Pregenerated sensors for ABCF2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028953Ensembl transcript IDs: ENSMUST00000030795.10
Found 41 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | GCTTGGGCCCTTGGGTTAACCCAGGTACCCCTGGCTGCATCTTTCAGGGCAAGGGCAGCAGTGCAGGAGTaGAGCCCCAGGGTCCTGTCC | + |
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Preference number: 2 (lower is better) Translates to: AWALGLTQVPLAASFRARAAVQE*SPRVLS Trigger: GGACAGGACCCTGGGGCTGCACTCCTGCACTGCTGC...CCTTGCCCTGAAAGATGCAGCCAGGGGTACCTGGGTTAACCCAAGGGCCCAAGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030795.10 |
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| 3UTR-3UTR TCA 90 bp | ACAGACAGACCCAAATGGAAGGAGGGTGGGAAAACGGACAGGTGCTGTCCAGCTGCTGAGGGGAGAGGCTaGGGGCAGTATTGCAGCAGT | + |
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Preference number: 2 (lower is better) Translates to: TDRPKWKEGGKTDRCCPAAEGRG*GQYCSS Trigger: ACTGCTGCAATACTGCCCTCAGCCTCTCCCCTCAGC...AGCTGGACAGCACCTGTCCGTTTTCCCACCCTCCTTCCATTTGGGTCTGTCTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030795.10 |
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| 3UTR-3UTR CCA 90 bp | ACGGGGTTGATGGGCTGGCAGTATTTCTCCAACATCACCGAAACCCATAAAATGCAAATGGAAGGAGGGTaGGAAAACGGACAGGTGCTG | + |
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Preference number: 2 (lower is better) Translates to: TGLMGWQYFSNITETHKMQMEGG*ENGQVL Trigger: CAGCACCTGTCCGTTTTCCCACCCTCCTTCCATTTG...CATTTTATGGGTTTCGGTGATGTTGGAGAAATACTGCCAGCCCATCAACCCCGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030795.10 |
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| 3UTR-3UTR CCA 90 bp | ACGGGGTTGATGGGCTGGCAGTATTTCTCCAACATCACCGAAACCCATAAAATGACAGACAGACCCAAATaGAAGGAGGGTGGGAAAACG | + |
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Preference number: 2 (lower is better) Translates to: TGLMGWQYFSNITETHKMTDRPK*KEGGKT Trigger: CGTTTTCCCACCCTCCTTCCATTTGGGTCTGTCTGT...CATTTTATGGGTTTCGGTGATGTTGGAGAAATACTGCCAGCCCATCAACCCCGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030795.10 |
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| 3UTR-3UTR CAA 90 bp | GCTTGGGCCCTTGGGTTAACCCAGGTACCCCTGGCTGCATCTTTCAGGGCAAGGAGGCTGAGGGCAGTATaGCAGCAGTGCAGGAGTGCA | + |
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Preference number: 3 (lower is better) Translates to: AWALGLTQVPLAASFRARRLRAV*QQCRSA Trigger: TGCACTCCTGCACTGCTGCAATACTGCCCTCAGCCT...CCTTGCCCTGAAAGATGCAGCCAGGGGTACCTGGGTTAACCCAAGGGCCCAAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030795.10 |
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| 3UTR-3UTR CAA 90 bp | ACGGGGTTGATGGGCTGGCAGTATTTCTCCAACATCACCGAAACCCATAAAATGGGGCCAGACCAGGGCTaGGGCCCTTGGGTTAACCCA | + |
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Preference number: 3 (lower is better) Translates to: TGLMGWQYFSNITETHKMGPDQG*GPWVNP Trigger: TGGGTTAACCCAAGGGCCCAAGCCCTGGTCTGGCCC...CATTTTATGGGTTTCGGTGATGTTGGAGAAATACTGCCAGCCCATCAACCCCGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030795.10 |
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| 3UTR GCA 72 bp | AGACCCAAATGGAAGGAGGGTGGGAAAACGGACAGGTaGTGTCCAGCTGGAGATATGATGCAGCGAAGGCAG | + |
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Preference number: 3 (lower is better) Translates to: RPKWKEGGKTDR*CPAGDMMQRRQ Trigger: CTGCCTTCGCTGCATCATATCTCCAGCTGGACAGCACCTGTCCGTTTTCCCACCCTCCTTCCATTTGGGTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030795.10 |
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| CDS-3UTR GCA 90 bp | GCTTGGGCCCTTGGGTTAACCCAGGTACCCCTGGCTGCATCTTTCAGGGCAAGGCACACTCGGCACTTCTaGCCATCCGACAGGTTCCGG | + |
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Preference number: 4 (lower is better) Translates to: AWALGLTQVPLAASFRARHTRHF*PSDRFR Trigger: CCGGAACCTGTCGGATGGGCAGAAGTGCCGAGTGTG...CCTTGCCCTGAAAGATGCAGCCAGGGGTACCTGGGTTAACCCAAGGGCCCAAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030795.10 |
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| CDS-3UTR TCA 90 bp | CCTGTCCTGAGTGGCTGGTCAGGTGTCAGCTGGCAGTCTCCAGGTGGCATTCCTTTCCATTTAAGCCAATaGGGCCATAGCGCCGGCCTG | + |
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Preference number: 4 (lower is better) Translates to: PVLSGWSGVSWQSPGGIPFHLSQ*GHSAGL Trigger: CAGGCCGGCGCTATGGCCTCATTGGCTTAAATGGAA...AGGAATGCCACCTGGAGACTGCCAGCTGACACCTGACCAGCCACTCAGGACAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030795.10 |
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| CDS-3UTR TCA 90 bp | CCTGTCCTGAGTGGCTGGTCAGGTGTCAGCTGGCAGTCTCCAGGTGGCATTCCTTCCGCCAGCCACCACTaGAGTCTTTCAGCTTCTTGC | + |
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Preference number: 4 (lower is better) Translates to: PVLSGWSGVSWQSPGGIPSASHH*SLSASC Trigger: GCAAGAAGCTGAAAGACTTCAGTGGTGGCTGGCGGA...AGGAATGCCACCTGGAGACTGCCAGCTGACACCTGACCAGCCACTCAGGACAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030795.10 |
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| CDS-3UTR CCA 90 bp | GCTTGGGCCCTTGGGTTAACCCAGGTACCCCTGGCTGCATCTTTCAGGGCAAGGGTTTTCTCTTTGCTTTaGGCCTGCCGGGCCAGCTTG | + |
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Preference number: 4 (lower is better) Translates to: AWALGLTQVPLAASFRARVFSLL*ACRASL Trigger: CAAGCTGGCCCGGCAGGCCCAAAGCAAAGAGAAAAC...CCTTGCCCTGAAAGATGCAGCCAGGGGTACCTGGGTTAACCCAAGGGCCCAAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030795.10 |
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| CDS-3UTR GCA 90 bp | CCTGTCCTGAGTGGCTGGTCAGGTGTCAGCTGGCAGTCTCCAGGTGGCATTCCTGTAGTGTTTTCTCTTTaGTTTGGGCCTGCCGGGCCA | + |
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Preference number: 4 (lower is better) Translates to: PVLSGWSGVSWQSPGGIPVVFSL*FGPAGP Trigger: TGGCCCGGCAGGCCCAAAGCAAAGAGAAAACACTAC...AGGAATGCCACCTGGAGACTGCCAGCTGACACCTGACCAGCCACTCAGGACAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030795.10 |
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| CDS-3UTR GCA 90 bp | ACAGACAGACCCAAATGGAAGGAGGGTGGGAAAACGGACAGGTGCTGTCCAGCTCGGATTGGGCTCACCTaGTGTTTCCCAGTGAGGCCG | + |
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Preference number: 4 (lower is better) Translates to: TDRPKWKEGGKTDRCCPARIGLT*CFPVRP Trigger: CGGCCTCACTGGGAAACAGCAGGTGAGCCCAATCCG...AGCTGGACAGCACCTGTCCGTTTTCCCACCCTCCTTCCATTTGGGTCTGTCTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030795.10 |
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| CDS-3UTR CCA 90 bp | CCTGTCCTGAGTGGCTGGTCAGGTGTCAGCTGGCAGTCTCCAGGTGGCATTCCTCTTCTCCATCTCCTGTaGTCTCTCTGCCATTGGCCT | + |
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Preference number: 4 (lower is better) Translates to: PVLSGWSGVSWQSPGGIPLLHLL*SLCHWP Trigger: AGGCCAATGGCAGAGAGACCACAGGAGATGGAGAAG...AGGAATGCCACCTGGAGACTGCCAGCTGACACCTGACCAGCCACTCAGGACAGG 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030795.10 |
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| CDS-3UTR CCA 90 bp | CCTGTCCTGAGTGGCTGGTCAGGTGTCAGCTGGCAGTCTCCAGGTGGCATTCCTCGATGTGCTCTGGGATaGGCACTTCACGTTTCCCAA | + |
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Preference number: 4 (lower is better) Translates to: PVLSGWSGVSWQSPGGIPRCALG*ALHVSQ Trigger: TTGGGAAACGTGAAGTGCCCATCCCAGAGCACATCG...AGGAATGCCACCTGGAGACTGCCAGCTGACACCTGACCAGCCACTCAGGACAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030795.10 |
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| CDS-3UTR GCA 90 bp | GCTTGGGCCCTTGGGTTAACCCAGGTACCCCTGGCTGCATCTTTCAGGGCAAGGGTAGTTCTTCATGTGTaGGATCTGGTCCTGCTCCCA | + |
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Preference number: 4 (lower is better) Translates to: AWALGLTQVPLAASFRARVVLHV*DLVLLP Trigger: TGGGAGCAGGACCAGATCGCACACATGAAGAACTAC...CCTTGCCCTGAAAGATGCAGCCAGGGGTACCTGGGTTAACCCAAGGGCCCAAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030795.10 |
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| CDS-3UTR GCA 90 bp | CCTGTCCTGAGTGGCTGGTCAGGTGTCAGCTGGCAGTCTCCAGGTGGCATTCCTCTCGATTTTCTCTTCTaGCACCTGAGGTTCTGTGAC | + |
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Preference number: 4 (lower is better) Translates to: PVLSGWSGVSWQSPGGIPLDFLF*HLRFCD Trigger: GTCACAGAACCTCAGGTGGCAGAAGAGAAAATCGAG...AGGAATGCCACCTGGAGACTGCCAGCTGACACCTGACCAGCCACTCAGGACAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030795.10 |
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| CDS-3UTR CCA 90 bp | CCTGTCCTGAGTGGCTGGTCAGGTGTCAGCTGGCAGTCTCCAGGTGGCATTCCTTGGTCTCTCTGCCATTaGCCTCCTCGATTTTCTCTT | + |
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Preference number: 4 (lower is better) Translates to: PVLSGWSGVSWQSPGGIPWSLCH*PPRFSL Trigger: AAGAGAAAATCGAGGAGGCCAATGGCAGAGAGACCA...AGGAATGCCACCTGGAGACTGCCAGCTGACACCTGACCAGCCACTCAGGACAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030795.10 |
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| CDS-3UTR CCA 90 bp | ACAGACAGACCCAAATGGAAGGAGGGTGGGAAAACGGACAGGTGCTGTCCAGCTCCATTCAGGAAGTCCTaGGAATGGGACACCAGGACC | + |
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Preference number: 4 (lower is better) Translates to: TDRPKWKEGGKTDRCCPAPFRKS*EWDTRT Trigger: GGTCCTGGTGTCCCATTCCCAGGACTTCCTGAATGG...AGCTGGACAGCACCTGTCCGTTTTCCCACCCTCCTTCCATTTGGGTCTGTCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030795.10 |
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| CDS-3UTR TCA 90 bp | ACAGACAGACCCAAATGGAAGGAGGGTGGGAAAACGGACAGGTGCTGTCCAGCTGGCCGTATCTCCCAATaGTCTTCCTCATCTCCTCCT | + |
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Preference number: 4 (lower is better) Translates to: TDRPKWKEGGKTDRCCPAGRISQ*SSSSPP Trigger: AGGAGGAGATGAGGAAGATCATTGGGAGATACGGCC...AGCTGGACAGCACCTGTCCGTTTTCCCACCCTCCTTCCATTTGGGTCTGTCTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030795.10 |
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| CDS-3UTR GCA 90 bp | ACAGACAGACCCAAATGGAAGGAGGGTGGGAAAACGGACAGGTGCTGTCCAGCTTTCAGCTTCTTGCGCTaGATAGCAGGTGTGAAGCCC | + |
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Preference number: 4 (lower is better) Translates to: TDRPKWKEGGKTDRCCPAFSFLR*IAGVKP Trigger: GGGCTTCACACCTGCTATGCAGCGCAAGAAGCTGAA...AGCTGGACAGCACCTGTCCGTTTTCCCACCCTCCTTCCATTTGGGTCTGTCTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030795.10 |
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| CDS-3UTR GCA 90 bp | ACAGACAGACCCAAATGGAAGGAGGGTGGGAAAACGGACAGGTGCTGTCCAGCTGACCCAAATCTCCTGTaGAACCTGCTGGATGAGTCT | + |
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Preference number: 4 (lower is better) Translates to: TDRPKWKEGGKTDRCCPADPNLL*NLLDES Trigger: AGACTCATCCAGCAGGTTGCACAGGAGATTTGGGTC...AGCTGGACAGCACCTGTCCGTTTTCCCACCCTCCTTCCATTTGGGTCTGTCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030795.10 |
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| CDS-3UTR TCA 90 bp | ACGGGGTTGATGGGCTGGCAGTATTTCTCCAACATCACCGAAACCCATAAAATGTCAGTACTGTTGGGGTaGGAAGCCAGGACACCGGTG | + |
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Preference number: 4 (lower is better) Translates to: TGLMGWQYFSNITETHKMSVLLG*EARTPV Trigger: CACCGGTGTCCTGGCTTCTCACCCCAACAGTACTGA...CATTTTATGGGTTTCGGTGATGTTGGAGAAATACTGCCAGCCCATCAACCCCGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030795.10 |
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| CDS-3UTR TCA 90 bp | ACAGACAGACCCAAATGGAAGGAGGGTGGGAAAACGGACAGGTGCTGTCCAGCTCGGTGGGAAATAAAATaGCAGCGTCTTGTCACTCAC | + |
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Preference number: 4 (lower is better) Translates to: TDRPKWKEGGKTDRCCPARWEIK*QRLVTH Trigger: GTGAGTGACAAGACGCTGTCATTTTATTTCCCACCG...AGCTGGACAGCACCTGTCCGTTTTCCCACCCTCCTTCCATTTGGGTCTGTCTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030795.10 |
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| CDS-3UTR TCA 90 bp | ACGGGGTTGATGGGCTGGCAGTATTTCTCCAACATCACCGAAACCCATAAAATGGTCTCGATGTCCAGGTaGTTGGTAGGCTCGTCCAGA | + |
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Preference number: 4 (lower is better) Translates to: TGLMGWQYFSNITETHKMVSMSR*LVGSSR Trigger: TCTGGACGAGCCTACCAATCACCTGGACATCGAGAC...CATTTTATGGGTTTCGGTGATGTTGGAGAAATACTGCCAGCCCATCAACCCCGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030795.10 |
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| CDS-3UTR GCA 90 bp | ACGGGGTTGATGGGCTGGCAGTATTTCTCCAACATCACCGAAACCCATAAAATGCAGAGTGGACTTCCCTaGTCCATTGGGTCCTACCAG | + |
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Preference number: 4 (lower is better) Translates to: TGLMGWQYFSNITETHKMQSGLP*SIGSYQ Trigger: CTGGTAGGACCCAATGGAGCAGGGAAGTCCACTCTG...CATTTTATGGGTTTCGGTGATGTTGGAGAAATACTGCCAGCCCATCAACCCCGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030795.10 |
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| CDS-3UTR CCA 90 bp | ACGGGGTTGATGGGCTGGCAGTATTTCTCCAACATCACCGAAACCCATAAAATGCTTCATGTCCCTTTCTaGGTCGCTGTCGGGCTTTGG | + |
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Preference number: 4 (lower is better) Translates to: TGLMGWQYFSNITETHKMLHVPF*VAVGLW Trigger: CCAAAGCCCGACAGCGACCCAGAAAGGGACATGAAG...CATTTTATGGGTTTCGGTGATGTTGGAGAAATACTGCCAGCCCATCAACCCCGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030795.10 |
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| CDS-3UTR CCA 90 bp | ACGGGGTTGATGGGCTGGCAGTATTTCTCCAACATCACCGAAACCCATAAAATGAGGAAGTCCTGGGAATaGGACACCAGGACCAGGATG | + |
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Preference number: 4 (lower is better) Translates to: TGLMGWQYFSNITETHKMRKSWE*DTRTRM Trigger: CATCCTGGTCCTGGTGTCCCATTCCCAGGACTTCCT...CATTTTATGGGTTTCGGTGATGTTGGAGAAATACTGCCAGCCCATCAACCCCGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030795.10 |
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| CDS-3UTR GCA 90 bp | ACGGGGTTGATGGGCTGGCAGTATTTCTCCAACATCACCGAAACCCATAAAATGCTCCTGTGGTCTCTCTaGCATTGGCCTCCTCGATTT | + |
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Preference number: 4 (lower is better) Translates to: TGLMGWQYFSNITETHKMLLWSL*HWPPRF Trigger: AAATCGAGGAGGCCAATGGCAGAGAGACCACAGGAG...CATTTTATGGGTTTCGGTGATGTTGGAGAAATACTGCCAGCCCATCAACCCCGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030795.10 |
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| CDS-3UTR CCA 90 bp | ACGGGGTTGATGGGCTGGCAGTATTTCTCCAACATCACCGAAACCCATAAAATGGGACATCAGTACTGTTaGGGTGAGAAGCCAGGACAC | + |
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Preference number: 4 (lower is better) Translates to: TGLMGWQYFSNITETHKMGHQYC*GEKPGH Trigger: GTGTCCTGGCTTCTCACCCCAACAGTACTGATGTCC...CATTTTATGGGTTTCGGTGATGTTGGAGAAATACTGCCAGCCCATCAACCCCGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030795.10 |
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| CDS-3UTR TCA 90 bp | ACGGGGTTGATGGGCTGGCAGTATTTCTCCAACATCACCGAAACCCATAAAATGGTTCATAGAGCTCCATaGGCTTTTCACACTCCGCAT | + |
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Preference number: 4 (lower is better) Translates to: TGLMGWQYFSNITETHKMVHRAP*AFHTPH Trigger: ATGCGGAGTGTGAAAAGCTCATGGAGCTCTATGAAC...CATTTTATGGGTTTCGGTGATGTTGGAGAAATACTGCCAGCCCATCAACCCCGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030795.10 |
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| CDS-3UTR GCA 90 bp | ACGGGGTTGATGGGCTGGCAGTATTTCTCCAACATCACCGAAACCCATAAAATGATCTCCTGTGCAACCTaGTGGATGAGTCTGAAGTCA | + |
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Preference number: 4 (lower is better) Translates to: TGLMGWQYFSNITETHKMISCAT*WMSLKS Trigger: TGACTTCAGACTCATCCAGCAGGTTGCACAGGAGAT...CATTTTATGGGTTTCGGTGATGTTGGAGAAATACTGCCAGCCCATCAACCCCGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030795.10 |
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| CDS-3UTR CAA 90 bp | CCTGTCCTGAGTGGCTGGTCAGGTGTCAGCTGGCAGTCTCCAGGTGGCATTCCTCCGACAGGTTCCGGATaGGGCTCACCTGCTGTTTCC | + |
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Preference number: 5 (lower is better) Translates to: PVLSGWSGVSWQSPGGIPPTGSG*GSPAVS Trigger: GGAAACAGCAGGTGAGCCCAATCCGGAACCTGTCGG...AGGAATGCCACCTGGAGACTGCCAGCTGACACCTGACCAGCCACTCAGGACAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030795.10 |
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| CDS-3UTR CAA 90 bp | CCTGTCCTGAGTGGCTGGTCAGGTGTCAGCTGGCAGTCTCCAGGTGGCATTCCTTGTTTTCTCTTTGCTTaGGGCCTGCCGGGCCAGCTT | + |
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Preference number: 5 (lower is better) Translates to: PVLSGWSGVSWQSPGGIPCFLFA*GLPGQL Trigger: AAGCTGGCCCGGCAGGCCCAAAGCAAAGAGAAAACA...AGGAATGCCACCTGGAGACTGCCAGCTGACACCTGACCAGCCACTCAGGACAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030795.10 |
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| CDS-3UTR CAA 90 bp | CCTGTCCTGAGTGGCTGGTCAGGTGTCAGCTGGCAGTCTCCAGGTGGCATTCCTGTCGCTGAGCAGCTCTaGACCATGAAAGGTAAGGGA | + |
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Preference number: 5 (lower is better) Translates to: PVLSGWSGVSWQSPGGIPVAEQL*TMKGKG Trigger: TCCCTTACCTTTCATGGTCAAGAGCTGCTCAGCGAC...AGGAATGCCACCTGGAGACTGCCAGCTGACACCTGACCAGCCACTCAGGACAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030795.10 |
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| CDS-3UTR CAA 90 bp | CCTGTCCTGAGTGGCTGGTCAGGTGTCAGCTGGCAGTCTCCAGGTGGCATTCCTGAGTTTAATTCCAGTTaGGTGTCGCTGAGCAGCTCT | + |
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Preference number: 5 (lower is better) Translates to: PVLSGWSGVSWQSPGGIPEFNSS*VSLSSS Trigger: AGAGCTGCTCAGCGACACCAAACTGGAATTAAACTC...AGGAATGCCACCTGGAGACTGCCAGCTGACACCTGACCAGCCACTCAGGACAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030795.10 |
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| CDS-3UTR CAA 90 bp | CCTGTCCTGAGTGGCTGGTCAGGTGTCAGCTGGCAGTCTCCAGGTGGCATTCCTATCCATGTAAGATCCTaGAGGCCCTCATCTCAGCTT | + |
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Preference number: 5 (lower is better) Translates to: PVLSGWSGVSWQSPGGIPIHVRS*RPSSQL Trigger: AAGCTGAGATGAGGGCCTCAAGGATCTTACATGGAT...AGGAATGCCACCTGGAGACTGCCAGCTGACACCTGACCAGCCACTCAGGACAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030795.10 |
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| CDS-3UTR CAA 90 bp | CCTGTCCTGAGTGGCTGGTCAGGTGTCAGCTGGCAGTCTCCAGGTGGCATTCCTCCGTCTTTCGTATATTaGAAGCTCACGTTCTGCACC | + |
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Preference number: 5 (lower is better) Translates to: PVLSGWSGVSWQSPGGIPPSFVY*KLTFCT Trigger: GGTGCAGAACGTGAGCTTCAAATATACGAAAGACGG...AGGAATGCCACCTGGAGACTGCCAGCTGACACCTGACCAGCCACTCAGGACAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030795.10 |
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| CDS-3UTR CAA 90 bp | ACGGGGTTGATGGGCTGGCAGTATTTCTCCAACATCACCGAAACCCATAAAATGTGTAGTGTTTTCTCTTaGCTTTGGGCCTGCCGGGCC | + |
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Preference number: 5 (lower is better) Translates to: TGLMGWQYFSNITETHKMCSVFS*LWACRA Trigger: GGCCCGGCAGGCCCAAAGCAAAGAGAAAACACTACA...CATTTTATGGGTTTCGGTGATGTTGGAGAAATACTGCCAGCCCATCAACCCCGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030795.10 |
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| CDS-3UTR CAA 90 bp | ACGGGGTTGATGGGCTGGCAGTATTTCTCCAACATCACCGAAACCCATAAAATGGTGGTCTCTCTGCCATaGGCCTCCTCGATTTTCTCT | + |
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Preference number: 5 (lower is better) Translates to: TGLMGWQYFSNITETHKMVVSLP*ASSIFS Trigger: AGAGAAAATCGAGGAGGCCAATGGCAGAGAGACCAC...CATTTTATGGGTTTCGGTGATGTTGGAGAAATACTGCCAGCCCATCAACCCCGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030795.10 |
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| CDS GCA 72 bp | TCAGCAAATCTACTTCTCCATCTCCTGTGGTCTCTCTaGCATTGGCCTCCTCGATTTTCTCTTCTGCCACCT | + |
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Preference number: 6 (lower is better) Translates to: SANLLLHLLWSL*HWPPRFSLLPP Trigger: AGGTGGCAGAAGAGAAAATCGAGGAGGCCAATGGCAGAGAGACCACAGGAGATGGAGAAGTAGATTTGCTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030795.10 |
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