Pregenerated sensors for ABCD2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000055782Ensembl transcript IDs: ENSMUST00000069511.8
Found 128 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GTTAACTGGGCTGAAAGAACCCTCAAAGTCCTAATTCTGCACAGCTaGCATCAGTCCTCCTGGTGCCTTTGCTGCTTTGTTTTGGGGCAT | + |
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Preference number: 1 (lower is better) Translates to: VNWAERTLKVLILHS*HQSSWCLCCFVLGH Trigger: ATGCCCCAAAACAAAGCAGCAAAGGCACCAGGAGGACTGATGTCAGCTGTGCAGAATTAGGACTTTGAGGGTTCTTTCAGCCCAGTTAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069511.8 |
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| 3UTR TCA 90 bp | AGAAGATATTTCTCAGTGGTCTTTATGTTCTCACAAGGATGCCTGTaGGAATATCAGCTCCGGTCTCCTGTGGGGCCAGTTTGGAAAGAG | + |
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Preference number: 1 (lower is better) Translates to: RRYFSVVFMFSQGCL*EYQLRSPVGPVWKE Trigger: CTCTTTCCAAACTGGCCCCACAGGAGACCGGAGCTGATATTCTCACAGGCATCCTTGTGAGAACATAAAGACCACTGAGAAATATCTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069511.8 |
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| 3UTR TCA 90 bp | AAGCATCAGTTATGGCTCTGTACTTCAGATGAGCTCTATTTCATATaGCGTACTCATATAGGGTTTTCTCTCGTCATGTTCAGTAGTATG | + |
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Preference number: 1 (lower is better) Translates to: KHQLWLCTSDELYFI*RTHIGFSLVMFSSM Trigger: CATACTACTGAACATGACGAGAGAAAACCCTATATGAGTACGTCATATGAAATAGAGCTCATCTGAAGTACAGAGCCATAACTGATGCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069511.8 |
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| 3UTR CCA 90 bp | TTTTCCTTGTTATTCTTTGTCCTAGTCATAGAAGATATTTCTCAGTaGTCTTTATGTTCTCACAAGGATGCCTGTGAGAATATCAGCTCC | + |
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Preference number: 1 (lower is better) Translates to: FSLLFFVLVIEDISQ*SLCSHKDACENISS Trigger: GGAGCTGATATTCTCACAGGCATCCTTGTGAGAACATAAAGACCACTGAGAAATATCTTCTATGACTAGGACAAAGAATAACAAGGAAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069511.8 |
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| 3UTR-3UTR TCA 90 bp | GATTTTAGGGTGAACACGGCGTCAGACTCATGCTTGGCATACCACAGCATGCTGTCACAAGGATGCCTGTaGGAATATCAGCTCCGGTCT | + |
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Preference number: 2 (lower is better) Translates to: DFRVNTASDSCLAYHSMLSQGCL*EYQLRS Trigger: AGACCGGAGCTGATATTCTCACAGGCATCCTTGTGA...CAGCATGCTGTGGTATGCCAAGCATGAGTCTGACGCCGTGTTCACCCTAAAATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069511.8 |
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| 3UTR-3UTR GCA 90 bp | CTATCGAAGGGAAAACCCTTCCTGTGTAAACATAGGGTAAATCGGGTTGGTTTTAAATCCGCCTGCCTCTaGCTCCTGAGTGCTGGGATT | + |
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Preference number: 2 (lower is better) Translates to: LSKGKPFLCKHRVNRVGFKSACL*LLSAGI Trigger: AATCCCAGCACTCAGGAGGCAGAGGCAGGCGGATTT...AAAACCAACCCGATTTACCCTATGTTTACACAGGAAGGGTTTTCCCTTCGATAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069511.8 |
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| 3UTR-3UTR TCA 90 bp | CTATCGAAGGGAAAACCCTTCCTGTGTAAACATAGGGTAAATCGGGTTGGTTTTGTCCTGCTTTACAGGTaGGTTAGCTTTTCACTGGGC | + |
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Preference number: 2 (lower is better) Translates to: LSKGKPFLCKHRVNRVGFVLLYR*VSFSLG Trigger: GCCCAGTGAAAAGCTAACTCACCTGTAAAGCAGGAC...AAAACCAACCCGATTTACCCTATGTTTACACAGGAAGGGTTTTCCCTTCGATAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000069511.8 |
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| 3UTR-3UTR TCA 90 bp | CACAAATTCACATCACATTCTCCCTCTAAGACAGAGGGTATTTGGTCTCAGAAAGGGCATTCTCCTACATaGAGAACCTCAGGCCACTTT | + |
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Preference number: 2 (lower is better) Translates to: HKFTSHSPSKTEGIWSQKGHSPT*RTSGHF Trigger: AAAGTGGCCTGAGGTTCTTCATGTAGGAGAATGCCC...TTTCTGAGACCAAATACCCTCTGTCTTAGAGGGAGAATGTGATGTGAATTTGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069511.8 |
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| 3UTR-3UTR GCA 90 bp | CTATCGAAGGGAAAACCCTTCCTGTGTAAACATAGGGTAAATCGGGTTGGTTTTTCCTGGTGCCTTTGCTaGTTTGTTTTGGGGCATTCT | + |
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Preference number: 2 (lower is better) Translates to: LSKGKPFLCKHRVNRVGFSWCLC*FVLGHS Trigger: AGAATGCCCCAAAACAAAGCAGCAAAGGCACCAGGA...AAAACCAACCCGATTTACCCTATGTTTACACAGGAAGGGTTTTCCCTTCGATAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000069511.8 |
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| 3UTR-3UTR TCA 90 bp | CTATCGAAGGGAAAACCCTTCCTGTGTAAACATAGGGTAAATCGGGTTGGTTTTAACAATCACTGTGAGTaGCTTCCAGGTAGTCTGTCT | + |
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Preference number: 2 (lower is better) Translates to: LSKGKPFLCKHRVNRVGFNNHCE*LPGSLS Trigger: AGACAGACTACCTGGAAGTCACTCACAGTGATTGTT...AAAACCAACCCGATTTACCCTATGTTTACACAGGAAGGGTTTTCCCTTCGATAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069511.8 |
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| 3UTR-3UTR GCA 90 bp | CAAAGTAATCAAGCTCCACAAATGTACGCCTTTTCTAAGGAAAAGATAAGTAGTACTCAGAAATCCGCCTaGCTCTGCCTCCTGAGTGCT | + |
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Preference number: 2 (lower is better) Translates to: QSNQAPQMYAFSKEKISSTQKSA*LCLLSA Trigger: AGCACTCAGGAGGCAGAGGCAGGCGGATTTCTGAGT...ACTACTTATCTTTTCCTTAGAAAAGGCGTACATTTGTGGAGCTTGATTACTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069511.8 |
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| 3UTR-3UTR GCA 90 bp | GTGATGTCGTTCTTGATTGATTTTAAGTCAAAGACTGATGACCATTGCATTTGCAGAACTCGGGACCCCTaGAAGAGAAGCAACTGCCAT | + |
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Preference number: 2 (lower is better) Translates to: VMSFLIDFKSKTDDHCICRTRDP*KRSNCH Trigger: ATGGCAGTTGCTTCTCTTGCAGGGGTCCCGAGTTCT...GCAAATGCAATGGTCATCAGTCTTTGACTTAAAATCAATCAAGAACGACATCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069511.8 |
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| 3UTR-3UTR TCA 90 bp | CTATCGAAGGGAAAACCCTTCCTGTGTAAACATAGGGTAAATCGGGTTGGTTTTTCACAAGACCTCTATTaGTCTCTACAGCTCTTTCCA | + |
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Preference number: 2 (lower is better) Translates to: LSKGKPFLCKHRVNRVGFSQDLY*SLQLFP Trigger: TGGAAAGAGCTGTAGAGATCAATAGAGGTCTTGTGA...AAAACCAACCCGATTTACCCTATGTTTACACAGGAAGGGTTTTCCCTTCGATAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000069511.8 |
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| 3UTR-3UTR TCA 90 bp | ACAAATTCACATCACATTCTCCCTCTAAGACAGAGGGTATTTGGTCTCAGAAAAGTCTGCATGTATGTATaGGGACTTCATGCATGCAGG | + |
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Preference number: 2 (lower is better) Translates to: TNSHHILPLRQRVFGLRKVCMYV*GLHACR Trigger: CCTGCATGCATGAAGTCCTCATACATACATGCAGAC...TTTTCTGAGACCAAATACCCTCTGTCTTAGAGGGAGAATGTGATGTGAATTTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069511.8 |
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| 3UTR-3UTR TCA 90 bp | CACAAATTCACATCACATTCTCCCTCTAAGACAGAGGGTATTTGGTCTCAGAAATACCTCACCATAGCCTaGGAGAGGATGAGATTAAAG | + |
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Preference number: 2 (lower is better) Translates to: HKFTSHSPSKTEGIWSQKYLTIA*ERMRLK Trigger: CTTTAATCTCATCCTCTCTCAGGCTATGGTGAGGTA...TTTCTGAGACCAAATACCCTCTGTCTTAGAGGGAGAATGTGATGTGAATTTGTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069511.8 |
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| 3UTR-3UTR GCA 90 bp | CTATCGAAGGGAAAACCCTTCCTGTGTAAACATAGGGTAAATCGGGTTGGTTTTAGTCCTAGAAAGTCCTaGTTTACAGGTGAGTTAGCT | + |
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Preference number: 2 (lower is better) Translates to: LSKGKPFLCKHRVNRVGFSPRKS*FTGELA Trigger: AGCTAACTCACCTGTAAAGCAGGACTTTCTAGGACT...AAAACCAACCCGATTTACCCTATGTTTACACAGGAAGGGTTTTCCCTTCGATAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069511.8 |
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| 3UTR-3UTR CCA 90 bp | CACAAATTCACATCACATTCTCCCTCTAAGACAGAGGGTATTTGGTCTCAGAAACAGACACTTCAGCATTaGGTGGATATACATAGGCTG | + |
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Preference number: 2 (lower is better) Translates to: HKFTSHSPSKTEGIWSQKQTLQH*VDIHRL Trigger: CAGCCTATGTATATCCACCCAATGCTGAAGTGTCTG...TTTCTGAGACCAAATACCCTCTGTCTTAGAGGGAGAATGTGATGTGAATTTGTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069511.8 |
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| 3UTR-3UTR GCA 90 bp | GTAACAGACAAATTAAAAAGTACTGACTGGGACCTCATATTGTATTGCTTCATGTCCTCCTGGTGCCTTTaGTGCTTTGTTTTGGGGCAT | + |
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Preference number: 2 (lower is better) Translates to: VTDKLKSTDWDLILYCFMSSWCL*CFVLGH Trigger: ATGCCCCAAAACAAAGCAGCAAAGGCACCAGGAGGA...CATGAAGCAATACAATATGAGGTCCCAGTCAGTACTTTTTAATTTGTCTGTTAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000069511.8 |
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| 3UTR-3UTR GCA 90 bp | CAAAGTAATCAAGCTCCACAAATGTACGCCTTTTCTAAGGAAAAGATAAGTAGTCATCAGTCCTCCTGGTaGCTTTGCTGCTTTGTTTTG | + |
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Preference number: 2 (lower is better) Translates to: QSNQAPQMYAFSKEKISSHQSSW*LCCFVL Trigger: CAAAACAAAGCAGCAAAGGCACCAGGAGGACTGATG...ACTACTTATCTTTTCCTTAGAAAAGGCGTACATTTGTGGAGCTTGATTACTTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000069511.8 |
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| 3UTR-3UTR GCA 90 bp | GTAACAGACAAATTAAAAAGTACTGACTGGGACCTCATATTGTATTGCTTCATGGGTGTGCGCCACCACTaGTTGGCTCACATAATTTTT | + |
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Preference number: 2 (lower is better) Translates to: VTDKLKSTDWDLILYCFMGVRHH*LAHIIF Trigger: AAAAATTATGTGAGCCAAGCAGTGGTGGCGCACACC...CATGAAGCAATACAATATGAGGTCCCAGTCAGTACTTTTTAATTTGTCTGTTAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000069511.8 |
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| 3UTR-3UTR CCA 90 bp | ACAAATTCACATCACATTCTCCCTCTAAGACAGAGGGTATTTGGTCTCAGAAAATTTGCTGCTTTGTTTTaGGGCATTCTCCTACATGAA | + |
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Preference number: 2 (lower is better) Translates to: TNSHHILPLRQRVFGLRKFAALF*GILLHE Trigger: TTCATGTAGGAGAATGCCCCAAAACAAAGCAGCAAA...TTTTCTGAGACCAAATACCCTCTGTCTTAGAGGGAGAATGTGATGTGAATTTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069511.8 |
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| 3UTR-3UTR CCA 90 bp | CTATCGAAGGGAAAACCCTTCCTGTGTAAACATAGGGTAAATCGGGTTGGTTTTTCCTCCTCTTCCGTATaGGTAATTCTCTTTTTAAAA | + |
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Preference number: 2 (lower is better) Translates to: LSKGKPFLCKHRVNRVGFSSSSV*VILFLK Trigger: TTTTAAAAAGAGAATTACCCATACGGAAGAGGAGGA...AAAACCAACCCGATTTACCCTATGTTTACACAGGAAGGGTTTTCCCTTCGATAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000069511.8 |
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| 3UTR-3UTR TCA 90 bp | ACAAATTCACATCACATTCTCCCTCTAAGACAGAGGGTATTTGGTCTCAGAAAAGAGCTCTATTTCATATaGCGTACTCATATAGGGTTT | + |
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Preference number: 2 (lower is better) Translates to: TNSHHILPLRQRVFGLRKELYFI*RTHIGF Trigger: AAACCCTATATGAGTACGTCATATGAAATAGAGCTC...TTTTCTGAGACCAAATACCCTCTGTCTTAGAGGGAGAATGTGATGTGAATTTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069511.8 |
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| 3UTR-3UTR GCA 90 bp | CAAAGTAATCAAGCTCCACAAATGTACGCCTTTTCTAAGGAAAAGATAAGTAGTATACTTGTCCAGCCATaGTTCTTTTCAACCACTGTC | + |
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Preference number: 2 (lower is better) Translates to: QSNQAPQMYAFSKEKISSILVQP*FFSTTV Trigger: GACAGTGGTTGAAAAGAAGCATGGCTGGACAAGTAT...ACTACTTATCTTTTCCTTAGAAAAGGCGTACATTTGTGGAGCTTGATTACTTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000069511.8 |
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| 3UTR-3UTR GCA 90 bp | GTAACAGACAAATTAAAAAGTACTGACTGGGACCTCATATTGTATTGCTTCATGTTCCAAACAGTCTATTaGAAGTTAGCGTCGGCTAAA | + |
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Preference number: 2 (lower is better) Translates to: VTDKLKSTDWDLILYCFMFQTVY*KLASAK Trigger: TTTAGCCGACGCTAACTTGCAATAGACTGTTTGGAA...CATGAAGCAATACAATATGAGGTCCCAGTCAGTACTTTTTAATTTGTCTGTTAC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000069511.8 |
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| 3UTR GCA 72 bp | TGTAGACCAGACTGGTCTCGAACTCAGAAATCCGCCTaGCTCTGCCTCCTGAGTGCTGGGATTAAAGGTGTG | + |
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Preference number: 3 (lower is better) Translates to: CRPDWSRTQKSA*LCLLSAGIKGV Trigger: CACACCTTTAATCCCAGCACTCAGGAGGCAGAGGCAGGCGGATTTCTGAGTTCGAGACCAGTCTGGTCTACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069511.8 |
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| 3UTR-3UTR CAA 90 bp | GATTTTAGGGTGAACACGGCGTCAGACTCATGCTTGGCATACCACAGCATGCTGCAGGTGTTGCACCTATaGTCCTTGTTAACTGGGCTG | + |
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Preference number: 3 (lower is better) Translates to: DFRVNTASDSCLAYHSMLQVLHL*SLLTGL Trigger: CAGCCCAGTTAACAAGGACAATAGGTGCAACACCTG...CAGCATGCTGTGGTATGCCAAGCATGAGTCTGACGCCGTGTTCACCCTAAAATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069511.8 |
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| 3UTR CCA 72 bp | GACATCAGTCCTCCTGGTGCCTTTGCTGCTTTGTTTTaGGGCATTCTCCTACATGAAGAACCTCAGGCCACT | + |
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Preference number: 3 (lower is better) Translates to: DISPPGAFAALF*GILLHEEPQAT Trigger: AGTGGCCTGAGGTTCTTCATGTAGGAGAATGCCCCAAAACAAAGCAGCAAAGGCACCAGGAGGACTGATGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069511.8 |
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| 3UTR-3UTR CAA 90 bp | GATTTTAGGGTGAACACGGCGTCAGACTCATGCTTGGCATACCACAGCATGCTGGTGCGCCACCACTGCTaGGCTCACATAATTTTTAAA | + |
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Preference number: 3 (lower is better) Translates to: DFRVNTASDSCLAYHSMLVRHHC*AHIIFK Trigger: TTTAAAAATTATGTGAGCCAAGCAGTGGTGGCGCAC...CAGCATGCTGTGGTATGCCAAGCATGAGTCTGACGCCGTGTTCACCCTAAAATC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000069511.8 |
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| 3UTR GCA 72 bp | GAAGCTTCAATTCACTGCCCTTCTGAGTGCCGATACTaGAGACACTTCAGCATTGGGTGGATATACATAGGC | + |
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Preference number: 3 (lower is better) Translates to: EASIHCPSECRY*RHFSIGWIYIG Trigger: GCCTATGTATATCCACCCAATGCTGAAGTGTCTGCAGTATCGGCACTCAGAAGGGCAGTGAATTGAAGCTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069511.8 |
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| 3UTR TCA 72 bp | TGCCTTTGCTGCTTTGTTTTGGGGCATTCTCCTACATaGAGAACCTCAGGCCACTTTCTCCTAGTCCTAGAA | + |
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Preference number: 3 (lower is better) Translates to: CLCCFVLGHSPT*RTSGHFLLVLE Trigger: TTCTAGGACTAGGAGAAAGTGGCCTGAGGTTCTTCATGTAGGAGAATGCCCCAAAACAAAGCAGCAAAGGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069511.8 |
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| 3UTR GCA 72 bp | AACCTCAGGCCACTTTCTCCTAGTCCTAGAAAGTCCTaGTTTACAGGTGAGTTAGCTTTTCACTGGGCACTA | + |
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Preference number: 3 (lower is better) Translates to: NLRPLSPSPRKS*FTGELAFHWAL Trigger: TAGTGCCCAGTGAAAAGCTAACTCACCTGTAAAGCAGGACTTTCTAGGACTAGGAGAAAGTGGCCTGAGGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069511.8 |
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| 3UTR CCA 72 bp | TGGATTCCAGGTGTTGCACCTATTGTCCTTGTTAACTaGGCTGAAAGAACCCTCAAAGTCCTAATTCTGCAC | + |
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Preference number: 3 (lower is better) Translates to: WIPGVAPIVLVN*AERTLKVLILH Trigger: GTGCAGAATTAGGACTTTGAGGGTTCTTTCAGCCCAGTTAACAAGGACAATAGGTGCAACACCTGGAATCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069511.8 |
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| 3UTR-3UTR CAA 90 bp | GTGATGTCGTTCTTGATTGATTTTAAGTCAAAGACTGATGACCATTGCATTTGCGGTGCCTTTGCTGCTTaGTTTTGGGGCATTCTCCTA | + |
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Preference number: 3 (lower is better) Translates to: VMSFLIDFKSKTDDHCICGAFAA*FWGILL Trigger: TAGGAGAATGCCCCAAAACAAAGCAGCAAAGGCACC...GCAAATGCAATGGTCATCAGTCTTTGACTTAAAATCAATCAAGAACGACATCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000069511.8 |
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| 3UTR-3UTR CAA 90 bp | CTATCGAAGGGAAAACCCTTCCTGTGTAAACATAGGGTAAATCGGGTTGGTTTTTTGCACCTATTGTCCTaGTTAACTGGGCTGAAAGAA | + |
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Preference number: 3 (lower is better) Translates to: LSKGKPFLCKHRVNRVGFLHLLS*LTGLKE Trigger: TTCTTTCAGCCCAGTTAACAAGGACAATAGGTGCAA...AAAACCAACCCGATTTACCCTATGTTTACACAGGAAGGGTTTTCCCTTCGATAG 42% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000069511.8 |
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| 3UTR-3UTR CAA 90 bp | CACAAATTCACATCACATTCTCCCTCTAAGACAGAGGGTATTTGGTCTCAGAAATCCTTATGCCCTGCTTaGCCTACAATTCCATTTCTA | + |
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Preference number: 3 (lower is better) Translates to: HKFTSHSPSKTEGIWSQKSLCPA*PTIPFL Trigger: TAGAAATGGAATTGTAGGCAAAGCAGGGCATAAGGA...TTTCTGAGACCAAATACCCTCTGTCTTAGAGGGAGAATGTGATGTGAATTTGTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069511.8 |
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| 3UTR-3UTR CAA 90 bp | CTATCGAAGGGAAAACCCTTCCTGTGTAAACATAGGGTAAATCGGGTTGGTTTTGTATGCCTTAAAAGATaGCTTCAAAGGCAGAGTATA | + |
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Preference number: 3 (lower is better) Translates to: LSKGKPFLCKHRVNRVGFVCLKR*LQRQSI Trigger: TATACTCTGCCTTTGAAGCAATCTTTTAAGGCATAC...AAAACCAACCCGATTTACCCTATGTTTACACAGGAAGGGTTTTCCCTTCGATAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000069511.8 |
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| 3UTR TCA 72 bp | TATTCATCTCAGGTTTTTACATACCTCACCATAGCCTaGGAGAGGATGAGATTAAAGCATCAGTTATGGCTC | + |
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Preference number: 3 (lower is better) Translates to: YSSQVFTYLTIA*ERMRLKHQLWL Trigger: GAGCCATAACTGATGCTTTAATCTCATCCTCTCTCAGGCTATGGTGAGGTATGTAAAAACCTGAGATGAATA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000069511.8 |
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| 3UTR TCA 72 bp | TTATGGCTCTGTACTTCAGATGAGCTCTATTTCATATaGCGTACTCATATAGGGTTTTCTCTCGTCATGTTC | + |
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Preference number: 3 (lower is better) Translates to: LWLCTSDELYFI*RTHIGFSLVMF Trigger: GAACATGACGAGAGAAAACCCTATATGAGTACGTCATATGAAATAGAGCTCATCTGAAGTACAGAGCCATAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069511.8 |
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| 3UTR TCA 72 bp | GGAAATGTGGTAATTTCTTACAACAATCACTGTGAGTaGCTTCCAGGTAGTCTGTCTTCCAAACAGTCTATT | + |
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Preference number: 3 (lower is better) Translates to: GNVVISYNNHCE*LPGSLSSKQSI Trigger: AATAGACTGTTTGGAAGACAGACTACCTGGAAGTCACTCACAGTGATTGTTGTAAGAAATTACCACATTTCC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069511.8 |
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| 3UTR-3UTR CAA 90 bp | CAAAGTAATCAAGCTCCACAAATGTACGCCTTTTCTAAGGAAAAGATAAGTAGTGGACCTCATATTGTATaGCTTCATGTAAGGTGGGTA | + |
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Preference number: 3 (lower is better) Translates to: QSNQAPQMYAFSKEKISSGPHIV*LHVRWV Trigger: TACCCACCTTACATGAAGCAATACAATATGAGGTCC...ACTACTTATCTTTTCCTTAGAAAAGGCGTACATTTGTGGAGCTTGATTACTTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069511.8 |
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| 3UTR-3UTR CAA 90 bp | CAAAGTAATCAAGCTCCACAAATGTACGCCTTTTCTAAGGAAAAGATAAGTAGTGCTAATGTAAGACATTaGCTTCAAATGTTTCCCCTT | + |
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Preference number: 3 (lower is better) Translates to: QSNQAPQMYAFSKEKISSANVRH*LQMFPL Trigger: AAGGGGAAACATTTGAAGCAAATGTCTTACATTAGC...ACTACTTATCTTTTCCTTAGAAAAGGCGTACATTTGTGGAGCTTGATTACTTTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000069511.8 |
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| 3UTR CCA 72 bp | TTATTCTTTGTCCTAGTCATAGAAGATATTTCTCAGTaGTCTTTATGTTCTCACAAGGATGCCTGTGAGAAT | + |
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Preference number: 3 (lower is better) Translates to: LFFVLVIEDISQ*SLCSHKDACEN Trigger: ATTCTCACAGGCATCCTTGTGAGAACATAAAGACCACTGAGAAATATCTTCTATGACTAGGACAAAGAATAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069511.8 |
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| CDS-3UTR GCA 90 bp | GATTTTAGGGTGAACACGGCGTCAGACTCATGCTTGGCATACCACAGCATGCTGGGGCCCTATAGGGCTTaGTCCTCTGGATGTAGCTGT | + |
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Preference number: 4 (lower is better) Translates to: DFRVNTASDSCLAYHSMLGPYRA*SSGCSC Trigger: ACAGCTACATCCAGAGGAGCAAGCCCTATAGGGCCC...CAGCATGCTGTGGTATGCCAAGCATGAGTCTGACGCCGTGTTCACCCTAAAATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069511.8 |
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| CDS-3UTR TCA 90 bp | GATTTTAGGGTGAACACGGCGTCAGACTCATGCTTGGCATACCACAGCATGCTGAGGTTGGAATACAGGTaGGCCACAGATTGCGAGAAC | + |
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Preference number: 4 (lower is better) Translates to: DFRVNTASDSCLAYHSMLRLEYR*ATDCEN Trigger: GTTCTCGCAATCTGTGGCTCACCTGTATTCCAACCT...CAGCATGCTGTGGTATGCCAAGCATGAGTCTGACGCCGTGTTCACCCTAAAATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069511.8 |
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| 3UTR CAA 72 bp | CCGGTCTCCTGTGGGGCCAGTTTGGAAAGAGTCGGATaGTACACAACACAAATTCACATCACATTCTCCCTC | + |
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Preference number: 4 (lower is better) Translates to: PVSCGASLERVG*YTTQIHITFSL Trigger: GAGGGAGAATGTGATGTGAATTTGTGTTGTGTACAATCCGACTCTTTCCAAACTGGCCCCACAGGAGACCGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069511.8 |
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| 3UTR CAA 72 bp | AATTCTGCACAGCTGACATCAGTCCTCCTGGTGCCTTaGCTGCTTTGTTTTGGGGCATTCTCCTACATGAAG | + |
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Preference number: 4 (lower is better) Translates to: NSAQLTSVLLVP*LLCFGAFSYMK Trigger: CTTCATGTAGGAGAATGCCCCAAAACAAAGCAGCAAAGGCACCAGGAGGACTGATGTCAGCTGTGCAGAATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069511.8 |
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| CDS-3UTR CCA 90 bp | GATTTTAGGGTGAACACGGCGTCAGACTCATGCTTGGCATACCACAGCATGCTGTTTTCCCACAACCGTTaGGACCAGTTATCAAGAGAT | + |
|
Preference number: 4 (lower is better) Translates to: DFRVNTASDSCLAYHSMLFSHNR*DQLSRD Trigger: ATCTCTTGATAACTGGTCCCAACGGTTGTGGGAAAA...CAGCATGCTGTGGTATGCCAAGCATGAGTCTGACGCCGTGTTCACCCTAAAATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069511.8 |
||
| CDS-3UTR CCA 90 bp | GATTTTAGGGTGAACACGGCGTCAGACTCATGCTTGGCATACCACAGCATGCTGGTCTTTTCTGCAGTTTaGATTGTTTTCAGCACCGAG | + |
|
Preference number: 4 (lower is better) Translates to: DFRVNTASDSCLAYHSMLVFSAV*IVFSTE Trigger: CTCGGTGCTGAAAACAATCCAAACTGCAGAAAAGAC...CAGCATGCTGTGGTATGCCAAGCATGAGTCTGACGCCGTGTTCACCCTAAAATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000069511.8 |
||
| CDS-3UTR CCA 90 bp | GTGATGTCGTTCTTGATTGATTTTAAGTCAAAGACTGATGACCATTGCATTTGCATTAGAGCCACCGAGTaGAGGCAGAGCCACCCCGTT | + |
|
Preference number: 4 (lower is better) Translates to: VMSFLIDFKSKTDDHCICIRATE*RQSHPV Trigger: AACGGGGTGGCTCTGCCTCCACTCGGTGGCTCTAAT...GCAAATGCAATGGTCATCAGTCTTTGACTTAAAATCAATCAAGAACGACATCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069511.8 |
||
| CDS-3UTR GCA 90 bp | GATTTTAGGGTGAACACGGCGTCAGACTCATGCTTGGCATACCACAGCATGCTGATAATAAGTCTGATTTaGGAAATAGGTCTCATAGGC | + |
|
Preference number: 4 (lower is better) Translates to: DFRVNTASDSCLAYHSMLIISLI*EIGLIG Trigger: GCCTATGAGACCTATTTCGCAAATCAGACTTATTAT...CAGCATGCTGTGGTATGCCAAGCATGAGTCTGACGCCGTGTTCACCCTAAAATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069511.8 |
||
| CDS-3UTR GCA 90 bp | GTAACAGACAAATTAAAAAGTACTGACTGGGACCTCATATTGTATTGCTTCATGGCCATGCCCATTCTCTaGTTCTCCCCTCCGGAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: VTDKLKSTDWDLILYCFMAMPIL*FSPPER Trigger: CCTTTCCGGAGGGGAGAAGCAGAGAATGGGCATGGC...CATGAAGCAATACAATATGAGGTCCCAGTCAGTACTTTTTAATTTGTCTGTTAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000069511.8 |
||
| 3UTR CAA 72 bp | AGCAATGCTGATTATGGATTCCAGGTGTTGCACCTATaGTCCTTGTTAACTGGGCTGAAAGAACCCTCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: SNADYGFQVLHL*SLLTGLKEPSK Trigger: CTTTGAGGGTTCTTTCAGCCCAGTTAACAAGGACAATAGGTGCAACACCTGGAATCCATAATCAGCATTGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069511.8 |
||
| CDS-3UTR GCA 90 bp | GTGATGTCGTTCTTGATTGATTTTAAGTCAAAGACTGATGACCATTGCATTTGCGTAAGCTTCTGCTTTTaGCTTCCTGTGGCCAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: VMSFLIDFKSKTDDHCICVSFCF*LPVARL Trigger: CAGCCTGGCCACAGGAAGGCAAAAGCAGAAGCTTAC...GCAAATGCAATGGTCATCAGTCTTTGACTTAAAATCAATCAAGAACGACATCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069511.8 |
||
| CDS-3UTR CCA 90 bp | ACAAATTCACATCACATTCTCCCTCTAAGACAGAGGGTATTTGGTCTCAGAAAAGTCTCTGTTGCATTTTaGGAATTCCAGCGAGCTGCG | + |
|
Preference number: 4 (lower is better) Translates to: TNSHHILPLRQRVFGLRKVSVAF*EFQRAA Trigger: CGCAGCTCGCTGGAATTCCCAAAATGCAACAGAGAC...TTTTCTGAGACCAAATACCCTCTGTCTTAGAGGGAGAATGTGATGTGAATTTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069511.8 |
||
| CDS-3UTR TCA 90 bp | ACAAATTCACATCACATTCTCCCTCTAAGACAGAGGGTATTTGGTCTCAGAAAATCCCTTCTTCCACTTTaGAGTTTAGCCTGGAAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: TNSHHILPLRQRVFGLRKSLLPL*SLAWKP Trigger: TGGCTTCCAGGCTAAACTTCAAAGTGGAAGAAGGGA...TTTTCTGAGACCAAATACCCTCTGTCTTAGAGGGAGAATGTGATGTGAATTTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069511.8 |
||
| CDS-3UTR TCA 90 bp | ATTTCTAGACATTTACCTGGCCCACATAATTTTATTTTTCCCGAGACAGGGTTTCATCTTTCCAGTCCATaGCTGCATCCCATCCTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: ISRHLPGPHNFIFPETGFHLSSP*LHPILL Trigger: AAGGAGGATGGGATGCAGTCATGGACTGGAAAGATG...AAACCCTGTCTCGGGAAAAATAAAATTATGTGGGCCAGGTAAATGTCTAGAAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000069511.8 |
||
| CDS-3UTR GCA 90 bp | GTAACAGACAAATTAAAAAGTACTGACTGGGACCTCATATTGTATTGCTTCATGAGGCGAGTAAGCTTCTaGTTTTGCCTTCCTGTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: VTDKLKSTDWDLILYCFMRRVSF*FCLPVA Trigger: GGCCACAGGAAGGCAAAAGCAGAAGCTTACTCGCCT...CATGAAGCAATACAATATGAGGTCCCAGTCAGTACTTTTTAATTTGTCTGTTAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000069511.8 |
||
| CDS-3UTR GCA 90 bp | CTATCGAAGGGAAAACCCTTCCTGTGTAAACATAGGGTAAATCGGGTTGGTTTTTGCGACTCCAACTTTTaGTTTTCCTCACTCAACGTT | + |
|
Preference number: 4 (lower is better) Translates to: LSKGKPFLCKHRVNRVGFCDSNF*FSSLNV Trigger: AACGTTGAGTGAGGAAAAGCAAAAGTTGGAGTCGCA...AAAACCAACCCGATTTACCCTATGTTTACACAGGAAGGGTTTTCCCTTCGATAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000069511.8 |
||
| CDS-3UTR CCA 90 bp | GTAACAGACAAATTAAAAAGTACTGACTGGGACCTCATATTGTATTGCTTCATGTCTTCGGTAAGAGACTaGTCAGGGTTTGCCAGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: VTDKLKSTDWDLILYCFMSSVRD*SGFASL Trigger: GAGGCTGGCAAACCCTGACCAGTCTCTTACCGAAGA...CATGAAGCAATACAATATGAGGTCCCAGTCAGTACTTTTTAATTTGTCTGTTAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000069511.8 |
||
| 3UTR CAA 72 bp | GGGTGGATATACATAGGCTGTGGTGTGATGTCGTTCTaGATTGATTTTAAGTCAAAGACTGATGACCATTGC | + |
|
Preference number: 4 (lower is better) Translates to: GWIYIGCGVMSF*IDFKSKTDDHC Trigger: GCAATGGTCATCAGTCTTTGACTTAAAATCAATCAAGAACGACATCACACCACAGCCTATGTATATCCACCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069511.8 |
||
| CDS-3UTR TCA 90 bp | GTGATGTCGTTCTTGATTGATTTTAAGTCAAAGACTGATGACCATTGCATTTGCCTTCTACATTGGCTATaGTTCGGGAGTGGACATACC | + |
|
Preference number: 4 (lower is better) Translates to: VMSFLIDFKSKTDDHCICLLHWL*FGSGHT Trigger: GGTATGTCCACTCCCGAATCATAGCCAATGTAGAAG...GCAAATGCAATGGTCATCAGTCTTTGACTTAAAATCAATCAAGAACGACATCAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069511.8 |
||
| CDS-3UTR TCA 90 bp | GTAACAGACAAATTAAAAAGTACTGACTGGGACCTCATATTGTATTGCTTCATGGCCCGCTTAAGATTCTaGAGAGAGAGCTTTTCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: VTDKLKSTDWDLILYCFMARLRF*RESFSH Trigger: GTGGGAAAAGCTCTCTCTTCAGAATCTTAAGCGGGC...CATGAAGCAATACAATATGAGGTCCCAGTCAGTACTTTTTAATTTGTCTGTTAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000069511.8 |
||
| CDS-3UTR TCA 90 bp | ATTTCTAGACATTTACCTGGCCCACATAATTTTATTTTTCCCGAGACAGGGTTTGCCCCAATAGCAGCCTaGAATATCTTTCCTTCAACG | + |
|
Preference number: 4 (lower is better) Translates to: ISRHLPGPHNFIFPETGFAPIAA*NIFPST Trigger: CGTTGAAGGAAAGATATTTCAGGCTGCTATTGGGGC...AAACCCTGTCTCGGGAAAAATAAAATTATGTGGGCCAGGTAAATGTCTAGAAAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000069511.8 |
||
| CDS-3UTR GCA 90 bp | GTAACAGACAAATTAAAAAGTACTGACTGGGACCTCATATTGTATTGCTTCATGTTCCTGTGGCCAGGCTaGTTTAAACGCTTGCCAATG | + |
|
Preference number: 4 (lower is better) Translates to: VTDKLKSTDWDLILYCFMFLWPG*FKRLPM Trigger: CATTGGCAAGCGTTTAAAGCAGCCTGGCCACAGGAA...CATGAAGCAATACAATATGAGGTCCCAGTCAGTACTTTTTAATTTGTCTGTTAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000069511.8 |
||
| CDS-3UTR GCA 90 bp | CAAAGTAATCAAGCTCCACAAATGTACGCCTTTTCTAAGGAAAAGATAAGTAGTCTCCAGATCACCATCTaGAAAGCCCGTTGCAGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: QSNQAPQMYAFSKEKISSLQITI*KARCSD Trigger: ATCACTGCAACGGGCTTTGCAGATGGTGATCTGGAG...ACTACTTATCTTTTCCTTAGAAAAGGCGTACATTTGTGGAGCTTGATTACTTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069511.8 |
||
| CDS-3UTR GCA 90 bp | GTGATGTCGTTCTTGATTGATTTTAAGTCAAAGACTGATGACCATTGCATTTGCTTCCTTCAACGTCGATaGTCACGGCACTGGTACATT | + |
|
Preference number: 4 (lower is better) Translates to: VMSFLIDFKSKTDDHCICFLQRR*SRHWYI Trigger: AATGTACCAGTGCCGTGAGCATCGACGTTGAAGGAA...GCAAATGCAATGGTCATCAGTCTTTGACTTAAAATCAATCAAGAACGACATCAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069511.8 |
||
| CDS-3UTR CCA 90 bp | ATTTCTAGACATTTACCTGGCCCACATAATTTTATTTTTCCCGAGACAGGGTTTGCCACCCCGTTTCAGTaGTCACAAGTTTTGGAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: ISRHLPGPHNFIFPETGFATPFQ*SQVLER Trigger: TCTTTCCAAAACTTGTGACCACTGAAACGGGGTGGC...AAACCCTGTCTCGGGAAAAATAAAATTATGTGGGCCAGGTAAATGTCTAGAAAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000069511.8 |
||
| CDS-3UTR TCA 90 bp | ACAAATTCACATCACATTCTCCCTCTAAGACAGAGGGTATTTGGTCTCAGAAAATTAAACGCTTGCCAATaGTGGGATAGAGGGTTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: TNSHHILPLRQRVFGLRKLNACQ*WDRGFS Trigger: TGAAAACCCTCTATCCCATCATTGGCAAGCGTTTAA...TTTTCTGAGACCAAATACCCTCTGTCTTAGAGGGAGAATGTGATGTGAATTTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069511.8 |
||
| CDS-3UTR TCA 90 bp | CAAAGTAATCAAGCTCCACAAATGTACGCCTTTTCTAAGGAAAAGATAAGTAGTACGCATGTCATCCGCTaGGTCAGGGTAAATTACTTG | + |
|
Preference number: 4 (lower is better) Translates to: QSNQAPQMYAFSKEKISSTHVIR*VRVNYL Trigger: CAAGTAATTTACCCTGACTCAGCGGATGACATGCGT...ACTACTTATCTTTTCCTTAGAAAAGGCGTACATTTGTGGAGCTTGATTACTTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069511.8 |
||
| CDS-3UTR TCA 90 bp | CTATCGAAGGGAAAACCCTTCCTGTGTAAACATAGGGTAAATCGGGTTGGTTTTTCGAATTGTAATAGATaGGTGTGGTATTTCCACAGA | + |
|
Preference number: 4 (lower is better) Translates to: LSKGKPFLCKHRVNRVGFSNCNR*VWYFHR Trigger: TCTGTGGAAATACCACACTCATCTATTACAATTCGA...AAAACCAACCCGATTTACCCTATGTTTACACAGGAAGGGTTTTCCCTTCGATAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000069511.8 |
||
| CDS-3UTR GCA 90 bp | ATTTCTAGACATTTACCTGGCCCACATAATTTTATTTTTCCCGAGACAGGGTTTATCTGCAAAGCCCGTTaGAGTGATAATGGGTATAGC | + |
|
Preference number: 4 (lower is better) Translates to: ISRHLPGPHNFIFPETGFICKAR*SDNGYS Trigger: GCTATACCCATTATCACTGCAACGGGCTTTGCAGAT...AAACCCTGTCTCGGGAAAAATAAAATTATGTGGGCCAGGTAAATGTCTAGAAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000069511.8 |
||
| CDS-3UTR GCA 90 bp | ACAAATTCACATCACATTCTCCCTCTAAGACAGAGGGTATTTGGTCTCAGAAAACCAGTTATCAAGAGATaGATCCCTTCTTCCACTTTG | + |
|
Preference number: 4 (lower is better) Translates to: TNSHHILPLRQRVFGLRKPVIKR*IPSSTL Trigger: CAAAGTGGAAGAAGGGATGCATCTCTTGATAACTGG...TTTTCTGAGACCAAATACCCTCTGTCTTAGAGGGAGAATGTGATGTGAATTTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069511.8 |
||
| CDS-3UTR GCA 90 bp | GTAACAGACAAATTAAAAAGTACTGACTGGGACCTCATATTGTATTGCTTCATGTTTCCAGTCCATGACTaGATCCCATCCTCCTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: VTDKLKSTDWDLILYCFMFPVHD*IPSSFS Trigger: AGAGAAGGAGGATGGGATGCAGTCATGGACTGGAAA...CATGAAGCAATACAATATGAGGTCCCAGTCAGTACTTTTTAATTTGTCTGTTAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000069511.8 |
||
| CDS-3UTR CCA 90 bp | CAAAGTAATCAAGCTCCACAAATGTACGCCTTTTCTAAGGAAAAGATAAGTAGTCACCACTTCGCCCGCTaGTGTAATTATGGGAACATT | + |
|
Preference number: 4 (lower is better) Translates to: QSNQAPQMYAFSKEKISSHHFAR*CNYGNI Trigger: AATGTTCCCATAATTACACCAGCGGGCGAAGTGGTG...ACTACTTATCTTTTCCTTAGAAAAGGCGTACATTTGTGGAGCTTGATTACTTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069511.8 |
||
| CDS-3UTR CCA 90 bp | CTATCGAAGGGAAAACCCTTCCTGTGTAAACATAGGGTAAATCGGGTTGGTTTTCATGTATGGCCTCTGTaGAATATAGAACATATGTTG | + |
|
Preference number: 4 (lower is better) Translates to: LSKGKPFLCKHRVNRVGFHVWPL*NIEHML Trigger: CAACATATGTTCTATATTCCACAGAGGCCATACATG...AAAACCAACCCGATTTACCCTATGTTTACACAGGAAGGGTTTTCCCTTCGATAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069511.8 |
||
| CDS-3UTR CCA 90 bp | GTAACAGACAAATTAAAAAGTACTGACTGGGACCTCATATTGTATTGCTTCATGAAGGCCTGTGTGTTATaGAGAGTAGGGAAATCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: VTDKLKSTDWDLILYCFMKACVL*RVGKSQ Trigger: CTGGGATTTCCCTACTCTCCATAACACACAGGCCTT...CATGAAGCAATACAATATGAGGTCCCAGTCAGTACTTTTTAATTTGTCTGTTAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000069511.8 |
||
| CDS-3UTR GCA 90 bp | GTGATGTCGTTCTTGATTGATTTTAAGTCAAAGACTGATGACCATTGCATTTGCAGTTCTAAAGGCCAATaGCAGTTTGCATTCCAGGTA | + |
|
Preference number: 4 (lower is better) Translates to: VMSFLIDFKSKTDDHCICSSKGQ*QFAFQV Trigger: TACCTGGAATGCAAACTGGCATTGGCCTTTAGAACT...GCAAATGCAATGGTCATCAGTCTTTGACTTAAAATCAATCAAGAACGACATCAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069511.8 |
||
| CDS-3UTR GCA 90 bp | CAAAGTAATCAAGCTCCACAAATGTACGCCTTTTCTAAGGAAAAGATAAGTAGTCATAATCCTTTCAATTaGATCAGCTCCAGAGGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: QSNQAPQMYAFSKEKISSHNPFN*ISSRGQ Trigger: CTGGCCTCTGGAGCTGATGCAATTGAAAGGATTATG...ACTACTTATCTTTTCCTTAGAAAAGGCGTACATTTGTGGAGCTTGATTACTTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069511.8 |
||
| CDS-3UTR GCA 90 bp | GTAACAGACAAATTAAAAAGTACTGACTGGGACCTCATATTGTATTGCTTCATGTCGTTGAGTCTCTGTTaGATTTTGGGAATTCCAGCG | + |
|
Preference number: 4 (lower is better) Translates to: VTDKLKSTDWDLILYCFMSLSLC*ILGIPA Trigger: CGCTGGAATTCCCAAAATGCAACAGAGACTCAACGA...CATGAAGCAATACAATATGAGGTCCCAGTCAGTACTTTTTAATTTGTCTGTTAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000069511.8 |
||
| CDS-3UTR CCA 90 bp | ACAAATTCACATCACATTCTCCCTCTAAGACAGAGGGTATTTGGTCTCAGAAAAAGTGGTCACAAGTTTTaGAAAGAGGATTTTCCGAAG | + |
|
Preference number: 4 (lower is better) Translates to: TNSHHILPLRQRVFGLRKSGHKF*KEDFPK Trigger: CTTCGGAAAATCCTCTTTCCAAAACTTGTGACCACT...TTTTCTGAGACCAAATACCCTCTGTCTTAGAGGGAGAATGTGATGTGAATTTGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000069511.8 |
||
| 3UTR CAA 72 bp | TTTCCTCTTGTGCCTTTCAGAGCTAATGTAAGACATTaGCTTCAAATGTTTCCCCTTTATCAAATAACCTGG | + |
|
Preference number: 4 (lower is better) Translates to: FPLVPFRANVRH*LQMFPLYQITW Trigger: CCAGGTTATTTGATAAAGGGGAAACATTTGAAGCAAATGTCTTACATTAGCTCTGAAAGGCACAAGAGGAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069511.8 |
||
| CDS-3UTR TCA 90 bp | GTAACAGACAAATTAAAAAGTACTGACTGGGACCTCATATTGTATTGCTTCATGTTTCAGGTTCCTGAGTaGCAGTTCTCTTATAAATGC | + |
|
Preference number: 4 (lower is better) Translates to: VTDKLKSTDWDLILYCFMFQVPE*QFSYKC Trigger: GCATTTATAAGAGAACTGTCACTCAGGAACCTGAAA...CATGAAGCAATACAATATGAGGTCCCAGTCAGTACTTTTTAATTTGTCTGTTAC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000069511.8 |
||
| CDS-3UTR GCA 90 bp | GTAACAGACAAATTAAAAAGTACTGACTGGGACCTCATATTGTATTGCTTCATGATGATCTCCGTGCAATaGAGTATTTCTCTGTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: VTDKLKSTDWDLILYCFMMISVQ*SISLFS Trigger: AGAGAACAGAGAAATACTGCATTGCACGGAGATCAT...CATGAAGCAATACAATATGAGGTCCCAGTCAGTACTTTTTAATTTGTCTGTTAC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000069511.8 |
||
| CDS-3UTR GCA 90 bp | ATTTCTAGACATTTACCTGGCCCACATAATTTTATTTTTCCCGAGACAGGGTTTCAGTTCTCTTATAAATaGCTCTCTTCACTTCATCGA | + |
|
Preference number: 4 (lower is better) Translates to: ISRHLPGPHNFIFPETGFQFSYK*LSSLHR Trigger: TCGATGAAGTGAAGAGAGGCATTTATAAGAGAACTG...AAACCCTGTCTCGGGAAAAATAAAATTATGTGGGCCAGGTAAATGTCTAGAAAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000069511.8 |
||
| CDS-3UTR GCA 90 bp | ATTTCTAGACATTTACCTGGCCCACATAATTTTATTTTTCCCGAGACAGGGTTTACATTCATCCAGCAATaGATACTTCGGTTTATGGTA | + |
|
Preference number: 4 (lower is better) Translates to: ISRHLPGPHNFIFPETGFTFIQQ*ILRFMV Trigger: TACCATAAACCGAAGTATGCATTGCTGGATGAATGT...AAACCCTGTCTCGGGAAAAATAAAATTATGTGGGCCAGGTAAATGTCTAGAAAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000069511.8 |
||
| CDS-3UTR GCA 90 bp | ACAAATTCACATCACATTCTCCCTCTAAGACAGAGGGTATTTGGTCTCAGAAAATTAGGATGTCTTTTCTaGAGTTTGGATTGTTTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: TNSHHILPLRQRVFGLRKLGCLF*SLDCFQ Trigger: CTGAAAACAATCCAAACTGCAGAAAAGACATCCTAA...TTTTCTGAGACCAAATACCCTCTGTCTTAGAGGGAGAATGTGATGTGAATTTGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000069511.8 |
||
| CDS GCA 90 bp | TTCCGGGCAGTGGTGAAGGCCTCTGTCCGATCGCTAACCATAGCCTaGTTTGGACCATCCTCCAGATCACCATCTGCAAAGCCCGTTGCA | + |
|
Preference number: 5 (lower is better) Translates to: FRAVVKASVRSLTIA*FGPSSRSPSAKPVA Trigger: TGCAACGGGCTTTGCAGATGGTGATCTGGAGGATGGTCCAAAGCAGGCTATGGTTAGCGATCGGACAGAGGCCTTCACCACTGCCCGGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069511.8 |
||
| CDS CCA 90 bp | GGCAGTGGTGAAGGCCTCTGTCCGATCGCTAACCATAGCCTGCTTTaGACCATCCTCCAGATCACCATCTGCAAAGCCCGTTGCAGTGAT | + |
|
Preference number: 5 (lower is better) Translates to: GSGEGLCPIANHSLL*TILQITICKARCSD Trigger: ATCACTGCAACGGGCTTTGCAGATGGTGATCTGGAGGATGGTCCAAAGCAGGCTATGGTTAGCGATCGGACAGAGGCCTTCACCACTGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069511.8 |
||
| CDS-3UTR CAA 90 bp | GATTTTAGGGTGAACACGGCGTCAGACTCATGCTTGGCATACCACAGCATGCTGATCCCTTCTTCCACTTaGAAGTTTAGCCTGGAAGCC | + |
|
Preference number: 5 (lower is better) Translates to: DFRVNTASDSCLAYHSMLIPSST*KFSLEA Trigger: GGCTTCCAGGCTAAACTTCAAAGTGGAAGAAGGGAT...CAGCATGCTGTGGTATGCCAAGCATGAGTCTGACGCCGTGTTCACCCTAAAATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069511.8 |
||
| CDS-3UTR CAA 90 bp | GATTTTAGGGTGAACACGGCGTCAGACTCATGCTTGGCATACCACAGCATGCTGCCATCCTCCTTCTCTTaGAACTATGTGGTAGAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: DFRVNTASDSCLAYHSMLPSSFS*NYVVEV Trigger: CACCTCTACCACATAGTTCAAAGAGAAGGAGGATGG...CAGCATGCTGTGGTATGCCAAGCATGAGTCTGACGCCGTGTTCACCCTAAAATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069511.8 |
||
| CDS GCA 90 bp | CTCCTTCTCTTTGAACTATGTGGTAGAGGTGCACGCTGTGCAGGATaGGTTCTAGGTCTTGGTCAGTGTAACCTTTCTCACGCATGTCAT | + |
|
Preference number: 5 (lower is better) Translates to: LLLFELCGRGARCAG*VLGLGQCNLSHACH Trigger: ATGACATGCGTGAGAAAGGTTACACTGACCAAGACCTAGAACGCATCCTGCACAGCGTGCACCTCTACCACATAGTTCAAAGAGAAGGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069511.8 |
||
| CDS-3UTR CAA 90 bp | GATTTTAGGGTGAACACGGCGTCAGACTCATGCTTGGCATACCACAGCATGCTGGCAATTTCTTCTACATaGGCTATGATTCGGGAGTGG | + |
|
Preference number: 5 (lower is better) Translates to: DFRVNTASDSCLAYHSMLAISST*AMIREW Trigger: CCACTCCCGAATCATAGCCAATGTAGAAGAAATTGC...CAGCATGCTGTGGTATGCCAAGCATGAGTCTGACGCCGTGTTCACCCTAAAATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069511.8 |
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| CDS TCA 90 bp | CTACCTTATGTCCTCTGTAGAAGGCAATTTCTTCTACATTGGCTATaGTTCGGGAGTGGACATACCGCAGGTAGCCTTTCCTGTGGGCTT | + |
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Preference number: 5 (lower is better) Translates to: LPYVLCRRQFLLHWL*FGSGHTAGSLSCGL Trigger: AAGCCCACAGGAAAGGCTACCTGCGGTATGTCCACTCCCGAATCATAGCCAATGTAGAAGAAATTGCCTTCTACAGAGGACATAAGGTAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069511.8 |
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| CDS-3UTR CAA 90 bp | GATTTTAGGGTGAACACGGCGTCAGACTCATGCTTGGCATACCACAGCATGCTGTTTCTGCAGTTTGGATaGTTTTCAGCACCGAGTCTT | + |
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Preference number: 5 (lower is better) Translates to: DFRVNTASDSCLAYHSMLFLQFG*FSAPSL Trigger: AAGACTCGGTGCTGAAAACAATCCAAACTGCAGAAA...CAGCATGCTGTGGTATGCCAAGCATGAGTCTGACGCCGTGTTCACCCTAAAATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069511.8 |
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| CDS TCA 90 bp | TATAAAGGACTCCTTCATACACAGGCCACAGCCCGCTTAAGATTCTaGAGAGAGAGCTTTTCCCACAACCGTTGGGACCAGTTATCAAGA | + |
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Preference number: 5 (lower is better) Translates to: YKGLLHTQATARLRF*RESFSHNRWDQLSR Trigger: TCTTGATAACTGGTCCCAACGGTTGTGGGAAAAGCTCTCTCTTCAGAATCTTAAGCGGGCTGTGGCCTGTGTATGAAGGAGTCCTTTATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069511.8 |
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| CDS TCA 90 bp | TCGCCCGCTGGTGTAATTATGGGAACATTTTCACAAATGATTCCATaGTCCACATCAATAACTGTTCCTTTGATGGCCAGGGTGTCGCTG | + |
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Preference number: 5 (lower is better) Translates to: SPAGVIMGTFSQMIP*STSITVPLMARVSL Trigger: CAGCGACACCCTGGCCATCAAAGGAACAGTTATTGATGTGGATCATGGAATCATTTGTGAAAATGTTCCCATAATTACACCAGCGGGCGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069511.8 |
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| CDS-3UTR CAA 90 bp | CTATCGAAGGGAAAACCCTTCCTGTGTAAACATAGGGTAAATCGGGTTGGTTTTCTGCGACTCCAACTTTaGCTTTTCCTCACTCAACGT | + |
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Preference number: 5 (lower is better) Translates to: LSKGKPFLCKHRVNRVGFLRLQL*LFLTQR Trigger: ACGTTGAGTGAGGAAAAGCAAAAGTTGGAGTCGCAG...AAAACCAACCCGATTTACCCTATGTTTACACAGGAAGGGTTTTCCCTTCGATAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000069511.8 |
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| CDS-3UTR CAA 90 bp | CACAAATTCACATCACATTCTCCCTCTAAGACAGAGGGTATTTGGTCTCAGAAAGTCAGGGTAAATTACTaGATCCCGGAGACTTCCAAG | + |
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Preference number: 5 (lower is better) Translates to: HKFTSHSPSKTEGIWSQKVRVNY*IPETSK Trigger: CTTGGAAGTCTCCGGGATCAAGTAATTTACCCTGAC...TTTCTGAGACCAAATACCCTCTGTCTTAGAGGGAGAATGTGATGTGAATTTGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069511.8 |
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| CDS-3UTR CAA 90 bp | CTATCGAAGGGAAAACCCTTCCTGTGTAAACATAGGGTAAATCGGGTTGGTTTTTCTTCCCCCAGAATTTaGCATAGTTCGTTGAGTCTC | + |
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Preference number: 5 (lower is better) Translates to: LSKGKPFLCKHRVNRVGFSSPRI*HSSLSL Trigger: GAGACTCAACGAACTATGCAAAATTCTGGGGGAAGA...AAAACCAACCCGATTTACCCTATGTTTACACAGGAAGGGTTTTCCCTTCGATAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000069511.8 |
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| CDS-3UTR CAA 90 bp | ACAAATTCACATCACATTCTCCCTCTAAGACAGAGGGTATTTGGTCTCAGAAAACTTTTCCCACAACCGTaGGGACCAGTTATCAAGAGA | + |
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Preference number: 5 (lower is better) Translates to: TNSHHILPLRQRVFGLRKLFPQP*GPVIKR Trigger: TCTCTTGATAACTGGTCCCAACGGTTGTGGGAAAAG...TTTTCTGAGACCAAATACCCTCTGTCTTAGAGGGAGAATGTGATGTGAATTTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069511.8 |
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| CDS-3UTR CAA 90 bp | GTGATGTCGTTCTTGATTGATTTTAAGTCAAAGACTGATGACCATTGCATTTGCAGTCTCTGTTGCATTTaGGGAATTCCAGCGAGCTGC | + |
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Preference number: 5 (lower is better) Translates to: VMSFLIDFKSKTDDHCICSLCCI*GIPASC Trigger: GCAGCTCGCTGGAATTCCCAAAATGCAACAGAGACT...GCAAATGCAATGGTCATCAGTCTTTGACTTAAAATCAATCAAGAACGACATCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069511.8 |
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| CDS-3UTR CAA 90 bp | GTGATGTCGTTCTTGATTGATTTTAAGTCAAAGACTGATGACCATTGCATTTGCAAGGCCAATGCCAGTTaGCATTCCAGGTACCTGATA | + |
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Preference number: 5 (lower is better) Translates to: VMSFLIDFKSKTDDHCICKANAS*HSRYLI Trigger: TATCAGGTACCTGGAATGCAAACTGGCATTGGCCTT...GCAAATGCAATGGTCATCAGTCTTTGACTTAAAATCAATCAAGAACGACATCAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069511.8 |
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| CDS TCA 90 bp | GTTAGAATGACATCTAAAATAGGTTTGGTAAGGTTGGAATACAGGTaGGCCACAGATTGCGAGAACATCATAATGTCTTCGGTAAGAGAC | + |
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Preference number: 5 (lower is better) Translates to: VRMTSKIGLVRLEYR*ATDCENIIMSSVRD Trigger: GTCTCTTACCGAAGACATTATGATGTTCTCGCAATCTGTGGCTCACCTGTATTCCAACCTTACCAAACCTATTTTAGATGTCATTCTAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069511.8 |
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| CDS-3UTR CAA 90 bp | CAAAGTAATCAAGCTCCACAAATGTACGCCTTTTCTAAGGAAAAGATAAGTAGTCAGGTGAGCCACAGATaGCGAGAACATCATAATGTC | + |
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Preference number: 5 (lower is better) Translates to: QSNQAPQMYAFSKEKISSQVSHR*REHHNV Trigger: GACATTATGATGTTCTCGCAATCTGTGGCTCACCTG...ACTACTTATCTTTTCCTTAGAAAAGGCGTACATTTGTGGAGCTTGATTACTTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069511.8 |
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| CDS-3UTR CAA 90 bp | ATTTCTAGACATTTACCTGGCCCACATAATTTTATTTTTCCCGAGACAGGGTTTTTCGTTGAGTCTCTGTaGCATTTTGGGAATTCCAGC | + |
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Preference number: 5 (lower is better) Translates to: ISRHLPGPHNFIFPETGFFVESL*HFGNSS Trigger: GCTGGAATTCCCAAAATGCAACAGAGACTCAACGAA...AAACCCTGTCTCGGGAAAAATAAAATTATGTGGGCCAGGTAAATGTCTAGAAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000069511.8 |
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| CDS-3UTR CAA 90 bp | GTGATGTCGTTCTTGATTGATTTTAAGTCAAAGACTGATGACCATTGCATTTGCAGCCACTTGATTAATTaGATGATGAAAGTCCGAGGC | + |
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Preference number: 5 (lower is better) Translates to: VMSFLIDFKSKTDDHCICSHLIN*MMKVRG Trigger: GCCTCGGACTTTCATCATCAAATTAATCAAGTGGCT...GCAAATGCAATGGTCATCAGTCTTTGACTTAAAATCAATCAAGAACGACATCAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069511.8 |
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| CDS CCA 72 bp | GAAGGCCTCTGTCCGATCGCTAACCATAGCCTGCTTTaGACCATCCTCCAGATCACCATCTGCAAAGCCCGT | + |
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Preference number: 6 (lower is better) Translates to: EGLCPIANHSLL*TILQITICKAR Trigger: ACGGGCTTTGCAGATGGTGATCTGGAGGATGGTCCAAAGCAGGCTATGGTTAGCGATCGGACAGAGGCCTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069511.8 |
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| CDS TCA 72 bp | CCTTCCTGTGGCCAGGCTGCTTTAAACGCTTGCCAATaGTGGGATAGAGGGTTTTCAGAGCATATGCCGCAG | + |
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Preference number: 6 (lower is better) Translates to: PSCGQAALNACQ*WDRGFSEHMPQ Trigger: CTGCGGCATATGCTCTGAAAACCCTCTATCCCATCATTGGCAAGCGTTTAAAGCAGCCTGGCCACAGGAAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069511.8 |
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| CDS TCA 72 bp | CTCCTTCATACACAGGCCACAGCCCGCTTAAGATTCTaGAGAGAGAGCTTTTCCCACAACCGTTGGGACCAG | + |
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Preference number: 6 (lower is better) Translates to: LLHTQATARLRF*RESFSHNRWDQ Trigger: CTGGTCCCAACGGTTGTGGGAAAAGCTCTCTCTTCAGAATCTTAAGCGGGCTGTGGCCTGTGTATGAAGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069511.8 |
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| CDS GCA 72 bp | CATAGCCTGCTTTGGACCATCCTCCAGATCACCATCTaGAAAGCCCGTTGCAGTGATAATGGGTATAGCCAC | + |
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Preference number: 6 (lower is better) Translates to: HSLLWTILQITI*KARCSDNGYSH Trigger: GTGGCTATACCCATTATCACTGCAACGGGCTTTGCAGATGGTGATCTGGAGGATGGTCCAAAGCAGGCTATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069511.8 |
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| CDS CAA 72 bp | TTCCTGTGGGCTTCTTCAGCCACCAGCGAACCAAATTaGGGCGAGCAAGCTTTCAGTACTTTAGCAGTGGCA | + |
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Preference number: 6 (lower is better) Translates to: FLWASSATSEPN*GEQAFSTLAVA Trigger: TGCCACTGCTAAAGTACTGAAAGCTTGCTCGCCCAAATTTGGTTCGCTGGTGGCTGAAGAAGCCCACAGGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069511.8 |
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| CDS TCA 72 bp | GTCCTCTGTAGAAGGCAATTTCTTCTACATTGGCTATaGTTCGGGAGTGGACATACCGCAGGTAGCCTTTCC | + |
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Preference number: 6 (lower is better) Translates to: VLCRRQFLLHWL*FGSGHTAGSLS Trigger: GGAAAGGCTACCTGCGGTATGTCCACTCCCGAATCATAGCCAATGTAGAAGAAATTGCCTTCTACAGAGGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069511.8 |
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| CDS TCA 72 bp | TTGGTCAGTGTAACCTTTCTCACGCATGTCATCCGCTaGGTCAGGGTAAATTACTTGATCCCGGAGACTTCC | + |
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Preference number: 6 (lower is better) Translates to: LVSVTFLTHVIR*VRVNYLIPETS Trigger: GGAAGTCTCCGGGATCAAGTAATTTACCCTGACTCAGCGGATGACATGCGTGAGAAAGGTTACACTGACCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069511.8 |
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| CDS GCA 72 bp | GATGATCTCCGTGCAATGCAGTATTTCTCTGTTCTCTaGAGGCGAGTAAGCTTCTGCTTTTGCCTTCCTGTG | + |
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Preference number: 6 (lower is better) Translates to: DDLRAMQYFSVL*RRVSFCFCLPV Trigger: CACAGGAAGGCAAAAGCAGAAGCTTACTCGCCTGCAGAGAACAGAGAAATACTGCATTGCACGGAGATCATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069511.8 |
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| CDS GCA 72 bp | TTTGAACTATGTGGTAGAGGTGCACGCTGTGCAGGATaGGTTCTAGGTCTTGGTCAGTGTAACCTTTCTCAC | + |
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Preference number: 6 (lower is better) Translates to: FELCGRGARCAG*VLGLGQCNLSH Trigger: GTGAGAAAGGTTACACTGACCAAGACCTAGAACGCATCCTGCACAGCGTGCACCTCTACCACATAGTTCAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069511.8 |
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| CDS CAA 90 bp | CACAGCCCGCTTAAGATTCTGAAGAGAGAGCTTTTCCCACAACCGTaGGGACCAGTTATCAAGAGATGCATCCCTTCTTCCACTTTGAAG | + |
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Preference number: 6 (lower is better) Translates to: HSPLKILKRELFPQP*GPVIKRCIPSSTLK Trigger: CTTCAAAGTGGAAGAAGGGATGCATCTCTTGATAACTGGTCCCAACGGTTGTGGGAAAAGCTCTCTCTTCAGAATCTTAAGCGGGCTGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069511.8 |
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| CDS CAA 90 bp | ACTTCCAAGAGACATGTATGGCCTCTGTGGAATATAGAACATATGTaGGGGAGGCGGTTTATAAAGGACTCCTTCATACACAGGCCACAG | + |
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Preference number: 6 (lower is better) Translates to: TSKRHVWPLWNIEHM*GRRFIKDSFIHRPQ Trigger: CTGTGGCCTGTGTATGAAGGAGTCCTTTATAAACCGCCTCCCCAACATATGTTCTATATTCCACAGAGGCCATACATGTCTCTTGGAAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069511.8 |
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| CDS GCA 72 bp | CTTTTCCCACAACCGTTGGGACCAGTTATCAAGAGATaGATCCCTTCTTCCACTTTGAAGTTTAGCCTGGAA | + |
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Preference number: 6 (lower is better) Translates to: LFPQPLGPVIKR*IPSSTLKFSLE Trigger: TTCCAGGCTAAACTTCAAAGTGGAAGAAGGGATGCATCTCTTGATAACTGGTCCCAACGGTTGTGGGAAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069511.8 |
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| CDS CCA 72 bp | GATTGCGAGAACATCATAATGTCTTCGGTAAGAGACTaGTCAGGGTTTGCCAGCCTCCCATCCATATTTATC | + |
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Preference number: 6 (lower is better) Translates to: DCENIIMSSVRD*SGFASLPSIFI Trigger: GATAAATATGGATGGGAGGCTGGCAAACCCTGACCAGTCTCTTACCGAAGACATTATGATGTTCTCGCAATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069511.8 |
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| CDS CAA 72 bp | CTTAAGATTCTGAAGAGAGAGCTTTTCCCACAACCGTaGGGACCAGTTATCAAGAGATGCATCCCTTCTTCC | + |
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Preference number: 6 (lower is better) Translates to: LKILKRELFPQP*GPVIKRCIPSS Trigger: GGAAGAAGGGATGCATCTCTTGATAACTGGTCCCAACGGTTGTGGGAAAAGCTCTCTCTTCAGAATCTTAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069511.8 |
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| CDS CAA 72 bp | AGGTTTGGTAAGGTTGGAATACAGGTGAGCCACAGATaGCGAGAACATCATAATGTCTTCGGTAAGAGACTG | + |
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Preference number: 6 (lower is better) Translates to: RFGKVGIQVSHR*REHHNVFGKRL Trigger: CAGTCTCTTACCGAAGACATTATGATGTTCTCGCAATCTGTGGCTCACCTGTATTCCAACCTTACCAAACCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069511.8 |
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| CDS CAA 72 bp | AGAATTTTGCATAGTTCGTTGAGTCTCTGTTGCATTTaGGGAATTCCAGCGAGCTGCGACTCCAACTTTTGC | + |
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Preference number: 6 (lower is better) Translates to: RILHSSLSLCCI*GIPASCDSNFC Trigger: GCAAAAGTTGGAGTCGCAGCTCGCTGGAATTCCCAAAATGCAACAGAGACTCAACGAACTATGCAAAATTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069511.8 |
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| CDS CAA 72 bp | AGACATGTATGGCCTCTGTGGAATATAGAACATATGTaGGGGAGGCGGTTTATAAAGGACTCCTTCATACAC | + |
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Preference number: 6 (lower is better) Translates to: RHVWPLWNIEHM*GRRFIKDSFIH Trigger: GTGTATGAAGGAGTCCTTTATAAACCGCCTCCCCAACATATGTTCTATATTCCACAGAGGCCATACATGTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069511.8 |
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| CDS CAA 72 bp | GTAGCAGGGATAGCAATCATAAGCCACTTGATTAATTaGATGATGAAAGTCCGAGGCTTCTTTTCCACGATG | + |
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Preference number: 6 (lower is better) Translates to: VAGIAIISHLIN*MMKVRGFFSTM Trigger: CATCGTGGAAAAGAAGCCTCGGACTTTCATCATCAAATTAATCAAGTGGCTTATGATTGCTATCCCTGCTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069511.8 |
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| CDS CAA 90 bp | TTGACAAAGGTAGCAGGGATAGCAATCATAAGCCACTTGATTAATTaGATGATGAAAGTCCGAGGCTTCTTTTCCACGATGCTTTTCACG | + |
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Preference number: 6 (lower is better) Translates to: LTKVAGIAIISHLIN*MMKVRGFFSTMLFT Trigger: CGTGAAAAGCATCGTGGAAAAGAAGCCTCGGACTTTCATCATCAAATTAATCAAGTGGCTTATGATTGCTATCCCTGCTACCTTTGTCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069511.8 |
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| CDS TCA 72 bp | ACATCTAAAATAGGTTTGGTAAGGTTGGAATACAGGTaGGCCACAGATTGCGAGAACATCATAATGTCTTCG | + |
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Preference number: 6 (lower is better) Translates to: TSKIGLVRLEYR*ATDCENIIMSS Trigger: CGAAGACATTATGATGTTCTCGCAATCTGTGGCTCACCTGTATTCCAACCTTACCAAACCTATTTTAGATGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069511.8 |
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| CDS CAA 72 bp | TCCCATCCATATTTATCACCTTATAATAAGTCTGATTaGCGAAATAGGTCTCATAGGCATGGTCTACTAAGC | + |
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Preference number: 6 (lower is better) Translates to: SHPYLSPYNKSD*RNRSHRHGLLS Trigger: GCTTAGTAGACCATGCCTATGAGACCTATTTCGCAAATCAGACTTATTATAAGGTGATAAATATGGATGGGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069511.8 |
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