Pregenerated sensors for ABCF3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000003234Ensembl transcript IDs: ENSMUST00000003319.6, ENSMUST00000148679.2, ENSMUST00000231258.2, ENSMUST00000232490.2, ENSMUST00000232680.2
Found 147 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CACTGCCGTTCTCACACACCCACAGCTCCTTGCACACCAGTCGGATaGAGCGCTCATCATGAGATACCAGAATTACACCACCCTGAAAGA | + |
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Preference number: 1 (lower is better) Translates to: HCRSHTPTAPCTPVG*SAHHEIPELHHPER Trigger: TCTTTCAGGGTGGTGTAATTCTGGTATCTCATGATGAGCGCTTCATCCGACTGGTGTGCAAGGAGCTGTGGGTGTGTGAGAACGGCAGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148679.2 |
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| 3UTR CCA 90 bp | TCACAGGAAAGTAACAGAGAGCCCAGAACCCAGAGCAGAAAACCATaGCAAGCCCTGCCCATGAACGAGCAGAGAGGCAAAAGAGATCCA | + |
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Preference number: 1 (lower is better) Translates to: SQESNREPRTQSRKP*QALPMNEQRGKRDP Trigger: TGGATCTCTTTTGCCTCTCTGCTCGTTCATGGGCAGGGCTTGCCATGGTTTTCTGCTCTGGGTTCTGGGCTCTCTGTTACTTTCCTGTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003319.6 |
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| 3UTR CCA 90 bp | ATAGCATCCCCTATCCTTTTCCTTCAGGACTGTTTCACAGGCCCTTaGATAGGTCTCCCACATTGTGCAGAGGATGCTCCAGTTGAAAGG | + |
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Preference number: 1 (lower is better) Translates to: IASPILFLQDCFTGP*IGLPHCAEDAPVER Trigger: CCTTTCAACTGGAGCATCCTCTGCACAATGTGGGAGACCTATCCAAGGGCCTGTGAAACAGTCCTGAAGGAAAAGGATAGGGGATGCTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003319.6 ENSMUST00000148679.2 |
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| 3UTR CAA 90 bp | CTCCATCCCCTAGCTCAAGCTCACCTCAGGGACAGACGGATGACATaGCCCAACAAGAGGAAGGCTGGACTGCTGCTGCTTTGTCTGTAT | + |
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Preference number: 2 (lower is better) Translates to: LHPLAQAHLRDRRMT*PNKRKAGLLLLCLY Trigger: ATACAGACAAAGCAGCAGCAGTCCAGCCTTCCTCTTGTTGGGCAATGTCATCCGTCTGTCCCTGAGGTGAGCTTGAGCTAGGGGATGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003319.6 |
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| 3UTR-3UTR TCA 90 bp | AGAGGAAGCCCTCCCGGCGGAACTGTTCTTGGAGGAGGGCCCGGTACTGGTCAAATGAAGCGCTCATCATaGGATACCAGAATTACACCA | + |
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Preference number: 2 (lower is better) Translates to: RGSPPGGTVLGGGPGTGQMKRSS*DTRITP Trigger: TGGTGTAATTCTGGTATCTCATGATGAGCGCTTCAT...TTGACCAGTACCGGGCCCTCCTCCAAGAACAGTTCCGCCGGGAGGGCTTCCTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148679.2 |
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| 3UTR-3UTR GCA 90 bp | GGGGATTTAATTTACACAGCAGCCATGTTGGGCCCTGCCAAGCTGGGCAGTGGGAAGCTTGGAGTTGGTTaGCTACATGGTAGCTCAGGG | + |
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Preference number: 2 (lower is better) Translates to: GDLIYTAAMLGPAKLGSGKLGVG*LHGSSG Trigger: CCCTGAGCTACCATGTAGGCAACCAACTCCAAGCTT...CCCACTGCCCAGCTTGGCAGGGCCCAACATGGCTGCTGTGTAAATTAAATCCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003319.6 ENSMUST00000148679.2 |
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| 3UTR-3UTR TCA 90 bp | AGGAGGGGATTTAATTTACACAGCAGCCATGTTGGGCCCTGCCAAGCTGGGCAGGCTGCTTTGTCTGTATaGCTGACAGTCACATCACAG | + |
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Preference number: 2 (lower is better) Translates to: RRGFNLHSSHVGPCQAGQAALSV*LTVTSQ Trigger: CTGTGATGTGACTGTCAGTCATACAGACAAAGCAGC...CTGCCCAGCTTGGCAGGGCCCAACATGGCTGCTGTGTAAATTAAATCCCCTCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003319.6 |
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| 3UTR-3UTR GCA 90 bp | TTCCTTCAGGACTGTTTCACAGGCCCTTGGATAGGTCTCCCACATTGTGCAGAGAAGCTTGGAGTTGGTTaGCTACATGGTAGCTCAGGG | + |
|
Preference number: 2 (lower is better) Translates to: FLQDCFTGPWIGLPHCAEKLGVG*LHGSSG Trigger: CCCTGAGCTACCATGTAGGCAACCAACTCCAAGCTT...CTCTGCACAATGTGGGAGACCTATCCAAGGGCCTGTGAAACAGTCCTGAAGGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003319.6 ENSMUST00000148679.2 |
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| 3UTR-3UTR CAA 90 bp | ATCCCCTATCCTTTTCCTTCAGGACTGTTTCACAGGCCCTTGGATAGGTCTCCCCCGGCGGAACTGTTCTaGGAGGAGGGCCCGGTACTG | + |
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Preference number: 3 (lower is better) Translates to: IPYPFPSGLFHRPLDRSPPAELF*EEGPVL Trigger: CAGTACCGGGCCCTCCTCCAAGAACAGTTCCGCCGG...GGGAGACCTATCCAAGGGCCTGTGAAACAGTCCTGAAGGAAAAGGATAGGGGAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000148679.2 |
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| 3UTR TCA 72 bp | GAACCCAGAGCAGAAAACCATGGCAAGCCCTGCCCATaGACGAGCAGAGAGGCAAAAGAGATCCAGGAGGGG | + |
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Preference number: 3 (lower is better) Translates to: EPRAENHGKPCP*TSREAKEIQEG Trigger: CCCCTCCTGGATCTCTTTTGCCTCTCTGCTCGTTCATGGGCAGGGCTTGCCATGGTTTTCTGCTCTGGGTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003319.6 |
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| 3UTR-3UTR CAA 90 bp | AGGAGGGGATTTAATTTACACAGCAGCCATGTTGGGCCCTGCCAAGCTGGGCAGCTGTTTCACAGGCCCTaGGATAGGTCTCCCACATTG | + |
|
Preference number: 3 (lower is better) Translates to: RRGFNLHSSHVGPCQAGQLFHRP*DRSPTL Trigger: CAATGTGGGAGACCTATCCAAGGGCCTGTGAAACAG...CTGCCCAGCTTGGCAGGGCCCAACATGGCTGCTGTGTAAATTAAATCCCCTCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003319.6 ENSMUST00000148679.2 |
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| 3UTR CCA 72 bp | AGTAACAGAGAGCCCAGAACCCAGAGCAGAAAACCATaGCAAGCCCTGCCCATGAACGAGCAGAGAGGCAAA | + |
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Preference number: 3 (lower is better) Translates to: SNREPRTQSRKP*QALPMNEQRGK Trigger: TTTGCCTCTCTGCTCGTTCATGGGCAGGGCTTGCCATGGTTTTCTGCTCTGGGTTCTGGGCTCTCTGTTACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003319.6 |
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| 3UTR TCA 72 bp | TCTCACACACCCACAGCTCCTTGCACACCAGTCGGATaGAGCGCTCATCATGAGATACCAGAATTACACCAC | + |
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Preference number: 3 (lower is better) Translates to: SHTPTAPCTPVG*SAHHEIPELHH Trigger: GTGGTGTAATTCTGGTATCTCATGATGAGCGCTTCATCCGACTGGTGTGCAAGGAGCTGTGGGTGTGTGAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148679.2 |
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| 3UTR CCA 72 bp | CCTATCCTTTTCCTTCAGGACTGTTTCACAGGCCCTTaGATAGGTCTCCCACATTGTGCAGAGGATGCTCCA | + |
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Preference number: 3 (lower is better) Translates to: PILFLQDCFTGP*IGLPHCAEDAP Trigger: TGGAGCATCCTCTGCACAATGTGGGAGACCTATCCAAGGGCCTGTGAAACAGTCCTGAAGGAAAAGGATAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003319.6 ENSMUST00000148679.2 |
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| 3UTR-3UTR CAA 90 bp | AGTCCTAAGCTTGGAGTTGGTTGCCTACATGGTAGCTCAGGGATCTTCCAAAACCTGTTTCACAGGCCCTaGGATAGGTCTCCCACATTG | + |
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Preference number: 3 (lower is better) Translates to: SPKLGVGCLHGSSGIFQNLFHRP*DRSPTL Trigger: CAATGTGGGAGACCTATCCAAGGGCCTGTGAAACAG...GTTTTGGAAGATCCCTGAGCTACCATGTAGGCAACCAACTCCAAGCTTAGGACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003319.6 ENSMUST00000148679.2 |
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| 3UTR TCA 72 bp | AGGAAGGCTGGACTGCTGCTGCTTTGTCTGTATGACTaGCAGTCACATCACAGGAAAGTAACAGAGAGCCCA | + |
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Preference number: 3 (lower is better) Translates to: RKAGLLLLCLYD*QSHHRKVTESP Trigger: TGGGCTCTCTGTTACTTTCCTGTGATGTGACTGTCAGTCATACAGACAAAGCAGCAGCAGTCCAGCCTTCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003319.6 |
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| CDS-3UTR CCA 90 bp | GCCCAGAACCCAGAGCAGAAAACCATGGCAAGCCCTGCCCATGAACGAGCAGAGTGGCGATACTGCTGCTaGGCCTCATACTCGCGCTGC | + |
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Preference number: 4 (lower is better) Translates to: AQNPEQKTMASPAHERAEWRYCC*ASYSRC Trigger: GCAGCGCGAGTATGAGGCCCAGCAGCAGTATCGCCA...CTCTGCTCGTTCATGGGCAGGGCTTGCCATGGTTTTCTGCTCTGGGTTCTGGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003319.6 |
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| CDS-3UTR TCA 90 bp | AGGGGATTTAATTTACACAGCAGCCATGTTGGGCCCTGCCAAGCTGGGCAGTGGACTCGCGCTGCTGGTTaGGAAGGCGCTCCTGCTTGC | + |
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Preference number: 4 (lower is better) Translates to: RGFNLHSSHVGPCQAGQWTRAAG*EGAPAC Trigger: GCAAGCAGGAGCGCCTTCTCAACCAGCAGCGCGAGT...CCACTGCCCAGCTTGGCAGGGCCCAACATGGCTGCTGTGTAAATTAAATCCCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003319.6 |
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| CDS-3UTR CCA 90 bp | TTGGGCCCTGCCAAGCTGGGCAGTGGGGTACTTATAACCCCAGATAGCATCCCCGCTACCCGGCTTTTCTaGCCCCCAGATAAGCTCGCA | + |
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Preference number: 4 (lower is better) Translates to: LGPAKLGSGVLITPDSIPATRLF*PPDKLA Trigger: TGCGAGCTTATCTGGGGGCCAGAAAAGCCGGGTAGC...GGGGATGCTATCTGGGGTTATAAGTACCCCACTGCCCAGCTTGGCAGGGCCCAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt. Matches the following 2 transcripts: ENSMUST00000003319.6 ENSMUST00000148679.2 |
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| CDS-3UTR CCA 90 bp | TTGGGCCCTGCCAAGCTGGGCAGTGGGGTACTTATAACCCCAGATAGCATCCCCTCTTCGACAACTGGATaGGGGCGTCCAGTAGCACCT | + |
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Preference number: 4 (lower is better) Translates to: LGPAKLGSGVLITPDSIPSSTTG*GRPVAP Trigger: AGGTGCTACTGGACGCCCCCATCCAGTTGTCGAAGA...GGGGATGCTATCTGGGGTTATAAGTACCCCACTGCCCAGCTTGGCAGGGCCCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000003319.6 |
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| CDS-3UTR GCA 90 bp | GCCCAGAACCCAGAGCAGAAAACCATGGCAAGCCCTGCCCATGAACGAGCAGAGTCCCCGGACACTTCTTaGAATAGTTCCCCGACAGCT | + |
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Preference number: 4 (lower is better) Translates to: AQNPEQKTMASPAHERAESPDTS*NSSPTA Trigger: AGCTGTCGGGGAACTATTGCAAGAAGTGTCCGGGGA...CTCTGCTCGTTCATGGGCAGGGCTTGCCATGGTTTTCTGCTCTGGGTTCTGGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000003319.6 |
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| CDS-3UTR CCA 90 bp | AGGGGATTTAATTTACACAGCAGCCATGTTGGGCCCTGCCAAGCTGGGCAGTGGGCGTCCAGTAGCACCTaGCTGTTTCCCTGGTTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: RGFNLHSSHVGPCQAGQWASSST*LFPWFC Trigger: GCAGAACCAGGGAAACAGCCAGGTGCTACTGGACGC...CCACTGCCCAGCTTGGCAGGGCCCAACATGGCTGCTGTGTAAATTAAATCCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003319.6 |
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| CDS-3UTR CCA 90 bp | GCCCAGAACCCAGAGCAGAAAACCATGGCAAGCCCTGCCCATGAACGAGCAGAGAAAACCTGGATGTGTTaGCGATACTGCTGCTGGGCC | + |
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Preference number: 4 (lower is better) Translates to: AQNPEQKTMASPAHERAEKTWMC*RYCCWA Trigger: GGCCCAGCAGCAGTATCGCCAACACATCCAGGTTTT...CTCTGCTCGTTCATGGGCAGGGCTTGCCATGGTTTTCTGCTCTGGGTTCTGGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003319.6 |
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| CDS-3UTR CCA 90 bp | TCCCCTATCCTTTTCCTTCAGGACTGTTTCACAGGCCCTTGGATAGGTCTCCCACGGCGGAACTGTTCTTaGAGGAGGGCCCGGTACTGG | + |
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Preference number: 4 (lower is better) Translates to: SPILFLQDCFTGPWIGLPRRNCS*RRARYW Trigger: CCAGTACCGGGCCCTCCTCCAAGAACAGTTCCGCCG...TGGGAGACCTATCCAAGGGCCTGTGAAACAGTCCTGAAGGAAAAGGATAGGGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003319.6 |
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| CDS-3UTR TCA 90 bp | TTGGGCCCTGCCAAGCTGGGCAGTGGGGTACTTATAACCCCAGATAGCATCCCCGGCTATGCAAGTGGATaGTGTCTGTGGCAATGGCAT | + |
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Preference number: 4 (lower is better) Translates to: LGPAKLGSGVLITPDSIPGYASG*CLWQWH Trigger: ATGCCATTGCCACAGACATCATCCACTTGCATAGCC...GGGGATGCTATCTGGGGTTATAAGTACCCCACTGCCCAGCTTGGCAGGGCCCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000003319.6 |
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| CDS-3UTR CCA 90 bp | TCCCCTATCCTTTTCCTTCAGGACTGTTTCACAGGCCCTTGGATAGGTCTCCCATTTCTGCTGCCTGCCTaGCTAGCTGACGCCTCCTCC | + |
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Preference number: 4 (lower is better) Translates to: SPILFLQDCFTGPWIGLPFLLPA*LADASS Trigger: GGAGGAGGCGTCAGCTAGCCAGGCAGGCAGCAGAAA...TGGGAGACCTATCCAAGGGCCTGTGAAACAGTCCTGAAGGAAAAGGATAGGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003319.6 |
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| 3UTR CAA 72 bp | CTAGCTCAAGCTCACCTCAGGGACAGACGGATGACATaGCCCAACAAGAGGAAGGCTGGACTGCTGCTGCTT | + |
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Preference number: 4 (lower is better) Translates to: LAQAHLRDRRMT*PNKRKAGLLLL Trigger: AAGCAGCAGCAGTCCAGCCTTCCTCTTGTTGGGCAATGTCATCCGTCTGTCCCTGAGGTGAGCTTGAGCTAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003319.6 |
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| CDS-3UTR TCA 90 bp | GGCCCTTGGATAGGTCTCCCACATTGTGCAGAGGATGCTCCAGTTGAAAGGAAAGCCCGCAAGAATGACTaGTGCTCTGGCAGGTGCCTT | + |
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Preference number: 4 (lower is better) Translates to: GPWIGLPHCAEDAPVERKARKND*CSGRCL Trigger: AAGGCACCTGCCAGAGCATCAGTCATTCTTGCGGGC...TTTCCTTTCAACTGGAGCATCCTCTGCACAATGTGGGAGACCTATCCAAGGGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003319.6 |
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| CDS-3UTR GCA 90 bp | AGGAGGGGATTTAATTTACACAGCAGCCATGTTGGGCCCTGCCAAGCTGGGCAGGGCAGGTGCCTTATCTaGCTCAATCTCCTCCAGCTT | + |
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Preference number: 4 (lower is better) Translates to: RRGFNLHSSHVGPCQAGQGRCLI*LNLLQL Trigger: AAGCTGGAGGAGATTGAGGCAGATAAGGCACCTGCC...CTGCCCAGCTTGGCAGGGCCCAACATGGCTGCTGTGTAAATTAAATCCCCTCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003319.6 |
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| CDS-3UTR CCA 90 bp | TCCAGGAGGGGATTTAATTTACACAGCAGCCATGTTGGGCCCTGCCAAGCTGGGGGCCCAAAGCTTCAATaGTCTCCATGTCCAGGTGGT | + |
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Preference number: 4 (lower is better) Translates to: SRRGFNLHSSHVGPCQAGGPKLQ*SPCPGG Trigger: ACCACCTGGACATGGAGACCATTGAAGCTTTGGGCC...CCCAGCTTGGCAGGGCCCAACATGGCTGCTGTGTAAATTAAATCCCCTCCTGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000003319.6 ENSMUST00000148679.2 |
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| CDS-3UTR TCA 90 bp | GAGCAGAGAGGCAAAAGAGATCCAGGAGGGGATTTAATTTACACAGCAGCCATGCAGCTGTGCAGCTTCTaGACCTTCTGCCCTGCCAGC | + |
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Preference number: 4 (lower is better) Translates to: EQRGKRDPGGDLIYTAAMQLCSF*TFCPAS Trigger: GCTGGCAGGGCAGAAGGTTCAGAAGCTGCACAGCTG...CATGGCTGCTGTGTAAATTAAATCCCCTCCTGGATCTCTTTTGCCTCTCTGCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003319.6 |
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| CDS-3UTR TCA 90 bp | GCCCAGAACCCAGAGCAGAAAACCATGGCAAGCCCTGCCCATGAACGAGCAGAGAGTTTACTCTGCACTTaGGAGGCTCTGTTTGCATTG | + |
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Preference number: 4 (lower is better) Translates to: AQNPEQKTMASPAHERAESLLCT*EALFAL Trigger: CAATGCAAACAGAGCCTCTCAAGTGCAGAGTAAACT...CTCTGCTCGTTCATGGGCAGGGCTTGCCATGGTTTTCTGCTCTGGGTTCTGGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003319.6 |
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| CDS-3UTR GCA 90 bp | GCCCAGAACCCAGAGCAGAAAACCATGGCAAGCCCTGCCCATGAACGAGCAGAGTCCCTGGTAGGCTGCTaGTGCATTTTAGGAGTAAAA | + |
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Preference number: 4 (lower is better) Translates to: AQNPEQKTMASPAHERAESLVGC*CILGVK Trigger: TTTTACTCCTAAAATGCAGCAGCAGCCTACCAGGGA...CTCTGCTCGTTCATGGGCAGGGCTTGCCATGGTTTTCTGCTCTGGGTTCTGGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003319.6 |
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| CDS-3UTR CCA 90 bp | GCCCAGAACCCAGAGCAGAAAACCATGGCAAGCCCTGCCCATGAACGAGCAGAGCATCCAGCATGTTTGTaGGTTCGTCTAACAGCAGAA | + |
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Preference number: 4 (lower is better) Translates to: AQNPEQKTMASPAHERAEHPACL*VRLTAE Trigger: TTCTGCTGTTAGACGAACCCACAAACATGCTGGATG...CTCTGCTCGTTCATGGGCAGGGCTTGCCATGGTTTTCTGCTCTGGGTTCTGGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003319.6 |
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| CDS-3UTR CCA 90 bp | GTCCTAAGCTTGGAGTTGGTTGCCTACATGGTAGCTCAGGGATCTTCCAAAACCGCTACCCGGCTTTTCTaGCCCCCAGATAAGCTCGCA | + |
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Preference number: 4 (lower is better) Translates to: VLSLELVAYMVAQGSSKTATRLF*PPDKLA Trigger: TGCGAGCTTATCTGGGGGCCAGAAAAGCCGGGTAGC...GGTTTTGGAAGATCCCTGAGCTACCATGTAGGCAACCAACTCCAAGCTTAGGAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000003319.6 ENSMUST00000148679.2 |
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| 3UTR CAA 72 bp | CCCTATCCTTTTCCTTCAGGACTGTTTCACAGGCCCTaGGATAGGTCTCCCACATTGTGCAGAGGATGCTCC | + |
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Preference number: 4 (lower is better) Translates to: PYPFPSGLFHRP*DRSPTLCRGCS Trigger: GGAGCATCCTCTGCACAATGTGGGAGACCTATCCAAGGGCCTGTGAAACAGTCCTGAAGGAAAAGGATAGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003319.6 ENSMUST00000148679.2 |
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| 3UTR CAA 72 bp | GAAATGAGAGACAGGGCCAGAGATCCCAGAAAGCAGTaGGTGAGCCGTGTGAGGCCAGAATTCAGTCAGTTC | + |
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Preference number: 4 (lower is better) Translates to: EMRDRARDPRKQ*VSRVRPEFSQF Trigger: GAACTGACTGAATTCTGGCCTCACACGGCTCACCAACTGCTTTCTGGGATCTCTGGCCCTGTCTCTCATTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003319.6 |
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| CDS-3UTR TCA 90 bp | AGGCTGTCCCCAAGTAGGGAAAGTCCTAAGCTTGGAGTTGGTTGCCTACATGGTGTGTTGTACATGCGCTaGCAGACAGCCCTAATGCCA | + |
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Preference number: 4 (lower is better) Translates to: RLSPSRESPKLGVGCLHGVLYMR*QTALMP Trigger: TGGCATTAGGGCTGTCTGTCAGCGCATGTACAACAC...ACCATGTAGGCAACCAACTCCAAGCTTAGGACTTTCCCTACTTGGGGACAGCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003319.6 |
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| CDS-3UTR TCA 90 bp | TTGGGCCCTGCCAAGCTGGGCAGTGGGGTACTTATAACCCCAGATAGCATCCCCCTTGTTCTTGCCAGATaGTTCCAATCGACTCTCTTT | + |
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Preference number: 4 (lower is better) Translates to: LGPAKLGSGVLITPDSIPLVLAR*FQSTLF Trigger: AAAGAGAGTCGATTGGAATCATCTGGCAAGAACAAG...GGGGATGCTATCTGGGGTTATAAGTACCCCACTGCCCAGCTTGGCAGGGCCCAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000003319.6 |
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| CDS-3UTR GCA 90 bp | CCTTGGATAGGTCTCCCACATTGTGCAGAGGATGCTCCAGTTGAAAGGAAAAGAACTCGAAATCCGCGCTaGCACTGTGCAAGACACCGG | + |
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Preference number: 4 (lower is better) Translates to: PWIGLPHCAEDAPVERKRTRNPR*HCARHR Trigger: CCGGTGTCTTGCACAGTGGCAGCGCGGATTTCGAGT...TCTTTTCCTTTCAACTGGAGCATCCTCTGCACAATGTGGGAGACCTATCCAAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003319.6 |
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| CDS-3UTR CCA 90 bp | GTCAGTTCAAACTCCCAAGCAGCAGGGGCTGAGACAGTAGAGCCCACGACCCTCGCAGTCCTGGAAGTTTaGTGTCACAGTCATAGTTTT | + |
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Preference number: 4 (lower is better) Translates to: VSSNSQAAGAETVEPTTLAVLEV*CHSHSF Trigger: AAAACTATGACTGTGACACCAAACTTCCAGGACTGC...GAGGGTCGTGGGCTCTACTGTCTCAGCCCCTGCTGCTTGGGAGTTTGAACTGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003319.6 |
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| CDS-3UTR CCA 90 bp | GTTGCCTACATGGTAGCTCAGGGATCTTCCAAAACCAGTCCACGTCCTAGGCACATCTTCAGATTCCTGTaGGCATGCCTGATACCCCGA | + |
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Preference number: 4 (lower is better) Translates to: VAYMVAQGSSKTSPRPRHIFRFL*ACLIPR Trigger: TCGGGGTATCAGGCATGCCCACAGGAATCTGAAGAT...GTGCCTAGGACGTGGACTGGTTTTGGAAGATCCCTGAGCTACCATGTAGGCAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003319.6 |
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| CDS-3UTR CCA 90 bp | CTGTCCCCAAGTAGGGAAAGTCCTAAGCTTGGAGTTGGTTGCCTACATGGTAGCGGCCCAAAGCTTCAATaGTCTCCATGTCCAGGTGGT | + |
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Preference number: 4 (lower is better) Translates to: LSPSRESPKLGVGCLHGSGPKLQ*SPCPGG Trigger: ACCACCTGGACATGGAGACCATTGAAGCTTTGGGCC...GCTACCATGTAGGCAACCAACTCCAAGCTTAGGACTTTCCCTACTTGGGGACAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003319.6 ENSMUST00000148679.2 |
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| CDS-3UTR TCA 90 bp | TTCCTTCAGGACTGTTTCACAGGCCCTTGGATAGGTCTCCCACATTGTGCAGAGCTGCAGAATGGGCGGTaGGAACTTCTCAAATCCATC | + |
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Preference number: 4 (lower is better) Translates to: FLQDCFTGPWIGLPHCAELQNGR*ELLKSI Trigger: GATGGATTTGAGAAGTTCTCACCGCCCATTCTGCAG...CTCTGCACAATGTGGGAGACCTATCCAAGGGCCTGTGAAACAGTCCTGAAGGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003319.6 |
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| CDS-3UTR TCA 90 bp | CCACAGCTCCTTGCACACCAGTCGGATGAAGCGCTCATCATGAGATACCAGAATTACCGGCCCAATTGGTaGCGATATTCCTCTTCAGGT | + |
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Preference number: 4 (lower is better) Translates to: PQLLAHQSDEALIMRYQNYRPNW*RYSSSG Trigger: ACCTGAAGAGGAATATCGTCACCAATTGGGCCGGTA...ATTCTGGTATCTCATGATGAGCGCTTCATCCGACTGGTGTGCAAGGAGCTGTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148679.2 |
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| CDS-3UTR GCA 90 bp | CAGATAGCATCCCCTATCCTTTTCCTTCAGGACTGTTTCACAGGCCCTTGGATATGCCAGCGTCATCCTTaGTGTCCCCGGACACTTCTT | + |
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Preference number: 4 (lower is better) Translates to: QIASPILFLQDCFTGPWICQRHP*CPRTLL Trigger: AAGAAGTGTCCGGGGACAGCAAGGATGACGCTGGCA...TATCCAAGGGCCTGTGAAACAGTCCTGAAGGAAAAGGATAGGGGATGCTATCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000003319.6 |
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| CDS-3UTR GCA 90 bp | CGAGCAGAGAGGCAAAAGAGATCCAGGAGGGGATTTAATTTACACAGCAGCCATCTGTTTCCCTGGTTCTaGGGTTCAGCCAGGCGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: RAERQKRSRRGFNLHSSHLFPWF*GSARRR Trigger: TCTACGCCTGGCTGAACCGCAGAACCAGGGAAACAG...ATGGCTGCTGTGTAAATTAAATCCCCTCCTGGATCTCTTTTGCCTCTCTGCTCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003319.6 |
||
| CDS-3UTR GCA 90 bp | GATAGCATCCCCTATCCTTTTCCTTCAGGACTGTTTCACAGGCCCTTGGATAGGACGCTTCTCCTGCTTTaGCTTCAGTCGAGCTTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: DSIPYPFPSGLFHRPLDRTLLLL*LQSSFS Trigger: GCTGAAGCTCGACTGAAGGCAAAGCAGGAGAAGCGT...CCTATCCAAGGGCCTGTGAAACAGTCCTGAAGGAAAAGGATAGGGGATGCTATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003319.6 |
||
| CDS-3UTR GCA 90 bp | CTTGGAGTTGGTTGCCTACATGGTAGCTCAGGGATCTTCCAAAACCAGTCCACGTGCCAAGTTTACATCTaGTCCAGCCAGCAGTACCCT | + |
|
Preference number: 4 (lower is better) Translates to: LGVGCLHGSSGIFQNQSTCQVYI*SSQQYP Trigger: AGGGTACTGCTGGCTGGAGCAGATGTAAACTTGGCA...CGTGGACTGGTTTTGGAAGATCCCTGAGCTACCATGTAGGCAACCAACTCCAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003319.6 |
||
| CDS-3UTR GCA 90 bp | CATGAACGAGCAGAGAGGCAAAAGAGATCCAGGAGGGGATTTAATTTACACAGCTGTTGGCGATACTGCTaGTGGGCCTCATACTCGCGC | + |
|
Preference number: 4 (lower is better) Translates to: HERAERQKRSRRGFNLHSCWRYC*WASYSR Trigger: GCGCGAGTATGAGGCCCAGCAGCAGTATCGCCAACA...GCTGTGTAAATTAAATCCCCTCCTGGATCTCTTTTGCCTCTCTGCTCGTTCATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003319.6 |
||
| CDS-3UTR GCA 90 bp | GATAGCATCCCCTATCCTTTTCCTTCAGGACTGTTTCACAGGCCCTTGGATAGGTCCACCTCATCTAGCTaGAGAATGGGCGGTGAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: DSIPYPFPSGLFHRPLDRSTSSS*RMGGEN Trigger: GTTCTCACCGCCCATTCTGCAGCTAGATGAGGTGGA...CCTATCCAAGGGCCTGTGAAACAGTCCTGAAGGAAAAGGATAGGGGATGCTATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003319.6 |
||
| CDS-3UTR CCA 90 bp | TTCCTTCAGGACTGTTTCACAGGCCCTTGGATAGGTCTCCCACATTGTGCAGAGATTATCTTCGACAACTaGATGGGGGCGTCCAGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: FLQDCFTGPWIGLPHCAEIIFDN*MGASSS Trigger: GCTACTGGACGCCCCCATCCAGTTGTCGAAGATAAT...CTCTGCACAATGTGGGAGACCTATCCAAGGGCCTGTGAAACAGTCCTGAAGGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000003319.6 |
||
| 3UTR CAA 72 bp | GGCTGTCCCCAAGTAGGGAAAGTCCTAAGCTTGGAGTaGGTTGCCTACATGGTAGCTCAGGGATCTTCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: GCPQVGKVLSLE*VAYMVAQGSSK Trigger: TTTGGAAGATCCCTGAGCTACCATGTAGGCAACCAACTCCAAGCTTAGGACTTTCCCTACTTGGGGACAGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003319.6 ENSMUST00000148679.2 |
||
| CDS-3UTR TCA 90 bp | GGCCCTTGGATAGGTCTCCCACATTGTGCAGAGGATGCTCCAGTTGAAAGGAAAGGAGTTCCACAGCACTaGCATTCAAGTCTAGCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: GPWIGLPHCAEDAPVERKGVPQH*HSSLAV Trigger: AACAGCTAGACTTGAATGTCAGTGCTGTGGAACTCC...TTTCCTTTCAACTGGAGCATCCTCTGCACAATGTGGGAGACCTATCCAAGGGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003319.6 ENSMUST00000148679.2 |
||
| CDS-3UTR TCA 90 bp | TCCCCTATCCTTTTCCTTCAGGACTGTTTCACAGGCCCTTGGATAGGTCTCCCAGGAGTTCCACAGCACTaGCATTCAAGTCTAGCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: SPILFLQDCFTGPWIGLPGVPQH*HSSLAV Trigger: AACAGCTAGACTTGAATGTCAGTGCTGTGGAACTCC...TGGGAGACCTATCCAAGGGCCTGTGAAACAGTCCTGAAGGAAAAGGATAGGGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003319.6 ENSMUST00000148679.2 |
||
| CDS-3UTR GCA 90 bp | CATGAACGAGCAGAGAGGCAAAAGAGATCCAGGAGGGGATTTAATTTACACAGCCCCCAACCACACAGATaGGGGACTCAAGATCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: HERAERQKRSRRGFNLHSPQPHR*GTQDQQ Trigger: CTGCTGATCTTGAGTCCCGCATCTGTGTGGTTGGGG...GCTGTGTAAATTAAATCCCCTCCTGGATCTCTTTTGCCTCTCTGCTCGTTCATG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000003319.6 |
||
| CDS-3UTR CCA 90 bp | GTCCTAAGCTTGGAGTTGGTTGCCTACATGGTAGCTCAGGGATCTTCCAAAACCTCTCCAACCACAGGATaGCCCTTACATCCAGCATGT | + |
|
Preference number: 4 (lower is better) Translates to: VLSLELVAYMVAQGSSKTSPTTG*PLHPAC Trigger: ACATGCTGGATGTAAGGGCCATCCTGTGGTTGGAGA...GGTTTTGGAAGATCCCTGAGCTACCATGTAGGCAACCAACTCCAAGCTTAGGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003319.6 |
||
| CDS-3UTR CCA 90 bp | TGTCCCCAAGTAGGGAAAGTCCTAAGCTTGGAGTTGGTTGCCTACATGGTAGCTCGGTCGATGAAAACCTaGATGTGTTGGCGATACTGC | + |
|
Preference number: 4 (lower is better) Translates to: CPQVGKVLSLELVAYMVARSMKT*MCWRYC Trigger: GCAGTATCGCCAACACATCCAGGTTTTCATCGACCG...AGCTACCATGTAGGCAACCAACTCCAAGCTTAGGACTTTCCCTACTTGGGGACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003319.6 |
||
| CDS-3UTR TCA 90 bp | ATCCTTTTCCTTCAGGACTGTTTCACAGGCCCTTGGATAGGTCTCCCACATTGTTACCGGCCCAATTGGTaGCGATATTCCTCTTCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: ILFLQDCFTGPWIGLPHCYRPNW*RYSSSG Trigger: ACCTGAAGAGGAATATCGTCACCAATTGGGCCGGTA...ACAATGTGGGAGACCTATCCAAGGGCCTGTGAAACAGTCCTGAAGGAAAAGGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003319.6 ENSMUST00000148679.2 |
||
| CDS-3UTR GCA 90 bp | AGGCTGTCCCCAAGTAGGGAAAGTCCTAAGCTTGGAGTTGGTTGCCTACATGGTACTTCCTGCTCTACATaGAGTAGGGAAATATGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: RLSPSRESPKLGVGCLHGTSCST*SREIWA Trigger: AGCCCATATTTCCCTACTGCATGTAGAGCAGGAAGT...ACCATGTAGGCAACCAACTCCAAGCTTAGGACTTTCCCTACTTGGGGACAGCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003319.6 |
||
| CDS-3UTR GCA 90 bp | AGTCCTAAGCTTGGAGTTGGTTGCCTACATGGTAGCTCAGGGATCTTCCAAAACCTTTCCAGCACACTCTaGAAGGCAGGAGTGTCATCT | + |
|
Preference number: 4 (lower is better) Translates to: SPKLGVGCLHGSSGIFQNLSSTL*KAGVSS Trigger: AGATGACACTCCTGCCTTGCAGAGTGTGCTGGAAAG...GTTTTGGAAGATCCCTGAGCTACCATGTAGGCAACCAACTCCAAGCTTAGGACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003319.6 |
||
| CDS-3UTR GCA 90 bp | GTCCTAAGCTTGGAGTTGGTTGCCTACATGGTAGCTCAGGGATCTTCCAAAACCTCTAGCCGTTGGCTATaGAAGTGGATGATGTCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: VLSLELVAYMVAQGSSKTSSRWL*KWMMSV Trigger: CACAGACATCATCCACTTGCATAGCCAACGGCTAGA...GGTTTTGGAAGATCCCTGAGCTACCATGTAGGCAACCAACTCCAAGCTTAGGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003319.6 |
||
| CDS-3UTR TCA 90 bp | GGCCCTTGGATAGGTCTCCCACATTGTGCAGAGGATGCTCCAGTTGAAAGGAAAATGAAGCGCTCATCATaGGATACCAGAATTACACCA | + |
|
Preference number: 4 (lower is better) Translates to: GPWIGLPHCAEDAPVERKMKRSS*DTRITP Trigger: TGGTGTAATTCTGGTATCTCATGATGAGCGCTTCAT...TTTCCTTTCAACTGGAGCATCCTCTGCACAATGTGGGAGACCTATCCAAGGGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003319.6 |
||
| CDS-3UTR GCA 90 bp | CTTGGAGTTGGTTGCCTACATGGTAGCTCAGGGATCTTCCAAAACCAGTCCACGCATAGGACTTGTTCTTaGCAGATGATTCCAATCGAC | + |
|
Preference number: 4 (lower is better) Translates to: LGVGCLHGSSGIFQNQSTHRTCS*QMIPID Trigger: GTCGATTGGAATCATCTGGCAAGAACAAGTCCTATG...CGTGGACTGGTTTTGGAAGATCCCTGAGCTACCATGTAGGCAACCAACTCCAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003319.6 |
||
| CDS-3UTR GCA 90 bp | GAGCAGAGAGGCAAAAGAGATCCAGGAGGGGATTTAATTTACACAGCAGCCATGTTGAGAAGGCGCTCCTaGTTGCTCTTGATGAAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: EQRGKRDPGGDLIYTAAMLRRRS*LLLMKV Trigger: AACCTTCATCAAGAGCAAGCAGGAGCGCCTTCTCAA...CATGGCTGCTGTGTAAATTAAATCCCCTCCTGGATCTCTTTTGCCTCTCTGCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003319.6 |
||
| CDS-3UTR CCA 90 bp | AAGCTTGGAGTTGGTTGCCTACATGGTAGCTCAGGGATCTTCCAAAACCAGTCCAGACTAGAGGGTTGCTaGTCTTCAGTGTTTCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: KLGVGCLHGSSGIFQNQSRLEGC*SSVFPS Trigger: AGAAGGAAACACTGAAGACCAGCAACCCTCTAGTCT...GGACTGGTTTTGGAAGATCCCTGAGCTACCATGTAGGCAACCAACTCCAAGCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003319.6 |
||
| CDS-3UTR CCA 90 bp | CAGATAGCATCCCCTATCCTTTTCCTTCAGGACTGTTTCACAGGCCCTTGGATACGTTGGCTATGCAAGTaGATGATGTCTGTGGCAATG | + |
|
Preference number: 4 (lower is better) Translates to: QIASPILFLQDCFTGPWIRWLCK*MMSVAM Trigger: CATTGCCACAGACATCATCCACTTGCATAGCCAACG...TATCCAAGGGCCTGTGAAACAGTCCTGAAGGAAAAGGATAGGGGATGCTATCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003319.6 |
||
| CDS-3UTR TCA 90 bp | TATCCTTTTCCTTCAGGACTGTTTCACAGGCCCTTGGATAGGTCTCCCACATTGAGGAAGTTTCGGTCATaGGAGACAACTAGGATAGTG | + |
|
Preference number: 4 (lower is better) Translates to: YPFPSGLFHRPLDRSPTLRKFRS*ETTRIV Trigger: CACTATCCTAGTTGTCTCTCATGACCGAAACTTCCT...CAATGTGGGAGACCTATCCAAGGGCCTGTGAAACAGTCCTGAAGGAAAAGGATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003319.6 |
||
| CDS-3UTR GCA 90 bp | TATCCTTTTCCTTCAGGACTGTTTCACAGGCCCTTGGATAGGTCTCCCACATTGCTGGTAGGCTGCTGCTaGATTTTAGGAGTAAAACCA | + |
|
Preference number: 4 (lower is better) Translates to: YPFPSGLFHRPLDRSPTLLVGCC*ILGVKP Trigger: TGGTTTTACTCCTAAAATGCAGCAGCAGCCTACCAG...CAATGTGGGAGACCTATCCAAGGGCCTGTGAAACAGTCCTGAAGGAAAAGGATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000003319.6 |
||
| CDS-3UTR GCA 90 bp | AAGCTTGGAGTTGGTTGCCTACATGGTAGCTCAGGGATCTTCCAAAACCAGTCCTTGAGAGGCTCTGTTTaGATTGTATCGAAAACGGTC | + |
|
Preference number: 4 (lower is better) Translates to: KLGVGCLHGSSGIFQNQSLRGSV*IVSKTV Trigger: GACCGTTTTCGATACAATGCAAACAGAGCCTCTCAA...GGACTGGTTTTGGAAGATCCCTGAGCTACCATGTAGGCAACCAACTCCAAGCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003319.6 |
||
| CDS-3UTR CCA 90 bp | TGGATAGGTCTCCCACATTGTGCAGAGGATGCTCCAGTTGAAAGGAAAAGAGAACATCTAGCTGCAGAATaGGCGGTGAGAACTTCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: WIGLPHCAEDAPVERKREHLAAE*AVRTSQ Trigger: TTGAGAAGTTCTCACCGCCCATTCTGCAGCTAGATG...TTCTCTTTTCCTTTCAACTGGAGCATCCTCTGCACAATGTGGGAGACCTATCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003319.6 |
||
| CDS-3UTR GCA 90 bp | TTAATGCAAACTGGGAACAACAAAGGTTTCTCTTGTGCCCTTAAGGTCCAGATTAACTCCCTGGTAGGCTaGTGCTGCATTTTAGGAGTA | + |
|
Preference number: 4 (lower is better) Translates to: LMQTGNNKGFSCALKVQINSLVG*CCILGV Trigger: TACTCCTAAAATGCAGCAGCAGCCTACCAGGGAGTT...AATCTGGACCTTAAGGGCACAAGAGAAACCTTTGTTGTTCCCAGTTTGCATTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003319.6 |
||
| CDS-3UTR CAA 90 bp | GTCAGTTCAAACTCCCAAGCAGCAGGGGCTGAGACAGTAGAGCCCACGACCCTCCCGGCGGAACTGTTCTaGGAGGAGGGCCCGGTACTG | + |
|
Preference number: 5 (lower is better) Translates to: VSSNSQAAGAETVEPTTLPAELF*EEGPVL Trigger: CAGTACCGGGCCCTCCTCCAAGAACAGTTCCGCCGG...GAGGGTCGTGGGCTCTACTGTCTCAGCCCCTGCTGCTTGGGAGTTTGAACTGAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003319.6 |
||
| CDS GCA 90 bp | CTTCCCCAGACCATTGCGTCCCACCAGGCCGTAGCGTCGGCCCCATaGCAAGTTTACATCTGCTCCAGCCAGCAGTACCAGAGGGTTGCT | + |
|
Preference number: 5 (lower is better) Translates to: LPQTIASHQAVASAP*QVYICSSQQYQRVA Trigger: AGCAACCCTCTGGTACTGCTGGCTGGAGCAGATGTAAACTTGGCATGGGGCCGACGCTACGGCCTGGTGGGACGCAATGGTCTGGGGAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000232490.2 |
||
| CDS TCA 90 bp | CCCTGGTTCTGCGGTTCAGCCAGGCGTAGAGTGTTGTACATGCGCTaGCAGACAGCCCTAATGCCAGCGTCATCCTTGCTGTCCCCGGAC | + |
|
Preference number: 5 (lower is better) Translates to: PWFCGSARRRVLYMR*QTALMPASSLLSPD Trigger: GTCCGGGGACAGCAAGGATGACGCTGGCATTAGGGCTGTCTGTCAGCGCATGTACAACACTCTACGCCTGGCTGAACCGCAGAACCAGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003319.6 ENSMUST00000232490.2 |
||
| CDS GCA 90 bp | CTTCCCCAGACCATTGCGTCCCACCAGGCCGTAGCGTCGGCCCCATaGCAAGTTTACATCTGCTCCAGCCAGCAGTACCCTGTCACCAAA | + |
|
Preference number: 5 (lower is better) Translates to: LPQTIASHQAVASAP*QVYICSSQQYPVTK Trigger: TTTGGTGACAGGGTACTGCTGGCTGGAGCAGATGTAAACTTGGCATGGGGCCGACGCTACGGCCTGGTGGGACGCAATGGTCTGGGGAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003319.6 ENSMUST00000232680.2 |
||
| CDS GCA 90 bp | GCGTCCCACCAGGCCGTAGCGTCGGCCCCATGCCAAGTTTACATCTaGTCCAGCCAGCAGTACCAGAGGGTTGCTGGTCTTCAGTGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: ASHQAVASAPCQVYI*SSQQYQRVAGLQCF Trigger: GAAACACTGAAGACCAGCAACCCTCTGGTACTGCTGGCTGGAGCAGATGTAAACTTGGCATGGGGCCGACGCTACGGCCTGGTGGGACGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232490.2 |
||
| CDS GCA 90 bp | ACAGCCCTAATGCCAGCGTCATCCTTGCTGTCCCCGGACACTTCTTaGAATAGTTCCCCGACAGCTTCCACCAGGTCATCCACAGACTCG | + |
|
Preference number: 5 (lower is better) Translates to: TALMPASSLLSPDTS*NSSPTASTRSSTDS Trigger: CGAGTCTGTGGATGACCTGGTGGAAGCTGTCGGGGAACTATTGCAAGAAGTGTCCGGGGACAGCAAGGATGACGCTGGCATTAGGGCTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000003319.6 ENSMUST00000232490.2 ENSMUST00000232680.2 |
||
| CDS GCA 90 bp | GCGTCCCACCAGGCCGTAGCGTCGGCCCCATGCCAAGTTTACATCTaGTCCAGCCAGCAGTACCCTGTCACCAAAAGAGACATCAAAGTT | + |
|
Preference number: 5 (lower is better) Translates to: ASHQAVASAPCQVYI*SSQQYPVTKRDIKV Trigger: AACTTTGATGTCTCTTTTGGTGACAGGGTACTGCTGGCTGGAGCAGATGTAAACTTGGCATGGGGCCGACGCTACGGCCTGGTGGGACGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003319.6 ENSMUST00000232680.2 |
||
| CDS GCA 90 bp | CTCTGCAAGGCAGGAGTGTCATCTCCAGCAACTTCCTGCTCTACATaGAGTAGGGAAATATGGGCTGGGACACGCAAGCTCCGGGTAGCC | + |
|
Preference number: 5 (lower is better) Translates to: LCKAGVSSPATSCST*SREIWAGTRKLRVA Trigger: GGCTACCCGGAGCTTGCGTGTCCCAGCCCATATTTCCCTACTGCATGTAGAGCAGGAAGTTGCTGGAGATGACACTCCTGCCTTGCAGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003319.6 ENSMUST00000232680.2 |
||
| CDS CCA 90 bp | CGAAAACGGTCGATGAAAACCTGGATGTGTTGGCGATACTGCTGCTaGGCCTCATACTCGCGCTGCTGGTTGAGAAGGCGCTCCTGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: RKRSMKTWMCWRYCC*ASYSRCWLRRRSCL Trigger: CAAGCAGGAGCGCCTTCTCAACCAGCAGCGCGAGTATGAGGCCCAGCAGCAGTATCGCCAACACATCCAGGTTTTCATCGACCGTTTTCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000003319.6 ENSMUST00000231258.2 ENSMUST00000232680.2 |
||
| CDS GCA 90 bp | TGCCGTAGCAGGTCCTCTCGTACGGTGTCACTTTCCAGCACACTCTaGAAGGCAGGAGTGTCATCTCCAGCAACTTCCTGCTCTACATGC | + |
|
Preference number: 5 (lower is better) Translates to: CRSRSSRTVSLSSTL*KAGVSSPATSCSTC Trigger: GCATGTAGAGCAGGAAGTTGCTGGAGATGACACTCCTGCCTTGCAGAGTGTGCTGGAAAGTGACACCGTACGAGAGGACCTGCTACGGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003319.6 ENSMUST00000232680.2 |
||
| CDS GCA 90 bp | ACCTGGATGTGTTGGCGATACTGCTGCTGGGCCTCATACTCGCGCTaGTGGTTGAGAAGGCGCTCCTGCTTGCTCTTGATGAAGGTTTCA | + |
|
Preference number: 5 (lower is better) Translates to: TWMCWRYCCWASYSR*WLRRRSCLLLMKVS Trigger: TGAAACCTTCATCAAGAGCAAGCAGGAGCGCCTTCTCAACCAGCAGCGCGAGTATGAGGCCCAGCAGCAGTATCGCCAACACATCCAGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003319.6 ENSMUST00000231258.2 ENSMUST00000232680.2 |
||
| CDS GCA 90 bp | TATCGAAAACGGTCGATGAAAACCTGGATGTGTTGGCGATACTGCTaGTGGGCCTCATACTCGCGCTGCTGGTTGAGAAGGCGCTCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: YRKRSMKTWMCWRYC*WASYSRCWLRRRSC Trigger: GCAGGAGCGCCTTCTCAACCAGCAGCGCGAGTATGAGGCCCAGCAGCAGTATCGCCAACACATCCAGGTTTTCATCGACCGTTTTCGATA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000003319.6 ENSMUST00000231258.2 ENSMUST00000232680.2 |
||
| CDS GCA 90 bp | CCCCAGATAAGCTCGCAACAGGACGCATGGCCAGTTCTCCAGAGATaGCATACCGGCCCAATTGGTGACGATATTCCTCTTCAGGTAGCC | + |
|
Preference number: 5 (lower is better) Translates to: PQISSQQDAWPVLQR*HTGPIGDDIPLQVA Trigger: GGCTACCTGAAGAGGAATATCGTCACCAATTGGGCCGGTATGGCATCTCTGGAGAACTGGCCATGCGTCCTGTTGCGAGCTTATCTGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003319.6 ENSMUST00000148679.2 |
||
| CDS CCA 90 bp | CATCCAGCATGTTTGTGGGTTCGTCTAACAGCAGAAGGTCTGGCCTaGCAAAGAGAGCTCGGGCTAAGGCCAATCTCATCCTCCAGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: HPACLWVRLTAEGLA*QRELGLRPISSSSH Trigger: GTGGCTGGAGGATGAGATTGGCCTTAGCCCGAGCTCTCTTTGCCAGGCCAGACCTTCTGCTGTTAGACGAACCCACAAACATGCTGGATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003319.6 ENSMUST00000232680.2 |
||
| CDS TCA 90 bp | GGACGCATGGCCAGTTCTCCAGAGATGCCATACCGGCCCAATTGGTaGCGATATTCCTCTTCAGGTAGCCCAGGAAATTTTCGAGCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: GRMASSPEMPYRPNW*RYSSSGSPGNFRAR Trigger: CCTGGCTCGAAAATTTCCTGGGCTACCTGAAGAGGAATATCGTCACCAATTGGGCCGGTATGGCATCTCTGGAGAACTGGCCATGCGTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003319.6 ENSMUST00000148679.2 |
||
| CDS CCA 90 bp | TTTTCCATTATCTTCGACAACTGGATGGGGGCGTCCAGTAGCACCTaGCTGTTTCCCTGGTTCTGCGGTTCAGCCAGGCGTAGAGTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: FSIIFDNWMGASSST*LFPWFCGSARRRVL Trigger: CAACACTCTACGCCTGGCTGAACCGCAGAACCAGGGAAACAGCCAGGTGCTACTGGACGCCCCCATCCAGTTGTCGAAGATAATGGAAAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000003319.6 ENSMUST00000232490.2 |
||
| CDS CCA 90 bp | TGGATGTGTTGGCGATACTGCTGCTGGGCCTCATACTCGCGCTGCTaGTTGAGAAGGCGCTCCTGCTTGCTCTTGATGAAGGTTTCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: WMCWRYCCWASYSRC*LRRRSCLLLMKVSK Trigger: CTTTGAAACCTTCATCAAGAGCAAGCAGGAGCGCCTTCTCAACCAGCAGCGCGAGTATGAGGCCCAGCAGCAGTATCGCCAACACATCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003319.6 ENSMUST00000231258.2 ENSMUST00000232680.2 |
||
| CDS TCA 90 bp | CACACCCACAGCTCCTTGCACACCAGTCGGATGAAGCGCTCATCATaGGATACCAGAATTACACCACCCCTGAAGTTGTTGAGAGCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: HTHSSLHTSRMKRSS*DTRITPPLKLLRAW Trigger: CCAGGCTCTCAACAACTTCAGGGGTGGTGTAATTCTGGTATCTCATGATGAGCGCTTCATCCGACTGGTGTGCAAGGAGCTGTGGGTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003319.6 |
||
| CDS CCA 90 bp | TTCTTGCCAGATGATTCCAATCGACTCTCTTTTCTGCTGCCTGCCTaGCTAGCTGACGCCTCCTCCAAGACTAGAGGGTTGCTGGTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: FLPDDSNRLSFLLPA*LADASSKTRGLLVF Trigger: GAAGACCAGCAACCCTCTAGTCTTGGAGGAGGCGTCAGCTAGCCAGGCAGGCAGCAGAAAAGAGAGTCGATTGGAATCATCTGGCAAGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003319.6 ENSMUST00000232680.2 |
||
| CDS-3UTR CAA 90 bp | TGTCCCCAAGTAGGGAAAGTCCTAAGCTTGGAGTTGGTTGCCTACATGGTAGCTATGCCAGCGTCATCCTaGCTGTCCCCGGACACTTCT | + |
|
Preference number: 5 (lower is better) Translates to: CPQVGKVLSLELVAYMVAMPASS*LSPDTS Trigger: AGAAGTGTCCGGGGACAGCAAGGATGACGCTGGCAT...AGCTACCATGTAGGCAACCAACTCCAAGCTTAGGACTTTCCCTACTTGGGGACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003319.6 |
||
| CDS-3UTR CAA 90 bp | CCTTGGATAGGTCTCCCACATTGTGCAGAGGATGCTCCAGTTGAAAGGAAAAGATACTCGCGCTGCTGGTaGAGAAGGCGCTCCTGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: PWIGLPHCAEDAPVERKRYSRCW*RRRSCL Trigger: CAAGCAGGAGCGCCTTCTCAACCAGCAGCGCGAGTA...TCTTTTCCTTTCAACTGGAGCATCCTCTGCACAATGTGGGAGACCTATCCAAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003319.6 |
||
| CDS-3UTR CAA 90 bp | AGATCCAGGAGGGGATTTAATTTACACAGCAGCCATGTTGGGCCCTGCCAAGCTGAAAACCTGGATGTGTaGGCGATACTGCTGCTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: RSRRGFNLHSSHVGPCQAENLDV*AILLLG Trigger: GCCCAGCAGCAGTATCGCCAACACATCCAGGTTTTC...AGCTTGGCAGGGCCCAACATGGCTGCTGTGTAAATTAAATCCCCTCCTGGATCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003319.6 |
||
| CDS-3UTR CAA 90 bp | GTCCTAAGCTTGGAGTTGGTTGCCTACATGGTAGCTCAGGGATCTTCCAAAACCCCACCCCTGAAGTTGTaGAGAGCCTGGCCCAAAGCT | + |
|
Preference number: 5 (lower is better) Translates to: VLSLELVAYMVAQGSSKTPPLKL*RAWPKA Trigger: AGCTTTGGGCCAGGCTCTCAACAACTTCAGGGGTGG...GGTTTTGGAAGATCCCTGAGCTACCATGTAGGCAACCAACTCCAAGCTTAGGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000003319.6 |
||
| CDS-3UTR CAA 90 bp | ATCCCCTATCCTTTTCCTTCAGGACTGTTTCACAGGCCCTTGGATAGGTCTCCCCTCACCCTGAAGTTGTaGAGAGCCTGGCCCAAAGCT | + |
|
Preference number: 5 (lower is better) Translates to: IPYPFPSGLFHRPLDRSPLTLKL*RAWPKA Trigger: AGCTTTGGGCCAGGCTCTCAACAACTTCAGGGTGAG...GGGAGACCTATCCAAGGGCCTGTGAAACAGTCCTGAAGGAAAAGGATAGGGGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000148679.2 |
||
| CDS CCA 90 bp | GTGTCATCTCCAGCAACTTCCTGCTCTACATGCAGTAGGGAAATATaGGCTGGGACACGCAAGCTCCGGGTAGCCAGCATCTTTAGCAAT | + |
|
Preference number: 5 (lower is better) Translates to: VSSPATSCSTCSREI*AGTRKLRVASIFSN Trigger: ATTGCTAAAGATGCTGGCTACCCGGAGCTTGCGTGTCCCAGCCCATATTTCCCTACTGCATGTAGAGCAGGAAGTTGCTGGAGATGACAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003319.6 ENSMUST00000232680.2 |
||
| CDS CCA 90 bp | GGTAATTCTCCAACCACAGGATGGCCCTTACATCCAGCATGTTTGTaGGTTCGTCTAACAGCAGAAGGTCTGGCCTGGCAAAGAGAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: GNSPTTGWPLHPACL*VRLTAEGLAWQREL Trigger: GAGCTCTCTTTGCCAGGCCAGACCTTCTGCTGTTAGACGAACCCACAAACATGCTGGATGTAAGGGCCATCCTGTGGTTGGAGAATTACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003319.6 ENSMUST00000232680.2 |
||
| CDS-3UTR CAA 90 bp | AGATCCAGGAGGGGATTTAATTTACACAGCAGCCATGTTGGGCCCTGCCAAGCTAACGCTTCTCCTGCTTaGCCTTCAGTCGAGCTTCAG | + |
|
Preference number: 5 (lower is better) Translates to: RSRRGFNLHSSHVGPCQANASPA*PSVELQ Trigger: CTGAAGCTCGACTGAAGGCAAAGCAGGAGAAGCGTT...AGCTTGGCAGGGCCCAACATGGCTGCTGTGTAAATTAAATCCCCTCCTGGATCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003319.6 |
||
| CDS-3UTR CAA 90 bp | GAACGAGCAGAGAGGCAAAAGAGATCCAGGAGGGGATTTAATTTACACAGCAGCCACACCCACAGCTCCTaGCACACCAGTCGGATGAAG | + |
|
Preference number: 5 (lower is better) Translates to: ERAERQKRSRRGFNLHSSHTHSS*HTSRMK Trigger: CTTCATCCGACTGGTGTGCAAGGAGCTGTGGGTGTG...GCTGCTGTGTAAATTAAATCCCCTCCTGGATCTCTTTTGCCTCTCTGCTCGTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003319.6 |
||
| CDS CCA 90 bp | GTTTGGTGTCACAGTCATAGTTTTCCATTATCTTCGACAACTGGATaGGGGCGTCCAGTAGCACCTGGCTGTTTCCCTGGTTCTGCGGTT | + |
|
Preference number: 5 (lower is better) Translates to: VWCHSHSFPLSSTTG*GRPVAPGCFPGSAV Trigger: AACCGCAGAACCAGGGAAACAGCCAGGTGCTACTGGACGCCCCCATCCAGTTGTCGAAGATAATGGAAAACTATGACTGTGACACCAAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000003319.6 ENSMUST00000232490.2 ENSMUST00000232680.2 |
||
| CDS GCA 90 bp | AGAGGGTTGCTGGTCTTCAGTGTTTCCTTCTCTGAACGCTTCTCCTaGTTTGCCTTCAGTCGAGCTTCAGCCTTCTCTAGTTTCTTCGCA | + |
|
Preference number: 5 (lower is better) Translates to: RGLLVFSVSFSERFS*FAFSRASAFSSFFA Trigger: TGCGAAGAAACTAGAGAAGGCTGAAGCTCGACTGAAGGCAAAGCAGGAGAAGCGTTCAGAGAAGGAAACACTGAAGACCAGCAACCCTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003319.6 ENSMUST00000232490.2 ENSMUST00000232680.2 |
||
| CDS-3UTR CAA 90 bp | TGTCCCCAAGTAGGGAAAGTCCTAAGCTTGGAGTTGGTTGCCTACATGGTAGCTAGAAGGCGCTCCTGCTaGCTCTTGATGAAGGTTTCA | + |
|
Preference number: 5 (lower is better) Translates to: CPQVGKVLSLELVAYMVARRRSC*LLMKVS Trigger: TGAAACCTTCATCAAGAGCAAGCAGGAGCGCCTTCT...AGCTACCATGTAGGCAACCAACTCCAAGCTTAGGACTTTCCCTACTTGGGGACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003319.6 |
||
| CDS-3UTR CAA 90 bp | ATCCTTTTCCTTCAGGACTGTTTCACAGGCCCTTGGATAGGTCTCCCACATTGTTCCAAGACTAGAGGGTaGCTGGTCTTCAGTGTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: ILFLQDCFTGPWIGLPHCSKTRG*LVFSVS Trigger: GGAAACACTGAAGACCAGCAACCCTCTAGTCTTGGA...ACAATGTGGGAGACCTATCCAAGGGCCTGTGAAACAGTCCTGAAGGAAAAGGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003319.6 |
||
| CDS-3UTR CAA 90 bp | ATCCCCTATCCTTTTCCTTCAGGACTGTTTCACAGGCCCTTGGATAGGTCTCCCCAGTTTACTCTGCACTaGAGAGGCTCTGTTTGCATT | + |
|
Preference number: 5 (lower is better) Translates to: IPYPFPSGLFHRPLDRSPQFTLH*RGSVCI Trigger: AATGCAAACAGAGCCTCTCAAGTGCAGAGTAAACTG...GGGAGACCTATCCAAGGGCCTGTGAAACAGTCCTGAAGGAAAAGGATAGGGGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000003319.6 |
||
| CDS GCA 90 bp | AAGAGACATCAAAGTTCTCAATTCGCACATCATAGGACTTGTTCTTaGCAGATGATTCCAATCGACTCTCTTTTCTGCTGCCTGCCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: KRHQSSQFAHHRTCS*QMIPIDSLFCCLPG Trigger: GCCAGGCAGGCAGCAGAAAAGAGAGTCGATTGGAATCATCTGGCAAGAACAAGTCCTATGATGTGCGAATTGAGAACTTTGATGTCTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003319.6 ENSMUST00000232680.2 |
||
| CDS GCA 90 bp | CTTCTCCAACATCTTCAGTTTACTCTGCACTTGAGAGGCTCTGTTTaGATTGTATCGAAAACGGTCGATGAAAACCTGGATGTGTTGGCG | + |
|
Preference number: 5 (lower is better) Translates to: LLQHLQFTLHLRGSV*IVSKTVDENLDVLA Trigger: CGCCAACACATCCAGGTTTTCATCGACCGTTTTCGATACAATGCAAACAGAGCCTCTCAAGTGCAGAGTAAACTGAAGATGTTGGAGAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000003319.6 ENSMUST00000231258.2 ENSMUST00000232680.2 |
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| CDS-3UTR CAA 90 bp | TTAATGCAAACTGGGAACAACAAAGGTTTCTCTTGTGCCCTTAAGGTCCAGATTCGCTCCTGCTTGCTCTaGATGAAGGTTTCAAAGTCC | + |
|
Preference number: 5 (lower is better) Translates to: LMQTGNNKGFSCALKVQIRSCLL*MKVSKS Trigger: GGACTTTGAAACCTTCATCAAGAGCAAGCAGGAGCG...AATCTGGACCTTAAGGGCACAAGAGAAACCTTTGTTGTTCCCAGTTTGCATTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003319.6 |
||
| CDS GCA 72 bp | ACCATTGCGTCCCACCAGGCCGTAGCGTCGGCCCCATaGCAAGTTTACATCTGCTCCAGCCAGCAGTACCCT | + |
|
Preference number: 6 (lower is better) Translates to: TIASHQAVASAP*QVYICSSQQYP Trigger: AGGGTACTGCTGGCTGGAGCAGATGTAAACTTGGCATGGGGCCGACGCTACGGCCTGGTGGGACGCAATGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003319.6 ENSMUST00000232680.2 |
||
| CDS GCA 72 bp | ACCATTGCGTCCCACCAGGCCGTAGCGTCGGCCCCATaGCAAGTTTACATCTGCTCCAGCCAGCAGTACCAG | + |
|
Preference number: 6 (lower is better) Translates to: TIASHQAVASAP*QVYICSSQQYQ Trigger: CTGGTACTGCTGGCTGGAGCAGATGTAAACTTGGCATGGGGCCGACGCTACGGCCTGGTGGGACGCAATGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232490.2 |
||
| CDS GCA 72 bp | CAGGCCGTAGCGTCGGCCCCATGCCAAGTTTACATCTaGTCCAGCCAGCAGTACCAGAGGGTTGCTGGTCTT | + |
|
Preference number: 6 (lower is better) Translates to: QAVASAPCQVYI*SSQQYQRVAGL Trigger: AAGACCAGCAACCCTCTGGTACTGCTGGCTGGAGCAGATGTAAACTTGGCATGGGGCCGACGCTACGGCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232490.2 |
||
| CDS CCA 72 bp | ATCTTCGACAACTGGATGGGGGCGTCCAGTAGCACCTaGCTGTTTCCCTGGTTCTGCGGTTCAGCCAGGCGT | + |
|
Preference number: 6 (lower is better) Translates to: IFDNWMGASSST*LFPWFCGSARR Trigger: ACGCCTGGCTGAACCGCAGAACCAGGGAAACAGCCAGGTGCTACTGGACGCCCCCATCCAGTTGTCGAAGAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000003319.6 ENSMUST00000232490.2 |
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| CDS CCA 72 bp | ATCTTCGACAACTGGATGGGGGCGTCCAGTAGCACCTaGCTGTTTCCCTGGTTCTGCGGTTCAGCCATGCGC | + |
|
Preference number: 6 (lower is better) Translates to: IFDNWMGASSST*LFPWFCGSAMR Trigger: GCGCATGGCTGAACCGCAGAACCAGGGAAACAGCCAGGTGCTACTGGACGCCCCCATCCAGTTGTCGAAGAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000232680.2 |
||
| CDS TCA 72 bp | TGGCTGTTTCCCTGGTTCTGCGGTTCAGCCATGCGCTaGCAGACAGCCCTAATGCCAGCGTCATCCTTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: WLFPWFCGSAMR*QTALMPASSLL Trigger: CAGCAAGGATGACGCTGGCATTAGGGCTGTCTGTCAGCGCATGGCTGAACCGCAGAACCAGGGAAACAGCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232680.2 |
||
| CDS GCA 72 bp | CAGGCCGTAGCGTCGGCCCCATGCCAAGTTTACATCTaGTCCAGCCAGCAGTACCCTGTCACCAAAAGAGAC | + |
|
Preference number: 6 (lower is better) Translates to: QAVASAPCQVYI*SSQQYPVTKRD Trigger: GTCTCTTTTGGTGACAGGGTACTGCTGGCTGGAGCAGATGTAAACTTGGCATGGGGCCGACGCTACGGCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003319.6 ENSMUST00000232680.2 |
||
| CDS GCA 72 bp | TGTTGGCGATACTGCTGCTGGGCCTCATACTCGCGCTaGTGGTTGAGAAGGCGCTCCTGCTTGCTCTTGATG | + |
|
Preference number: 6 (lower is better) Translates to: CWRYCCWASYSR*WLRRRSCLLLM Trigger: CATCAAGAGCAAGCAGGAGCGCCTTCTCAACCAGCAGCGCGAGTATGAGGCCCAGCAGCAGTATCGCCAACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003319.6 ENSMUST00000231258.2 ENSMUST00000232680.2 |
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| CDS CCA 72 bp | TGGCGATACTGCTGCTGGGCCTCATACTCGCGCTGCTaGTTGAGAAGGCGCTCCTGCTTGCTCTTGATGAAG | + |
|
Preference number: 6 (lower is better) Translates to: WRYCCWASYSRC*LRRRSCLLLMK Trigger: CTTCATCAAGAGCAAGCAGGAGCGCCTTCTCAACCAGCAGCGCGAGTATGAGGCCCAGCAGCAGTATCGCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003319.6 ENSMUST00000231258.2 ENSMUST00000232680.2 |
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| CDS TCA 72 bp | TGCGGTTCAGCCAGGCGTAGAGTGTTGTACATGCGCTaGCAGACAGCCCTAATGCCAGCGTCATCCTTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: CGSARRRVLYMR*QTALMPASSLL Trigger: CAGCAAGGATGACGCTGGCATTAGGGCTGTCTGTCAGCGCATGTACAACACTCTACGCCTGGCTGAACCGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003319.6 ENSMUST00000232490.2 |
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| CDS GCA 72 bp | CTTCCACCAGGTCATCCACAGACTCGAAATCCGCGCTaGCACTGTGCAAGACACCGGTCACGTAGTCGAAGA | + |
|
Preference number: 6 (lower is better) Translates to: LPPGHPQTRNPR*HCARHRSRSRR Trigger: TCTTCGACTACGTGACCGGTGTCTTGCACAGTGGCAGCGCGGATTTCGAGTCTGTGGATGACCTGGTGGAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003319.6 ENSMUST00000232490.2 ENSMUST00000232680.2 |
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| CDS GCA 72 bp | ATGCCAGCGTCATCCTTGCTGTCCCCGGACACTTCTTaGAATAGTTCCCCGACAGCTTCCACCAGGTCATCC | + |
|
Preference number: 6 (lower is better) Translates to: MPASSLLSPDTS*NSSPTASTRSS Trigger: GGATGACCTGGTGGAAGCTGTCGGGGAACTATTGCAAGAAGTGTCCGGGGACAGCAAGGATGACGCTGGCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000003319.6 ENSMUST00000232490.2 ENSMUST00000232680.2 |
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| CDS GCA 72 bp | CGGTCGATGAAAACCTGGATGTGTTGGCGATACTGCTaGTGGGCCTCATACTCGCGCTGCTGGTTGAGAAGG | + |
|
Preference number: 6 (lower is better) Translates to: RSMKTWMCWRYC*WASYSRCWLRR Trigger: CCTTCTCAACCAGCAGCGCGAGTATGAGGCCCAGCAGCAGTATCGCCAACACATCCAGGTTTTCATCGACCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003319.6 ENSMUST00000231258.2 ENSMUST00000232680.2 |
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| CDS CCA 72 bp | TCGATGAAAACCTGGATGTGTTGGCGATACTGCTGCTaGGCCTCATACTCGCGCTGCTGGTTGAGAAGGCGC | + |
|
Preference number: 6 (lower is better) Translates to: SMKTWMCWRYCC*ASYSRCWLRRR Trigger: GCGCCTTCTCAACCAGCAGCGCGAGTATGAGGCCCAGCAGCAGTATCGCCAACACATCCAGGTTTTCATCGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003319.6 ENSMUST00000231258.2 ENSMUST00000232680.2 |
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| CDS GCA 72 bp | AGGTCCTCTCGTACGGTGTCACTTTCCAGCACACTCTaGAAGGCAGGAGTGTCATCTCCAGCAACTTCCTGC | + |
|
Preference number: 6 (lower is better) Translates to: RSSRTVSLSSTL*KAGVSSPATSC Trigger: GCAGGAAGTTGCTGGAGATGACACTCCTGCCTTGCAGAGTGTGCTGGAAAGTGACACCGTACGAGAGGACCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003319.6 ENSMUST00000232680.2 |
||
| CDS TCA 72 bp | GCCCAGGAAATTTTCGAGCCAGGAGTTCCACAGCACTaGCATTCAAGTCTAGCTGTTCCACGTGGTGCTGGC | + |
|
Preference number: 6 (lower is better) Translates to: AQEIFEPGVPQH*HSSLAVPRGAG Trigger: GCCAGCACCACGTGGAACAGCTAGACTTGAATGTCAGTGCTGTGGAACTCCTGGCTCGAAAATTTCCTGGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003319.6 ENSMUST00000148679.2 |
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| CDS GCA 72 bp | GCAGGAGTGTCATCTCCAGCAACTTCCTGCTCTACATaGAGTAGGGAAATATGGGCTGGGACACGCAAGCTC | + |
|
Preference number: 6 (lower is better) Translates to: AGVSSPATSCST*SREIWAGTRKL Trigger: GAGCTTGCGTGTCCCAGCCCATATTTCCCTACTGCATGTAGAGCAGGAAGTTGCTGGAGATGACACTCCTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003319.6 ENSMUST00000232680.2 |
||
| CDS GCA 72 bp | CTCCAGCCACCTGAGAACTCCCTGGTAGGCTGCTGCTaGATTTTAGGAGTAAAACCAAGGCCCGCAAGAATG | + |
|
Preference number: 6 (lower is better) Translates to: LQPPENSLVGCC*ILGVKPRPARM Trigger: CATTCTTGCGGGCCTTGGTTTTACTCCTAAAATGCAGCAGCAGCCTACCAGGGAGTTCTCAGGTGGCTGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003319.6 ENSMUST00000232680.2 |
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| CDS GCA 72 bp | AAACGGTCGATGAAAACCTGGATGTGTTGGCGATACTaGTGCTGGGCCTCATACTCGCGCTGCTGGTTGAGA | + |
|
Preference number: 6 (lower is better) Translates to: KRSMKTWMCWRY*CWASYSRCWLR Trigger: TCTCAACCAGCAGCGCGAGTATGAGGCCCAGCAGCAGTATCGCCAACACATCCAGGTTTTCATCGACCGTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003319.6 ENSMUST00000231258.2 ENSMUST00000232680.2 |
||
| CDS GCA 72 bp | AGCTCGCAACAGGACGCATGGCCAGTTCTCCAGAGATaGCATACCGGCCCAATTGGTGACGATATTCCTCTT | + |
|
Preference number: 6 (lower is better) Translates to: SSQQDAWPVLQR*HTGPIGDDIPL Trigger: AAGAGGAATATCGTCACCAATTGGGCCGGTATGGCATCTCTGGAGAACTGGCCATGCGTCCTGTTGCGAGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003319.6 ENSMUST00000148679.2 |
||
| CDS CCA 72 bp | TGTTTGTGGGTTCGTCTAACAGCAGAAGGTCTGGCCTaGCAAAGAGAGCTCGGGCTAAGGCCAATCTCATCC | + |
|
Preference number: 6 (lower is better) Translates to: CLWVRLTAEGLA*QRELGLRPISS Trigger: GGATGAGATTGGCCTTAGCCCGAGCTCTCTTTGCCAGGCCAGACCTTCTGCTGTTAGACGAACCCACAAACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003319.6 ENSMUST00000232680.2 |
||
| CDS CCA 72 bp | CCAACCACAGGATGGCCCTTACATCCAGCATGTTTGTaGGTTCGTCTAACAGCAGAAGGTCTGGCCTGGCAA | + |
|
Preference number: 6 (lower is better) Translates to: PTTGWPLHPACL*VRLTAEGLAWQ Trigger: TTGCCAGGCCAGACCTTCTGCTGTTAGACGAACCCACAAACATGCTGGATGTAAGGGCCATCCTGTGGTTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003319.6 ENSMUST00000232680.2 |
||
| CDS CAA 72 bp | TCTCCAACCACAGGATGGCCCTTACATCCAGCATGTTaGTGGGTTCGTCTAACAGCAGAAGGTCTGGCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: SPTTGWPLHPAC*WVRLTAEGLAW Trigger: CCAGGCCAGACCTTCTGCTGTTAGACGAACCCACAAACATGCTGGATGTAAGGGCCATCCTGTGGTTGGAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003319.6 ENSMUST00000232680.2 |
||
| CDS GCA 72 bp | CTCTGCAAGGCAGGAGTGTCATCTCCAGCAACTTCCTaGTCTACATGCAGTAGGGAAATATGGGCTGGGACA | + |
|
Preference number: 6 (lower is better) Translates to: LCKAGVSSPATS*STCSREIWAGT Trigger: TGTCCCAGCCCATATTTCCCTACTGCATGTAGAGCAGGAAGTTGCTGGAGATGACACTCCTGCCTTGCAGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003319.6 ENSMUST00000232680.2 |
||
| CDS CCA 72 bp | AGGGCCACGTCTGCAGGTAATTCTCCAACCACAGGATaGCCCTTACATCCAGCATGTTTGTGGGTTCGTCTA | + |
|
Preference number: 6 (lower is better) Translates to: RATSAGNSPTTG*PLHPACLWVRL Trigger: TAGACGAACCCACAAACATGCTGGATGTAAGGGCCATCCTGTGGTTGGAGAATTACCTGCAGACGTGGCCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003319.6 ENSMUST00000231258.2 ENSMUST00000232680.2 |
||
| CDS CAA 72 bp | AGAAGAGCAGGCAAGGACATGCTCACCCTGAAGTTGTaGAGAGCCTGGCCCAAAGCTTCAATGGTCTCCATG | + |
|
Preference number: 6 (lower is better) Translates to: RRAGKDMLTLKL*RAWPKASMVSM Trigger: CATGGAGACCATTGAAGCTTTGGGCCAGGCTCTCAACAACTTCAGGGTGAGCATGTCCTTGCCTGCTCTTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148679.2 |
||
| CDS CAA 90 bp | GCAGGTAATTCTCCAACCACAGGATGGCCCTTACATCCAGCATGTTaGTGGGTTCGTCTAACAGCAGAAGGTCTGGCCTGGCAAAGAGAG | + |
|
Preference number: 6 (lower is better) Translates to: AGNSPTTGWPLHPAC*WVRLTAEGLAWQRE Trigger: CTCTCTTTGCCAGGCCAGACCTTCTGCTGTTAGACGAACCCACAAACATGCTGGATGTAAGGGCCATCCTGTGGTTGGAGAATTACCTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003319.6 ENSMUST00000232680.2 |
||
| CDS CCA 72 bp | TTACATCTGCTCCAGCCAGCAGTACCAGAGGGTTGCTaGTCTTCAGTGTTTCCTTCTCTGAACGCTTCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: LHLLQPAVPEGC*SSVFPSLNASP Trigger: AGGAGAAGCGTTCAGAGAAGGAAACACTGAAGACCAGCAACCCTCTGGTACTGCTGGCTGGAGCAGATGTAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232490.2 |
||
| CDS TCA 72 bp | GCCAGTTCTCCAGAGATGCCATACCGGCCCAATTGGTaGCGATATTCCTCTTCAGGTAGCCCAGGAAATTTT | + |
|
Preference number: 6 (lower is better) Translates to: ASSPEMPYRPNW*RYSSSGSPGNF Trigger: AAAATTTCCTGGGCTACCTGAAGAGGAATATCGTCACCAATTGGGCCGGTATGGCATCTCTGGAGAACTGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003319.6 ENSMUST00000148679.2 |
||
| CDS TCA 72 bp | AGCTCCTTGCACACCAGTCGGATGAAGCGCTCATCATaGGATACCAGAATTACACCACCCCTGAAGTTGTTG | + |
|
Preference number: 6 (lower is better) Translates to: SSLHTSRMKRSS*DTRITPPLKLL Trigger: CAACAACTTCAGGGGTGGTGTAATTCTGGTATCTCATGATGAGCGCTTCATCCGACTGGTGTGCAAGGAGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003319.6 |
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| CDS CAA 72 bp | AATCCATCGGGGAACTTCAACACCACCTCGGATTCCTaGTCCACCGGTTTTAGTTCAGGTAGCTTCTCCAAC | + |
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Preference number: 6 (lower is better) Translates to: NPSGNFNTTSDS*STGFSSGSFSN Trigger: GTTGGAGAAGCTACCTGAACTAAAACCGGTGGACAAGGAATCCGAGGTGGTGTTGAAGTTCCCCGATGGATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000003319.6 ENSMUST00000231258.2 ENSMUST00000232680.2 |
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| CDS TCA 72 bp | CATTTTAGGAGTAAAACCAAGGCCCGCAAGAATGACTaGTGCTCTGGCAGGTGCCTTATCTGCCTCAATCTC | + |
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Preference number: 6 (lower is better) Translates to: HFRSKTKARKND*CSGRCLICLNL Trigger: GAGATTGAGGCAGATAAGGCACCTGCCAGAGCATCAGTCATTCTTGCGGGCCTTGGTTTTACTCCTAAAATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003319.6 ENSMUST00000232680.2 |
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| CDS CCA 72 bp | CTGTTTGCATTGTATCGAAAACGGTCGATGAAAACCTaGATGTGTTGGCGATACTGCTGCTGGGCCTCATAC | + |
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Preference number: 6 (lower is better) Translates to: LFALYRKRSMKT*MCWRYCCWASY Trigger: GTATGAGGCCCAGCAGCAGTATCGCCAACACATCCAGGTTTTCATCGACCGTTTTCGATACAATGCAAACAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000003319.6 ENSMUST00000231258.2 ENSMUST00000232680.2 |
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| CDS CAA 90 bp | GGTTGCTGGTCTTCAGTGTTTCCTTCTCTGAACGCTTCTCCTGCTTaGCCTTCAGTCGAGCTTCAGCCTTCTCTAGTTTCTTCGCATTTA | + |
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Preference number: 6 (lower is better) Translates to: GCWSSVFPSLNASPA*PSVELQPSLVSSHL Trigger: TAAATGCGAAGAAACTAGAGAAGGCTGAAGCTCGACTGAAGGCAAAGCAGGAGAAGCGTTCAGAGAAGGAAACACTGAAGACCAGCAACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003319.6 ENSMUST00000232490.2 ENSMUST00000232680.2 |
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| CDS TCA 72 bp | CTCAATTCGCACATCATAGGACTTGTTCTTGCCAGATaGTTCCAATCGACTCTCTTTTCTGCTGCCTGCCTG | + |
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Preference number: 6 (lower is better) Translates to: LNSHIIGLVLAR*FQSTLFSAACL Trigger: CAGGCAGGCAGCAGAAAAGAGAGTCGATTGGAATCATCTGGCAAGAACAAGTCCTATGATGTGCGAATTGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003319.6 ENSMUST00000232680.2 |
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| CDS CCA 72 bp | GATCATAGTAGAAATCCACCTCATCTAGCTGCAGAATaGGCGGTGAGAACTTCTCAAATCCATCGGGGAACT | + |
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Preference number: 6 (lower is better) Translates to: DHSRNPPHLAAE*AVRTSQIHRGT Trigger: AGTTCCCCGATGGATTTGAGAAGTTCTCACCGCCCATTCTGCAGCTAGATGAGGTGGATTTCTACTATGATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003319.6 ENSMUST00000232680.2 |
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| CDS CAA 72 bp | TCTTCAGTGTTTCCTTCTCTGAACGCTTCTCCTGCTTaGCCTTCAGTCGAGCTTCAGCCTTCTCTAGTTTCT | + |
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Preference number: 6 (lower is better) Translates to: SSVFPSLNASPA*PSVELQPSLVS Trigger: AGAAACTAGAGAAGGCTGAAGCTCGACTGAAGGCAAAGCAGGAGAAGCGTTCAGAGAAGGAAACACTGAAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003319.6 ENSMUST00000232490.2 ENSMUST00000232680.2 |
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| CDS CCA 72 bp | TCGAGGACTGTTCCCTCTTTAGCAGTCCTGGAAGTTTaGTGTCACAGTCATAGTTTTCCATTATCTTCGACA | + |
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Preference number: 6 (lower is better) Translates to: SRTVPSLAVLEV*CHSHSFPLSST Trigger: TGTCGAAGATAATGGAAAACTATGACTGTGACACCAAACTTCCAGGACTGCTAAAGAGGGAACAGTCCTCGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003319.6 ENSMUST00000232490.2 ENSMUST00000232680.2 |
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| CDS GCA 72 bp | CATCTTCAGTTTACTCTGCACTTGAGAGGCTCTGTTTaGATTGTATCGAAAACGGTCGATGAAAACCTGGAT | + |
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Preference number: 6 (lower is better) Translates to: HLQFTLHLRGSV*IVSKTVDENLD Trigger: ATCCAGGTTTTCATCGACCGTTTTCGATACAATGCAAACAGAGCCTCTCAAGTGCAGAGTAAACTGAAGATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000003319.6 ENSMUST00000231258.2 ENSMUST00000232680.2 |
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