Pregenerated sensors for ABCD3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028127Ensembl transcript IDs: ENSMUST00000029770.8, ENSMUST00000197383.5, ENSMUST00000197662.5
Found 156 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GCATCCTTCCACTTTGGTAGTAATCCTCCAGCAGCTCTGAGTGTGTaGTGTGAAGGTGGCGAGGGTGTGCCAGATCTAGGAAGGGGCGAC | + |
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Preference number: 1 (lower is better) Translates to: ASFHFGSNPPAALSV*CEGGEGVPDLGRGD Trigger: GTCGCCCCTTCCTAGATCTGGCACACCCTCGCCACCTTCACAGCACACACTCAGAGCTGCTGGAGGATTACTACCAAAGTGGAAGGATGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197662.5 |
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| 3UTR TCA 90 bp | GATAAAACAGTCTTGCCATCGCCATTCTTTGTTTCTCTCCTCCGCTaGGTACATCCATCCAGTCCTGAACACTGTCCCAGCCGCCTTCTC | + |
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Preference number: 1 (lower is better) Translates to: DKTVLPSPFFVSLLR*VHPSSPEHCPSRLL Trigger: GAGAAGGCGGCTGGGACAGTGTTCAGGACTGGATGGATGTACTCAGCGGAGGAGAGAAACAAAGAATGGCGATGGCAAGACTGTTTTATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197662.5 |
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| 3UTR TCA 90 bp | CATATGCAGGTAGTACTCGTGGTGCTTCCAAAGGGACTTTCTGTGTaGAACGGTAAAGAGGGTGATGCCAACCTTTCGACAGTGGCTGTA | + |
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Preference number: 1 (lower is better) Translates to: HMQVVLVVLPKGLSV*NGKEGDANLSTVAV Trigger: TACAGCCACTGTCGAAAGGTTGGCATCACCCTCTTTACCGTTTCACACAGAAAGTCCCTTTGGAAGCACCACGAGTACTACCTGCATATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197662.5 |
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| 3UTR TCA 90 bp | TTGCTGCTGCGACCAATGATGCCACTCTCAATGAGCGTCCCATTCTaGATCATCCAAACATCACAGTATGTTCGAGATACCAGCATAACC | + |
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Preference number: 1 (lower is better) Translates to: LLLRPMMPLSMSVPF*IIQTSQYVRDTSIT Trigger: GGTTATGCTGGTATCTCGAACATACTGTGATGTTTGGATGATTCAGAATGGGACGCTCATTGAGAGTGGCATCATTGGTCGCAGCAGCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197662.5 |
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| 3UTR TCA 90 bp | CAACCTTTCGACAGTGGCTGTAAATGTAGTCCTCCACATCCACACTaGCCGCACTTGTGCATTCATCCAAAATGGCAAACTGGGGTTTAT | + |
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Preference number: 1 (lower is better) Translates to: QPFDSGCKCSPPHPH*PHLCIHPKWQTGVY Trigger: ATAAACCCCAGTTTGCCATTTTGGATGAATGCACAAGTGCGGTCAGTGTGGATGTGGAGGACTACATTTACAGCCACTGTCGAAAGGTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000197662.5 |
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| 3UTR TCA 90 bp | GAGACTGTCCATCTCTTCACAAAATCCAAAATCCTCCTAAGACCTTaGGCTTCACACAGGAGATTATGTCTGAACATTCCAAACACTGGT | + |
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Preference number: 1 (lower is better) Translates to: ETVHLFTKSKILLRP*ASHRRLCLNIPNTG Trigger: ACCAGTGTTTGGAATGTTCAGACATAATCTCCTGTGTGAAGCTCAAGGTCTTAGGAGGATTTTGGATTTTGTGAAGAGATGGACAGTCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029770.8 ENSMUST00000197383.5 |
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| 3UTR GCA 90 bp | GTGATAAGCCGTGAATTCACGTATCTGTATTCTCCTTCGTACTTCTaGTCCATAATTGTCATCTTACCAATGGGTCTTCTGAGTCGAGTT | + |
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Preference number: 1 (lower is better) Translates to: VISREFTYLYSPSYF*SIIVILPMGLLSRV Trigger: AACTCGACTCAGAAGACCCATTGGTAAGATGACAATTATGGAGCAGAAGTACGAAGGAGAATACAGATACGTGAATTCACGGCTTATCAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197662.5 |
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| 3UTR TCA 90 bp | CGAACGCTATCCTGTAACGATGGAATATGTTTCAATAAAACATTGTaGTTGGTCTGGTTCCCACTACCATGGGGCATAAGAAATGAAACT | + |
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Preference number: 1 (lower is better) Translates to: RTLSCNDGICFNKTL*LVWFPLPWGIRNET Trigger: AGTTTCATTTCTTATGCCCCATGGTAGTGGGAACCAGACCAATCACAATGTTTTATTGAAACATATTCCATCGTTACAGGATAGCGTTCG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029770.8 ENSMUST00000197383.5 |
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| 3UTR CCA 90 bp | AAAGAAAAAGACAGAGCCATAAAAGTCAAATTAGCTGACTTCAAATaGTTTACATCCCAGGATGAATCAGGTTACACTGATTTAAGCCCA | + |
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Preference number: 1 (lower is better) Translates to: KEKDRAIKVKLADFK*FTSQDESGYTDLSP Trigger: TGGGCTTAAATCAGTGTAACCTGATTCATCCTGGGATGTAAACCATTTGAAGTCAGCTAATTTGACTTTTATGGCTCTGTCTTTTTCTTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029770.8 ENSMUST00000197383.5 ENSMUST00000197662.5 |
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| 3UTR-3UTR TCA 90 bp | CGAGGGTGTGCCAGATCTAGGAAGGGGCGACTGACAACCAGGTACCCGACGACATACCAATGGGTCTTCTaGGTCGAGTTAGGAATAGCC | + |
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Preference number: 2 (lower is better) Translates to: RGCARSRKGRLTTRYPTTYQWVF*VELGIA Trigger: GGCTATTCCTAACTCGACTCAGAAGACCCATTGGTA...TGTCGTCGGGTACCTGGTTGTCAGTCGCCCCTTCCTAGATCTGGCACACCCTCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197662.5 |
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| 3UTR-3UTR TCA 90 bp | CGAGGGTGTGCCAGATCTAGGAAGGGGCGACTGACAACCAGGTACCCGACGACAAAACAGGGTTCTTCATaGAAGAAAAAGACAGAGCCA | + |
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Preference number: 2 (lower is better) Translates to: RGCARSRKGRLTTRYPTTKQGSS*KKKTEP Trigger: TGGCTCTGTCTTTTTCTTTCATGAAGAACCCTGTTT...TGTCGTCGGGTACCTGGTTGTCAGTCGCCCCTTCCTAGATCTGGCACACCCTCG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000197662.5 |
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| 3UTR-3UTR CCA 90 bp | CCCAGAAACAAGCAAGTAGGCCATCATGCTTGCCGGGCCCTGAGCTCCAATTGCTGTAAGCAGCTGGTCTaGATTTGCTATTCTGTTATC | + |
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Preference number: 2 (lower is better) Translates to: PRNKQVGHHACRALSSNCCKQLV*ICYSVI Trigger: GATAACAGAATAGCAAATCCAGACCAGCTGCTTACA...GCAATTGGAGCTCAGGGCCCGGCAAGCATGATGGCCTACTTGCTTGTTTCTGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197662.5 |
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| 3UTR-3UTR TCA 90 bp | GTCCAGGAGTCAGAGACCGTTCCTAGGAAATGTCATTCACCCATGTGCATGAGACACTGCTGTGCACCATaGGAACCTTCAAAACAACTC | + |
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Preference number: 2 (lower is better) Translates to: VQESETVPRKCHSPMCMRHCCAP*EPSKQL Trigger: GAGTTGTTTTGAAGGTTCTCATGGTGCACAGCAGTG...TCTCATGCACATGGGTGAATGACATTTCCTAGGAACGGTCTCTGACTCCTGGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029770.8 ENSMUST00000197383.5 |
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| 3UTR-3UTR TCA 90 bp | AGTAATCCTCCAGCAGCTCTGAGTGTGTGCTGTGAAGGTGGCGAGGGTGTGCCATGGCTTACTAAGATTTaGATACAGATCGACTACACT | + |
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Preference number: 2 (lower is better) Translates to: SNPPAALSVCCEGGEGVPWLTKI*IQIDYT Trigger: AGTGTAGTCGATCTGTATTCAAATCTTAGTAAGCCA...TGGCACACCCTCGCCACCTTCACAGCACACACTCAGAGCTGCTGGAGGATTACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197662.5 |
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| 3UTR CAA 90 bp | AAGAGGGAGCTCTTTCCACAGCCGTTTGGACCACAAATCAGAACGTaGGCCCCAGATCGAACTTCAAAACTAAGGTCTTGGATCAAGATG | + |
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Preference number: 2 (lower is better) Translates to: KRELFPQPFGPQIRT*APDRTSKLRSWIKM Trigger: CATCTTGATCCAAGACCTTAGTTTTGAAGTTCGATCTGGGGCCAACGTTCTGATTTGTGGTCCAAACGGCTGTGGAAAGAGCTCCCTCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000197662.5 |
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| 3UTR-3UTR TCA 90 bp | CTCCAAAAAGAGGCCATAACTCACCAAGAACACGGAAGAGGGAGCTCTTTCCACCTCGGAAGCACAGTTTaGGCTCATTTAACCCATACT | + |
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Preference number: 2 (lower is better) Translates to: LQKEAITHQEHGRGSSFHLGSTV*AHLTHT Trigger: AGTATGGGTTAAATGAGCTCAAACTGTGCTTCCGAG...GTGGAAAGAGCTCCCTCTTCCGTGTTCTTGGTGAGTTATGGCCTCTTTTTGGAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000197662.5 |
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| 3UTR CAA 90 bp | AGAGGCATGGCAGCGATGAAGTTGAATAAGTATCTCTTGAAATCTTaGCTGCTGCGACCAATGATGCCACTCTCAATGAGCGTCCCATTC | + |
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Preference number: 2 (lower is better) Translates to: RGMAAMKLNKYLLKS*LLRPMMPLSMSVPF Trigger: GAATGGGACGCTCATTGAGAGTGGCATCATTGGTCGCAGCAGCAAAGATTTCAAGAGATACTTATTCAACTTCATCGCTGCCATGCCTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197662.5 |
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| 3UTR-3UTR TCA 90 bp | TTCTCCAGCACCAGGGACCAAGGGACTAGCTTGTGCTCCTTCAATACCCTTCTCATGGGGCATAAGAAATaGAACTCAAGACTACTTTGT | + |
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Preference number: 2 (lower is better) Translates to: FSSTRDQGTSLCSFNTLLMGHKK*NSRLLC Trigger: ACAAAGTAGTCTTGAGTTTCATTTCTTATGCCCCAT...GAGAAGGGTATTGAAGGAGCACAAGCTAGTCCCTTGGTCCCTGGTGCTGGAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197662.5 |
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| 3UTR-3UTR TCA 90 bp | GTCCAGGAGTCAGAGACCGTTCCTAGGAAATGTCATTCACCCATGTGCATGAGAACAGGAGATTATGTCTaGACATTCCAAACACTGGTC | + |
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Preference number: 2 (lower is better) Translates to: VQESETVPRKCHSPMCMRTGDYV*TFQTLV Trigger: GACCAGTGTTTGGAATGTTCAGACATAATCTCCTGT...TCTCATGCACATGGGTGAATGACATTTCCTAGGAACGGTCTCTGACTCCTGGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029770.8 ENSMUST00000197383.5 |
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| 3UTR-3UTR TCA 90 bp | TTCTCCAGCACCAGGGACCAAGGGACTAGCTTGTGCTCCTTCAATACCCTTCTCCCATTTTATAATAGGTaGAAGCTTGGAGATACTCCT | + |
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Preference number: 2 (lower is better) Translates to: FSSTRDQGTSLCSFNTLLPFYNR*KLGDTP Trigger: AGGAGTATCTCCAAGCTTTCACCTATTATAAAATGG...GAGAAGGGTATTGAAGGAGCACAAGCTAGTCCCTTGGTCCCTGGTGCTGGAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197662.5 |
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| 3UTR-3UTR GCA 90 bp | TTATGTCTGAACATTCCAAACACTGGTCAGACTGGTACAACAGGTAGCAACCACGGCTGTAAGCACGGCTaGATACACACTGTTGTACAC | + |
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Preference number: 2 (lower is better) Translates to: LCLNIPNTGQTGTTGSNHGCKHG*IHTVVH Trigger: GTGTACAACAGTGTGTATGCAGCCGTGCTTACAGCC...GTGGTTGCTACCTGTTGTACCAGTCTGACCAGTGTTTGGAATGTTCAGACATAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029770.8 ENSMUST00000197383.5 |
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| 3UTR-3UTR GCA 90 bp | CCTGTTGTGACACCATTGTACGTTCATATCTGCCATGATTTAAGTCCTTTAGTAGCAGCTCTGAGTGTGTaGTGTGAAGGTGGCGAGGGT | + |
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Preference number: 2 (lower is better) Translates to: PVVTPLYVHICHDLSPLVAALSV*CEGGEG Trigger: ACCCTCGCCACCTTCACAGCACACACTCAGAGCTGC...TACTAAAGGACTTAAATCATGGCAGATATGAACGTACAATGGTGTCACAACAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197662.5 |
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| 3UTR-3UTR TCA 90 bp | TTATGTCTGAACATTCCAAACACTGGTCAGACTGGTACAACAGGTAGCAACCACCTCAGTCCAGCGGACTaGGACAGGTACATTTATTGT | + |
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Preference number: 2 (lower is better) Translates to: LCLNIPNTGQTGTTGSNHLSPAD*DRYIYC Trigger: ACAATAAATGTACCTGTCTCAGTCCGCTGGACTGAG...GTGGTTGCTACCTGTTGTACCAGTCTGACCAGTGTTTGGAATGTTCAGACATAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029770.8 ENSMUST00000197383.5 |
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| 3UTR-3UTR TCA 90 bp | CAGCCGTTTGGACCACAAATCAGAACGTTGGCCCCAGATCGAACTTCAAAACTAATACGACCCAAAGCTTaGGACATTCTCAAAAGCATC | + |
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Preference number: 2 (lower is better) Translates to: QPFGPQIRTLAPDRTSKLIRPKA*DILKSI Trigger: GATGCTTTTGAGAATGTCTCAAGCTTTGGGTCGTAT...TAGTTTTGAAGTTCGATCTGGGGCCAACGTTCTGATTTGTGGTCCAAACGGCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000197662.5 |
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| 3UTR-3UTR GCA 90 bp | CAGCCGTTTGGACCACAAATCAGAACGTTGGCCCCAGATCGAACTTCAAAACTACAGCTGGTCTGGATTTaGTATTCTGTTATCCAGGTT | + |
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Preference number: 2 (lower is better) Translates to: QPFGPQIRTLAPDRTSKLQLVWI*YSVIQV Trigger: AACCTGGATAACAGAATAGCAAATCCAGACCAGCTG...TAGTTTTGAAGTTCGATCTGGGGCCAACGTTCTGATTTGTGGTCCAAACGGCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000197662.5 |
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| 3UTR-3UTR CCA 90 bp | TTATGTCTGAACATTCCAAACACTGGTCAGACTGGTACAACAGGTAGCAACCACCCCAAATGGCTCTCCTaGAGTCCAATGCACTTAAAG | + |
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Preference number: 2 (lower is better) Translates to: LCLNIPNTGQTGTTGSNHPKWLS*SPMHLK Trigger: CTTTAAGTGCATTGGACTCCAGGAGAGCCATTTGGG...GTGGTTGCTACCTGTTGTACCAGTCTGACCAGTGTTTGGAATGTTCAGACATAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029770.8 ENSMUST00000197383.5 |
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| 3UTR CAA 90 bp | AGAGAGATAAGAGGCATGGCAGCGATGAAGTTGAATAAGTATCTCTaGAAATCTTTGCTGCTGCGACCAATGATGCCACTCTCAATGAGC | + |
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Preference number: 2 (lower is better) Translates to: REIRGMAAMKLNKYL*KSLLLRPMMPLSMS Trigger: GCTCATTGAGAGTGGCATCATTGGTCGCAGCAGCAAAGATTTCAAGAGATACTTATTCAACTTCATCGCTGCCATGCCTCTTATCTCTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197662.5 |
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| 3UTR-3UTR TCA 90 bp | CAAACCGATTTCACAACTACGTATGATCACGTTCACTCTCAGCCCTCCTTTGTGACAGGAGATTATGTCTaGACATTCCAAACACTGGTC | + |
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Preference number: 2 (lower is better) Translates to: QTDFTTTYDHVHSQPSFVTGDYV*TFQTLV Trigger: GACCAGTGTTTGGAATGTTCAGACATAATCTCCTGT...CACAAAGGAGGGCTGAGAGTGAACGTGATCATACGTAGTTGTGAAATCGGTTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029770.8 ENSMUST00000197383.5 |
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| 3UTR-3UTR TCA 90 bp | CCACTCAATCAAACCGATTTCACAACTACGTATGATCACGTTCACTCTCAGCCCATTCACCCATGTGCATaGGAATGGCTTAGCAGTTTT | + |
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Preference number: 2 (lower is better) Translates to: PLNQTDFTTTYDHVHSQPIHPCA*EWLSSF Trigger: AAAACTGCTAAGCCATTCTCATGCACATGGGTGAAT...GGGCTGAGAGTGAACGTGATCATACGTAGTTGTGAAATCGGTTTGATTGAGTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029770.8 ENSMUST00000197383.5 |
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| 3UTR-3UTR GCA 90 bp | AATCCTCCTAAGACCTTGAGCTTCACACAGGAGATTATGTCTGAACATTCCAAAGGCTGTAAGCACGGCTaGATACACACTGTTGTACAC | + |
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Preference number: 2 (lower is better) Translates to: NPPKTLSFTQEIMSEHSKGCKHG*IHTVVH Trigger: GTGTACAACAGTGTGTATGCAGCCGTGCTTACAGCC...TTTGGAATGTTCAGACATAATCTCCTGTGTGAAGCTCAAGGTCTTAGGAGGATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029770.8 ENSMUST00000197383.5 |
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| 3UTR-3UTR CCA 90 bp | GTCCAGGAGTCAGAGACCGTTCCTAGGAAATGTCATTCACCCATGTGCATGAGATTAGCTGACTTCAAATaGTTTACATCCCAGGATGAA | + |
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Preference number: 2 (lower is better) Translates to: VQESETVPRKCHSPMCMRLADFK*FTSQDE Trigger: TTCATCCTGGGATGTAAACCATTTGAAGTCAGCTAA...TCTCATGCACATGGGTGAATGACATTTCCTAGGAACGGTCTCTGACTCCTGGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029770.8 ENSMUST00000197383.5 |
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| 3UTR-3UTR CCA 90 bp | CTCCAAAAAGAGGCCATAACTCACCAAGAACACGGAAGAGGGAGCTCTTTCCACATAAAACATTGTGATTaGTCTGGTTCCCACTACCAT | + |
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Preference number: 2 (lower is better) Translates to: LQKEAITHQEHGRGSSFHIKHCD*SGSHYH Trigger: ATGGTAGTGGGAACCAGACCAATCACAATGTTTTAT...GTGGAAAGAGCTCCCTCTTCCGTGTTCTTGGTGAGTTATGGCCTCTTTTTGGAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000197662.5 |
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| 3UTR-3UTR TCA 90 bp | AATCCTCCTAAGACCTTGAGCTTCACACAGGAGATTATGTCTGAACATTCCAAACTCAGTCCAGCGGACTaGGACAGGTACATTTATTGT | + |
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Preference number: 2 (lower is better) Translates to: NPPKTLSFTQEIMSEHSKLSPAD*DRYIYC Trigger: ACAATAAATGTACCTGTCTCAGTCCGCTGGACTGAG...TTTGGAATGTTCAGACATAATCTCCTGTGTGAAGCTCAAGGTCTTAGGAGGATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029770.8 ENSMUST00000197383.5 |
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| 3UTR-3UTR TCA 90 bp | ATCCAAAATCCTCCTAAGACCTTGAGCTTCACACAGGAGATTATGTCTGAACATCACTGCTGTGCACCATaGGAACCTTCAAAACAACTC | + |
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Preference number: 2 (lower is better) Translates to: IQNPPKTLSFTQEIMSEHHCCAP*EPSKQL Trigger: GAGTTGTTTTGAAGGTTCTCATGGTGCACAGCAGTG...ATGTTCAGACATAATCTCCTGTGTGAAGCTCAAGGTCTTAGGAGGATTTTGGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029770.8 ENSMUST00000197383.5 |
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| 3UTR-3UTR CCA 90 bp | ATCCAAAATCCTCCTAAGACCTTGAGCTTCACACAGGAGATTATGTCTGAACATCCCAAATGGCTCTCCTaGAGTCCAATGCACTTAAAG | + |
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Preference number: 2 (lower is better) Translates to: IQNPPKTLSFTQEIMSEHPKWLS*SPMHLK Trigger: CTTTAAGTGCATTGGACTCCAGGAGAGCCATTTGGG...ATGTTCAGACATAATCTCCTGTGTGAAGCTCAAGGTCTTAGGAGGATTTTGGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029770.8 ENSMUST00000197383.5 |
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| 3UTR-3UTR TCA 90 bp | CAAACCGATTTCACAACTACGTATGATCACGTTCACTCTCAGCCCTCCTTTGTGTTCAATAAAACATTGTaGTTGGTCTGGTTCCCACTA | + |
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Preference number: 2 (lower is better) Translates to: QTDFTTTYDHVHSQPSFVFNKTL*LVWFPL Trigger: TAGTGGGAACCAGACCAATCACAATGTTTTATTGAA...CACAAAGGAGGGCTGAGAGTGAACGTGATCATACGTAGTTGTGAAATCGGTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029770.8 ENSMUST00000197383.5 |
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| 3UTR-3UTR CCA 90 bp | CAAACCGATTTCACAACTACGTATGATCACGTTCACTCTCAGCCCTCCTTTGTGTTAGCTGACTTCAAATaGTTTACATCCCAGGATGAA | + |
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Preference number: 2 (lower is better) Translates to: QTDFTTTYDHVHSQPSFVLADFK*FTSQDE Trigger: TTCATCCTGGGATGTAAACCATTTGAAGTCAGCTAA...CACAAAGGAGGGCTGAGAGTGAACGTGATCATACGTAGTTGTGAAATCGGTTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029770.8 ENSMUST00000197383.5 |
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| 3UTR-3UTR CCA 90 bp | TTTCAGAGCCCACTCAATCAAACCGATTTCACAACTACGTATGATCACGTTCACTGGTTCCCACTACCATaGGGCATAAGAAATGAAACT | + |
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Preference number: 2 (lower is better) Translates to: FQSPLNQTDFTTTYDHVHWFPLP*GIRNET Trigger: AGTTTCATTTCTTATGCCCCATGGTAGTGGGAACCA...GTGAACGTGATCATACGTAGTTGTGAAATCGGTTTGATTGAGTGGGCTCTGAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029770.8 ENSMUST00000197383.5 |
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| 3UTR-3UTR TCA 90 bp | TTATGTCTGAACATTCCAAACACTGGTCAGACTGGTACAACAGGTAGCAACCACATGGGGCATAAGAAATaGAACTCAAGACTACTTTGT | + |
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Preference number: 2 (lower is better) Translates to: LCLNIPNTGQTGTTGSNHMGHKK*NSRLLC Trigger: ACAAAGTAGTCTTGAGTTTCATTTCTTATGCCCCAT...GTGGTTGCTACCTGTTGTACCAGTCTGACCAGTGTTTGGAATGTTCAGACATAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029770.8 ENSMUST00000197383.5 |
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| 3UTR-3UTR CCA 90 bp | AGTCATTTCACGCCCAGCCAAAACTATACGACCCAAAGCTTGAGACATTCTCAATTAGCTGACTTCAAATaGTTTACATCCCAGGATGAA | + |
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Preference number: 2 (lower is better) Translates to: SHFTPSQNYTTQSLRHSQLADFK*FTSQDE Trigger: TTCATCCTGGGATGTAAACCATTTGAAGTCAGCTAA...TTGAGAATGTCTCAAGCTTTGGGTCGTATAGTTTTGGCTGGGCGTGAAATGACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197662.5 |
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| 3UTR-3UTR CCA 90 bp | ATCCAAAATCCTCCTAAGACCTTGAGCTTCACACAGGAGATTATGTCTGAACATTGGTTCCCACTACCATaGGGCATAAGAAATGAAACT | + |
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Preference number: 2 (lower is better) Translates to: IQNPPKTLSFTQEIMSEHWFPLP*GIRNET Trigger: AGTTTCATTTCTTATGCCCCATGGTAGTGGGAACCA...ATGTTCAGACATAATCTCCTGTGTGAAGCTCAAGGTCTTAGGAGGATTTTGGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029770.8 ENSMUST00000197383.5 |
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| 3UTR-3UTR CCA 90 bp | TGTGATCTTTTTGAATTCATAATTGCCTCTCCCATCCATATGCAGGTAGTACTCTCCTGTGTAAGCAGCTaGTCTGGATTTGCTATTCTG | + |
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Preference number: 2 (lower is better) Translates to: CDLFEFIIASPIHMQVVLSCVSS*SGFAIL Trigger: CAGAATAGCAAATCCAGACCAGCTGCTTACACAGGA...GAGTACTACCTGCATATGGATGGGAGAGGCAATTATGAATTCAAAAAGATCACA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000197662.5 |
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| 3UTR CAA 90 bp | AAGAAGTTATTAACCAGAGAGATAAGAGGCATGGCAGCGATGAAGTaGAATAAGTATCTCTTGAAATCTTTGCTGCTGCGACCAATGATG | + |
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Preference number: 2 (lower is better) Translates to: KKLLTREIRGMAAMK*NKYLLKSLLLRPMM Trigger: CATCATTGGTCGCAGCAGCAAAGATTTCAAGAGATACTTATTCAACTTCATCGCTGCCATGCCTCTTATCTCTCTGGTTAATAACTTCTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197662.5 |
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| 3UTR-3UTR CCA 90 bp | AATCCTCCTAAGACCTTGAGCTTCACACAGGAGATTATGTCTGAACATTCCAAAATAAAACATTGTGATTaGTCTGGTTCCCACTACCAT | + |
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Preference number: 2 (lower is better) Translates to: NPPKTLSFTQEIMSEHSKIKHCD*SGSHYH Trigger: ATGGTAGTGGGAACCAGACCAATCACAATGTTTTAT...TTTGGAATGTTCAGACATAATCTCCTGTGTGAAGCTCAAGGTCTTAGGAGGATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029770.8 ENSMUST00000197383.5 |
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| 3UTR-3UTR TCA 90 bp | CATTATACAACCACATTTCTGATGAGACTGTCCATCTCTTCACAAAATCCAAAAAAACAGGGTTCTTCATaGAAGAAAAAGACAGAGCCA | + |
|
Preference number: 2 (lower is better) Translates to: HYTTTFLMRLSISSQNPKKQGSS*KKKTEP Trigger: TGGCTCTGTCTTTTTCTTTCATGAAGAACCCTGTTT...TTTTGGATTTTGTGAAGAGATGGACAGTCTCATCAGAAATGTGGTTGTATAATG 37% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000029770.8 ENSMUST00000197383.5 |
||
| 3UTR-3UTR CAA 90 bp | CGAGGGTGTGCCAGATCTAGGAAGGGGCGACTGACAACCAGGTACCCGACGACAGCAGCTGGTCTGGATTaGCTATTCTGTTATCCAGGT | + |
|
Preference number: 3 (lower is better) Translates to: RGCARSRKGRLTTRYPTTAAGLD*LFCYPG Trigger: ACCTGGATAACAGAATAGCAAATCCAGACCAGCTGC...TGTCGTCGGGTACCTGGTTGTCAGTCGCCCCTTCCTAGATCTGGCACACCCTCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197662.5 |
||
| 3UTR-3UTR CAA 90 bp | CTCCAAAAAGAGGCCATAACTCACCAAGAACACGGAAGAGGGAGCTCTTTCCACAGTAGGCCATCATGCTaGCCGGGCCCTGAGCTCCAA | + |
|
Preference number: 3 (lower is better) Translates to: LQKEAITHQEHGRGSSFHSRPSC*PGPELQ Trigger: TTGGAGCTCAGGGCCCGGCAAGCATGATGGCCTACT...GTGGAAAGAGCTCCCTCTTCCGTGTTCTTGGTGAGTTATGGCCTCTTTTTGGAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000197662.5 |
||
| 3UTR GCA 72 bp | CACTTTGGTAGTAATCCTCCAGCAGCTCTGAGTGTGTaGTGTGAAGGTGGCGAGGGTGTGCCAGATCTAGGA | + |
|
Preference number: 3 (lower is better) Translates to: HFGSNPPAALSV*CEGGEGVPDLG Trigger: TCCTAGATCTGGCACACCCTCGCCACCTTCACAGCACACACTCAGAGCTGCTGGAGGATTACTACCAAAGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197662.5 |
||
| 3UTR TCA 72 bp | GTCTTGCCATCGCCATTCTTTGTTTCTCTCCTCCGCTaGGTACATCCATCCAGTCCTGAACACTGTCCCAGC | + |
|
Preference number: 3 (lower is better) Translates to: VLPSPFFVSLLR*VHPSSPEHCPS Trigger: GCTGGGACAGTGTTCAGGACTGGATGGATGTACTCAGCGGAGGAGAGAAACAAAGAATGGCGATGGCAAGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197662.5 |
||
| 3UTR CCA 72 bp | AAGAACACGGAAGAGGGAGCTCTTTCCACAGCCGTTTaGACCACAAATCAGAACGTTGGCCCCAGATCGAAC | + |
|
Preference number: 3 (lower is better) Translates to: KNTEEGALSTAV*TTNQNVGPRSN Trigger: GTTCGATCTGGGGCCAACGTTCTGATTTGTGGTCCAAACGGCTGTGGAAAGAGCTCCCTCTTCCGTGTTCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197662.5 |
||
| 3UTR-3UTR CAA 90 bp | GTACTCCTTCAGCACCTGGTCAGAGATCCCCCTCTTCTTCTGATCTTCCTTTCCAAGCATCCTTCCACTTaGGTAGTAATCCTCCAGCAG | + |
|
Preference number: 3 (lower is better) Translates to: VLLQHLVRDPPLLLIFLSKHPST*VVILQQ Trigger: CTGCTGGAGGATTACTACCAAAGTGGAAGGATGCTT...GGAAAGGAAGATCAGAAGAAGAGGGGGATCTCTGACCAGGTGCTGAAGGAGTAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000197662.5 |
||
| 3UTR GCA 72 bp | TTAGGAATAGCCCAGAAACAAGCAAGTAGGCCATCATaGTTGCCGGGCCCTGAGCTCCAATTGCACTTGTTA | + |
|
Preference number: 3 (lower is better) Translates to: LGIAQKQASRPS*LPGPELQLHLL Trigger: TAACAAGTGCAATTGGAGCTCAGGGCCCGGCAAGCATGATGGCCTACTTGCTTGTTTCTGGGCTATTCCTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197662.5 |
||
| 3UTR TCA 72 bp | GTAGTACTCGTGGTGCTTCCAAAGGGACTTTCTGTGTaGAACGGTAAAGAGGGTGATGCCAACCTTTCGACA | + |
|
Preference number: 3 (lower is better) Translates to: VVLVVLPKGLSV*NGKEGDANLST Trigger: TGTCGAAAGGTTGGCATCACCCTCTTTACCGTTTCACACAGAAAGTCCCTTTGGAAGCACCACGAGTACTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197662.5 |
||
| 3UTR CCA 72 bp | CTACGTATGATCACGTTCACTCTCAGCCCTCCTTTGTaGAAACAACAGTTAGTCTCTAATGGTTCCGGGGAG | + |
|
Preference number: 3 (lower is better) Translates to: LRMITFTLSPPL*KQQLVSNGSGE Trigger: CTCCCCGGAACCATTAGAGACTAACTGTTGTTTCCACAAAGGAGGGCTGAGAGTGAACGTGATCATACGTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029770.8 ENSMUST00000197383.5 |
||
| 3UTR-3UTR CAA 90 bp | CAAACCGATTTCACAACTACGTATGATCACGTTCACTCTCAGCCCTCCTTTGTGGCTGCATACACACTGTaGTACACCACATACACACTG | + |
|
Preference number: 3 (lower is better) Translates to: QTDFTTTYDHVHSQPSFVAAYTL*YTTYTL Trigger: CAGTGTGTATGTGGTGTACAACAGTGTGTATGCAGC...CACAAAGGAGGGCTGAGAGTGAACGTGATCATACGTAGTTGTGAAATCGGTTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029770.8 ENSMUST00000197383.5 |
||
| 3UTR TCA 72 bp | GAGCCCACTCAATCAAACCGATTTCACAACTACGTATaGTCACGTTCACTCTCAGCCCTCCTTTGTGGAAAC | + |
|
Preference number: 3 (lower is better) Translates to: EPTQSNRFHNYV*SRSLSALLCGN Trigger: GTTTCCACAAAGGAGGGCTGAGAGTGAACGTGATCATACGTAGTTGTGAAATCGGTTTGATTGAGTGGGCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029770.8 ENSMUST00000197383.5 |
||
| 3UTR TCA 72 bp | GACAGTGGCTGTAAATGTAGTCCTCCACATCCACACTaGCCGCACTTGTGCATTCATCCAAAATGGCAAACT | + |
|
Preference number: 3 (lower is better) Translates to: DSGCKCSPPHPH*PHLCIHPKWQT Trigger: AGTTTGCCATTTTGGATGAATGCACAAGTGCGGTCAGTGTGGATGTGGAGGACTACATTTACAGCCACTGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197662.5 |
||
| 3UTR-3UTR CAA 90 bp | CTCCAAAAAGAGGCCATAACTCACCAAGAACACGGAAGAGGGAGCTCTTTCCACATGGCAGCGATGAAGTaGAATAAGTATCTCTTGAAA | + |
|
Preference number: 3 (lower is better) Translates to: LQKEAITHQEHGRGSSFHMAAMK*NKYLLK Trigger: TTTCAAGAGATACTTATTCAACTTCATCGCTGCCAT...GTGGAAAGAGCTCCCTCTTCCGTGTTCTTGGTGAGTTATGGCCTCTTTTTGGAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000197662.5 |
||
| 3UTR TCA 72 bp | CTATTCTGTTATCCAGGTTGCCCATTTTATAATAGGTaGAAGCTTGGAGATACTCCTCGTAGAGGTACCGTG | + |
|
Preference number: 3 (lower is better) Translates to: LFCYPGCPFYNR*KLGDTPRRGTV Trigger: CACGGTACCTCTACGAGGAGTATCTCCAAGCTTTCACCTATTATAAAATGGGCAACCTGGATAACAGAATAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197662.5 |
||
| 3UTR TCA 72 bp | ATCAGGGTTATCTTGGTAGCCAGTGATTGTGAGTTATaGAGAAACAAGACCATTAAATGCCCCTTTCAGAGC | + |
|
Preference number: 3 (lower is better) Translates to: IRVILVASDCEL*RNKTIKCPFQS Trigger: GCTCTGAAAGGGGCATTTAATGGTCTTGTTTCTTCATAACTCACAATCACTGGCTACCAAGATAACCCTGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029770.8 ENSMUST00000197383.5 |
||
| 3UTR GCA 72 bp | CGTGAATTCACGTATCTGTATTCTCCTTCGTACTTCTaGTCCATAATTGTCATCTTACCAATGGGTCTTCTG | + |
|
Preference number: 3 (lower is better) Translates to: REFTYLYSPSYF*SIIVILPMGLL Trigger: CAGAAGACCCATTGGTAAGATGACAATTATGGAGCAGAAGTACGAAGGAGAATACAGATACGTGAATTCACG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197662.5 |
||
| 3UTR CCA 72 bp | CTGTTACAAAATTTTTCTACATCCTGTGTAAGCAGCTaGTCTGGATTTGCTATTCTGTTATCCAGGTTGCCC | + |
|
Preference number: 3 (lower is better) Translates to: LLQNFSTSCVSS*SGFAILLSRLP Trigger: GGGCAACCTGGATAACAGAATAGCAAATCCAGACCAGCTGCTTACACAGGATGTAGAAAAATTTTGTAACAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000197662.5 |
||
| 3UTR-3UTR CAA 90 bp | TGTGATCTTTTTGAATTCATAATTGCCTCTCCCATCCATATGCAGGTAGTACTCTATCTCTTGAAATCTTaGCTGCTGCGACCAATGATG | + |
|
Preference number: 3 (lower is better) Translates to: CDLFEFIIASPIHMQVVLYLLKS*LLRPMM Trigger: CATCATTGGTCGCAGCAGCAAAGATTTCAAGAGATA...GAGTACTACCTGCATATGGATGGGAGAGGCAATTATGAATTCAAAAAGATCACA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000197662.5 |
||
| 3UTR TCA 72 bp | TCCTGTAACGATGGAATATGTTTCAATAAAACATTGTaGTTGGTCTGGTTCCCACTACCATGGGGCATAAGA | + |
|
Preference number: 3 (lower is better) Translates to: SCNDGICFNKTL*LVWFPLPWGIR Trigger: TCTTATGCCCCATGGTAGTGGGAACCAGACCAATCACAATGTTTTATTGAAACATATTCCATCGTTACAGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029770.8 ENSMUST00000197383.5 |
||
| 3UTR TCA 72 bp | CATCTCTTCACAAAATCCAAAATCCTCCTAAGACCTTaGGCTTCACACAGGAGATTATGTCTGAACATTCCA | + |
|
Preference number: 3 (lower is better) Translates to: HLFTKSKILLRP*ASHRRLCLNIP Trigger: TGGAATGTTCAGACATAATCTCCTGTGTGAAGCTCAAGGTCTTAGGAGGATTTTGGATTTTGTGAAGAGATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029770.8 ENSMUST00000197383.5 |
||
| 3UTR-3UTR CAA 90 bp | TGTGATCTTTTTGAATTCATAATTGCCTCTCCCATCCATATGCAGGTAGTACTCTGTCACCATTTGGTGTaGCTAAAGGAACATGATCAA | + |
|
Preference number: 3 (lower is better) Translates to: CDLFEFIIASPIHMQVVLCHHLV*LKEHDQ Trigger: TTGATCATGTTCCTTTAGCAACACCAAATGGTGACA...GAGTACTACCTGCATATGGATGGGAGAGGCAATTATGAATTCAAAAAGATCACA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000197662.5 |
||
| 3UTR CCA 72 bp | GACAGAGCCATAAAAGTCAAATTAGCTGACTTCAAATaGTTTACATCCCAGGATGAATCAGGTTACACTGAT | + |
|
Preference number: 3 (lower is better) Translates to: DRAIKVKLADFK*FTSQDESGYTD Trigger: ATCAGTGTAACCTGATTCATCCTGGGATGTAAACCATTTGAAGTCAGCTAATTTGACTTTTATGGCTCTGTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029770.8 ENSMUST00000197383.5 ENSMUST00000197662.5 |
||
| 3UTR CCA 72 bp | ACAAAATTTTTCTACATCCTGTGTAAGCAGCTGGTCTaGATTTGCTATTCTGTTATCCAGGTTGCCCATTTT | + |
|
Preference number: 3 (lower is better) Translates to: TKFFYILCKQLV*ICYSVIQVAHF Trigger: AAAATGGGCAACCTGGATAACAGAATAGCAAATCCAGACCAGCTGCTTACACAGGATGTAGAAAAATTTTGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000197662.5 |
||
| 3UTR GCA 72 bp | TTTTTCTACATCCTGTGTAAGCAGCTGGTCTGGATTTaGTATTCTGTTATCCAGGTTGCCCATTTTATAATA | + |
|
Preference number: 3 (lower is better) Translates to: FFYILCKQLVWI*YSVIQVAHFII Trigger: TATTATAAAATGGGCAACCTGGATAACAGAATAGCAAATCCAGACCAGCTGCTTACACAGGATGTAGAAAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000197662.5 |
||
| 3UTR GCA 72 bp | CCTTCTCCTGTTGTGACACCATTGTACGTTCATATCTaGCATGATTTAAGTCCTTTAGTACTTGCATTAATT | + |
|
Preference number: 3 (lower is better) Translates to: PSPVVTPLYVHI*HDLSPLVLALI Trigger: AATTAATGCAAGTACTAAAGGACTTAAATCATGGCAGATATGAACGTACAATGGTGTCACAACAGGAGAAGG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197662.5 |
||
| 3UTR TCA 72 bp | TCCTGTTGTGACACCATTGTACGTTCATATCTGCCATaGTTTAAGTCCTTTAGTACTTGCATTAATTCTGTA | + |
|
Preference number: 3 (lower is better) Translates to: SCCDTIVRSYLP*FKSFSTCINSV Trigger: TACAGAATTAATGCAAGTACTAAAGGACTTAAATCATGGCAGATATGAACGTACAATGGTGTCACAACAGGA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197662.5 |
||
| 3UTR TCA 72 bp | GTTTTGAAGCAAATGAAGTTCTTGAGATGGTCTCTATaGTCCGAACTCAACTGTATCTTCTGTGATCTTTTT | + |
|
Preference number: 3 (lower is better) Translates to: VLKQMKFLRWSL*SELNCIFCDLF Trigger: AAAAAGATCACAGAAGATACAGTTGAGTTCGGATCATAGAGACCATCTCAAGAACTTCATTTGCTTCAAAAC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197662.5 |
||
| CDS-3UTR CCA 90 bp | ATAGCCCAGAAACAAGCAAGTAGGCCATCATGCTTGCCGGGCCCTGAGCTCCAAGCGCGACGCCGCTTATaGAGTAGGCAGAGCAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: IAQKQASRPSCLPGPELQARRRL*SRQSSR Trigger: CCTGCTGCTCTGCCTACTCCATAAGCGGCGTCGCGC...TTGGAGCTCAGGGCCCGGCAAGCATGATGGCCTACTTGCTTGTTTCTGGGCTAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197662.5 |
||
| CDS-3UTR GCA 90 bp | GTCCAGGAGTCAGAGACCGTTCCTAGGAAATGTCATTCACCCATGTGCATGAGACCACTTTTCTTACCGTaGAGGCCGAGGGCGCGACGC | + |
|
Preference number: 4 (lower is better) Translates to: VQESETVPRKCHSPMCMRPLFLP*RPRARR Trigger: GCGTCGCGCCCTCGGCCTGCACGGTAAGAAAAGTGG...TCTCATGCACATGGGTGAATGACATTTCCTAGGAACGGTCTCTGACTCCTGGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029770.8 ENSMUST00000197383.5 |
||
| CDS-3UTR TCA 90 bp | GTCCAGGAGTCAGAGACCGTTCCTAGGAAATGTCATTCACCCATGTGCATGAGAACATCCATCCAGTCCTaGACACTGTCCCAGCCGCCT | + |
|
Preference number: 4 (lower is better) Translates to: VQESETVPRKCHSPMCMRTSIQS*TLSQPP Trigger: AGGCGGCTGGGACAGTGTTCAGGACTGGATGGATGT...TCTCATGCACATGGGTGAATGACATTTCCTAGGAACGGTCTCTGACTCCTGGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029770.8 ENSMUST00000197383.5 |
||
| CDS-3UTR CCA 90 bp | CCACTCAATCAAACCGATTTCACAACTACGTATGATCACGTTCACTCTCAGCCCGCGCGACGCCGCTTATaGAGTAGGCAGAGCAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: PLNQTDFTTTYDHVHSQPARRRL*SRQSSR Trigger: CCTGCTGCTCTGCCTACTCCATAAGCGGCGTCGCGC...GGGCTGAGAGTGAACGTGATCATACGTAGTTGTGAAATCGGTTTGATTGAGTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029770.8 ENSMUST00000197383.5 |
||
| CDS-3UTR CCA 90 bp | CTCATGTGGCGCTCACCATTATACAACCACATTTCTGATGAGACTGTCCATCTCGCGCGACGCCGCTTATaGAGTAGGCAGAGCAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LMWRSPLYNHISDETVHLARRRL*SRQSSR Trigger: CCTGCTGCTCTGCCTACTCCATAAGCGGCGTCGCGC...GAGATGGACAGTCTCATCAGAAATGTGGTTGTATAATGGTGAGCGCCACATGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029770.8 ENSMUST00000197383.5 |
||
| CDS-3UTR TCA 90 bp | CTCATGTGGCGCTCACCATTATACAACCACATTTCTGATGAGACTGTCCATCTCTCTGAGTGTGTGCTGTaGAGGTGGCGAGGGTGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: LMWRSPLYNHISDETVHLSECVL*RWRGCA Trigger: GGCACACCCTCGCCACCTTCACAGCACACACTCAGA...GAGATGGACAGTCTCATCAGAAATGTGGTTGTATAATGGTGAGCGCCACATGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029770.8 |
||
| CDS-3UTR GCA 90 bp | CTCATGTGGCGCTCACCATTATACAACCACATTTCTGATGAGACTGTCCATCTCGCAGCTCTGAGTGTGTaGTGTGAAGGTGGCGAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: LMWRSPLYNHISDETVHLAALSV*CEGGEG Trigger: ACCCTCGCCACCTTCACAGCACACACTCAGAGCTGC...GAGATGGACAGTCTCATCAGAAATGTGGTTGTATAATGGTGAGCGCCACATGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029770.8 |
||
| CDS-3UTR GCA 90 bp | ATCCAAAATCCTCCTAAGACCTTGAGCTTCACACAGGAGATTATGTCTGAACATCCACTTTTCTTACCGTaGAGGCCGAGGGCGCGACGC | + |
|
Preference number: 4 (lower is better) Translates to: IQNPPKTLSFTQEIMSEHPLFLP*RPRARR Trigger: GCGTCGCGCCCTCGGCCTGCACGGTAAGAAAAGTGG...ATGTTCAGACATAATCTCCTGTGTGAAGCTCAAGGTCTTAGGAGGATTTTGGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029770.8 ENSMUST00000197383.5 |
||
| CDS-3UTR GCA 90 bp | TTTCAGAGCCCACTCAATCAAACCGATTTCACAACTACGTATGATCACGTTCACGCAAGTAGGCCATCATaGTTGCCGGGCCCTGAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: FQSPLNQTDFTTTYDHVHASRPS*LPGPEL Trigger: GAGCTCAGGGCCCGGCAAGCATGATGGCCTACTTGC...GTGAACGTGATCATACGTAGTTGTGAAATCGGTTTGATTGAGTGGGCTCTGAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029770.8 ENSMUST00000197383.5 |
||
| CDS-3UTR GCA 90 bp | CTCATGTGGCGCTCACCATTATACAACCACATTTCTGATGAGACTGTCCATCTCCAGCGAGGTGTTCCGTaGCGTCAAGTACTTGCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: LMWRSPLYNHISDETVHLQRGVP*RQVLAE Trigger: TTCAGCAAGTACTTGACGGCACGGAACACCTCGCTG...GAGATGGACAGTCTCATCAGAAATGTGGTTGTATAATGGTGAGCGCCACATGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029770.8 ENSMUST00000197383.5 |
||
| 3UTR CAA 72 bp | CTCTTTCCACAGCCGTTTGGACCACAAATCAGAACGTaGGCCCCAGATCGAACTTCAAAACTAAGGTCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: LFPQPFGPQIRT*APDRTSKLRSW Trigger: CCAAGACCTTAGTTTTGAAGTTCGATCTGGGGCCAACGTTCTGATTTGTGGTCCAAACGGCTGTGGAAAGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000197662.5 |
||
| CDS-3UTR GCA 90 bp | GACAGAGCCATAAAAGTCAAATTAGCTGACTTCAAATGGTTTACATCCCAGGATGCAAGTAGGCCATCATaGTTGCCGGGCCCTGAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: DRAIKVKLADFKWFTSQDASRPS*LPGPEL Trigger: GAGCTCAGGGCCCGGCAAGCATGATGGCCTACTTGC...ATCCTGGGATGTAAACCATTTGAAGTCAGCTAATTTGACTTTTATGGCTCTGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029770.8 ENSMUST00000197383.5 |
||
| CDS-3UTR CCA 90 bp | GTCCAGGAGTCAGAGACCGTTCCTAGGAAATGTCATTCACCCATGTGCATGAGATCCTGTGTAAGCAGCTaGTCTGGATTTGCTATTCTG | + |
|
Preference number: 4 (lower is better) Translates to: VQESETVPRKCHSPMCMRSCVSS*SGFAIL Trigger: CAGAATAGCAAATCCAGACCAGCTGCTTACACAGGA...TCTCATGCACATGGGTGAATGACATTTCCTAGGAACGGTCTCTGACTCCTGGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029770.8 ENSMUST00000197383.5 |
||
| CDS-3UTR CCA 90 bp | GTCCAGGAGTCAGAGACCGTTCCTAGGAAATGTCATTCACCCATGTGCATGAGATCTGGATATATGACTTaGTCTCTCAGTGTTCCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: VQESETVPRKCHSPMCMRSGYMT*SLSVPR Trigger: CCTGGGAACACTGAGAGACCAAGTCATATATCCAGA...TCTCATGCACATGGGTGAATGACATTTCCTAGGAACGGTCTCTGACTCCTGGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029770.8 ENSMUST00000197383.5 |
||
| CDS-3UTR TCA 90 bp | CTCATGTGGCGCTCACCATTATACAACCACATTTCTGATGAGACTGTCCATCTCTACCAATGGGTCTTCTaGGTCGAGTTAGGAATAGCC | + |
|
Preference number: 4 (lower is better) Translates to: LMWRSPLYNHISDETVHLYQWVF*VELGIA Trigger: GGCTATTCCTAACTCGACTCAGAAGACCCATTGGTA...GAGATGGACAGTCTCATCAGAAATGTGGTTGTATAATGGTGAGCGCCACATGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029770.8 ENSMUST00000197383.5 |
||
| CDS-3UTR TCA 90 bp | CCACTCAATCAAACCGATTTCACAACTACGTATGATCACGTTCACTCTCAGCCCTACCAATGGGTCTTCTaGGTCGAGTTAGGAATAGCC | + |
|
Preference number: 4 (lower is better) Translates to: PLNQTDFTTTYDHVHSQPYQWVF*VELGIA Trigger: GGCTATTCCTAACTCGACTCAGAAGACCCATTGGTA...GGGCTGAGAGTGAACGTGATCATACGTAGTTGTGAAATCGGTTTGATTGAGTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029770.8 ENSMUST00000197383.5 |
||
| CDS-3UTR TCA 90 bp | AATCCTCCTAAGACCTTGAGCTTCACACAGGAGATTATGTCTGAACATTCCAAAATCCTCCAGCAGCTCTaGGTGTGTGCTGTGAAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: NPPKTLSFTQEIMSEHSKILQQL*VCAVKV Trigger: CACCTTCACAGCACACACTCAGAGCTGCTGGAGGAT...TTTGGAATGTTCAGACATAATCTCCTGTGTGAAGCTCAAGGTCTTAGGAGGATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029770.8 |
||
| CDS-3UTR TCA 90 bp | GTCCAGGAGTCAGAGACCGTTCCTAGGAAATGTCATTCACCCATGTGCATGAGAATACGACCCAAAGCTTaGGACATTCTCAAAAGCATC | + |
|
Preference number: 4 (lower is better) Translates to: VQESETVPRKCHSPMCMRIRPKA*DILKSI Trigger: GATGCTTTTGAGAATGTCTCAAGCTTTGGGTCGTAT...TCTCATGCACATGGGTGAATGACATTTCCTAGGAACGGTCTCTGACTCCTGGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029770.8 |
||
| CDS-3UTR TCA 90 bp | CCACTGTGTACCGAACGCTATCCTGTAACGATGGAATATGTTTCAATAAAACATACATCCATCCAGTCCTaGACACTGTCCCAGCCGCCT | + |
|
Preference number: 4 (lower is better) Translates to: PLCTERYPVTMEYVSIKHTSIQS*TLSQPP Trigger: AGGCGGCTGGGACAGTGTTCAGGACTGGATGGATGT...ATGTTTTATTGAAACATATTCCATCGTTACAGGATAGCGTTCGGTACACAGTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029770.8 ENSMUST00000197383.5 |
||
| CDS-3UTR GCA 90 bp | GTCCAGGAGTCAGAGACCGTTCCTAGGAAATGTCATTCACCCATGTGCATGAGACAGCTGGTCTGGATTTaGTATTCTGTTATCCAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: VQESETVPRKCHSPMCMRQLVWI*YSVIQV Trigger: AACCTGGATAACAGAATAGCAAATCCAGACCAGCTG...TCTCATGCACATGGGTGAATGACATTTCCTAGGAACGGTCTCTGACTCCTGGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029770.8 ENSMUST00000197383.5 |
||
| CDS-3UTR GCA 90 bp | CCACTCAATCAAACCGATTTCACAACTACGTATGATCACGTTCACTCTCAGCCCCAAGGGACTAGCTTGTaGTCCTTCAATACCCTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: PLNQTDFTTTYDHVHSQPQGTSL*SFNTLL Trigger: GAGAAGGGTATTGAAGGAGCACAAGCTAGTCCCTTG...GGGCTGAGAGTGAACGTGATCATACGTAGTTGTGAAATCGGTTTGATTGAGTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029770.8 ENSMUST00000197383.5 |
||
| 3UTR CAA 72 bp | CAACTACGTATGATCACGTTCACTCTCAGCCCTCCTTaGTGGAAACAACAGTTAGTCTCTAATGGTTCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: QLRMITFTLSPP*WKQQLVSNGSG Trigger: CCCGGAACCATTAGAGACTAACTGTTGTTTCCACAAAGGAGGGCTGAGAGTGAACGTGATCATACGTAGTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029770.8 ENSMUST00000197383.5 |
||
| CDS-3UTR TCA 90 bp | AATCCTCCTAAGACCTTGAGCTTCACACAGGAGATTATGTCTGAACATTCCAAACCTCCACATCCACACTaGCCGCACTTGTGCATTCAT | + |
|
Preference number: 4 (lower is better) Translates to: NPPKTLSFTQEIMSEHSKPPHPH*PHLCIH Trigger: ATGAATGCACAAGTGCGGTCAGTGTGGATGTGGAGG...TTTGGAATGTTCAGACATAATCTCCTGTGTGAAGCTCAAGGTCTTAGGAGGATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029770.8 ENSMUST00000197383.5 |
||
| CDS-3UTR GCA 90 bp | AATCCTCCTAAGACCTTGAGCTTCACACAGGAGATTATGTCTGAACATTCCAAACAGCGAGGTGTTCCGTaGCGTCAAGTACTTGCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: NPPKTLSFTQEIMSEHSKQRGVP*RQVLAE Trigger: TTCAGCAAGTACTTGACGGCACGGAACACCTCGCTG...TTTGGAATGTTCAGACATAATCTCCTGTGTGAAGCTCAAGGTCTTAGGAGGATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029770.8 ENSMUST00000197383.5 |
||
| CDS-3UTR CCA 90 bp | CCACTCAATCAAACCGATTTCACAACTACGTATGATCACGTTCACTCTCAGCCCTCCTGTGTAAGCAGCTaGTCTGGATTTGCTATTCTG | + |
|
Preference number: 4 (lower is better) Translates to: PLNQTDFTTTYDHVHSQPSCVSS*SGFAIL Trigger: CAGAATAGCAAATCCAGACCAGCTGCTTACACAGGA...GGGCTGAGAGTGAACGTGATCATACGTAGTTGTGAAATCGGTTTGATTGAGTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029770.8 ENSMUST00000197383.5 |
||
| CDS-3UTR CCA 90 bp | CAAACCGATTTCACAACTACGTATGATCACGTTCACTCTCAGCCCTCCTTTGTGCACAAATCAGAACGTTaGCCCCAGATCGAACTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: QTDFTTTYDHVHSQPSFVHKSER*PQIELQ Trigger: TTGAAGTTCGATCTGGGGCCAACGTTCTGATTTGTG...CACAAAGGAGGGCTGAGAGTGAACGTGATCATACGTAGTTGTGAAATCGGTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029770.8 ENSMUST00000197383.5 |
||
| 3UTR CAA 72 bp | GTTATCCAGGTTGCCCATTTTATAATAGGTGAAAGCTaGGAGATACTCCTCGTAGAGGTACCGTGTGAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: VIQVAHFIIGES*EILLVEVPCEP Trigger: AGGCTCACACGGTACCTCTACGAGGAGTATCTCCAAGCTTTCACCTATTATAAAATGGGCAACCTGGATAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197662.5 |
||
| 3UTR CAA 72 bp | GTAGGTGTTCCACCAGTTTTCGGAAGACTGAGTGGATaGTCTGCTTCTCCCGTTTATTCCCATTGTAAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: VGVPPVFGRLSG*SASPVYSHCKR Trigger: CCTTTTACAATGGGAATAAACGGGAGAAGCAGACAATCCACTCAGTCTTCCGAAAACTGGTGGAACACCTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000197662.5 |
||
| CDS-3UTR TCA 90 bp | GACAGAGCCATAAAAGTCAAATTAGCTGACTTCAAATGGTTTACATCCCAGGATCCTCCACATCCACACTaGCCGCACTTGTGCATTCAT | + |
|
Preference number: 4 (lower is better) Translates to: DRAIKVKLADFKWFTSQDPPHPH*PHLCIH Trigger: ATGAATGCACAAGTGCGGTCAGTGTGGATGTGGAGG...ATCCTGGGATGTAAACCATTTGAAGTCAGCTAATTTGACTTTTATGGCTCTGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029770.8 ENSMUST00000197383.5 |
||
| CDS-3UTR GCA 90 bp | CCTGTTGTGACACCATTGTACGTTCATATCTGCCATGATTTAAGTCCTTTAGTACAGCGAGGTGTTCCGTaGCGTCAAGTACTTGCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: PVVTPLYVHICHDLSPLVQRGVP*RQVLAE Trigger: TTCAGCAAGTACTTGACGGCACGGAACACCTCGCTG...TACTAAAGGACTTAAATCATGGCAGATATGAACGTACAATGGTGTCACAACAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197662.5 |
||
| CDS-3UTR CCA 90 bp | TTATGTCTGAACATTCCAAACACTGGTCAGACTGGTACAACAGGTAGCAACCACCACAAATCAGAACGTTaGCCCCAGATCGAACTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: LCLNIPNTGQTGTTGSNHHKSER*PQIELQ Trigger: TTGAAGTTCGATCTGGGGCCAACGTTCTGATTTGTG...GTGGTTGCTACCTGTTGTACCAGTCTGACCAGTGTTTGGAATGTTCAGACATAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029770.8 ENSMUST00000197383.5 |
||
| CDS-3UTR CCA 90 bp | TTATGTCTGAACATTCCAAACACTGGTCAGACTGGTACAACAGGTAGCAACCACTCTGGATATATGACTTaGTCTCTCAGTGTTCCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LCLNIPNTGQTGTTGSNHSGYMT*SLSVPR Trigger: CCTGGGAACACTGAGAGACCAAGTCATATATCCAGA...GTGGTTGCTACCTGTTGTACCAGTCTGACCAGTGTTTGGAATGTTCAGACATAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029770.8 ENSMUST00000197383.5 |
||
| CDS-3UTR CCA 90 bp | GTCCAGGAGTCAGAGACCGTTCCTAGGAAATGTCATTCACCCATGTGCATGAGAATCTTCCTTTCCATCTaGATATATGACTTGGTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: VQESETVPRKCHSPMCMRIFLSI*IYDLVS Trigger: AGAGACCAAGTCATATATCCAGATGGAAAGGAAGAT...TCTCATGCACATGGGTGAATGACATTTCCTAGGAACGGTCTCTGACTCCTGGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029770.8 ENSMUST00000197383.5 |
||
| 3UTR CAA 72 bp | GCAGCGATGAAGTTGAATAAGTATCTCTTGAAATCTTaGCTGCTGCGACCAATGATGCCACTCTCAATGAGC | + |
|
Preference number: 4 (lower is better) Translates to: AAMKLNKYLLKS*LLRPMMPLSMS Trigger: GCTCATTGAGAGTGGCATCATTGGTCGCAGCAGCAAAGATTTCAAGAGATACTTATTCAACTTCATCGCTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197662.5 |
||
| 3UTR CAA 72 bp | CTGACAACCAGGTACCCGACGACAGTGGCAACATATTaGGCAATGATGCTATCAATGAAACCCATAGAAAAC | + |
|
Preference number: 4 (lower is better) Translates to: LTTRYPTTVATY*AMMLSMKPIEN Trigger: GTTTTCTATGGGTTTCATTGATAGCATCATTGCCAAATATGTTGCCACTGTCGTCGGGTACCTGGTTGTCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197662.5 |
||
| CDS-3UTR TCA 90 bp | ATCCAAAATCCTCCTAAGACCTTGAGCTTCACACAGGAGATTATGTCTGAACATCAGTTTTCGGAAGACTaGGTGGATTGTCTGCTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: IQNPPKTLSFTQEIMSEHQFSED*VDCLLL Trigger: GAGAAGCAGACAATCCACTCAGTCTTCCGAAAACTG...ATGTTCAGACATAATCTCCTGTGTGAAGCTCAAGGTCTTAGGAGGATTTTGGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029770.8 |
||
| CDS-3UTR GCA 90 bp | AATCCTCCTAAGACCTTGAGCTTCACACAGGAGATTATGTCTGAACATTCCAAACAAGGGACTAGCTTGTaGTCCTTCAATACCCTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: NPPKTLSFTQEIMSEHSKQGTSL*SFNTLL Trigger: GAGAAGGGTATTGAAGGAGCACAAGCTAGTCCCTTG...TTTGGAATGTTCAGACATAATCTCCTGTGTGAAGCTCAAGGTCTTAGGAGGATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029770.8 ENSMUST00000197383.5 |
||
| CDS-3UTR CCA 90 bp | AATCCTCCTAAGACCTTGAGCTTCACACAGGAGATTATGTCTGAACATTCCAAATTTCGGAAGACTGAGTaGATTGTCTGCTTCTCCCGT | + |
|
Preference number: 4 (lower is better) Translates to: NPPKTLSFTQEIMSEHSKFRKTE*IVCFSR Trigger: ACGGGAGAAGCAGACAATCCACTCAGTCTTCCGAAA...TTTGGAATGTTCAGACATAATCTCCTGTGTGAAGCTCAAGGTCTTAGGAGGATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029770.8 |
||
| CDS-3UTR TCA 90 bp | AATCCTCCTAAGACCTTGAGCTTCACACAGGAGATTATGTCTGAACATTCCAAACTCGGAAGCACAGTTTaGGCTCATTTAACCCATACT | + |
|
Preference number: 4 (lower is better) Translates to: NPPKTLSFTQEIMSEHSKLGSTV*AHLTHT Trigger: AGTATGGGTTAAATGAGCTCAAACTGTGCTTCCGAG...TTTGGAATGTTCAGACATAATCTCCTGTGTGAAGCTCAAGGTCTTAGGAGGATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029770.8 ENSMUST00000197383.5 |
||
| 3UTR CAA 72 bp | CCATCTCTTCACAAAATCCAAAATCCTCCTAAGACCTaGAGCTTCACACAGGAGATTATGTCTGAACATTCC | + |
|
Preference number: 4 (lower is better) Translates to: PSLHKIQNPPKT*SFTQEIMSEHS Trigger: GGAATGTTCAGACATAATCTCCTGTGTGAAGCTCAAGGTCTTAGGAGGATTTTGGATTTTGTGAAGAGATGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029770.8 ENSMUST00000197383.5 |
||
| 3UTR CAA 72 bp | GTGCTCCTTCAATACCCTTCTCCTGTTGTGACACCATaGTACGTTCATATCTGCCATGATTTAAGTCCTTTA | + |
|
Preference number: 4 (lower is better) Translates to: VLLQYPSPVVTP*YVHICHDLSPL Trigger: TAAAGGACTTAAATCATGGCAGATATGAACGTACAATGGTGTCACAACAGGAGAAGGGTATTGAAGGAGCAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197662.5 |
||
| CDS-3UTR TCA 90 bp | GACAGAGCCATAAAAGTCAAATTAGCTGACTTCAAATGGTTTACATCCCAGGATCTCGGAAGCACAGTTTaGGCTCATTTAACCCATACT | + |
|
Preference number: 4 (lower is better) Translates to: DRAIKVKLADFKWFTSQDLGSTV*AHLTHT Trigger: AGTATGGGTTAAATGAGCTCAAACTGTGCTTCCGAG...ATCCTGGGATGTAAACCATTTGAAGTCAGCTAATTTGACTTTTATGGCTCTGTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029770.8 ENSMUST00000197383.5 |
||
| CDS-3UTR GCA 90 bp | AATCCTCCTAAGACCTTGAGCTTCACACAGGAGATTATGTCTGAACATTCCAAACAGCTGGTCTGGATTTaGTATTCTGTTATCCAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: NPPKTLSFTQEIMSEHSKQLVWI*YSVIQV Trigger: AACCTGGATAACAGAATAGCAAATCCAGACCAGCTG...TTTGGAATGTTCAGACATAATCTCCTGTGTGAAGCTCAAGGTCTTAGGAGGATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029770.8 ENSMUST00000197383.5 |
||
| CDS-3UTR GCA 90 bp | CCACTCAATCAAACCGATTTCACAACTACGTATGATCACGTTCACTCTCAGCCCATGATAAAACAGTCTTaGCATCGCCATTCTTTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: PLNQTDFTTTYDHVHSQPMIKQS*HRHSLF Trigger: AAACAAAGAATGGCGATGGCAAGACTGTTTTATCAT...GGGCTGAGAGTGAACGTGATCATACGTAGTTGTGAAATCGGTTTGATTGAGTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029770.8 ENSMUST00000197383.5 |
||
| CDS-3UTR TCA 90 bp | TTTCAGAGCCCACTCAATCAAACCGATTTCACAACTACGTATGATCACGTTCACCCATTTTATAATAGGTaGAAGCTTGGAGATACTCCT | + |
|
Preference number: 4 (lower is better) Translates to: FQSPLNQTDFTTTYDHVHPFYNR*KLGDTP Trigger: AGGAGTATCTCCAAGCTTTCACCTATTATAAAATGG...GTGAACGTGATCATACGTAGTTGTGAAATCGGTTTGATTGAGTGGGCTCTGAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029770.8 ENSMUST00000197383.5 |
||
| CDS-3UTR TCA 90 bp | GACAGAGCCATAAAAGTCAAATTAGCTGACTTCAAATGGTTTACATCCCAGGATTTCCATCTGGATATATaGCTTGGTCTCTCAGTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: DRAIKVKLADFKWFTSQDFHLDI*LGLSVF Trigger: GAACACTGAGAGACCAAGTCATATATCCAGATGGAA...ATCCTGGGATGTAAACCATTTGAAGTCAGCTAATTTGACTTTTATGGCTCTGTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029770.8 ENSMUST00000197383.5 |
||
| CDS-3UTR CCA 90 bp | GACAGAGCCATAAAAGTCAAATTAGCTGACTTCAAATGGTTTACATCCCAGGATTGTAAGCAGCTGGTCTaGATTTGCTATTCTGTTATC | + |
|
Preference number: 4 (lower is better) Translates to: DRAIKVKLADFKWFTSQDCKQLV*ICYSVI Trigger: GATAACAGAATAGCAAATCCAGACCAGCTGCTTACA...ATCCTGGGATGTAAACCATTTGAAGTCAGCTAATTTGACTTTTATGGCTCTGTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029770.8 ENSMUST00000197383.5 |
||
| CDS-3UTR CCA 90 bp | ATCCAAAATCCTCCTAAGACCTTGAGCTTCACACAGGAGATTATGTCTGAACATATCTTCCTTTCCATCTaGATATATGACTTGGTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: IQNPPKTLSFTQEIMSEHIFLSI*IYDLVS Trigger: AGAGACCAAGTCATATATCCAGATGGAAAGGAAGAT...ATGTTCAGACATAATCTCCTGTGTGAAGCTCAAGGTCTTAGGAGGATTTTGGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029770.8 ENSMUST00000197383.5 |
||
| CDS-3UTR TCA 90 bp | GACAGAGCCATAAAAGTCAAATTAGCTGACTTCAAATGGTTTACATCCCAGGATTGGCTTACTAAGATTTaGATACAGATCGACTACACT | + |
|
Preference number: 4 (lower is better) Translates to: DRAIKVKLADFKWFTSQDWLTKI*IQIDYT Trigger: AGTGTAGTCGATCTGTATTCAAATCTTAGTAAGCCA...ATCCTGGGATGTAAACCATTTGAAGTCAGCTAATTTGACTTTTATGGCTCTGTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029770.8 ENSMUST00000197383.5 |
||
| CDS-3UTR TCA 90 bp | CATTATACAACCACATTTCTGATGAGACTGTCCATCTCTTCACAAAATCCAAAATTCCATCTGGATATATaGCTTGGTCTCTCAGTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: HYTTTFLMRLSISSQNPKFHLDI*LGLSVF Trigger: GAACACTGAGAGACCAAGTCATATATCCAGATGGAA...TTTTGGATTTTGTGAAGAGATGGACAGTCTCATCAGAAATGTGGTTGTATAATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029770.8 ENSMUST00000197383.5 |
||
| CDS-3UTR GCA 90 bp | AATCCTCCTAAGACCTTGAGCTTCACACAGGAGATTATGTCTGAACATTCCAAAATGATAAAACAGTCTTaGCATCGCCATTCTTTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: NPPKTLSFTQEIMSEHSKMIKQS*HRHSLF Trigger: AAACAAAGAATGGCGATGGCAAGACTGTTTTATCAT...TTTGGAATGTTCAGACATAATCTCCTGTGTGAAGCTCAAGGTCTTAGGAGGATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029770.8 ENSMUST00000197383.5 |
||
| CDS-3UTR CCA 90 bp | CATTATACAACCACATTTCTGATGAGACTGTCCATCTCTTCACAAAATCCAAAATGTAAGCAGCTGGTCTaGATTTGCTATTCTGTTATC | + |
|
Preference number: 4 (lower is better) Translates to: HYTTTFLMRLSISSQNPKCKQLV*ICYSVI Trigger: GATAACAGAATAGCAAATCCAGACCAGCTGCTTACA...TTTTGGATTTTGTGAAGAGATGGACAGTCTCATCAGAAATGTGGTTGTATAATG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029770.8 ENSMUST00000197383.5 |
||
| CDS-3UTR TCA 90 bp | CATTATACAACCACATTTCTGATGAGACTGTCCATCTCTTCACAAAATCCAAAACCATTTTATAATAGGTaGAAGCTTGGAGATACTCCT | + |
|
Preference number: 4 (lower is better) Translates to: HYTTTFLMRLSISSQNPKPFYNR*KLGDTP Trigger: AGGAGTATCTCCAAGCTTTCACCTATTATAAAATGG...TTTTGGATTTTGTGAAGAGATGGACAGTCTCATCAGAAATGTGGTTGTATAATG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000029770.8 ENSMUST00000197383.5 |
||
| CDS CCA 90 bp | TTTCCACTTTTCTTACCGTGCAGGCCGAGGGCGCGACGCCGCTTATaGAGTAGGCAGAGCAGCAGGAACGCGGCCCCCGCCAGCGAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: FPLFLPCRPRARRRL*SRQSSRNAAPASEV Trigger: CACCTCGCTGGCGGGGGCCGCGTTCCTGCTGCTCTGCCTACTCCATAAGCGGCGTCGCGCCCTCGGCCTGCACGGTAAGAAAAGTGGAAA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029770.8 ENSMUST00000197383.5 |
||
| CDS CCA 90 bp | TTTCTTTCCTTCTTTCCGTGCAGGCCGAGGGCGCGACGCCGCTTATaGAGTAGGCAGAGCAGCAGGAACGCGGCCCCCGCCAGCGAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: FLSFFPCRPRARRRL*SRQSSRNAAPASEV Trigger: CACCTCGCTGGCGGGGGCCGCGTTCCTGCTGCTCTGCCTACTCCATAAGCGGCGTCGCGCCCTCGGCCTGCACGGAAAGAAGGAAAGAAA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000197662.5 |
||
| CDS-3UTR CAA 90 bp | CCACTCAATCAAACCGATTTCACAACTACGTATGATCACGTTCACTCTCAGCCCAGTAGGCCATCATGCTaGCCGGGCCCTGAGCTCCAA | + |
|
Preference number: 5 (lower is better) Translates to: PLNQTDFTTTYDHVHSQPSRPSC*PGPELQ Trigger: TTGGAGCTCAGGGCCCGGCAAGCATGATGGCCTACT...GGGCTGAGAGTGAACGTGATCATACGTAGTTGTGAAATCGGTTTGATTGAGTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029770.8 ENSMUST00000197383.5 |
||
| CDS-3UTR CAA 90 bp | GTCCAGGAGTCAGAGACCGTTCCTAGGAAATGTCATTCACCCATGTGCATGAGACTTGATAAAAACACTTaGTCCACCACAGCTCGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: VQESETVPRKCHSPMCMRLDKNT*STTARS Trigger: AGAGCGAGCTGTGGTGGACAAAGTGTTTTTATCAAG...TCTCATGCACATGGGTGAATGACATTTCCTAGGAACGGTCTCTGACTCCTGGAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029770.8 ENSMUST00000197383.5 |
||
| CDS-3UTR CAA 90 bp | CCACTGTGTACCGAACGCTATCCTGTAACGATGGAATATGTTTCAATAAAACATAGTAGGCCATCATGCTaGCCGGGCCCTGAGCTCCAA | + |
|
Preference number: 5 (lower is better) Translates to: PLCTERYPVTMEYVSIKHSRPSC*PGPELQ Trigger: TTGGAGCTCAGGGCCCGGCAAGCATGATGGCCTACT...ATGTTTTATTGAAACATATTCCATCGTTACAGGATAGCGTTCGGTACACAGTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029770.8 ENSMUST00000197383.5 |
||
| CDS-3UTR CAA 90 bp | GTCCAGGAGTCAGAGACCGTTCCTAGGAAATGTCATTCACCCATGTGCATGAGATATCTCTTGAAATCTTaGCTGCTGCGACCAATGATG | + |
|
Preference number: 5 (lower is better) Translates to: VQESETVPRKCHSPMCMRYLLKS*LLRPMM Trigger: CATCATTGGTCGCAGCAGCAAAGATTTCAAGAGATA...TCTCATGCACATGGGTGAATGACATTTCCTAGGAACGGTCTCTGACTCCTGGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029770.8 ENSMUST00000197383.5 |
||
| CDS-3UTR CAA 90 bp | TTATGTCTGAACATTCCAAACACTGGTCAGACTGGTACAACAGGTAGCAACCACCCACAAATCAGAACGTaGGCCCCAGATCGAACTTCA | + |
|
Preference number: 5 (lower is better) Translates to: LCLNIPNTGQTGTTGSNHPQIRT*APDRTS Trigger: TGAAGTTCGATCTGGGGCCAACGTTCTGATTTGTGG...GTGGTTGCTACCTGTTGTACCAGTCTGACCAGTGTTTGGAATGTTCAGACATAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029770.8 ENSMUST00000197383.5 |
||
| CDS-3UTR CAA 90 bp | TTATGTCTGAACATTCCAAACACTGGTCAGACTGGTACAACAGGTAGCAACCACAAGCATCCTTCCACTTaGGTAGTAATCCTCCAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: LCLNIPNTGQTGTTGSNHKHPST*VVILQQ Trigger: CTGCTGGAGGATTACTACCAAAGTGGAAGGATGCTT...GTGGTTGCTACCTGTTGTACCAGTCTGACCAGTGTTTGGAATGTTCAGACATAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029770.8 |
||
| CDS-3UTR CAA 90 bp | AATCCTCCTAAGACCTTGAGCTTCACACAGGAGATTATGTCTGAACATTCCAAATGCCATCGCCATTCTTaGTTTCTCTCCTCCGCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: NPPKTLSFTQEIMSEHSKCHRHS*FLSSAE Trigger: CTCAGCGGAGGAGAGAAACAAAGAATGGCGATGGCA...TTTGGAATGTTCAGACATAATCTCCTGTGTGAAGCTCAAGGTCTTAGGAGGATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029770.8 ENSMUST00000197383.5 |
||
| CDS-3UTR CAA 90 bp | ATCCAAAATCCTCCTAAGACCTTGAGCTTCACACAGGAGATTATGTCTGAACATTGCCATCGCCATTCTTaGTTTCTCTCCTCCGCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: IQNPPKTLSFTQEIMSEHCHRHS*FLSSAE Trigger: CTCAGCGGAGGAGAGAAACAAAGAATGGCGATGGCA...ATGTTCAGACATAATCTCCTGTGTGAAGCTCAAGGTCTTAGGAGGATTTTGGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029770.8 ENSMUST00000197383.5 |
||
| CDS-3UTR CAA 90 bp | TTATGTCTGAACATTCCAAACACTGGTCAGACTGGTACAACAGGTAGCAACCACCTTGATAAAAACACTTaGTCCACCACAGCTCGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: LCLNIPNTGQTGTTGSNHLDKNT*STTARS Trigger: AGAGCGAGCTGTGGTGGACAAAGTGTTTTTATCAAG...GTGGTTGCTACCTGTTGTACCAGTCTGACCAGTGTTTGGAATGTTCAGACATAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029770.8 ENSMUST00000197383.5 |
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| CDS-3UTR CAA 90 bp | CTCATGTGGCGCTCACCATTATACAACCACATTTCTGATGAGACTGTCCATCTCGGATCTGTGAGAGCCTaGATAAAAACACTTTGTCCA | + |
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Preference number: 5 (lower is better) Translates to: LMWRSPLYNHISDETVHLGSVRA*IKTLCP Trigger: TGGACAAAGTGTTTTTATCAAGGCTCTCACAGATCC...GAGATGGACAGTCTCATCAGAAATGTGGTTGTATAATGGTGAGCGCCACATGAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029770.8 ENSMUST00000197383.5 |
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| CDS-3UTR CAA 90 bp | TTTCAGAGCCCACTCAATCAAACCGATTTCACAACTACGTATGATCACGTTCACGGAAGACTGAGTGGATaGTCTGCTTCTCCCGTTTAT | + |
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Preference number: 5 (lower is better) Translates to: FQSPLNQTDFTTTYDHVHGRLSG*SASPVY Trigger: ATAAACGGGAGAAGCAGACAATCCACTCAGTCTTCC...GTGAACGTGATCATACGTAGTTGTGAAATCGGTTTGATTGAGTGGGCTCTGAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029770.8 |
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| CDS-3UTR CAA 90 bp | ATCCAAAATCCTCCTAAGACCTTGAGCTTCACACAGGAGATTATGTCTGAACATCCACAAATCAGAACGTaGGCCCCAGATCGAACTTCA | + |
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Preference number: 5 (lower is better) Translates to: IQNPPKTLSFTQEIMSEHPQIRT*APDRTS Trigger: TGAAGTTCGATCTGGGGCCAACGTTCTGATTTGTGG...ATGTTCAGACATAATCTCCTGTGTGAAGCTCAAGGTCTTAGGAGGATTTTGGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029770.8 ENSMUST00000197383.5 |
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| CDS-3UTR CAA 90 bp | GTCCAGGAGTCAGAGACCGTTCCTAGGAAATGTCATTCACCCATGTGCATGAGATATGATAAAACAGTCTaGCCATCGCCATTCTTTGTT | + |
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Preference number: 5 (lower is better) Translates to: VQESETVPRKCHSPMCMRYDKTV*PSPFFV Trigger: AACAAAGAATGGCGATGGCAAGACTGTTTTATCATA...TCTCATGCACATGGGTGAATGACATTTCCTAGGAACGGTCTCTGACTCCTGGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029770.8 ENSMUST00000197383.5 |
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| CDS-3UTR CAA 90 bp | TTATGTCTGAACATTCCAAACACTGGTCAGACTGGTACAACAGGTAGCAACCACGGATCTGTGAGAGCCTaGATAAAAACACTTTGTCCA | + |
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Preference number: 5 (lower is better) Translates to: LCLNIPNTGQTGTTGSNHGSVRA*IKTLCP Trigger: TGGACAAAGTGTTTTTATCAAGGCTCTCACAGATCC...GTGGTTGCTACCTGTTGTACCAGTCTGACCAGTGTTTGGAATGTTCAGACATAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029770.8 ENSMUST00000197383.5 |
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| CDS-3UTR CAA 90 bp | CAAACCGATTTCACAACTACGTATGATCACGTTCACTCTCAGCCCTCCTTTGTGTGTCACCATTTGGTGTaGCTAAAGGAACATGATCAA | + |
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Preference number: 5 (lower is better) Translates to: QTDFTTTYDHVHSQPSFVCHHLV*LKEHDQ Trigger: TTGATCATGTTCCTTTAGCAACACCAAATGGTGACA...CACAAAGGAGGGCTGAGAGTGAACGTGATCATACGTAGTTGTGAAATCGGTTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029770.8 ENSMUST00000197383.5 |
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| CDS-3UTR CAA 90 bp | ATAATTGTCATCTTACCAATGGGTCTTCTGAGTCGAGTTAGGAATAGCCCAGAACTTGATAAAAACACTTaGTCCACCACAGCTCGCTCT | + |
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Preference number: 5 (lower is better) Translates to: IIVILPMGLLSRVRNSPELDKNT*STTARS Trigger: AGAGCGAGCTGTGGTGGACAAAGTGTTTTTATCAAG...TTCTGGGCTATTCCTAACTCGACTCAGAAGACCCATTGGTAAGATGACAATTAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000197662.5 |
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| CDS-3UTR CAA 90 bp | CTCATGTGGCGCTCACCATTATACAACCACATTTCTGATGAGACTGTCCATCTCATGGCAGCGATGAAGTaGAATAAGTATCTCTTGAAA | + |
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Preference number: 5 (lower is better) Translates to: LMWRSPLYNHISDETVHLMAAMK*NKYLLK Trigger: TTTCAAGAGATACTTATTCAACTTCATCGCTGCCAT...GAGATGGACAGTCTCATCAGAAATGTGGTTGTATAATGGTGAGCGCCACATGAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029770.8 ENSMUST00000197383.5 |
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| CDS-3UTR CAA 90 bp | CCACTGTGTACCGAACGCTATCCTGTAACGATGGAATATGTTTCAATAAAACATGCAGCTGGTCTGGATTaGCTATTCTGTTATCCAGGT | + |
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Preference number: 5 (lower is better) Translates to: PLCTERYPVTMEYVSIKHAAGLD*LFCYPG Trigger: ACCTGGATAACAGAATAGCAAATCCAGACCAGCTGC...ATGTTTTATTGAAACATATTCCATCGTTACAGGATAGCGTTCGGTACACAGTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029770.8 ENSMUST00000197383.5 |
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| CDS-3UTR CAA 90 bp | CCACTCAATCAAACCGATTTCACAACTACGTATGATCACGTTCACTCTCAGCCCTTCAAAACTAAGGTCTaGGATCAAGATGTCACCATT | + |
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Preference number: 5 (lower is better) Translates to: PLNQTDFTTTYDHVHSQPFKTKV*DQDVTI Trigger: AATGGTGACATCTTGATCCAAGACCTTAGTTTTGAA...GGGCTGAGAGTGAACGTGATCATACGTAGTTGTGAAATCGGTTTGATTGAGTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029770.8 ENSMUST00000197383.5 |
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| CDS-3UTR CAA 90 bp | AATCCTCCTAAGACCTTGAGCTTCACACAGGAGATTATGTCTGAACATTCCAAAATCTGGATATATGACTaGGTCTCTCAGTGTTCCCAG | + |
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Preference number: 5 (lower is better) Translates to: NPPKTLSFTQEIMSEHSKIWIYD*VSQCSQ Trigger: CTGGGAACACTGAGAGACCAAGTCATATATCCAGAT...TTTGGAATGTTCAGACATAATCTCCTGTGTGAAGCTCAAGGTCTTAGGAGGATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029770.8 ENSMUST00000197383.5 |
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| CDS-3UTR CAA 90 bp | ATCCAAAATCCTCCTAAGACCTTGAGCTTCACACAGGAGATTATGTCTGAACATATCTGGATATATGACTaGGTCTCTCAGTGTTCCCAG | + |
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Preference number: 5 (lower is better) Translates to: IQNPPKTLSFTQEIMSEHIWIYD*VSQCSQ Trigger: CTGGGAACACTGAGAGACCAAGTCATATATCCAGAT...ATGTTCAGACATAATCTCCTGTGTGAAGCTCAAGGTCTTAGGAGGATTTTGGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029770.8 ENSMUST00000197383.5 |
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| CDS-3UTR CAA 90 bp | TTATGTCTGAACATTCCAAACACTGGTCAGACTGGTACAACAGGTAGCAACCACATGGCAGCGATGAAGTaGAATAAGTATCTCTTGAAA | + |
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Preference number: 5 (lower is better) Translates to: LCLNIPNTGQTGTTGSNHMAAMK*NKYLLK Trigger: TTTCAAGAGATACTTATTCAACTTCATCGCTGCCAT...GTGGTTGCTACCTGTTGTACCAGTCTGACCAGTGTTTGGAATGTTCAGACATAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029770.8 ENSMUST00000197383.5 |
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| CDS-3UTR CAA 90 bp | TTATGTCTGAACATTCCAAACACTGGTCAGACTGGTACAACAGGTAGCAACCACTTCAAAACTAAGGTCTaGGATCAAGATGTCACCATT | + |
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Preference number: 5 (lower is better) Translates to: LCLNIPNTGQTGTTGSNHFKTKV*DQDVTI Trigger: AATGGTGACATCTTGATCCAAGACCTTAGTTTTGAA...GTGGTTGCTACCTGTTGTACCAGTCTGACCAGTGTTTGGAATGTTCAGACATAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029770.8 ENSMUST00000197383.5 |
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| CDS-3UTR CAA 90 bp | CATTATACAACCACATTTCTGATGAGACTGTCCATCTCTTCACAAAATCCAAAAGCAGCTGGTCTGGATTaGCTATTCTGTTATCCAGGT | + |
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Preference number: 5 (lower is better) Translates to: HYTTTFLMRLSISSQNPKAAGLD*LFCYPG Trigger: ACCTGGATAACAGAATAGCAAATCCAGACCAGCTGC...TTTTGGATTTTGTGAAGAGATGGACAGTCTCATCAGAAATGTGGTTGTATAATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029770.8 ENSMUST00000197383.5 |
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| CDS-3UTR CAA 90 bp | GACAGAGCCATAAAAGTCAAATTAGCTGACTTCAAATGGTTTACATCCCAGGATTGTCACCATTTGGTGTaGCTAAAGGAACATGATCAA | + |
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Preference number: 5 (lower is better) Translates to: DRAIKVKLADFKWFTSQDCHHLV*LKEHDQ Trigger: TTGATCATGTTCCTTTAGCAACACCAAATGGTGACA...ATCCTGGGATGTAAACCATTTGAAGTCAGCTAATTTGACTTTTATGGCTCTGTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029770.8 ENSMUST00000197383.5 |
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| CDS-3UTR CAA 90 bp | ATCCAAAATCCTCCTAAGACCTTGAGCTTCACACAGGAGATTATGTCTGAACATTATGATAAAACAGTCTaGCCATCGCCATTCTTTGTT | + |
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Preference number: 5 (lower is better) Translates to: IQNPPKTLSFTQEIMSEHYDKTV*PSPFFV Trigger: AACAAAGAATGGCGATGGCAAGACTGTTTTATCATA...ATGTTCAGACATAATCTCCTGTGTGAAGCTCAAGGTCTTAGGAGGATTTTGGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029770.8 ENSMUST00000197383.5 |
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| CDS CCA 72 bp | TTCTTACCGTGCAGGCCGAGGGCGCGACGCCGCTTATaGAGTAGGCAGAGCAGCAGGAACGCGGCCCCCGCC | + |
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Preference number: 6 (lower is better) Translates to: FLPCRPRARRRL*SRQSSRNAAPA Trigger: GGCGGGGGCCGCGTTCCTGCTGCTCTGCCTACTCCATAAGCGGCGTCGCGCCCTCGGCCTGCACGGTAAGAA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029770.8 ENSMUST00000197383.5 |
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| CDS CCA 72 bp | TTCTTTCCGTGCAGGCCGAGGGCGCGACGCCGCTTATaGAGTAGGCAGAGCAGCAGGAACGCGGCCCCCGCC | + |
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Preference number: 6 (lower is better) Translates to: FFPCRPRARRRL*SRQSSRNAAPA Trigger: GGCGGGGGCCGCGTTCCTGCTGCTCTGCCTACTCCATAAGCGGCGTCGCGCCCTCGGCCTGCACGGAAAGAA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000197662.5 |
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| CDS TCA 72 bp | TGTAATCCGAGCCGTAAAACTATTAGTGATAAGCCGTaGATTCACGTATCTGTATTCTCCTTCGTACTTCTG | + |
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Preference number: 6 (lower is better) Translates to: CNPSRKTISDKP*IHVSVFSFVLL Trigger: CAGAAGTACGAAGGAGAATACAGATACGTGAATTCACGGCTTATCACTAATAGTTTTACGGCTCGGATTACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197383.5 |
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