTCCCATAATGGCATTG | + |
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Preference number: 4 (lower is better) Translates to: KPGDSPRSPTMRDQCPGSDLLPS*GPIMAL Trigger: CAATGCCATTATGGGACCTCAGGATGGGAGCAGATC...TGATCCAGGGCATTGATCTCTCATCGTGGGGCTTCTGGGAGAATCACCTGGCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130644.2 |
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| CDS-3UTR TCA 90 bp | AAGCCAGGTGATTCTCCCAGAAGCCCCACGATGAGAGATCAATGCCCTGGATCATGGCCAGTTTTCCTGTaGCTTGATACTGTCTCTCAA | + |
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Preference number: 4 (lower is better) Translates to: KPGDSPRSPTMRDQCPGSWPVFL*LDTVSQ Trigger: TTGAGAGACAGTATCAAGTCACAGGAAAACTGGCCA...TGATCCAGGGCATTGATCTCTCATCGTGGGGCTTCTGGGAGAATCACCTGGCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000130644.2 |
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| CDS-3UTR TCA 90 bp | CCCCCAGGGTTTAAACAGGGCTGTCTGTGTGATGAAGGGTTTCAGACTTTCCACACTGTGATAATGGCCTaGATCACAGTGACCCATGGA | + |
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Preference number: 4 (lower is better) Translates to: PPGFKQGCLCDEGFQTFHTVIMA*ITVTHG Trigger: TCCATGGGTCACTGTGATTCAGGCCATTATCACAGT...GTGGAAAGTCTGAAACCCTTCATCACACAGACAGCCCTGTTTAAACCCTGGGGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031239.13 |
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| CDS-3UTR GCA 90 bp | CCCCCAGGGTTTAAACAGGGCTGTCTGTGTGATGAAGGGTTTCAGACTTTCCACCTCTCACGGTCACTGTaGCCAACACCACATCATTTT | + |
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Preference number: 4 (lower is better) Translates to: PPGFKQGCLCDEGFQTFHLSRSL*PTPHHF Trigger: AAAATGATGTGGTGTTGGGCACAGTGACCGTGAGAG...GTGGAAAGTCTGAAACCCTTCATCACACAGACAGCCCTGTTTAAACCCTGGGGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031239.13 |
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| CDS-3UTR CCA 90 bp | AAGCCAGGTGATTCTCCCAGAAGCCCCACGATGAGAGATCAATGCCCTGGATCACTCTGTAGTATCCACTaGTGTGCTCATGTCTCATCT | + |
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Preference number: 4 (lower is better) Translates to: KPGDSPRSPTMRDQCPGSLCSIH*CAHVSS Trigger: AGATGAGACATGAGCACACCAGTGGATACTACAGAG...TGATCCAGGGCATTGATCTCTCATCGTGGGGCTTCTGGGAGAATCACCTGGCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130644.2 |
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| CDS-3UTR TCA 90 bp | GCAGCCATAAGTCTCTGCATTCACACAGTTCACAGAAGAGGGATCCTCTCAGTGTGTTCTCCCAAGAGTTaGTCCAGGATGGCTCTTGTT | + |
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Preference number: 4 (lower is better) Translates to: AAISLCIHTVHRRGILSVCSPKS*SRMALV Trigger: AACAAGAGCCATCCTGGATCAACTCTTGGGAGAACA...CACTGAGAGGATCCCTCTTCTGTGAACTGTGTGAATGCAGAGACTTATGGCTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031239.13 ENSMUST00000130644.2 |
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| CDS-3UTR TCA 90 bp | ACAGTTCACAGAAGAGGGATCCTCTCAGTGGCATTTGTCCACGAGTATAATTATTGTTGTCTCCACGGCTaGGCTCCTCTCCAGCTTCTG | + |
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Preference number: 4 (lower is better) Translates to: TVHRRGILSVAFVHEYNYCCLHG*APLQLL Trigger: CAGAAGCTGGAGAGGAGCTCAGCCGTGGAGACAACA...ATAATTATACTCGTGGACAAATGCCACTGAGAGGATCCCTCTTCTGTGAACTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031239.13 ENSMUST00000130644.2 |
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| CDS-3UTR TCA 90 bp | ACCACAATACTGCATTTCCATTCCTTCTTTTCATCATCTGGCTCTTGCACTCTTTGTTGTCTCCACGGCTaGGCTCCTCTCCAGCTTCTG | + |
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Preference number: 4 (lower is better) Translates to: TTILHFHSFFSSSGSCTLCCLHG*APLQLL Trigger: CAGAAGCTGGAGAGGAGCTCAGCCGTGGAGACAACA...AAGAGTGCAAGAGCCAGATGATGAAAAGAAGGAATGGAAATGCAGTATTGTGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031239.13 |
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| CDS-3UTR TCA 90 bp | TCTCTGCATTCACACAGTTCACAGAAGAGGGATCCTCTCAGTGGCATTTGTCCATGGCCAGTTTTCCTGTaGCTTGATACTGTCTCTCAA | + |
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Preference number: 4 (lower is better) Translates to: SLHSHSSQKRDPLSGICPWPVFL*LDTVSQ Trigger: TTGAGAGACAGTATCAAGTCACAGGAAAACTGGCCA...TGGACAAATGCCACTGAGAGGATCCCTCTTCTGTGAACTGTGTGAATGCAGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031239.13 ENSMUST00000130644.2 |
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| CDS-3UTR TCA 90 bp | CCCCCAGGGTTTAAACAGGGCTGTCTGTGTGATGAAGGGTTTCAGACTTTCCACAGTTATGGCATCTACTaGCTTCTTCTGTGTTGTGTT | + |
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Preference number: 4 (lower is better) Translates to: PPGFKQGCLCDEGFQTFHSYGIY*LLLCCV Trigger: AACACAACACAGAAGAAGTCAGTAGATGCCATAACT...GTGGAAAGTCTGAAACCCTTCATCACACAGACAGCCCTGTTTAAACCCTGGGGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031239.13 |
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| CDS-3UTR TCA 90 bp | CAAGCATTCCAAAGAGATCTAAGCTCTGTCAGCATTTTCCTGACCCAGGAGACAGGAATGCTAAAGTACTaGATCCATGAGAGCTTAGGC | + |
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Preference number: 4 (lower is better) Translates to: QAFQRDLSSVSIFLTQETGMLKY*IHESLG Trigger: GCCTAAGCTCTCATGGATTCAGTACTTTAGCATTCC...TGTCTCCTGGGTCAGGAAAATGCTGACAGAGCTTAGATCTCTTTGGAATGCTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130644.2 |
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| CDS-3UTR CCA 90 bp | GCAGCCATAAGTCTCTGCATTCACACAGTTCACAGAAGAGGGATCCTCTCAGTGAGAGTTGATCCAGGATaGCTCTTGTTTCACTGTATA | + |
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Preference number: 4 (lower is better) Translates to: AAISLCIHTVHRRGILSVRVDPG*LLFHCI Trigger: TATACAGTGAAACAAGAGCCATCCTGGATCAACTCT...CACTGAGAGGATCCCTCTTCTGTGAACTGTGTGAATGCAGAGACTTATGGCTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031239.13 ENSMUST00000130644.2 |
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| CDS-3UTR CCA 90 bp | GCAGCCATAAGTCTCTGCATTCACACAGTTCACAGAAGAGGGATCCTCTCAGTGAGAAAATACAGTACTTaGCAAAAGCCTCCTGGGTAT | + |
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Preference number: 4 (lower is better) Translates to: AAISLCIHTVHRRGILSVRKYST*QKPPGY Trigger: ATACCCAGGAGGCTTTTGCCAAGTACTGTATTTTCT...CACTGAGAGGATCCCTCTTCTGTGAACTGTGTGAATGCAGAGACTTATGGCTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031239.13 ENSMUST00000130644.2 |
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| CDS-3UTR TCA 90 bp | GCAGCCATAAGTCTCTGCATTCACACAGTTCACAGAAGAGGGATCCTCTCAGTGCTGTTTCTTGGTAACTaGTGTTGTGAAAACTCAACA | + |
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Preference number: 4 (lower is better) Translates to: AAISLCIHTVHRRGILSVLFLGN*CCENST Trigger: TGTTGAGTTTTCACAACATCAGTTACCAAGAAACAG...CACTGAGAGGATCCCTCTTCTGTGAACTGTGTGAATGCAGAGACTTATGGCTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031239.13 ENSMUST00000130644.2 |
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| CDS-3UTR TCA 90 bp | GGATCCTCTCAGTGGCATTTGTCCACGAGTATAATTATTAATGTTCAGAGGATTGATCTGCTCCCATCCTaGGGTCCCATAATGGCATTG | + |
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Preference number: 4 (lower is better) Translates to: GSSQWHLSTSIIINVQRIDLLPS*GPIMAL Trigger: CAATGCCATTATGGGACCTCAGGATGGGAGCAGATC...AATCCTCTGAACATTAATAATTATACTCGTGGACAAATGCCACTGAGAGGATCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031239.13 ENSMUST00000130644.2 |
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| CDS-3UTR TCA 90 bp | ACAGTTCACAGAAGAGGGATCCTCTCAGTGGCATTTGTCCACGAGTATAATTATATAATCCACTTGAGCTaGTGGCAGAAAGGGGTGACA | + |
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Preference number: 4 (lower is better) Translates to: TVHRRGILSVAFVHEYNYIIHLS*WQKGVT Trigger: TGTCACCCCTTTCTGCCATCAGCTCAAGTGGATTAT...ATAATTATACTCGTGGACAAATGCCACTGAGAGGATCCCTCTTCTGTGAACTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031239.13 ENSMUST00000130644.2 |
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| CDS-3UTR GCA 90 bp | ACAGTTCACAGAAGAGGGATCCTCTCAGTGGCATTTGTCCACGAGTATAATTATATCCAGGAAGAAGTCTaGAGGGTTGTTGTGCGATTC | + |
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Preference number: 4 (lower is better) Translates to: TVHRRGILSVAFVHEYNYIQEEV*RVVVRF Trigger: GAATCGCACAACAACCCTGCAGACTTCTTCCTGGAT...ATAATTATACTCGTGGACAAATGCCACTGAGAGGATCCCTCTTCTGTGAACTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031239.13 ENSMUST00000130644.2 |
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| CDS-3UTR GCA 90 bp | ACAGTTCACAGAAGAGGGATCCTCTCAGTGGCATTTGTCCACGAGTATAATTATCACAAAGAGCTCCCCTaGAGACACACTTGTGATACA | + |
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Preference number: 4 (lower is better) Translates to: TVHRRGILSVAFVHEYNYHKELP*RHTCDT Trigger: TGTATCACAAGTGTGTCTGCAGGGGAGCTCTTTGTG...ATAATTATACTCGTGGACAAATGCCACTGAGAGGATCCCTCTTCTGTGAACTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031239.13 |
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| CDS-3UTR GCA 90 bp | CTAATAAACTTGGGGAGTTTACAGAGTCACACTATGATCCAACTCTGTAGACTTTGTTGGAACAGCCACTaGATTCTCCCCAGCTCCTAT | + |
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Preference number: 4 (lower is better) Translates to: LINLGSLQSHTMIQLCRLCWNSH*ILPSSY Trigger: ATAGGAGCTGGGGAGAATGCAGTGGCTGTTCCAACA...AAGTCTACAGAGTTGGATCATAGTGTGACTCTGTAAACTCCCCAAGTTTATTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000130644.2 |
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| CDS-3UTR CCA 90 bp | CAAGCATTCCAAAGAGATCTAAGCTCTGTCAGCATTTTCCTGACCCAGGAGACAAGAGTTGATCCAGGATaGCTCTTGTTTCACTGTATA | + |
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Preference number: 4 (lower is better) Translates to: QAFQRDLSSVSIFLTQETRVDPG*LLFHCI Trigger: TATACAGTGAAACAAGAGCCATCCTGGATCAACTCT...TGTCTCCTGGGTCAGGAAAATGCTGACAGAGCTTAGATCTCTTTGGAATGCTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130644.2 |
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| CDS-3UTR CCA 90 bp | AAACTAAAGCCAGGTGATTCTCCCAGAAGCCCCACGATGAGAGATCAATGCCCTAATCACAGTGACCCATaGAAAACCCTTGAAATTTTT | + |
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Preference number: 4 (lower is better) Translates to: KLKPGDSPRSPTMRDQCPNHSDP*KTLEIF Trigger: AAAAATTTCAAGGGTTTTCCATGGGTCACTGTGATT...AGGGCATTGATCTCTCATCGTGGGGCTTCTGGGAGAATCACCTGGCTTTAGTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000130644.2 |
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| CDS-3UTR TCA 90 bp | GGATCCTCTCAGTGGCATTTGTCCACGAGTATAATTATTAATGTTCAGAGGATTTGTTCTCCCAAGAGTTaGTCCAGGATGGCTCTTGTT | + |
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Preference number: 4 (lower is better) Translates to: GSSQWHLSTSIIINVQRICSPKS*SRMALV Trigger: AACAAGAGCCATCCTGGATCAACTCTTGGGAGAACA...AATCCTCTGAACATTAATAATTATACTCGTGGACAAATGCCACTGAGAGGATCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031239.13 ENSMUST00000130644.2 |
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| CDS-3UTR TCA 90 bp | CATGTTTCAAGTATTGTTGTTACTCCCAAAGCAGAAAACTCCAGCTTCCTAATGATAATCCACTTGAGCTaGTGGCAGAAAGGGGTGACA | + |
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Preference number: 4 (lower is better) Translates to: HVSSIVVTPKAENSSFLMIIHLS*WQKGVT Trigger: TGTCACCCCTTTCTGCCATCAGCTCAAGTGGATTAT...CATTAGGAAGCTGGAGTTTTCTGCTTTGGGAGTAACAACAATACTTGAAACATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000130644.2 |
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| CDS-3UTR TCA 90 bp | CTAATAAACTTGGGGAGTTTACAGAGTCACACTATGATCCAACTCTGTAGACTTACTGTGATAATGGCCTaGATCACAGTGACCCATGGA | + |
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Preference number: 4 (lower is better) Translates to: LINLGSLQSHTMIQLCRLTVIMA*ITVTHG Trigger: TCCATGGGTCACTGTGATTCAGGCCATTATCACAGT...AAGTCTACAGAGTTGGATCATAGTGTGACTCTGTAAACTCCCCAAGTTTATTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130644.2 |
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| CDS-3UTR GCA 90 bp | GACATACTCCTCTTTACAAGTGTCTTTCTCACCTTCACAACTTTGGTATTATCATGTTGGAACAGCCACTaGATTCTCCCCAGCTCCTAT | + |
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Preference number: 4 (lower is better) Translates to: DILLFTSVFLTFTTLVLSCWNSH*ILPSSY Trigger: ATAGGAGCTGGGGAGAATGCAGTGGCTGTTCCAACA...TGATAATACCAAAGTTGTGAAGGTGAGAAAGACACTTGTAAAGAGGAGTATGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031239.13 |
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| CDS-3UTR CCA 90 bp | ACAGTTCACAGAAGAGGGATCCTCTCAGTGGCATTTGTCCACGAGTATAATTATATGTCTTCAGGTCACTaGTGTTTGTTTCAGGAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: TVHRRGILSVAFVHEYNYMSSGH*CLFQEG Trigger: ACCTTCCTGAAACAAACACCAGTGACCTGAAGACAT...ATAATTATACTCGTGGACAAATGCCACTGAGAGGATCCCTCTTCTGTGAACTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031239.13 ENSMUST00000130644.2 |
||
| CDS-3UTR CCA 90 bp | CCCAAAGCAGAAAACTCCAGCTTCCTAATGACACAAGCATTCCAAAGAGATCTATATTTGTCATCTTCATaGCCGTCTTCCTCTGTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: PKAENSSFLMTQAFQRDLYLSSS*PSSSVS Trigger: AGACACAGAGGAAGACGGCCATGAAGATGACAAATA...TAGATCTCTTTGGAATGCTTGTGTCATTAGGAAGCTGGAGTTTTCTGCTTTGGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130644.2 |
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| 3UTR CAA 72 bp | ACTGCATTTCCATTCCTTCTTTTCATCATCTGGCTCTaGCACTCTTTCTCCCATATTCCACAATGCTCTAAG | + |
|
Preference number: 4 (lower is better) Translates to: TAFPFLLFIIWL*HSFSHIPQCSK Trigger: CTTAGAGCATTGTGGAATATGGGAGAAAGAGTGCAAGAGCCAGATGATGAAAAGAAGGAATGGAAATGCAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031239.13 |
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| 3UTR CAA 72 bp | CCACTTAAAAGCATACAGGATGAAGGCCTAATAAACTaGGGGAGTTTACAGAGTCACACTATGATCCAACTC | + |
|
Preference number: 4 (lower is better) Translates to: PLKSIQDEGLIN*GSLQSHTMIQL Trigger: GAGTTGGATCATAGTGTGACTCTGTAAACTCCCCAAGTTTATTAGGCCTTCATCCTGTATGCTTTTAAGTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000130644.2 |
||
| CDS-3UTR TCA 90 bp | GATTCCTGTAGGCTCAAATGTGAGTGTAAATGTGAATCAATGACTGCCTCTCTCAGTTTTCCTGTGACTTaGTACTGTCTCTCAAAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: DSCRLKCECKCESMTASLSFPVT*YCLSKS Trigger: GCTTTTTGAGAGACAGTATCAAGTCACAGGAAAACT...GAGAGAGGCAGTCATTGATTCACATTTACACTCACATTTGAGCCTACAGGAATC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031239.13 |
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| CDS-3UTR TCA 90 bp | ACAGTTCACAGAAGAGGGATCCTCTCAGTGGCATTTGTCCACGAGTATAATTATAGTTTTCCTGTGACTTaGTACTGTCTCTCAAAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: TVHRRGILSVAFVHEYNYSFPVT*YCLSKS Trigger: GCTTTTTGAGAGACAGTATCAAGTCACAGGAAAACT...ATAATTATACTCGTGGACAAATGCCACTGAGAGGATCCCTCTTCTGTGAACTGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031239.13 ENSMUST00000130644.2 |
||
| CDS-3UTR GCA 90 bp | TCATTCCTTTCTGAATCTATAATGCTGCTCTCTTCAACAGGCAAAAGCATGTTTCTCTCACGGTCACTGTaGCCAACACCACATCATTTT | + |
|
Preference number: 4 (lower is better) Translates to: SFLSESIMLLSSTGKSMFLSRSL*PTPHHF Trigger: AAAATGATGTGGTGTTGGGCACAGTGACCGTGAGAG...AAACATGCTTTTGCCTGTTGAAGAGAGCAGCATTATAGATTCAGAAAGGAATGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130644.2 |
||
| CDS-3UTR CCA 90 bp | ACCACAATACTGCATTTCCATTCCTTCTTTTCATCATCTGGCTCTTGCACTCTTTGCCTTTTTACGAAGTaGAAAGCCACTCTGTACTGT | + |
|
Preference number: 4 (lower is better) Translates to: TTILHFHSFFSSSGSCTLCLFTK*KATLYC Trigger: ACAGTACAGAGTGGCTTTCCACTTCGTAAAAAGGCA...AAGAGTGCAAGAGCCAGATGATGAAAAGAAGGAATGGAAATGCAGTATTGTGGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031239.13 |
||
| CDS-3UTR CCA 90 bp | GATTCCTGTAGGCTCAAATGTGAGTGTAAATGTGAATCAATGACTGCCTCTCTCTTCTGTGTTGTGTTCTaGACAAAAGTTTTGTCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: DSCRLKCECKCESMTASLFCVVF*TKVLSQ Trigger: CTGGGACAAAACTTTTGTCCAGAACACAACACAGAA...GAGAGAGGCAGTCATTGATTCACATTTACACTCACATTTGAGCCTACAGGAATC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031239.13 |
||
| CDS-3UTR CCA 90 bp | CCCAAAGCAGAAAACTCCAGCTTCCTAATGACACAAGCATTCCAAAGAGATCTATTCTGTGTTGTGTTCTaGACAAAAGTTTTGTCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: PKAENSSFLMTQAFQRDLFCVVF*TKVLSQ Trigger: CTGGGACAAAACTTTTGTCCAGAACACAACACAGAA...TAGATCTCTTTGGAATGCTTGTGTCATTAGGAAGCTGGAGTTTTCTGCTTTGGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000130644.2 |
||
| CDS-3UTR TCA 90 bp | GACATACTCCTCTTTACAAGTGTCTTTCTCACCTTCACAACTTTGGTATTATCAGGAATGCTAAAGTACTaGATCCATGAGAGCTTAGGC | + |
|
Preference number: 4 (lower is better) Translates to: DILLFTSVFLTFTTLVLSGMLKY*IHESLG Trigger: GCCTAAGCTCTCATGGATTCAGTACTTTAGCATTCC...TGATAATACCAAAGTTGTGAAGGTGAGAAAGACACTTGTAAAGAGGAGTATGTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031239.13 |
||
| CDS-3UTR GCA 90 bp | GATTCCTGTAGGCTCAAATGTGAGTGTAAATGTGAATCAATGACTGCCTCTCTCTGTTCTTTATTCAGATaGAGAAGTTCAAGCACCTCA | + |
|
Preference number: 4 (lower is better) Translates to: DSCRLKCECKCESMTASLCSLFR*RSSSTS Trigger: TGAGGTGCTTGAACTTCTGCATCTGAATAAAGAACA...GAGAGAGGCAGTCATTGATTCACATTTACACTCACATTTGAGCCTACAGGAATC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031239.13 |
||
| CDS-3UTR CCA 90 bp | GGATCCTCTCAGTGGCATTTGTCCACGAGTATAATTATTAATGTTCAGAGGATTTGCCTTTTTACGAAGTaGAAAGCCACTCTGTACTGT | + |
|
Preference number: 4 (lower is better) Translates to: GSSQWHLSTSIIINVQRICLFTK*KATLYC Trigger: ACAGTACAGAGTGGCTTTCCACTTCGTAAAAAGGCA...AATCCTCTGAACATTAATAATTATACTCGTGGACAAATGCCACTGAGAGGATCC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031239.13 ENSMUST00000130644.2 |
||
| CDS-3UTR CCA 90 bp | GATTCCTGTAGGCTCAAATGTGAGTGTAAATGTGAATCAATGACTGCCTCTCTCAATCTAAGCCAGTTGTaGGATCATCCAAGAACAAAA | + |
|
Preference number: 4 (lower is better) Translates to: DSCRLKCECKCESMTASLNLSQL*DHPRTK Trigger: TTTTGTTCTTGGATGATCCCACAACTGGCTTAGATT...GAGAGAGGCAGTCATTGATTCACATTTACACTCACATTTGAGCCTACAGGAATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031239.13 |
||
| CDS-3UTR TCA 90 bp | GACATACTCCTCTTTACAAGTGTCTTTCTCACCTTCACAACTTTGGTATTATCATCCTGTGCAGGTCCATaGAACATAACTTTTCCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: DILLFTSVFLTFTTLVLSSCAGP*NITFPE Trigger: TTCAGGAAAAGTTATGTTTCATGGACCTGCACAGGA...TGATAATACCAAAGTTGTGAAGGTGAGAAAGACACTTGTAAAGAGGAGTATGTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031239.13 |
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| CDS-3UTR TCA 90 bp | CTAATAAACTTGGGGAGTTTACAGAGTCACACTATGATCCAACTCTGTAGACTTAGTTATGGCATCTACTaGCTTCTTCTGTGTTGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: LINLGSLQSHTMIQLCRLSYGIY*LLLCCV Trigger: AACACAACACAGAAGAAGTCAGTAGATGCCATAACT...AAGTCTACAGAGTTGGATCATAGTGTGACTCTGTAAACTCCCCAAGTTTATTAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130644.2 |
||
| CDS-3UTR GCA 90 bp | GGATCCTCTCAGTGGCATTTGTCCACGAGTATAATTATTAATGTTCAGAGGATTACGATGAGAGATCAATaGCCTGGATCATCAAGAATT | + |
|
Preference number: 4 (lower is better) Translates to: GSSQWHLSTSIIINVQRITMRDQ*PGSSRI Trigger: AATTCTTGATGATCCAGGGCATTGATCTCTCATCGT...AATCCTCTGAACATTAATAATTATACTCGTGGACAAATGCCACTGAGAGGATCC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031239.13 |
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| CDS-3UTR CCA 90 bp | TCATTCCTTTCTGAATCTATAATGCTGCTCTCTTCAACAGGCAAAAGCATGTTTATGTCTTCAGGTCACTaGTGTTTGTTTCAGGAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: SFLSESIMLLSSTGKSMFMSSGH*CLFQEG Trigger: ACCTTCCTGAAACAAACACCAGTGACCTGAAGACAT...AAACATGCTTTTGCCTGTTGAAGAGAGCAGCATTATAGATTCAGAAAGGAATGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130644.2 |
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| CDS-3UTR CCA 90 bp | GACATACTCCTCTTTACAAGTGTCTTTCTCACCTTCACAACTTTGGTATTATCATATTTGTCATCTTCATaGCCGTCTTCCTCTGTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: DILLFTSVFLTFTTLVLSYLSSS*PSSSVS Trigger: AGACACAGAGGAAGACGGCCATGAAGATGACAAATA...TGATAATACCAAAGTTGTGAAGGTGAGAAAGACACTTGTAAAGAGGAGTATGTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031239.13 |
||
| CDS-3UTR CCA 90 bp | ACAGTTCACAGAAGAGGGATCCTCTCAGTGGCATTTGTCCACGAGTATAATTATAATCACAGTGACCCATaGAAAACCCTTGAAATTTTT | + |
|
Preference number: 4 (lower is better) Translates to: TVHRRGILSVAFVHEYNYNHSDP*KTLEIF Trigger: AAAAATTTCAAGGGTTTTCCATGGGTCACTGTGATT...ATAATTATACTCGTGGACAAATGCCACTGAGAGGATCCCTCTTCTGTGAACTGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031239.13 ENSMUST00000130644.2 |
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| CDS-3UTR CCA 90 bp | GGATCCTCTCAGTGGCATTTGTCCACGAGTATAATTATTAATGTTCAGAGGATTAGAAAATACAGTACTTaGCAAAAGCCTCCTGGGTAT | + |
|
Preference number: 4 (lower is better) Translates to: GSSQWHLSTSIIINVQRIRKYST*QKPPGY Trigger: ATACCCAGGAGGCTTTTGCCAAGTACTGTATTTTCT...AATCCTCTGAACATTAATAATTATACTCGTGGACAAATGCCACTGAGAGGATCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031239.13 ENSMUST00000130644.2 |
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| CDS-3UTR TCA 90 bp | CATGTTTCAAGTATTGTTGTTACTCCCAAAGCAGAAAACTCCAGCTTCCTAATGCTGTTTCTTGGTAACTaGTGTTGTGAAAACTCAACA | + |
|
Preference number: 4 (lower is better) Translates to: HVSSIVVTPKAENSSFLMLFLGN*CCENST Trigger: TGTTGAGTTTTCACAACATCAGTTACCAAGAAACAG...CATTAGGAAGCTGGAGTTTTCTGCTTTGGGAGTAACAACAATACTTGAAACATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000130644.2 |
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| CDS-3UTR GCA 90 bp | CATGTTTCAAGTATTGTTGTTACTCCCAAAGCAGAAAACTCCAGCTTCCTAATGTGTTCTTTATTCAGATaGAGAAGTTCAAGCACCTCA | + |
|
Preference number: 4 (lower is better) Translates to: HVSSIVVTPKAENSSFLMCSLFR*RSSSTS Trigger: TGAGGTGCTTGAACTTCTGCATCTGAATAAAGAACA...CATTAGGAAGCTGGAGTTTTCTGCTTTGGGAGTAACAACAATACTTGAAACATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130644.2 |
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| CDS-3UTR CCA 90 bp | ATCTATAATGCTGCTCTCTTCAACAGGCAAAAGCATGTTTCAAGTATTGTTGTTTGCTCATGTCTCATCTaGACTTCAATACAATCATTT | + |
|
Preference number: 4 (lower is better) Translates to: IYNAALFNRQKHVSSIVVCSCLI*TSIQSF Trigger: AAATGATTGTATTGAAGTCCAGATGAGACATGAGCA...AACAACAATACTTGAAACATGCTTTTGCCTGTTGAAGAGAGCAGCATTATAGAT 34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130644.2 |
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| CDS CCA 90 bp | CAGTGTTGGAACAGCCACTGCATTCTCCCCAGCTCCTATGGACAATaGCAGGGAACTGGCAGAATAGGCCAGCACCATGATGGTACATAT | + |
|
Preference number: 5 (lower is better) Translates to: QCWNSHCILPSSYGQ*QGTGRIGQHHDGTY Trigger: ATATGTACCATCATGGTGCTGGCCTATTCTGCCAGTTCCCTGCCATTGTCCATAGGAGCTGGGGAGAATGCAGTGGCTGTTCCAACACTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031239.13 ENSMUST00000130644.2 |
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| CDS CCA 90 bp | CTGAGCTCCTCTCCAGCTTCTGTTCTCCCAAGAGTTGATCCAGGATaGCTCTTGTTTCACTGTATAATGGGGACTGGGCATACATATTGG | + |
|
Preference number: 5 (lower is better) Translates to: LSSSPASVLPRVDPG*LLFHCIMGTGHTYW Trigger: CCAATATGTATGCCCAGTCCCCATTATACAGTGAAACAAGAGCCATCCTGGATCAACTCTTGGGAGAACAGAAGCTGGAGAGGAGCTCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031239.13 ENSMUST00000130644.2 |
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| CDS-3UTR CAA 90 bp | GCAGCCATAAGTCTCTGCATTCACACAGTTCACAGAAGAGGGATCCTCTCAGTGGACTGGGCATACATATaGGCCAGTTTTCCTGTGACT | + |
|
Preference number: 5 (lower is better) Translates to: AAISLCIHTVHRRGILSVDWAYI*ASFPVT Trigger: AGTCACAGGAAAACTGGCCAATATGTATGCCCAGTC...CACTGAGAGGATCCCTCTTCTGTGAACTGTGTGAATGCAGAGACTTATGGCTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031239.13 ENSMUST00000130644.2 |
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| CDS-3UTR CAA 90 bp | TCTCTGCATTCACACAGTTCACAGAAGAGGGATCCTCTCAGTGGCATTTGTCCAGACTGGGCATACATATaGGCCAGTTTTCCTGTGACT | + |
|
Preference number: 5 (lower is better) Translates to: SLHSHSSQKRDPLSGICPDWAYI*ASFPVT Trigger: AGTCACAGGAAAACTGGCCAATATGTATGCCCAGTC...TGGACAAATGCCACTGAGAGGATCCCTCTTCTGTGAACTGTGTGAATGCAGAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031239.13 ENSMUST00000130644.2 |
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| CDS-3UTR CAA 90 bp | TCTCTGCATTCACACAGTTCACAGAAGAGGGATCCTCTCAGTGGCATTTGTCCAGATCCAGGATGGCTCTaGTTTCACTGTATAATGGGG | + |
|
Preference number: 5 (lower is better) Translates to: SLHSHSSQKRDPLSGICPDPGWL*FHCIMG Trigger: CCCCATTATACAGTGAAACAAGAGCCATCCTGGATC...TGGACAAATGCCACTGAGAGGATCCCTCTTCTGTGAACTGTGTGAATGCAGAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031239.13 ENSMUST00000130644.2 |
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| CDS GCA 90 bp | GGGATCATCCAAGAACAAAATGGGATGCTCAGTGACCAGCTCCATTaGTATACTGGTCCTTTTCCTGAGTTCTTTGGATCTAGGCTTGAT | + |
|
Preference number: 5 (lower is better) Translates to: GIIQEQNGMLSDQLH*YTGPFPEFFGSRLD Trigger: ATCAAGCCTAGATCCAAAGAACTCAGGAAAAGGACCAGTATAGCAATGGAGCTGGTCACTGAGCATCCCATTTTGTTCTTGGATGATCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031239.13 ENSMUST00000130644.2 |
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| CDS GCA 90 bp | CAGGAAGAAGTCTGCAGGGTTGTTGTGCGATTCATAATTGTAACCTaGAGATCTGAAGTACTCCAAAGCATCCTGTGCAGGTCCATGAAA | + |
|
Preference number: 5 (lower is better) Translates to: QEEVCRVVVRFIIVT*RSEVLQSILCRSMK Trigger: TTTCATGGACCTGCACAGGATGCTTTGGAGTACTTCAGATCTGCAGGTTACAATTATGAATCGCACAACAACCCTGCAGACTTCTTCCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031239.13 ENSMUST00000130644.2 |
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| CDS-3UTR CAA 90 bp | CCCCCAGGGTTTAAACAGGGCTGTCTGTGTGATGAAGGGTTTCAGACTTTCCACCTTTTCCTGAGTTCTTaGGATCTAGGCTTGATATTT | + |
|
Preference number: 5 (lower is better) Translates to: PPGFKQGCLCDEGFQTFHLFLSS*DLGLIF Trigger: AAATATCAAGCCTAGATCCAAAGAACTCAGGAAAAG...GTGGAAAGTCTGAAACCCTTCATCACACAGACAGCCCTGTTTAAACCCTGGGGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031239.13 |
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| CDS-3UTR CAA 90 bp | ACAGTTCACAGAAGAGGGATCCTCTCAGTGGCATTTGTCCACGAGTATAATTATTGGTCACAAGCAGTGTaGGAACAGCCACTGCATTCT | + |
|
Preference number: 5 (lower is better) Translates to: TVHRRGILSVAFVHEYNYWSQAV*EQPLHS Trigger: AGAATGCAGTGGCTGTTCCAACACTGCTTGTGACCA...ATAATTATACTCGTGGACAAATGCCACTGAGAGGATCCCTCTTCTGTGAACTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031239.13 ENSMUST00000130644.2 |
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| CDS-3UTR CAA 90 bp | CTCCAGCTTCCTAATGACACAAGCATTCCAAAGAGATCTAAGCTCTGTCAGCATTCAGGTCACTGGTGTTaGTTTCAGGAAGGTCACAAA | + |
|
Preference number: 5 (lower is better) Translates to: LQLPNDTSIPKRSKLCQHSGHWC*FQEGHK Trigger: TTTGTGACCTTCCTGAAACAAACACCAGTGACCTGA...ATGCTGACAGAGCTTAGATCTCTTTGGAATGCTTGTGTCATTAGGAAGCTGGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130644.2 |
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| CDS-3UTR CAA 90 bp | CAAGCATTCCAAAGAGATCTAAGCTCTGTCAGCATTTTCCTGACCCAGGAGACAAAAAGCTCTTCATATTaGTCATCTTCATGGCCGTCT | + |
|
Preference number: 5 (lower is better) Translates to: QAFQRDLSSVSIFLTQETKSSSY*SSSWPS Trigger: AGACGGCCATGAAGATGACAAATATGAAGAGCTTTT...TGTCTCCTGGGTCAGGAAAATGCTGACAGAGCTTAGATCTCTTTGGAATGCTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000130644.2 |
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| CDS-3UTR CAA 90 bp | CTAATAAACTTGGGGAGTTTACAGAGTCACACTATGATCCAACTCTGTAGACTTTGGTCACAAGCAGTGTaGGAACAGCCACTGCATTCT | + |
|
Preference number: 5 (lower is better) Translates to: LINLGSLQSHTMIQLCRLWSQAV*EQPLHS Trigger: AGAATGCAGTGGCTGTTCCAACACTGCTTGTGACCA...AAGTCTACAGAGTTGGATCATAGTGTGACTCTGTAAACTCCCCAAGTTTATTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130644.2 |
||
| CDS-3UTR CAA 90 bp | GACATACTCCTCTTTACAAGTGTCTTTCTCACCTTCACAACTTTGGTATTATCACACGCGGATCTCTCCTaGCAGCTAAGACATCTAACA | + |
|
Preference number: 5 (lower is better) Translates to: DILLFTSVFLTFTTLVLSHADLS*QLRHLT Trigger: TGTTAGATGTCTTAGCTGCAAGGAGAGATCCGCGTG...TGATAATACCAAAGTTGTGAAGGTGAGAAAGACACTTGTAAAGAGGAGTATGTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031239.13 |
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| CDS-3UTR CAA 90 bp | CTTTCTGAATCTATAATGCTGCTCTCTTCAACAGGCAAAAGCATGTTTCAAGTACACGCGGATCTCTCCTaGCAGCTAAGACATCTAACA | + |
|
Preference number: 5 (lower is better) Translates to: LSESIMLLSSTGKSMFQVHADLS*QLRHLT Trigger: TGTTAGATGTCTTAGCTGCAAGGAGAGATCCGCGTG...TACTTGAAACATGCTTTTGCCTGTTGAAGAGAGCAGCATTATAGATTCAGAAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130644.2 |
||
| CDS-3UTR CAA 90 bp | CAAGCATTCCAAAGAGATCTAAGCTCTGTCAGCATTTTCCTGACCCAGGAGACACTTTTCCTGAGTTCTTaGGATCTAGGCTTGATATTT | + |
|
Preference number: 5 (lower is better) Translates to: QAFQRDLSSVSIFLTQETLFLSS*DLGLIF Trigger: AAATATCAAGCCTAGATCCAAAGAACTCAGGAAAAG...TGTCTCCTGGGTCAGGAAAATGCTGACAGAGCTTAGATCTCTTTGGAATGCTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000130644.2 |
||
| CDS-3UTR CAA 90 bp | ACAGTTCACAGAAGAGGGATCCTCTCAGTGGCATTTGTCCACGAGTATAATTATAAAAGCTCTTCATATTaGTCATCTTCATGGCCGTCT | + |
|
Preference number: 5 (lower is better) Translates to: TVHRRGILSVAFVHEYNYKSSSY*SSSWPS Trigger: AGACGGCCATGAAGATGACAAATATGAAGAGCTTTT...ATAATTATACTCGTGGACAAATGCCACTGAGAGGATCCCTCTTCTGTGAACTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031239.13 ENSMUST00000130644.2 |
||
| CDS-3UTR CAA 90 bp | GACATACTCCTCTTTACAAGTGTCTTTCTCACCTTCACAACTTTGGTATTATCAGATCCAGGATGGCTCTaGTTTCACTGTATAATGGGG | + |
|
Preference number: 5 (lower is better) Translates to: DILLFTSVFLTFTTLVLSDPGWL*FHCIMG Trigger: CCCCATTATACAGTGAAACAAGAGCCATCCTGGATC...TGATAATACCAAAGTTGTGAAGGTGAGAAAGACACTTGTAAAGAGGAGTATGTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031239.13 |
||
| CDS-3UTR CAA 90 bp | GACATACTCCTCTTTACAAGTGTCTTTCTCACCTTCACAACTTTGGTATTATCATCAGGTCACTGGTGTTaGTTTCAGGAAGGTCACAAA | + |
|
Preference number: 5 (lower is better) Translates to: DILLFTSVFLTFTTLVLSSGHWC*FQEGHK Trigger: TTTGTGACCTTCCTGAAACAAACACCAGTGACCTGA...TGATAATACCAAAGTTGTGAAGGTGAGAAAGACACTTGTAAAGAGGAGTATGTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031239.13 |
||
| CDS-3UTR CAA 90 bp | GATTCCTGTAGGCTCAAATGTGAGTGTAAATGTGAATCAATGACTGCCTCTCTCTTAGCAGGTCGAGGTTaGCCATTTATCAAAATATCT | + |
|
Preference number: 5 (lower is better) Translates to: DSCRLKCECKCESMTASLLAGRG*PFIKIS Trigger: AGATATTTTGATAAATGGCAAACCTCGACCTGCTAA...GAGAGAGGCAGTCATTGATTCACATTTACACTCACATTTGAGCCTACAGGAATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031239.13 |
||
| CDS-3UTR CAA 90 bp | ACCACAATACTGCATTTCCATTCCTTCTTTTCATCATCTGGCTCTTGCACTCTTCTGACTTCTTCTGTGTaGTGTTCTGGACAAAAGTTT | + |
|
Preference number: 5 (lower is better) Translates to: TTILHFHSFFSSSGSCTLLTSSV*CSGQKF Trigger: AAACTTTTGTCCAGAACACAACACAGAAGAAGTCAG...AAGAGTGCAAGAGCCAGATGATGAAAAGAAGGAATGGAAATGCAGTATTGTGGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031239.13 |
||
| CDS-3UTR CAA 90 bp | CATGTTTCAAGTATTGTTGTTACTCCCAAAGCAGAAAACTCCAGCTTCCTAATGCTGACTTCTTCTGTGTaGTGTTCTGGACAAAAGTTT | + |
|
Preference number: 5 (lower is better) Translates to: HVSSIVVTPKAENSSFLMLTSSV*CSGQKF Trigger: AAACTTTTGTCCAGAACACAACACAGAAGAAGTCAG...CATTAGGAAGCTGGAGTTTTCTGCTTTGGGAGTAACAACAATACTTGAAACATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000130644.2 |
||
| CDS GCA 90 bp | CTGAGTTCTTTGGATCTAGGCTTGATATTTTGTTCTTTATTCAGATaGAGAAGTTCAAGCACCTCATTAATCCTCCTTCTCTTTTCATCT | + |
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Preference number: 5 (lower is better) Translates to: LSSLDLGLIFCSLFR*RSSSTSLILLLFSS Trigger: AGATGAAAAGAGAAGGAGGATTAATGAGGTGCTTGAACTTCTGCATCTGAATAAAGAACAAAATATCAAGCCTAGATCCAAAGAACTCAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031239.13 ENSMUST00000130644.2 |
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| CDS CCA 72 bp | GTGTTGGAACAGCCACTGCATTCTCCCCAGCTCCTATaGACAATGGCAGGGAACTGGCAGAATAGGCCAGCA | + |
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Preference number: 6 (lower is better) Translates to: VLEQPLHSPQLL*TMAGNWQNRPA Trigger: TGCTGGCCTATTCTGCCAGTTCCCTGCCATTGTCCATAGGAGCTGGGGAGAATGCAGTGGCTGTTCCAACAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031239.13 ENSMUST00000130644.2 |
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| CDS CCA 72 bp | AACAGCCACTGCATTCTCCCCAGCTCCTATGGACAATaGCAGGGAACTGGCAGAATAGGCCAGCACCATGAT | + |
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Preference number: 6 (lower is better) Translates to: NSHCILPSSYGQ*QGTGRIGQHHD Trigger: ATCATGGTGCTGGCCTATTCTGCCAGTTCCCTGCCATTGTCCATAGGAGCTGGGGAGAATGCAGTGGCTGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031239.13 ENSMUST00000130644.2 |
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| CDS GCA 72 bp | AAAGTAGATGGTCACAAGCAGTGTTGGAACAGCCACTaGATTCTCCCCAGCTCCTATGGACAATGGCAGGGA | + |
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Preference number: 6 (lower is better) Translates to: KVDGHKQCWNSH*ILPSSYGQWQG Trigger: TCCCTGCCATTGTCCATAGGAGCTGGGGAGAATGCAGTGGCTGTTCCAACACTGCTTGTGACCATCTACTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031239.13 ENSMUST00000130644.2 |
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| CDS TCA 72 bp | GCTGAGCTCCTCTCCAGCTTCTGTTCTCCCAAGAGTTaGTCCAGGATGGCTCTTGTTTCACTGTATAATGGG | + |
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Preference number: 6 (lower is better) Translates to: AELLSSFCSPKS*SRMALVSLYNG Trigger: CCCATTATACAGTGAAACAAGAGCCATCCTGGATCAACTCTTGGGAGAACAGAAGCTGGAGAGGAGCTCAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031239.13 ENSMUST00000130644.2 |
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| CDS CCA 72 bp | CAGCATGAACACAAAGTAGATGGTCACAAGCAGTGTTaGAACAGCCACTGCATTCTCCCCAGCTCCTATGGA | + |
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Preference number: 6 (lower is better) Translates to: QHEHKVDGHKQC*NSHCILPSSYG Trigger: TCCATAGGAGCTGGGGAGAATGCAGTGGCTGTTCCAACACTGCTTGTGACCATCTACTTTGTGTTCATGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031239.13 ENSMUST00000130644.2 |
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| CDS CCA 72 bp | TCTCCAGCTTCTGTTCTCCCAAGAGTTGATCCAGGATaGCTCTTGTTTCACTGTATAATGGGGACTGGGCAT | + |
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Preference number: 6 (lower is better) Translates to: SPASVLPRVDPG*LLFHCIMGTGH Trigger: ATGCCCAGTCCCCATTATACAGTGAAACAAGAGCCATCCTGGATCAACTCTTGGGAGAACAGAAGCTGGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031239.13 ENSMUST00000130644.2 |
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| CDS GCA 72 bp | GGTGATTCTCCCAGAAGCCCCACGATGAGAGATCAATaGCCTGGATCATCAAGAATTCTTCACCAGTACATA | + |
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Preference number: 6 (lower is better) Translates to: GDSPRSPTMRDQ*PGSSRILHQYI Trigger: TATGTACTGGTGAAGAATTCTTGATGATCCAGGGCATTGATCTCTCATCGTGGGGCTTCTGGGAGAATCACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031239.13 |
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| CDS TCA 72 bp | GATCTGAAGTACTCCAAAGCATCCTGTGCAGGTCCATaGAACATAACTTTTCCTGAAGCCACTAAGGTGAGG | + |
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Preference number: 6 (lower is better) Translates to: DLKYSKASCAGP*NITFPEATKVR Trigger: CCTCACCTTAGTGGCTTCAGGAAAAGTTATGTTTCATGGACCTGCACAGGATGCTTTGGAGTACTTCAGATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031239.13 ENSMUST00000130644.2 |
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| CDS CAA 72 bp | GCTTCTGTTCTCCCAAGAGTTGATCCAGGATGGCTCTaGTTTCACTGTATAATGGGGACTGGGCATACATAT | + |
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Preference number: 6 (lower is better) Translates to: ASVLPRVDPGWL*FHCIMGTGHTY Trigger: ATATGTATGCCCAGTCCCCATTATACAGTGAAACAAGAGCCATCCTGGATCAACTCTTGGGAGAACAGAAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031239.13 ENSMUST00000130644.2 |
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| CDS TCA 72 bp | CCTACGGCTGTAGCCAATATGACTGTGATAATGGCCTaGATCACAGTGACCCATGGAAAACCCTTGAAATTT | + |
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Preference number: 6 (lower is better) Translates to: PTAVANMTVIMA*ITVTHGKPLKF Trigger: AAATTTCAAGGGTTTTCCATGGGTCACTGTGATTCAGGCCATTATCACAGTCATATTGGCTACAGCCGTAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031239.13 ENSMUST00000130644.2 |
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| CDS GCA 72 bp | CAAGAACAAAATGGGATGCTCAGTGACCAGCTCCATTaGTATACTGGTCCTTTTCCTGAGTTCTTTGGATCT | + |
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Preference number: 6 (lower is better) Translates to: QEQNGMLSDQLH*YTGPFPEFFGS Trigger: AGATCCAAAGAACTCAGGAAAAGGACCAGTATAGCAATGGAGCTGGTCACTGAGCATCCCATTTTGTTCTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031239.13 ENSMUST00000130644.2 |
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| CDS CAA 90 bp | ATGGCATCTACTGACTTCTTCTGTGTTGTGTTCTGGACAAAAGTTTaGTCCCAGGAATTCATTATGCAGCAGAGCCCTAAATCCATAATG | + |
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Preference number: 6 (lower is better) Translates to: MASTDFFCVVFWTKV*SQEFIMQQSPKSIM Trigger: CATTATGGATTTAGGGCTCTGCTGCATAATGAATTCCTGGGACAAAACTTTTGTCCAGAACACAACACAGAAGAAGTCAGTAGATGCCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031239.13 ENSMUST00000130644.2 |
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| CDS CAA 90 bp | TCAGTGACCAGCTCCATTGCTATACTGGTCCTTTTCCTGAGTTCTTaGGATCTAGGCTTGATATTTTGTTCTTTATTCAGATGCAGAAGT | + |
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Preference number: 6 (lower is better) Translates to: SVTSSIAILVLFLSS*DLGLIFCSLFRCRS Trigger: ACTTCTGCATCTGAATAAAGAACAAAATATCAAGCCTAGATCCAAAGAACTCAGGAAAAGGACCAGTATAGCAATGGAGCTGGTCACTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031239.13 ENSMUST00000130644.2 |
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| CDS TCA 72 bp | CACAGTGACCCATGGAAAACCCTTGAAATTTTTGAATaGTTGACAGATAATCCACTTGAGCTGATGGCAGAA | + |
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Preference number: 6 (lower is better) Translates to: HSDPWKTLEIFE*LTDNPLELMAE Trigger: TTCTGCCATCAGCTCAAGTGGATTATCTGTCAATCATTCAAAAATTTCAAGGGTTTTCCATGGGTCACTGTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031239.13 ENSMUST00000130644.2 |
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| CDS CAA 90 bp | TCCATTGCTATACTGGTCCTTTTCCTGAGTTCTTTGGATCTAGGCTaGATATTTTGTTCTTTATTCAGATGCAGAAGTTCAAGCACCTCA | + |
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Preference number: 6 (lower is better) Translates to: SIAILVLFLSSLDLG*IFCSLFRCRSSSTS Trigger: TGAGGTGCTTGAACTTCTGCATCTGAATAAAGAACAAAATATCAAGCCTAGATCCAAAGAACTCAGGAAAAGGACCAGTATAGCAATGGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031239.13 ENSMUST00000130644.2 |
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| CDS CAA 72 bp | CCTTTTCCTGAGTTCTTTGGATCTAGGCTTGATATTTaGTTCTTTATTCAGATGCAGAAGTTCAAGCACCTC | + |
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Preference number: 6 (lower is better) Translates to: PFPEFFGSRLDI*FFIQMQKFKHL Trigger: GAGGTGCTTGAACTTCTGCATCTGAATAAAGAACAAAATATCAAGCCTAGATCCAAAGAACTCAGGAAAAGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031239.13 ENSMUST00000130644.2 |
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| CDS CAA 72 bp | ATACTGGTCCTTTTCCTGAGTTCTTTGGATCTAGGCTaGATATTTTGTTCTTTATTCAGATGCAGAAGTTCA | + |
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Preference number: 6 (lower is better) Translates to: ILVLFLSSLDLG*IFCSLFRCRSS Trigger: TGAACTTCTGCATCTGAATAAAGAACAAAATATCAAGCCTAGATCCAAAGAACTCAGGAAAAGGACCAGTAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031239.13 ENSMUST00000130644.2 |
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