Pregenerated sensors for ABCD1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031378Ensembl transcript IDs: ENSMUST00000002084.14, ENSMUST00000114461.3
Found 180 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ATATCTACCTGTCCCAGAGTGGGGTCTTCAGGGAATGCAGGTAATTaGCTAGGAGGCTTGGGAGGGGTAAGGCATGCAGGGCAATGGGGG | + |
|
Preference number: 1 (lower is better) Translates to: ISTCPRVGSSGNAGN*LGGLGGVRHAGQWG Trigger: CCCCCATTGCCCTGCATGCCTTACCCCTCCCAAGCCTCCTAGCCAATTACCTGCATTCCCTGAAGACCCCACTCTGGGACAGGTAGATAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002084.14 |
||
| 3UTR TCA 90 bp | CTAGCAAAGCTAAGTGAGCCAAGGGCTAGGGTTTACAGATGCAGGTaGCCAGATAATCTGGGAAGTGTACCTTGTCCCCAGCTACTTGGC | + |
|
Preference number: 1 (lower is better) Translates to: LAKLSEPRARVYRCR*PDNLGSVPCPQLLG Trigger: GCCAAGTAGCTGGGGACAAGGTACACTTCCCAGATTATCTGGTCACCTGCATCTGTAAACCCTAGCCCTTGGCTCACTTAGCTTTGCTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114461.3 |
||
| 3UTR CCA 90 bp | TTGGTTTCAAGTACCCAGCCCAGAGTTCAGGGAAGCCAGGTGGGATaGATGAATCATCAGACTAGGAGCACTTGGGTAACCCTTGGACAA | + |
|
Preference number: 1 (lower is better) Translates to: LVSSTQPRVQGSQVG*MNHQTRSTWVTLGQ Trigger: TTGTCCAAGGGTTACCCAAGTGCTCCTAGTCTGATGATTCATCCATCCCACCTGGCTTCCCTGAACTCTGGGCTGGGTACTTGAAACCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114461.3 |
||
| 3UTR TCA 90 bp | GCTGGTCACACAAGGGGATGGCAACAAAGGGATGGATCAAAACAATaGCAAGGATTTGGGTTTCGGCAGGGATGTAACCCACAACTACCA | + |
|
Preference number: 1 (lower is better) Translates to: AGHTRGWQQRDGSKQ*QGFGFRQGCNPQLP Trigger: TGGTAGTTGTGGGTTACATCCCTGCCGAAACCCAAATCCTTGTCATTGTTTTGATCCATCCCTTTGTTGCCATCCCCTTGTGTGACCAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002084.14 |
||
| 3UTR CCA 90 bp | TTCAGGTCTCATGGTCAGAGATATGTTGGTCTTTCAGCTTCACCTTaGCCTATCTTCCACGTGGCTGGGGACAATGTTGCTGCTAGCAAA | + |
|
Preference number: 1 (lower is better) Translates to: FRSHGQRYVGLSASP*PIFHVAGDNVAASK Trigger: TTTGCTAGCAGCAACATTGTCCCCAGCCACGTGGAAGATAGGCCAAGGTGAAGCTGAAAGACCAACATATCTCTGACCATGAGACCTGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114461.3 |
||
| 3UTR CCA 90 bp | TCAGCACTTACACTATTGCTTCAGGTCTCATGGTCAGAGATATGTTaGTCTTTCAGCTTCACCTTGGCCTATCTTCCACGTGGCTGGGGA | + |
|
Preference number: 1 (lower is better) Translates to: SALTLLLQVSWSEIC*SFSFTLAYLPRGWG Trigger: TCCCCAGCCACGTGGAAGATAGGCCAAGGTGAAGCTGAAAGACCAACATATCTCTGACCATGAGACCTGAAGCAATAGTGTAAGTGCTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114461.3 |
||
| 3UTR CCA 90 bp | TTCCCAAGTGCTGGGATTAAAGGTATGTGTCACAACAGTAAGCAGTaGATACTTCTTAAGGTCACTCACTCCACTCTCCAATTTATCTTT | + |
|
Preference number: 1 (lower is better) Translates to: FPSAGIKGMCHNSKQ*ILLKVTHSTLQFIF Trigger: AAAGATAAATTGGAGAGTGGAGTGAGTGACCTTAAGAAGTATCCACTGCTTACTGTTGTGACACATACCTTTAATCCCAGCACTTGGGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114461.3 |
||
| 3UTR-3UTR GCA 90 bp | GAGGAGTGGGAGGGCCAGGGCTATATTCTCTTCATGGCTCAGGAGGAACTCTGTGGGAGGGGTAAGGCATaGAGGGCAATGGGGGAGGGG | + |
|
Preference number: 2 (lower is better) Translates to: EEWEGQGYILFMAQEELCGRGKA*RAMGEG Trigger: CCCCTCCCCCATTGCCCTGCATGCCTTACCCCTCCC...ACAGAGTTCCTCCTGAGCCATGAAGAGAATATAGCCCTGGCCCTCCCACTCCTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002084.14 |
||
| 3UTR-3UTR CCA 90 bp | GGAAGGGCACACTTTGGGCCCTGTCTAATCCTGGGCCCCATTAGGCTGTTTTCAAGGCATGCAGGGCAATaGGGGAGGGGAGGAGCTTCC | + |
|
Preference number: 2 (lower is better) Translates to: GRAHFGPCLILGPIRLFSRHAGQ*GRGGAS Trigger: GGAAGCTCCTCCCCTCCCCCATTGCCCTGCATGCCT...TGAAAACAGCCTAATGGGGCCCAGGATTAGACAGGGCCCAAAGTGTGCCCTTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000002084.14 |
||
| 3UTR CAA 90 bp | TATAGGCTGGTGAAGGGCCAGGTTTGGCACCAGAGACTGGGTAGATaGAAGGGACCACCCAGTCACCTCCTGTGCTGGCAGGGTACTCAT | + |
|
Preference number: 2 (lower is better) Translates to: YRLVKGQVWHQRLGR*KGPPSHLLCWQGTH Trigger: ATGAGTACCCTGCCAGCACAGGAGGTGACTGGGTGGTCCCTTCAATCTACCCAGTCTCTGGTGCCAAACCTGGCCCTTCACCAGCCTATA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002084.14 |
||
| 3UTR-3UTR GCA 90 bp | TGGGTAACCATGGGGAAGGGCACACTTTGGGCCCTGTCTAATCCTGGGCCCCATCACAACTACCAGGGTTaGCACACATTCTGGCTGCTG | + |
|
Preference number: 2 (lower is better) Translates to: WVTMGKGTLWALSNPGPHHNYQG*HTFWLL Trigger: CAGCAGCCAGAATGTGTGGCAACCCTGGTAGTTGTG...ATGGGGCCCAGGATTAGACAGGGCCCAAAGTGTGCCCTTCCCCATGGTTACCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002084.14 |
||
| 3UTR-3UTR CCA 90 bp | GAAGGGACCACCCAGTCACCTCCTGTGCTGGCAGGGTACTCATGTTGGCAATTTGGGAATGCAGGTAATTaGCTAGGAGGCTTGGGAGGG | + |
|
Preference number: 2 (lower is better) Translates to: EGTTQSPPVLAGYSCWQFGNAGN*LGGLGG Trigger: CCCTCCCAAGCCTCCTAGCCAATTACCTGCATTCCC...AAATTGCCAACATGAGTACCCTGCCAGCACAGGAGGTGACTGGGTGGTCCCTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002084.14 |
||
| 3UTR-3UTR CCA 90 bp | GCACACAATGGCAGTAGGGTGTGTGTGTGGGGGCGTCTCCCTCTTGGTGAGGGCGCTATATTCTCTTCATaGCTCAGGAGGAACTCTGTC | + |
|
Preference number: 2 (lower is better) Translates to: AHNGSRVCVWGRLPLGEGAIFSS*LRRNSV Trigger: GACAGAGTTCCTCCTGAGCCATGAAGAGAATATAGC...GCCCTCACCAAGAGGGAGACGCCCCCACACACACACCCTACTGCCATTGTGTGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002084.14 |
||
| 3UTR-3UTR TCA 90 bp | GGTATAGAGTCAGGACTGGGGACTTCCAAACCCTCCATCCCTCCCCAGGGAAAAGAGCAGAACCCAGAGTaGAGGTGGAATGCAGTGTGT | + |
|
Preference number: 2 (lower is better) Translates to: GIESGLGTSKPSIPPQGKEQNPE*RWNAVC Trigger: ACACACTGCATTCCACCTTCACTCTGGGTTCTGCTC...TTTTCCCTGGGGAGGGATGGAGGGTTTGGAAGTCCCCAGTCCTGACTCTATACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000002084.14 |
||
| 3UTR-3UTR GCA 90 bp | TGGAGGAGTGGGAGGGCCAGGGCTATATTCTCTTCATGGCTCAGGAGGAACTCTAAGGGAGGCAGCTCCTaGTTACTTCCTATGGCTCAG | + |
|
Preference number: 2 (lower is better) Translates to: WRSGRARAIFSSWLRRNSKGGSS*LLPMAQ Trigger: CTGAGCCATAGGAAGTAAGCAGGAGCTGCCTCCCTT...AGAGTTCCTCCTGAGCCATGAAGAGAATATAGCCCTGGCCCTCCCACTCCTCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002084.14 |
||
| 3UTR-3UTR CCA 90 bp | CCTTCTTGGGTAACCATGGGGAAGGGCACACTTTGGGCCCTGTCTAATCCTGGGCCTGCTTACTTCCTATaGCTCAGCCATACTGGTATA | + |
|
Preference number: 2 (lower is better) Translates to: PSWVTMGKGTLWALSNPGPAYFL*LSHTGI Trigger: TATACCAGTATGGCTGAGCCATAGGAAGTAAGCAGG...CCCAGGATTAGACAGGGCCCAAAGTGTGCCCTTCCCCATGGTTACCCAAGAAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002084.14 |
||
| 3UTR CAA 90 bp | TTTCAGCTTCACCTTGGCCTATCTTCCACGTGGCTGGGGACAATGTaGCTGCTAGCAAAGCTAAGTGAGCCAAGGGCTAGGGTTTACAGA | + |
|
Preference number: 2 (lower is better) Translates to: FQLHLGLSSTWLGTM*LLAKLSEPRARVYR Trigger: TCTGTAAACCCTAGCCCTTGGCTCACTTAGCTTTGCTAGCAGCAACATTGTCCCCAGCCACGTGGAAGATAGGCCAAGGTGAAGCTGAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114461.3 |
||
| 3UTR-3UTR CCA 90 bp | CCTTCTTGGGTAACCATGGGGAAGGGCACACTTTGGGCCCTGTCTAATCCTGGGATGGCAACAAAGGGATaGATCAAAACAATGACAAGG | + |
|
Preference number: 2 (lower is better) Translates to: PSWVTMGKGTLWALSNPGMATKG*IKTMTR Trigger: CCTTGTCATTGTTTTGATCCATCCCTTTGTTGCCAT...CCCAGGATTAGACAGGGCCCAAAGTGTGCCCTTCCCCATGGTTACCCAAGAAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002084.14 |
||
| 3UTR CAA 90 bp | ATCAGCACTTACACTATTGCTTCAGGTCTCATGGTCAGAGATATGTaGGTCTTTCAGCTTCACCTTGGCCTATCTTCCACGTGGCTGGGG | + |
|
Preference number: 2 (lower is better) Translates to: ISTYTIASGLMVRDM*VFQLHLGLSSTWLG Trigger: CCCCAGCCACGTGGAAGATAGGCCAAGGTGAAGCTGAAAGACCAACATATCTCTGACCATGAGACCTGAAGCAATAGTGTAAGTGCTGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114461.3 |
||
| 3UTR-3UTR CCA 90 bp | ACTCCACTCTCCAATTTATCTTTGGTTTCAAGTACCCAGCCCAGAGTTCAGGGACAGACTAGGAGCACTTaGGTAACCCTTGGACAACCC | + |
|
Preference number: 2 (lower is better) Translates to: TPLSNLSLVSSTQPRVQGQTRST*VTLGQP Trigger: GGGTTGTCCAAGGGTTACCCAAGTGCTCCTAGTCTG...TCCCTGAACTCTGGGCTGGGTACTTGAAACCAAAGATAAATTGGAGAGTGGAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114461.3 |
||
| 3UTR-3UTR CCA 90 bp | AAACTGGCCTCAAACTCACAGAGATTTACCCACCTCTGCTTCCCAAGTGCTGGGTGGTCAGAGATATGTTaGTCTTTCAGCTTCACCTTG | + |
|
Preference number: 2 (lower is better) Translates to: KLASNSQRFTHLCFPSAGWSEIC*SFSFTL Trigger: CAAGGTGAAGCTGAAAGACCAACATATCTCTGACCA...CCCAGCACTTGGGAAGCAGAGGTGGGTAAATCTCTGTGAGTTTGAGGCCAGTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114461.3 |
||
| 3UTR-3UTR TCA 90 bp | ACTATGCAGACCAAACTGGCCTCAAACTCACAGAGATTTACCCACCTCTGCTTCGTTTACAGATGCAGGTaGCCAGATAATCTGGGAAGT | + |
|
Preference number: 2 (lower is better) Translates to: TMQTKLASNSQRFTHLCFVYRCR*PDNLGS Trigger: ACTTCCCAGATTATCTGGTCACCTGCATCTGTAAAC...GAAGCAGAGGTGGGTAAATCTCTGTGAGTTTGAGGCCAGTTTGGTCTGCATAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114461.3 |
||
| 3UTR-3UTR CCA 90 bp | AGCCCTGGCTGTCTTGGAACTTACTATGCAGACCAAACTGGCCTCAAACTCACACACAACAGTAAGCAGTaGATACTTCTTAAGGTCACT | + |
|
Preference number: 2 (lower is better) Translates to: SPGCLGTYYADQTGLKLTHNSKQ*ILLKVT Trigger: AGTGACCTTAAGAAGTATCCACTGCTTACTGTTGTG...TGTGAGTTTGAGGCCAGTTTGGTCTGCATAGTAAGTTCCAAGACAGCCAGGGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114461.3 |
||
| 3UTR CCA 72 bp | CCAGGAAAGGCACACAATGGCAGTAGGGTGTGTGTGTaGGGGCGTCTCCCTCTTGGTGAGGGCTGGTTTAGC | + |
|
Preference number: 3 (lower is better) Translates to: PGKAHNGSRVCV*GRLPLGEGWFS Trigger: GCTAAACCAGCCCTCACCAAGAGGGAGACGCCCCCACACACACACCCTACTGCCATTGTGTGCCTTTCCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002084.14 |
||
| 3UTR CCA 72 bp | TGTCCCAGAGTGGGGTCTTCAGGGAATGCAGGTAATTaGCTAGGAGGCTTGGGAGGGGTAAGGCATGCAGGG | + |
|
Preference number: 3 (lower is better) Translates to: CPRVGSSGNAGN*LGGLGGVRHAG Trigger: CCCTGCATGCCTTACCCCTCCCAAGCCTCCTAGCCAATTACCTGCATTCCCTGAAGACCCCACTCTGGGACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002084.14 |
||
| 3UTR CCA 72 bp | GGCAACTGGCAGTATAGGCTGGTGAAGGGCCAGGTTTaGCACCAGAGACTGGGTAGATTGAAGGGACCACCC | + |
|
Preference number: 3 (lower is better) Translates to: GNWQYRLVKGQV*HQRLGRLKGPP Trigger: GGGTGGTCCCTTCAATCTACCCAGTCTCTGGTGCCAAACCTGGCCCTTCACCAGCCTATACTGCCAGTTGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002084.14 |
||
| 3UTR-3UTR CAA 90 bp | TATCCTGTGGGACAGGGGCATTGGCTGGTCACACAAGGGGATGGCAACAAAGGGAATTGGCTAGGAGGCTaGGGAGGGGTAAGGCATGCA | + |
|
Preference number: 3 (lower is better) Translates to: YPVGQGHWLVTQGDGNKGNWLGG*GGVRHA Trigger: TGCATGCCTTACCCCTCCCAAGCCTCCTAGCCAATT...CCCTTTGTTGCCATCCCCTTGTGTGACCAGCCAATGCCCCTGTCCCACAGGATA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000002084.14 |
||
| 3UTR-3UTR CAA 90 bp | GGAGTGGGAGGGCCAGGGCTATATTCTCTTCATGGCTCAGGAGGAACTCTGTCCCCACAACTACCAGGGTaGCCACACATTCTGGCTGCT | + |
|
Preference number: 3 (lower is better) Translates to: GVGGPGLYSLHGSGGTLSPQLPG*PHILAA Trigger: AGCAGCCAGAATGTGTGGCAACCCTGGTAGTTGTGG...GGACAGAGTTCCTCCTGAGCCATGAAGAGAATATAGCCCTGGCCCTCCCACTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002084.14 |
||
| 3UTR GCA 72 bp | GGTTTCGGCAGGGATGTAACCCACAACTACCAGGGTTaGCACACATTCTGGCTGCTGGCAGTAAGGGAGGCA | + |
|
Preference number: 3 (lower is better) Translates to: GFGRDVTHNYQG*HTFWLLAVREA Trigger: TGCCTCCCTTACTGCCAGCAGCCAGAATGTGTGGCAACCCTGGTAGTTGTGGGTTACATCCCTGCCGAAACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002084.14 |
||
| 3UTR CCA 72 bp | CTGGCAGTAAGGGAGGCAGCTCCTGCTTACTTCCTATaGCTCAGCCATACTGGTATAGAGTCAGGACTGGGG | + |
|
Preference number: 3 (lower is better) Translates to: LAVREAAPAYFL*LSHTGIESGLG Trigger: CCCCAGTCCTGACTCTATACCAGTATGGCTGAGCCATAGGAAGTAAGCAGGAGCTGCCTCCCTTACTGCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002084.14 |
||
| 3UTR CCA 72 bp | ATTCTCTTCATGGCTCAGGAGGAACTCTGTCCTTCTTaGGTAACCATGGGGAAGGGCACACTTTGGGCCCTG | + |
|
Preference number: 3 (lower is better) Translates to: ILFMAQEELCPS*VTMGKGTLWAL Trigger: CAGGGCCCAAAGTGTGCCCTTCCCCATGGTTACCCAAGAAGGACAGAGTTCCTCCTGAGCCATGAAGAGAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002084.14 |
||
| 3UTR CCA 72 bp | AGTACCCAGCCCAGAGTTCAGGGAAGCCAGGTGGGATaGATGAATCATCAGACTAGGAGCACTTGGGTAACC | + |
|
Preference number: 3 (lower is better) Translates to: STQPRVQGSQVG*MNHQTRSTWVT Trigger: GGTTACCCAAGTGCTCCTAGTCTGATGATTCATCCATCCCACCTGGCTTCCCTGAACTCTGGGCTGGGTACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114461.3 |
||
| 3UTR-3UTR CAA 90 bp | CACAGAGATTTACCCACCTCTGCTTCCCAAGTGCTGGGATTAAAGGTATGTGTCCTTGTCCCCAGCTACTaGGCTCAGATTGGTCAGCAC | + |
|
Preference number: 3 (lower is better) Translates to: HRDLPTSASQVLGLKVCVLVPSY*AQIGQH Trigger: GTGCTGACCAATCTGAGCCAAGTAGCTGGGGACAAG...GACACATACCTTTAATCCCAGCACTTGGGAAGCAGAGGTGGGTAAATCTCTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114461.3 |
||
| 3UTR TCA 72 bp | CTGAACAGGGCAGAGTTCCTGGAGCAGAACCCAGAGTaGAGGTGGAATGCAGTGTGTCCCCATTCATATCTA | + |
|
Preference number: 3 (lower is better) Translates to: LNRAEFLEQNPE*RWNAVCPHSYL Trigger: TAGATATGAATGGGGACACACTGCATTCCACCTTCACTCTGGGTTCTGCTCCAGGAACTCTGCCCTGTTCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002084.14 |
||
| 3UTR TCA 72 bp | CTAAGTGAGCCAAGGGCTAGGGTTTACAGATGCAGGTaGCCAGATAATCTGGGAAGTGTACCTTGTCCCCAG | + |
|
Preference number: 3 (lower is better) Translates to: LSEPRARVYRCR*PDNLGSVPCPQ Trigger: CTGGGGACAAGGTACACTTCCCAGATTATCTGGTCACCTGCATCTGTAAACCCTAGCCCTTGGCTCACTTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114461.3 |
||
| 3UTR GCA 72 bp | AGAGTTCCTGGAGCAGAACCCAGAGTGAAGGTGGAATaGAGTGTGTCCCCATTCATATCTACCTGTCCCAGA | + |
|
Preference number: 3 (lower is better) Translates to: RVPGAEPRVKVE*SVSPFISTCPR Trigger: TCTGGGACAGGTAGATATGAATGGGGACACACTGCATTCCACCTTCACTCTGGGTTCTGCTCCAGGAACTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002084.14 |
||
| 3UTR-3UTR CAA 90 bp | CACAGAGATTTACCCACCTCTGCTTCCCAAGTGCTGGGATTAAAGGTATGTGTCCTCTCCAATTTATCTTaGGTTTCAAGTACCCAGCCC | + |
|
Preference number: 3 (lower is better) Translates to: HRDLPTSASQVLGLKVCVLSNLS*VSSTQP Trigger: GGGCTGGGTACTTGAAACCAAAGATAAATTGGAGAG...GACACATACCTTTAATCCCAGCACTTGGGAAGCAGAGGTGGGTAAATCTCTGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114461.3 |
||
| 3UTR TCA 72 bp | ACAAGGGGATGGCAACAAAGGGATGGATCAAAACAATaGCAAGGATTTGGGTTTCGGCAGGGATGTAACCCA | + |
|
Preference number: 3 (lower is better) Translates to: TRGWQQRDGSKQ*QGFGFRQGCNP Trigger: TGGGTTACATCCCTGCCGAAACCCAAATCCTTGTCATTGTTTTGATCCATCCCTTTGTTGCCATCCCCTTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002084.14 |
||
| 3UTR CCA 72 bp | ACACTATTGCTTCAGGTCTCATGGTCAGAGATATGTTaGTCTTTCAGCTTCACCTTGGCCTATCTTCCACGT | + |
|
Preference number: 3 (lower is better) Translates to: TLLLQVSWSEIC*SFSFTLAYLPR Trigger: ACGTGGAAGATAGGCCAAGGTGAAGCTGAAAGACCAACATATCTCTGACCATGAGACCTGAAGCAATAGTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114461.3 |
||
| 3UTR CCA 72 bp | GCTGGGATTAAAGGTATGTGTCACAACAGTAAGCAGTaGATACTTCTTAAGGTCACTCACTCCACTCTCCAA | + |
|
Preference number: 3 (lower is better) Translates to: AGIKGMCHNSKQ*ILLKVTHSTLQ Trigger: TTGGAGAGTGGAGTGAGTGACCTTAAGAAGTATCCACTGCTTACTGTTGTGACACATACCTTTAATCCCAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114461.3 |
||
| 3UTR-3UTR CAA 90 bp | AACTTACTATGCAGACCAAACTGGCCTCAAACTCACAGAGATTTACCCACCTCTATGGTCAGAGATATGTaGGTCTTTCAGCTTCACCTT | + |
|
Preference number: 3 (lower is better) Translates to: NLLCRPNWPQTHRDLPTSMVRDM*VFQLHL Trigger: AAGGTGAAGCTGAAAGACCAACATATCTCTGACCAT...AGAGGTGGGTAAATCTCTGTGAGTTTGAGGCCAGTTTGGTCTGCATAGTAAGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114461.3 |
||
| 3UTR CCA 72 bp | CTTTTATCAGCACTTACACTATTGCTTCAGGTCTCATaGTCAGAGATATGTTGGTCTTTCAGCTTCACCTTG | + |
|
Preference number: 3 (lower is better) Translates to: LLSALTLLLQVS*SEICWSFSFTL Trigger: CAAGGTGAAGCTGAAAGACCAACATATCTCTGACCATGAGACCTGAAGCAATAGTGTAAGTGCTGATAAAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114461.3 |
||
| CDS-3UTR TCA 90 bp | GGGGGAGGGGAGGAGCTTCCTTCATGTGATCCGAGAGCCTGGAGAAGGGTGGGACAGGCCAGCGATGGCTaGGGGCCAGGCTGTGCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: GGGEELPSCDPRAWRRVGQASDG*GPGCAS Trigger: GCTGGCACAGCCTGGCCCTCAGCCATCGCTGGCCTG...TCCCACCCTTCTCCAGGCTCTCGGATCACATGAAGGAAGCTCCTCCCCTCCCCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000002084.14 |
||
| CDS-3UTR GCA 90 bp | GGGAGGAGCTTCCTTCATGTGATCCGAGAGCCTGGAGAAGGGTGGGAGCTGGGGAGCCACTGCAGCAGTTaGCAGCTAAAGGCCCGCGGG | + |
|
Preference number: 4 (lower is better) Translates to: GRSFLHVIREPGEGWELGSHCSS*QLKARG Trigger: CCCGCGGGCCTTTAGCTGGCAACTGCTGCAGTGGCT...CCCCAGCTCCCACCCTTCTCCAGGCTCTCGGATCACATGAAGGAAGCTCCTCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002084.14 |
||
| CDS-3UTR TCA 90 bp | GGTATAGAGTCAGGACTGGGGACTTCCAAACCCTCCATCCCTCCCCAGGGAAAACAGCGTGGTCACCCGTaGGGGCCGGGGAGTGGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: GIESGLGTSKPSIPPQGKQRGHP*GPGSGE Trigger: CTCTCCACTCCCCGGCCCTCACGGGTGACCACGCTG...TTTTCCCTGGGGAGGGATGGAGGGTTTGGAAGTCCCCAGTCCTGACTCTATACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt. Matches the following 1 transcripts: ENSMUST00000002084.14 |
||
| CDS-3UTR TCA 90 bp | TGGGTAACCATGGGGAAGGGCACACTTTGGGCCCTGTCTAATCCTGGGCCCCATTCCCCAGCTGGCACCTaGGGACCTCTGGCAGGAGTC | + |
|
Preference number: 4 (lower is better) Translates to: WVTMGKGTLWALSNPGPHSPAGT*GPLAGV Trigger: GACTCCTGCCAGAGGTCCTCAGGTGCCAGCTGGGGA...ATGGGGCCCAGGATTAGACAGGGCCCAAAGTGTGCCCTTCCCCATGGTTACCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000002084.14 |
||
| CDS-3UTR TCA 90 bp | GGAAGGGCACACTTTGGGCCCTGTCTAATCCTGGGCCCCATTAGGCTGTTTTCAGCTCCAGAGGCCTCTTaGGTGGGCTCCCCAGCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: GRAHFGPCLILGPIRLFSAPEAS*VGSPAG Trigger: GCCAGCTGGGGAGCCCACTCAAGAGGCCTCTGGAGC...TGAAAACAGCCTAATGGGGCCCAGGATTAGACAGGGCCCAAAGTGTGCCCTTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000002084.14 |
||
| CDS-3UTR GCA 90 bp | GCACACAATGGCAGTAGGGTGTGTGTGTGGGGGCGTCTCCCTCTTGGTGAGGGCGGAATACCCGGTTCATaGCAGCCTTGGTTGCGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: AHNGSRVCVWGRLPLGEGGIPGS*QPWLRW Trigger: CCACCGCAACCAAGGCTGGCATGAACCGGGTATTCC...GCCCTCACCAAGAGGGAGACGCCCCCACACACACACCCTACTGCCATTGTGTGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002084.14 |
||
| CDS-3UTR GCA 90 bp | GGGGGAGGGGAGGAGCTTCCTTCATGTGATCCGAGAGCCTGGAGAAGGGTGGGAAGCGCCAAGAGCCGCTaGAGGAATACCCGGTTCATG | + |
|
Preference number: 4 (lower is better) Translates to: GGGEELPSCDPRAWRRVGSAKSR*RNTRFM Trigger: CATGAACCGGGTATTCCTGCAGCGGCTCTTGGCGCT...TCCCACCCTTCTCCAGGCTCTCGGATCACATGAAGGAAGCTCCTCCCCTCCCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002084.14 |
||
| CDS-3UTR GCA 90 bp | GGTTGCCACACATTCTGGCTGCTGGCAGTAAGGGAGGCAGCTCCTGCTTACTTCTGCAGCGGGCCAGTCTaGCGTCCAGGCGGGCAACAT | + |
|
Preference number: 4 (lower is better) Translates to: GCHTFWLLAVREAAPAYFCSGPV*RPGGQH Trigger: ATGTTGCCCGCCTGGACGGCAGACTGGCCCGCTGCA...GAAGTAAGCAGGAGCTGCCTCCCTTACTGCCAGCAGCCAGAATGTGTGGCAACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002084.14 |
||
| CDS-3UTR CCA 90 bp | GAGGAGTGGGAGGGCCAGGGCTATATTCTCTTCATGGCTCAGGAGGAACTCTGTCCACCAGGCCAGCGATaGCTGAGGGCCAGGCTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: EEWEGQGYILFMAQEELCPPGQR*LRARLC Trigger: GCACAGCCTGGCCCTCAGCCATCGCTGGCCTGGTGG...ACAGAGTTCCTCCTGAGCCATGAAGAGAATATAGCCCTGGCCCTCCCACTCCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002084.14 |
||
| CDS-3UTR TCA 90 bp | TTCAAGTACCCAGCCCAGAGTTCAGGGAAGCCAGGTGGGATGGATGAATCATCACAGGCCAGCGATGGCTaGGGGCCAGGCTGTGCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: FKYPAQSSGKPGGMDESSQASDG*GPGCAS Trigger: GCTGGCACAGCCTGGCCCTCAGCCATCGCTGGCCTG...TGATGATTCATCCATCCCACCTGGCTTCCCTGAACTCTGGGCTGGGTACTTGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114461.3 |
||
| CDS-3UTR TCA 90 bp | GGAGGAGTGGGAGGGCCAGGGCTATATTCTCTTCATGGCTCAGGAGGAACTCTGACCCCAGGCCCAGCCTaGGCCTCCTCTAGATCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: GGVGGPGLYSLHGSGGTLTPGPA*ASSRSP Trigger: AGGAGATCTAGAGGAGGCTCAGGCTGGGCCTGGGGT...CAGAGTTCCTCCTGAGCCATGAAGAGAATATAGCCCTGGCCCTCCCACTCCTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002084.14 |
||
| CDS-3UTR TCA 90 bp | GGTTGCCACACATTCTGGCTGCTGGCAGTAAGGGAGGCAGCTCCTGCTTACTTCCACCAGACTGTACCATaGCCCCAGGCCCAGCCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: GCHTFWLLAVREAAPAYFHQTVP*PQAQPE Trigger: CTCAGGCTGGGCCTGGGGTCATGGTACAGTCTGGTG...GAAGTAAGCAGGAGCTGCCTCCCTTACTGCCAGCAGCCAGAATGTGTGGCAACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002084.14 |
||
| CDS-3UTR GCA 90 bp | GCACACAATGGCAGTAGGGTGTGTGTGTGGGGGCGTCTCCCTCTTGGTGAGGGCGCGATGAGGAGCCACTaGAGCAGTTGCCAGCTAAAG | + |
|
Preference number: 4 (lower is better) Translates to: AHNGSRVCVWGRLPLGEGAMRSH*SSCQLK Trigger: CTTTAGCTGGCAACTGCTGCAGTGGCTCCTCATCGC...GCCCTCACCAAGAGGGAGACGCCCCCACACACACACCCTACTGCCATTGTGTGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002084.14 |
||
| CDS-3UTR GCA 90 bp | GGGGGAGGGGAGGAGCTTCCTTCATGTGATCCGAGAGCCTGGAGAAGGGTGGGACCTTTCGGTGGCATCTaGAGCAGCTGTGAGGAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: GGGEELPSCDPRAWRRVGPFGGI*SSCEEV Trigger: AACCTCCTCACAGCTGCTGCAGATGCCACCGAAAGG...TCCCACCCTTCTCCAGGCTCTCGGATCACATGAAGGAAGCTCCTCCCCTCCCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002084.14 |
||
| CDS-3UTR GCA 90 bp | GGGAGGAGCTTCCTTCATGTGATCCGAGAGCCTGGAGAAGGGTGGGAGCTGGGGGGAACAGAGAACTCTTaGCACAGCCATTGGGGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: GRSFLHVIREPGEGWELGGTENS*HSHWGL Trigger: CAGGCCCCAATGGCTGTGGCAAGAGTTCTCTGTTCC...CCCCAGCTCCCACCCTTCTCCAGGCTCTCGGATCACATGAAGGAAGCTCCTCCC 60% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000002084.14 |
||
| CDS-3UTR CCA 90 bp | AGTGGGAGGGCCAGGGCTATATTCTCTTCATGGCTCAGGAGGAACTCTGTCCTTCTGTGCGCTTCAGCGTaGTCACCCGTGAGGGCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: SGRARAIFSSWLRRNSVLLCASA*SPVRAG Trigger: CCCGGCCCTCACGGGTGACCACGCTGAAGCGCACAG...AAGGACAGAGTTCCTCCTGAGCCATGAAGAGAATATAGCCCTGGCCCTCCCACT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002084.14 |
||
| CDS-3UTR CCA 90 bp | ACCTGTCCCAGAGTGGGGTCTTCAGGGAATGCAGGTAATTGGCTAGGAGGCTTGAGTGGGCTCCCCAGCTaGCACCTGAGGACCTCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: TCPRVGSSGNAGNWLGGLSGLPS*HLRTSG Trigger: GCCAGAGGTCCTCAGGTGCCAGCTGGGGAGCCCACT...CAAGCCTCCTAGCCAATTACCTGCATTCCCTGAAGACCCCACTCTGGGACAGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002084.14 |
||
| 3UTR CAA 72 bp | GGGTCTTCAGGGAATGCAGGTAATTGGCTAGGAGGCTaGGGAGGGGTAAGGCATGCAGGGCAATGGGGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: GSSGNAGNWLGG*GGVRHAGQWGR Trigger: CCTCCCCCATTGCCCTGCATGCCTTACCCCTCCCAAGCCTCCTAGCCAATTACCTGCATTCCCTGAAGACCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002084.14 |
||
| CDS-3UTR TCA 90 bp | GGAGTGGGAGGGCCAGGGCTATATTCTCTTCATGGCTCAGGAGGAACTCTGTCCGGGAGGGTCGATGGGTaGTGGAGAGCAGTGCGATAC | + |
|
Preference number: 4 (lower is better) Translates to: GVGGPGLYSLHGSGGTLSGRVDG*WRAVRY Trigger: GTATCGCACTGCTCTCCATCACCCATCGACCCTCCC...GGACAGAGTTCCTCCTGAGCCATGAAGAGAATATAGCCCTGGCCCTCCCACTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002084.14 |
||
| CDS-3UTR GCA 90 bp | GAGTGGGAGGGCCAGGGCTATATTCTCTTCATGGCTCAGGAGGAACTCTGTCCTCATGCCAGCCTTGGTTaGGGTGGCTCCAGAGGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: EWEGQGYILFMAQEELCPHASLG*GGSRGL Trigger: GAGGCCTCTGGAGCCACCGCAACCAAGGCTGGCATG...AGGACAGAGTTCCTCCTGAGCCATGAAGAGAATATAGCCCTGGCCCTCCCACTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002084.14 |
||
| CDS-3UTR GCA 90 bp | TGGGTAACCATGGGGAAGGGCACACTTTGGGCCCTGTCTAATCCTGGGCCCCATCCTGTGATGAGCAGGTaGATGCCTTCCTCCACCCTG | + |
|
Preference number: 4 (lower is better) Translates to: WVTMGKGTLWALSNPGPHPVMSR*MPSSTL Trigger: CAGGGTGGAGGAAGGCATGCACCTGCTCATCACAGG...ATGGGGCCCAGGATTAGACAGGGCCCAAAGTGTGCCCTTCCCCATGGTTACCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002084.14 |
||
| CDS-3UTR GCA 90 bp | GGGGGAGGGGAGGAGCTTCCTTCATGTGATCCGAGAGCCTGGAGAAGGGTGGGAGAGGGATATAGAACATaGGCTGGGGTGGGGGCTTAT | + |
|
Preference number: 4 (lower is better) Translates to: GGGEELPSCDPRAWRRVGEGYRT*AGVGAY Trigger: ATAAGCCCCCACCCCAGCGCATGTTCTATATCCCTC...TCCCACCCTTCTCCAGGCTCTCGGATCACATGAAGGAAGCTCCTCCCCTCCCCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000002084.14 |
||
| CDS-3UTR CCA 90 bp | TCTACCTGTCCCAGAGTGGGGTCTTCAGGGAATGCAGGTAATTGGCTAGGAGGCCAGAGGCCTCTTGAGTaGGCTCCCCAGCTGGCACCT | + |
|
Preference number: 4 (lower is better) Translates to: STCPRVGSSGNAGNWLGGQRPLE*APQLAP Trigger: AGGTGCCAGCTGGGGAGCCCACTCAAGAGGCCTCTG...GCCTCCTAGCCAATTACCTGCATTCCCTGAAGACCCCACTCTGGGACAGGTAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002084.14 |
||
| CDS-3UTR CCA 90 bp | TTCAAGTACCCAGCCCAGAGTTCAGGGAAGCCAGGTGGGATGGATGAATCATCACCACCAGGCCAGCGATaGCTGAGGGCCAGGCTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: FKYPAQSSGKPGGMDESSPPGQR*LRARLC Trigger: GCACAGCCTGGCCCTCAGCCATCGCTGGCCTGGTGG...TGATGATTCATCCATCCCACCTGGCTTCCCTGAACTCTGGGCTGGGTACTTGAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114461.3 |
||
| CDS-3UTR TCA 90 bp | ACTATGCAGACCAAACTGGCCTCAAACTCACAGAGATTTACCCACCTCTGCTTCCAGCGTGGTCACCCGTaGGGGCCGGGGAGTGGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: TMQTKLASNSQRFTHLCFQRGHP*GPGSGE Trigger: CTCTCCACTCCCCGGCCCTCACGGGTGACCACGCTG...GAAGCAGAGGTGGGTAAATCTCTGTGAGTTTGAGGCCAGTTTGGTCTGCATAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114461.3 |
||
| CDS-3UTR TCA 90 bp | GATATGTTGGTCTTTCAGCTTCACCTTGGCCTATCTTCCACGTGGCTGGGGACATCCCCAGCTGGCACCTaGGGACCTCTGGCAGGAGTC | + |
|
Preference number: 4 (lower is better) Translates to: DMLVFQLHLGLSSTWLGTSPAGT*GPLAGV Trigger: GACTCCTGCCAGAGGTCCTCAGGTGCCAGCTGGGGA...TGTCCCCAGCCACGTGGAAGATAGGCCAAGGTGAAGCTGAAAGACCAACATATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114461.3 |
||
| CDS-3UTR TCA 90 bp | TCTACCTGTCCCAGAGTGGGGTCTTCAGGGAATGCAGGTAATTGGCTAGGAGGCTGGCAGGAAGGGCGATaGGGAGCCACTGCAGCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: STCPRVGSSGNAGNWLGGWQEGR*GATAAV Trigger: AACTGCTGCAGTGGCTCCTCATCGCCCTTCCTGCCA...GCCTCCTAGCCAATTACCTGCATTCCCTGAAGACCCCACTCTGGGACAGGTAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002084.14 |
||
| CDS-3UTR TCA 90 bp | GTGGGGTCTTCAGGGAATGCAGGTAATTGGCTAGGAGGCTTGGGAGGGGTAAGGCATCTGCAGCAGCTGTaGGGAGGTTTCGGGCAATGG | + |
|
Preference number: 4 (lower is better) Translates to: VGSSGNAGNWLGGLGGVRHLQQL*GGFGQW Trigger: CCATTGCCCGAAACCTCCTCACAGCTGCTGCAGATG...CCTTACCCCTCCCAAGCCTCCTAGCCAATTACCTGCATTCCCTGAAGACCCCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002084.14 |
||
| CDS-3UTR TCA 90 bp | CTGGGAAGTGTACCTTGTCCCCAGCTACTTGGCTCAGATTGGTCAGCACTTCAGACCCCAGGCCCAGCCTaGGCCTCCTCTAGATCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LGSVPCPQLLGSDWSALQTPGPA*ASSRSP Trigger: AGGAGATCTAGAGGAGGCTCAGGCTGGGCCTGGGGT...CTGAAGTGCTGACCAATCTGAGCCAAGTAGCTGGGGACAAGGTACACTTCCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114461.3 |
||
| CDS-3UTR GCA 90 bp | GAGGAGTGGGAGGGCCAGGGCTATATTCTCTTCATGGCTCAGGAGGAACTCTGTACCAGGGCAGCAGAATaGAGGGCCAGCAGCCCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: EEWEGQGYILFMAQEELCTRAAE*RASSPV Trigger: AACAGGGCTGCTGGCCCTGCATTCTGCTGCCCTGGT...ACAGAGTTCCTCCTGAGCCATGAAGAGAATATAGCCCTGGCCCTCCCACTCCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002084.14 |
||
| CDS-3UTR CCA 90 bp | GAGGAGTGGGAGGGCCAGGGCTATATTCTCTTCATGGCTCAGGAGGAACTCTGTTCCCGTTGCAGGATGTaGCGGAGATGCACGATGCCC | + |
|
Preference number: 4 (lower is better) Translates to: EEWEGQGYILFMAQEELCSRCRM*RRCTMP Trigger: GGGCATCGTGCATCTCCGCCACATCCTGCAACGGGA...ACAGAGTTCCTCCTGAGCCATGAAGAGAATATAGCCCTGGCCCTCCCACTCCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002084.14 |
||
| CDS-3UTR TCA 90 bp | GATATGTTGGTCTTTCAGCTTCACCTTGGCCTATCTTCCACGTGGCTGGGGACACACCAGACTGTACCATaGCCCCAGGCCCAGCCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: DMLVFQLHLGLSSTWLGTHQTVP*PQAQPE Trigger: CTCAGGCTGGGCCTGGGGTCATGGTACAGTCTGGTG...TGTCCCCAGCCACGTGGAAGATAGGCCAAGGTGAAGCTGAAAGACCAACATATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114461.3 |
||
| CDS-3UTR GCA 90 bp | CTGGGAAGTGTACCTTGTCCCCAGCTACTTGGCTCAGATTGGTCAGCACTTCAGACCAGGGCAGCAGAATaGAGGGCCAGCAGCCCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: LGSVPCPQLLGSDWSALQTRAAE*RASSPV Trigger: AACAGGGCTGCTGGCCCTGCATTCTGCTGCCCTGGT...CTGAAGTGCTGACCAATCTGAGCCAAGTAGCTGGGGACAAGGTACACTTCCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114461.3 |
||
| CDS-3UTR GCA 90 bp | GAGTGGGAGGGCCAGGGCTATATTCTCTTCATGGCTCAGGAGGAACTCTGTCCTATTGCTTCCAGCTGCTaGTCCGAGCAGCCCTTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: EWEGQGYILFMAQEELCPIASSC*SEQPFL Trigger: GAGGAAGGGCTGCTCGGAGCAGCAGCTGGAAGCAAT...AGGACAGAGTTCCTCCTGAGCCATGAAGAGAATATAGCCCTGGCCCTCCCACTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002084.14 |
||
| CDS-3UTR GCA 90 bp | ACCTGTCCCAGAGTGGGGTCTTCAGGGAATGCAGGTAATTGGCTAGGAGGCTTGGGCGGAGATGCACGATaGCCAGGATTGCTTCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: TCPRVGSSGNAGNWLGGLGGDAR*PGLLPA Trigger: AGCTGGAAGCAATCCTGGGCATCGTGCATCTCCGCC...CAAGCCTCCTAGCCAATTACCTGCATTCCCTGAAGACCCCACTCTGGGACAGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002084.14 |
||
| CDS-3UTR GCA 90 bp | GGGGGAGGGGAGGAGCTTCCTTCATGTGATCCGAGAGCCTGGAGAAGGGTGGGAACCAGCATCTTTGGCTaGTTGGAAGATCTTGCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: GGGEELPSCDPRAWRRVGTSIFG*LEDLAF Trigger: GAAGGCAAGATCTTCCAAGCAGCCAAAGATGCTGGT...TCCCACCCTTCTCCAGGCTCTCGGATCACATGAAGGAAGCTCCTCCCCTCCCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002084.14 |
||
| CDS-3UTR CCA 90 bp | AGACCAAACTGGCCTCAAACTCACAGAGATTTACCCACCTCTGCTTCCCAAGTGAGTGGGCTCCCCAGCTaGCACCTGAGGACCTCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: RPNWPQTHRDLPTSASQVSGLPS*HLRTSG Trigger: GCCAGAGGTCCTCAGGTGCCAGCTGGGGAGCCCACT...CACTTGGGAAGCAGAGGTGGGTAAATCTCTGTGAGTTTGAGGCCAGTTTGGTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114461.3 |
||
| CDS-3UTR GCA 90 bp | ATATCTACCTGTCCCAGAGTGGGGTCTTCAGGGAATGCAGGTAATTGGCTAGGACCAGGACCACAGCTGTaGGCTTCAGCGTGGTCACCC | + |
|
Preference number: 4 (lower is better) Translates to: ISTCPRVGSSGNAGNWLGPGPQL*ASAWSP Trigger: GGGTGACCACGCTGAAGCGCACAGCTGTGGTCCTGG...TCCTAGCCAATTACCTGCATTCCCTGAAGACCCCACTCTGGGACAGGTAGATAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002084.14 |
||
| CDS-3UTR GCA 90 bp | AGACCAAACTGGCCTCAAACTCACAGAGATTTACCCACCTCTGCTTCCCAAGTGAGCCACTGCAGCAGTTaGCAGCTAAAGGCCCGCGGG | + |
|
Preference number: 4 (lower is better) Translates to: RPNWPQTHRDLPTSASQVSHCSS*QLKARG Trigger: CCCGCGGGCCTTTAGCTGGCAACTGCTGCAGTGGCT...CACTTGGGAAGCAGAGGTGGGTAAATCTCTGTGAGTTTGAGGCCAGTTTGGTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114461.3 |
||
| CDS-3UTR CCA 90 bp | GATTTACCCACCTCTGCTTCCCAAGTGCTGGGATTAAAGGTATGTGTCACAACACTGTGCGCTTCAGCGTaGTCACCCGTGAGGGCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: DLPTSASQVLGLKVCVTTLCASA*SPVRAG Trigger: CCCGGCCCTCACGGGTGACCACGCTGAAGCGCACAG...TGTTGTGACACATACCTTTAATCCCAGCACTTGGGAAGCAGAGGTGGGTAAATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114461.3 |
||
| CDS-3UTR TCA 90 bp | TATCCTGTGGGACAGGGGCATTGGCTGGTCACACAAGGGGATGGCAACAAAGGGTCCTCTGTCAGAGACTaGTCAGGGTTTCGAAGTCGT | + |
|
Preference number: 4 (lower is better) Translates to: YPVGQGHWLVTQGDGNKGSSVRD*SGFRSR Trigger: ACGACTTCGAAACCCTGATCAGTCTCTGACAGAGGA...CCCTTTGTTGCCATCCCCTTGTGTGACCAGCCAATGCCCCTGTCCCACAGGATA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002084.14 |
||
| CDS-3UTR CCA 90 bp | CCTTCTTGGGTAACCATGGGGAAGGGCACACTTTGGGCCCTGTCTAATCCTGGGAGGCTGCCTTCTTCATaGCTTCTGAGTCTGACTCTG | + |
|
Preference number: 4 (lower is better) Translates to: PSWVTMGKGTLWALSNPGRLPSS*LLSLTL Trigger: CAGAGTCAGACTCAGAAGCCATGAAGAAGGCAGCCT...CCCAGGATTAGACAGGGCCCAAAGTGTGCCCTTCCCCATGGTTACCCAAGAAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002084.14 |
||
| CDS-3UTR CCA 90 bp | AGTGGGAGGGCCAGGGCTATATTCTCTTCATGGCTCAGGAGGAACTCTGTCCTTTCCACAACTTGGCCTTaGATCTTCAGGGGCCCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: SGRARAIFSSWLRRNSVLSTTWP*IFRGPS Trigger: AGAGGGGCCCCTGAAGATCCAAGGCCAAGTTGTGGA...AAGGACAGAGTTCCTCCTGAGCCATGAAGAGAATATAGCCCTGGCCCTCCCACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002084.14 |
||
| CDS-3UTR CCA 90 bp | AGTGGGAGGGCCAGGGCTATATTCTCTTCATGGCTCAGGAGGAACTCTGTCCTTGAACATGCGCTGGGGTaGGGGCTTATAGAGTACACC | + |
|
Preference number: 4 (lower is better) Translates to: SGRARAIFSSWLRRNSVLEHALG*GLIEYT Trigger: GGTGTACTCTATAAGCCCCCACCCCAGCGCATGTTC...AAGGACAGAGTTCCTCCTGAGCCATGAAGAGAATATAGCCCTGGCCCTCCCACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002084.14 |
||
| CDS-3UTR TCA 90 bp | GGCAACAAAGGGATGGATCAAAACAATGACAAGGATTTGGGTTTCGGCAGGGATCCTGGGACCAGGGGTTaGACTGGAGCTGCAGCTTCG | + |
|
Preference number: 4 (lower is better) Translates to: GNKGMDQNNDKDLGFGRDPGTRG*TGAAAS Trigger: CGAAGCTGCAGCTCCAGTTCAACCCCTGGTCCCAGG...ATCCCTGCCGAAACCCAAATCCTTGTCATTGTTTTGATCCATCCCTTTGTTGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002084.14 |
||
| CDS-3UTR GCA 90 bp | GATTTACCCACCTCTGCTTCCCAAGTGCTGGGATTAAAGGTATGTGTCACAACACCAGGACCACAGCTGTaGGCTTCAGCGTGGTCACCC | + |
|
Preference number: 4 (lower is better) Translates to: DLPTSASQVLGLKVCVTTPGPQL*ASAWSP Trigger: GGGTGACCACGCTGAAGCGCACAGCTGTGGTCCTGG...TGTTGTGACACATACCTTTAATCCCAGCACTTGGGAAGCAGAGGTGGGTAAATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114461.3 |
||
| CDS-3UTR GCA 90 bp | GGAAGGGCACACTTTGGGCCCTGTCTAATCCTGGGCCCCATTAGGCTGTTTTCATCACAGATGATCCCCTaGTCCACATCCACAACTTGG | + |
|
Preference number: 4 (lower is better) Translates to: GRAHFGPCLILGPIRLFSSQMIP*STSTTW Trigger: CCAAGTTGTGGATGTGGAGCAGGGGATCATCTGTGA...TGAAAACAGCCTAATGGGGCCCAGGATTAGACAGGGCCCAAAGTGTGCCCTTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000002084.14 |
||
| CDS-3UTR CCA 90 bp | GCATGCAGGGCAATGGGGGAGGGGAGGAGCTTCCTTCATGTGATCCGAGAGCCTACATCTTCAAATACCTaGAACATCTCGTACACCCTG | + |
|
Preference number: 4 (lower is better) Translates to: ACRAMGEGRSFLHVIREPTSSNT*NISYTL Trigger: CAGGGTGTACGAGATGTTCCAGGTATTTGAAGATGT...AGGCTCTCGGATCACATGAAGGAAGCTCCTCCCCTCCCCCATTGCCCTGCATGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002084.14 |
||
| CDS-3UTR CCA 90 bp | TTCAAGTACCCAGCCCAGAGTTCAGGGAAGCCAGGTGGGATGGATGAATCATCATCCACAACTTGGCCTTaGATCTTCAGGGGCCCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: FKYPAQSSGKPGGMDESSSTTWP*IFRGPS Trigger: AGAGGGGCCCCTGAAGATCCAAGGCCAAGTTGTGGA...TGATGATTCATCCATCCCACCTGGCTTCCCTGAACTCTGGGCTGGGTACTTGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114461.3 |
||
| CDS-3UTR CCA 90 bp | ATATCTACCTGTCCCAGAGTGGGGTCTTCAGGGAATGCAGGTAATTGGCTAGGACCAGGAGGGCGTACTTaGGCCTGTGGTAGAACATGC | + |
|
Preference number: 4 (lower is better) Translates to: ISTCPRVGSSGNAGNWLGPGGRT*ACGRTC Trigger: GCATGTTCTACCACAGGCCCAAGTACGCCCTCCTGG...TCCTAGCCAATTACCTGCATTCCCTGAAGACCCCACTCTGGGACAGGTAGATAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002084.14 |
||
| CDS-3UTR TCA 90 bp | GGCAACAAAGGGATGGATCAAAACAATGACAAGGATTTGGGTTTCGGCAGGGATGAAGCACGTTGGCTGTaGGGAACACCACCAGGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: GNKGMDQNNDKDLGFGRDEARWL*GTPPGQ Trigger: CTGGCCTGGTGGTGTTCCTCACAGCCAACGTGCTTC...ATCCCTGCCGAAACCCAAATCCTTGTCATTGTTTTGATCCATCCCTTTGTTGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002084.14 |
||
| CDS-3UTR GCA 90 bp | AAGGTATGTGTCACAACAGTAAGCAGTGGATACTTCTTAAGGTCACTCACTCCATGCAGCGGGCCAGTCTaGCGTCCAGGCGGGCAACAT | + |
|
Preference number: 4 (lower is better) Translates to: KVCVTTVSSGYFLRSLTPCSGPV*RPGGQH Trigger: ATGTTGCCCGCCTGGACGGCAGACTGGCCCGCTGCA...TGGAGTGAGTGACCTTAAGAAGTATCCACTGCTTACTGTTGTGACACATACCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114461.3 |
||
| CDS-3UTR CCA 90 bp | GGTATAGAGTCAGGACTGGGGACTTCCAAACCCTCCATCCCTCCCCAGGGAAAACATCCAGGAGTGGCTTaGTCAGGTTGGAATAAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: GIESGLGTSKPSIPPQGKHPGVA*SGWNKG Trigger: ACCTTTATTCCAACCTGACCAAGCCACTCCTGGATG...TTTTCCCTGGGGAGGGATGGAGGGTTTGGAAGTCCCCAGTCCTGACTCTATACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000002084.14 |
||
| CDS-3UTR CCA 90 bp | GAGGAGTGGGAGGGCCAGGGCTATATTCTCTTCATGGCTCAGGAGGAACTCTGTCGATACCAGCATCTTTaGCTGCTTGGAAGATCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: EEWEGQGYILFMAQEELCRYQHL*LLGRSC Trigger: GCAAGATCTTCCAAGCAGCCAAAGATGCTGGTATCG...ACAGAGTTCCTCCTGAGCCATGAAGAGAATATAGCCCTGGCCCTCCCACTCCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002084.14 |
||
| CDS-3UTR CCA 90 bp | CAGTGTGTCCCCATTCATATCTACCTGTCCCAGAGTGGGGTCTTCAGGGAATGCTGCAGCAAGTGTGTGTaGTACTTCCATAGGGAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: QCVPIHIYLSQSGVFRECCSKCV*YFHREG Trigger: ACCCTCCCTATGGAAGTACCACACACACTTGCTGCA...GCATTCCCTGAAGACCCCACTCTGGGACAGGTAGATATGAATGGGGACACACTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002084.14 |
||
| CDS-3UTR TCA 90 bp | GATATGTTGGTCTTTCAGCTTCACCTTGGCCTATCTTCCACGTGGCTGGGGACATCCTCTGTCAGAGACTaGTCAGGGTTTCGAAGTCGT | + |
|
Preference number: 4 (lower is better) Translates to: DMLVFQLHLGLSSTWLGTSSVRD*SGFRSR Trigger: ACGACTTCGAAACCCTGATCAGTCTCTGACAGAGGA...TGTCCCCAGCCACGTGGAAGATAGGCCAAGGTGAAGCTGAAAGACCAACATATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114461.3 |
||
| CDS-3UTR TCA 90 bp | GAGGAGTGGGAGGGCCAGGGCTATATTCTCTTCATGGCTCAGGAGGAACTCTGTCCTTATAAGATGACATaGTCCTTTCGGTGGCATCTG | + |
|
Preference number: 4 (lower is better) Translates to: EEWEGQGYILFMAQEELCPYKMT*SFRWHL Trigger: CAGATGCCACCGAAAGGATCATGTCATCTTATAAGG...ACAGAGTTCCTCCTGAGCCATGAAGAGAATATAGCCCTGGCCCTCCCACTCCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002084.14 |
||
| CDS-3UTR GCA 90 bp | GATATGTTGGTCTTTCAGCTTCACCTTGGCCTATCTTCCACGTGGCTGGGGACATCACAGATGATCCCCTaGTCCACATCCACAACTTGG | + |
|
Preference number: 4 (lower is better) Translates to: DMLVFQLHLGLSSTWLGTSQMIP*STSTTW Trigger: CCAAGTTGTGGATGTGGAGCAGGGGATCATCTGTGA...TGTCCCCAGCCACGTGGAAGATAGGCCAAGGTGAAGCTGAAAGACCAACATATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114461.3 |
||
| CDS-3UTR TCA 90 bp | AAGGTATGTGTCACAACAGTAAGCAGTGGATACTTCTTAAGGTCACTCACTCCAGAAGCACGTTGGCTGTaGGGAACACCACCAGGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: KVCVTTVSSGYFLRSLTPEARWL*GTPPGQ Trigger: CTGGCCTGGTGGTGTTCCTCACAGCCAACGTGCTTC...TGGAGTGAGTGACCTTAAGAAGTATCCACTGCTTACTGTTGTGACACATACCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114461.3 |
||
| CDS-3UTR GCA 90 bp | TATCAGCACTTACACTATTGCTTCAGGTCTCATGGTCAGAGATATGTTGGTCTTCATGCCAGCCTTGGTTaGGGTGGCTCCAGAGGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: YQHLHYCFRSHGQRYVGLHASLG*GGSRGL Trigger: GAGGCCTCTGGAGCCACCGCAACCAAGGCTGGCATG...AAGACCAACATATCTCTGACCATGAGACCTGAAGCAATAGTGTAAGTGCTGATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114461.3 |
||
| CDS-3UTR TCA 90 bp | AAGGTATGTGTCACAACAGTAAGCAGTGGATACTTCTTAAGGTCACTCACTCCACATCTGCAGCAGCTGTaGGGAGGTTTCGGGCAATGG | + |
|
Preference number: 4 (lower is better) Translates to: KVCVTTVSSGYFLRSLTPHLQQL*GGFGQW Trigger: CCATTGCCCGAAACCTCCTCACAGCTGCTGCAGATG...TGGAGTGAGTGACCTTAAGAAGTATCCACTGCTTACTGTTGTGACACATACCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114461.3 |
||
| CDS-3UTR CCA 90 bp | CACAGAGATTTACCCACCTCTGCTTCCCAAGTGCTGGGATTAAAGGTATGTGTCAGGCTGCCTTCTTCATaGCTTCTGAGTCTGACTCTG | + |
|
Preference number: 4 (lower is better) Translates to: HRDLPTSASQVLGLKVCVRLPSS*LLSLTL Trigger: CAGAGTCAGACTCAGAAGCCATGAAGAAGGCAGCCT...GACACATACCTTTAATCCCAGCACTTGGGAAGCAGAGGTGGGTAAATCTCTGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114461.3 |
||
| CDS-3UTR TCA 90 bp | TACTTCTTAAGGTCACTCACTCCACTCTCCAATTTATCTTTGGTTTCAAGTACCTGGCAGGAAGGGCGATaGGGAGCCACTGCAGCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: YFLRSLTPLSNLSLVSSTWQEGR*GATAAV Trigger: AACTGCTGCAGTGGCTCCTCATCGCCCTTCCTGCCA...GGTACTTGAAACCAAAGATAAATTGGAGAGTGGAGTGAGTGACCTTAAGAAGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114461.3 |
||
| CDS-3UTR CCA 90 bp | GGCAACAAAGGGATGGATCAAAACAATGACAAGGATTTGGGTTTCGGCAGGGATGTGGCTTGGTCAGGTTaGAATAAAGGTGGGCTACAG | + |
|
Preference number: 4 (lower is better) Translates to: GNKGMDQNNDKDLGFGRDVAWSG*NKGGLQ Trigger: CTGTAGCCCACCTTTATTCCAACCTGACCAAGCCAC...ATCCCTGCCGAAACCCAAATCCTTGTCATTGTTTTGATCCATCCCTTTGTTGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002084.14 |
||
| CDS-3UTR CCA 90 bp | ATGGCAACAAAGGGATGGATCAAAACAATGACAAGGATTTGGGTTTCGGCAGGGAGCCACATCCAGGAGTaGCTTGGTCAGGTTGGAATA | + |
|
Preference number: 4 (lower is better) Translates to: MATKGWIKTMTRIWVSAGSHIQE*LGQVGI Trigger: TATTCCAACCTGACCAAGCCACTCCTGGATGTGGCT...CCCTGCCGAAACCCAAATCCTTGTCATTGTTTTGATCCATCCCTTTGTTGCCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002084.14 |
||
| CDS-3UTR GCA 90 bp | TCTTTTATCAGCACTTACACTATTGCTTCAGGTCTCATGGTCAGAGATATGTTGAGCGCCAAGAGCCGCTaGAGGAATACCCGGTTCATG | + |
|
Preference number: 4 (lower is better) Translates to: SFISTYTIASGLMVRDMLSAKSR*RNTRFM Trigger: CATGAACCGGGTATTCCTGCAGCGGCTCTTGGCGCT...CAACATATCTCTGACCATGAGACCTGAAGCAATAGTGTAAGTGCTGATAAAAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114461.3 |
||
| CDS-3UTR CCA 90 bp | GATTTACCCACCTCTGCTTCCCAAGTGCTGGGATTAAAGGTATGTGTCACAACACATCCAGGAGTGGCTTaGTCAGGTTGGAATAAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: DLPTSASQVLGLKVCVTTHPGVA*SGWNKG Trigger: ACCTTTATTCCAACCTGACCAAGCCACTCCTGGATG...TGTTGTGACACATACCTTTAATCCCAGCACTTGGGAAGCAGAGGTGGGTAAATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114461.3 |
||
| CDS-3UTR CCA 90 bp | GCACTTACACTATTGCTTCAGGTCTCATGGTCAGAGATATGTTGGTCTTTCAGCAGCCACATCCAGGAGTaGCTTGGTCAGGTTGGAATA | + |
|
Preference number: 4 (lower is better) Translates to: ALTLLLQVSWSEICWSFSSHIQE*LGQVGI Trigger: TATTCCAACCTGACCAAGCCACTCCTGGATGTGGCT...GCTGAAAGACCAACATATCTCTGACCATGAGACCTGAAGCAATAGTGTAAGTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114461.3 |
||
| CDS-3UTR GCA 90 bp | TACTTCTTAAGGTCACTCACTCCACTCTCCAATTTATCTTTGGTTTCAAGTACCGCGATGAGGAGCCACTaGAGCAGTTGCCAGCTAAAG | + |
|
Preference number: 4 (lower is better) Translates to: YFLRSLTPLSNLSLVSSTAMRSH*SSCQLK Trigger: CTTTAGCTGGCAACTGCTGCAGTGGCTCCTCATCGC...GGTACTTGAAACCAAAGATAAATTGGAGAGTGGAGTGAGTGACCTTAAGAAGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114461.3 |
||
| CDS-3UTR GCA 90 bp | TACTTCTTAAGGTCACTCACTCCACTCTCCAATTTATCTTTGGTTTCAAGTACCCCTTTCGGTGGCATCTaGAGCAGCTGTGAGGAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: YFLRSLTPLSNLSLVSSTPFGGI*SSCEEV Trigger: AACCTCCTCACAGCTGCTGCAGATGCCACCGAAAGG...GGTACTTGAAACCAAAGATAAATTGGAGAGTGGAGTGAGTGACCTTAAGAAGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114461.3 |
||
| CDS-3UTR CCA 90 bp | AAGGTATGTGTCACAACAGTAAGCAGTGGATACTTCTTAAGGTCACTCACTCCAGTGGCTTGGTCAGGTTaGAATAAAGGTGGGCTACAG | + |
|
Preference number: 4 (lower is better) Translates to: KVCVTTVSSGYFLRSLTPVAWSG*NKGGLQ Trigger: CTGTAGCCCACCTTTATTCCAACCTGACCAAGCCAC...TGGAGTGAGTGACCTTAAGAAGTATCCACTGCTTACTGTTGTGACACATACCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114461.3 |
||
| 3UTR CAA 72 bp | TACACTATTGCTTCAGGTCTCATGGTCAGAGATATGTaGGTCTTTCAGCTTCACCTTGGCCTATCTTCCACG | + |
|
Preference number: 4 (lower is better) Translates to: YTIASGLMVRDM*VFQLHLGLSST Trigger: CGTGGAAGATAGGCCAAGGTGAAGCTGAAAGACCAACATATCTCTGACCATGAGACCTGAAGCAATAGTGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114461.3 |
||
| 3UTR CAA 72 bp | TTCTTAAGGTCACTCACTCCACTCTCCAATTTATCTTaGGTTTCAAGTACCCAGCCCAGAGTTCAGGGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: FLRSLTPLSNLS*VSSTQPRVQGS Trigger: GCTTCCCTGAACTCTGGGCTGGGTACTTGAAACCAAAGATAAATTGGAGAGTGGAGTGAGTGACCTTAAGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114461.3 |
||
| CDS-3UTR CCA 90 bp | GATTTACCCACCTCTGCTTCCCAAGTGCTGGGATTAAAGGTATGTGTCACAACAACATCTTCAAATACCTaGAACATCTCGTACACCCTG | + |
|
Preference number: 4 (lower is better) Translates to: DLPTSASQVLGLKVCVTTTSSNT*NISYTL Trigger: CAGGGTGTACGAGATGTTCCAGGTATTTGAAGATGT...TGTTGTGACACATACCTTTAATCCCAGCACTTGGGAAGCAGAGGTGGGTAAATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114461.3 |
||
| CDS-3UTR TCA 90 bp | AAGGTATGTGTCACAACAGTAAGCAGTGGATACTTCTTAAGGTCACTCACTCCACCTTATAAGATGACATaGTCCTTTCGGTGGCATCTG | + |
|
Preference number: 4 (lower is better) Translates to: KVCVTTVSSGYFLRSLTPPYKMT*SFRWHL Trigger: CAGATGCCACCGAAAGGATCATGTCATCTTATAAGG...TGGAGTGAGTGACCTTAAGAAGTATCCACTGCTTACTGTTGTGACACATACCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114461.3 |
||
| CDS TCA 90 bp | TCGAAGCACGTTGGCTGTGAGGAACACCACCAGGCCAGCGATGGCTaGGGGCCAGGCTGTGCCAGCTCCTCGGGATCGGGCAGCTCGAAG | + |
|
Preference number: 5 (lower is better) Translates to: SKHVGCEEHHQASDG*GPGCASSSGSGSSK Trigger: CTTCGAGCTGCCCGATCCCGAGGAGCTGGCACAGCCTGGCCCTCAGCCATCGCTGGCCTGGTGGTGTTCCTCACAGCCAACGTGCTTCGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002084.14 ENSMUST00000114461.3 |
||
| CDS GCA 90 bp | CGCCAAGAGCCGCTGCAGGAATACCCGGTTCATGCCAGCCTTGGTTaGGGTGGCTCCAGAGGCCTCTTGAGTGGGCTCCCCAGCTGGCAC | + |
|
Preference number: 5 (lower is better) Translates to: RQEPLQEYPVHASLG*GGSRGLLSGLPSWH Trigger: GTGCCAGCTGGGGAGCCCACTCAAGAGGCCTCTGGAGCCACCGCAACCAAGGCTGGCATGAACCGGGTATTCCTGCAGCGGCTCTTGGCG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002084.14 ENSMUST00000114461.3 |
||
| CDS CCA 90 bp | GGAGCGCCAAGAGCCGCTGCAGGAATACCCGGTTCATGCCAGCCTTaGTTGCGGTGGCTCCAGAGGCCTCTTGAGTGGGCTCCCCAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: GAPRAAAGIPGSCQP*LRWLQRPLEWAPQL Trigger: CAGCTGGGGAGCCCACTCAAGAGGCCTCTGGAGCCACCGCAACCAAGGCTGGCATGAACCGGGTATTCCTGCAGCGGCTCTTGGCGCTCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002084.14 ENSMUST00000114461.3 |
||
| CDS GCA 90 bp | GCAGCCTCAGGAGCGCCAAGAGCCGCTGCAGGAATACCCGGTTCATaGCAGCCTTGGTTGCGGTGGCTCCAGAGGCCTCTTGAGTGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: AASGAPRAAAGIPGS*QPWLRWLQRPLEWA Trigger: AGCCCACTCAAGAGGCCTCTGGAGCCACCGCAACCAAGGCTGGCATGAACCGGGTATTCCTGCAGCGGCTCTTGGCGCTCCTGAGGCTGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002084.14 ENSMUST00000114461.3 |
||
| CDS CCA 90 bp | GGTTCATGCCAGCCTTGGTTGCGGTGGCTCCAGAGGCCTCTTGAGTaGGCTCCCCAGCTGGCACCTGAGGACCTCTGGCAGGAGTCAGAC | + |
|
Preference number: 5 (lower is better) Translates to: GSCQPWLRWLQRPLE*APQLAPEDLWQESD Trigger: GTCTGACTCCTGCCAGAGGTCCTCAGGTGCCAGCTGGGGAGCCCACTCAAGAGGCCTCTGGAGCCACCGCAACCAAGGCTGGCATGAACC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002084.14 ENSMUST00000114461.3 |
||
| CDS TCA 90 bp | CTAGCTCCCCAAACTTGGGAGAGAAGGCTCGAAGCACGTTGGCTGTaGGGAACACCACCAGGCCAGCGATGGCTGAGGGCCAGGCTGTGC | + |
|
Preference number: 5 (lower is better) Translates to: LAPQTWERRLEARWL*GTPPGQRWLRARLC Trigger: GCACAGCCTGGCCCTCAGCCATCGCTGGCCTGGTGGTGTTCCTCACAGCCAACGTGCTTCGAGCCTTCTCTCCCAAGTTTGGGGAGCTAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002084.14 ENSMUST00000114461.3 |
||
| CDS GCA 90 bp | AGGATGTGGCGGAGATGCACGATGCCCAGGATTGCTTCCAGCTGCTaGTCCGAGCAGCCCTTCCTCCGCATGTCTTCCGCAGAGTCGGGA | + |
|
Preference number: 5 (lower is better) Translates to: RMWRRCTMPRIASSC*SEQPFLRMSSAESG Trigger: TCCCGACTCTGCGGAAGACATGCGGAGGAAGGGCTGCTCGGAGCAGCAGCTGGAAGCAATCCTGGGCATCGTGCATCTCCGCCACATCCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002084.14 |
||
| CDS-3UTR CAA 90 bp | GGAGTGGGAGGGCCAGGGCTATATTCTCTTCATGGCTCAGGAGGAACTCTGTCCGGCTCCAGAGGCCTCTaGAGTGGGCTCCCCAGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: GVGGPGLYSLHGSGGTLSGSRGL*SGLPSW Trigger: CCAGCTGGGGAGCCCACTCAAGAGGCCTCTGGAGCC...GGACAGAGTTCCTCCTGAGCCATGAAGAGAATATAGCCCTGGCCCTCCCACTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002084.14 |
||
| CDS-3UTR CAA 90 bp | GCATGCAGGGCAATGGGGGAGGGGAGGAGCTTCCTTCATGTGATCCGAGAGCCTCTCTTGCCACAGCCATaGGGGCCTGTGATGAGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: ACRAMGEGRSFLHVIREPLLPQP*GPVMSR Trigger: CCTGCTCATCACAGGCCCCAATGGCTGTGGCAAGAG...AGGCTCTCGGATCACATGAAGGAAGCTCCTCCCCTCCCCCATTGCCCTGCATGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000002084.14 |
||
| CDS GCA 90 bp | TTGATGAAAGTGGCAGGAAGGGCGATGAGGAGCCACTGCAGCAGTTaGCAGCTAAAGGCCCGCGGGTCCTTACGTACAATGCAGCGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: LMKVAGRAMRSHCSS*QLKARGSLRTMQRA Trigger: GGCCCGCTGCATTGTACGTAAGGACCCGCGGGCCTTTAGCTGGCAACTGCTGCAGTGGCTCCTCATCGCCCTTCCTGCCACTTTCATCAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002084.14 ENSMUST00000114461.3 |
||
| CDS-3UTR CAA 90 bp | GAGGAGTGGGAGGGCCAGGGCTATATTCTCTTCATGGCTCAGGAGGAACTCTGTGAGCCACTGCAGCAGTaGCCAGCTAAAGGCCCGCGG | + |
|
Preference number: 5 (lower is better) Translates to: EEWEGQGYILFMAQEELCEPLQQ*PAKGPR Trigger: CCGCGGGCCTTTAGCTGGCAACTGCTGCAGTGGCTC...ACAGAGTTCCTCCTGAGCCATGAAGAGAATATAGCCCTGGCCCTCCCACTCCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002084.14 |
||
| CDS CCA 90 bp | CAGAGGCCTCTTGAGTGGGCTCCCCAGCTGGCACCTGAGGACCTCTaGCAGGAGTCAGACACTGCCGTACTAGAGGGTAGATTTTGTGGA | + |
|
Preference number: 5 (lower is better) Translates to: QRPLEWAPQLAPEDL*QESDTAVLEGRFCG Trigger: TCCACAAAATCTACCCTCTAGTACGGCAGTGTCTGACTCCTGCCAGAGGTCCTCAGGTGCCAGCTGGGGAGCCCACTCAAGAGGCCTCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000002084.14 ENSMUST00000114461.3 |
||
| CDS CCA 90 bp | CCAGTTCCACCTCATGGCCCCCGTAGAAGGCAATTTCCTCTGAGTTaGCCACCACTCGAGAGTGCATGTAGCGCAGTTCCCCCTTTCGCC | + |
|
Preference number: 5 (lower is better) Translates to: PVPPHGPRRRQFPLS*PPLESACSAVPPFA Trigger: GGCGAAAGGGGGAACTGCGCTACATGCACTCTCGAGTGGTGGCCAACTCAGAGGAAATTGCCTTCTACGGGGGCCATGAGGTGGAACTGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000002084.14 ENSMUST00000114461.3 |
||
| CDS-3UTR CAA 90 bp | GAGTGGGAGGGCCAGGGCTATATTCTCTTCATGGCTCAGGAGGAACTCTGTCCTCGGTTCATGCCAGCCTaGGTTGCGGTGGCTCCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: EWEGQGYILFMAQEELCPRFMPA*VAVAPE Trigger: CTCTGGAGCCACCGCAACCAAGGCTGGCATGAACCG...AGGACAGAGTTCCTCCTGAGCCATGAAGAGAATATAGCCCTGGCCCTCCCACTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002084.14 |
||
| CDS-3UTR CAA 90 bp | TGGGTAACCATGGGGAAGGGCACACTTTGGGCCCTGTCTAATCCTGGGCCCCATATCCACAACTTGGCCTaGGATCTTCAGGGGCCCCTC | + |
|
Preference number: 5 (lower is better) Translates to: WVTMGKGTLWALSNPGPHIHNLA*DLQGPL Trigger: GAGGGGCCCCTGAAGATCCAAGGCCAAGTTGTGGAT...ATGGGGCCCAGGATTAGACAGGGCCCAAAGTGTGCCCTTCCCCATGGTTACCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000002084.14 |
||
| CDS-3UTR CAA 90 bp | GGAAGGGCACACTTTGGGCCCTGTCTAATCCTGGGCCCCATTAGGCTGTTTTCAGCACGATGCCCAGGATaGCTTCCAGCTGCTGCTCCG | + |
|
Preference number: 5 (lower is better) Translates to: GRAHFGPCLILGPIRLFSARCPG*LPAAAP Trigger: CGGAGCAGCAGCTGGAAGCAATCCTGGGCATCGTGC...TGAAAACAGCCTAATGGGGCCCAGGATTAGACAGGGCCCAAAGTGTGCCCTTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002084.14 |
||
| CDS-3UTR CAA 90 bp | CAGTGTGTCCCCATTCATATCTACCTGTCCCAGAGTGGGGTCTTCAGGGAATGCTCCTCCACCCTGATGTaGAGGCTGGCCACCACCACC | + |
|
Preference number: 5 (lower is better) Translates to: QCVPIHIYLSQSGVFRECSSTLM*RLATTT Trigger: GGTGGTGGTGGCCAGCCTCAACATCAGGGTGGAGGA...GCATTCCCTGAAGACCCCACTCTGGGACAGGTAGATATGAATGGGGACACACTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002084.14 |
||
| CDS GCA 90 bp | ATGGCACTGTTGATGAAAGTGGCAGGAAGGGCGATGAGGAGCCACTaGAGCAGTTGCCAGCTAAAGGCCCGCGGGTCCTTACGTACAATG | + |
|
Preference number: 5 (lower is better) Translates to: MALLMKVAGRAMRSH*SSCQLKARGSLRTM Trigger: CATTGTACGTAAGGACCCGCGGGCCTTTAGCTGGCAACTGCTGCAGTGGCTCCTCATCGCCCTTCCTGCCACTTTCATCAACAGTGCCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002084.14 ENSMUST00000114461.3 |
||
| CDS CCA 90 bp | CACGGACATGTAGGGCCTCTGAGGGATATAGAACATGCGCTGGGGTaGGGGCTTATAGAGTACACCACTGTATGTGGGCCAGAGTCCACC | + |
|
Preference number: 5 (lower is better) Translates to: HGHVGPLRDIEHALG*GLIEYTTVCGPEST Trigger: GGTGGACTCTGGCCCACATACAGTGGTGTACTCTATAAGCCCCCACCCCAGCGCATGTTCTATATCCCTCAGAGGCCCTACATGTCCGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002084.14 |
||
| CDS-3UTR CAA 90 bp | AAACTGGCCTCAAACTCACAGAGATTTACCCACCTCTGCTTCCCAAGTGCTGGGCGGTTCATGCCAGCCTaGGTTGCGGTGGCTCCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: KLASNSQRFTHLCFPSAGRFMPA*VAVAPE Trigger: CTCTGGAGCCACCGCAACCAAGGCTGGCATGAACCG...CCCAGCACTTGGGAAGCAGAGGTGGGTAAATCTCTGTGAGTTTGAGGCCAGTTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114461.3 |
||
| CDS-3UTR CAA 90 bp | GAAGGGACCACCCAGTCACCTCCTGTGCTGGCAGGGTACTCATGTTGGCAATTTAAGGCTCGAAGCACGTaGGCTGTGAGGAACACCACC | + |
|
Preference number: 5 (lower is better) Translates to: EGTTQSPPVLAGYSCWQFKARST*AVRNTT Trigger: GGTGGTGTTCCTCACAGCCAACGTGCTTCGAGCCTT...AAATTGCCAACATGAGTACCCTGCCAGCACAGGAGGTGACTGGGTGGTCCCTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002084.14 |
||
| CDS-3UTR CAA 90 bp | GAGGAGTGGGAGGGCCAGGGCTATATTCTCTTCATGGCTCAGGAGGAACTCTGTCGGAACAGAGAACTCTaGCCACAGCCATTGGGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: EEWEGQGYILFMAQEELCRNREL*PQPLGP Trigger: AGGCCCCAATGGCTGTGGCAAGAGTTCTCTGTTCCG...ACAGAGTTCCTCCTGAGCCATGAAGAGAATATAGCCCTGGCCCTCCCACTCCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002084.14 |
||
| CDS-3UTR CAA 90 bp | CAGCTTCACCTTGGCCTATCTTCCACGTGGCTGGGGACAATGTTGCTGCTAGCAGCAATTTCCTCTGAGTaGGCCACCACTCGAGAGTGC | + |
|
Preference number: 5 (lower is better) Translates to: QLHLGLSSTWLGTMLLLAAISSE*ATTREC Trigger: GCACTCTCGAGTGGTGGCCAACTCAGAGGAAATTGC...TGCTAGCAGCAACATTGTCCCCAGCCACGTGGAAGATAGGCCAAGGTGAAGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114461.3 |
||
| CDS CCA 90 bp | GAGTGTAGGAGGTCACAGCCACATCCAGGAGTGGCTTGGTCAGGTTaGAATAAAGGTGGGCTACAGAGGCAGCAAAGGCTACCACATCCT | + |
|
Preference number: 5 (lower is better) Translates to: ECRRSQPHPGVAWSG*NKGGLQRQQRLPHP Trigger: AGGATGTGGTAGCCTTTGCTGCCTCTGTAGCCCACCTTTATTCCAACCTGACCAAGCCACTCCTGGATGTGGCTGTGACCTCCTACACTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002084.14 ENSMUST00000114461.3 |
||
| CDS CCA 90 bp | AGAACATGCGCTGGGGTGGGGGCTTATAGAGTACACCACTGTATGTaGGCCAGAGTCCACCTAGGATTCGGAACAGAGAACTCTTGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: RTCAGVGAYRVHHCM*ARVHLGFGTENSCH Trigger: GTGGCAAGAGTTCTCTGTTCCGAATCCTAGGTGGACTCTGGCCCACATACAGTGGTGTACTCTATAAGCCCCCACCCCAGCGCATGTTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002084.14 |
||
| CDS-3UTR CAA 90 bp | CTTAAGGTCACTCACTCCACTCTCCAATTTATCTTTGGTTTCAAGTACCCAGCCGGCTCCAGAGGCCTCTaGAGTGGGCTCCCCAGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: LKVTHSTLQFIFGFKYPAGSRGL*SGLPSW Trigger: CCAGCTGGGGAGCCCACTCAAGAGGCCTCTGGAGCC...GGCTGGGTACTTGAAACCAAAGATAAATTGGAGAGTGGAGTGAGTGACCTTAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114461.3 |
||
| CDS-3UTR CAA 90 bp | AGTGGGAGGGCCAGGGCTATATTCTCTTCATGGCTCAGGAGGAACTCTGTCCTTGCAATTTCCTCTGAGTaGGCCACCACTCGAGAGTGC | + |
|
Preference number: 5 (lower is better) Translates to: SGRARAIFSSWLRRNSVLAISSE*ATTREC Trigger: GCACTCTCGAGTGGTGGCCAACTCAGAGGAAATTGC...AAGGACAGAGTTCCTCCTGAGCCATGAAGAGAATATAGCCCTGGCCCTCCCACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002084.14 |
||
| CDS-3UTR CAA 90 bp | AGTGGGAGGGCCAGGGCTATATTCTCTTCATGGCTCAGGAGGAACTCTGTCCTTCTCCACATCCACAACTaGGCCTTGGATCTTCAGGGG | + |
|
Preference number: 5 (lower is better) Translates to: SGRARAIFSSWLRRNSVLLHIHN*ALDLQG Trigger: CCCCTGAAGATCCAAGGCCAAGTTGTGGATGTGGAG...AAGGACAGAGTTCCTCCTGAGCCATGAAGAGAATATAGCCCTGGCCCTCCCACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002084.14 |
||
| CDS-3UTR CAA 90 bp | GGAGTGGGAGGGCCAGGGCTATATTCTCTTCATGGCTCAGGAGGAACTCTGTCCGCTGCTTGGAAGATCTaGCCTTCCACATCAATGCTC | + |
|
Preference number: 5 (lower is better) Translates to: GVGGPGLYSLHGSGGTLSAAWKI*PSTSML Trigger: GAGCATTGATGTGGAAGGCAAGATCTTCCAAGCAGC...GGACAGAGTTCCTCCTGAGCCATGAAGAGAATATAGCCCTGGCCCTCCCACTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002084.14 |
||
| CDS-3UTR CAA 90 bp | AGACCAAACTGGCCTCAAACTCACAGAGATTTACCCACCTCTGCTTCCCAAGTGAAGGCTCGAAGCACGTaGGCTGTGAGGAACACCACC | + |
|
Preference number: 5 (lower is better) Translates to: RPNWPQTHRDLPTSASQVKARST*AVRNTT Trigger: GGTGGTGTTCCTCACAGCCAACGTGCTTCGAGCCTT...CACTTGGGAAGCAGAGGTGGGTAAATCTCTGTGAGTTTGAGGCCAGTTTGGTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114461.3 |
||
| CDS-3UTR CAA 90 bp | CCTTCTTGGGTAACCATGGGGAAGGGCACACTTTGGGCCCTGTCTAATCCTGGGTCAAGCAGGATGAGGTaGATCTGTGAAGCTAGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: PSWVTMGKGTLWALSNPGSSRMR*ICEARS Trigger: AGACCTAGCTTCACAGATCAACCTCATCCTGCTTGA...CCCAGGATTAGACAGGGCCCAAAGTGTGCCCTTCCCCATGGTTACCCAAGAAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002084.14 |
||
| CDS-3UTR CAA 90 bp | TCTCCAATTTATCTTTGGTTTCAAGTACCCAGCCCAGAGTTCAGGGAAGCCAGGATCCACAACTTGGCCTaGGATCTTCAGGGGCCCCTC | + |
|
Preference number: 5 (lower is better) Translates to: SPIYLWFQVPSPEFREARIHNLA*DLQGPL Trigger: GAGGGGCCCCTGAAGATCCAAGGCCAAGTTGTGGAT...CCTGGCTTCCCTGAACTCTGGGCTGGGTACTTGAAACCAAAGATAAATTGGAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114461.3 |
||
| CDS GCA 90 bp | CCTCTGTCAGAGACTGATCAGGGTTTCGAAGTCGTCCATCCATGTTaGTTACTCGGTAGTAAGTCTGTTGGGAGAAGTAGAGTCCATAGG | + |
|
Preference number: 5 (lower is better) Translates to: PLSETDQGFEVVHPC*LLGSKSVGRSRVHR Trigger: CCTATGGACTCTACTTCTCCCAACAGACTTACTACCGAGTAAGCAACATGGATGGACGACTTCGAAACCCTGATCAGTCTCTGACAGAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002084.14 ENSMUST00000114461.3 |
||
| CDS-3UTR CAA 90 bp | CTTAAGGTCACTCACTCCACTCTCCAATTTATCTTTGGTTTCAAGTACCCAGCCCTCCACATCCACAACTaGGCCTTGGATCTTCAGGGG | + |
|
Preference number: 5 (lower is better) Translates to: LKVTHSTLQFIFGFKYPALHIHN*ALDLQG Trigger: CCCCTGAAGATCCAAGGCCAAGTTGTGGATGTGGAG...GGCTGGGTACTTGAAACCAAAGATAAATTGGAGAGTGGAGTGAGTGACCTTAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114461.3 |
||
| CDS-3UTR CAA 90 bp | ATATCTACCTGTCCCAGAGTGGGGTCTTCAGGGAATGCAGGTAATTGGCTAGGATCGGTAGTAAGTCTGTaGGGAGAAGTAGAGTCCATA | + |
|
Preference number: 5 (lower is better) Translates to: ISTCPRVGSSGNAGNWLGSVVSL*GEVESI Trigger: TATGGACTCTACTTCTCCCAACAGACTTACTACCGA...TCCTAGCCAATTACCTGCATTCCCTGAAGACCCCACTCTGGGACAGGTAGATAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002084.14 |
||
| CDS-3UTR CAA 90 bp | CACAGAGATTTACCCACCTCTGCTTCCCAAGTGCTGGGATTAAAGGTATGTGTCGGAATGCTTCTCTACTaGACCTACCCTGATGTTGAG | + |
|
Preference number: 5 (lower is better) Translates to: HRDLPTSASQVLGLKVCVGMLLY*TYPDVE Trigger: CTCAACATCAGGGTAGGTCAAGTAGAGAAGCATTCC...GACACATACCTTTAATCCCAGCACTTGGGAAGCAGAGGTGGGTAAATCTCTGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114461.3 |
||
| CDS-3UTR CAA 90 bp | CACAGAGATTTACCCACCTCTGCTTCCCAAGTGCTGGGATTAAAGGTATGTGTCTCGGTAGTAAGTCTGTaGGGAGAAGTAGAGTCCATA | + |
|
Preference number: 5 (lower is better) Translates to: HRDLPTSASQVLGLKVCVSVVSL*GEVESI Trigger: TATGGACTCTACTTCTCCCAACAGACTTACTACCGA...GACACATACCTTTAATCCCAGCACTTGGGAAGCAGAGGTGGGTAAATCTCTGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114461.3 |
||
| CDS-3UTR CAA 90 bp | AACTTACTATGCAGACCAAACTGGCCTCAAACTCACAGAGATTTACCCACCTCTTCAAGCAGGATGAGGTaGATCTGTGAAGCTAGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: NLLCRPNWPQTHRDLPTSSSRMR*ICEARS Trigger: AGACCTAGCTTCACAGATCAACCTCATCCTGCTTGA...AGAGGTGGGTAAATCTCTGTGAGTTTGAGGCCAGTTTGGTCTGCATAGTAAGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114461.3 |
||
| CDS CCA 72 bp | CAGCCTTGGTTGCGGTGGCTCCAGAGGCCTCTTGAGTaGGCTCCCCAGCTGGCACCTGAGGACCTCTGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: QPWLRWLQRPLE*APQLAPEDLWQ Trigger: CTGCCAGAGGTCCTCAGGTGCCAGCTGGGGAGCCCACTCAAGAGGCCTCTGGAGCCACCGCAACCAAGGCTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002084.14 ENSMUST00000114461.3 |
||
| CDS CAA 90 bp | GCGCCAAGAGCCGCTGCAGGAATACCCGGTTCATGCCAGCCTTGGTaGCGGTGGCTCCAGAGGCCTCTTGAGTGGGCTCCCCAGCTGGCA | + |
|
Preference number: 6 (lower is better) Translates to: APRAAAGIPGSCQPW*RWLQRPLEWAPQLA Trigger: TGCCAGCTGGGGAGCCCACTCAAGAGGCCTCTGGAGCCACCGCAACCAAGGCTGGCATGAACCGGGTATTCCTGCAGCGGCTCTTGGCGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002084.14 ENSMUST00000114461.3 |
||
| CDS GCA 72 bp | CCGCTGCAGGAATACCCGGTTCATGCCAGCCTTGGTTaGGGTGGCTCCAGAGGCCTCTTGAGTGGGCTCCCC | + |
|
Preference number: 6 (lower is better) Translates to: PLQEYPVHASLG*GGSRGLLSGLP Trigger: GGGGAGCCCACTCAAGAGGCCTCTGGAGCCACCGCAACCAAGGCTGGCATGAACCGGGTATTCCTGCAGCGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002084.14 ENSMUST00000114461.3 |
||
| CDS GCA 72 bp | CGGGGGAACAGCAGCCTCAGGAGCGCCAAGAGCCGCTaGAGGAATACCCGGTTCATGCCAGCCTTGGTTGCG | + |
|
Preference number: 6 (lower is better) Translates to: RGNSSLRSAKSR*RNTRFMPALVA Trigger: CGCAACCAAGGCTGGCATGAACCGGGTATTCCTGCAGCGGCTCTTGGCGCTCCTGAGGCTGCTGTTCCCCCG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000002084.14 ENSMUST00000114461.3 |
||
| CDS CAA 72 bp | GCCGCTGCAGGAATACCCGGTTCATGCCAGCCTTGGTaGCGGTGGCTCCAGAGGCCTCTTGAGTGGGCTCCC | + |
|
Preference number: 6 (lower is better) Translates to: AAAGIPGSCQPW*RWLQRPLEWAP Trigger: GGGAGCCCACTCAAGAGGCCTCTGGAGCCACCGCAACCAAGGCTGGCATGAACCGGGTATTCCTGCAGCGGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002084.14 ENSMUST00000114461.3 |
||
| CDS CAA 90 bp | TACCCGGTTCATGCCAGCCTTGGTTGCGGTGGCTCCAGAGGCCTCTaGAGTGGGCTCCCCAGCTGGCACCTGAGGACCTCTGGCAGGAGT | + |
|
Preference number: 6 (lower is better) Translates to: YPVHASLGCGGSRGL*SGLPSWHLRTSGRS Trigger: ACTCCTGCCAGAGGTCCTCAGGTGCCAGCTGGGGAGCCCACTCAAGAGGCCTCTGGAGCCACCGCAACCAAGGCTGGCATGAACCGGGTA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002084.14 ENSMUST00000114461.3 |
||
| CDS GCA 72 bp | GGAGCGCCAAGAGCCGCTGCAGGAATACCCGGTTCATaGCAGCCTTGGTTGCGGTGGCTCCAGAGGCCTCTT | + |
|
Preference number: 6 (lower is better) Translates to: GAPRAAAGIPGS*QPWLRWLQRPL Trigger: AAGAGGCCTCTGGAGCCACCGCAACCAAGGCTGGCATGAACCGGGTATTCCTGCAGCGGCTCTTGGCGCTCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002084.14 ENSMUST00000114461.3 |
||
| CDS CCA 72 bp | GCAGGAATACCCGGTTCATGCCAGCCTTGGTTGCGGTaGCTCCAGAGGCCTCTTGAGTGGGCTCCCCAGCTG | + |
|
Preference number: 6 (lower is better) Translates to: AGIPGSCQPWLR*LQRPLEWAPQL Trigger: CAGCTGGGGAGCCCACTCAAGAGGCCTCTGGAGCCACCGCAACCAAGGCTGGCATGAACCGGGTATTCCTGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002084.14 ENSMUST00000114461.3 |
||
| CDS GCA 72 bp | CCCGCGGGTCCTTACGTACAATGCAGCGGGCCAGTCTaGCGTCCAGGCGGGCAACATACACAGACAGGAAAG | + |
|
Preference number: 6 (lower is better) Translates to: PAGPYVQCSGPV*RPGGQHTQTGK Trigger: CTTTCCTGTCTGTGTATGTTGCCCGCCTGGACGGCAGACTGGCCCGCTGCATTGTACGTAAGGACCCGCGGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002084.14 ENSMUST00000114461.3 |
||
| CDS GCA 72 bp | CGGAGATGCACGATGCCCAGGATTGCTTCCAGCTGCTaGTCCGAGCAGCCCTTCCTCCGCATGTCTTCCGCA | + |
|
Preference number: 6 (lower is better) Translates to: RRCTMPRIASSC*SEQPFLRMSSA Trigger: TGCGGAAGACATGCGGAGGAAGGGCTGCTCGGAGCAGCAGCTGGAAGCAATCCTGGGCATCGTGCATCTCCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002084.14 |
||
| CDS GCA 72 bp | TGGCGGAGATGCACGATGCCCAGGATTGCTTCCAGCTaGTGCTCCGAGCAGCCCTTCCTCCGCATGTCTTCC | + |
|
Preference number: 6 (lower is better) Translates to: WRRCTMPRIASS*CSEQPFLRMSS Trigger: GGAAGACATGCGGAGGAAGGGCTGCTCGGAGCAGCAGCTGGAAGCAATCCTGGGCATCGTGCATCTCCGCCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002084.14 |
||
| CDS CAA 90 bp | TCTGCCACTAGCTCCCCAAACTTGGGAGAGAAGGCTCGAAGCACGTaGGCTGTGAGGAACACCACCAGGCCAGCGATGGCTGAGGGCCAG | + |
|
Preference number: 6 (lower is better) Translates to: SATSSPNLGEKARST*AVRNTTRPAMAEGQ Trigger: CTGGCCCTCAGCCATCGCTGGCCTGGTGGTGTTCCTCACAGCCAACGTGCTTCGAGCCTTCTCTCCCAAGTTTGGGGAGCTAGTGGCAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002084.14 ENSMUST00000114461.3 |
||
| CDS TCA 72 bp | CAAACTTGGGAGAGAAGGCTCGAAGCACGTTGGCTGTaGGGAACACCACCAGGCCAGCGATGGCTGAGGGCC | + |
|
Preference number: 6 (lower is better) Translates to: QTWERRLEARWL*GTPPGQRWLRA Trigger: GGCCCTCAGCCATCGCTGGCCTGGTGGTGTTCCTCACAGCCAACGTGCTTCGAGCCTTCTCTCCCAAGTTTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002084.14 ENSMUST00000114461.3 |
||
| CDS GCA 72 bp | GTGGCAGGAAGGGCGATGAGGAGCCACTGCAGCAGTTaGCAGCTAAAGGCCCGCGGGTCCTTACGTACAATG | + |
|
Preference number: 6 (lower is better) Translates to: VAGRAMRSHCSS*QLKARGSLRTM Trigger: CATTGTACGTAAGGACCCGCGGGCCTTTAGCTGGCAACTGCTGCAGTGGCTCCTCATCGCCCTTCCTGCCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002084.14 ENSMUST00000114461.3 |
||
| CDS CAA 90 bp | GTTGATGAAAGTGGCAGGAAGGGCGATGAGGAGCCACTGCAGCAGTaGCCAGCTAAAGGCCCGCGGGTCCTTACGTACAATGCAGCGGGC | + |
|
Preference number: 6 (lower is better) Translates to: VDESGRKGDEEPLQQ*PAKGPRVLTYNAAG Trigger: GCCCGCTGCATTGTACGTAAGGACCCGCGGGCCTTTAGCTGGCAACTGCTGCAGTGGCTCCTCATCGCCCTTCCTGCCACTTTCATCAAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002084.14 ENSMUST00000114461.3 |
||
| CDS GCA 72 bp | TTGATGAAAGTGGCAGGAAGGGCGATGAGGAGCCACTaGAGCAGTTGCCAGCTAAAGGCCCGCGGGTCCTTA | + |
|
Preference number: 6 (lower is better) Translates to: LMKVAGRAMRSH*SSCQLKARGSL Trigger: TAAGGACCCGCGGGCCTTTAGCTGGCAACTGCTGCAGTGGCTCCTCATCGCCCTTCCTGCCACTTTCATCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002084.14 ENSMUST00000114461.3 |
||
| CDS CCA 72 bp | CCTCATGGCCCCCGTAGAAGGCAATTTCCTCTGAGTTaGCCACCACTCGAGAGTGCATGTAGCGCAGTTCCC | + |
|
Preference number: 6 (lower is better) Translates to: PHGPRRRQFPLS*PPLESACSAVP Trigger: GGGAACTGCGCTACATGCACTCTCGAGTGGTGGCCAACTCAGAGGAAATTGCCTTCTACGGGGGCCATGAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000002084.14 ENSMUST00000114461.3 |
||
| CDS GCA 72 bp | CCACGGACATGTAGGGCCTCTGAGGGATATAGAACATaGGCTGGGGTGGGGGCTTATAGAGTACACCACTGT | + |
|
Preference number: 6 (lower is better) Translates to: PRTCRASEGYRT*AGVGAYRVHHC Trigger: ACAGTGGTGTACTCTATAAGCCCCCACCCCAGCGCATGTTCTATATCCCTCAGAGGCCCTACATGTCCGTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002084.14 |
||
| CDS CCA 72 bp | GCTGGGGTGGGGGCTTATAGAGTACACCACTGTATGTaGGCCAGAGTCCACCTAGGATTCGGAACAGAGAAC | + |
|
Preference number: 6 (lower is better) Translates to: AGVGAYRVHHCM*ARVHLGFGTEN Trigger: GTTCTCTGTTCCGAATCCTAGGTGGACTCTGGCCCACATACAGTGGTGTACTCTATAAGCCCCCACCCCAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002084.14 |
||
| CDS CCA 72 bp | GTAGGGCCTCTGAGGGATATAGAACATGCGCTGGGGTaGGGGCTTATAGAGTACACCACTGTATGTGGGCCA | + |
|
Preference number: 6 (lower is better) Translates to: VGPLRDIEHALG*GLIEYTTVCGP Trigger: TGGCCCACATACAGTGGTGTACTCTATAAGCCCCCACCCCAGCGCATGTTCTATATCCCTCAGAGGCCCTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002084.14 |
||
| CDS CCA 72 bp | AGGTCACAGCCACATCCAGGAGTGGCTTGGTCAGGTTaGAATAAAGGTGGGCTACAGAGGCAGCAAAGGCTA | + |
|
Preference number: 6 (lower is better) Translates to: RSQPHPGVAWSG*NKGGLQRQQRL Trigger: TAGCCTTTGCTGCCTCTGTAGCCCACCTTTATTCCAACCTGACCAAGCCACTCCTGGATGTGGCTGTGACCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002084.14 ENSMUST00000114461.3 |
||
| CDS TCA 72 bp | GAGGCAGCAAAGGCTACCACATCCTCTGTCAGAGACTaGTCAGGGTTTCGAAGTCGTCCATCCATGTTGCTT | + |
|
Preference number: 6 (lower is better) Translates to: EAAKATTSSVRD*SGFRSRPSMLL Trigger: AAGCAACATGGATGGACGACTTCGAAACCCTGATCAGTCTCTGACAGAGGATGTGGTAGCCTTTGCTGCCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002084.14 ENSMUST00000114461.3 |
||
| CDS GCA 72 bp | GGTGTGATGATAGGGATGTTCTCACAGATGATCCCCTaGTCCACATCCACAACTTGGCCTTGGATCTTCAGG | + |
|
Preference number: 6 (lower is better) Translates to: GVMIGMFSQMIP*STSTTWPWIFR Trigger: CCTGAAGATCCAAGGCCAAGTTGTGGATGTGGAGCAGGGGATCATCTGTGAGAACATCCCTATCATCACACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002084.14 ENSMUST00000114461.3 |
||
| CDS GCA 72 bp | GAGACTGATCAGGGTTTCGAAGTCGTCCATCCATGTTaGTTACTCGGTAGTAAGTCTGTTGGGAGAAGTAGA | + |
|
Preference number: 6 (lower is better) Translates to: ETDQGFEVVHPC*LLGSKSVGRSR Trigger: TCTACTTCTCCCAACAGACTTACTACCGAGTAAGCAACATGGATGGACGACTTCGAAACCCTGATCAGTCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002084.14 ENSMUST00000114461.3 |
||
| CDS CAA 72 bp | TCCTCTAGATCTCCTGTCCTCTTAAAACGACAGTGTTaGACATCTTCAAATACCTGGAACATCTCGTACACC | + |
|
Preference number: 6 (lower is better) Translates to: SSRSPVLLKRQC*TSSNTWNISYT Trigger: GGTGTACGAGATGTTCCAGGTATTTGAAGATGTCAAACACTGTCGTTTTAAGAGGACAGGAGATCTAGAGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002084.14 ENSMUST00000114461.3 |
||