RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ABCC8 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000040136

Ensembl transcript IDs: ENSMUST00000033123.8, ENSMUST00000209432.2, ENSMUST00000210110.2, ENSMUST00000210511.2, ENSMUST00000210655.2, ENSMUST00000210770.2

Found 275 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GAAACACTAGGCAAGCAAGTGAGGTGCGGGGCGGCACGCTGGCGCTaGCAGAGTCATTTGTCCGCGCGGACGAAGGAGGCGAAGACGCTG +
Preference number: 1 (lower is better)
Translates to: ETLGKQVRCGAARWR*QSHLSARTKEAKTL
Trigger: CAGCGTCTTCGCCTCCTTCGTCCGCGCGGACAAATGACTCTGCCAGCGCCAGCGTGCCGCCCCGCACCTCACTTGCTTGCCTAGTGTTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209432.2
3UTR CCA 90 bp CAGTACGAAACACTAGGCAAGCAAGTGAGGTGCGGGGCGGCACGCTaGCGCTGGCAGAGTCATTTGTCCGCGCGGACGAAGGAGGCGAAG +
Preference number: 1 (lower is better)
Translates to: QYETLGKQVRCGAAR*RWQSHLSARTKEAK
Trigger: CTTCGCCTCCTTCGTCCGCGCGGACAAATGACTCTGCCAGCGCCAGCGTGCCGCCCCGCACCTCACTTGCTTGCCTAGTGTTTCGTACTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209432.2
3UTR TCA 90 bp GAGGTGGCGGGATTCTGTCACCCTGTTGACTCAGGGGTGTTGGTCTaGAGACCAGGAGCCCAGCATCCAGCTGCAGACGAGCATCCTGCC +
Preference number: 1 (lower is better)
Translates to: EVAGFCHPVDSGVLV*RPGAQHPAADEHPA
Trigger: GGCAGGATGCTCGTCTGCAGCTGGATGCTGGGCTCCTGGTCTTCAGACCAACACCCCTGAGTCAACAGGGTGACAGAATCCCGCCACCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210511.2
3UTR TCA 90 bp CAGCTGGCATGTACAAATGGAGGTGGCGGGATTCTGTCACCCTGTTaGCTCAGGGGTGTTGGTCTGAAGACCAGGAGCCCAGCATCCAGC +
Preference number: 1 (lower is better)
Translates to: QLACTNGGGGILSPC*LRGVGLKTRSPASS
Trigger: GCTGGATGCTGGGCTCCTGGTCTTCAGACCAACACCCCTGAGTCAACAGGGTGACAGAATCCCGCCACCTCCATTTGTACATGCCAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210511.2
3UTR CCA 90 bp AGTCATTTGTCCGCGCGGACGAAGGAGGCGAAGACGCTGTCCTTCTaGCTCAGAAGCTTCTCCGGTTTGTCAAACTCCAGGATGGCTCCC +
Preference number: 1 (lower is better)
Translates to: SHLSARTKEAKTLSF*LRSFSGLSNSRMAP
Trigger: GGGAGCCATCCTGGAGTTTGACAAACCGGAGAAGCTTCTGAGCCAGAAGGACAGCGTCTTCGCCTCCTTCGTCCGCGCGGACAAATGACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209432.2
3UTR GCA 90 bp TTTACAAGTGATTTACAGTACGAAACACTAGGCAAGCAAGTGAGGTaGGGGGCGGCACGCTGGCGCTGGCAGAGTCATTTGTCCGCGCGG +
Preference number: 1 (lower is better)
Translates to: FTSDLQYETLGKQVR*GAARWRWQSHLSAR
Trigger: CCGCGCGGACAAATGACTCTGCCAGCGCCAGCGTGCCGCCCCGCACCTCACTTGCTTGCCTAGTGTTTCGTACTGTAAATCACTTGTAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000209432.2
3UTR CCA 90 bp GAGGTGATGGCAGCCATGAAAGCCATCCCAGCTGGCATGTACAAATaGAGGTGGCGGGATTCTGTCACCCTGTTGACTCAGGGGTGTTGG +
Preference number: 1 (lower is better)
Translates to: EVMAAMKAIPAGMYK*RWRDSVTLLTQGCW
Trigger: CCAACACCCCTGAGTCAACAGGGTGACAGAATCCCGCCACCTCCATTTGTACATGCCAGCTGGGATGGCTTTCATGGCTGCCATCACCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210511.2
3UTR CCA 90 bp ATGGCAGCCATGAAAGCCATCCCAGCTGGCATGTACAAATGGAGGTaGCGGGATTCTGTCACCCTGTTGACTCAGGGGTGTTGGTCTGAA +
Preference number: 1 (lower is better)
Translates to: MAAMKAIPAGMYKWR*RDSVTLLTQGCWSE
Trigger: TTCAGACCAACACCCCTGAGTCAACAGGGTGACAGAATCCCGCCACCTCCATTTGTACATGCCAGCTGGGATGGCTTTCATGGCTGCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210511.2
3UTR CAA 90 bp AAGCAAGTGAGGTGCGGGGCGGCACGCTGGCGCTGGCAGAGTCATTaGTCCGCGCGGACGAAGGAGGCGAAGACGCTGTCCTTCTGGCTC +
Preference number: 2 (lower is better)
Translates to: KQVRCGAARWRWQSH*SARTKEAKTLSFWL
Trigger: GAGCCAGAAGGACAGCGTCTTCGCCTCCTTCGTCCGCGCGGACAAATGACTCTGCCAGCGCCAGCGTGCCGCCCCGCACCTCACTTGCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209432.2
3UTR CAA 90 bp CCAGCTGGCATGTACAAATGGAGGTGGCGGGATTCTGTCACCCTGTaGACTCAGGGGTGTTGGTCTGAAGACCAGGAGCCCAGCATCCAG +
Preference number: 2 (lower is better)
Translates to: PAGMYKWRWRDSVTL*TQGCWSEDQEPSIQ
Trigger: CTGGATGCTGGGCTCCTGGTCTTCAGACCAACACCCCTGAGTCAACAGGGTGACAGAATCCCGCCACCTCCATTTGTACATGCCAGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210511.2
3UTR-3UTR GCA 90 bp CGGGATTCTGTCACCCTGTTGACTCAGGGGTGTTGGTCTGAAGACCAGGAGCCCGTCTGGGCTGTTTCCTaGCAGTCCCCATGTCGTGTA +
Preference number: 2 (lower is better)
Translates to: RDSVTLLTQGCWSEDQEPVWAVS*QSPCRV
Trigger: TACACGACATGGGGACTGGCAGGAAACAGCCCAGAC...GGGCTCCTGGTCTTCAGACCAACACCCCTGAGTCAACAGGGTGACAGAATCCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000210511.2
3UTR CAA 90 bp AAGGAGGCGAAGACGCTGTCCTTCTGGCTCAGAAGCTTCTCCGGTTaGTCAAACTCCAGGATGGCTCCCCTCTTCAGGACCATCACGAGG +
Preference number: 2 (lower is better)
Translates to: KEAKTLSFWLRSFSG*SNSRMAPLFRTITR
Trigger: CCTCGTGATGGTCCTGAAGAGGGGAGCCATCCTGGAGTTTGACAAACCGGAGAAGCTTCTGAGCCAGAAGGACAGCGTCTTCGCCTCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209432.2
3UTR-3UTR GCA 90 bp AGCTGGCATGTACAAATGGAGGTGGCGGGATTCTGTCACCCTGTTGACTCAGGGAGCCCAGCATCCAGCTaGAGACGAGCATCCTGCCTT +
Preference number: 2 (lower is better)
Translates to: SWHVQMEVAGFCHPVDSGSPASS*RRASCL
Trigger: AAGGCAGGATGCTCGTCTGCAGCTGGATGCTGGGCT...CCCTGAGTCAACAGGGTGACAGAATCCCGCCACCTCCATTTGTACATGCCAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210511.2
3UTR-3UTR CCA 90 bp AGCTGGCATGTACAAATGGAGGTGGCGGGATTCTGTCACCCTGTTGACTCAGGGGCAAAAGTGGCTGTCTaGGCTGTTTCCTGCCAGTCC +
Preference number: 2 (lower is better)
Translates to: SWHVQMEVAGFCHPVDSGAKVAV*AVSCQS
Trigger: GGACTGGCAGGAAACAGCCCAGACAGCCACTTTTGC...CCCTGAGTCAACAGGGTGACAGAATCCCGCCACCTCCATTTGTACATGCCAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000210511.2
3UTR-3UTR CCA 90 bp CCAGCTGGCATGTACAAATGGAGGTGGCGGGATTCTGTCACCCTGTTGACTCAGACGAGCATCCTGCCTTaGAGGAGACACACTGAGCAG +
Preference number: 2 (lower is better)
Translates to: PAGMYKWRWRDSVTLLTQTSILP*RRHTEQ
Trigger: CTGCTCAGTGTGTCTCCTCCAAGGCAGGATGCTCGT...CTGAGTCAACAGGGTGACAGAATCCCGCCACCTCCATTTGTACATGCCAGCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210511.2
3UTR-3UTR TCA 90 bp GGTTCTTTTATTCTCCCCTCTGCAAACCATAGTTTGCCTTCATCAGAACTGCATATGGCTCTGGGAACATaGAACAGCACAACCTTGGAT +
Preference number: 2 (lower is better)
Translates to: GSFILPSANHSLPSSELHMALGT*NSTTLD
Trigger: ATCCAAGGTTGTGCTGTTTCATGTTCCCAGAGCCAT...ATGCAGTTCTGATGAAGGCAAACTATGGTTTGCAGAGGGGAGAATAAAAGAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000210110.2
3UTR-3UTR CCA 90 bp AAGGTTCTTTTATTCTCCCCTCTGCAAACCATAGTTTGCCTTCATCAGAACTGCTTAGCCCCATGGCTCTaGGAACATGAAACAGCACAA +
Preference number: 2 (lower is better)
Translates to: KVLLFSPLQTIVCLHQNCLAPWL*EHETAQ
Trigger: TTGTGCTGTTTCATGTTCCCAGAGCCATGGGGCTAA...GCAGTTCTGATGAAGGCAAACTATGGTTTGCAGAGGGGAGAATAAAAGAACCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000210110.2
3UTR CCA 72 bp GGCAAGCAAGTGAGGTGCGGGGCGGCACGCTGGCGCTaGCAGAGTCATTTGTCCGCGCGGACGAAGGAGGCG +
Preference number: 3 (lower is better)
Translates to: GKQVRCGAARWR*QSHLSARTKEA
Trigger: CGCCTCCTTCGTCCGCGCGGACAAATGACTCTGCCAGCGCCAGCGTGCCGCCCCGCACCTCACTTGCTTGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209432.2
3UTR GCA 72 bp GGTGTTGGTCTGAAGACCAGGAGCCCAGCATCCAGCTaGAGACGAGCATCCTGCCTTGGAGGAGACACACTG +
Preference number: 3 (lower is better)
Translates to: GVGLKTRSPASS*RRASCLGGDTL
Trigger: CAGTGTGTCTCCTCCAAGGCAGGATGCTCGTCTGCAGCTGGATGCTGGGCTCCTGGTCTTCAGACCAACACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210511.2
3UTR CCA 72 bp TGGCGGGATTCTGTCACCCTGTTGACTCAGGGGTGTTaGTCTGAAGACCAGGAGCCCAGCATCCAGCTGCAG +
Preference number: 3 (lower is better)
Translates to: WRDSVTLLTQGC*SEDQEPSIQLQ
Trigger: CTGCAGCTGGATGCTGGGCTCCTGGTCTTCAGACCAACACCCCTGAGTCAACAGGGTGACAGAATCCCGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210511.2
3UTR CCA 72 bp TCCGCGCGGACGAAGGAGGCGAAGACGCTGTCCTTCTaGCTCAGAAGCTTCTCCGGTTTGTCAAACTCCAGG +
Preference number: 3 (lower is better)
Translates to: SARTKEAKTLSF*LRSFSGLSNSR
Trigger: CCTGGAGTTTGACAAACCGGAGAAGCTTCTGAGCCAGAAGGACAGCGTCTTCGCCTCCTTCGTCCGCGCGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209432.2
3UTR TCA 72 bp GGATTCTGTCACCCTGTTGACTCAGGGGTGTTGGTCTaGAGACCAGGAGCCCAGCATCCAGCTGCAGACGAG +
Preference number: 3 (lower is better)
Translates to: GFCHPVDSGVLV*RPGAQHPAADE
Trigger: CTCGTCTGCAGCTGGATGCTGGGCTCCTGGTCTTCAGACCAACACCCCTGAGTCAACAGGGTGACAGAATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210511.2
3UTR CCA 72 bp GCAGCCATGAAAGCCATCCCAGCTGGCATGTACAAATaGAGGTGGCGGGATTCTGTCACCCTGTTGACTCAG +
Preference number: 3 (lower is better)
Translates to: AAMKAIPAGMYK*RWRDSVTLLTQ
Trigger: CTGAGTCAACAGGGTGACAGAATCCCGCCACCTCCATTTGTACATGCCAGCTGGGATGGCTTTCATGGCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210511.2
3UTR GCA 72 bp GGGATAGTAGCAAAAGTGGCTGTCTGGGCTGTTTCCTaGCAGTCCCCATGTCGTGTACATAGATCCTCTGCC +
Preference number: 3 (lower is better)
Translates to: GIVAKVAVWAVS*QSPCRVHRSSA
Trigger: GGCAGAGGATCTATGTACACGACATGGGGACTGGCAGGAAACAGCCCAGACAGCCACTTTTGCTACTATCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000210511.2
3UTR CCA 72 bp ATGAAAGCCATCCCAGCTGGCATGTACAAATGGAGGTaGCGGGATTCTGTCACCCTGTTGACTCAGGGGTGT +
Preference number: 3 (lower is better)
Translates to: MKAIPAGMYKWR*RDSVTLLTQGC
Trigger: ACACCCCTGAGTCAACAGGGTGACAGAATCCCGCCACCTCCATTTGTACATGCCAGCTGGGATGGCTTTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210511.2
3UTR TCA 72 bp AGAACTGCATGGCTTAGCCCCATGGCTCTGGGAACATaGAACAGCACAACCTTGGATTCGCACTTAGCACTC +
Preference number: 3 (lower is better)
Translates to: RTAWLSPMALGT*NSTTLDSHLAL
Trigger: GAGTGCTAAGTGCGAATCCAAGGTTGTGCTGTTTCATGTTCCCAGAGCCATGGGGCTAAGCCATGCAGTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210110.2
3UTR CCA 72 bp CCTTCATCAGAACTGCATGGCTTAGCCCCATGGCTCTaGGAACATGAAACAGCACAACCTTGGATTCGCACT +
Preference number: 3 (lower is better)
Translates to: PSSELHGLAPWL*EHETAQPWIRT
Trigger: AGTGCGAATCCAAGGTTGTGCTGTTTCATGTTCCCAGAGCCATGGGGCTAAGCCATGCAGTTCTGATGAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210110.2
CDS-3UTR GCA 90 bp CGAAACACTAGGCAAGCAAGTGAGGTGCGGGGCGGCACGCTGGCGCTGGCAGAGGCCCCGGAGACCCTCTaGATCTCCCCCAGGGTGGCC +
Preference number: 4 (lower is better)
Translates to: RNTRQASEVRGGTLALAEAPETL*ISPRVA
Trigger: GGCCACCCTGGGGGAGATGCAGAGGGTCTCCGGGGC...CTCTGCCAGCGCCAGCGTGCCGCCCCGCACCTCACTTGCTTGCCTAGTGTTTCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000210655.2
CDS-3UTR TCA 90 bp CGAAACACTAGGCAAGCAAGTGAGGTGCGGGGCGGCACGCTGGCGCTGGCAGAGGCACGGGGCAGGCCCTaGGACGGTTCTGGGGCTTTC +
Preference number: 4 (lower is better)
Translates to: RNTRQASEVRGGTLALAEARGRP*DGSGAF
Trigger: GAAAGCCCCAGAACCGTCTCAGGGCCTGCCCCGTGC...CTCTGCCAGCGCCAGCGTGCCGCCCCGCACCTCACTTGCTTGCCTAGTGTTTCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000210655.2
CDS-3UTR CCA 90 bp CGAAACACTAGGCAAGCAAGTGAGGTGCGGGGCGGCACGCTGGCGCTGGCAGAGCGGGGCCTCTGCTCCTaGCATCCGAGTCGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: RNTRQASEVRGGTLALAERGLCS*HPSRLL
Trigger: CAGCAGCCGACTCGGATGCCAGGAGCAGAGGCCCCG...CTCTGCCAGCGCCAGCGTGCCGCCCCGCACCTCACTTGCTTGCCTAGTGTTTCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000210655.2
CDS-3UTR TCA 90 bp CGAAACACTAGGCAAGCAAGTGAGGTGCGGGGCGGCACGCTGGCGCTGGCAGAGCCATCAAGGCGTAGGTaGGGCCCAGGCCCACCAGAC +
Preference number: 4 (lower is better)
Translates to: RNTRQASEVRGGTLALAEPSRRR*GPGPPD
Trigger: GTCTGGTGGGCCTGGGCCTCACCTACGCCTTGATGG...CTCTGCCAGCGCCAGCGTGCCGCCCCGCACCTCACTTGCTTGCCTAGTGTTTCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210655.2
CDS-3UTR GCA 90 bp CGAAACACTAGGCAAGCAAGTGAGGTGCGGGGCGGCACGCTGGCGCTGGCAGAGAGGCTACGGGGCCTCTaGTCCTGGCATCCGAGTCGG +
Preference number: 4 (lower is better)
Translates to: RNTRQASEVRGGTLALAERLRGL*SWHPSR
Trigger: CCGACTCGGATGCCAGGAGCAGAGGCCCCGTAGCCT...CTCTGCCAGCGCCAGCGTGCCGCCCCGCACCTCACTTGCTTGCCTAGTGTTTCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000210655.2
CDS-3UTR GCA 90 bp CGGGGCGGCACGCTGGCGCTGGCAGAGTCATTTGTCCGCGCGGACGAAGGAGGCGACCACAGTGCGGTCTaGGAAGGCTGTCATCACCAC +
Preference number: 4 (lower is better)
Translates to: RGGTLALAESFVRADEGGDHSAV*EGCHHH
Trigger: GTGGTGATGACAGCCTTCGCAGACCGCACTGTGGTC...GCCTCCTTCGTCCGCGCGGACAAATGACTCTGCCAGCGCCAGCGTGCCGCCCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209432.2
CDS-3UTR TCA 90 bp GTACGAAACACTAGGCAAGCAAGTGAGGTGCGGGGCGGCACGCTGGCGCTGGCAGGGCGCATTCCTGGCTaGGGGAGCAGTTCCTGGCAG +
Preference number: 4 (lower is better)
Translates to: VRNTRQASEVRGGTLALAGRIPG*GSSSWQ
Trigger: CTGCCAGGAACTGCTCCCTCAGCCAGGAATGCGCCC...TGCCAGCGCCAGCGTGCCGCCCCGCACCTCACTTGCTTGCCTAGTGTTTCGTAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000210655.2
CDS-3UTR TCA 90 bp CGAAACACTAGGCAAGCAAGTGAGGTGCGGGGCGGCACGCTGGCGCTGGCAGAGTGCAGTGCGCGATGGTaGCCACAGTGCGGTCTGCGA +
Preference number: 4 (lower is better)
Translates to: RNTRQASEVRGGTLALAECSARW*PQCGLR
Trigger: TCGCAGACCGCACTGTGGTCACCATCGCGCACTGCA...CTCTGCCAGCGCCAGCGTGCCGCCCCGCACCTCACTTGCTTGCCTAGTGTTTCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209432.2
CDS-3UTR CCA 90 bp CGAAACACTAGGCAAGCAAGTGAGGTGCGGGGCGGCACGCTGGCGCTGGCAGAGCCCGCCATGGGATCTTaGCTCGCTGATGCAGCACCG +
Preference number: 4 (lower is better)
Translates to: RNTRQASEVRGGTLALAEPAMGS*LADAAP
Trigger: CGGTGCTGCATCAGCGAGCCAAGATCCCATGGCGGG...CTCTGCCAGCGCCAGCGTGCCGCCCCGCACCTCACTTGCTTGCCTAGTGTTTCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210655.2
CDS-3UTR CCA 90 bp CGAAACACTAGGCAAGCAAGTGAGGTGCGGGGCGGCACGCTGGCGCTGGCAGAGGGCATCCAGGCCTCCTaGCAGTGCCTTCACCACCAG +
Preference number: 4 (lower is better)
Translates to: RNTRQASEVRGGTLALAEGIQAS*QCLHHQ
Trigger: CTGGTGGTGAAGGCACTGCCAGGAGGCCTGGATGCC...CTCTGCCAGCGCCAGCGTGCCGCCCCGCACCTCACTTGCTTGCCTAGTGTTTCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000210655.2
ENSMUST00000210770.2
CDS-3UTR GCA 90 bp GTACGAAACACTAGGCAAGCAAGTGAGGTGCGGGGCGGCACGCTGGCGCTGGCAGGCATCCGAGTCGGCTaGTGTCTCCCGCTCTGGGTT +
Preference number: 4 (lower is better)
Translates to: VRNTRQASEVRGGTLALAGIRVG*CLPLWV
Trigger: AACCCAGAGCGGGAGACAGCAGCCGACTCGGATGCC...TGCCAGCGCCAGCGTGCCGCCCCGCACCTCACTTGCTTGCCTAGTGTTTCGTAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210655.2
CDS-3UTR GCA 90 bp CGAAACACTAGGCAAGCAAGTGAGGTGCGGGGCGGCACGCTGGCGCTGGCAGAGGTTGTGTCATCCAGCTaGTGCAGGTCCCTGGACGCC +
Preference number: 4 (lower is better)
Translates to: RNTRQASEVRGGTLALAEVVSSS*CRSLDA
Trigger: GGCGTCCAGGGACCTGCAGCAGCTGGATGACACAAC...CTCTGCCAGCGCCAGCGTGCCGCCCCGCACCTCACTTGCTTGCCTAGTGTTTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210655.2
CDS-3UTR GCA 90 bp CGAAACACTAGGCAAGCAAGTGAGGTGCGGGGCGGCACGCTGGCGCTGGCAGAGACTTCCCACTGCCTGTaGGGCCGCAGATCCCGATCT +
Preference number: 4 (lower is better)
Translates to: RNTRQASEVRGGTLALAETSHCL*GRRSRS
Trigger: AGATCGGGATCTGCGGCCGCACAGGCAGTGGGAAGT...CTCTGCCAGCGCCAGCGTGCCGCCCCGCACCTCACTTGCTTGCCTAGTGTTTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210655.2
CDS-3UTR GCA 90 bp CGAAACACTAGGCAAGCAAGTGAGGTGCGGGGCGGCACGCTGGCGCTGGCAGAGCAGGCCTCCTGGCAGTaGCTTCACCACCAGCTTCAG +
Preference number: 4 (lower is better)
Translates to: RNTRQASEVRGGTLALAEQASWQ*LHHQLQ
Trigger: CTGAAGCTGGTGGTGAAGGCACTGCCAGGAGGCCTG...CTCTGCCAGCGCCAGCGTGCCGCCCCGCACCTCACTTGCTTGCCTAGTGTTTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000210655.2
ENSMUST00000210770.2
CDS-3UTR CCA 90 bp TACGAAACACTAGGCAAGCAAGTGAGGTGCGGGGCGGCACGCTGGCGCTGGCAGGCATCTCCCCCAGGGTaGCCAGAAGGAGCGAGGACT +
Preference number: 4 (lower is better)
Translates to: YETLGKQVRCGAARWRWQASPPG*PEGART
Trigger: AGTCCTCGCTCCTTCTGGCCACCCTGGGGGAGATGC...CTGCCAGCGCCAGCGTGCCGCCCCGCACCTCACTTGCTTGCCTAGTGTTTCGTA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000210655.2
CDS-3UTR CCA 90 bp CGAAACACTAGGCAAGCAAGTGAGGTGCGGGGCGGCACGCTGGCGCTGGCAGAGACCACCAGCTTCAGCTaGGCGATCTCCAGAGCCTCC +
Preference number: 4 (lower is better)
Translates to: RNTRQASEVRGGTLALAETTSFS*AISRAS
Trigger: GGAGGCTCTGGAGATCGCCCAGCTGAAGCTGGTGGT...CTCTGCCAGCGCCAGCGTGCCGCCCCGCACCTCACTTGCTTGCCTAGTGTTTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000210655.2
ENSMUST00000210770.2
CDS-3UTR TCA 90 bp CGAAACACTAGGCAAGCAAGTGAGGTGCGGGGCGGCACGCTGGCGCTGGCAGAGACCTCTGGAAGTCCTTaGGCGTCCCCTCCCTCTGAA +
Preference number: 4 (lower is better)
Translates to: RNTRQASEVRGGTLALAETSGSP*ASPPSE
Trigger: TTCAGAGGGAGGGGACGCTCAAGGACTTCCAGAGGT...CTCTGCCAGCGCCAGCGTGCCGCCCCGCACCTCACTTGCTTGCCTAGTGTTTCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000210655.2
CDS-3UTR GCA 90 bp GTACGAAACACTAGGCAAGCAAGTGAGGTGCGGGGCGGCACGCTGGCGCTGGCATTGCCGCAGCCCACCTaGCCCACAATCATGGTCAGC +
Preference number: 4 (lower is better)
Translates to: VRNTRQASEVRGGTLALALPQPT*PTIMVS
Trigger: GCTGACCATGATTGTGGGGCAGGTGGGCTGCGGCAA...TGCCAGCGCCAGCGTGCCGCCCCGCACCTCACTTGCTTGCCTAGTGTTTCGTAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210655.2
CDS-3UTR GCA 90 bp CGAAACACTAGGCAAGCAAGTGAGGTGCGGGGCGGCACGCTGGCGCTGGCAGAGGGAGCAGCTCAAGGATaGCAGCCTGCATCAGGTGGT +
Preference number: 4 (lower is better)
Translates to: RNTRQASEVRGGTLALAEGAAQG*QPASGG
Trigger: ACCACCTGATGCAGGCTGGCATCCTTGAGCTGCTCC...CTCTGCCAGCGCCAGCGTGCCGCCCCGCACCTCACTTGCTTGCCTAGTGTTTCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210655.2
CDS-3UTR GCA 90 bp TACGAAACACTAGGCAAGCAAGTGAGGTGCGGGGCGGCACGCTGGCGCTGGCAGTTGAGCAGGCTGCGGTaGAGCCTCTTGGCCACCTTC +
Preference number: 4 (lower is better)
Translates to: YETLGKQVRCGAARWRWQLSRLR*SLLATF
Trigger: GAAGGTGGCCAAGAGGCTGCACCGCAGCCTGCTCAA...CTGCCAGCGCCAGCGTGCCGCCCCGCACCTCACTTGCTTGCCTAGTGTTTCGTA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210655.2
CDS-3UTR CCA 90 bp CGAAACACTAGGCAAGCAAGTGAGGTGCGGGGCGGCACGCTGGCGCTGGCAGAGTGGCACTCAGACCTCTaGAAGTCCTTGAGCGTCCCC +
Preference number: 4 (lower is better)
Translates to: RNTRQASEVRGGTLALAEWHSDL*KSLSVP
Trigger: GGGGACGCTCAAGGACTTCCAGAGGTCTGAGTGCCA...CTCTGCCAGCGCCAGCGTGCCGCCCCGCACCTCACTTGCTTGCCTAGTGTTTCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210655.2
CDS-3UTR CCA 90 bp GTACGAAACACTAGGCAAGCAAGTGAGGTGCGGGGCGGCACGCTGGCGCTGGCATCCAGGGCGCATTCCTaGCTGAGGGAGCAGTTCCTG +
Preference number: 4 (lower is better)
Translates to: VRNTRQASEVRGGTLALASRAHS*LREQFL
Trigger: CAGGAACTGCTCCCTCAGCCAGGAATGCGCCCTGGA...TGCCAGCGCCAGCGTGCCGCCCCGCACCTCACTTGCTTGCCTAGTGTTTCGTAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210655.2
CDS-3UTR CCA 90 bp TACGAAACACTAGGCAAGCAAGTGAGGTGCGGGGCGGCACGCTGGCGCTGGCAGTCCAGGAGCTTCTGCTaGAACCGGGCCTCGTACCTG +
Preference number: 4 (lower is better)
Translates to: YETLGKQVRCGAARWRWQSRSFC*NRASYL
Trigger: CAGGTACGAGGCCCGGTTCCAGCAGAAGCTCCTGGA...CTGCCAGCGCCAGCGTGCCGCCCCGCACCTCACTTGCTTGCCTAGTGTTTCGTA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210655.2
CDS-3UTR TCA 90 bp GTACGAAACACTAGGCAAGCAAGTGAGGTGCGGGGCGGCACGCTGGCGCTGGCAAGGCACGGATGGTGGTaGGTCCTTCCACGGTTTCAG +
Preference number: 4 (lower is better)
Translates to: VRNTRQASEVRGGTLALARHGWW*VLPRFQ
Trigger: CTGAAACCGTGGAAGGACTCACCACCATCCGTGCCT...TGCCAGCGCCAGCGTGCCGCCCCGCACCTCACTTGCTTGCCTAGTGTTTCGTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210655.2
CDS-3UTR TCA 90 bp GTACGAAACACTAGGCAAGCAAGTGAGGTGCGGGGCGGCACGCTGGCGCTGGCACAGGGTCCTGTAGGATaGTGGAGAGGCGTGAACGGA +
Preference number: 4 (lower is better)
Translates to: VRNTRQASEVRGGTLALAQGPVG*WRGVNG
Trigger: TCCGTTCACGCCTCTCCATCATCCTACAGGACCCTG...TGCCAGCGCCAGCGTGCCGCCCCGCACCTCACTTGCTTGCCTAGTGTTTCGTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210655.2
CDS-3UTR GCA 90 bp CGAAACACTAGGCAAGCAAGTGAGGTGCGGGGCGGCACGCTGGCGCTGGCAGAGTCAAGGATGCCAGCCTaGATCAGGTGGTCGCTCAGA +
Preference number: 4 (lower is better)
Translates to: RNTRQASEVRGGTLALAESRMPA*IRWSLR
Trigger: TCTGAGCGACCACCTGATGCAGGCTGGCATCCTTGA...CTCTGCCAGCGCCAGCGTGCCGCCCCGCACCTCACTTGCTTGCCTAGTGTTTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210655.2
CDS-3UTR GCA 90 bp TACGAAACACTAGGCAAGCAAGTGAGGTGCGGGGCGGCACGCTGGCGCTGGCAGGCAGAGAGCTCCCTGTaGAGGGAGTTGGAGATGGAG +
Preference number: 4 (lower is better)
Translates to: YETLGKQVRCGAARWRWQAESSL*RELEME
Trigger: CTCCATCTCCAACTCCCTGCACAGGGAGCTCTCTGC...CTGCCAGCGCCAGCGTGCCGCCCCGCACCTCACTTGCTTGCCTAGTGTTTCGTA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210655.2
CDS-3UTR GCA 90 bp CGAAACACTAGGCAAGCAAGTGAGGTGCGGGGCGGCACGCTGGCGCTGGCAGAGATGAGGGCATTGACGTaGTTCAGCACGGGCTTCAGG +
Preference number: 4 (lower is better)
Translates to: RNTRQASEVRGGTLALAEMRALT*FSTGFR
Trigger: CCTGAAGCCCGTGCTGAAGCACGTCAATGCCCTCAT...CTCTGCCAGCGCCAGCGTGCCGCCCCGCACCTCACTTGCTTGCCTAGTGTTTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210655.2
CDS-3UTR TCA 90 bp GTACGAAACACTAGGCAAGCAAGTGAGGTGCGGGGCGGCACGCTGGCGCTGGCAGACCACCAGACAAGTTaGTGCCCCGTTCCCCAATCT +
Preference number: 4 (lower is better)
Translates to: VRNTRQASEVRGGTLALADHQTS*CPVPQS
Trigger: AGATTGGGGAACGGGGCATCAACTTGTCTGGTGGTC...TGCCAGCGCCAGCGTGCCGCCCCGCACCTCACTTGCTTGCCTAGTGTTTCGTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000210655.2
CDS-3UTR TCA 90 bp GTACGAAACACTAGGCAAGCAAGTGAGGTGCGGGGCGGCACGCTGGCGCTGGCAAGCGTCCCCTCCCTCTaGATGGTGCCATCCTTCATA +
Preference number: 4 (lower is better)
Translates to: VRNTRQASEVRGGTLALASVPSL*MVPSFI
Trigger: TATGAAGGATGGCACCATTCAGAGGGAGGGGACGCT...TGCCAGCGCCAGCGTGCCGCCCCGCACCTCACTTGCTTGCCTAGTGTTTCGTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000210655.2
CDS-3UTR GCA 90 bp CGAAACACTAGGCAAGCAAGTGAGGTGCGGGGCGGCACGCTGGCGCTGGCAGAGTCAGGAGTGTGTGGATaGGCTTCACAGCCCCCAATT +
Preference number: 4 (lower is better)
Translates to: RNTRQASEVRGGTLALAESGVCG*ASQPPI
Trigger: AATTGGGGGCTGTGAAGCGCATCCACACACTCCTGA...CTCTGCCAGCGCCAGCGTGCCGCCCCGCACCTCACTTGCTTGCCTAGTGTTTCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000210655.2
CDS-3UTR CCA 90 bp GTACGAAACACTAGGCAAGCAAGTGAGGTGCGGGGCGGCACGCTGGCGCTGGCAGTTTTCAGGAGTGTGTaGATGCGCTTCACAGCCCCC +
Preference number: 4 (lower is better)
Translates to: VRNTRQASEVRGGTLALAVFRSV*MRFTAP
Trigger: GGGGGCTGTGAAGCGCATCCACACACTCCTGAAAAC...TGCCAGCGCCAGCGTGCCGCCCCGCACCTCACTTGCTTGCCTAGTGTTTCGTAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000210655.2
CDS-3UTR CCA 90 bp CGAAACACTAGGCAAGCAAGTGAGGTGCGGGGCGGCACGCTGGCGCTGGCAGAGAAGACGCTGTCCTTCTaGCTCAGAAGCTTCTCCGGT +
Preference number: 4 (lower is better)
Translates to: RNTRQASEVRGGTLALAEKTLSF*LRSFSG
Trigger: ACCGGAGAAGCTTCTGAGCCAGAAGGACAGCGTCTT...CTCTGCCAGCGCCAGCGTGCCGCCCCGCACCTCACTTGCTTGCCTAGTGTTTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000210655.2
ENSMUST00000210770.2
CDS-3UTR GCA 90 bp CGAAACACTAGGCAAGCAAGTGAGGTGCGGGGCGGCACGCTGGCGCTGGCAGAGTCCAGCTCTTGGTCTTaGCTGTTCATGAGGGTCTTC +
Preference number: 4 (lower is better)
Translates to: RNTRQASEVRGGTLALAESSSWS*LFMRVF
Trigger: GAAGACCCTCATGAACAGGCAAGACCAAGAGCTGGA...CTCTGCCAGCGCCAGCGTGCCGCCCCGCACCTCACTTGCTTGCCTAGTGTTTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210655.2
CDS-3UTR GCA 90 bp CGAAACACTAGGCAAGCAAGTGAGGTGCGGGGCGGCACGCTGGCGCTGGCAGAGCTCGACCTCGACCTCTaGTCTCCTGTCTTCTATTTC +
Preference number: 4 (lower is better)
Translates to: RNTRQASEVRGGTLALAELDLDL*SPVFYF
Trigger: GAAATAGAAGACAGGAGAGCAGAGGTCGAGGTCGAG...CTCTGCCAGCGCCAGCGTGCCGCCCCGCACCTCACTTGCTTGCCTAGTGTTTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209432.2
CDS-3UTR CCA 90 bp CGAAACACTAGGCAAGCAAGTGAGGTGCGGGGCGGCACGCTGGCGCTGGCAGAGCCAAGAAGACAACATTaGTGTGCTGGTAGAGGGCTC +
Preference number: 4 (lower is better)
Translates to: RNTRQASEVRGGTLALAEPRRQH*CAGRGL
Trigger: GAGCCCTCTACCAGCACACCAATGTTGTCTTCTTGG...CTCTGCCAGCGCCAGCGTGCCGCCCCGCACCTCACTTGCTTGCCTAGTGTTTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210655.2
CDS-3UTR CCA 90 bp TACGAAACACTAGGCAAGCAAGTGAGGTGCGGGGCGGCACGCTGGCGCTGGCAGACACTCCAGCGTGGATaGGATGTGCTGGTCAATGGT +
Preference number: 4 (lower is better)
Translates to: YETLGKQVRCGAARWRWQTLQRG*DVLVNG
Trigger: ACCATTGACCAGCACATCCCATCCACGCTGGAGTGT...CTGCCAGCGCCAGCGTGCCGCCCCGCACCTCACTTGCTTGCCTAGTGTTTCGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210655.2
CDS-3UTR CCA 90 bp TACGAAACACTAGGCAAGCAAGTGAGGTGCGGGGCGGCACGCTGGCGCTGGCAGAAGACGCTGTCCTTCTaGCTCAGAAGCTTCTCCGGT +
Preference number: 4 (lower is better)
Translates to: YETLGKQVRCGAARWRWQKTLSF*LRSFSG
Trigger: ACCGGAGAAGCTTCTGAGCCAGAAGGACAGCGTCTT...CTGCCAGCGCCAGCGTGCCGCCCCGCACCTCACTTGCTTGCCTAGTGTTTCGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000210655.2
ENSMUST00000210770.2
CDS-3UTR GCA 90 bp CGAAACACTAGGCAAGCAAGTGAGGTGCGGGGCGGCACGCTGGCGCTGGCAGAGATGAGGGTCTTCCAATaGTCAAAGAGCTGGCACTCA +
Preference number: 4 (lower is better)
Translates to: RNTRQASEVRGGTLALAEMRVFQ*SKSWHS
Trigger: TGAGTGCCAGCTCTTTGAGCATTGGAAGACCCTCAT...CTCTGCCAGCGCCAGCGTGCCGCCCCGCACCTCACTTGCTTGCCTAGTGTTTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210655.2
CDS-3UTR CCA 90 bp GTACGAAACACTAGGCAAGCAAGTGAGGTGCGGGGCGGCACGCTGGCGCTGGCAAGGTGGTCGCTCAGATaGACATCCAGAGCTGAGAAA +
Preference number: 4 (lower is better)
Translates to: VRNTRQASEVRGGTLALARWSLR*TSRAEK
Trigger: TTTCTCAGCTCTGGATGTCCATCTGAGCGACCACCT...TGCCAGCGCCAGCGTGCCGCCCCGCACCTCACTTGCTTGCCTAGTGTTTCGTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210655.2
CDS-3UTR CCA 90 bp TACGAAACACTAGGCAAGCAAGTGAGGTGCGGGGCGGCACGCTGGCGCTGGCAGAGGTACTGTAGCTTGTaGGTCACCAAGACCACTGTC +
Preference number: 4 (lower is better)
Translates to: YETLGKQVRCGAARWRWQRYCSL*VTKTTV
Trigger: GACAGTGGTCTTGGTGACCCACAAGCTACAGTACCT...CTGCCAGCGCCAGCGTGCCGCCCCGCACCTCACTTGCTTGCCTAGTGTTTCGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210655.2
CDS-3UTR CCA 90 bp CGAAACACTAGGCAAGCAAGTGAGGTGCGGGGCGGCACGCTGGCGCTGGCAGAGAATCTTCCCTTGGTCTaGCCAGTTCTTGGGGATCAA +
Preference number: 4 (lower is better)
Translates to: RNTRQASEVRGGTLALAENLPLV*PVLGDQ
Trigger: TTGATCCCCAAGAACTGGCCAGACCAAGGGAAGATT...CTCTGCCAGCGCCAGCGTGCCGCCCCGCACCTCACTTGCTTGCCTAGTGTTTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000210655.2
CDS-3UTR TCA 90 bp CCCAGCTGGCATGTACAAATGGAGGTGGCGGGATTCTGTCACCCTGTTGACTCACGAAGCAGCCGTTGTTaGGGACACCTTGGTCCACCC +
Preference number: 4 (lower is better)
Translates to: PSWHVQMEVAGFCHPVDSRSSRC*GHLGPP
Trigger: GGGTGGACCAAGGTGTCCTCAACAACGGCTGCTTCG...TGAGTCAACAGGGTGACAGAATCCCGCCACCTCCATTTGTACATGCCAGCTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210511.2
CDS-3UTR TCA 90 bp TCTGAAGACCAGGAGCCCAGCATCCAGCTGCAGACGAGCATCCTGCCTTGGAGGAGCCAGGTGCTATGGTaGATGTGTACCTTGGAGCTC +
Preference number: 4 (lower is better)
Translates to: SEDQEPSIQLQTSILPWRSQVLW*MCTLEL
Trigger: GAGCTCCAAGGTACACATTCACCATAGCACCTGGCT...CCTCCAAGGCAGGATGCTCGTCTGCAGCTGGATGCTGGGCTCCTGGTCTTCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210511.2
CDS-3UTR GCA 90 bp AGCCATGAAAGCCATCCCAGCTGGCATGTACAAATGGAGGTGGCGGGATTCTGTCCGAGTGGTTCTCGGTaGCGCAGAAGGCCAAGGGCA +
Preference number: 4 (lower is better)
Translates to: SHESHPSWHVQMEVAGFCPSGSR*RRRPRA
Trigger: TGCCCTTGGCCTTCTGCGGCACCGAGAACCACTCGG...ACAGAATCCCGCCACCTCCATTTGTACATGCCAGCTGGGATGGCTTTCATGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210511.2
CDS-3UTR TCA 90 bp TACGAAACACTAGGCAAGCAAGTGAGGTGCGGGGCGGCACGCTGGCGCTGGCAGGGAAGTATTTCTGGATaGAGTAGCACACCACAGCTA +
Preference number: 4 (lower is better)
Translates to: YETLGKQVRCGAARWRWQGSISG*SSTPQL
Trigger: TAGCTGTGGTGTGCTACTTCATCCAGAAATACTTCC...CTGCCAGCGCCAGCGTGCCGCCCCGCACCTCACTTGCTTGCCTAGTGTTTCGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210655.2
CDS-3UTR TCA 90 bp TTTACAAGTGATTTACAGTACGAAACACTAGGCAAGCAAGTGAGGTGCGGGGCGCGCGGTGCGCGATGGTaGCCACAGTGCGGTCTGCGA +
Preference number: 4 (lower is better)
Translates to: FTSDLQYETLGKQVRCGARGARW*PQCGLR
Trigger: TCGCAGACCGCACTGTGGTCACCATCGCGCACCGCG...CGCCCCGCACCTCACTTGCTTGCCTAGTGTTTCGTACTGTAAATCACTTGTAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210655.2
CDS-3UTR GCA 90 bp CGAAACACTAGGCAAGCAAGTGAGGTGCGGGGCGGCACGCTGGCGCTGGCAGAGACCATCTTGTACCTTTaGTTATTGAAGGGACTCTCG +
Preference number: 4 (lower is better)
Translates to: RNTRQASEVRGGTLALAETILYL*LLKGLS
Trigger: CGAGAGTCCCTTCAATAAGCAAAGGTACAAGATGGT...CTCTGCCAGCGCCAGCGTGCCGCCCCGCACCTCACTTGCTTGCCTAGTGTTTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210655.2
CDS-3UTR CCA 90 bp CTGCATGGCTTAGCCCCATGGCTCTGGGAACATGAAACAGCACAACCTTGGATTGGTCAGCCTCTGCAGTaGGCCCAAGAGGTCCCGAAC +
Preference number: 4 (lower is better)
Translates to: LHGLAPWLWEHETAQPWIGQPLQ*AQEVPN
Trigger: GTTCGGGACCTCTTGGGCCCACTGCAGAGGCTGACC...AATCCAAGGTTGTGCTGTTTCATGTTCCCAGAGCCATGGGGCTAAGCCATGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210110.2
CDS-3UTR CCA 90 bp AGCTGGCATGTACAAATGGAGGTGGCGGGATTCTGTCACCCTGTTGACTCAGGGGAGCAGGAAGACATGTaGCACTACGTTGAGCGCGTC +
Preference number: 4 (lower is better)
Translates to: SWHVQMEVAGFCHPVDSGEQEDM*HYVERV
Trigger: GACGCGCTCAACGTAGTGCCACATGTCTTCCTGCTC...CCCTGAGTCAACAGGGTGACAGAATCCCGCCACCTCCATTTGTACATGCCAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210511.2
CDS-3UTR CCA 90 bp GAGGTGATGGCAGCCATGAAAGCCATCCCAGCTGGCATGTACAAATGGAGGTGGTGTACCTTGGAGCTCTaGCTGCCCCATCCGATGAAG +
Preference number: 4 (lower is better)
Translates to: EVMAAMKAIPAGMYKWRWCTLEL*LPHPMK
Trigger: CTTCATCGGATGGGGCAGCCAGAGCTCCAAGGTACA...CCACCTCCATTTGTACATGCCAGCTGGGATGGCTTTCATGGCTGCCATCACCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210511.2
CDS-3UTR CCA 90 bp ATGTACAAATGGAGGTGGCGGGATTCTGTCACCCTGTTGACTCAGGGGTGTTGGATCCAGCGCAGGTTGTaGCCAGGGAAATGGAGCCAG +
Preference number: 4 (lower is better)
Translates to: MYKWRWRDSVTLLTQGCWIQRRL*PGKWSQ
Trigger: CTGGCTCCATTTCCCTGGCCACAACCTGCGCTGGAT...CCAACACCCCTGAGTCAACAGGGTGACAGAATCCCGCCACCTCCATTTGTACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210511.2
CDS-3UTR CCA 90 bp CATGGCTCTGGGAACATGAAACAGCACAACCTTGGATTCGCACTTAGCACTCTCGCATCTCCCCCAGGGTaGCCAGAAGGAGCGAGGACT +
Preference number: 4 (lower is better)
Translates to: HGSGNMKQHNLGFALSTLASPPG*PEGART
Trigger: AGTCCTCGCTCCTTCTGGCCACCCTGGGGGAGATGC...GAGAGTGCTAAGTGCGAATCCAAGGTTGTGCTGTTTCATGTTCCCAGAGCCATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000210110.2
3UTR CAA 72 bp ATGTACAAATGGAGGTGGCGGGATTCTGTCACCCTGTaGACTCAGGGGTGTTGGTCTGAAGACCAGGAGCCC +
Preference number: 4 (lower is better)
Translates to: MYKWRWRDSVTL*TQGCWSEDQEP
Trigger: GGGCTCCTGGTCTTCAGACCAACACCCCTGAGTCAACAGGGTGACAGAATCCCGCCACCTCCATTTGTACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210511.2
3UTR CAA 72 bp AAGACGCTGTCCTTCTGGCTCAGAAGCTTCTCCGGTTaGTCAAACTCCAGGATGGCTCCCCTCTTCAGGACC +
Preference number: 4 (lower is better)
Translates to: KTLSFWLRSFSG*SNSRMAPLFRT
Trigger: GGTCCTGAAGAGGGGAGCCATCCTGGAGTTTGACAAACCGGAGAAGCTTCTGAGCCAGAAGGACAGCGTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209432.2
CDS-3UTR TCA 90 bp TTTACAAGTGATTTACAGTACGAAACACTAGGCAAGCAAGTGAGGTGCGGGGCGGATGATGGAGAGGCGTaGACGGAGCGTGTGCAGCGG +
Preference number: 4 (lower is better)
Translates to: FTSDLQYETLGKQVRCGADDGEA*TERVQR
Trigger: CCGCTGCACACGCTCCGTTCACGCCTCTCCATCATC...CGCCCCGCACCTCACTTGCTTGCCTAGTGTTTCGTACTGTAAATCACTTGTAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210655.2
CDS-3UTR GCA 90 bp CATGGCTCTGGGAACATGAAACAGCACAACCTTGGATTCGCACTTAGCACTCTCTTGCCGCAGCCCACCTaGCCCACAATCATGGTCAGC +
Preference number: 4 (lower is better)
Translates to: HGSGNMKQHNLGFALSTLLPQPT*PTIMVS
Trigger: GCTGACCATGATTGTGGGGCAGGTGGGCTGCGGCAA...GAGAGTGCTAAGTGCGAATCCAAGGTTGTGCTGTTTCATGTTCCCAGAGCCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210110.2
CDS-3UTR GCA 90 bp GGTTCTTTTATTCTCCCCTCTGCAAACCATAGTTTGCCTTCATCAGAACTGCATGCCCCGGAGACCCTCTaGATCTCCCCCAGGGTGGCC +
Preference number: 4 (lower is better)
Translates to: GSFILPSANHSLPSSELHAPETL*ISPRVA
Trigger: GGCCACCCTGGGGGAGATGCAGAGGGTCTCCGGGGC...ATGCAGTTCTGATGAAGGCAAACTATGGTTTGCAGAGGGGAGAATAAAAGAACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000210110.2
CDS-3UTR GCA 90 bp TTTACAAGTGATTTACAGTACGAAACACTAGGCAAGCAAGTGAGGTGCGGGGCGGTGTCATCCAGCTGCTaGAGGTCCCTGGACGCCACT +
Preference number: 4 (lower is better)
Translates to: FTSDLQYETLGKQVRCGAVSSSC*RSLDAT
Trigger: AGTGGCGTCCAGGGACCTGCAGCAGCTGGATGACAC...CGCCCCGCACCTCACTTGCTTGCCTAGTGTTTCGTACTGTAAATCACTTGTAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210655.2
CDS-3UTR CCA 90 bp TTTATTCTCCCCTCTGCAAACCATAGTTTGCCTTCATCAGAACTGCATGGCTTATTGCCCGCTTGGCCTTaGGGTGCAGGCTCTCGGGGG +
Preference number: 4 (lower is better)
Translates to: FILPSANHSLPSSELHGLLPAWP*GAGSRG
Trigger: CCCCCGAGAGCCTGCACCCCAAGGCCAAGCGGGCAA...TAAGCCATGCAGTTCTGATGAAGGCAAACTATGGTTTGCAGAGGGGAGAATAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210110.2
CDS-3UTR CCA 90 bp TTTACAAGTGATTTACAGTACGAAACACTAGGCAAGCAAGTGAGGTGCGGGGCGTGCGGTGCAGCCTCTTaGCCACCTTCAGTCCTGTCC +
Preference number: 4 (lower is better)
Translates to: FTSDLQYETLGKQVRCGACGAAS*PPSVLS
Trigger: GGACAGGACTGAAGGTGGCCAAGAGGCTGCACCGCA...CGCCCCGCACCTCACTTGCTTGCCTAGTGTTTCGTACTGTAAATCACTTGTAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210655.2
CDS-3UTR CCA 90 bp TTTACAAGTGATTTACAGTACGAAACACTAGGCAAGCAAGTGAGGTGCGGGGCGACCACCAGCTTCAGCTaGGCGATCTCCAGAGCCTCC +
Preference number: 4 (lower is better)
Translates to: FTSDLQYETLGKQVRCGATTSFS*AISRAS
Trigger: GGAGGCTCTGGAGATCGCCCAGCTGAAGCTGGTGGT...CGCCCCGCACCTCACTTGCTTGCCTAGTGTTTCGTACTGTAAATCACTTGTAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000210655.2
ENSMUST00000210770.2
CDS-3UTR GCA 90 bp GAGGTGATGGCAGCCATGAAAGCCATCCCAGCTGGCATGTACAAATGGAGGTGGGGAAATGGAGCCAGGTaGTATGGTGAATGTGTACCT +
Preference number: 4 (lower is better)
Translates to: EVMAAMKAIPAGMYKWRWGNGAR*YGECVP
Trigger: AGGTACACATTCACCATAGCACCTGGCTCCATTTCC...CCACCTCCATTTGTACATGCCAGCTGGGATGGCTTTCATGGCTGCCATCACCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210511.2
CDS-3UTR CCA 90 bp TTTACAAGTGATTTACAGTACGAAACACTAGGCAAGCAAGTGAGGTGCGGGGCGGCTGCTGCAGGTCCCTaGACGCCACTCGGAAGTATT +
Preference number: 4 (lower is better)
Translates to: FTSDLQYETLGKQVRCGAAAAGP*TPLGSI
Trigger: AATACTTCCGAGTGGCGTCCAGGGACCTGCAGCAGC...CGCCCCGCACCTCACTTGCTTGCCTAGTGTTTCGTACTGTAAATCACTTGTAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210655.2
CDS-3UTR TCA 90 bp TTTACAAGTGATTTACAGTACGAAACACTAGGCAAGCAAGTGAGGTGCGGGGCGGGTTTCAGCAAAGTGTaGGAGCAGAGGGAGCTGCGT +
Preference number: 4 (lower is better)
Translates to: FTSDLQYETLGKQVRCGAGFSKV*EQRELR
Trigger: ACGCAGCTCCCTCTGCTCTCACACTTTGCTGAAACC...CGCCCCGCACCTCACTTGCTTGCCTAGTGTTTCGTACTGTAAATCACTTGTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210655.2
CDS-3UTR GCA 90 bp TTATTTACAAGTGATTTACAGTACGAAACACTAGGCAAGCAAGTGAGGTGCGGGAGGAGGACTTCCCACTaGCTGTGCGGCCGCAGATCC +
Preference number: 4 (lower is better)
Translates to: LFTSDLQYETLGKQVRCGRRTSH*LCGRRS
Trigger: GGATCTGCGGCCGCACAGGCAGTGGGAAGTCCTCCT...CCCGCACCTCACTTGCTTGCCTAGTGTTTCGTACTGTAAATCACTTGTAAATAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210655.2
CDS-3UTR CCA 90 bp CATGGCTCTGGGAACATGAAACAGCACAACCTTGGATTCGCACTTAGCACTCTCCACGGATCTCTGCACTaGACAGGAACTCACTCAGCT +
Preference number: 4 (lower is better)
Translates to: HGSGNMKQHNLGFALSTLHGSLH*TGTHSA
Trigger: AGCTGAGTGAGTTCCTGTCCAGTGCAGAGATCCGTG...GAGAGTGCTAAGTGCGAATCCAAGGTTGTGCTGTTTCATGTTCCCAGAGCCATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210110.2
CDS-3UTR CCA 90 bp CTTTTATTCTCCCCTCTGCAAACCATAGTTTGCCTTCATCAGAACTGCATGGCTTGGTACTTGCCCGCTTaGCCTTGGGGTGCAGGCTCT +
Preference number: 4 (lower is better)
Translates to: LLFSPLQTIVCLHQNCMAWYLPA*PWGAGS
Trigger: AGAGCCTGCACCCCAAGGCCAAGCGGGCAAGTACCA...AGCCATGCAGTTCTGATGAAGGCAAACTATGGTTTGCAGAGGGGAGAATAAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000210110.2
CDS-3UTR CCA 90 bp AAGGTTCTTTTATTCTCCCCTCTGCAAACCATAGTTTGCCTTCATCAGAACTGCCCTGCCCCACAATCATaGTCAGCTGGCCTCGGGGGA +
Preference number: 4 (lower is better)
Translates to: KVLLFSPLQTIVCLHQNCPAPQS*SAGLGG
Trigger: TCCCCCGAGGCCAGCTGACCATGATTGTGGGGCAGG...GCAGTTCTGATGAAGGCAAACTATGGTTTGCAGAGGGGAGAATAAAAGAACCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000210110.2
CDS-3UTR CCA 90 bp TTTACAAGTGATTTACAGTACGAAACACTAGGCAAGCAAGTGAGGTGCGGGGCGTGTGCAGCGGCAGCTTaGCGATGTCGATGCCATCAA +
Preference number: 4 (lower is better)
Translates to: FTSDLQYETLGKQVRCGACAAAA*RCRCHQ
Trigger: TTGATGGCATCGACATCGCCAAGCTGCCGCTGCACA...CGCCCCGCACCTCACTTGCTTGCCTAGTGTTTCGTACTGTAAATCACTTGTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210655.2
CDS-3UTR TCA 90 bp TTTACAAGTGATTTACAGTACGAAACACTAGGCAAGCAAGTGAGGTGCGGGGCGCCAGAGTGTGCTGTCTaGGCATTTCTTCTCTGGGTC +
Preference number: 4 (lower is better)
Translates to: FTSDLQYETLGKQVRCGAPECAV*AFLLWV
Trigger: GACCCAGAGAAGAAATGCTCAGACAGCACACTCTGG...CGCCCCGCACCTCACTTGCTTGCCTAGTGTTTCGTACTGTAAATCACTTGTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000210655.2
ENSMUST00000210770.2
CDS-3UTR GCA 90 bp CTTTTATTCTCCCCTCTGCAAACCATAGTTTGCCTTCATCAGAACTGCATGGCTCAGCATCTCCATCCATaGTGGGGGTCAGCCTCTGCA +
Preference number: 4 (lower is better)
Translates to: LLFSPLQTIVCLHQNCMAQHLHP*WGSASA
Trigger: TGCAGAGGCTGACCCCCAGCATGGATGGAGATGCTG...AGCCATGCAGTTCTGATGAAGGCAAACTATGGTTTGCAGAGGGGAGAATAAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000210110.2
CDS-3UTR GCA 90 bp TTATTTACAAGTGATTTACAGTACGAAACACTAGGCAAGCAAGTGAGGTGCGGGCAGGCCTCCTGGCAGTaGCTTCACCACCAGCTTCAG +
Preference number: 4 (lower is better)
Translates to: LFTSDLQYETLGKQVRCGQASWQ*LHHQLQ
Trigger: CTGAAGCTGGTGGTGAAGGCACTGCCAGGAGGCCTG...CCCGCACCTCACTTGCTTGCCTAGTGTTTCGTACTGTAAATCACTTGTAAATAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000210655.2
ENSMUST00000210770.2
CDS-3UTR GCA 90 bp TTTACAAGTGATTTACAGTACGAAACACTAGGCAAGCAAGTGAGGTGCGGGGCGGACCATCACGAGGTCTaGACTCAGGATGGTGTGTAC +
Preference number: 4 (lower is better)
Translates to: FTSDLQYETLGKQVRCGADHHEV*TQDGVY
Trigger: GTACACACCATCCTGAGTGCAGACCTCGTGATGGTC...CGCCCCGCACCTCACTTGCTTGCCTAGTGTTTCGTACTGTAAATCACTTGTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000210655.2
ENSMUST00000210770.2
CDS-3UTR CCA 90 bp AAGGTTCTTTTATTCTCCCCTCTGCAAACCATAGTTTGCCTTCATCAGAACTGCAACCTCTTCCCGGGCTaGGCGCTTGCGGTTCACAAC +
Preference number: 4 (lower is better)
Translates to: KVLLFSPLQTIVCLHQNCNLFPG*ALAVHN
Trigger: GTTGTGAACCGCAAGCGCCCAGCCCGGGAAGAGGTT...GCAGTTCTGATGAAGGCAAACTATGGTTTGCAGAGGGGAGAATAAAAGAACCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000210110.2
CDS-3UTR CCA 90 bp TTTACAAGTGATTTACAGTACGAAACACTAGGCAAGCAAGTGAGGTGCGGGGCGTCAGACACTCCAGCGTaGATGGGATGTGCTGGTCAA +
Preference number: 4 (lower is better)
Translates to: FTSDLQYETLGKQVRCGASDTPA*MGCAGQ
Trigger: TTGACCAGCACATCCCATCCACGCTGGAGTGTCTGA...CGCCCCGCACCTCACTTGCTTGCCTAGTGTTTCGTACTGTAAATCACTTGTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210655.2
CDS-3UTR CCA 90 bp TTTACAAGTGATTTACAGTACGAAACACTAGGCAAGCAAGTGAGGTGCGGGGCGTTCACAGCCCCCAATTaGATCTCCATGTCTGCCAGG +
Preference number: 4 (lower is better)
Translates to: FTSDLQYETLGKQVRCGAFTAPN*ISMSAR
Trigger: CCTGGCAGACATGGAGATCCAATTGGGGGCTGTGAA...CGCCCCGCACCTCACTTGCTTGCCTAGTGTTTCGTACTGTAAATCACTTGTAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000210655.2
CDS-3UTR CCA 90 bp TTATTTACAAGTGATTTACAGTACGAAACACTAGGCAAGCAAGTGAGGTGCGGGTGCTGTCTCCCGCTCTaGGTTGCTGGGGTCTTCTCC +
Preference number: 4 (lower is better)
Translates to: LFTSDLQYETLGKQVRCGCCLPL*VAGVFS
Trigger: GGAGAAGACCCCAGCAACCCAGAGCGGGAGACAGCA...CCCGCACCTCACTTGCTTGCCTAGTGTTTCGTACTGTAAATCACTTGTAAATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210655.2
CDS-3UTR GCA 90 bp TTTACAAGTGATTTACAGTACGAAACACTAGGCAAGCAAGTGAGGTGCGGGGCGGATGAGTACCACGCATaGTCCAATGTACTCCATGCG +
Preference number: 4 (lower is better)
Translates to: FTSDLQYETLGKQVRCGADEYHA*SNVLHA
Trigger: CGCATGGAGTACATTGGAGCATGCGTGGTACTCATC...CGCCCCGCACCTCACTTGCTTGCCTAGTGTTTCGTACTGTAAATCACTTGTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210655.2
CDS-3UTR GCA 90 bp TTATTTACAAGTGATTTACAGTACGAAACACTAGGCAAGCAAGTGAGGTGCGGGGACCACAGTGCGGTCTaGGAAGGCTGTCATCACCAC +
Preference number: 4 (lower is better)
Translates to: LFTSDLQYETLGKQVRCGDHSAV*EGCHHH
Trigger: GTGGTGATGACAGCCTTCGCAGACCGCACTGTGGTC...CCCGCACCTCACTTGCTTGCCTAGTGTTTCGTACTGTAAATCACTTGTAAATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000209432.2
ENSMUST00000210655.2
CDS-3UTR GCA 90 bp TCTTTATTTACAAGTGATTTACAGTACGAAACACTAGGCAAGCAAGTGAGGTGCTCTCCCGCTCTGGGTTaGTGGGGTCTTCTCCCTCGC +
Preference number: 4 (lower is better)
Translates to: SLFTSDLQYETLGKQVRCSPALG*WGLLPR
Trigger: GCGAGGGAGAAGACCCCAGCAACCCAGAGCGGGAGA...GCACCTCACTTGCTTGCCTAGTGTTTCGTACTGTAAATCACTTGTAAATAAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210655.2
CDS-3UTR CCA 90 bp GGTTCTTTTATTCTCCCCTCTGCAAACCATAGTTTGCCTTCATCAGAACTGCATCATCTCCATCCATGCTaGGGGTCAGCCTCTGCAGTG +
Preference number: 4 (lower is better)
Translates to: GSFILPSANHSLPSSELHHLHPC*GSASAV
Trigger: CACTGCAGAGGCTGACCCCCAGCATGGATGGAGATG...ATGCAGTTCTGATGAAGGCAAACTATGGTTTGCAGAGGGGAGAATAAAAGAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000210110.2
CDS-3UTR CCA 90 bp CATGGCTCTGGGAACATGAAACAGCACAACCTTGGATTCGCACTTAGCACTCTCAAGCCTCCGATGATCTaGACACAGAAGTTGTCAGCA +
Preference number: 4 (lower is better)
Translates to: HGSGNMKQHNLGFALSTLKPPMI*TQKLSA
Trigger: TGCTGACAACTTCTGTGTCCAGATCATCGGAGGCTT...GAGAGTGCTAAGTGCGAATCCAAGGTTGTGCTGTTTCATGTTCCCAGAGCCATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210110.2
CDS-3UTR CCA 90 bp TCTTTATTTACAAGTGATTTACAGTACGAAACACTAGGCAAGCAAGTGAGGTGCCCTGCCCCACAATCATaGTCAGCTGGCCTCGGGGGA +
Preference number: 4 (lower is better)
Translates to: SLFTSDLQYETLGKQVRCPAPQS*SAGLGG
Trigger: TCCCCCGAGGCCAGCTGACCATGATTGTGGGGCAGG...GCACCTCACTTGCTTGCCTAGTGTTTCGTACTGTAAATCACTTGTAAATAAAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000210655.2
CDS-3UTR CCA 90 bp TTATTTACAAGTGATTTACAGTACGAAACACTAGGCAAGCAAGTGAGGTGCGGGCCCGATCTTCTGTCCTaGGGCGATGAGGGCATTGAC +
Preference number: 4 (lower is better)
Translates to: LFTSDLQYETLGKQVRCGPDLLS*GDEGID
Trigger: GTCAATGCCCTCATCGCCCCAGGACAGAAGATCGGG...CCCGCACCTCACTTGCTTGCCTAGTGTTTCGTACTGTAAATCACTTGTAAATAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210655.2
CDS-3UTR CCA 90 bp TCTTTATTTACAAGTGATTTACAGTACGAAACACTAGGCAAGCAAGTGAGGTGCGGCATCCAGGCCTCCTaGCAGTGCCTTCACCACCAG +
Preference number: 4 (lower is better)
Translates to: SLFTSDLQYETLGKQVRCGIQAS*QCLHHQ
Trigger: CTGGTGGTGAAGGCACTGCCAGGAGGCCTGGATGCC...GCACCTCACTTGCTTGCCTAGTGTTTCGTACTGTAAATCACTTGTAAATAAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000210655.2
ENSMUST00000210770.2
CDS-3UTR TCA 90 bp TTATTTACAAGTGATTTACAGTACGAAACACTAGGCAAGCAAGTGAGGTGCGGGGGCTGCAGAGCACGGTaGATACCATGGCATAGACAG +
Preference number: 4 (lower is better)
Translates to: LFTSDLQYETLGKQVRCGGCRAR*IPWHRQ
Trigger: CTGTCTATGCCATGGTATTCACCGTGCTCTGCAGCC...CCCGCACCTCACTTGCTTGCCTAGTGTTTCGTACTGTAAATCACTTGTAAATAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000210655.2
CDS-3UTR TCA 90 bp TCTTTATTTACAAGTGATTTACAGTACGAAACACTAGGCAAGCAAGTGAGGTGCAGGGACTCTCGAAGGTaGTGTTCTCCTCCACCGTGG +
Preference number: 4 (lower is better)
Translates to: SLFTSDLQYETLGKQVRCRDSRR*CSPPPW
Trigger: CCACGGTGGAGGAGAACATCACCTTCGAGAGTCCCT...GCACCTCACTTGCTTGCCTAGTGTTTCGTACTGTAAATCACTTGTAAATAAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210655.2
CDS-3UTR TCA 90 bp TTATTTACAAGTGATTTACAGTACGAAACACTAGGCAAGCAAGTGAGGTGCGGGCCAGAGTGTGCTGTCTaGGCATTTCTTCTCTGGGTC +
Preference number: 4 (lower is better)
Translates to: LFTSDLQYETLGKQVRCGPECAV*AFLLWV
Trigger: GACCCAGAGAAGAAATGCTCAGACAGCACACTCTGG...CCCGCACCTCACTTGCTTGCCTAGTGTTTCGTACTGTAAATCACTTGTAAATAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000210655.2
ENSMUST00000210770.2
CDS-3UTR GCA 90 bp TTATTTACAAGTGATTTACAGTACGAAACACTAGGCAAGCAAGTGAGGTGCGGGATGTCTATGTCTGGCTaGAGGGAGCAGGCTTCGATG +
Preference number: 4 (lower is better)
Translates to: LFTSDLQYETLGKQVRCGMSMSG*REQASM
Trigger: CATCGAAGCCTGCTCCCTGCAGCCAGACATAGACAT...CCCGCACCTCACTTGCTTGCCTAGTGTTTCGTACTGTAAATCACTTGTAAATAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210655.2
CDS-3UTR GCA 90 bp TTATTTACAAGTGATTTACAGTACGAAACACTAGGCAAGCAAGTGAGGTGCGGGGCCACCAAGACCATGTaGTTGAGTAGCTGGGAGAAG +
Preference number: 4 (lower is better)
Translates to: LFTSDLQYETLGKQVRCGATKTM*LSSWEK
Trigger: CTTCTCCCAGCTACTCAAGCACATGGTCTTGGTGGC...CCCGCACCTCACTTGCTTGCCTAGTGTTTCGTACTGTAAATCACTTGTAAATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210655.2
CDS-3UTR GCA 90 bp TCTTTATTTACAAGTGATTTACAGTACGAAACACTAGGCAAGCAAGTGAGGTGCTACTCCAGGAGCTTCTaGTGGAACCGGGCCTCGTAC +
Preference number: 4 (lower is better)
Translates to: SLFTSDLQYETLGKQVRCYSRSF*WNRASY
Trigger: GTACGAGGCCCGGTTCCAGCAGAAGCTCCTGGAGTA...GCACCTCACTTGCTTGCCTAGTGTTTCGTACTGTAAATCACTTGTAAATAAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210655.2
CDS-3UTR GCA 90 bp TTATTTACAAGTGATTTACAGTACGAAACACTAGGCAAGCAAGTGAGGTGCGGGGACCATCACGAGGTCTaGACTCAGGATGGTGTGTAC +
Preference number: 4 (lower is better)
Translates to: LFTSDLQYETLGKQVRCGDHHEV*TQDGVY
Trigger: GTACACACCATCCTGAGTGCAGACCTCGTGATGGTC...CCCGCACCTCACTTGCTTGCCTAGTGTTTCGTACTGTAAATCACTTGTAAATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000210655.2
ENSMUST00000210770.2
CDS-3UTR TCA 90 bp TCTTTATTTACAAGTGATTTACAGTACGAAACACTAGGCAAGCAAGTGAGGTGCGGGCTTTCCTCTCCATaGCTGTCTCCTTCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: SLFTSDLQYETLGKQVRCGLSSP*LSPSPA
Trigger: AGCTGGAGAAGGAGACAGTCATGGAGAGGAAAGCCC...GCACCTCACTTGCTTGCCTAGTGTTTCGTACTGTAAATCACTTGTAAATAAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210655.2
CDS-3UTR TCA 90 bp TTATTTACAAGTGATTTACAGTACGAAACACTAGGCAAGCAAGTGAGGTGCGGGTCCTCACCATCCAGTTaGGGTAGTTGGAGACCATCA +
Preference number: 4 (lower is better)
Translates to: LFTSDLQYETLGKQVRCGSSPSS*GSWRPS
Trigger: TGATGGTCTCCAACTACCTCAACTGGATGGTGAGGA...CCCGCACCTCACTTGCTTGCCTAGTGTTTCGTACTGTAAATCACTTGTAAATAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210655.2
CDS-3UTR GCA 90 bp TCTTTATTTACAAGTGATTTACAGTACGAAACACTAGGCAAGCAAGTGAGGTGCCCATGGTTTCTGAGATaGGTAGGCTACGGGGCCTCT +
Preference number: 4 (lower is better)
Translates to: SLFTSDLQYETLGKQVRCPWFLR*VGYGAS
Trigger: AGAGGCCCCGTAGCCTACGCATCTCAGAAACCATGG...GCACCTCACTTGCTTGCCTAGTGTTTCGTACTGTAAATCACTTGTAAATAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210655.2
CDS-3UTR GCA 90 bp TCTTTATTTACAAGTGATTTACAGTACGAAACACTAGGCAAGCAAGTGAGGTGCGGTGACAAGGCACAGTaGAATTCCCAGGCTGCAGAG +
Preference number: 4 (lower is better)
Translates to: SLFTSDLQYETLGKQVRCGDKAQ*NSQAAE
Trigger: CTCTGCAGCCTGGGAATTGCACTGTGCCTTGTCACC...GCACCTCACTTGCTTGCCTAGTGTTTCGTACTGTAAATCACTTGTAAATAAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210655.2
CDS-3UTR CCA 90 bp TTATTTACAAGTGATTTACAGTACGAAACACTAGGCAAGCAAGTGAGGTGCGGGCCAGCCAGTAATCAATaGCCACCAAGACCATGTGCT +
Preference number: 4 (lower is better)
Translates to: LFTSDLQYETLGKQVRCGPASNQ*PPRPCA
Trigger: AGCACATGGTCTTGGTGGCCATTGATTACTGGCTGG...CCCGCACCTCACTTGCTTGCCTAGTGTTTCGTACTGTAAATCACTTGTAAATAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210655.2
CDS-3UTR TCA 90 bp TCTTTATTTACAAGTGATTTACAGTACGAAACACTAGGCAAGCAAGTGAGGTGCGGGAGCAGGCTTCGATaGCCATCTTGTACCTTTGCT +
Preference number: 4 (lower is better)
Translates to: SLFTSDLQYETLGKQVRCGSRLR*PSCTFA
Trigger: AGCAAAGGTACAAGATGGTCATCGAAGCCTGCTCCC...GCACCTCACTTGCTTGCCTAGTGTTTCGTACTGTAAATCACTTGTAAATAAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210655.2
CDS-3UTR CCA 90 bp TCTTTATTTACAAGTGATTTACAGTACGAAACACTAGGCAAGCAAGTGAGGTGCCACTGTCCGTCCACTTaGCCAGCCAGTAATCAATGG +
Preference number: 4 (lower is better)
Translates to: SLFTSDLQYETLGKQVRCHCPST*PASNQW
Trigger: CCATTGATTACTGGCTGGCCAAGTGGACGGACAGTG...GCACCTCACTTGCTTGCCTAGTGTTTCGTACTGTAAATCACTTGTAAATAAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210655.2
CDS-3UTR CCA 90 bp TCTTTATTTACAAGTGATTTACAGTACGAAACACTAGGCAAGCAAGTGAGGTGCGGTCTGGCCAGTTCTTaGGGATCAATGACGGTGCTA +
Preference number: 4 (lower is better)
Translates to: SLFTSDLQYETLGKQVRCGLASS*GSMTVL
Trigger: TAGCACCGTCATTGATCCCCAAGAACTGGCCAGACC...GCACCTCACTTGCTTGCCTAGTGTTTCGTACTGTAAATCACTTGTAAATAAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210655.2
CDS-3UTR TCA 90 bp TCTTTATTTACAAGTGATTTACAGTACGAAACACTAGGCAAGCAAGTGAGGTGCATGATCCAGTCTGCATaGGGCAGGTACTGTAGCTTG +
Preference number: 4 (lower is better)
Translates to: SLFTSDLQYETLGKQVRCMIQSA*GRYCSL
Trigger: CAAGCTACAGTACCTGCCTCATGCAGACTGGATCAT...GCACCTCACTTGCTTGCCTAGTGTTTCGTACTGTAAATCACTTGTAAATAAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210655.2
CDS-3UTR TCA 90 bp TCTTTATTTACAAGTGATTTACAGTACGAAACACTAGGCAAGCAAGTGAGGTGCCCAAGACCATGTGCTTaGGTAGCTGGGAGAAGACAA +
Preference number: 4 (lower is better)
Translates to: SLFTSDLQYETLGKQVRCPRPCA*VAGRRQ
Trigger: TTGTCTTCTCCCAGCTACTCAAGCACATGGTCTTGG...GCACCTCACTTGCTTGCCTAGTGTTTCGTACTGTAAATCACTTGTAAATAAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210655.2
CDS-3UTR CCA 90 bp TCTTTATTTACAAGTGATTTACAGTACGAAACACTAGGCAAGCAAGTGAGGTGCTGTTCTCCTCCACCGTaGCATTTAGCAGCCATGGTT +
Preference number: 4 (lower is better)
Translates to: SLFTSDLQYETLGKQVRCCSPPP*HLAAMV
Trigger: AACCATGGCTGCTAAATGCCACGGTGGAGGAGAACA...GCACCTCACTTGCTTGCCTAGTGTTTCGTACTGTAAATCACTTGTAAATAAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210655.2
CDS-3UTR CCA 90 bp TCTTTATTTACAAGTGATTTACAGTACGAAACACTAGGCAAGCAAGTGAGGTGCCAATGCTCAAAGAGCTaGCACTCAGACCTCTGGAAG +
Preference number: 4 (lower is better)
Translates to: SLFTSDLQYETLGKQVRCQCSKS*HSDLWK
Trigger: CTTCCAGAGGTCTGAGTGCCAGCTCTTTGAGCATTG...GCACCTCACTTGCTTGCCTAGTGTTTCGTACTGTAAATCACTTGTAAATAAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210655.2
CDS-3UTR TCA 90 bp TCTTTATTTACAAGTGATTTACAGTACGAAACACTAGGCAAGCAAGTGAGGTGCATGGACATCCAGAGCTaGGAAAGGGTCATCCAAGAA +
Preference number: 4 (lower is better)
Translates to: SLFTSDLQYETLGKQVRCMDIQS*ERVIQE
Trigger: TTCTTGGATGACCCTTTCTCAGCTCTGGATGTCCAT...GCACCTCACTTGCTTGCCTAGTGTTTCGTACTGTAAATCACTTGTAAATAAAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210655.2
CDS-3UTR CCA 90 bp TCTTTATTTACAAGTGATTTACAGTACGAAACACTAGGCAAGCAAGTGAGGTGCAAGCCTCCGATGATCTaGACACAGAAGTTGTCAGCA +
Preference number: 4 (lower is better)
Translates to: SLFTSDLQYETLGKQVRCKPPMI*TQKLSA
Trigger: TGCTGACAACTTCTGTGTCCAGATCATCGGAGGCTT...GCACCTCACTTGCTTGCCTAGTGTTTCGTACTGTAAATCACTTGTAAATAAAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210655.2
CDS GCA 90 bp GCATGGCAGAGAGCCCTCCAGATGGCCCGGGCGCCCTGCTGGCTCTaGGTGTCTTTCCGCGCCTGGGCATCGAAGGCCGCGCAGAGTCGC +
Preference number: 5 (lower is better)
Translates to: AWQRALQMARAPCWL*VSFRAWASKAAQSR
Trigger: GCGACTCTGCGCGGCCTTCGATGCCCAGGCGCGGAAAGACACGCAGAGCCAGCAGGGCGCCCGGGCCATCTGGAGGGCTCTCTGCCATGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033123.8
CDS GCA 90 bp CTCCCAAAGGCATGGCAGAGAGCCCTCCAGATGGCCCGGGCGCCCTaGTGGCTCTGCGTGTCTTTCCGCGCCTGGGCATCGAAGGCCGCG +
Preference number: 5 (lower is better)
Translates to: LPKAWQRALQMARAP*WLCVSFRAWASKAA
Trigger: CGCGGCCTTCGATGCCCAGGCGCGGAAAGACACGCAGAGCCAGCAGGGCGCCCGGGCCATCTGGAGGGCTCTCTGCCATGCCTTTGGGAG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033123.8
CDS TCA 90 bp TCCGCGCCTGGGCATCGAAGGCCGCGCAGAGTCGCTGATAGTTGGTaGGGGCTCTCATGGCGATGGGCAGCTTCCCGATGGCCCGCAGGT +
Preference number: 5 (lower is better)
Translates to: SAPGHRRPRRVADSW*GLSWRWAASRWPAG
Trigger: ACCTGCGGGCCATCGGGAAGCTGCCCATCGCCATGAGAGCCCTCACCAACTATCAGCGACTCTGCGCGGCCTTCGATGCCCAGGCGCGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033123.8
CDS GCA 90 bp CTGTCTGGAAGGCTGCTGTTCCAGAAGACGGCCCCGGAGACCCTCTaGATCTCCCCCAGGGTGGCCAGAAGGAGCGAGGACTTGCCGCAG +
Preference number: 5 (lower is better)
Translates to: LSGRLLFQKTAPETL*ISPRVARRSEDLPQ
Trigger: CTGCGGCAAGTCCTCGCTCCTTCTGGCCACCCTGGGGGAGATGCAGAGGGTCTCCGGGGCCGTCTTCTGGAACAGCAGCCTTCCAGACAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000033123.8
ENSMUST00000210110.2
ENSMUST00000210655.2
CDS GCA 90 bp AGATGCGTAGGCTACGGGGCCTCTGCTCCTGGCATCCGAGTCGGCTaGTGTCTCCCGCTCTGGGTTGCTGGGGTCTTCTCCCTCGCTGTC +
Preference number: 5 (lower is better)
Translates to: RCVGYGASAPGIRVG*CLPLWVAGVFSLAV
Trigger: GACAGCGAGGGAGAAGACCCCAGCAACCCAGAGCGGGAGACAGCAGCCGACTCGGATGCCAGGAGCAGAGGCCCCGTAGCCTACGCATCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000210655.2
CDS CCA 90 bp AGGATACGGAATGTGCTGCTGAGGACCAGGCGTCTCCCAAAGGCATaGCAGAGAGCCCTCCAGATGGCCCGGGCGCCCTGCTGGCTCTGC +
Preference number: 5 (lower is better)
Translates to: RIRNVLLRTRRLPKA*QRALQMARAPCWLC
Trigger: GCAGAGCCAGCAGGGCGCCCGGGCCATCTGGAGGGCTCTCTGCCATGCCTTTGGGAGACGCCTGGTCCTCAGCAGCACATTCCGTATCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033123.8
CDS CCA 90 bp CAGCCTCTGCAGTGGGCCCAAGAGGTCCCGAACCTCTTCCCGGGCTaGGCGCTTGCGGTTCACAACCTTGAGGGGCACCGCCTGGTACTT +
Preference number: 5 (lower is better)
Translates to: QPLQWAQEVPNLFPG*ALAVHNLEGHRLVL
Trigger: AAGTACCAGGCGGTGCCCCTCAAGGTTGTGAACCGCAAGCGCCCAGCCCGGGAAGAGGTTCGGGACCTCTTGGGCCCACTGCAGAGGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033123.8
ENSMUST00000210110.2
CDS-3UTR CAA 90 bp GTACGAAACACTAGGCAAGCAAGTGAGGTGCGGGGCGGCACGCTGGCGCTGGCAGTCTCCCGCTCTGGGTaGCTGGGGTCTTCTCCCTCG +
Preference number: 5 (lower is better)
Translates to: VRNTRQASEVRGGTLALAVSRSG*LGSSPS
Trigger: CGAGGGAGAAGACCCCAGCAACCCAGAGCGGGAGAC...TGCCAGCGCCAGCGTGCCGCCCCGCACCTCACTTGCTTGCCTAGTGTTTCGTAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000210655.2
CDS CCA 90 bp GGGGCCTCTGCTCCTGGCATCCGAGTCGGCTGCTGTCTCCCGCTCTaGGTTGCTTGTCCTGAGGCAATACCTGGGGTCTTCTCCCTCGCT +
Preference number: 5 (lower is better)
Translates to: GASAPGIRVGCCLPL*VACPEAIPGVFSLA
Trigger: AGCGAGGGAGAAGACCCCAGGTATTGCCTCAGGACAAGCAACCCAGAGCGGGAGACAGCAGCCGACTCGGATGCCAGGAGCAGAGGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000033123.8
CDS-3UTR CAA 90 bp CGAAACACTAGGCAAGCAAGTGAGGTGCGGGGCGGCACGCTGGCGCTGGCAGAGGCAGAAGGCCATCTCTaGAGGACATGGCACGGGGCA +
Preference number: 5 (lower is better)
Translates to: RNTRQASEVRGGTLALAEAEGHL*RTWHGA
Trigger: TGCCCCGTGCCATGTCCTCAAGAGATGGCCTTCTGC...CTCTGCCAGCGCCAGCGTGCCGCCCCGCACCTCACTTGCTTGCCTAGTGTTTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000210655.2
CDS-3UTR CAA 90 bp GTACGAAACACTAGGCAAGCAAGTGAGGTGCGGGGCGGCACGCTGGCGCTGGCACTGCGGTGCAGCCTCTaGGCCACCTTCAGTCCTGTC +
Preference number: 5 (lower is better)
Translates to: VRNTRQASEVRGGTLALALRCSL*ATFSPV
Trigger: GACAGGACTGAAGGTGGCCAAGAGGCTGCACCGCAG...TGCCAGCGCCAGCGTGCCGCCCCGCACCTCACTTGCTTGCCTAGTGTTTCGTAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210655.2
CDS GCA 90 bp ACACAGAAGTTGTCAGCATCTCCATCCATGCTGGGGGTCAGCCTCTaGAGTGGGCCCAAGAGGTCCCGAACCTCTTCCCGGGCTGGGCGC +
Preference number: 5 (lower is better)
Translates to: TQKLSASPSMLGVSL*SGPKRSRTSSRAGR
Trigger: GCGCCCAGCCCGGGAAGAGGTTCGGGACCTCTTGGGCCCACTGCAGAGGCTGACCCCCAGCATGGATGGAGATGCTGACAACTTCTGTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000033123.8
ENSMUST00000210110.2
CDS CCA 90 bp TGCTGTCTCCCGCTCTGGGTTGCTGGGGTCTTCTCCCTCGCTGTCTaGAAGGCTGCTGTTCCAGAAGACGGCCCCGGAGACCCTCTGCAT +
Preference number: 5 (lower is better)
Translates to: CCLPLWVAGVFSLAV*KAAVPEDGPGDPLH
Trigger: ATGCAGAGGGTCTCCGGGGCCGTCTTCTGGAACAGCAGCCTTCCAGACAGCGAGGGAGAAGACCCCAGCAACCCAGAGCGGGAGACAGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000210655.2
CDS TCA 90 bp TCTCCACCAGCAGCAGCATCCCGTAGAGGATCACCAGAAGCCCCGTaGGGCAGAAGCGCAGCTGAGAGAAGCCGATGGCGTGGTCGTAGA +
Preference number: 5 (lower is better)
Translates to: SPPAAASRRGSPEAP*GRSAAERSRWRGRR
Trigger: TCTACGACCACGCCATCGGCTTCTCTCAGCTGCGCTTCTGCCTCACGGGGCTTCTGGTGATCCTCTACGGGATGCTGCTGCTGGTGGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033123.8
CDS CCA 90 bp CTTCCTCCTCGTCCTCATCCAGCAGAAGGCCATCTCTTGAGGACATaGCACGGGGCAGGCCCTGAGACGGTTCTGGGGCTTTCCTCTCCA +
Preference number: 5 (lower is better)
Translates to: LPPRPHPAEGHLLRT*HGAGPETVLGLSSP
Trigger: TGGAGAGGAAAGCCCCAGAACCGTCTCAGGGCCTGCCCCGTGCCATGTCCTCAAGAGATGGCCTTCTGCTGGATGAGGACGAGGAGGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033123.8
ENSMUST00000210655.2
CDS-3UTR CAA 90 bp TACGAAACACTAGGCAAGCAAGTGAGGTGCGGGGCGGCACGCTGGCGCTGGCAGAAGACCACTGTCCTCTaGTCATCCCGGAGCAGCTCA +
Preference number: 5 (lower is better)
Translates to: YETLGKQVRCGAARWRWQKTTVL*SSRSSS
Trigger: TGAGCTGCTCCGGGATGACAAGAGGACAGTGGTCTT...CTGCCAGCGCCAGCGTGCCGCCCCGCACCTCACTTGCTTGCCTAGTGTTTCGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210655.2
CDS-3UTR CAA 90 bp GTACGAAACACTAGGCAAGCAAGTGAGGTGCGGGGCGGCACGCTGGCGCTGGCATGGTCTGGCCAGTTCTaGGGGATCAATGACGGTGCT +
Preference number: 5 (lower is better)
Translates to: VRNTRQASEVRGGTLALAWSGQF*GINDGA
Trigger: AGCACCGTCATTGATCCCCAAGAACTGGCCAGACCA...TGCCAGCGCCAGCGTGCCGCCCCGCACCTCACTTGCTTGCCTAGTGTTTCGTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000210655.2
CDS-3UTR CAA 90 bp GTACGAAACACTAGGCAAGCAAGTGAGGTGCGGGGCGGCACGCTGGCGCTGGCATTCTCTGGGTCCAGGTaGAATCTGATGGTGCCGCTG +
Preference number: 5 (lower is better)
Translates to: VRNTRQASEVRGGTLALAFSGSR*NLMVPL
Trigger: CAGCGGCACCATCAGATTCAACCTGGACCCAGAGAA...TGCCAGCGCCAGCGTGCCGCCCCGCACCTCACTTGCTTGCCTAGTGTTTCGTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210655.2
CDS TCA 90 bp TCCAGCAGAAGGCCATCTCTTGAGGACATGGCACGGGGCAGGCCCTaGGACGGTTCTGGGGCTTTCCTCTCCATGACTGTCTCCTTCTCC +
Preference number: 5 (lower is better)
Translates to: SSRRPSLEDMARGRP*DGSGAFLSMTVSFS
Trigger: GGAGAAGGAGACAGTCATGGAGAGGAAAGCCCCAGAACCGTCTCAGGGCCTGCCCCGTGCCATGTCCTCAAGAGATGGCCTTCTGCTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033123.8
ENSMUST00000210655.2
CDS CCA 90 bp GCGCACCCCCAGGTCCTGCAGGTCCTCAGGGGGCTTCACTTCCCTTaGCGTCTTGAAGAAGATGTACCTCCGCACCCGGATGACATTGAT +
Preference number: 5 (lower is better)
Translates to: AHPQVLQVLRGLHFP*RLEEDVPPHPDDID
Trigger: ATCAATGTCATCCGGGTGCGGAGGTACATCTTCTTCAAGACGCCAAGGGAAGTGAAGCCCCCTGAGGACCTGCAGGACCTGGGGGTGCGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000033123.8
CDS CCA 90 bp GTTGCTTGTCCTGAGGCAATACCTGGGGTCTTCTCCCTCGCTGTCTaGAAGGCTGCTGTTCCAGAAGACGGCCCCGGAGACCCTCTGCAT +
Preference number: 5 (lower is better)
Translates to: VACPEAIPGVFSLAV*KAAVPEDGPGDPLH
Trigger: ATGCAGAGGGTCTCCGGGGCCGTCTTCTGGAACAGCAGCCTTCCAGACAGCGAGGGAGAAGACCCCAGGTATTGCCTCAGGACAAGCAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000033123.8
CDS CCA 90 bp CAACCTTGTCCTGAGGCAATACCTGGGGTCTTCTCCCTCGCTGTCTaGAAGGCTGCTGTTCCAGAAGACGGCCCCGGAGACCCTCTGCAT +
Preference number: 5 (lower is better)
Translates to: QPCPEAIPGVFSLAV*KAAVPEDGPGDPLH
Trigger: ATGCAGAGGGTCTCCGGGGCCGTCTTCTGGAACAGCAGCCTTCCAGACAGCGAGGGAGAAGACCCCAGGTATTGCCTCAGGACAAGGTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000210110.2
CDS-3UTR CAA 90 bp TCTGAAGACCAGGAGCCCAGCATCCAGCTGCAGACGAGCATCCTGCCTTGGAGGTCCACGAAGCAGCCGTaGTTGAGGACACCTTGGTCC +
Preference number: 5 (lower is better)
Translates to: SEDQEPSIQLQTSILPWRSTKQP*LRTPWS
Trigger: GGACCAAGGTGTCCTCAACAACGGCTGCTTCGTGGA...CCTCCAAGGCAGGATGCTCGTCTGCAGCTGGATGCTGGGCTCCTGGTCTTCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210511.2
CDS TCA 90 bp AGAGCTCCCTGTGCAGGGAGTTGGAGATGGAGGTGGCGGCTGCGATaGGTACCACGCATGCTCCAATGTACTCCATGCGGACTTCTAGCC +
Preference number: 5 (lower is better)
Translates to: RAPCAGSWRWRWRLR*VPRMLQCTPCGLLA
Trigger: GGCTAGAAGTCCGCATGGAGTACATTGGAGCATGCGTGGTACTCATCGCAGCCGCCACCTCCATCTCCAACTCCCTGCACAGGGAGCTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033123.8
ENSMUST00000210655.2
CDS GCA 90 bp AGCAGAGAGCTCCCTGTGCAGGGAGTTGGAGATGGAGGTGGCGGCTaGGATGAGTACCACGCATGCTCCAATGTACTCCATGCGGACTTC +
Preference number: 5 (lower is better)
Translates to: SRELPVQGVGDGGGG*DEYHACSNVLHADF
Trigger: GAAGTCCGCATGGAGTACATTGGAGCATGCGTGGTACTCATCGCAGCCGCCACCTCCATCTCCAACTCCCTGCACAGGGAGCTCTCTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033123.8
ENSMUST00000210655.2
CDS GCA 90 bp CAGGATGGTGTGTACGCGGTGCGCGATGGTGACCACAGTGCGGTCTaGGAAGGCTGTCATCACCACCTTCTGGAGGATGTTTTCCGTAGC +
Preference number: 5 (lower is better)
Translates to: QDGVYAVRDGDHSAV*EGCHHHLLEDVFRS
Trigger: GCTACGGAAAACATCCTCCAGAAGGTGGTGATGACAGCCTTCGCAGACCGCACTGTGGTCACCATCGCGCACCGCGTACACACCATCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033123.8
ENSMUST00000210655.2
CDS GCA 90 bp GTCAAACTCCAGGATGGCTCCCCTCTTCAGGACCATCACGAGGTCTaGACTCAGGATGGTGTGTACGCGGTGCGCGATGGTGACCACAGT +
Preference number: 5 (lower is better)
Translates to: VKLQDGSPLQDHHEV*TQDGVYAVRDGDHS
Trigger: ACTGTGGTCACCATCGCGCACCGCGTACACACCATCCTGAGTGCAGACCTCGTGATGGTCCTGAAGAGGGGAGCCATCCTGGAGTTTGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033123.8
ENSMUST00000210655.2
CDS-3UTR CAA 90 bp CCCAGCTGGCATGTACAAATGGAGGTGGCGGGATTCTGTCACCCTGTTGACTCAGTTGTTGAGGACACCTaGGTCCACCCGGTAGGCGGC +
Preference number: 5 (lower is better)
Translates to: PSWHVQMEVAGFCHPVDSVVEDT*VHPVGG
Trigger: GCCGCCTACCGGGTGGACCAAGGTGTCCTCAACAAC...TGAGTCAACAGGGTGACAGAATCCCGCCACCTCCATTTGTACATGCCAGCTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210511.2
CDS-3UTR CAA 90 bp GTACGAAACACTAGGCAAGCAAGTGAGGTGCGGGGCGGCACGCTGGCGCTGGCAACCAAGACCATGTGCTaGAGTAGCTGGGAGAAGACA +
Preference number: 5 (lower is better)
Translates to: VRNTRQASEVRGGTLALATKTMC*SSWEKT
Trigger: TGTCTTCTCCCAGCTACTCAAGCACATGGTCTTGGT...TGCCAGCGCCAGCGTGCCGCCCCGCACCTCACTTGCTTGCCTAGTGTTTCGTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210655.2
CDS-3UTR CAA 90 bp CTGCATGGCTTAGCCCCATGGCTCTGGGAACATGAAACAGCACAACCTTGGATTCTGGTACTTGCCCGCTaGGCCTTGGGGTGCAGGCTC +
Preference number: 5 (lower is better)
Translates to: LHGLAPWLWEHETAQPWILVLAR*ALGCRL
Trigger: GAGCCTGCACCCCAAGGCCAAGCGGGCAAGTACCAG...AATCCAAGGTTGTGCTGTTTCATGTTCCCAGAGCCATGGGGCTAAGCCATGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000210110.2
CDS TCA 90 bp CTCCAATGTACTCCATGCGGACTTCTAGCCACCTGTTGGCTGCCGTaGGGAAGAGGGAGGCGATGTTGTTGGAGTCCGTGTACTCCAGGA +
Preference number: 5 (lower is better)
Translates to: LQCTPCGLLATCWLP*GRGRRCCWSPCTPG
Trigger: TCCTGGAGTACACGGACTCCAACAACATCGCCTCCCTCTTCCTCACGGCAGCCAACAGGTGGCTAGAAGTCCGCATGGAGTACATTGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033123.8
ENSMUST00000210655.2
CDS TCA 90 bp CAGCTTCAGCTGGGCGATCTCCAGAGCCTCCCAGAGTGTGCTGTCTaGGCATTTCTTCTCTGGGTCCAGGTTGAATCTGATGGTGCCGCT +
Preference number: 5 (lower is better)
Translates to: QLQLGDLQSLPECAV*AFLLWVQVESDGAA
Trigger: AGCGGCACCATCAGATTCAACCTGGACCCAGAGAAGAAATGCTCAGACAGCACACTCTGGGAGGCTCTGGAGATCGCCCAGCTGAAGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033123.8
ENSMUST00000210655.2
CDS GCA 90 bp GTCAAACTCCAGGATGGCTCCCCTCTTCAGGACCATCACGAGGTCTaGACTCAGGATGGTGTGTACGCGGTGCGTAGCCATGTCAATGGA +
Preference number: 5 (lower is better)
Translates to: VKLQDGSPLQDHHEV*TQDGVYAVRSHVNG
Trigger: TCCATTGACATGGCTACGCACCGCGTACACACCATCCTGAGTGCAGACCTCGTGATGGTCCTGAAGAGGGGAGCCATCCTGGAGTTTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210770.2
CDS CCA 90 bp AGAAACTGTGTCTTGGGCTGGAAGACATGGTTCTCCTTCCCGAGGTaGTCCACGATCCCAAAGATGCAGAGCGGTCCAGCAAAGCCCAGC +
Preference number: 5 (lower is better)
Translates to: RNCVLGWKTWFSFPR*STIPKMQSGPAKPS
Trigger: GCTGGGCTTTGCTGGACCGCTCTGCATCTTTGGGATCGTGGACCACCTCGGGAAGGAGAACCATGTCTTCCAGCCCAAGACACAGTTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033123.8
CDS CCA 90 bp CTCTTGTCATCCCGGAGCAGCTCAAGGATGCCAGCCTGCATCAGGTaGTCGCTCAGATGGACATCCAGAGCTGAGAAAGGGTCATCCAAG +
Preference number: 5 (lower is better)
Translates to: LLSSRSSSRMPACIR*SLRWTSRAEKGSSK
Trigger: CTTGGATGACCCTTTCTCAGCTCTGGATGTCCATCTGAGCGACCACCTGATGCAGGCTGGCATCCTTGAGCTGCTCCGGGATGACAAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033123.8
ENSMUST00000210655.2
CDS-3UTR CAA 90 bp ATGGCAGCCATGAAAGCCATCCCAGCTGGCATGTACAAATGGAGGTGGCGGGATACGAAGCAGCCGTTGTaGAGGACACCTTGGTCCACC +
Preference number: 5 (lower is better)
Translates to: MAAMKAIPAGMYKWRWRDTKQPL*RTPWST
Trigger: GGTGGACCAAGGTGTCCTCAACAACGGCTGCTTCGT...ATCCCGCCACCTCCATTTGTACATGCCAGCTGGGATGGCTTTCATGGCTGCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210511.2
CDS-3UTR CAA 90 bp GAGGTGATGGCAGCCATGAAAGCCATCCCAGCTGGCATGTACAAATGGAGGTGGACATGTGGCACTACGTaGAGCGCGTCCACGAAGCAG +
Preference number: 5 (lower is better)
Translates to: EVMAAMKAIPAGMYKWRWTCGTT*SASTKQ
Trigger: CTGCTTCGTGGACGCGCTCAACGTAGTGCCACATGT...CCACCTCCATTTGTACATGCCAGCTGGGATGGCTTTCATGGCTGCCATCACCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210511.2
CDS-3UTR CAA 90 bp AGCCATGAAAGCCATCCCAGCTGGCATGTACAAATGGAGGTGGCGGGATTCTGTAGGATCCAGCGCAGGTaGTGGCCAGGGAAATGGAGC +
Preference number: 5 (lower is better)
Translates to: SHESHPSWHVQMEVAGFCRIQRR*WPGKWS
Trigger: GCTCCATTTCCCTGGCCACAACCTGCGCTGGATCCT...ACAGAATCCCGCCACCTCCATTTGTACATGCCAGCTGGGATGGCTTTCATGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210511.2
CDS-3UTR CAA 90 bp CATGGCTCTGGGAACATGAAACAGCACAACCTTGGATTCGCACTTAGCACTCTCTCCCGGGCTGGGCGCTaGCGGTTCACAACCTTGAGG +
Preference number: 5 (lower is better)
Translates to: HGSGNMKQHNLGFALSTLSRAGR*RFTTLR
Trigger: CCTCAAGGTTGTGAACCGCAAGCGCCCAGCCCGGGA...GAGAGTGCTAAGTGCGAATCCAAGGTTGTGCTGTTTCATGTTCCCAGAGCCATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210110.2
CDS-3UTR CAA 90 bp GTACGAAACACTAGGCAAGCAAGTGAGGTGCGGGGCGGCACGCTGGCGCTGGCAGCGCACACTCAGGTTTaGAATTTGAATCTTCCCTTG +
Preference number: 5 (lower is better)
Translates to: VRNTRQASEVRGGTLALAAHTQV*NLNLPL
Trigger: CAAGGGAAGATTCAAATTCAAAACCTGAGTGTGCGC...TGCCAGCGCCAGCGTGCCGCCCCGCACCTCACTTGCTTGCCTAGTGTTTCGTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210655.2
CDS TCA 90 bp GAGGACAAATACTTAGTGCAGGCCCGCCATGGGATCTTGGCTCGCTaGTGCAGCACCGAAGATAAGTTGTCATCTTCCTCGCTCTCGGCC +
Preference number: 5 (lower is better)
Translates to: EDKYLVQARHGILAR*CSTEDKLSSSSLSA
Trigger: GGCCGAGAGCGAGGAAGATGACAACTTATCTTCGGTGCTGCATCAGCGAGCCAAGATCCCATGGCGGGCCTGCACTAAGTATTTGTCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033123.8
ENSMUST00000210655.2
CDS GCA 90 bp ACCACATCTGTTTCTGCAGTGCGCGATGGTGACCACAGTGCGGTCTaGGAAGGCTGTCATCACCACCTTCTGGAGGATGTTTTCCGTAGC +
Preference number: 5 (lower is better)
Translates to: TTSVSAVRDGDHSAV*EGCHHHLLEDVFRS
Trigger: GCTACGGAAAACATCCTCCAGAAGGTGGTGATGACAGCCTTCGCAGACCGCACTGTGGTCACCATCGCGCACTGCAGAAACAGATGTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209432.2
CDS CCA 90 bp ATGGCAGCCATGAAAGCCATCCCAGCTGGCATGTACAAATGGAGGTaGCGGGATTCTGTCACCCCATCAGACAGGATACCCTCAGCGATC +
Preference number: 5 (lower is better)
Translates to: MAAMKAIPAGMYKWR*RDSVTPSDRIPSAI
Trigger: GATCGCTGAGGGTATCCTGTCTGATGGGGTGACAGAATCCCGCCACCTCCATTTGTACATGCCAGCTGGGATGGCTTTCATGGCTGCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033123.8
CDS CCA 90 bp GAGGTGATGGCAGCCATGAAAGCCATCCCAGCTGGCATGTACAAATaGAGGTGGCGGGATTCTGTCACCCCATCAGACAGGATACCCTCA +
Preference number: 5 (lower is better)
Translates to: EVMAAMKAIPAGMYK*RWRDSVTPSDRIPS
Trigger: TGAGGGTATCCTGTCTGATGGGGTGACAGAATCCCGCCACCTCCATTTGTACATGCCAGCTGGGATGGCTTTCATGGCTGCCATCACCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033123.8
CDS CCA 90 bp TGTCCTTCTGGCTCAGAAGCTTCTCCGGTTTGTCAAACTCCAGGATaGCTCCCCTCTTCAGGACCATCACGAGGTCTGCACTCAGGATGG +
Preference number: 5 (lower is better)
Translates to: CPSGSEASPVCQTPG*LPSSGPSRGLHSGW
Trigger: CCATCCTGAGTGCAGACCTCGTGATGGTCCTGAAGAGGGGAGCCATCCTGGAGTTTGACAAACCGGAGAAGCTTCTGAGCCAGAAGGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000033123.8
ENSMUST00000210655.2
ENSMUST00000210770.2
CDS-3UTR CAA 90 bp TACGAAACACTAGGCAAGCAAGTGAGGTGCGGGGCGGCACGCTGGCGCTGGCAGACTCAGGTTTTGAATTaGAATCTTCCCTTGGTCTGG +
Preference number: 5 (lower is better)
Translates to: YETLGKQVRCGAARWRWQTQVLN*NLPLVW
Trigger: CCAGACCAAGGGAAGATTCAAATTCAAAACCTGAGT...CTGCCAGCGCCAGCGTGCCGCCCCGCACCTCACTTGCTTGCCTAGTGTTTCGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000210655.2
CDS GCA 90 bp GCGTACAGTTTGAGCAGTTTGATGCCCCGGAGCATCTCGTTGGTCTaGTTCAGCCTTTCATTGGAATATTCCAGGGTGCTCCGCTGTGCC +
Preference number: 5 (lower is better)
Translates to: AYSLSSLMPRSISLV*FSLSLEYSRVLRCA
Trigger: GGCACAGCGGAGCACCCTGGAATATTCCAATGAAAGGCTGAAGCAGACCAACGAGATGCTCCGGGGCATCAAACTGCTCAAACTGTACGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033123.8
CDS CCA 90 bp TCCGATGAAGAGGATGGGGAATGTGATGAAGAGCAGGAAGACATGTaGCACTACGTTGAGCGCGTCCACGAAGCAGCCGTTGTTGAGGAC +
Preference number: 5 (lower is better)
Translates to: SDEEDGECDEEQEDM*HYVERVHEAAVVED
Trigger: GTCCTCAACAACGGCTGCTTCGTGGACGCGCTCAACGTAGTGCCACATGTCTTCCTGCTCTTCATCACATTCCCCATCCTCTTCATCGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033123.8
ENSMUST00000210511.2
CDS CCA 90 bp TGCTTCAGCCTTTCATTGGAATATTCCAGGGTGCTCCGCTGTGCCTaGGAGAGCTTGGTGGCCACAAAGTACTGTACAGGAGCCAGCAGA +
Preference number: 5 (lower is better)
Translates to: CFSLSLEYSRVLRCA*ESLVATKYCTGASR
Trigger: TCTGCTGGCTCCTGTACAGTACTTTGTGGCCACCAAGCTCTCCCAGGCACAGCGGAGCACCCTGGAATATTCCAATGAAAGGCTGAAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033123.8
CDS CCA 90 bp AAGGCCACCGAGGGTGAGAAGTCTGACTCTTTGAAGAAGCTGACGTaGCCCACAAAGGTAATGAGGACGGCAGCAATGGGGATAGCTGTG +
Preference number: 5 (lower is better)
Translates to: KATEGEKSDSLKKLT*PTKVMRTAAMGIAV
Trigger: CACAGCTATCCCCATTGCTGCCGTCCTCATTACCTTTGTGGGCCACGTCAGCTTCTTCAAAGAGTCAGACTTCTCACCCTCGGTGGCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033123.8
CDS CCA 90 bp CGGAGCAGCTCAAGGATGCCAGCCTGCATCAGGTGGTCGCTCAGATaGACATCCAGAGCTGAGAAAGGGTCATCCAAGAAGACAACATTG +
Preference number: 5 (lower is better)
Translates to: RSSSRMPACIRWSLR*TSRAEKGSSKKTTL
Trigger: CAATGTTGTCTTCTTGGATGACCCTTTCTCAGCTCTGGATGTCCATCTGAGCGACCACCTGATGCAGGCTGGCATCCTTGAGCTGCTCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033123.8
ENSMUST00000210655.2
CDS-3UTR CAA 90 bp CATGGCTCTGGGAACATGAAACAGCACAACCTTGGATTCGCACTTAGCACTCTCTTGCGGTTCACAACCTaGAGGGGCACCGCCTGGTAC +
Preference number: 5 (lower is better)
Translates to: HGSGNMKQHNLGFALSTLLRFTT*RGTAWY
Trigger: GTACCAGGCGGTGCCCCTCAAGGTTGTGAACCGCAA...GAGAGTGCTAAGTGCGAATCCAAGGTTGTGCTGTTTCATGTTCCCAGAGCCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210110.2
CDS TCA 90 bp GATGCCAGCCTGCATCAGGTGGTCGCTCAGATGGACATCCAGAGCTaGGAAAGGGTCATCCAAGAAGACAACATTGGTGTGCTGGTAGAG +
Preference number: 5 (lower is better)
Translates to: DASLHQVVAQMDIQS*ERVIQEDNIGVLVE
Trigger: CTCTACCAGCACACCAATGTTGTCTTCTTGGATGACCCTTTCTCAGCTCTGGATGTCCATCTGAGCGACCACCTGATGCAGGCTGGCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033123.8
ENSMUST00000210655.2
CDS CCA 90 bp ATAGTAGACCACAGAGGTGATGGCAGCCATGAAAGCCATCCCAGCTaGCATGTACAAATGGAGGTGGCGGGATTCTGTCACCCCATCAGA +
Preference number: 5 (lower is better)
Translates to: IVDHRGDGSHESHPS*HVQMEVAGFCHPIR
Trigger: TCTGATGGGGTGACAGAATCCCGCCACCTCCATTTGTACATGCCAGCTGGGATGGCTTTCATGGCTGCCATCACCTCTGTGGTCTACTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033123.8
CDS-3UTR CAA 90 bp GGTTCTTTTATTCTCCCCTCTGCAAACCATAGTTTGCCTTCATCAGAACTGCATGGCACCGCCTGGTACTaGCCCGCTTGGCCTTGGGGT +
Preference number: 5 (lower is better)
Translates to: GSFILPSANHSLPSSELHGTAWY*PAWPWG
Trigger: ACCCCAAGGCCAAGCGGGCAAGTACCAGGCGGTGCC...ATGCAGTTCTGATGAAGGCAAACTATGGTTTGCAGAGGGGAGAATAAAAGAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000210110.2
CDS-3UTR CAA 90 bp TTTACAAGTGATTTACAGTACGAAACACTAGGCAAGCAAGTGAGGTGCGGGGCGGCAGAGGGAGCTGCGTaGTGTCATCCAGCTGCTGCA +
Preference number: 5 (lower is better)
Translates to: FTSDLQYETLGKQVRCGAAEGAA*CHPAAA
Trigger: TGCAGCAGCTGGATGACACAACGCAGCTCCCTCTGC...CGCCCCGCACCTCACTTGCTTGCCTAGTGTTTCGTACTGTAAATCACTTGTAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210655.2
CDS GCA 90 bp GGTGGCCACAAAGTACTGTACAGGAGCCAGCAGAATGATGACAGCTaGTCCAATCAAGGCACTGACCCCAAGGATGTAGTAGAGGAGGAT +
Preference number: 5 (lower is better)
Translates to: GGHKVLYRSQQNDDS*SNQGTDPKDVVEED
Trigger: ATCCTCCTCTACTACATCCTTGGGGTCAGTGCCTTGATTGGAGCAGCTGTCATCATTCTGCTGGCTCCTGTACAGTACTTTGTGGCCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033123.8
CDS TCA 90 bp CTCCAGCGTGGATGGGATGTGCTGGTCAATGGTGTTACAGTCAGATaGAAATCTGTTCAGGATACTCCCCAGGGGCGTGGTCTCAAAGAA +
Preference number: 5 (lower is better)
Translates to: LQRGWDVLVNGVTVR*KSVQDTPQGRGLKE
Trigger: TTCTTTGAGACCACGCCCCTGGGGAGTATCCTGAACAGATTTTCATCTGACTGTAACACCATTGACCAGCACATCCCATCCACGCTGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033123.8
ENSMUST00000210655.2
CDS CCA 90 bp CACTCAGGTTTTGAATTTGAATCTTCCCTTGGTCTGGCCAGTTCTTaGGGATCAATGACGGTGCTAGGAGCCCCTCATAGCTCTCTGCCT +
Preference number: 5 (lower is better)
Translates to: HSGFEFESSLGLASS*GSMTVLGAPHSSLP
Trigger: AGGCAGAGAGCTATGAGGGGCTCCTAGCACCGTCATTGATCCCCAAGAACTGGCCAGACCAAGGGAAGATTCAAATTCAAAACCTGAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033123.8
ENSMUST00000210655.2
CDS-3UTR CAA 90 bp TTATTTACAAGTGATTTACAGTACGAAACACTAGGCAAGCAAGTGAGGTGCGGGGCCAGGATGATGCGATaGAGCAGGCTGCGGTGCAGC +
Preference number: 5 (lower is better)
Translates to: LFTSDLQYETLGKQVRCGARMMR*SRLRCS
Trigger: GCTGCACCGCAGCCTGCTCAATCGCATCATCCTGGC...CCCGCACCTCACTTGCTTGCCTAGTGTTTCGTACTGTAAATCACTTGTAAATAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210655.2
CDS-3UTR CAA 90 bp TTTACAAGTGATTTACAGTACGAAACACTAGGCAAGCAAGTGAGGTGCGGGGCGCTTCACAGCCCCCAATaGGATCTCCATGTCTGCCAG +
Preference number: 5 (lower is better)
Translates to: FTSDLQYETLGKQVRCGALHSPQ*DLHVCQ
Trigger: CTGGCAGACATGGAGATCCAATTGGGGGCTGTGAAG...CGCCCCGCACCTCACTTGCTTGCCTAGTGTTTCGTACTGTAAATCACTTGTAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000210655.2
CDS-3UTR CAA 90 bp TCTTTATTTACAAGTGATTTACAGTACGAAACACTAGGCAAGCAAGTGAGGTGCGGGGCGATGAGGGCATaGACGTGCTTCAGCACGGGC +
Preference number: 5 (lower is better)
Translates to: SLFTSDLQYETLGKQVRCGAMRA*TCFSTG
Trigger: GCCCGTGCTGAAGCACGTCAATGCCCTCATCGCCCC...GCACCTCACTTGCTTGCCTAGTGTTTCGTACTGTAAATCACTTGTAAATAAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210655.2
CDS-3UTR CAA 90 bp TTATTTACAAGTGATTTACAGTACGAAACACTAGGCAAGCAAGTGAGGTGCGGGGTGTGCAGCGGCAGCTaGGCGATGTCGATGCCATCA +
Preference number: 5 (lower is better)
Translates to: LFTSDLQYETLGKQVRCGVCSGS*AMSMPS
Trigger: TGATGGCATCGACATCGCCAAGCTGCCGCTGCACAC...CCCGCACCTCACTTGCTTGCCTAGTGTTTCGTACTGTAAATCACTTGTAAATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210655.2
CDS GCA 72 bp GCATGGCAGAGAGCCCTCCAGATGGCCCGGGCGCCCTaGTGGCTCTGCGTGTCTTTCCGCGCCTGGGCATCG +
Preference number: 6 (lower is better)
Translates to: AWQRALQMARAP*WLCVSFRAWAS
Trigger: CGATGCCCAGGCGCGGAAAGACACGCAGAGCCAGCAGGGCGCCCGGGCCATCTGGAGGGCTCTCTGCCATGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033123.8
CDS CCA 72 bp AGACGGCCCCGGAGACCCTCTGCATCTCCCCCAGGGTaGCCAGAAGGAGCGAGGACTTGCCGCAGCCCACCT +
Preference number: 6 (lower is better)
Translates to: RRPRRPSASPPG*PEGARTCRSPP
Trigger: AGGTGGGCTGCGGCAAGTCCTCGCTCCTTCTGGCCACCCTGGGGGAGATGCAGAGGGTCTCCGGGGCCGTCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000033123.8
ENSMUST00000210110.2
ENSMUST00000210655.2
CDS CCA 72 bp GGCGTCTCCCAAAGGCATGGCAGAGAGCCCTCCAGATaGCCCGGGCGCCCTGCTGGCTCTGCGTGTCTTTCC +
Preference number: 6 (lower is better)
Translates to: GVSQRHGREPSR*PGRPAGSACLS
Trigger: GGAAAGACACGCAGAGCCAGCAGGGCGCCCGGGCCATCTGGAGGGCTCTCTGCCATGCCTTTGGGAGACGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033123.8
CDS CCA 72 bp CAGTGGGCCCAAGAGGTCCCGAACCTCTTCCCGGGCTaGGCGCTTGCGGTTCACAACCTTGAGGGGCACCGC +
Preference number: 6 (lower is better)
Translates to: QWAQEVPNLFPG*ALAVHNLEGHR
Trigger: GCGGTGCCCCTCAAGGTTGTGAACCGCAAGCGCCCAGCCCGGGAAGAGGTTCGGGACCTCTTGGGCCCACTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033123.8
ENSMUST00000210110.2
CDS CAA 90 bp TGCAGTGGGCCCAAGAGGTCCCGAACCTCTTCCCGGGCTGGGCGCTaGCGGTTCACAACCTTGAGGGGCACCGCCTGGTACTTGCCCGCT +
Preference number: 6 (lower is better)
Translates to: CSGPKRSRTSSRAGR*RFTTLRGTAWYLPA
Trigger: AGCGGGCAAGTACCAGGCGGTGCCCCTCAAGGTTGTGAACCGCAAGCGCCCAGCCCGGGAAGAGGTTCGGGACCTCTTGGGCCCACTGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033123.8
ENSMUST00000210110.2
CDS TCA 72 bp CCTCTTCCCGGGCTGGGCGCTTGCGGTTCACAACCTTaGGGGGCACCGCCTGGTACTTGCCCGCTTGGCCTT +
Preference number: 6 (lower is better)
Translates to: PLPGLGACGSQP*GAPPGTCPLGL
Trigger: AAGGCCAAGCGGGCAAGTACCAGGCGGTGCCCCTCAAGGTTGTGAACCGCAAGCGCCCAGCCCGGGAAGAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000033123.8
ENSMUST00000210110.2
CDS CCA 72 bp GGGCGCTTGCGGTTCACAACCTTGAGGGGCACCGCCTaGTACTTGCCCGCTTGGCCTTGGGGTGCAGGCTCT +
Preference number: 6 (lower is better)
Translates to: GRLRFTTLRGTA*YLPAWPWGAGS
Trigger: AGAGCCTGCACCCCAAGGCCAAGCGGGCAAGTACCAGGCGGTGCCCCTCAAGGTTGTGAACCGCAAGCGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033123.8
ENSMUST00000210110.2
CDS CAA 72 bp TTGCGGTTCACAACCTTGAGGGGCACCGCCTGGTACTaGCCCGCTTGGCCTTGGGGTGCAGGCTCTCGGGGG +
Preference number: 6 (lower is better)
Translates to: LRFTTLRGTAWY*PAWPWGAGSRG
Trigger: CCCCCGAGAGCCTGCACCCCAAGGCCAAGCGGGCAAGTACCAGGCGGTGCCCCTCAAGGTTGTGAACCGCAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033123.8
ENSMUST00000210110.2
CDS CAA 72 bp ACCTCTTCCCGGGCTGGGCGCTTGCGGTTCACAACCTaGAGGGGCACCGCCTGGTACTTGCCCGCTTGGCCT +
Preference number: 6 (lower is better)
Translates to: TSSRAGRLRFTT*RGTAWYLPAWP
Trigger: AGGCCAAGCGGGCAAGTACCAGGCGGTGCCCCTCAAGGTTGTGAACCGCAAGCGCCCAGCCCGGGAAGAGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033123.8
ENSMUST00000210110.2
CDS GCA 72 bp TGGCATCCGAGTCGGCTGCTGTCTCCCGCTCTGGGTTaGTGGGGTCTTCTCCCTCGCTGTCTGGAAGGCTGC +
Preference number: 6 (lower is better)
Translates to: WHPSRLLSPALG*WGLLPRCLEGC
Trigger: GCAGCCTTCCAGACAGCGAGGGAGAAGACCCCAGCAACCCAGAGCGGGAGACAGCAGCCGACTCGGATGCCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210655.2
CDS CCA 72 bp AGCATCTCCATCCATGCTGGGGGTCAGCCTCTGCAGTaGGCCCAAGAGGTCCCGAACCTCTTCCCGGGCTGG +
Preference number: 6 (lower is better)
Translates to: SISIHAGGQPLQ*AQEVPNLFPGW
Trigger: CCAGCCCGGGAAGAGGTTCGGGACCTCTTGGGCCCACTGCAGAGGCTGACCCCCAGCATGGATGGAGATGCT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000033123.8
ENSMUST00000210110.2
CDS CCA 72 bp GCTCCTGGCATCCGAGTCGGCTGCTGTCTCCCGCTCTaGGTTGCTGGGGTCTTCTCCCTCGCTGTCTGGAAG +
Preference number: 6 (lower is better)
Translates to: APGIRVGCCLPL*VAGVFSLAVWK
Trigger: CTTCCAGACAGCGAGGGAGAAGACCCCAGCAACCCAGAGCGGGAGACAGCAGCCGACTCGGATGCCAGGAGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210655.2
CDS CAA 72 bp GAGCGCGTCCACGAAGCAGCCGTTGTTGAGGACACCTaGGTCCACCCGGTAGGCGGCCGAGTGGTTCTCGGT +
Preference number: 6 (lower is better)
Translates to: ERVHEAAVVEDT*VHPVGGRVVLG
Trigger: ACCGAGAACCACTCGGCCGCCTACCGGGTGGACCAAGGTGTCCTCAACAACGGCTGCTTCGTGGACGCGCTC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033123.8
ENSMUST00000210511.2
CDS GCA 72 bp GGTTGCTGGGGTCTTCTCCCTCGCTGTCTGGAAGGCTaGTGTTCCAGAAGACGGCCCCGGAGACCCTCTGCA +
Preference number: 6 (lower is better)
Translates to: GCWGLLPRCLEG*CSRRRPRRPSA
Trigger: TGCAGAGGGTCTCCGGGGCCGTCTTCTGGAACAGCAGCCTTCCAGACAGCGAGGGAGAAGACCCCAGCAACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000210655.2
CDS CAA 90 bp CACTACGTTGAGCGCGTCCACGAAGCAGCCGTTGTTGAGGACACCTaGGTCCACCCGGTAGGCGGCCGAGTGGTTCTCGGTGCCGCAGAA +
Preference number: 6 (lower is better)
Translates to: HYVERVHEAAVVEDT*VHPVGGRVVLGAAE
Trigger: TTCTGCGGCACCGAGAACCACTCGGCCGCCTACCGGGTGGACCAAGGTGTCCTCAACAACGGCTGCTTCGTGGACGCGCTCAACGTAGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033123.8
ENSMUST00000210511.2
CDS CAA 90 bp CCTCTGCTCCTGGCATCCGAGTCGGCTGCTGTCTCCCGCTCTGGGTaGCTTGTCCTGAGGCAATACCTGGGGTCTTCTCCCTCGCTGTCT +
Preference number: 6 (lower is better)
Translates to: PLLLASESAAVSRSG*LVLRQYLGSSPSLS
Trigger: AGACAGCGAGGGAGAAGACCCCAGGTATTGCCTCAGGACAAGCAACCCAGAGCGGGAGACAGCAGCCGACTCGGATGCCAGGAGCAGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033123.8
CDS TCA 72 bp GCAGCAGCATCCCGTAGAGGATCACCAGAAGCCCCGTaGGGCAGAAGCGCAGCTGAGAGAAGCCGATGGCGT +
Preference number: 6 (lower is better)
Translates to: AAASRRGSPEAP*GRSAAERSRWR
Trigger: ACGCCATCGGCTTCTCTCAGCTGCGCTTCTGCCTCACGGGGCTTCTGGTGATCCTCTACGGGATGCTGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033123.8
CDS GCA 72 bp TTGTCAGCATCTCCATCCATGCTGGGGGTCAGCCTCTaGAGTGGGCCCAAGAGGTCCCGAACCTCTTCCCGG +
Preference number: 6 (lower is better)
Translates to: LSASPSMLGVSL*SGPKRSRTSSR
Trigger: CCGGGAAGAGGTTCGGGACCTCTTGGGCCCACTGCAGAGGCTGACCCCCAGCATGGATGGAGATGCTGACAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000033123.8
ENSMUST00000210110.2
CDS CCA 72 bp GCTCCTGGCATCCGAGTCGGCTGCTGTCTCCCGCTCTaGGTTGCTTGTCCTGAGGCAATACCTGGGGTCTTC +
Preference number: 6 (lower is better)
Translates to: APGIRVGCCLPL*VACPEAIPGVF
Trigger: GAAGACCCCAGGTATTGCCTCAGGACAAGCAACCCAGAGCGGGAGACAGCAGCCGACTCGGATGCCAGGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033123.8
CDS CCA 72 bp CGTCCTCATCCAGCAGAAGGCCATCTCTTGAGGACATaGCACGGGGCAGGCCCTGAGACGGTTCTGGGGCTT +
Preference number: 6 (lower is better)
Translates to: RPHPAEGHLLRT*HGAGPETVLGL
Trigger: AAGCCCCAGAACCGTCTCAGGGCCTGCCCCGTGCCATGTCCTCAAGAGATGGCCTTCTGCTGGATGAGGACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033123.8
ENSMUST00000210655.2
CDS CAA 72 bp CTGGCATCCGAGTCGGCTGCTGTCTCCCGCTCTGGGTaGCTTGTCCTGAGGCAATACCTGGGGTCTTCTCCC +
Preference number: 6 (lower is better)
Translates to: LASESAAVSRSG*LVLRQYLGSSP
Trigger: GGGAGAAGACCCCAGGTATTGCCTCAGGACAAGCAACCCAGAGCGGGAGACAGCAGCCGACTCGGATGCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033123.8
CDS CAA 90 bp AGGGGCGTGGTCTCAAAGAACCTCATGGGGGCCAGGATGATGCGATaGAGCAGGCTGCGGTGCAGCCTCTTGGCCACCTTCAGTCCTGTC +
Preference number: 6 (lower is better)
Translates to: RGVVSKNLMGARMMR*SRLRCSLLATFSPV
Trigger: GACAGGACTGAAGGTGGCCAAGAGGCTGCACCGCAGCCTGCTCAATCGCATCATCCTGGCCCCCATGAGGTTCTTTGAGACCACGCCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000033123.8
ENSMUST00000210655.2
CDS CAA 90 bp TCTAGCCACCTGTTGGCTGCCGTGAGGAAGAGGGAGGCGATGTTGTaGGAGTCCGTGTACTCCAGGAGCTTCTGCTGGAACCGGGCCTCG +
Preference number: 6 (lower is better)
Translates to: SSHLLAAVRKREAML*ESVYSRSFCWNRAS
Trigger: CGAGGCCCGGTTCCAGCAGAAGCTCCTGGAGTACACGGACTCCAACAACATCGCCTCCCTCTTCCTCACGGCAGCCAACAGGTGGCTAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033123.8
ENSMUST00000210655.2
CDS TCA 72 bp AGGCCATCTCTTGAGGACATGGCACGGGGCAGGCCCTaGGACGGTTCTGGGGCTTTCCTCTCCATGACTGTC +
Preference number: 6 (lower is better)
Translates to: RPSLEDMARGRP*DGSGAFLSMTV
Trigger: GACAGTCATGGAGAGGAAAGCCCCAGAACCGTCTCAGGGCCTGCCCCGTGCCATGTCCTCAAGAGATGGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033123.8
ENSMUST00000210655.2
CDS GCA 72 bp AATACCTGGGGTCTTCTCCCTCGCTGTCTGGAAGGCTaGTGTTCCAGAAGACGGCCCCGGAGACCCTCTGCA +
Preference number: 6 (lower is better)
Translates to: NTWGLLPRCLEG*CSRRRPRRPSA
Trigger: TGCAGAGGGTCTCCGGGGCCGTCTTCTGGAACAGCAGCCTTCCAGACAGCGAGGGAGAAGACCCCAGGTATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033123.8
ENSMUST00000210110.2
CDS GCA 72 bp AAAAGGCGAGAGAGAAGGAGGACTTCCCACTGCCTGTaGGGCCGCAGATCCCGATCTTCTGTCCTGGGGCGA +
Preference number: 6 (lower is better)
Translates to: KRRERRRTSHCL*GRRSRSSVLGR
Trigger: TCGCCCCAGGACAGAAGATCGGGATCTGCGGCCGCACAGGCAGTGGGAAGTCCTCCTTCTCTCTCGCCTTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033123.8
ENSMUST00000210655.2
CDS GCA 72 bp CAGGATGGCTCCCCTCTTCAGGACCATCACGAGGTCTaGACTCAGGATGGTGTGTACGCGGTGCGCGATGGT +
Preference number: 6 (lower is better)
Translates to: QDGSPLQDHHEV*TQDGVYAVRDG
Trigger: ACCATCGCGCACCGCGTACACACCATCCTGAGTGCAGACCTCGTGATGGTCCTGAAGAGGGGAGCCATCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033123.8
ENSMUST00000210655.2
CDS CAA 90 bp ACTTCTAGCCACCTGTTGGCTGCCGTGAGGAAGAGGGAGGCGATGTaGTTGGAGTCCGTGTACTCCAGGAGCTTCTGCTGGAACCGGGCC +
Preference number: 6 (lower is better)
Translates to: TSSHLLAAVRKREAM*LESVYSRSFCWNRA
Trigger: GGCCCGGTTCCAGCAGAAGCTCCTGGAGTACACGGACTCCAACAACATCGCCTCCCTCTTCCTCACGGCAGCCAACAGGTGGCTAGAAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033123.8
ENSMUST00000210655.2
CDS GCA 72 bp GCGATGTTGTTGGAGTCCGTGTACTCCAGGAGCTTCTaGTGGAACCGGGCCTCGTACCTGAAGGCACGGATG +
Preference number: 6 (lower is better)
Translates to: AMLLESVYSRSF*WNRASYLKARM
Trigger: CATCCGTGCCTTCAGGTACGAGGCCCGGTTCCAGCAGAAGCTCCTGGAGTACACGGACTCCAACAACATCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033123.8
ENSMUST00000210655.2
CDS GCA 72 bp TCCTTCTGTGATGATGGCATCCAGGCCTCCTGGCAGTaGCTTCACCACCAGCTTCAGCTGGGCGATCTCCAG +
Preference number: 6 (lower is better)
Translates to: SFCDDGIQASWQ*LHHQLQLGDLQ
Trigger: CTGGAGATCGCCCAGCTGAAGCTGGTGGTGAAGGCACTGCCAGGAGGCCTGGATGCCATCATCACAGAAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033123.8
ENSMUST00000210655.2
ENSMUST00000210770.2
CDS GCA 72 bp CAGGATGGCTCCCCTCTTCAGGACCATCACGAGGTCTaGACTCAGGATGGTGTGTACGCGGTGCGTAGCCAT +
Preference number: 6 (lower is better)
Translates to: QDGSPLQDHHEV*TQDGVYAVRSH
Trigger: ATGGCTACGCACCGCGTACACACCATCCTGAGTGCAGACCTCGTGATGGTCCTGAAGAGGGGAGCCATCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210770.2
CDS CCA 72 bp CAGGTCCTGCAGGTCCTCAGGGGGCTTCACTTCCCTTaGCGTCTTGAAGAAGATGTACCTCCGCACCCGGAT +
Preference number: 6 (lower is better)
Translates to: QVLQVLRGLHFP*RLEEDVPPHPD
Trigger: ATCCGGGTGCGGAGGTACATCTTCTTCAAGACGCCAAGGGAAGTGAAGCCCCCTGAGGACCTGCAGGACCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000033123.8
CDS CAA 72 bp GTCTCAAAGAACCTCATGGGGGCCAGGATGATGCGATaGAGCAGGCTGCGGTGCAGCCTCTTGGCCACCTTC +
Preference number: 6 (lower is better)
Translates to: VSKNLMGARMMR*SRLRCSLLATF
Trigger: GAAGGTGGCCAAGAGGCTGCACCGCAGCCTGCTCAATCGCATCATCCTGGCCCCCATGAGGTTCTTTGAGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000033123.8
ENSMUST00000210655.2
CDS CAA 72 bp CACCTGTTGGCTGCCGTGAGGAAGAGGGAGGCGATGTaGTTGGAGTCCGTGTACTCCAGGAGCTTCTGCTGG +
Preference number: 6 (lower is better)
Translates to: HLLAAVRKREAM*LESVYSRSFCW
Trigger: CCAGCAGAAGCTCCTGGAGTACACGGACTCCAACAACATCGCCTCCCTCTTCCTCACGGCAGCCAACAGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033123.8
ENSMUST00000210655.2
CDS CAA 72 bp CAGATCCCGATCTTCTGTCCTGGGGCGATGAGGGCATaGACGTGCTTCAGCACGGGCTTCAGGGAGCTGTCA +
Preference number: 6 (lower is better)
Translates to: QIPIFCPGAMRA*TCFSTGFRELS
Trigger: TGACAGCTCCCTGAAGCCCGTGCTGAAGCACGTCAATGCCCTCATCGCCCCAGGACAGAAGATCGGGATCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033123.8
ENSMUST00000210655.2
CDS CAA 72 bp ATGGAGAGGCGTGAACGGAGCGTGTGCAGCGGCAGCTaGGCGATGTCGATGCCATCAATGATGATGCGCCCT +
Preference number: 6 (lower is better)
Translates to: MERRERSVCSGS*AMSMPSMMMRP
Trigger: AGGGCGCATCATCATTGATGGCATCGACATCGCCAAGCTGCCGCTGCACACGCTCCGTTCACGCCTCTCCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033123.8
ENSMUST00000210655.2
CDS TCA 72 bp GCAGGCCCTGAGACGGTTCTGGGGCTTTCCTCTCCATaGCTGTCTCCTTCTCCAGCTCTTGGTCTTGCCTGT +
Preference number: 6 (lower is better)
Translates to: AGPETVLGLSSP*LSPSPALGLAC
Trigger: ACAGGCAAGACCAAGAGCTGGAGAAGGAGACAGTCATGGAGAGGAAAGCCCCAGAACCGTCTCAGGGCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033123.8
ENSMUST00000210655.2
CDS TCA 72 bp CAAGGCACAGTGCAATTCCCAGGCTGCAGAGCACGGTaGATACCATGGCATAGACAGACTGGTCCAGGGCGC +
Preference number: 6 (lower is better)
Translates to: QGTVQFPGCRAR*IPWHRQTGPGR
Trigger: GCGCCCTGGACCAGTCTGTCTATGCCATGGTATTCACCGTGCTCTGCAGCCTGGGAATTGCACTGTGCCTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033123.8
ENSMUST00000210655.2
CDS TCA 72 bp TGTGCAGGGAGTTGGAGATGGAGGTGGCGGCTGCGATaGGTACCACGCATGCTCCAATGTACTCCATGCGGA +
Preference number: 6 (lower is better)
Translates to: CAGSWRWRWRLR*VPRMLQCTPCG
Trigger: TCCGCATGGAGTACATTGGAGCATGCGTGGTACTCATCGCAGCCGCCACCTCCATCTCCAACTCCCTGCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033123.8
ENSMUST00000210655.2
CDS GCA 72 bp CTCCCTGTGCAGGGAGTTGGAGATGGAGGTGGCGGCTaGGATGAGTACCACGCATGCTCCAATGTACTCCAT +
Preference number: 6 (lower is better)
Translates to: LPVQGVGDGGGG*DEYHACSNVLH
Trigger: ATGGAGTACATTGGAGCATGCGTGGTACTCATCGCAGCCGCCACCTCCATCTCCAACTCCCTGCACAGGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033123.8
ENSMUST00000210655.2
CDS CCA 72 bp GTCTTGGGCTGGAAGACATGGTTCTCCTTCCCGAGGTaGTCCACGATCCCAAAGATGCAGAGCGGTCCAGCA +
Preference number: 6 (lower is better)
Translates to: VLGWKTWFSFPR*STIPKMQSGPA
Trigger: TGCTGGACCGCTCTGCATCTTTGGGATCGTGGACCACCTCGGGAAGGAGAACCATGTCTTCCAGCCCAAGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033123.8
CDS CAA 72 bp CCCCGGAGCATCTCGTTGGTCTGCTTCAGCCTTTCATaGGAATATTCCAGGGTGCTCCGCTGTGCCTGGGAG +
Preference number: 6 (lower is better)
Translates to: PRSISLVCFSLS*EYSRVLRCAWE
Trigger: CTCCCAGGCACAGCGGAGCACCCTGGAATATTCCAATGAAAGGCTGAAGCAGACCAACGAGATGCTCCGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033123.8
CDS CAA 72 bp CTGTTGGCTGCCGTGAGGAAGAGGGAGGCGATGTTGTaGGAGTCCGTGTACTCCAGGAGCTTCTGCTGGAAC +
Preference number: 6 (lower is better)
Translates to: LLAAVRKREAML*ESVYSRSFCWN
Trigger: GTTCCAGCAGAAGCTCCTGGAGTACACGGACTCCAACAACATCGCCTCCCTCTTCCTCACGGCAGCCAACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033123.8
ENSMUST00000210655.2
CDS CAA 90 bp TGTAGGATGATGGAGAGGCGTGAACGGAGCGTGTGCAGCGGCAGCTaGGCGATGTCGATGCCATCAATGATGATGCGCCCTTCGAACATG +
Preference number: 6 (lower is better)
Translates to: CRMMERRERSVCSGS*AMSMPSMMMRPSNM
Trigger: CATGTTCGAAGGGCGCATCATCATTGATGGCATCGACATCGCCAAGCTGCCGCTGCACACGCTCCGTTCACGCCTCTCCATCATCCTACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033123.8
ENSMUST00000210655.2
CDS TCA 72 bp GCAGGTCCCTGGACGCCACTCGGAAGTATTTCTGGATaGAGTAGCACACCACAGCTAGGGGTAAGAGGGCCA +
Preference number: 6 (lower is better)
Translates to: AGPWTPLGSISG*SSTPQLGVRGP
Trigger: TGGCCCTCTTACCCCTAGCTGTGGTGTGCTACTTCATCCAGAAATACTTCCGAGTGGCGTCCAGGGACCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033123.8
ENSMUST00000210655.2
CDS CCA 72 bp GCAGCCATGAAAGCCATCCCAGCTGGCATGTACAAATaGAGGTGGCGGGATTCTGTCACCCCATCAGACAGG +
Preference number: 6 (lower is better)
Translates to: AAMKAIPAGMYK*RWRDSVTPSDR
Trigger: CCTGTCTGATGGGGTGACAGAATCCCGCCACCTCCATTTGTACATGCCAGCTGGGATGGCTTTCATGGCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033123.8
CDS CCA 72 bp CCCGGAGCATCTCGTTGGTCTGCTTCAGCCTTTCATTaGAATATTCCAGGGTGCTCCGCTGTGCCTGGGAGA +
Preference number: 6 (lower is better)
Translates to: PGASRWSASAFH*NIPGCSAVPGR
Trigger: TCTCCCAGGCACAGCGGAGCACCCTGGAATATTCCAATGAAAGGCTGAAGCAGACCAACGAGATGCTCCGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033123.8
CDS CAA 90 bp GCCTCCCAGAGTGTGCTGTCTGAGCATTTCTTCTCTGGGTCCAGGTaGAATCTGATGGTGCCGCTGAAGAGGACAGGGTCCTGTAGGATG +
Preference number: 6 (lower is better)
Translates to: ASQSVLSEHFFSGSR*NLMVPLKRTGSCRM
Trigger: CATCCTACAGGACCCTGTCCTCTTCAGCGGCACCATCAGATTCAACCTGGACCCAGAGAAGAAATGCTCAGACAGCACACTCTGGGAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033123.8
ENSMUST00000210655.2
CDS CCA 72 bp CACAGAGGTGATGGCAGCCATGAAAGCCATCCCAGCTaGCATGTACAAATGGAGGTGGCGGGATTCTGTCAC +
Preference number: 6 (lower is better)
Translates to: HRGDGSHESHPS*HVQMEVAGFCH
Trigger: GTGACAGAATCCCGCCACCTCCATTTGTACATGCCAGCTGGGATGGCTTTCATGGCTGCCATCACCTCTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033123.8
CDS CCA 72 bp TGCCTGTTCATGAGGGTCTTCCAATGCTCAAAGAGCTaGCACTCAGACCTCTGGAAGTCCTTGAGCGTCCCC +
Preference number: 6 (lower is better)
Translates to: CLFMRVFQCSKS*HSDLWKSLSVP
Trigger: GGGGACGCTCAAGGACTTCCAGAGGTCTGAGTGCCAGCTCTTTGAGCATTGGAAGACCCTCATGAACAGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033123.8
ENSMUST00000210655.2
CDS CAA 90 bp AGAGAGAGAGAGGCAAAGGCCACCGAGGGTGAGAAGTCTGACTCTTaGAAGAAGCTGACGTGGCCCACAAAGGTAATGAGGACGGCAGCA +
Preference number: 6 (lower is better)
Translates to: REREAKATEGEKSDS*KKLTWPTKVMRTAA
Trigger: TGCTGCCGTCCTCATTACCTTTGTGGGCCACGTCAGCTTCTTCAAAGAGTCAGACTTCTCACCCTCGGTGGCCTTTGCCTCTCTCTCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033123.8
CDS TCA 72 bp TACTTAGTGCAGGCCCGCCATGGGATCTTGGCTCGCTaGTGCAGCACCGAAGATAAGTTGTCATCTTCCTCG +
Preference number: 6 (lower is better)
Translates to: YLVQARHGILAR*CSTEDKLSSSS
Trigger: CGAGGAAGATGACAACTTATCTTCGGTGCTGCATCAGCGAGCCAAGATCCCATGGCGGGCCTGCACTAAGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033123.8
ENSMUST00000210655.2
CDS TCA 72 bp CTGGGCGATCTCCAGAGCCTCCCAGAGTGTGCTGTCTaGGCATTTCTTCTCTGGGTCCAGGTTGAATCTGAT +
Preference number: 6 (lower is better)
Translates to: LGDLQSLPECAV*AFLLWVQVESD
Trigger: ATCAGATTCAACCTGGACCCAGAGAAGAAATGCTCAGACAGCACACTCTGGGAGGCTCTGGAGATCGCCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033123.8
ENSMUST00000210655.2
CDS GCA 72 bp CAGCCTTTCATTGGAATATTCCAGGGTGCTCCGCTGTaGCTGGGAGAGCTTGGTGGCCACAAAGTACTGTAC +
Preference number: 6 (lower is better)
Translates to: QPFIGIFQGAPL*LGELGGHKVLY
Trigger: GTACAGTACTTTGTGGCCACCAAGCTCTCCCAGGCACAGCGGAGCACCCTGGAATATTCCAATGAAAGGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033123.8
CDS GCA 72 bp TGTCCACTCCACAGTGACAGAGGTGACAAGGCACAGTaGAATTCCCAGGCTGCAGAGCACGGTGAATACCAT +
Preference number: 6 (lower is better)
Translates to: CPLHSDRGDKAQ*NSQAAEHGEYH
Trigger: ATGGTATTCACCGTGCTCTGCAGCCTGGGAATTGCACTGTGCCTTGTCACCTCTGTCACTGTGGAGTGGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033123.8
ENSMUST00000210655.2
CDS CCA 72 bp ATGAAAGCCATCCCAGCTGGCATGTACAAATGGAGGTaGCGGGATTCTGTCACCCCATCAGACAGGATACCC +
Preference number: 6 (lower is better)
Translates to: MKAIPAGMYKWR*RDSVTPSDRIP
Trigger: GGGTATCCTGTCTGATGGGGTGACAGAATCCCGCCACCTCCATTTGTACATGCCAGCTGGGATGGCTTTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033123.8
CDS CCA 72 bp GAGGGTGAGAAGTCTGACTCTTTGAAGAAGCTGACGTaGCCCACAAAGGTAATGAGGACGGCAGCAATGGGG +
Preference number: 6 (lower is better)
Translates to: EGEKSDSLKKLT*PTKVMRTAAMG
Trigger: CCCCATTGCTGCCGTCCTCATTACCTTTGTGGGCCACGTCAGCTTCTTCAAAGAGTCAGACTTCTCACCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033123.8
CDS CCA 72 bp TCAAGGATGCCAGCCTGCATCAGGTGGTCGCTCAGATaGACATCCAGAGCTGAGAAAGGGTCATCCAAGAAG +
Preference number: 6 (lower is better)
Translates to: SRMPACIRWSLR*TSRAEKGSSKK
Trigger: CTTCTTGGATGACCCTTTCTCAGCTCTGGATGTCCATCTGAGCGACCACCTGATGCAGGCTGGCATCCTTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033123.8
ENSMUST00000210655.2
CDS CCA 72 bp CACAGAGTAGAGTGGATCGGCTCAGACACTCCAGCGTaGATGGGATGTGCTGGTCAATGGTGTTACAGTCAG +
Preference number: 6 (lower is better)
Translates to: HRVEWIGSDTPA*MGCAGQWCYSQ
Trigger: CTGACTGTAACACCATTGACCAGCACATCCCATCCACGCTGGAGTGTCTGAGCCGATCCACTCTACTCTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033123.8
ENSMUST00000210655.2
CDS CAA 72 bp CAGAAGATGTTCTCCCACGCGTACAGTTTGAGCAGTTaGATGCCCCGGAGCATCTCGTTGGTCTGCTTCAGC +
Preference number: 6 (lower is better)
Translates to: QKMFSHAYSLSS*MPRSISLVCFS
Trigger: GCTGAAGCAGACCAACGAGATGCTCCGGGGCATCAAACTGCTCAAACTGTACGCGTGGGAGAACATCTTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033123.8
CDS CAA 72 bp GAGGCAAAGGCCACCGAGGGTGAGAAGTCTGACTCTTaGAAGAAGCTGACGTGGCCCACAAAGGTAATGAGG +
Preference number: 6 (lower is better)
Translates to: EAKATEGEKSDS*KKLTWPTKVMR
Trigger: CCTCATTACCTTTGTGGGCCACGTCAGCTTCTTCAAAGAGTCAGACTTCTCACCCTCGGTGGCCTTTGCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033123.8
CDS CAA 72 bp AGGAACTCACTCAGCTTTTGCACACTCACTAGGGCCTaGACGGTGGACCGAACCACACTAGACAGCAGGAAC +
Preference number: 6 (lower is better)
Translates to: RNSLSFCTLTRA*TVDRTTLDSRN
Trigger: GTTCCTGCTGTCTAGTGTGGTTCGGTCCACCGTCAAGGCCCTAGTGAGTGTGCAAAAGCTGAGTGAGTTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033123.8
CDS CAA 72 bp TTTCAGGAGTGTGTGGATGCGCTTCACAGCCCCCAATaGGATCTCCATGTCTGCCAGGTTCCTCACCATCCA +
Preference number: 6 (lower is better)
Translates to: FQECVDALHSPQ*DLHVCQVPHHP
Trigger: TGGATGGTGAGGAACCTGGCAGACATGGAGATCCAATTGGGGGCTGTGAAGCGCATCCACACACTCCTGAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000033123.8
ENSMUST00000210655.2
CDS CAA 90 bp ACCCTCGAGCAGAAGATGTTCTCCCACGCGTACAGTTTGAGCAGTTaGATGCCCCGGAGCATCTCGTTGGTCTGCTTCAGCCTTTCATTG +
Preference number: 6 (lower is better)
Translates to: TLEQKMFSHAYSLSS*MPRSISLVCFSLSL
Trigger: CAATGAAAGGCTGAAGCAGACCAACGAGATGCTCCGGGGCATCAAACTGCTCAAACTGTACGCGTGGGAGAACATCTTCTGCTCGAGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033123.8
CDS CAA 90 bp TGCCTCAGTTTTCAGGAGTGTGTGGATGCGCTTCACAGCCCCCAATaGGATCTCCATGTCTGCCAGGTTCCTCACCATCCAGTTGAGGTA +
Preference number: 6 (lower is better)
Translates to: CLSFQECVDALHSPQ*DLHVCQVPHHPVEV
Trigger: TACCTCAACTGGATGGTGAGGAACCTGGCAGACATGGAGATCCAATTGGGGGCTGTGAAGCGCATCCACACACTCCTGAAAACTGAGGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000033123.8
ENSMUST00000210655.2
CDS GCA 72 bp CATAGCTCTCTGCCTCAGTTTTCAGGAGTGTGTGGATaGGCTTCACAGCCCCCAATTGGATCTCCATGTCTG +
Preference number: 6 (lower is better)
Translates to: HSSLPQFSGVCG*ASQPPIGSPCL
Trigger: CAGACATGGAGATCCAATTGGGGGCTGTGAAGCGCATCCACACACTCCTGAAAACTGAGGCAGAGAGCTATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000033123.8
ENSMUST00000210655.2
CDS CCA 72 bp CTTTCATTGGAATATTCCAGGGTGCTCCGCTGTGCCTaGGAGAGCTTGGTGGCCACAAAGTACTGTACAGGA +
Preference number: 6 (lower is better)
Translates to: LSLEYSRVLRCA*ESLVATKYCTG
Trigger: TCCTGTACAGTACTTTGTGGCCACCAAGCTCTCCCAGGCACAGCGGAGCACCCTGGAATATTCCAATGAAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033123.8
CDS CAA 90 bp CTTTCATTGGAATATTCCAGGGTGCTCCGCTGTGCCTGGGAGAGCTaGGTGGCCACAAAGTACTGTACAGGAGCCAGCAGAATGATGACA +
Preference number: 6 (lower is better)
Translates to: LSLEYSRVLRCAWES*VATKYCTGASRMMT
Trigger: TGTCATCATTCTGCTGGCTCCTGTACAGTACTTTGTGGCCACCAAGCTCTCCCAGGCACAGCGGAGCACCCTGGAATATTCCAATGAAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033123.8
CDS CAA 90 bp CAGGAACAGAAGTACAGCCAAGACATAGGCGTTGCCCAGGAACTCTaGGGACGAGACAAAGTAAACCCCAAGAAACTGTGTCTTGGGCTG +
Preference number: 6 (lower is better)
Translates to: QEQKYSQDIGVAQEL*GRDKVNPKKLCLGL
Trigger: CAGCCCAAGACACAGTTTCTTGGGGTTTACTTTGTCTCGTCCCAAGAGTTCCTGGGCAACGCCTATGTCTTGGCTGTACTTCTGTTCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033123.8
CDS CAA 90 bp CTTCAGCACGGGCTTCAGGGAGCTGTCATAGCGCACACTCAGGTTTaGAATTTGAATCTTCCCTTGGTCTGGCCAGTTCTTGGGGATCAA +
Preference number: 6 (lower is better)
Translates to: LQHGLQGAVIAHTQV*NLNLPLVWPVLGDQ
Trigger: TTGATCCCCAAGAACTGGCCAGACCAAGGGAAGATTCAAATTCAAAACCTGAGTGTGCGCTATGACAGCTCCCTGAAGCCCGTGCTGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033123.8
ENSMUST00000210655.2
CDS TCA 72 bp GGATGGGATGTGCTGGTCAATGGTGTTACAGTCAGATaGAAATCTGTTCAGGATACTCCCCAGGGGCGTGGT +
Preference number: 6 (lower is better)
Translates to: GWDVLVNGVTVR*KSVQDTPQGRG
Trigger: ACCACGCCCCTGGGGAGTATCCTGAACAGATTTTCATCTGACTGTAACACCATTGACCAGCACATCCCATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033123.8
ENSMUST00000210655.2
CDS TCA 72 bp CAGGTTGCAGATCTGCCCAGCCGTCATCTCCCCCATTaGCAGGTTGGAAGTAGACAAGTGCATGATCTTATT +
Preference number: 6 (lower is better)
Translates to: QVADLPSRHLPH*QVGSRQVHDLI
Trigger: AATAAGATCATGCACTTGTCTACTTCCAACCTGTCAATGGGGGAGATGACGGCTGGGCAGATCTGCAACCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000033123.8
CDS CCA 72 bp TTTGAATTTGAATCTTCCCTTGGTCTGGCCAGTTCTTaGGGATCAATGACGGTGCTAGGAGCCCCTCATAGC +
Preference number: 6 (lower is better)
Translates to: FEFESSLGLASS*GSMTVLGAPHS
Trigger: GCTATGAGGGGCTCCTAGCACCGTCATTGATCCCCAAGAACTGGCCAGACCAAGGGAAGATTCAAATTCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033123.8
ENSMUST00000210655.2
CDS CAA 72 bp CAGGGAGCTGTCATAGCGCACACTCAGGTTTTGAATTaGAATCTTCCCTTGGTCTGGCCAGTTCTTGGGGAT +
Preference number: 6 (lower is better)
Translates to: QGAVIAHTQVLN*NLPLVWPVLGD
Trigger: ATCCCCAAGAACTGGCCAGACCAAGGGAAGATTCAAATTCAAAACCTGAGTGTGCGCTATGACAGCTCCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033123.8
ENSMUST00000210655.2
CDS CAA 72 bp GGGCTTCAGGGAGCTGTCATAGCGCACACTCAGGTTTaGAATTTGAATCTTCCCTTGGTCTGGCCAGTTCTT +
Preference number: 6 (lower is better)
Translates to: GLQGAVIAHTQV*NLNLPLVWPVL
Trigger: AAGAACTGGCCAGACCAAGGGAAGATTCAAATTCAAAACCTGAGTGTGCGCTATGACAGCTCCCTGAAGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033123.8
ENSMUST00000210655.2
CDS GCA 72 bp AAAGTACTGTACAGGAGCCAGCAGAATGATGACAGCTaGTCCAATCAAGGCACTGACCCCAAGGATGTAGTA +
Preference number: 6 (lower is better)
Translates to: KVLYRSQQNDDS*SNQGTDPKDVV
Trigger: TACTACATCCTTGGGGTCAGTGCCTTGATTGGAGCAGCTGTCATCATTCTGCTGGCTCCTGTACAGTACTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033123.8
CDS CAA 72 bp AAGTACAGCCAAGACATAGGCGTTGCCCAGGAACTCTaGGGACGAGACAAAGTAAACCCCAAGAAACTGTGT +
Preference number: 6 (lower is better)
Translates to: KYSQDIGVAQEL*GRDKVNPKKLC
Trigger: ACACAGTTTCTTGGGGTTTACTTTGTCTCGTCCCAAGAGTTCCTGGGCAACGCCTATGTCTTGGCTGTACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033123.8
CDS CAA 72 bp TACAGTTTGAGCAGTTTGATGCCCCGGAGCATCTCGTaGGTCTGCTTCAGCCTTTCATTGGAATATTCCAGG +
Preference number: 6 (lower is better)
Translates to: YSLSSLMPRSIS*VCFSLSLEYSR
Trigger: CCTGGAATATTCCAATGAAAGGCTGAAGCAGACCAACGAGATGCTCCGGGGCATCAAACTGCTCAAACTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033123.8