Pregenerated sensors for ABCF1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000038762Ensembl transcript IDs: ENSMUST00000043757.15, ENSMUST00000172661.2
Found 171 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CGCCACCTTCATGGCCTATGTGGCTGCTGCAGCTGGCAGCAGCCATaGCAGGCTTCTAGGTGGATGAGGGGAGACGGCCTAGACTCCAGC | + |
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Preference number: 1 (lower is better) Translates to: RHLHGLCGCCSWQQP*QASRWMRGDGLDSS Trigger: GCTGGAGTCTAGGCCGTCTCCCCTCATCCACCTAGAAGCCTGCCATGGCTGCTGCCAGCTGCAGCAGCCACATAGGCCATGAAGGTGGCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043757.15 |
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| 3UTR CCA 90 bp | CTATGTGGCTGCTGCAGCTGGCAGCAGCCATGGCAGGCTTCTAGGTaGATGAGGGGAGACGGCCTAGACTCCAGCCGTAGGAGCTGGTTG | + |
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Preference number: 1 (lower is better) Translates to: LCGCCSWQQPWQASR*MRGDGLDSSRRSWL Trigger: CAACCAGCTCCTACGGCTGGAGTCTAGGCCGTCTCCCCTCATCCACCTAGAAGCCTGCCATGGCTGCTGCCAGCTGCAGCAGCCACATAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043757.15 |
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| 3UTR CCA 90 bp | ACGGATGGATGCTCTCACACACATCAAGGCAACACGCCACCTTCATaGCCTATGTGGCTGCTGCAGCTGGCAGCAGCCATGGCAGGCTTC | + |
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Preference number: 1 (lower is better) Translates to: TDGCSHTHQGNTPPS*PMWLLQLAAAMAGF Trigger: GAAGCCTGCCATGGCTGCTGCCAGCTGCAGCAGCCACATAGGCCATGAAGGTGGCGTGTTGCCTTGATGTGTGTGAGAGCATCCATCCGT 59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043757.15 |
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| 3UTR TCA 90 bp | CTCAAGTCCCCACGAGACAAGGGACCACAGGCACCAGATCTTTGGTaGAACAGTCCAGGTCTCAGACACTTGCCTCCAGCCCTGAGGTTC | + |
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Preference number: 1 (lower is better) Translates to: LKSPRDKGPQAPDLW*NSPGLRHLPPALRF Trigger: GAACCTCAGGGCTGGAGGCAAGTGTCTGAGACCTGGACTGTTTCACCAAAGATCTGGTGCCTGTGGTCCCTTGTCTCGTGGGGACTTGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043757.15 |
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| 3UTR GCA 90 bp | GGAACACAGTCCTTCATTGAGAAGGACACAATCCACACGGATGGATaGTCTCACACACATCAAGGCAACACGCCACCTTCATGGCCTATG | + |
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Preference number: 1 (lower is better) Translates to: GTQSFIEKDTIHTDG*SHTHQGNTPPSWPM Trigger: CATAGGCCATGAAGGTGGCGTGTTGCCTTGATGTGTGTGAGAGCATCCATCCGTGTGGATTGTGTCCTTCTCAATGAAGGACTGTGTTCC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043757.15 |
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| 3UTR-3UTR CCA 90 bp | TGCAGCTGGCAGCAGCCATGGCAGGCTTCTAGGTGGATGAGGGGAGACGGCCTATCCAGCCATAGGAGCTaGTTGCAGCAGCTTCCAGGA | + |
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Preference number: 2 (lower is better) Translates to: CSWQQPWQASRWMRGDGLSSHRS*LQQLPG Trigger: TCCTGGAAGCTGCTGCAACCAGCTCCTATGGCTGGA...TAGGCCGTCTCCCCTCATCCACCTAGAAGCCTGCCATGGCTGCTGCCAGCTGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043757.15 |
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| 3UTR-3UTR GCA 90 bp | GTGAAACAGTCCAGGTCTCAGACACTTGCCTCCAGCCCTGAGGTTCTGGCTGTTGGCCTATGTGGCTGCTaGAGCTGGCAGCAGCCATGG | + |
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Preference number: 2 (lower is better) Translates to: VKQSRSQTLASSPEVLAVGLCGC*SWQQPW Trigger: CCATGGCTGCTGCCAGCTGCAGCAGCCACATAGGCC...AACAGCCAGAACCTCAGGGCTGGAGGCAAGTGTCTGAGACCTGGACTGTTTCAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043757.15 |
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| 3UTR-3UTR GCA 90 bp | GCTCTCACACACATCAAGGCAACACGCCACCTTCATGGCCTATGTGGCTGCTGCGCCATAGGAGCTGGTTaGAGCAGCTTCCAGGAGGGA | + |
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Preference number: 2 (lower is better) Translates to: ALTHIKATRHLHGLCGCCAIGAG*SSFQEG Trigger: TCCCTCCTGGAAGCTGCTGCAACCAGCTCCTATGGC...GCAGCAGCCACATAGGCCATGAAGGTGGCGTGTTGCCTTGATGTGTGTGAGAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043757.15 |
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| 3UTR-3UTR CCA 90 bp | CACAGGCACCAGATCTTTGGTGAAACAGTCCAGGTCTCAGACACTTGCCTCCAGTGTGGCTGCTGCAGCTaGCAGCAGCCATGGCAGGCT | + |
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Preference number: 2 (lower is better) Translates to: HRHQIFGETVQVSDTCLQCGCCS*QQPWQA Trigger: AGCCTGCCATGGCTGCTGCCAGCTGCAGCAGCCACA...CTGGAGGCAAGTGTCTGAGACCTGGACTGTTTCACCAAAGATCTGGTGCCTGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043757.15 |
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| 3UTR-3UTR CCA 90 bp | CTTTCCTGCCCTCAAGTCCCCACGAGACAAGGGACCACAGGCACCAGATCTTTGGAGACTGAGCCAGTGTaGGCAAGCCAGCTCAGTTAC | + |
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Preference number: 2 (lower is better) Translates to: LSCPQVPTRQGTTGTRSLETEPV*ASQLSY Trigger: GTAACTGAGCTGGCTTGCCCACACTGGCTCAGTCTC...CAAAGATCTGGTGCCTGTGGTCCCTTGTCTCGTGGGGACTTGAGGGCAGGAAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043757.15 |
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| 3UTR-3UTR GCA 90 bp | GTCAGTGAGTCAGTAGTACCCTTCCAAAAGGAGGGACCAGGGTCAGTTCTGAGTGCCGTAGGAGCTGGTTaGAGCAGGCTTCTAGGTGGA | + |
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Preference number: 2 (lower is better) Translates to: VSESVVPFQKEGPGSVLSAVGAG*SRLLGG Trigger: TCCACCTAGAAGCCTGCTGCAACCAGCTCCTACGGC...ACTCAGAACTGACCCTGGTCCCTCCTTTTGGAAGGGTACTACTGACTCACTGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043757.15 |
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| 3UTR-3UTR CCA 90 bp | GCTGTTTGTGTCAGTGAGTCAGTAGTACCCTTCCAAAAGGAGGGACCAGGGTCAAGCTGGCAGCAGCCATaGCAGGCTTCTAGGTGGATG | + |
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Preference number: 2 (lower is better) Translates to: AVCVSESVVPFQKEGPGSSWQQP*QASRWM Trigger: CATCCACCTAGAAGCCTGCCATGGCTGCTGCCAGCT...TGACCCTGGTCCCTCCTTTTGGAAGGGTACTACTGACTCACTGACACAAACAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043757.15 |
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| 3UTR CAA 90 bp | GTGGGCAAGCCAGCTCAGTTACCTCAAGGGGAACACAGTCCTTCATaGAGAAGGACACAATCCACACGGATGGATGCTCTCACACACATC | + |
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Preference number: 2 (lower is better) Translates to: VGKPAQLPQGEHSPS*RRTQSTRMDALTHI Trigger: GATGTGTGTGAGAGCATCCATCCGTGTGGATTGTGTCCTTCTCAATGAAGGACTGTGTTCCCCTTGAGGTAACTGAGCTGGCTTGCCCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043757.15 |
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| 3UTR CCA 72 bp | TGCTGCAGCTGGCAGCAGCCATGGCAGGCTTCTAGGTaGATGAGGGGAGACGGCCTAGACTCCAGCCGTAGG | + |
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Preference number: 3 (lower is better) Translates to: CCSWQQPWQASR*MRGDGLDSSRR Trigger: CCTACGGCTGGAGTCTAGGCCGTCTCCCCTCATCCACCTAGAAGCCTGCCATGGCTGCTGCCAGCTGCAGCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043757.15 |
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| 3UTR-3UTR CAA 90 bp | TGCAGCTGGCAGCAGCCATGGCAGGCTTCTAGGTGGATGAGGGGAGACGGCCTAAGCCATAGGAGCTGGTaGCAGCAGCTTCCAGGAGGG | + |
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Preference number: 3 (lower is better) Translates to: CSWQQPWQASRWMRGDGLSHRSW*QQLPGG Trigger: CCCTCCTGGAAGCTGCTGCAACCAGCTCCTATGGCT...TAGGCCGTCTCCCCTCATCCACCTAGAAGCCTGCCATGGCTGCTGCCAGCTGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043757.15 |
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| 3UTR GCA 72 bp | AAGGCAACACGCCACCTTCATGGCCTATGTGGCTGCTaGAGCTGGCAGCAGCCATGGCAGGCTTCTAGGTGG | + |
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Preference number: 3 (lower is better) Translates to: KATRHLHGLCGC*SWQQPWQASRW Trigger: CCACCTAGAAGCCTGCCATGGCTGCTGCCAGCTGCAGCAGCCACATAGGCCATGAAGGTGGCGTGTTGCCTT 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043757.15 |
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| 3UTR CCA 72 bp | ACACGCCACCTTCATGGCCTATGTGGCTGCTGCAGCTaGCAGCAGCCATGGCAGGCTTCTAGGTGGATGAGG | + |
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Preference number: 3 (lower is better) Translates to: TRHLHGLCGCCS*QQPWQASRWMR Trigger: CCTCATCCACCTAGAAGCCTGCCATGGCTGCTGCCAGCTGCAGCAGCCACATAGGCCATGAAGGTGGCGTGT 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043757.15 |
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| 3UTR GCA 72 bp | ATCAAGGCAACACGCCACCTTCATGGCCTATGTGGCTaGTGCAGCTGGCAGCAGCCATGGCAGGCTTCTAGG | + |
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Preference number: 3 (lower is better) Translates to: IKATRHLHGLCG*CSWQQPWQASR Trigger: CCTAGAAGCCTGCCATGGCTGCTGCCAGCTGCAGCAGCCACATAGGCCATGAAGGTGGCGTGTTGCCTTGAT 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043757.15 |
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| 3UTR CCA 72 bp | TGCTCTCACACACATCAAGGCAACACGCCACCTTCATaGCCTATGTGGCTGCTGCAGCTGGCAGCAGCCATG | + |
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Preference number: 3 (lower is better) Translates to: CSHTHQGNTPPS*PMWLLQLAAAM Trigger: CATGGCTGCTGCCAGCTGCAGCAGCCACATAGGCCATGAAGGTGGCGTGTTGCCTTGATGTGTGTGAGAGCA 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043757.15 |
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| 3UTR TCA 72 bp | CCACGAGACAAGGGACCACAGGCACCAGATCTTTGGTaGAACAGTCCAGGTCTCAGACACTTGCCTCCAGCC | + |
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Preference number: 3 (lower is better) Translates to: PRDKGPQAPDLW*NSPGLRHLPPA Trigger: GGCTGGAGGCAAGTGTCTGAGACCTGGACTGTTTCACCAAAGATCTGGTGCCTGTGGTCCCTTGTCTCGTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043757.15 |
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| 3UTR GCA 72 bp | TGTAAAGGAGACTTCAGTTCTAGAGTTCTCCTTTCCTaGCCTCAAGTCCCCACGAGACAAGGGACCACAGGC | + |
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Preference number: 3 (lower is better) Translates to: CKGDFSSRVLLS*PQVPTRQGTTG Trigger: GCCTGTGGTCCCTTGTCTCGTGGGGACTTGAGGGCAGGAAAGGAGAACTCTAGAACTGAAGTCTCCTTTACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043757.15 |
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| 3UTR TCA 72 bp | ATTTCTGTGCCTTGGAGGGTAGCATGGTCTACTGAGTaGGTTCTGGGACAGCTAGGGCTATGTAGAGTGATC | + |
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Preference number: 3 (lower is better) Translates to: ISVPWRVAWSTE*VLGQLGLCRVI Trigger: GATCACTCTACATAGCCCTAGCTGTCCCAGAACTCACTCAGTAGACCATGCTACCCTCCAAGGCACAGAAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172661.2 |
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| 3UTR CCA 72 bp | TCCTTTCTTCACTACTTTGTCTTTAATCCCAGCACCTaGGAAGCAGAAGCAAGCAGATTTCTGTGCCTTGGA | + |
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Preference number: 3 (lower is better) Translates to: SFLHYFVFNPST*EAEASRFLCLG Trigger: TCCAAGGCACAGAAATCTGCTTGCTTCTGCTTCCCAGGTGCTGGGATTAAAGACAAAGTAGTGAAGAAAGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172661.2 |
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| 3UTR CAA 72 bp | AGGGGAGACGGCCTAGACTCCAGCCGTAGGAGCTGGTaGCAGCAGGCTTCTAGGTGGATGAGGGGAGACGGC | + |
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Preference number: 4 (lower is better) Translates to: RGDGLDSSRRSW*QQASRWMRGDG Trigger: GCCGTCTCCCCTCATCCACCTAGAAGCCTGCTGCAACCAGCTCCTACGGCTGGAGTCTAGGCCGTCTCCCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043757.15 |
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| CDS-3UTR TCA 90 bp | AGCTGGCAGCAGCCATGGCAGGCTTCTAGGTGGATGAGGGGAGACGGCCTAGACGGGGGTCTGGGAAGGTaGAGCGCACGGTGTACTCCT | + |
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Preference number: 4 (lower is better) Translates to: SWQQPWQASRWMRGDGLDGGLGR*SARCTP Trigger: AGGAGTACACCGTGCGCTTCACCTTCCCAGACCCCC...GTCTAGGCCGTCTCCCCTCATCCACCTAGAAGCCTGCCATGGCTGCTGCCAGCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043757.15 |
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| CDS-3UTR GCA 90 bp | TGCAGCTGGCAGCAGCCATGGCAGGCTTCTAGGTGGATGAGGGGAGACGGCCTATCAGCCACCACCTCCTaGTCGCACAGCAGCACGTCA | + |
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Preference number: 4 (lower is better) Translates to: CSWQQPWQASRWMRGDGLSATTS*SHSSTS Trigger: TGACGTGCTGCTGTGCGAGCAGGAGGTGGTGGCTGA...TAGGCCGTCTCCCCTCATCCACCTAGAAGCCTGCCATGGCTGCTGCCAGCTGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043757.15 |
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| CDS-3UTR GCA 90 bp | CTCCTTTCCTGCCCTCAAGTCCCCACGAGACAAGGGACCACAGGCACCAGATCTCTTGGCCTCTGCAGCTaGTGCCCCGGTAGCTCGCAG | + |
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Preference number: 4 (lower is better) Translates to: LLSCPQVPTRQGTTGTRSLGLCS*CPGSSQ Trigger: CTGCGAGCTACCGGGGCAGCAGCTGCAGAGGCCAAG...AGATCTGGTGCCTGTGGTCCCTTGTCTCGTGGGGACTTGAGGGCAGGAAAGGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043757.15 |
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| CDS-3UTR GCA 90 bp | TCCTTTCCTGCCCTCAAGTCCCCACGAGACAAGGGACCACAGGCACCAGATCTTCCGTGCCTTGGCCTCTaGAGCTGCTGCCCCGGTAGC | + |
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Preference number: 4 (lower is better) Translates to: SFPALKSPRDKGPQAPDLPCLGL*SCCPGS Trigger: GCTACCGGGGCAGCAGCTGCAGAGGCCAAGGCACGG...AAGATCTGGTGCCTGTGGTCCCTTGTCTCGTGGGGACTTGAGGGCAGGAAAGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043757.15 |
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| CDS-3UTR GCA 90 bp | CTTTCCTGCCCTCAAGTCCCCACGAGACAAGGGACCACAGGCACCAGATCTTTGAGCCAGGATCCGCCGTaGCTTGGCCTCTGCAGCTGC | + |
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Preference number: 4 (lower is better) Translates to: LSCPQVPTRQGTTGTRSLSQDPP*LGLCSC Trigger: GCAGCTGCAGAGGCCAAGGCACGGCGGATCCTGGCT...CAAAGATCTGGTGCCTGTGGTCCCTTGTCTCGTGGGGACTTGAGGGCAGGAAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043757.15 |
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| CDS-3UTR GCA 90 bp | TGCAGCTGGCAGCAGCCATGGCAGGCTTCTAGGTGGATGAGGGGAGACGGCCTAGCAGCAGGAGTAGTGTaGTCTTCCCCACACCATTGG | + |
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Preference number: 4 (lower is better) Translates to: CSWQQPWQASRWMRGDGLAAGVV*SSPHHW Trigger: CCAATGGTGTGGGGAAGAGCACACTACTCCTGCTGC...TAGGCCGTCTCCCCTCATCCACCTAGAAGCCTGCCATGGCTGCTGCCAGCTGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043757.15 |
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| CDS-3UTR GCA 90 bp | CTCCTTTCCTGCCCTCAAGTCCCCACGAGACAAGGGACCACAGGCACCAGATCTGGCGTCTCCTCCATGTaGAGCTGCTCTGCGTACTGC | + |
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Preference number: 4 (lower is better) Translates to: LLSCPQVPTRQGTTGTRSGVSSM*SCSAYC Trigger: GCAGTACGCAGAGCAGCTGCACATGGAGGAGACGCC...AGATCTGGTGCCTGTGGTCCCTTGTCTCGTGGGGACTTGAGGGCAGGAAAGGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043757.15 |
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| CDS-3UTR CCA 90 bp | CTTTCCTGCCCTCAAGTCCCCACGAGACAAGGGACCACAGGCACCAGATCTTTGTGGATGGTGTGGGCGTaGCTCTCCAGGCCAAAGCGG | + |
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Preference number: 4 (lower is better) Translates to: LSCPQVPTRQGTTGTRSLWMVWA*LSRPKR Trigger: CCGCTTTGGCCTGGAGAGCCACGCCCACACCATCCA...CAAAGATCTGGTGCCTGTGGTCCCTTGTCTCGTGGGGACTTGAGGGCAGGAAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043757.15 |
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| CDS-3UTR TCA 90 bp | CTTTCCTGCCCTCAAGTCCCCACGAGACAAGGGACCACAGGCACCAGATCTTTGTGCTCCAGCTGTCCCTaGAGCCGTCTCTCCTCCTCT | + |
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Preference number: 4 (lower is better) Translates to: LSCPQVPTRQGTTGTRSLCSSCP*SRLSSS Trigger: AGAGGAGGAGAGACGGCTTCAGGGACAGCTGGAGCA...CAAAGATCTGGTGCCTGTGGTCCCTTGTCTCGTGGGGACTTGAGGGCAGGAAAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043757.15 |
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| CDS-3UTR TCA 90 bp | TGGATGCTCTCACACACATCAAGGCAACACGCCACCTTCATGGCCTATGTGGCTGGCGCGCATCGTGGCTaGCAACGATCACAGCCCCCT | + |
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Preference number: 4 (lower is better) Translates to: WMLSHTSRQHATFMAYVAGAHRG*QRSQPP Trigger: AGGGGGCTGTGATCGTTGTCAGCCACGATGCGCGCC...AGCCACATAGGCCATGAAGGTGGCGTGTTGCCTTGATGTGTGTGAGAGCATCCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043757.15 |
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| CDS-3UTR CCA 90 bp | GAGTCAGTAGTACCCTTCCAAAAGGAGGGACCAGGGTCAGTTCTGAGTGGCAAAGGATCCGCCGTGCCTTaGCCTCTGCAGCTGCTGCCC | + |
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Preference number: 4 (lower is better) Translates to: ESVVPFQKEGPGSVLSGKGSAVP*PLQLLP Trigger: GGGCAGCAGCTGCAGAGGCCAAGGCACGGCGGATCC...TTTGCCACTCAGAACTGACCCTGGTCCCTCCTTTTGGAAGGGTACTACTGACTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043757.15 |
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| CDS-3UTR CCA 90 bp | TCCTTTCCTGCCCTCAAGTCCCCACGAGACAAGGGACCACAGGCACCAGATCTTCAGATCTGGATGGTGTaGGCGTGGCTCTCCAGGCCA | + |
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Preference number: 4 (lower is better) Translates to: SFPALKSPRDKGPQAPDLQIWMV*AWLSRP Trigger: TGGCCTGGAGAGCCACGCCCACACCATCCAGATCTG...AAGATCTGGTGCCTGTGGTCCCTTGTCTCGTGGGGACTTGAGGGCAGGAAAGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043757.15 |
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| CDS-3UTR CCA 90 bp | GCTTCTAGGTGGATGAGGGGAGACGGCCTAGACTCCAGCCATAGGAGCTGGTTGATGAGGCGCGCATCGTaGCTGACAACGATCACAGCC | + |
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Preference number: 4 (lower is better) Translates to: ASRWMRGDGLDSSHRSWLMRRAS*LTTITA Trigger: GGCTGTGATCGTTGTCAGCCACGATGCGCGCCTCAT...CAACCAGCTCCTATGGCTGGAGTCTAGGCCGTCTCCCCTCATCCACCTAGAAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043757.15 |
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| CDS-3UTR TCA 90 bp | TCCTTTCCTGCCCTCAAGTCCCCACGAGACAAGGGACCACAGGCACCAGATCTTTTCCTTCTCTTCCCCTaGGCCCTGCTCAGCCTCCTT | + |
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Preference number: 4 (lower is better) Translates to: SFPALKSPRDKGPQAPDLFLLFP*ALLSLL Trigger: AAGGAGGCTGAGCAGGGCTCAGGGGAAGAGAAGGAA...AAGATCTGGTGCCTGTGGTCCCTTGTCTCGTGGGGACTTGAGGGCAGGAAAGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000043757.15 |
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| CDS-3UTR TCA 90 bp | GTCAGTGAGTCAGTAGTACCCTTCCAAAAGGAGGGACCAGGGTCAGTTCTGAGTGCAGCGTTGGCTCCATaGACAGTGCCCTGGCCAGGG | + |
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Preference number: 4 (lower is better) Translates to: VSESVVPFQKEGPGSVLSAALAP*TVPWPG Trigger: CCCTGGCCAGGGCACTGTTCATGGAGCCAACGCTGC...ACTCAGAACTGACCCTGGTCCCTCCTTTTGGAAGGGTACTACTGACTCACTGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043757.15 |
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| CDS-3UTR TCA 90 bp | GAGACAAGGGACCACAGGCACCAGATCTTTGGTGAAACAGTCCAGGTCTCAGACCGCCGTCGATCTGACTaGCACCCTGCTCCTCCACCA | + |
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Preference number: 4 (lower is better) Translates to: ETRDHRHQIFGETVQVSDRRRSD*HPAPPP Trigger: TGGTGGAGGAGCAGGGTGTCAGTCAGATCGACGGCG...GTCTGAGACCTGGACTGTTTCACCAAAGATCTGGTGCCTGTGGTCCCTTGTCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043757.15 |
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| CDS-3UTR GCA 90 bp | GAGACAAGGGACCACAGGCACCAGATCTTTGGTGAAACAGTCCAGGTCTCAGACCCAAACGTCACACCGTaGAGGCCCAGCACAGGTGGG | + |
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Preference number: 4 (lower is better) Translates to: ETRDHRHQIFGETVQVSDPNVTP*RPSTGG Trigger: CCCACCTGTGCTGGGCCTGCACGGTGTGACGTTTGG...GTCTGAGACCTGGACTGTTTCACCAAAGATCTGGTGCCTGTGGTCCCTTGTCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043757.15 |
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| CDS-3UTR CCA 90 bp | AGCTGGCAGCAGCCATGGCAGGCTTCTAGGTGGATGAGGGGAGACGGCCTAGACCAGAGAACTTCTGTGTaGGCCGATTCTGCATCTCAG | + |
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Preference number: 4 (lower is better) Translates to: SWQQPWQASRWMRGDGLDQRTSV*ADSASQ Trigger: CTGAGATGCAGAATCGGCCCACACAGAAGTTCTCTG...GTCTAGGCCGTCTCCCCTCATCCACCTAGAAGCCTGCCATGGCTGCTGCCAGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043757.15 |
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| CDS-3UTR CCA 90 bp | CTTTCCTGCCCTCAAGTCCCCACGAGACAAGGGACCACAGGCACCAGATCTTTGGCTGCAGGTACTCAGTaGGCGTCTCCTCCATGTGCA | + |
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Preference number: 4 (lower is better) Translates to: LSCPQVPTRQGTTGTRSLAAGTQ*ASPPCA Trigger: TGCACATGGAGGAGACGCCCACTGAGTACCTGCAGC...CAAAGATCTGGTGCCTGTGGTCCCTTGTCTCGTGGGGACTTGAGGGCAGGAAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043757.15 |
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| CDS-3UTR CCA 90 bp | GCTTCTAGGTGGATGAGGGGAGACGGCCTAGACTCCAGCCATAGGAGCTGGTTGGTTTGCAGATCTGGATaGTGTGGGCGTGGCTCTCCA | + |
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Preference number: 4 (lower is better) Translates to: ASRWMRGDGLDSSHRSWLVCRSG*CGRGSP Trigger: TGGAGAGCCACGCCCACACCATCCAGATCTGCAAAC...CAACCAGCTCCTATGGCTGGAGTCTAGGCCGTCTCCCCTCATCCACCTAGAAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043757.15 |
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| CDS-3UTR TCA 90 bp | GGGACCACAGGCACCAGATCTTTGGTGAAACAGTCCAGGTCTCAGACACTTGCCCCTGGTAGGGCAGATTaGAGCTCCGCTGCAGGTACT | + |
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Preference number: 4 (lower is better) Translates to: GTTGTRSLVKQSRSQTLAPGRAD*SSAAGT Trigger: AGTACCTGCAGCGGAGCTTCAATCTGCCCTACCAGG...GGCAAGTGTCTGAGACCTGGACTGTTTCACCAAAGATCTGGTGCCTGTGGTCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043757.15 |
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| CDS-3UTR GCA 90 bp | GCTCTCACACACATCAAGGCAACACGCCACCTTCATGGCCTATGTGGCTGCTGCTGGTCGGTGTCAGCTTaGCAGTCAGCAGCAGGAGTA | + |
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Preference number: 4 (lower is better) Translates to: ALTHIKATRHLHGLCGCCWSVSA*QSAAGV Trigger: TACTCCTGCTGCTGACTGGCAAGCTGACACCGACCA...GCAGCAGCCACATAGGCCATGAAGGTGGCGTGTTGCCTTGATGTGTGTGAGAGC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043757.15 |
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| CDS-3UTR CCA 90 bp | GTGAAACAGTCCAGGTCTCAGACACTTGCCTCCAGCCCTGAGGTTCTGGCTGTTGCACGGTGTACTCCTTaGGACGCTTCAGGAGCTCAG | + |
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Preference number: 4 (lower is better) Translates to: VKQSRSQTLASSPEVLAVARCTP*DASGAQ Trigger: CTGAGCTCCTGAAGCGTCCCAAGGAGTACACCGTGC...AACAGCCAGAACCTCAGGGCTGGAGGCAAGTGTCTGAGACCTGGACTGTTTCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043757.15 |
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| 3UTR CAA 72 bp | GTCCCCACGAGACAAGGGACCACAGGCACCAGATCTTaGGTGAAACAGTCCAGGTCTCAGACACTTGCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: VPTRQGTTGTRS*VKQSRSQTLAS Trigger: GGAGGCAAGTGTCTGAGACCTGGACTGTTTCACCAAAGATCTGGTGCCTGTGGTCCCTTGTCTCGTGGGGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043757.15 |
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| CDS-3UTR GCA 90 bp | TCCTTTCCTGCCCTCAAGTCCCCACGAGACAAGGGACCACAGGCACCAGATCTTGCTGGCACAGACAGTTaGTTAAGTCGCTCCATGAGC | + |
|
Preference number: 4 (lower is better) Translates to: SFPALKSPRDKGPQAPDLAGTDS*LSRSMS Trigger: GCTCATGGAGCGACTTAAGCAACTGTCTGTGCCAGC...AAGATCTGGTGCCTGTGGTCCCTTGTCTCGTGGGGACTTGAGGGCAGGAAAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043757.15 |
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| CDS-3UTR CCA 90 bp | GCTCTCACACACATCAAGGCAACACGCCACCTTCATGGCCTATGTGGCTGCTGCTCTTCCCCACACCATTaGGACCCACGATGCAAATCC | + |
|
Preference number: 4 (lower is better) Translates to: ALTHIKATRHLHGLCGCCSSPHH*DPRCKS Trigger: GGATTTGCATCGTGGGTCCCAATGGTGTGGGGAAGA...GCAGCAGCCACATAGGCCATGAAGGTGGCGTGTTGCCTTGATGTGTGTGAGAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043757.15 |
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| CDS-3UTR CCA 90 bp | CTCCTTTCCTGCCCTCAAGTCCCCACGAGACAAGGGACCACAGGCACCAGATCTCCCCCAGGGCATCGATaGACTCTATGTCCAAGTTAT | + |
|
Preference number: 4 (lower is better) Translates to: LLSCPQVPTRQGTTGTRSPPGHR*TLCPSY Trigger: ATAACTTGGACATAGAGTCCATCGATGCCCTGGGGG...AGATCTGGTGCCTGTGGTCCCTTGTCTCGTGGGGACTTGAGGGCAGGAAAGGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043757.15 |
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| CDS-3UTR GCA 90 bp | GCTTCTAGGTGGATGAGGGGAGACGGCCTAGACTCCAGCCATAGGAGCTGGTTGTGCTGTTGCTGTTGCTaGTCCTTCTCCTTCTGCAAT | + |
|
Preference number: 4 (lower is better) Translates to: ASRWMRGDGLDSSHRSWLCCCCC*SFSFCN Trigger: ATTGCAGAAGGAGAAGGAGCAGCAACAGCAACAGCA...CAACCAGCTCCTATGGCTGGAGTCTAGGCCGTCTCCCCTCATCCACCTAGAAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043757.15 |
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| CDS-3UTR GCA 90 bp | GCTTCTAGGTGGATGAGGGGAGACGGCCTAGACTCCAGCCATAGGAGCTGGTTGGGCATAGGGATCGTTTaGCTTCAAGTCCCCTTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: ASRWMRGDGLDSSHRSWLGIGIV*LQVPFF Trigger: AAAGAAGGGGACTTGAAGGCAAACGATCCCTATGCC...CAACCAGCTCCTATGGCTGGAGTCTAGGCCGTCTCCCCTCATCCACCTAGAAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043757.15 |
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| CDS-3UTR GCA 90 bp | TGCAGCTGGCAGCAGCCATGGCAGGCTTCTAGGTGGATGAGGGGAGACGGCCTATTCAGTTTCTTCTCCTaGTTCTCGTACTGCTTTAGC | + |
|
Preference number: 4 (lower is better) Translates to: CSWQQPWQASRWMRGDGLFSFFS*FSYCFS Trigger: GCTAAAGCAGTACGAGAAGCAGGAGAAGAAACTGAA...TAGGCCGTCTCCCCTCATCCACCTAGAAGCCTGCCATGGCTGCTGCCAGCTGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043757.15 |
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| CDS-3UTR CCA 90 bp | GGGACCACAGGCACCAGATCTTTGGTGAAACAGTCCAGGTCTCAGACACTTGCCGATGCGATTCTTCTCTaGCTTGGCGGGCTTGAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: GTTGTRSLVKQSRSQTLADAILL*LGGLEN Trigger: GTTCTCAAGCCCGCCAAGCCAGAGAAGAATCGCATC...GGCAAGTGTCTGAGACCTGGACTGTTTCACCAAAGATCTGGTGCCTGTGGTCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043757.15 |
||
| CDS-3UTR CCA 90 bp | CTTTCCTGCCCTCAAGTCCCCACGAGACAAGGGACCACAGGCACCAGATCTTTGAATAGCTCCTTGCCGTaGGCGGAGATGCTGAACTTT | + |
|
Preference number: 4 (lower is better) Translates to: LSCPQVPTRQGTTGTRSLNSSLP*AEMLNF Trigger: AAAGTTCAGCATCTCCGCCCACGGCAAGGAGCTATT...CAAAGATCTGGTGCCTGTGGTCCCTTGTCTCGTGGGGACTTGAGGGCAGGAAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043757.15 |
||
| CDS-3UTR CCA 90 bp | GTGAAACAGTCCAGGTCTCAGACACTTGCCTCCAGCCCTGAGGTTCTGGCTGTTCAACATCAGCAGCGTTaGCTCCATGAACAGTGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: VKQSRSQTLASSPEVLAVQHQQR*LHEQCP Trigger: AGGGCACTGTTCATGGAGCCAACGCTGCTGATGTTG...AACAGCCAGAACCTCAGGGCTGGAGGCAAGTGTCTGAGACCTGGACTGTTTCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043757.15 |
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| CDS-3UTR CCA 90 bp | GAGTCAGTAGTACCCTTCCAAAAGGAGGGACCAGGGTCAGTTCTGAGTGGCAAAGCTTTTCCGCTTGCTTaGTGGACTTGCCCCCAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: ESVVPFQKEGPGSVLSGKAFPLA*WTCPQP Trigger: AGGCTGGGGGCAAGTCCACCAAGCAAGCGGAAAAGC...TTTGCCACTCAGAACTGACCCTGGTCCCTCCTTTTGGAAGGGTACTACTGACTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000043757.15 |
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| CDS-3UTR CCA 90 bp | ACGGATGGATGCTCTCACACACATCAAGGCAACACGCCACCTTCATGGCCTATGGAGAGTTTGCAGATCTaGATGGTGTGGGCGTGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: TDGCSHTHQGNTPPSWPMESLQI*MVWAWL Trigger: GAGCCACGCCCACACCATCCAGATCTGCAAACTCTC...CATAGGCCATGAAGGTGGCGTGTTGCCTTGATGTGTGTGAGAGCATCCATCCGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043757.15 |
||
| CDS-3UTR TCA 90 bp | GTGAAACAGTCCAGGTCTCAGACACTTGCCTCCAGCCCTGAGGTTCTGGCTGTTCTGTCCTTCCCTTGCTaGGGAGGCTCCTTTTCTTTA | + |
|
Preference number: 4 (lower is better) Translates to: VKQSRSQTLASSPEVLAVLSFPC*GGSFSL Trigger: TAAAGAAAAGGAGCCTCCTCAGCAAGGGAAGGACAG...AACAGCCAGAACCTCAGGGCTGGAGGCAAGTGTCTGAGACCTGGACTGTTTCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043757.15 |
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| CDS-3UTR TCA 90 bp | TCCTTTCCTGCCCTCAAGTCCCCACGAGACAAGGGACCACAGGCACCAGATCTTGCTGGTACATCTTCTTaGAGGTCATGTAATTGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: SFPALKSPRDKGPQAPDLAGTSS*RSCNCP Trigger: GGGGCAATTACATGACCTTCAAGAAGATGTACCAGC...AAGATCTGGTGCCTGTGGTCCCTTGTCTCGTGGGGACTTGAGGGCAGGAAAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043757.15 |
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| CDS-3UTR TCA 90 bp | CAGCTAGGGCTATGTAGAGTGATCTTGTTTTCTTCGAGGCAGGGCTTCTCTGTGCCTTCCTCGGCTTCCTaGTGCTGGGATCAAAGGCGT | + |
|
Preference number: 4 (lower is better) Translates to: QLGLCRVILFSSRQGFSVPSSAS*CWDQRR Trigger: ACGCCTTTGATCCCAGCATCAGGAAGCCGAGGAAGG...CACAGAGAAGCCCTGCCTCGAAGAAAACAAGATCACTCTACATAGCCCTAGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172661.2 |
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| CDS-3UTR GCA 90 bp | GCTGTTTGTGTCAGTGAGTCAGTAGTACCCTTCCAAAAGGAGGGACCAGGGTCAAGATTGAAGCTCCGCTaGAGGTACTCAGTGGGCGTC | + |
|
Preference number: 4 (lower is better) Translates to: AVCVSESVVPFQKEGPGSRLKLR*RYSVGV Trigger: GACGCCCACTGAGTACCTGCAGCGGAGCTTCAATCT...TGACCCTGGTCCCTCCTTTTGGAAGGGTACTACTGACTCACTGACACAAACAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043757.15 |
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| CDS-3UTR CCA 90 bp | ACGGATGGATGCTCTCACACACATCAAGGCAACACGCCACCTTCATGGCCTATGAAACATTTCCACCCTTaGCCTTCTTCCGTCCTCGGG | + |
|
Preference number: 4 (lower is better) Translates to: TDGCSHTHQGNTPPSWPMKHFHP*PSSVLG Trigger: CCCGAGGACGGAAGAAGGCCAAGGGTGGAAATGTTT...CATAGGCCATGAAGGTGGCGTGTTGCCTTGATGTGTGTGAGAGCATCCATCCGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043757.15 |
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| CDS-3UTR CCA 90 bp | GGGACCACAGGCACCAGATCTTTGGTGAAACAGTCCAGGTCTCAGACACTTGCCGAAGACACCTCTGCCTaGGACACAGAGAAGTCGTTT | + |
|
Preference number: 4 (lower is better) Translates to: GTTGTRSLVKQSRSQTLAEDTSA*DTEKSF Trigger: AAACGACTTCTCTGTGTCCCAGGCAGAGGTGTCTTC...GGCAAGTGTCTGAGACCTGGACTGTTTCACCAAAGATCTGGTGCCTGTGGTCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043757.15 |
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| CDS-3UTR CCA 90 bp | GAGTCAGTAGTACCCTTCCAAAAGGAGGGACCAGGGTCAGTTCTGAGTGGCAAATGCTCAGGGCACGGTTaGCAATGTGCTTCAGAAGCG | + |
|
Preference number: 4 (lower is better) Translates to: ESVVPFQKEGPGSVLSGKCSGHG*QCASEA Trigger: CGCTTCTGAAGCACATTGCCAACCGTGCCCTGAGCA...TTTGCCACTCAGAACTGACCCTGGTCCCTCCTTTTGGAAGGGTACTACTGACTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043757.15 |
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| CDS-3UTR CCA 90 bp | CACAGGCACCAGATCTTTGGTGAAACAGTCCAGGTCTCAGACACTTGCCTCCAGAGAAAGCCCTGGTCGTaGGAGACAATCAGCAACGTC | + |
|
Preference number: 4 (lower is better) Translates to: HRHQIFGETVQVSDTCLQRKPWS*ETISNV Trigger: GACGTTGCTGATTGTCTCCCACGACCAGGGCTTTCT...CTGGAGGCAAGTGTCTGAGACCTGGACTGTTTCACCAAAGATCTGGTGCCTGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043757.15 |
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| CDS-3UTR CCA 90 bp | CACAGGCACCAGATCTTTGGTGAAACAGTCCAGGTCTCAGACACTTGCCTCCAGTCATCCAGAAAGCCCTaGTCGTGGGAGACAATCAGC | + |
|
Preference number: 4 (lower is better) Translates to: HRHQIFGETVQVSDTCLQSSRKP*SWETIS Trigger: GCTGATTGTCTCCCACGACCAGGGCTTTCTGGATGA...CTGGAGGCAAGTGTCTGAGACCTGGACTGTTTCACCAAAGATCTGGTGCCTGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043757.15 |
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| CDS-3UTR GCA 90 bp | TCCTTTCCTGCCCTCAAGTCCCCACGAGACAAGGGACCACAGGCACCAGATCTTTGCTCCTTCTCCTTCTaGAATTTTTCCTCTTCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: SFPALKSPRDKGPQAPDLCSFSF*NFSSSP Trigger: TGGGGAAGAGGAAAAATTGCAGAAGGAGAAGGAGCA...AAGATCTGGTGCCTGTGGTCCCTTGTCTCGTGGGGACTTGAGGGCAGGAAAGGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000043757.15 |
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| CDS-3UTR GCA 90 bp | GCTGTTTGTGTCAGTGAGTCAGTAGTACCCTTCCAAAAGGAGGGACCAGGGTCATCTTCCCCTGAGCCCTaGTCAGCCTCCTTTTTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: AVCVSESVVPFQKEGPGSSSPEP*SASFLS Trigger: AGACAAAAAGGAGGCTGAGCAGGGCTCAGGGGAAGA...TGACCCTGGTCCCTCCTTTTGGAAGGGTACTACTGACTCACTGACACAAACAGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000043757.15 |
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| CDS-3UTR GCA 90 bp | ATTGAGAAGGACACAATCCACACGGATGGATGCTCTCACACACATCAAGGCAACCTTGCTTGGTGGACTTaGCCCCAGCCTTCAGCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: IEKDTIHTDGCSHTHQGNLAWWT*PQPSAP Trigger: AGGAGCTGAAGGCTGGGGGCAAGTCCACCAAGCAAG...GTTGCCTTGATGTGTGTGAGAGCATCCATCCGTGTGGATTGTGTCCTTCTCAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043757.15 |
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| CDS-3UTR GCA 90 bp | GAGACAAGGGACCACAGGCACCAGATCTTTGGTGAAACAGTCCAGGTCTCAGACTTCCGTCGGCACTTCTaGTGTTTTCGAGTCAGGACT | + |
|
Preference number: 4 (lower is better) Translates to: ETRDHRHQIFGETVQVSDFRRHF*CFRVRT Trigger: AGTCCTGACTCGAAAACAGCAGAAGTGCCGACGGAA...GTCTGAGACCTGGACTGTTTCACCAAAGATCTGGTGCCTGTGGTCCCTTGTCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043757.15 |
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| CDS-3UTR CCA 90 bp | GGATGCTCTCACACACATCAAGGCAACACGCCACCTTCATGGCCTATGTGGCTGTTCCTCATCACTGGCTaGCACAGACAGTTGCTTAAG | + |
|
Preference number: 4 (lower is better) Translates to: GCSHTHQGNTPPSWPMWLFLITG*HRQLLK Trigger: CTTAAGCAACTGTCTGTGCCAGCCAGTGATGAGGAA...CAGCCACATAGGCCATGAAGGTGGCGTGTTGCCTTGATGTGTGTGAGAGCATCC 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043757.15 |
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| CDS-3UTR CCA 90 bp | ACGGATGGATGCTCTCACACACATCAAGGCAACACGCCACCTTCATGGCCTATGTTTTCTAACATTGCCTaGCGGGAAGACACCTCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: TDGCSHTHQGNTPPSWPMFSNIA*REDTSA Trigger: GGCAGAGGTGTCTTCCCGCCAGGCAATGTTAGAAAA...CATAGGCCATGAAGGTGGCGTGTTGCCTTGATGTGTGTGAGAGCATCCATCCGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043757.15 |
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| CDS-3UTR CCA 90 bp | ACGGATGGATGCTCTCACACACATCAAGGCAACACGCCACCTTCATGGCCTATGTCCACCACCCACAACTaGCAGTTGGTTTCTGTGATG | + |
|
Preference number: 4 (lower is better) Translates to: TDGCSHTHQGNTPPSWPMSTTHN*QLVSVM Trigger: CATCACAGAAACCAACTGCCAGTTGTGGGTGGTGGA...CATAGGCCATGAAGGTGGCGTGTTGCCTTGATGTGTGTGAGAGCATCCATCCGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043757.15 |
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| CDS-3UTR GCA 90 bp | TCCTTTCCTGCCCTCAAGTCCCCACGAGACAAGGGACCACAGGCACCAGATCTTTTGTTTGTCCTCTACTaGCAGCTCTTCAAAGAACGT | + |
|
Preference number: 4 (lower is better) Translates to: SFPALKSPRDKGPQAPDLLFVLY*QLFKER Trigger: ACGTTCTTTGAAGAGCTGGCAGTAGAGGACAAACAA...AAGATCTGGTGCCTGTGGTCCCTTGTCTCGTGGGGACTTGAGGGCAGGAAAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043757.15 |
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| CDS-3UTR GCA 90 bp | TGGATGCTCTCACACACATCAAGGCAACACGCCACCTTCATGGCCTATGTGGCTTCCTGCTTCTCGTACTaGTTTAGCAGCTCTTTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: WMLSHTSRQHATFMAYVASCFSY*FSSSFC Trigger: GCAGAAAGAGCTGCTAAAGCAGTACGAGAAGCAGGA...AGCCACATAGGCCATGAAGGTGGCGTGTTGCCTTGATGTGTGTGAGAGCATCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043757.15 |
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| CDS-3UTR GCA 90 bp | CACAGGCACCAGATCTTTGGTGAAACAGTCCAGGTCTCAGACACTTGCCTCCAGCATGTGCAGCTGCTCTaGGTACTGCTGGTTAAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: HRHQIFGETVQVSDTCLQHVQLL*VLLVKE Trigger: TTCTTTAACCAGCAGTACGCAGAGCAGCTGCACATG...CTGGAGGCAAGTGTCTGAGACCTGGACTGTTTCACCAAAGATCTGGTGCCTGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043757.15 |
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| CDS-3UTR CCA 90 bp | TCATTGAGAAGGACACAATCCACACGGATGGATGCTCTCACACACATCAAGGCAGCGTTGAGGTCCAGGTaGTTAGTGGGCTCATCCAAC | + |
|
Preference number: 4 (lower is better) Translates to: SLRRTQSTRMDALTHIKAALRSR*LVGSSN Trigger: GTTGGATGAGCCCACTAACCACCTGGACCTCAACGC...TGCCTTGATGTGTGTGAGAGCATCCATCCGTGTGGATTGTGTCCTTCTCAATGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043757.15 |
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| 3UTR CAA 72 bp | CCAGCTCAGTTACCTCAAGGGGAACACAGTCCTTCATaGAGAAGGACACAATCCACACGGATGGATGCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: PAQLPQGEHSPS*RRTQSTRMDAL Trigger: GAGAGCATCCATCCGTGTGGATTGTGTCCTTCTCAATGAAGGACTGTGTTCCCCTTGAGGTAACTGAGCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043757.15 |
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| CDS-3UTR GCA 90 bp | ATTGAGAAGGACACAATCCACACGGATGGATGCTCTCACACACATCAAGGCAACTCCTCCATGTGCAGCTaGTCTGCGTACTGCTGGTTA | + |
|
Preference number: 4 (lower is better) Translates to: IEKDTIHTDGCSHTHQGNSSMCS*SAYCWL Trigger: TAACCAGCAGTACGCAGAGCAGCTGCACATGGAGGA...GTTGCCTTGATGTGTGTGAGAGCATCCATCCGTGTGGATTGTGTCCTTCTCAAT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043757.15 |
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| CDS-3UTR CCA 90 bp | GGGACCACAGGCACCAGATCTTTGGTGAAACAGTCCAGGTCTCAGACACTTGCCTCTTTCTGCTTCTGCTaGTACATCTTCTTGAAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: GTTGTRSLVKQSRSQTLASFCFC*YIFLKV Trigger: GACCTTCAAGAAGATGTACCAGCAGAAGCAGAAAGA...GGCAAGTGTCTGAGACCTGGACTGTTTCACCAAAGATCTGGTGCCTGTGGTCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043757.15 |
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| CDS-3UTR CCA 90 bp | TGGATGCTCTCACACACATCAAGGCAACACGCCACCTTCATGGCCTATGTGGCTTGCTCTGCGTACTGCTaGTTAAAGAAGCCGATTTTC | + |
|
Preference number: 4 (lower is better) Translates to: WMLSHTSRQHATFMAYVACSAYC*LKKPIF Trigger: GAAAATCGGCTTCTTTAACCAGCAGTACGCAGAGCA...AGCCACATAGGCCATGAAGGTGGCGTGTTGCCTTGATGTGTGTGAGAGCATCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043757.15 |
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| CDS-3UTR CCA 90 bp | GGATGCTCTCACACACATCAAGGCAACACGCCACCTTCATGGCCTATGTGGCTGGTCCAAGTTATTGGTTaGTTCATCCAAGATGAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: GCSHTHQGNTPPSWPMWLVQVIG*FIQDED Trigger: GTCCTCATCTTGGATGAACCAACCAATAACTTGGAC...CAGCCACATAGGCCATGAAGGTGGCGTGTTGCCTTGATGTGTGTGAGAGCATCC 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043757.15 |
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| CDS-3UTR TCA 90 bp | TCATTGAGAAGGACACAATCCACACGGATGGATGCTCTCACACACATCAAGGCATGTACAGGTCAGCATTaGCGAATAGCTCCTTGCCGT | + |
|
Preference number: 4 (lower is better) Translates to: SLRRTQSTRMDALTHIKACTGQH*RIAPCR Trigger: ACGGCAAGGAGCTATTCGTCAATGCTGACCTGTACA...TGCCTTGATGTGTGTGAGAGCATCCATCCGTGTGGATTGTGTCCTTCTCAATGA 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043757.15 |
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| CDS-3UTR GCA 90 bp | TCATTGAGAAGGACACAATCCACACGGATGGATGCTCTCACACACATCAAGGCAAGCTGCTCTGCGTACTaGTGGTTAAAGAAGCCGATT | + |
|
Preference number: 4 (lower is better) Translates to: SLRRTQSTRMDALTHIKASCSAY*WLKKPI Trigger: AATCGGCTTCTTTAACCAGCAGTACGCAGAGCAGCT...TGCCTTGATGTGTGTGAGAGCATCCATCCGTGTGGATTGTGTCCTTCTCAATGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043757.15 |
||
| CDS-3UTR GCA 90 bp | TCATTGAGAAGGACACAATCCACACGGATGGATGCTCTCACACACATCAAGGCATTTAGCAGCTCTTTCTaGTTCTGCTGGTACATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: SLRRTQSTRMDALTHIKAFSSSF*FCWYIF Trigger: GAAGATGTACCAGCAGAAGCAGAAAGAGCTGCTAAA...TGCCTTGATGTGTGTGAGAGCATCCATCCGTGTGGATTGTGTCCTTCTCAATGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043757.15 |
||
| CDS GCA 90 bp | ATTCTGCATCTCAGGGTCGAAGCCCAAGCCAGCCAGGATCCGCCGTaGCTTGGCCTCTGCAGCTGCTGCCCCGGTAGCTCGCAGTTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: ILHLRVEAQASQDPP*LGLCSCCPGSSQFL Trigger: GAGGAACTGCGAGCTACCGGGGCAGCAGCTGCAGAGGCCAAGGCACGGCGGATCCTGGCTGGCTTGGGCTTCGACCCTGAGATGCAGAAT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043757.15 |
||
| CDS GCA 90 bp | AGGGTCGAAGCCCAAGCCAGCCAGGATCCGCCGTGCCTTGGCCTCTaGAGCTGCTGCCCCGGTAGCTCGCAGTTCCTCATACACCTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: RVEAQASQDPPCLGL*SCCPGSSQFLIHLF Trigger: GAAAAGGTGTATGAGGAACTGCGAGCTACCGGGGCAGCAGCTGCAGAGGCCAAGGCACGGCGGATCCTGGCTGGCTTGGGCTTCGACCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043757.15 |
||
| CDS CCA 90 bp | GCTTTCTGCCCACCGGAGAGTTTGCAGATCTGGATGGTGTGGGCGTaGCTCTCCAGGCCAAAGCGGCCCAAGCACTTCCGGGCATCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: AFCPPESLQIWMVWA*LSRPKRPKHFRASW Trigger: CCAGGATGCCCGGAAGTGCTTGGGCCGCTTTGGCCTGGAGAGCCACGCCCACACCATCCAGATCTGCAAACTCTCCGGTGGGCAGAAAGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043757.15 |
||
| CDS CCA 90 bp | ACTCGGGCTTTCTGCCCACCGGAGAGTTTGCAGATCTGGATGGTGTaGGCGTGGCTCTCCAGGCCAAAGCGGCCCAAGCACTTCCGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: TRAFCPPESLQIWMV*AWLSRPKRPKHFRA Trigger: TGCCCGGAAGTGCTTGGGCCGCTTTGGCCTGGAGAGCCACGCCCACACCATCCAGATCTGCAAACTCTCCGGTGGGCAGAAAGCCCGAGT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043757.15 |
||
| CDS TCA 90 bp | GGCCAAAGCGGCCCAAGCACTTCCGGGCATCCTGGTAGGGCAGATTaGAGCTCCGCTGCAGGTACTCAGTGGGCGTCTCCTCCATGTGCA | + |
|
Preference number: 5 (lower is better) Translates to: GQSGPSTSGHPGRAD*SSAAGTQWASPPCA Trigger: TGCACATGGAGGAGACGCCCACTGAGTACCTGCAGCGGAGCTTCAATCTGCCCTACCAGGATGCCCGGAAGTGCTTGGGCCGCTTTGGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043757.15 |
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| CDS GCA 90 bp | ACACGCATTCTCCAACCCCCAGAGAACTTCTGTGTGGGCCGATTCTaGATCTCAGGGTCGAAGCCCAAGCCAGCCAGGATCCGCCGTGCC | + |
|
Preference number: 5 (lower is better) Translates to: TRILQPPENFCVGRF*ISGSKPKPARIRRA Trigger: GGCACGGCGGATCCTGGCTGGCTTGGGCTTCGACCCTGAGATGCAGAATCGGCCCACACAGAAGTTCTCTGGGGGTTGGAGAATGCGTGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043757.15 |
||
| CDS CCA 90 bp | ACACAACTCGGGCTTTCTGCCCACCGGAGAGTTTGCAGATCTGGATaGTGTGGGCGTGGCTCTCCAGGCCAAAGCGGCCCAAGCACTTCC | + |
|
Preference number: 5 (lower is better) Translates to: TQLGLSAHRRVCRSG*CGRGSPGQSGPSTS Trigger: GGAAGTGCTTGGGCCGCTTTGGCCTGGAGAGCCACGCCCACACCATCCAGATCTGCAAACTCTCCGGTGGGCAGAAAGCCCGAGTTGTGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043757.15 |
||
| CDS-3UTR CAA 90 bp | GGGACCACAGGCACCAGATCTTTGGTGAAACAGTCCAGGTCTCAGACACTTGCCAGGATCCGCCGTGCCTaGGCCTCTGCAGCTGCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: GTTGTRSLVKQSRSQTLARIRRA*ASAAAA Trigger: GGCAGCAGCTGCAGAGGCCAAGGCACGGCGGATCCT...GGCAAGTGTCTGAGACCTGGACTGTTTCACCAAAGATCTGGTGCCTGTGGTCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043757.15 |
||
| CDS GCA 90 bp | CCCCGTTGGTCGGTGTCAGCTTGCCAGTCAGCAGCAGGAGTAGTGTaGTCTTCCCCACACCATTGGGACCCACGATGCAAATCCGGGAGT | + |
|
Preference number: 5 (lower is better) Translates to: PRWSVSACQSAAGVV*SSPHHWDPRCKSGS Trigger: ACTCCCGGATTTGCATCGTGGGTCCCAATGGTGTGGGGAAGAGCACACTACTCCTGCTGCTGACTGGCAAGCTGACACCGACCAACGGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043757.15 |
||
| CDS CCA 90 bp | TGGCCAGGGAGACACGCATTCTCCAACCCCCAGAGAACTTCTGTGTaGGCCGATTCTGCATCTCAGGGTCGAAGCCCAAGCCAGCCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: WPGRHAFSNPQRTSV*ADSASQGRSPSQPG Trigger: TCCTGGCTGGCTTGGGCTTCGACCCTGAGATGCAGAATCGGCCCACACAGAAGTTCTCTGGGGGTTGGAGAATGCGTGTCTCCCTGGCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043757.15 |
||
| CDS-3UTR CAA 90 bp | CTTTCCTGCCCTCAAGTCCCCACGAGACAAGGGACCACAGGCACCAGATCTTTGGCTTGCTTGGTGGACTaGCCCCCAGCCTTCAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: LSCPQVPTRQGTTGTRSLACLVD*PPAFSS Trigger: GGAGCTGAAGGCTGGGGGCAAGTCCACCAAGCAAGC...CAAAGATCTGGTGCCTGTGGTCCCTTGTCTCGTGGGGACTTGAGGGCAGGAAAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043757.15 |
||
| CDS-3UTR CAA 90 bp | CTCCTTTCCTGCCCTCAAGTCCCCACGAGACAAGGGACCACAGGCACCAGATCTTTGACGAATAGCTCCTaGCCGTGGGCGGAGATGCTG | + |
|
Preference number: 5 (lower is better) Translates to: LLSCPQVPTRQGTTGTRSLTNSS*PWAEML Trigger: CAGCATCTCCGCCCACGGCAAGGAGCTATTCGTCAA...AGATCTGGTGCCTGTGGTCCCTTGTCTCGTGGGGACTTGAGGGCAGGAAAGGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043757.15 |
||
| CDS GCA 90 bp | TCAGCCGATGGTTCTTCCTCATCTCCCCGTTGGTCGGTGTCAGCTTaGCAGTCAGCAGCAGGAGTAGTGTGCTCTTCCCCACACCATTGG | + |
|
Preference number: 5 (lower is better) Translates to: SADGSSSSPRWSVSA*QSAAGVVCSSPHHW Trigger: CCAATGGTGTGGGGAAGAGCACACTACTCCTGCTGCTGACTGGCAAGCTGACACCGACCAACGGGGAGATGAGGAAGAACCATCGGCTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043757.15 |
||
| CDS-3UTR CAA 90 bp | GGATGCTCTCACACACATCAAGGCAACACGCCACCTTCATGGCCTATGTGGCTGAGCGTGGTTTTGCCTTaGCCGTTGGGTCCCACCAGC | + |
|
Preference number: 5 (lower is better) Translates to: GCSHTHQGNTPPSWPMWLSVVLP*PLGPTS Trigger: GCTGGTGGGACCCAACGGCAAAGGCAAAACCACGCT...CAGCCACATAGGCCATGAAGGTGGCGTGTTGCCTTGATGTGTGTGAGAGCATCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043757.15 |
||
| CDS GCA 90 bp | AAGCTCCGCTGCAGGTACTCAGTGGGCGTCTCCTCCATGTGCAGCTaGTCTGCGTACTGCTGGTTAAAGAAGCCGATTTTCAGCCGATGG | + |
|
Preference number: 5 (lower is better) Translates to: KLRCRYSVGVSSMCS*SAYCWLKKPIFSRW Trigger: CCATCGGCTGAAAATCGGCTTCTTTAACCAGCAGTACGCAGAGCAGCTGCACATGGAGGAGACGCCCACTGAGTACCTGCAGCGGAGCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043757.15 |
||
| CDS CCA 90 bp | GCTGTCCCTGAAGCCGTCTCTCCTCCTCTAGCAACCTCAGTCGCTTaGTATCTGCTCGAAGGACAGCTTGCACGGCTGGTGTTTCATCAG | + |
|
Preference number: 5 (lower is better) Translates to: AVPEAVSPPLATSVA*YLLEGQLARLVFHQ Trigger: CTGATGAAACACCAGCCGTGCAAGCTGTCCTTCGAGCAGATACCAAGCGACTGAGGTTGCTAGAGGAGGAGAGACGGCTTCAGGGACAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043757.15 |
||
| CDS CCA 90 bp | GCTTGCCAGTCAGCAGCAGGAGTAGTGTGCTCTTCCCCACACCATTaGGACCCACGATGCAAATCCGGGAGTCCATGTCGATGCCGAAAT | + |
|
Preference number: 5 (lower is better) Translates to: ACQSAAGVVCSSPHH*DPRCKSGSPCRCRN Trigger: ATTTCGGCATCGACATGGACTCCCGGATTTGCATCGTGGGTCCCAATGGTGTGGGGAAGAGCACACTACTCCTGCTGCTGACTGGCAAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043757.15 |
||
| CDS-3UTR CAA 90 bp | GCTTCTAGGTGGATGAGGGGAGACGGCCTAGACTCCAGCCATAGGAGCTGGTTGTTCCTCTTCCCCAGCTaGTTTGTCCTCTACTGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: ASRWMRGDGLDSSHRSWLFLFPS*FVLYCQ Trigger: CTGGCAGTAGAGGACAAACAAGCTGGGGAAGAGGAA...CAACCAGCTCCTATGGCTGGAGTCTAGGCCGTCTCCCCTCATCCACCTAGAAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043757.15 |
||
| CDS-3UTR CAA 90 bp | CTTTCCTGCCCTCAAGTCCCCACGAGACAAGGGACCACAGGCACCAGATCTTTGCTCTTCCCCACACCATaGGGACCCACGATGCAAATC | + |
|
Preference number: 5 (lower is better) Translates to: LSCPQVPTRQGTTGTRSLLFPTP*GPTMQI Trigger: GATTTGCATCGTGGGTCCCAATGGTGTGGGGAAGAG...CAAAGATCTGGTGCCTGTGGTCCCTTGTCTCGTGGGGACTTGAGGGCAGGAAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043757.15 |
||
| CDS TCA 90 bp | CCAACACCTCTCGCTTGTAGTCATCAAAGTCGCCGTCGATCTGACTaGCACCCTGCTCCTCCACCACCCACAACTGGCAGTTGGTTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: PTPLACSHQSRRRSD*HPAPPPPTTGSWFL Trigger: CAGAAACCAACTGCCAGTTGTGGGTGGTGGAGGAGCAGGGTGTCAGTCAGATCGACGGCGACTTTGATGACTACAAGCGAGAGGTGTTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043757.15 |
||
| CDS GCA 90 bp | CCGCTGCAGGTACTCAGTGGGCGTCTCCTCCATGTGCAGCTGCTCTaGGTACTGCTGGTTAAAGAAGCCGATTTTCAGCCGATGGTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: PLQVLSGRLLHVQLL*VLLVKEADFQPMVL Trigger: AAGAACCATCGGCTGAAAATCGGCTTCTTTAACCAGCAGTACGCAGAGCAGCTGCACATGGAGGAGACGCCCACTGAGTACCTGCAGCGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043757.15 |
||
| CDS-3UTR CAA 90 bp | GTGAAACAGTCCAGGTCTCAGACACTTGCCTCCAGCCCTGAGGTTCTGGCTGTTGGCTGGCACAGACAGTaGCTTAAGTCGCTCCATGAG | + |
|
Preference number: 5 (lower is better) Translates to: VKQSRSQTLASSPEVLAVGWHRQ*LKSLHE Trigger: CTCATGGAGCGACTTAAGCAACTGTCTGTGCCAGCC...AACAGCCAGAACCTCAGGGCTGGAGGCAAGTGTCTGAGACCTGGACTGTTTCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043757.15 |
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| CDS GCA 90 bp | AGATTGAAGCTCCGCTGCAGGTACTCAGTGGGCGTCTCCTCCATGTaGAGCTGCTCTGCGTACTGCTGGTTAAAGAAGCCGATTTTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: RLKLRCRYSVGVSSM*SCSAYCWLKKPIFS Trigger: GCTGAAAATCGGCTTCTTTAACCAGCAGTACGCAGAGCAGCTGCACATGGAGGAGACGCCCACTGAGTACCTGCAGCGGAGCTTCAATCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043757.15 |
||
| CDS CCA 90 bp | CCCAGGAGGTTCCTCAGCCACGGCTTTATTGATGCGATTCTTCTCTaGCTTGGCGGGCTTGAGAACACGGTTTTCTTCCTCCTCTTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: PRRFLSHGFIDAILL*LGGLENTVFFLLFL Trigger: GAGGAAGAGGAGGAAGAAAACCGTGTTCTCAAGCCCGCCAAGCCAGAGAAGAATCGCATCAATAAAGCCGTGGCTGAGGAACCTCCTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043757.15 |
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| CDS CCA 90 bp | AGCTGCTCTGCGTACTGCTGGTTAAAGAAGCCGATTTTCAGCCGATaGTTCTTCCTCATCTCCCCGTTGGTCGGTGTCAGCTTGCCAGTC | + |
|
Preference number: 5 (lower is better) Translates to: SCSAYCWLKKPIFSR*FFLISPLVGVSLPV Trigger: GACTGGCAAGCTGACACCGACCAACGGGGAGATGAGGAAGAACCATCGGCTGAAAATCGGCTTCTTTAACCAGCAGTACGCAGAGCAGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043757.15 |
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| CDS-3UTR CAA 90 bp | TGGATGCTCTCACACACATCAAGGCAACACGCCACCTTCATGGCCTATGTGGCTATGCTCAGGGCACGGTaGGCAATGTGCTTCAGAAGC | + |
|
Preference number: 5 (lower is better) Translates to: WMLSHTSRQHATFMAYVAMLRAR*AMCFRS Trigger: GCTTCTGAAGCACATTGCCAACCGTGCCCTGAGCAT...AGCCACATAGGCCATGAAGGTGGCGTGTTGCCTTGATGTGTGTGAGAGCATCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043757.15 |
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| CDS-3UTR CAA 90 bp | GCTGTTTGTGTCAGTGAGTCAGTAGTACCCTTCCAAAAGGAGGGACCAGGGTCATTGGTCGGTGTCAGCTaGCCAGTCAGCAGCAGGAGT | + |
|
Preference number: 5 (lower is better) Translates to: AVCVSESVVPFQKEGPGSLVGVS*PVSSRS Trigger: ACTCCTGCTGCTGACTGGCAAGCTGACACCGACCAA...TGACCCTGGTCCCTCCTTTTGGAAGGGTACTACTGACTCACTGACACAAACAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043757.15 |
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| CDS-3UTR CAA 90 bp | GAGACAAGGGACCACAGGCACCAGATCTTTGGTGAAACAGTCCAGGTCTCAGACACCCACAACTGGCAGTaGGTTTCTGTGATGAGGCGC | + |
|
Preference number: 5 (lower is better) Translates to: ETRDHRHQIFGETVQVSDTHNWQ*VSVMRR Trigger: GCGCCTCATCACAGAAACCAACTGCCAGTTGTGGGT...GTCTGAGACCTGGACTGTTTCACCAAAGATCTGGTGCCTGTGGTCCCTTGTCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043757.15 |
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| CDS GCA 90 bp | AGGTACTCAGTGGGCGTCTCCTCCATGTGCAGCTGCTCTGCGTACTaGTGGTTAAAGAAGCCGATTTTCAGCCGATGGTTCTTCCTCATC | + |
|
Preference number: 5 (lower is better) Translates to: RYSVGVSSMCSCSAY*WLKKPIFSRWFFLI Trigger: GATGAGGAAGAACCATCGGCTGAAAATCGGCTTCTTTAACCAGCAGTACGCAGAGCAGCTGCACATGGAGGAGACGCCCACTGAGTACCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043757.15 |
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| CDS CCA 90 bp | TACTCAGTGGGCGTCTCCTCCATGTGCAGCTGCTCTGCGTACTGCTaGTTAAAGAAGCCGATTTTCAGCCGATGGTTCTTCCTCATCTCC | + |
|
Preference number: 5 (lower is better) Translates to: YSVGVSSMCSCSAYC*LKKPIFSRWFFLIS Trigger: GGAGATGAGGAAGAACCATCGGCTGAAAATCGGCTTCTTTAACCAGCAGTACGCAGAGCAGCTGCACATGGAGGAGACGCCCACTGAGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043757.15 |
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| CDS-3UTR CAA 90 bp | ACGGATGGATGCTCTCACACACATCAAGGCAACACGCCACCTTCATGGCCTATGTCTTCCCCAGCTTGTTaGTCCTCTACTGCCAGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: TDGCSHTHQGNTPPSWPMSSPAC*SSTASS Trigger: AGAGCTGGCAGTAGAGGACAAACAAGCTGGGGAAGA...CATAGGCCATGAAGGTGGCGTGTTGCCTTGATGTGTGTGAGAGCATCCATCCGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043757.15 |
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| CDS-3UTR CAA 90 bp | ATTGAGAAGGACACAATCCACACGGATGGATGCTCTCACACACATCAAGGCAACCGCACGGTGTACTCCTaGGGACGCTTCAGGAGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: IEKDTIHTDGCSHTHQGNRTVYS*GRFRSS Trigger: TGAGCTCCTGAAGCGTCCCAAGGAGTACACCGTGCG...GTTGCCTTGATGTGTGTGAGAGCATCCATCCGTGTGGATTGTGTCCTTCTCAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043757.15 |
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| CDS-3UTR CAA 90 bp | ATTGAGAAGGACACAATCCACACGGATGGATGCTCTCACACACATCAAGGCAACAGCCAGATGACGGCGTaGAGGTCCAGGTGGTTAGTG | + |
|
Preference number: 5 (lower is better) Translates to: IEKDTIHTDGCSHTHQGNSQMTA*RSRWLV Trigger: CACTAACCACCTGGACCTCAACGCCGTCATCTGGCT...GTTGCCTTGATGTGTGTGAGAGCATCCATCCGTGTGGATTGTGTCCTTCTCAAT 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043757.15 |
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| CDS-3UTR CAA 90 bp | GCTGTTTGTGTCAGTGAGTCAGTAGTACCCTTCCAAAAGGAGGGACCAGGGTCAATGTACAGGTCAGCATaGACGAATAGCTCCTTGCCG | + |
|
Preference number: 5 (lower is better) Translates to: AVCVSESVVPFQKEGPGSMYRSA*TNSSLP Trigger: CGGCAAGGAGCTATTCGTCAATGCTGACCTGTACAT...TGACCCTGGTCCCTCCTTTTGGAAGGGTACTACTGACTCACTGACACAAACAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043757.15 |
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| CDS-3UTR CAA 90 bp | ATTGAGAAGGACACAATCCACACGGATGGATGCTCTCACACACATCAAGGCAACTTCAGAAGCGTGGTTTaGCCTTTGCCGTTGGGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: IEKDTIHTDGCSHTHQGNFRSVV*PLPLGP Trigger: GGGACCCAACGGCAAAGGCAAAACCACGCTTCTGAA...GTTGCCTTGATGTGTGTGAGAGCATCCATCCGTGTGGATTGTGTCCTTCTCAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043757.15 |
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| CDS-3UTR CAA 90 bp | TCATTGAGAAGGACACAATCCACACGGATGGATGCTCTCACACACATCAAGGCATGTTTGCTTTTCCGCTaGCTTGGTGGACTTGCCCCC | + |
|
Preference number: 5 (lower is better) Translates to: SLRRTQSTRMDALTHIKACLLFR*LGGLAP Trigger: GGGGGCAAGTCCACCAAGCAAGCGGAAAAGCAAACA...TGCCTTGATGTGTGTGAGAGCATCCATCCGTGTGGATTGTGTCCTTCTCAATGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043757.15 |
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| CDS-3UTR CAA 90 bp | GAGTCAGTAGTACCCTTCCAAAAGGAGGGACCAGGGTCAGTTCTGAGTGGCAAAATGCATTTTCTAACATaGCCTGGCGGGAAGACACCT | + |
|
Preference number: 5 (lower is better) Translates to: ESVVPFQKEGPGSVLSGKMHFLT*PGGKTP Trigger: AGGTGTCTTCCCGCCAGGCAATGTTAGAAAATGCAT...TTTGCCACTCAGAACTGACCCTGGTCCCTCCTTTTGGAAGGGTACTACTGACTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000043757.15 |
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| CDS CCA 90 bp | TCAGATGCATTTTCTAACATTGCCTGGCGGGAAGACACCTCTGCCTaGGACACAGAGAAGTCGTTTTCTGCAGCATTAGCTGCTTTCAAT | + |
|
Preference number: 5 (lower is better) Translates to: SDAFSNIAWREDTSA*DTEKSFSAALAAFN Trigger: ATTGAAAGCAGCTAATGCTGCAGAAAACGACTTCTCTGTGTCCCAGGCAGAGGTGTCTTCCCGCCAGGCAATGTTAGAAAATGCATCTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043757.15 |
||
| CDS CCA 90 bp | CCGGCTACTATGTACAGGTCAGCATTGACGAATAGCTCCTTGCCGTaGGCGGAGATGCTGAACTTTTCCAACTTAATGTCAGATGCATTT | + |
|
Preference number: 5 (lower is better) Translates to: PATMYRSALTNSSLP*AEMLNFSNLMSDAF Trigger: AAATGCATCTGACATTAAGTTGGAAAAGTTCAGCATCTCCGCCCACGGCAAGGAGCTATTCGTCAATGCTGACCTGTACATAGTAGCCGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043757.15 |
||
| CDS-3UTR CAA 90 bp | ATTGAGAAGGACACAATCCACACGGATGGATGCTCTCACACACATCAAGGCAACCAGGACTTCCTTTGTTaGCTTTTCCGCTTGCTTGGT | + |
|
Preference number: 5 (lower is better) Translates to: IEKDTIHTDGCSHTHQGNQDFLC*LFRLLG Trigger: ACCAAGCAAGCGGAAAAGCAAACAAAGGAAGTCCTG...GTTGCCTTGATGTGTGTGAGAGCATCCATCCGTGTGGATTGTGTCCTTCTCAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043757.15 |
||
| CDS-3UTR CAA 90 bp | ATTGAGAAGGACACAATCCACACGGATGGATGCTCTCACACACATCAAGGCAACTCTATGTCCAAGTTATaGGTTGGTTCATCCAAGATG | + |
|
Preference number: 5 (lower is better) Translates to: IEKDTIHTDGCSHTHQGNSMSKL*VGSSKM Trigger: CATCTTGGATGAACCAACCAATAACTTGGACATAGA...GTTGCCTTGATGTGTGTGAGAGCATCCATCCGTGTGGATTGTGTCCTTCTCAAT 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043757.15 |
||
| CDS GCA 72 bp | CTCAGGGTCGAAGCCCAAGCCAGCCAGGATCCGCCGTaGCTTGGCCTCTGCAGCTGCTGCCCCGGTAGCTCG | + |
|
Preference number: 6 (lower is better) Translates to: LRVEAQASQDPP*LGLCSCCPGSS Trigger: CGAGCTACCGGGGCAGCAGCTGCAGAGGCCAAGGCACGGCGGATCCTGGCTGGCTTGGGCTTCGACCCTGAG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043757.15 |
||
| CDS GCA 72 bp | GCCCAAGCCAGCCAGGATCCGCCGTGCCTTGGCCTCTaGAGCTGCTGCCCCGGTAGCTCGCAGTTCCTCATA | + |
|
Preference number: 6 (lower is better) Translates to: AQASQDPPCLGL*SCCPGSSQFLI Trigger: TATGAGGAACTGCGAGCTACCGGGGCAGCAGCTGCAGAGGCCAAGGCACGGCGGATCCTGGCTGGCTTGGGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043757.15 |
||
| CDS GCA 72 bp | GCCAGCCAGGATCCGCCGTGCCTTGGCCTCTGCAGCTaGTGCCCCGGTAGCTCGCAGTTCCTCATACACCTT | + |
|
Preference number: 6 (lower is better) Translates to: ASQDPPCLGLCS*CPGSSQFLIHL Trigger: AAGGTGTATGAGGAACTGCGAGCTACCGGGGCAGCAGCTGCAGAGGCCAAGGCACGGCGGATCCTGGCTGGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043757.15 |
||
| CDS CAA 90 bp | TGCATCTCAGGGTCGAAGCCCAAGCCAGCCAGGATCCGCCGTGCCTaGGCCTCTGCAGCTGCTGCCCCGGTAGCTCGCAGTTCCTCATAC | + |
|
Preference number: 6 (lower is better) Translates to: CISGSKPKPARIRRA*ASAAAAPVARSSSY Trigger: GTATGAGGAACTGCGAGCTACCGGGGCAGCAGCTGCAGAGGCCAAGGCACGGCGGATCCTGGCTGGCTTGGGCTTCGACCCTGAGATGCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043757.15 |
||
| CDS CCA 72 bp | CCACCGGAGAGTTTGCAGATCTGGATGGTGTGGGCGTaGCTCTCCAGGCCAAAGCGGCCCAAGCACTTCCGG | + |
|
Preference number: 6 (lower is better) Translates to: PPESLQIWMVWA*LSRPKRPKHFR Trigger: CCGGAAGTGCTTGGGCCGCTTTGGCCTGGAGAGCCACGCCCACACCATCCAGATCTGCAAACTCTCCGGTGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043757.15 |
||
| CDS CCA 72 bp | GGGCTTTCTGCCCACCGGAGAGTTTGCAGATCTGGATaGTGTGGGCGTGGCTCTCCAGGCCAAAGCGGCCCA | + |
|
Preference number: 6 (lower is better) Translates to: GLSAHRRVCRSG*CGRGSPGQSGP Trigger: TGGGCCGCTTTGGCCTGGAGAGCCACGCCCACACCATCCAGATCTGCAAACTCTCCGGTGGGCAGAAAGCCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043757.15 |
||
| CDS TCA 72 bp | GGCCCAAGCACTTCCGGGCATCCTGGTAGGGCAGATTaGAGCTCCGCTGCAGGTACTCAGTGGGCGTCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: GPSTSGHPGRAD*SSAAGTQWASP Trigger: AGGAGACGCCCACTGAGTACCTGCAGCGGAGCTTCAATCTGCCCTACCAGGATGCCCGGAAGTGCTTGGGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043757.15 |
||
| CDS CCA 72 bp | ACTCGGGCTTTCTGCCCACCGGAGAGTTTGCAGATCTaGATGGTGTGGGCGTGGCTCTCCAGGCCAAAGCGG | + |
|
Preference number: 6 (lower is better) Translates to: TRAFCPPESLQI*MVWAWLSRPKR Trigger: CCGCTTTGGCCTGGAGAGCCACGCCCACACCATCCAGATCTGCAAACTCTCCGGTGGGCAGAAAGCCCGAGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043757.15 |
||
| CDS GCA 72 bp | GGGCACGGTTGGCAATGTGCTTCAGAAGCGTGGTTTTaGCTTTGCCGTTGGGTCCCACCAGCCCATAGCGGC | + |
|
Preference number: 6 (lower is better) Translates to: GHGWQCASEAWF*LCRWVPPAHSG Trigger: GCCGCTATGGGCTGGTGGGACCCAACGGCAAAGGCAAAACCACGCTTCTGAAGCACATTGCCAACCGTGCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043757.15 |
||
| CDS GCA 72 bp | CTCCAACCCCCAGAGAACTTCTGTGTGGGCCGATTCTaGATCTCAGGGTCGAAGCCCAAGCCAGCCAGGATC | + |
|
Preference number: 6 (lower is better) Translates to: LQPPENFCVGRF*ISGSKPKPARI Trigger: GATCCTGGCTGGCTTGGGCTTCGACCCTGAGATGCAGAATCGGCCCACACAGAAGTTCTCTGGGGGTTGGAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043757.15 |
||
| CDS GCA 72 bp | CTCCGCTGCAGGTACTCAGTGGGCGTCTCCTCCATGTaGAGCTGCTCTGCGTACTGCTGGTTAAAGAAGCCG | + |
|
Preference number: 6 (lower is better) Translates to: LRCRYSVGVSSM*SCSAYCWLKKP Trigger: CGGCTTCTTTAACCAGCAGTACGCAGAGCAGCTGCACATGGAGGAGACGCCCACTGAGTACCTGCAGCGGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043757.15 |
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| CDS CCA 72 bp | CAATGTGCTTCAGAAGCGTGGTTTTGCCTTTGCCGTTaGGTCCCACCAGCCCATAGCGGCGGCCGGCTACTA | + |
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Preference number: 6 (lower is better) Translates to: QCASEAWFCLCR*VPPAHSGGRLL Trigger: TAGTAGCCGGCCGCCGCTATGGGCTGGTGGGACCCAACGGCAAAGGCAAAACCACGCTTCTGAAGCACATTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043757.15 |
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| CDS CAA 72 bp | CTGACACCCTGCTCCTCCACCACCCACAACTGGCAGTaGGTTTCTGTGATGAGGCGCGCATCGTGGCTGACA | + |
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Preference number: 6 (lower is better) Translates to: LTPCSSTTHNWQ*VSVMRRASWLT Trigger: TGTCAGCCACGATGCGCGCCTCATCACAGAAACCAACTGCCAGTTGTGGGTGGTGGAGGAGCAGGGTGTCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043757.15 |
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| CDS GCA 72 bp | GGTTCTTCCTCATCTCCCCGTTGGTCGGTGTCAGCTTaGCAGTCAGCAGCAGGAGTAGTGTGCTCTTCCCCA | + |
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Preference number: 6 (lower is better) Translates to: GSSSSPRWSVSA*QSAAGVVCSSP Trigger: TGGGGAAGAGCACACTACTCCTGCTGCTGACTGGCAAGCTGACACCGACCAACGGGGAGATGAGGAAGAACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043757.15 |
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| CDS CCA 72 bp | TGCTCAGGGCACGGTTGGCAATGTGCTTCAGAAGCGTaGTTTTGCCTTTGCCGTTGGGTCCCACCAGCCCAT | + |
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Preference number: 6 (lower is better) Translates to: CSGHGWQCASEA*FCLCRWVPPAH Trigger: ATGGGCTGGTGGGACCCAACGGCAAAGGCAAAACCACGCTTCTGAAGCACATTGCCAACCGTGCCCTGAGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043757.15 |
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| CDS CAA 72 bp | GTCAGCAGCAGGAGTAGTGTGCTCTTCCCCACACCATaGGGACCCACGATGCAAATCCGGGAGTCCATGTCG | + |
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Preference number: 6 (lower is better) Translates to: VSSRSSVLFPTP*GPTMQIRESMS Trigger: CGACATGGACTCCCGGATTTGCATCGTGGGTCCCAATGGTGTGGGGAAGAGCACACTACTCCTGCTGCTGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043757.15 |
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| CDS CAA 72 bp | TGGTTCTTCCTCATCTCCCCGTTGGTCGGTGTCAGCTaGCCAGTCAGCAGCAGGAGTAGTGTGCTCTTCCCC | + |
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Preference number: 6 (lower is better) Translates to: WFFLISPLVGVS*PVSSRSSVLFP Trigger: GGGGAAGAGCACACTACTCCTGCTGCTGACTGGCAAGCTGACACCGACCAACGGGGAGATGAGGAAGAACCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043757.15 |
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| CDS CAA 90 bp | AGCTTGCCAGTCAGCAGCAGGAGTAGTGTGCTCTTCCCCACACCATaGGGACCCACGATGCAAATCCGGGAGTCCATGTCGATGCCGAAA | + |
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Preference number: 6 (lower is better) Translates to: SLPVSSRSSVLFPTP*GPTMQIRESMSMPK Trigger: TTTCGGCATCGACATGGACTCCCGGATTTGCATCGTGGGTCCCAATGGTGTGGGGAAGAGCACACTACTCCTGCTGCTGACTGGCAAGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043757.15 |
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| CDS CAA 90 bp | TTCAGCCGATGGTTCTTCCTCATCTCCCCGTTGGTCGGTGTCAGCTaGCCAGTCAGCAGCAGGAGTAGTGTGCTCTTCCCCACACCATTG | + |
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Preference number: 6 (lower is better) Translates to: FSRWFFLISPLVGVS*PVSSRSSVLFPTPL Trigger: CAATGGTGTGGGGAAGAGCACACTACTCCTGCTGCTGACTGGCAAGCTGACACCGACCAACGGGGAGATGAGGAAGAACCATCGGCTGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043757.15 |
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| CDS TCA 72 bp | CTCGCTTGTAGTCATCAAAGTCGCCGTCGATCTGACTaGCACCCTGCTCCTCCACCACCCACAACTGGCAGT | + |
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Preference number: 6 (lower is better) Translates to: LACSHQSRRRSD*HPAPPPPTTGS Trigger: ACTGCCAGTTGTGGGTGGTGGAGGAGCAGGGTGTCAGTCAGATCGACGGCGACTTTGATGACTACAAGCGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043757.15 |
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| CDS GCA 72 bp | TCGGTGTCAGCTTGCCAGTCAGCAGCAGGAGTAGTGTaGTCTTCCCCACACCATTGGGACCCACGATGCAAA | + |
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Preference number: 6 (lower is better) Translates to: SVSACQSAAGVV*SSPHHWDPRCK Trigger: TTTGCATCGTGGGTCCCAATGGTGTGGGGAAGAGCACACTACTCCTGCTGCTGACTGGCAAGCTGACACCGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043757.15 |
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| CDS CCA 72 bp | AGACACGCATTCTCCAACCCCCAGAGAACTTCTGTGTaGGCCGATTCTGCATCTCAGGGTCGAAGCCCAAGC | + |
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Preference number: 6 (lower is better) Translates to: RHAFSNPQRTSV*ADSASQGRSPS Trigger: GCTTGGGCTTCGACCCTGAGATGCAGAATCGGCCCACACAGAAGTTCTCTGGGGGTTGGAGAATGCGTGTCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043757.15 |
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| CDS CCA 72 bp | TCAGCAGCAGGAGTAGTGTGCTCTTCCCCACACCATTaGGACCCACGATGCAAATCCGGGAGTCCATGTCGA | + |
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Preference number: 6 (lower is better) Translates to: SAAGVVCSSPHH*DPRCKSGSPCR Trigger: TCGACATGGACTCCCGGATTTGCATCGTGGGTCCCAATGGTGTGGGGAAGAGCACACTACTCCTGCTGCTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043757.15 |
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| CDS CAA 72 bp | CCGATTTTCAGCCGATGGTTCTTCCTCATCTCCCCGTaGGTCGGTGTCAGCTTGCCAGTCAGCAGCAGGAGT | + |
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Preference number: 6 (lower is better) Translates to: PIFSRWFFLISP*VGVSLPVSSRS Trigger: ACTCCTGCTGCTGACTGGCAAGCTGACACCGACCAACGGGGAGATGAGGAAGAACCATCGGCTGAAAATCGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043757.15 |
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| CDS GCA 72 bp | GTGGGCGTCTCCTCCATGTGCAGCTGCTCTGCGTACTaGTGGTTAAAGAAGCCGATTTTCAGCCGATGGTTC | + |
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Preference number: 6 (lower is better) Translates to: VGVSSMCSCSAY*WLKKPIFSRWF Trigger: GAACCATCGGCTGAAAATCGGCTTCTTTAACCAGCAGTACGCAGAGCAGCTGCACATGGAGGAGACGCCCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043757.15 |
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| CDS GCA 72 bp | GTACTCAGTGGGCGTCTCCTCCATGTGCAGCTGCTCTaGGTACTGCTGGTTAAAGAAGCCGATTTTCAGCCG | + |
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Preference number: 6 (lower is better) Translates to: VLSGRLLHVQLL*VLLVKEADFQP Trigger: CGGCTGAAAATCGGCTTCTTTAACCAGCAGTACGCAGAGCAGCTGCACATGGAGGAGACGCCCACTGAGTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043757.15 |
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| CDS CCA 72 bp | CGATTTTCAGCCGATGGTTCTTCCTCATCTCCCCGTTaGTCGGTGTCAGCTTGCCAGTCAGCAGCAGGAGTA | + |
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Preference number: 6 (lower is better) Translates to: RFSADGSSSSPR*SVSACQSAAGV Trigger: TACTCCTGCTGCTGACTGGCAAGCTGACACCGACCAACGGGGAGATGAGGAAGAACCATCGGCTGAAAATCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043757.15 |
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| CDS TCA 72 bp | CCCTGTAGTAATGGAGCCGCTGGGTGTCCAGGTGGATaGTATCAGTGCAAACGTCATCCAGAAAGCCCTGGT | + |
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Preference number: 6 (lower is better) Translates to: PCSNGAAGCPGG*YQCKRHPESPG Trigger: ACCAGGGCTTTCTGGATGACGTTTGCACTGATATCATCCACCTGGACACCCAGCGGCTCCATTACTACAGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043757.15 |
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| CDS GCA 72 bp | GTAGTGTGCTCTTCCCCACACCATTGGGACCCACGATaGAAATCCGGGAGTCCATGTCGATGCCGAAATCTA | + |
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Preference number: 6 (lower is better) Translates to: VVCSSPHHWDPR*KSGSPCRCRNL Trigger: TAGATTTCGGCATCGACATGGACTCCCGGATTTGCATCGTGGGTCCCAATGGTGTGGGGAAGAGCACACTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043757.15 |
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| CDS GCA 72 bp | TGCAGGTACTCAGTGGGCGTCTCCTCCATGTGCAGCTaGTCTGCGTACTGCTGGTTAAAGAAGCCGATTTTC | + |
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Preference number: 6 (lower is better) Translates to: CRYSVGVSSMCS*SAYCWLKKPIF Trigger: GAAAATCGGCTTCTTTAACCAGCAGTACGCAGAGCAGCTGCACATGGAGGAGACGCCCACTGAGTACCTGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043757.15 |
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| CDS CCA 72 bp | GCGTACTGCTGGTTAAAGAAGCCGATTTTCAGCCGATaGTTCTTCCTCATCTCCCCGTTGGTCGGTGTCAGC | + |
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Preference number: 6 (lower is better) Translates to: AYCWLKKPIFSR*FFLISPLVGVS Trigger: GCTGACACCGACCAACGGGGAGATGAGGAAGAACCATCGGCTGAAAATCGGCTTCTTTAACCAGCAGTACGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043757.15 |
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| CDS CAA 72 bp | CGAGTCAGGACTTCCTTTGTTTGCTTTTCCGCTTGCTaGGTGGACTTGCCCCCAGCCTTCAGCTCCTTCAGT | + |
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Preference number: 6 (lower is better) Translates to: RVRTSFVCFSAC*VDLPPAFSSFS Trigger: ACTGAAGGAGCTGAAGGCTGGGGGCAAGTCCACCAAGCAAGCGGAAAAGCAAACAAAGGAAGTCCTGACTCG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043757.15 |
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| CDS CAA 90 bp | TTAAAGAAGCCGATTTTCAGCCGATGGTTCTTCCTCATCTCCCCGTaGGTCGGTGTCAGCTTGCCAGTCAGCAGCAGGAGTAGTGTGCTC | + |
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Preference number: 6 (lower is better) Translates to: LKKPIFSRWFFLISP*VGVSLPVSSRSSVL Trigger: GAGCACACTACTCCTGCTGCTGACTGGCAAGCTGACACCGACCAACGGGGAGATGAGGAAGAACCATCGGCTGAAAATCGGCTTCTTTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043757.15 |
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| CDS CCA 72 bp | GAGTCAGGACTTCCTTTGTTTGCTTTTCCGCTTGCTTaGTGGACTTGCCCCCAGCCTTCAGCTCCTTCAGTT | + |
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Preference number: 6 (lower is better) Translates to: ESGLPLFAFPLA*WTCPQPSAPSV Trigger: AACTGAAGGAGCTGAAGGCTGGGGGCAAGTCCACCAAGCAAGCGGAAAAGCAAACAAAGGAAGTCCTGACTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043757.15 |
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| CDS CAA 72 bp | GTCGGCACTTCTGCTGTTTTCGAGTCAGGACTTCCTTaGTTTGCTTTTCCGCTTGCTTGGTGGACTTGCCCC | + |
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Preference number: 6 (lower is better) Translates to: VGTSAVFESGLP*FAFPLAWWTCP Trigger: GGGGCAAGTCCACCAAGCAAGCGGAAAAGCAAACAAAGGAAGTCCTGACTCGAAAACAGCAGAAGTGCCGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043757.15 |
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| CDS CAA 90 bp | CGGCGGCCGGCTACTATGTACAGGTCAGCATTGACGAATAGCTCCTaGCCGTGGGCGGAGATGCTGAACTTTTCCAACTTAATGTCAGAT | + |
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Preference number: 6 (lower is better) Translates to: RRPATMYRSALTNSS*PWAEMLNFSNLMSD Trigger: ATCTGACATTAAGTTGGAAAAGTTCAGCATCTCCGCCCACGGCAAGGAGCTATTCGTCAATGCTGACCTGTACATAGTAGCCGGCCGCCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043757.15 |
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| CDS CCA 72 bp | TTCCTCAGCCACGGCTTTATTGATGCGATTCTTCTCTaGCTTGGCGGGCTTGAGAACACGGTTTTCTTCCTC | + |
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Preference number: 6 (lower is better) Translates to: FLSHGFIDAILL*LGGLENTVFFL Trigger: GAGGAAGAAAACCGTGTTCTCAAGCCCGCCAAGCCAGAGAAGAATCGCATCAATAAAGCCGTGGCTGAGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043757.15 |
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| CDS CAA 72 bp | CACCTCATCTTCCTCATCACTGGCTGGCACAGACAGTaGCTTAAGTCGCTCCATGAGCACTCTCTCATCACT | + |
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Preference number: 6 (lower is better) Translates to: HLIFLITGWHRQ*LKSLHEHSLIT Trigger: AGTGATGAGAGAGTGCTCATGGAGCGACTTAAGCAACTGTCTGTGCCAGCCAGTGATGAGGAAGATGAGGTG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043757.15 |
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| CDS CAA 72 bp | TCAGCCACGGCTTTATTGATGCGATTCTTCTCTGGCTaGGCGGGCTTGAGAACACGGTTTTCTTCCTCCTCT | + |
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Preference number: 6 (lower is better) Translates to: SATALLMRFFSG*AGLRTRFSSSS Trigger: AGAGGAGGAAGAAAACCGTGTTCTCAAGCCCGCCAAGCCAGAGAAGAATCGCATCAATAAAGCCGTGGCTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043757.15 |
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| CDS CAA 72 bp | TCCCCCAGGGCATCGATGGACTCTATGTCCAAGTTATaGGTTGGTTCATCCAAGATGAGGACATCAGGCTCC | + |
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Preference number: 6 (lower is better) Translates to: SPRASMDSMSKL*VGSSKMRTSGS Trigger: GGAGCCTGATGTCCTCATCTTGGATGAACCAACCAATAACTTGGACATAGAGTCCATCGATGCCCTGGGGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043757.15 |
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| CDS GCA 72 bp | ACCTCATCTTCCTCATCACTGGCTGGCACAGACAGTTaGTTAAGTCGCTCCATGAGCACTCTCTCATCACTA | + |
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Preference number: 6 (lower is better) Translates to: TSSSSSLAGTDS*LSRSMSTLSSL Trigger: TAGTGATGAGAGAGTGCTCATGGAGCGACTTAAGCAACTGTCTGTGCCAGCCAGTGATGAGGAAGATGAGGT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043757.15 |
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| CDS CAA 72 bp | GCTACTATGTACAGGTCAGCATTGACGAATAGCTCCTaGCCGTGGGCGGAGATGCTGAACTTTTCCAACTTA | + |
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Preference number: 6 (lower is better) Translates to: ATMYRSALTNSS*PWAEMLNFSNL Trigger: TAAGTTGGAAAAGTTCAGCATCTCCGCCCACGGCAAGGAGCTATTCGTCAATGCTGACCTGTACATAGTAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043757.15 |
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| CDS CCA 72 bp | ATGTACAGGTCAGCATTGACGAATAGCTCCTTGCCGTaGGCGGAGATGCTGAACTTTTCCAACTTAATGTCA | + |
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Preference number: 6 (lower is better) Translates to: MYRSALTNSSLP*AEMLNFSNLMS Trigger: TGACATTAAGTTGGAAAAGTTCAGCATCTCCGCCCACGGCAAGGAGCTATTCGTCAATGCTGACCTGTACAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043757.15 |
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