RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ABCC4 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000032849

Ensembl transcript IDs: ENSMUST00000036554.14, ENSMUST00000166646.2

Found 276 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GTACACGAGCCGCCCAGAGGGACTCACAGATGCAAGGGGGAGGGGTaGCTAACCTGCGCTCGGTCTCCCATTCTGAGAAAGCAGAAGTTG +
Preference number: 1 (lower is better)
Translates to: VHEPPRGTHRCKGEG*LTCARSPILRKQKL
Trigger: CAACTTCTGCTTTCTCAGAATGGGAGACCGAGCGCAGGTTAGGCACCCCTCCCCCTTGCATCTGTGAGTCCCTCTGGGCGGCTCGTGTAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
3UTR TCA 90 bp AGTAAAGTCGGAGGGAAAAATCCAAAGACAACAGTCTCTCGTCTGTaGAGGATCTGTGGCAGAAAGAAAGGAAACCAGGTGTGCTGTAGT +
Preference number: 1 (lower is better)
Translates to: SKVGGKNPKTTVSRL*RICGRKKGNQVCCS
Trigger: ACTACAGCACACCTGGTTTCCTTTCTTTCTGCCACAGATCCTTCACAGACGAGAGACTGTTGTCTTTGGATTTTTCCCTCCGACTTTACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
3UTR GCA 90 bp TATGACAGTAAAACCTTTAGTAACTTGAACCCTGACATAGACCCTTaGCACCACCACCCAGAAAATATTCAGACCTATAGTTACACGGAG +
Preference number: 1 (lower is better)
Translates to: YDSKTFSNLNPDIDP*HHHPENIQTYSYTE
Trigger: CTCCGTGTAACTATAGGTCTGAATATTTTCTGGGTGGTGGTGGCAAGGGTCTATGTCAGGGTTCAAGTTACTAAAGGTTTTACTGTCATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
3UTR-3UTR TCA 90 bp CTTGAGACTGTTAAGGCACAAAACCTGGTAGACGCTGCTGTTGGTGGCCTGCACACAGTCTCTCGTCTGTaGAGGATCTGTGGCAGAAAG +
Preference number: 2 (lower is better)
Translates to: LETVKAQNLVDAAVGGLHTVSRL*RICGRK
Trigger: CTTTCTGCCACAGATCCTTCACAGACGAGAGACTGT...GTGCAGGCCACCAACAGCAGCGTCTACCAGGTTTTGTGCCTTAACAGTCTCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
3UTR-3UTR GCA 90 bp CCATTAGTGGTCAGAGCTAAACTAATCTGGATGGGCTTTAGAAAGCGTGGCTTGAGAGGGACTCACAGATaGAAGGGGGAGGGGTGCCTA +
Preference number: 2 (lower is better)
Translates to: PLVVRAKLIWMGFRKRGLRGTHR*KGEGCL
Trigger: TAGGCACCCCTCCCCCTTGCATCTGTGAGTCCCTCT...CAAGCCACGCTTTCTAAAGCCCATCCAGATTAGTTTAGCTCTGACCACTAATGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
3UTR-3UTR TCA 90 bp AGCTCAAAGACAGCAGGGAGACGAACTGGCAACTGCACACAGTCTTCAAGTAAAACAGTCTCTCGTCTGTaGAGGATCTGTGGCAGAAAG +
Preference number: 2 (lower is better)
Translates to: SSKTAGRRTGNCTQSSSKTVSRL*RICGRK
Trigger: CTTTCTGCCACAGATCCTTCACAGACGAGAGACTGT...TTTACTTGAAGACTGTGTGCAGTTGCCAGTTCGTCTCCCTGCTGTCTTTGAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
3UTR-3UTR GCA 90 bp CCATTAGTGGTCAGAGCTAAACTAATCTGGATGGGCTTTAGAAAGCGTGGCTTGCTGCTGTTGGTGGCCTaGACCTCAGAACTGGATTTG +
Preference number: 2 (lower is better)
Translates to: PLVVRAKLIWMGFRKRGLLLLVA*TSELDL
Trigger: CAAATCCAGTTCTGAGGTGCAGGCCACCAACAGCAG...CAAGCCACGCTTTCTAAAGCCCATCCAGATTAGTTTAGCTCTGACCACTAATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
3UTR-3UTR CCA 90 bp CTTGAGACTGTTAAGGCACAAAACCTGGTAGACGCTGCTGTTGGTGGCCTGCACTCTGTGAAGGATCTGTaGCAGAAAGAAAGGAAACCA +
Preference number: 2 (lower is better)
Translates to: LETVKAQNLVDAAVGGLHSVKDL*QKERKP
Trigger: TGGTTTCCTTTCTTTCTGCCACAGATCCTTCACAGA...GTGCAGGCCACCAACAGCAGCGTCTACCAGGTTTTGTGCCTTAACAGTCTCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
3UTR-3UTR TCA 90 bp CTTGAGACTGTTAAGGCACAAAACCTGGTAGACGCTGCTGTTGGTGGCCTGCACCATGTTGTTAGAACCTaGAATCACAGAGTAAAGTCG +
Preference number: 2 (lower is better)
Translates to: LETVKAQNLVDAAVGGLHHVVRT*NHRVKS
Trigger: CGACTTTACTCTGTGATTTCAGGTTCTAACAACATG...GTGCAGGCCACCAACAGCAGCGTCTACCAGGTTTTGTGCCTTAACAGTCTCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
3UTR-3UTR CCA 90 bp CCATTAGTGGTCAGAGCTAAACTAATCTGGATGGGCTTTAGAAAGCGTGGCTTGCCTGCACCTCAGAACTaGATTTGTAAAGAACAGCAG +
Preference number: 2 (lower is better)
Translates to: PLVVRAKLIWMGFRKRGLPAPQN*ICKEQQ
Trigger: CTGCTGTTCTTTACAAATCCAGTTCTGAGGTGCAGG...CAAGCCACGCTTTCTAAAGCCCATCCAGATTAGTTTAGCTCTGACCACTAATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
3UTR-3UTR TCA 90 bp CCATTAGTGGTCAGAGCTAAACTAATCTGGATGGGCTTTAGAAAGCGTGGCTTGCATGTTGTTAGAACCTaGAATCACAGAGTAAAGTCG +
Preference number: 2 (lower is better)
Translates to: PLVVRAKLIWMGFRKRGLHVVRT*NHRVKS
Trigger: CGACTTTACTCTGTGATTTCAGGTTCTAACAACATG...CAAGCCACGCTTTCTAAAGCCCATCCAGATTAGTTTAGCTCTGACCACTAATGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
3UTR-3UTR CCA 90 bp CCATTAGTGGTCAGAGCTAAACTAATCTGGATGGGCTTTAGAAAGCGTGGCTTGTTAATATTATGCATTTaGGAGTCACAGTCTAGGGGA +
Preference number: 2 (lower is better)
Translates to: PLVVRAKLIWMGFRKRGLLILCI*ESQSRG
Trigger: TCCCCTAGACTGTGACTCCCAAATGCATAATATTAA...CAAGCCACGCTTTCTAAAGCCCATCCAGATTAGTTTAGCTCTGACCACTAATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
3UTR GCA 72 bp CGATCAGTACACGAGCCGCCCAGAGGGACTCACAGATaGAAGGGGGAGGGGTGCCTAACCTGCGCTCGGTCT +
Preference number: 3 (lower is better)
Translates to: RSVHEPPRGTHR*KGEGCLTCARS
Trigger: AGACCGAGCGCAGGTTAGGCACCCCTCCCCCTTGCATCTGTGAGTCCCTCTGGGCGGCTCGTGTACTGATCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
3UTR GCA 72 bp CCGCCCAGAGGGACTCACAGATGCAAGGGGGAGGGGTaGCTAACCTGCGCTCGGTCTCCCATTCTGAGAAAG +
Preference number: 3 (lower is better)
Translates to: PPRGTHRCKGEG*LTCARSPILRK
Trigger: CTTTCTCAGAATGGGAGACCGAGCGCAGGTTAGGCACCCCTCCCCCTTGCATCTGTGAGTCCCTCTGGGCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
3UTR CCA 72 bp AGAGTCAAACAGTCACTGTGCTCGGCGTGGTTTTGGTaGTTTGGTGTAGGTGTGCTCTTTAAGGTTCCACTG +
Preference number: 3 (lower is better)
Translates to: RVKQSLCSAWFW*FGVGVLFKVPL
Trigger: CAGTGGAACCTTAAAGAGCACACCTACACCAAACCACCAAAACCACGCCGAGCACAGTGACTGTTTGACTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
3UTR TCA 72 bp GGAGGGAAAAATCCAAAGACAACAGTCTCTCGTCTGTaGAGGATCTGTGGCAGAAAGAAAGGAAACCAGGTG +
Preference number: 3 (lower is better)
Translates to: GGKNPKTTVSRL*RICGRKKGNQV
Trigger: CACCTGGTTTCCTTTCTTTCTGCCACAGATCCTTCACAGACGAGAGACTGTTGTCTTTGGATTTTTCCCTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
3UTR-3UTR CAA 90 bp CCATTAGTGGTCAGAGCTAAACTAATCTGGATGGGCTTTAGAAAGCGTGGCTTGAAACGACAGGCCATGTaGTTAGAACCTGAAATCACA +
Preference number: 3 (lower is better)
Translates to: PLVVRAKLIWMGFRKRGLKRQAM*LEPEIT
Trigger: TGTGATTTCAGGTTCTAACAACATGGCCTGTCGTTT...CAAGCCACGCTTTCTAAAGCCCATCCAGATTAGTTTAGCTCTGACCACTAATGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
3UTR TCA 72 bp GGAGTACAACAGGTCCTAGGAAGTGTTGTGGTTTGTTaGTTGACTAATCACAAGGTCCTTAAGACCTGCCAT +
Preference number: 3 (lower is better)
Translates to: GVQQVLGSVVVC*LTNHKVLKTCH
Trigger: ATGGCAGGTCTTAAGGACCTTGTGATTAGTCAATCAACAAACCACAACACTTCCTAGGACCTGTTGTACTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
3UTR GCA 72 bp AAAACCTTTAGTAACTTGAACCCTGACATAGACCCTTaGCACCACCACCCAGAAAATATTCAGACCTATAGT +
Preference number: 3 (lower is better)
Translates to: KTFSNLNPDIDP*HHHPENIQTYS
Trigger: ACTATAGGTCTGAATATTTTCTGGGTGGTGGTGGCAAGGGTCTATGTCAGGGTTCAAGTTACTAAAGGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS-3UTR CCA 90 bp CTTGAGACTGTTAAGGCACAAAACCTGGTAGACGCTGCTGTTGGTGGCCTGCACCGCGCGAGCAGAGGTTaGCGTCCTGCAGCGGGTTGG +
Preference number: 4 (lower is better)
Translates to: LETVKAQNLVDAAVGGLHRASRG*RPAAGW
Trigger: CCAACCCGCTGCAGGACGCCAACCTCTGCTCGCGCG...GTGCAGGCCACCAACAGCAGCGTCTACCAGGTTTTGTGCCTTAACAGTCTCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS-3UTR GCA 90 bp CTTGAGACTGTTAAGGCACAAAACCTGGTAGACGCTGCTGTTGGTGGCCTGCACTGCCTGCGTGTTCTCTaGGTCTTGGCCCTCTGGGGC +
Preference number: 4 (lower is better)
Translates to: LETVKAQNLVDAAVGGLHCLRVL*VLALWG
Trigger: GCCCCAGAGGGCCAAGACGCAGAGAACACGCAGGCA...GTGCAGGCCACCAACAGCAGCGTCTACCAGGTTTTGTGCCTTAACAGTCTCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS-3UTR TCA 90 bp CTTGAGACTGTTAAGGCACAAAACCTGGTAGACGCTGCTGTTGGTGGCCTGCACTTTCCCCTCGGGTTCTaGCAGCCTGAAGAGGGCCGA +
Preference number: 4 (lower is better)
Translates to: LETVKAQNLVDAAVGGLHFPLGF*QPEEGR
Trigger: TCGGCCCTCTTCAGGCTGTCAGAACCCGAGGGGAAA...GTGCAGGCCACCAACAGCAGCGTCTACCAGGTTTTGTGCCTTAACAGTCTCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS-3UTR CCA 90 bp AGCTCAAAGACAGCAGGGAGACGAACTGGCAACTGCACACAGTCTTCAAGTAAAACGATGACTCCCTCGTaGGGCCAGCCTGGGGGTGGG +
Preference number: 4 (lower is better)
Translates to: SSKTAGRRTGNCTQSSSKTMTPS*GQPGGG
Trigger: CCCACCCCCAGGCTGGCCCCACGAGGGAGTCATCGT...TTTACTTGAAGACTGTGTGCAGTTGCCAGTTCGTCTCCCTGCTGTCTTTGAGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS-3UTR CCA 90 bp CCATTAGTGGTCAGAGCTAAACTAATCTGGATGGGCTTTAGAAAGCGTGGCTTGCGCGCGAGCAGAGGTTaGCGTCCTGCAGCGGGTTGG +
Preference number: 4 (lower is better)
Translates to: PLVVRAKLIWMGFRKRGLRASRG*RPAAGW
Trigger: CCAACCCGCTGCAGGACGCCAACCTCTGCTCGCGCG...CAAGCCACGCTTTCTAAAGCCCATCCAGATTAGTTTAGCTCTGACCACTAATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS-3UTR CCA 90 bp CTTGAGACTGTTAAGGCACAAAACCTGGTAGACGCTGCTGTTGGTGGCCTGCACTTCACCCGAGCTTTCTaGCCTCCACTCAGCGTGGCT +
Preference number: 4 (lower is better)
Translates to: LETVKAQNLVDAAVGGLHFTRAF*PPLSVA
Trigger: AGCCACGCTGAGTGGAGGCCAGAAAGCTCGGGTGAA...GTGCAGGCCACCAACAGCAGCGTCTACCAGGTTTTGTGCCTTAACAGTCTCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS-3UTR CCA 90 bp CCATTAGTGGTCAGAGCTAAACTAATCTGGATGGGCTTTAGAAAGCGTGGCTTGCTCGTGGGGCCAGCCTaGGGGTGGGCGCTTCTTGCA +
Preference number: 4 (lower is better)
Translates to: PLVVRAKLIWMGFRKRGLLVGPA*GWALLA
Trigger: TGCAAGAAGCGCCCACCCCCAGGCTGGCCCCACGAG...CAAGCCACGCTTTCTAAAGCCCATCCAGATTAGTTTAGCTCTGACCACTAATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS-3UTR CCA 90 bp CCATTAGTGGTCAGAGCTAAACTAATCTGGATGGGCTTTAGAAAGCGTGGCTTGACGATGACTCCCTCGTaGGGCCAGCCTGGGGGTGGG +
Preference number: 4 (lower is better)
Translates to: PLVVRAKLIWMGFRKRGLTMTPS*GQPGGG
Trigger: CCCACCCCCAGGCTGGCCCCACGAGGGAGTCATCGT...CAAGCCACGCTTTCTAAAGCCCATCCAGATTAGTTTAGCTCTGACCACTAATGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS-3UTR TCA 90 bp CTTGAGACTGTTAAGGCACAAAACCTGGTAGACGCTGCTGTTGGTGGCCTGCACTGGATTCCAGGCGCTTaGCATCCCGTGACGTCTCTA +
Preference number: 4 (lower is better)
Translates to: LETVKAQNLVDAAVGGLHWIPGA*HPVTSL
Trigger: TAGAGACGTCACGGGATGTCAAGCGCCTGGAATCCA...GTGCAGGCCACCAACAGCAGCGTCTACCAGGTTTTGTGCCTTAACAGTCTCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS-3UTR TCA 90 bp CTTGAGACTGTTAAGGCACAAAACCTGGTAGACGCTGCTGTTGGTGGCCTGCACGCATCAAACAGCTCCTaGCACCTCTCCTCAGCTTTG +
Preference number: 4 (lower is better)
Translates to: LETVKAQNLVDAAVGGLHASNSS*HLSSAL
Trigger: CAAAGCTGAGGAGAGGTGTCAGGAGCTGTTTGATGC...GTGCAGGCCACCAACAGCAGCGTCTACCAGGTTTTGTGCCTTAACAGTCTCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS-3UTR TCA 90 bp AGCTCAAAGACAGCAGGGAGACGAACTGGCAACTGCACACAGTCTTCAAGTAAATTTCCCCTCGGGTTCTaGCAGCCTGAAGAGGGCCGA +
Preference number: 4 (lower is better)
Translates to: SSKTAGRRTGNCTQSSSKFPLGF*QPEEGR
Trigger: TCGGCCCTCTTCAGGCTGTCAGAACCCGAGGGGAAA...TTTACTTGAAGACTGTGTGCAGTTGCCAGTTCGTCTCCCTGCTGTCTTTGAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS-3UTR TCA 90 bp AGCTCAAAGACAGCAGGGAGACGAACTGGCAACTGCACACAGTCTTCAAGTAAAGTTTTGCTGTTTCGGTaGGGGCAGCGGCTTCGCCCT +
Preference number: 4 (lower is better)
Translates to: SSKTAGRRTGNCTQSSSKVLLFR*GQRLRP
Trigger: AGGGCGAAGCCGCTGCCCTCACCGAAACAGCAAAAC...TTTACTTGAAGACTGTGTGCAGTTGCCAGTTCGTCTCCCTGCTGTCTTTGAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS-3UTR GCA 90 bp CTTGAGACTGTTAAGGCACAAAACCTGGTAGACGCTGCTGTTGGTGGCCTGCACCACAGTTGGAACAGGTaGTTGCCCACTTCTGCATCG +
Preference number: 4 (lower is better)
Translates to: LETVKAQNLVDAAVGGLHHSWNR*LPTSAS
Trigger: CGATGCAGAAGTGGGCAAGCACCTGTTCCAACTGTG...GTGCAGGCCACCAACAGCAGCGTCTACCAGGTTTTGTGCCTTAACAGTCTCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS-3UTR CCA 90 bp TCCAAAGACAACAGTCTCTCGTCTGTGAAGGATCTGTGGCAGAAAGAAAGGAAAGAGTGTCGGGGTTCCTaGGGCTGTGGAGGGCTCTGC +
Preference number: 4 (lower is better)
Translates to: SKDNSLSSVKDLWQKERKECRGS*GCGGLC
Trigger: GCAGAGCCCTCCACAGCCCCAGGAACCCCGACACTC...TTTCCTTTCTTTCTGCCACAGATCCTTCACAGACGAGAGACTGTTGTCTTTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS-3UTR CCA 90 bp CTTGAGACTGTTAAGGCACAAAACCTGGTAGACGCTGCTGTTGGTGGCCTGCACATGGTCCAGAGTCCCTaGAGGGAGGACGATAAATGG +
Preference number: 4 (lower is better)
Translates to: LETVKAQNLVDAAVGGLHMVQSP*REDDKW
Trigger: CCATTTATCGTCCTCCCTCCAGGGACTCTGGACCAT...GTGCAGGCCACCAACAGCAGCGTCTACCAGGTTTTGTGCCTTAACAGTCTCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS-3UTR CCA 90 bp AAAATCCAAAGACAACAGTCTCTCGTCTGTGAAGGATCTGTGGCAGAAAGAAAGCTCGTGGGGCCAGCCTaGGGGTGGGCGCTTCTTGCA +
Preference number: 4 (lower is better)
Translates to: KIQRQQSLVCEGSVAERKLVGPA*GWALLA
Trigger: TGCAAGAAGCGCCCACCCCCAGGCTGGCCCCACGAG...CTTTCTTTCTGCCACAGATCCTTCACAGACGAGAGACTGTTGTCTTTGGATTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS-3UTR TCA 90 bp CTTGAGACTGTTAAGGCACAAAACCTGGTAGACGCTGCTGTTGGTGGCCTGCACAGTTTTACTCCGCAGTaGCGAGAACAGCTTCCCGAT +
Preference number: 4 (lower is better)
Translates to: LETVKAQNLVDAAVGGLHSFTPQ*REQLPD
Trigger: ATCGGGAAGCTGTTCTCGTCACTGCGGAGTAAAACT...GTGCAGGCCACCAACAGCAGCGTCTACCAGGTTTTGTGCCTTAACAGTCTCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS-3UTR TCA 90 bp AGCTCAAAGACAGCAGGGAGACGAACTGGCAACTGCACACAGTCTTCAAGTAAAACGGGAAGAAGAGGGTaGCTGTCAACCGAACGGCAC +
Preference number: 4 (lower is better)
Translates to: SSKTAGRRTGNCTQSSSKTGRRG*LSTERH
Trigger: GTGCCGTTCGGTTGACAGTCACCCTCTTCTTCCCGT...TTTACTTGAAGACTGTGTGCAGTTGCCAGTTCGTCTCCCTGCTGTCTTTGAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS-3UTR TCA 90 bp CTTGAGACTGTTAAGGCACAAAACCTGGTAGACGCTGCTGTTGGTGGCCTGCACTTCTCGTGCAACGCCTaGCAGATACACAGTTGGAAC +
Preference number: 4 (lower is better)
Translates to: LETVKAQNLVDAAVGGLHFSCNA*QIHSWN
Trigger: GTTCCAACTGTGTATCTGTCAGGCGTTGCACGAGAA...GTGCAGGCCACCAACAGCAGCGTCTACCAGGTTTTGTGCCTTAACAGTCTCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS-3UTR GCA 90 bp CCATTAGTGGTCAGAGCTAAACTAATCTGGATGGGCTTTAGAAAGCGTGGCTTGCAGAGGTTGGCGTCCTaGAGCGGGTTGGGTTTCACC +
Preference number: 4 (lower is better)
Translates to: PLVVRAKLIWMGFRKRGLQRLAS*SGLGFT
Trigger: GGTGAAACCCAACCCGCTGCAGGACGCCAACCTCTG...CAAGCCACGCTTTCTAAAGCCCATCCAGATTAGTTTAGCTCTGACCACTAATGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS-3UTR GCA 90 bp AGCTCAAAGACAGCAGGGAGACGAACTGGCAACTGCACACAGTCTTCAAGTAAATATTGCTCCTCACGGTaGCCGAGAACACCCAGGGCT +
Preference number: 4 (lower is better)
Translates to: SSKTAGRRTGNCTQSSSKYCSSR*PRTPRA
Trigger: AGCCCTGGGTGTTCTCGGGCACCGTGAGGAGCAATA...TTTACTTGAAGACTGTGTGCAGTTGCCAGTTCGTCTCCCTGCTGTCTTTGAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS-3UTR GCA 90 bp TCCAAAGACAACAGTCTCTCGTCTGTGAAGGATCTGTGGCAGAAAGAAAGGAAATGCCTGCGTGTTCTCTaGGTCTTGGCCCTCTGGGGC +
Preference number: 4 (lower is better)
Translates to: SKDNSLSSVKDLWQKERKCLRVL*VLALWG
Trigger: GCCCCAGAGGGCCAAGACGCAGAGAACACGCAGGCA...TTTCCTTTCTTTCTGCCACAGATCCTTCACAGACGAGAGACTGTTGTCTTTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS-3UTR GCA 90 bp AGCTCAAAGACAGCAGGGAGACGAACTGGCAACTGCACACAGTCTTCAAGTAAATCGGGTTGCACTGCCTaGGTGTTCTCTGCGTCTTGG +
Preference number: 4 (lower is better)
Translates to: SSKTAGRRTGNCTQSSSKSGCTA*VFSASW
Trigger: CCAAGACGCAGAGAACACGCAGGCAGTGCAACCCGA...TTTACTTGAAGACTGTGTGCAGTTGCCAGTTCGTCTCCCTGCTGTCTTTGAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS-3UTR GCA 90 bp CTTGAGACTGTTAAGGCACAAAACCTGGTAGACGCTGCTGTTGGTGGCCTGCACTCTGGTGTTGTTCAGTaGACCTTGCTTGTTCGCCCA +
Preference number: 4 (lower is better)
Translates to: LETVKAQNLVDAAVGGLHSGVVQ*TLLVRP
Trigger: TGGGCGAACAAGCAAGGTGCACTGAACAACACCAGA...GTGCAGGCCACCAACAGCAGCGTCTACCAGGTTTTGTGCCTTAACAGTCTCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS-3UTR TCA 90 bp AGCTCAAAGACAGCAGGGAGACGAACTGGCAACTGCACACAGTCTTCAAGTAAAGGATCCTGGCATCCGTaGAAGCCGCAGTTTTACTCC +
Preference number: 4 (lower is better)
Translates to: SSKTAGRRTGNCTQSSSKGSWHP*KPQFYS
Trigger: GGAGTAAAACTGCGGCTTTCACGGATGCCAGGATCC...TTTACTTGAAGACTGTGTGCAGTTGCCAGTTCGTCTCCCTGCTGTCTTTGAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS-3UTR TCA 90 bp CTTGAGACTGTTAAGGCACAAAACCTGGTAGACGCTGCTGTTGGTGGCCTGCACTCCTCATGCCTGTTATaGCTTCATTCATGGTCCGGA +
Preference number: 4 (lower is better)
Translates to: LETVKAQNLVDAAVGGLHSSCLL*LHSWSG
Trigger: TCCGGACCATGAATGAAGTCATAACAGGCATGAGGA...GTGCAGGCCACCAACAGCAGCGTCTACCAGGTTTTGTGCCTTAACAGTCTCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS-3UTR TCA 90 bp AGCTCAAAGACAGCAGGGAGACGAACTGGCAACTGCACACAGTCTTCAAGTAAACCATGTTCATCCCTCTaGGGTAGGAGCTGCCCAGAA +
Preference number: 4 (lower is better)
Translates to: SSKTAGRRTGNCTQSSSKPCSSL*GRSCPE
Trigger: TTCTGGGCAGCTCCTACCTCAGAGGGATGAACATGG...TTTACTTGAAGACTGTGTGCAGTTGCCAGTTCGTCTCCCTGCTGTCTTTGAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS-3UTR TCA 90 bp TCCAAAGACAACAGTCTCTCGTCTGTGAAGGATCTGTGGCAGAAAGAAAGGAAACATTGTCGAAGACGATaGCTCCCTCGTGGGGCCAGC +
Preference number: 4 (lower is better)
Translates to: SKDNSLSSVKDLWQKERKHCRRR*LPRGAS
Trigger: GCTGGCCCCACGAGGGAGTCATCGTCTTCGACAATG...TTTCCTTTCTTTCTGCCACAGATCCTTCACAGACGAGAGACTGTTGTCTTTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS-3UTR GCA 90 bp CTTGAGACTGTTAAGGCACAAAACCTGGTAGACGCTGCTGTTGGTGGCCTGCACCCTGCCCACAGAAAGTaGAAGAAGATTGTCACTTGG +
Preference number: 4 (lower is better)
Translates to: LETVKAQNLVDAAVGGLHPAHRK*KKIVTW
Trigger: CCAAGTGACAATCTTCTTGCACTTTCTGTGGGCAGG...GTGCAGGCCACCAACAGCAGCGTCTACCAGGTTTTGTGCCTTAACAGTCTCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS-3UTR GCA 90 bp TCCAAAGACAACAGTCTCTCGTCTGTGAAGGATCTGTGGCAGAAAGAAAGGAAACTCCTCGGGTTGCACTaGCTGCGTGTTCTCTGCGTC +
Preference number: 4 (lower is better)
Translates to: SKDNSLSSVKDLWQKERKLLGLH*LRVLCV
Trigger: GACGCAGAGAACACGCAGGCAGTGCAACCCGAGGAG...TTTCCTTTCTTTCTGCCACAGATCCTTCACAGACGAGAGACTGTTGTCTTTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS-3UTR GCA 90 bp CTTGAGACTGTTAAGGCACAAAACCTGGTAGACGCTGCTGTTGGTGGCCTGCACGAAGTATACCTGTTTTaGTGTTTCGGTGAGGGCAGC +
Preference number: 4 (lower is better)
Translates to: LETVKAQNLVDAAVGGLHEVYLF*CFGEGS
Trigger: GCTGCCCTCACCGAAACAGCAAAACAGGTATACTTC...GTGCAGGCCACCAACAGCAGCGTCTACCAGGTTTTGTGCCTTAACAGTCTCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS-3UTR CCA 90 bp TCCAAAGACAACAGTCTCTCGTCTGTGAAGGATCTGTGGCAGAAAGAAAGGAAACGTCCTGCAGCGGGTTaGGTTTCACCTCGGTGTGCA +
Preference number: 4 (lower is better)
Translates to: SKDNSLSSVKDLWQKERKRPAAG*VSPRCA
Trigger: TGCACACCGAGGTGAAACCCAACCCGCTGCAGGACG...TTTCCTTTCTTTCTGCCACAGATCCTTCACAGACGAGAGACTGTTGTCTTTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS-3UTR CCA 90 bp AGCTCAAAGACAGCAGGGAGACGAACTGGCAACTGCACACAGTCTTCAAGTAAAGTGAGCACTGTGCACTaGGCAAACTTCTCCCGGATC +
Preference number: 4 (lower is better)
Translates to: SSKTAGRRTGNCTQSSSKVSTVH*ANFSRI
Trigger: GATCCGGGAGAAGTTTGCCCAGTGCACAGTGCTCAC...TTTACTTGAAGACTGTGTGCAGTTGCCAGTTCGTCTCCCTGCTGTCTTTGAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS-3UTR TCA 90 bp CCATTAGTGGTCAGAGCTAAACTAATCTGGATGGGCTTTAGAAAGCGTGGCTTGCCATGTTCATCCCTCTaGGGTAGGAGCTGCCCAGAA +
Preference number: 4 (lower is better)
Translates to: PLVVRAKLIWMGFRKRGLPCSSL*GRSCPE
Trigger: TTCTGGGCAGCTCCTACCTCAGAGGGATGAACATGG...CAAGCCACGCTTTCTAAAGCCCATCCAGATTAGTTTAGCTCTGACCACTAATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS-3UTR TCA 90 bp CCATTAGTGGTCAGAGCTAAACTAATCTGGATGGGCTTTAGAAAGCGTGGCTTGGGTCTGGATGACTGCTaGGACCAAATTGAGGCCTCG +
Preference number: 4 (lower is better)
Translates to: PLVVRAKLIWMGFRKRGLGLDDC*DQIEAS
Trigger: CGAGGCCTCAATTTGGTCTCAGCAGTCATCCAGACC...CAAGCCACGCTTTCTAAAGCCCATCCAGATTAGTTTAGCTCTGACCACTAATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS-3UTR TCA 90 bp TCCAAAGACAACAGTCTCTCGTCTGTGAAGGATCTGTGGCAGAAAGAAAGGAAAGGAGCAACGTCTGGATaGAGTCCAGGAACGTCAGGG +
Preference number: 4 (lower is better)
Translates to: SKDNSLSSVKDLWQKERKGATSG*SPGTSG
Trigger: CCCTGACGTTCCTGGACTTCATCCAGACGTTGCTCC...TTTCCTTTCTTTCTGCCACAGATCCTTCACAGACGAGAGACTGTTGTCTTTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS-3UTR TCA 90 bp CCATTAGTGGTCAGAGCTAAACTAATCTGGATGGGCTTTAGAAAGCGTGGCTTGTGGATTCCAGGCGCTTaGCATCCCGTGACGTCTCTA +
Preference number: 4 (lower is better)
Translates to: PLVVRAKLIWMGFRKRGLWIPGA*HPVTSL
Trigger: TAGAGACGTCACGGGATGTCAAGCGCCTGGAATCCA...CAAGCCACGCTTTCTAAAGCCCATCCAGATTAGTTTAGCTCTGACCACTAATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS-3UTR TCA 90 bp AAAATCCAAAGACAACAGTCTCTCGTCTGTGAAGGATCTGTGGCAGAAAGAAAGCATTGTCGAAGACGATaGCTCCCTCGTGGGGCCAGC +
Preference number: 4 (lower is better)
Translates to: KIQRQQSLVCEGSVAERKHCRRR*LPRGAS
Trigger: GCTGGCCCCACGAGGGAGTCATCGTCTTCGACAATG...CTTTCTTTCTGCCACAGATCCTTCACAGACGAGAGACTGTTGTCTTTGGATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS-3UTR TCA 90 bp CCATTAGTGGTCAGAGCTAAACTAATCTGGATGGGCTTTAGAAAGCGTGGCTTGCGTCCGTGTGCTCATTaGAGGGGTCCAGGTTTTTCC +
Preference number: 4 (lower is better)
Translates to: PLVVRAKLIWMGFRKRGLRPCAH*RGPGFS
Trigger: GGAAAAACCTGGACCCCTTCAATGAGCACACGGACG...CAAGCCACGCTTTCTAAAGCCCATCCAGATTAGTTTAGCTCTGACCACTAATGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS-3UTR GCA 90 bp AAAATCCAAAGACAACAGTCTCTCGTCTGTGAAGGATCTGTGGCAGAAAGAAAGCAGAGGTTGGCGTCCTaGAGCGGGTTGGGTTTCACC +
Preference number: 4 (lower is better)
Translates to: KIQRQQSLVCEGSVAERKQRLAS*SGLGFT
Trigger: GGTGAAACCCAACCCGCTGCAGGACGCCAACCTCTG...CTTTCTTTCTGCCACAGATCCTTCACAGACGAGAGACTGTTGTCTTTGGATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS-3UTR GCA 90 bp TCCAAAGACAACAGTCTCTCGTCTGTGAAGGATCTGTGGCAGAAAGAAAGGAAATATTGCTCCTCACGGTaGCCGAGAACACCCAGGGCT +
Preference number: 4 (lower is better)
Translates to: SKDNSLSSVKDLWQKERKYCSSR*PRTPRA
Trigger: AGCCCTGGGTGTTCTCGGGCACCGTGAGGAGCAATA...TTTCCTTTCTTTCTGCCACAGATCCTTCACAGACGAGAGACTGTTGTCTTTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS-3UTR GCA 90 bp AAAATCCAAAGACAACAGTCTCTCGTCTGTGAAGGATCTGTGGCAGAAAGAAAGCTCCTCGGGTTGCACTaGCTGCGTGTTCTCTGCGTC +
Preference number: 4 (lower is better)
Translates to: KIQRQQSLVCEGSVAERKLLGLH*LRVLCV
Trigger: GACGCAGAGAACACGCAGGCAGTGCAACCCGAGGAG...CTTTCTTTCTGCCACAGATCCTTCACAGACGAGAGACTGTTGTCTTTGGATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS-3UTR CCA 90 bp TCCAAAGACAACAGTCTCTCGTCTGTGAAGGATCTGTGGCAGAAAGAAAGGAAATTCACCCGAGCTTTCTaGCCTCCACTCAGCGTGGCT +
Preference number: 4 (lower is better)
Translates to: SKDNSLSSVKDLWQKERKFTRAF*PPLSVA
Trigger: AGCCACGCTGAGTGGAGGCCAGAAAGCTCGGGTGAA...TTTCCTTTCTTTCTGCCACAGATCCTTCACAGACGAGAGACTGTTGTCTTTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS-3UTR CCA 90 bp CTTGAGACTGTTAAGGCACAAAACCTGGTAGACGCTGCTGTTGGTGGCCTGCACCTGTTGTGCAAAGTCTaGGAAGCGTTCACAAGGATA +
Preference number: 4 (lower is better)
Translates to: LETVKAQNLVDAAVGGLHLLCKV*EAFTRI
Trigger: TATCCTTGTGAACGCTTCCCAGACTTTGCACAACAG...GTGCAGGCCACCAACAGCAGCGTCTACCAGGTTTTGTGCCTTAACAGTCTCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS-3UTR TCA 90 bp TCCAAAGACAACAGTCTCTCGTCTGTGAAGGATCTGTGGCAGAAAGAAAGGAAAGGATCCTGGCATCCGTaGAAGCCGCAGTTTTACTCC +
Preference number: 4 (lower is better)
Translates to: SKDNSLSSVKDLWQKERKGSWHP*KPQFYS
Trigger: GGAGTAAAACTGCGGCTTTCACGGATGCCAGGATCC...TTTCCTTTCTTTCTGCCACAGATCCTTCACAGACGAGAGACTGTTGTCTTTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS-3UTR TCA 90 bp AGCTCAAAGACAGCAGGGAGACGAACTGGCAACTGCACACAGTCTTCAAGTAAATGTGGCTTGCAGCTTTaGGGTACTGTAACTGGTGAG +
Preference number: 4 (lower is better)
Translates to: SSKTAGRRTGNCTQSSSKCGLQL*GTVTGE
Trigger: CTCACCAGTTACAGTACCTCAAAGCTGCAAGCCACA...TTTACTTGAAGACTGTGTGCAGTTGCCAGTTCGTCTCCCTGCTGTCTTTGAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS-3UTR TCA 90 bp AAAATCCAAAGACAACAGTCTCTCGTCTGTGAAGGATCTGTGGCAGAAAGAAAGGGAGCAACGTCTGGATaGAGTCCAGGAACGTCAGGG +
Preference number: 4 (lower is better)
Translates to: KIQRQQSLVCEGSVAERKGATSG*SPGTSG
Trigger: CCCTGACGTTCCTGGACTTCATCCAGACGTTGCTCC...CTTTCTTTCTGCCACAGATCCTTCACAGACGAGAGACTGTTGTCTTTGGATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS-3UTR TCA 90 bp CCATTAGTGGTCAGAGCTAAACTAATCTGGATGGGCTTTAGAAAGCGTGGCTTGCAAGAACCAAGCCTCTaGATGCAAGTCCTGGTGTGC +
Preference number: 4 (lower is better)
Translates to: PLVVRAKLIWMGFRKRGLQEPSL*MQVLVC
Trigger: GCACACCAGGACTTGCATTCAGAGGCTTGGTTCTTG...CAAGCCACGCTTTCTAAAGCCCATCCAGATTAGTTTAGCTCTGACCACTAATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS-3UTR GCA 90 bp CTTGAGACTGTTAAGGCACAAAACCTGGTAGACGCTGCTGTTGGTGGCCTGCACATAAAGGAAAGACCTTaGAGGGTTGGACTGTCTAGT +
Preference number: 4 (lower is better)
Translates to: LETVKAQNLVDAAVGGLHIKERP*RVGLSS
Trigger: ACTAGACAGTCCAACCCTGCAAGGTCTTTCCTTTAT...GTGCAGGCCACCAACAGCAGCGTCTACCAGGTTTTGTGCCTTAACAGTCTCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS-3UTR GCA 90 bp TCCAAAGACAACAGTCTCTCGTCTGTGAAGGATCTGTGGCAGAAAGAAAGGAAAATGAGCGCAGTCAGGTaGTTCAGAACCAGAGGCCCA +
Preference number: 4 (lower is better)
Translates to: SKDNSLSSVKDLWQKERKMSAVR*FRTRGP
Trigger: TGGGCCTCTGGTTCTGAAGCACCTGACTGCGCTCAT...TTTCCTTTCTTTCTGCCACAGATCCTTCACAGACGAGAGACTGTTGTCTTTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS-3UTR CCA 90 bp AGCTCAAAGACAGCAGGGAGACGAACTGGCAACTGCACACAGTCTTCAAGTAAATGGTTGTCTTCCCCATaGCCGAGTTACTTAACCGGA +
Preference number: 4 (lower is better)
Translates to: SSKTAGRRTGNCTQSSSKWLSSP*PSYLTG
Trigger: TCCGGTTAAGTAACTCGGCCATGGGGAAGACAACCA...TTTACTTGAAGACTGTGTGCAGTTGCCAGTTCGTCTCCCTGCTGTCTTTGAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS-3UTR CCA 90 bp CCATTAGTGGTCAGAGCTAAACTAATCTGGATGGGCTTTAGAAAGCGTGGCTTGTGTCGCACAGACCACTaGAACATCCCCATGAGTGTG +
Preference number: 4 (lower is better)
Translates to: PLVVRAKLIWMGFRKRGLCRTDH*NIPMSV
Trigger: CACACTCATGGGGATGTTCCAGTGGTCTGTGCGACA...CAAGCCACGCTTTCTAAAGCCCATCCAGATTAGTTTAGCTCTGACCACTAATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS-3UTR CCA 90 bp CTTGAGACTGTTAAGGCACAAAACCTGGTAGACGCTGCTGTTGGTGGCCTGCACGGTTATTCTTTAGAATaGCCCTTGCAAGGCACACTA +
Preference number: 4 (lower is better)
Translates to: LETVKAQNLVDAAVGGLHGYSLE*PLQGTL
Trigger: TAGTGTGCCTTGCAAGGGCCATTCTAAAGAATAACC...GTGCAGGCCACCAACAGCAGCGTCTACCAGGTTTTGTGCCTTAACAGTCTCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS-3UTR CCA 90 bp TCCAAAGACAACAGTCTCTCGTCTGTGAAGGATCTGTGGCAGAAAGAAAGGAAAGTGAGCACTGTGCACTaGGCAAACTTCTCCCGGATC +
Preference number: 4 (lower is better)
Translates to: SKDNSLSSVKDLWQKERKVSTVH*ANFSRI
Trigger: GATCCGGGAGAAGTTTGCCCAGTGCACAGTGCTCAC...TTTCCTTTCTTTCTGCCACAGATCCTTCACAGACGAGAGACTGTTGTCTTTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS-3UTR TCA 90 bp CCATTAGTGGTCAGAGCTAAACTAATCTGGATGGGCTTTAGAAAGCGTGGCTTGAGTTTTACTCCGCAGTaGCGAGAACAGCTTCCCGAT +
Preference number: 4 (lower is better)
Translates to: PLVVRAKLIWMGFRKRGLSFTPQ*REQLPD
Trigger: ATCGGGAAGCTGTTCTCGTCACTGCGGAGTAAAACT...CAAGCCACGCTTTCTAAAGCCCATCCAGATTAGTTTAGCTCTGACCACTAATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS-3UTR TCA 90 bp AGCTCAAAGACAGCAGGGAGACGAACTGGCAACTGCACACAGTCTTCAAGTAAAGAGTCACTAAAATGGTaGTCTTCTCGTGCAACGCCT +
Preference number: 4 (lower is better)
Translates to: SSKTAGRRTGNCTQSSSKESLKW*SSRATP
Trigger: AGGCGTTGCACGAGAAGATCACCATTTTAGTGACTC...TTTACTTGAAGACTGTGTGCAGTTGCCAGTTCGTCTCCCTGCTGTCTTTGAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS-3UTR TCA 90 bp AAAATCCAAAGACAACAGTCTCTCGTCTGTGAAGGATCTGTGGCAGAAAGAAAGGGTCTGGATGACTGCTaGGACCAAATTGAGGCCTCG +
Preference number: 4 (lower is better)
Translates to: KIQRQQSLVCEGSVAERKGLDDC*DQIEAS
Trigger: CGAGGCCTCAATTTGGTCTCAGCAGTCATCCAGACC...CTTTCTTTCTGCCACAGATCCTTCACAGACGAGAGACTGTTGTCTTTGGATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS-3UTR TCA 90 bp CCATTAGTGGTCAGAGCTAAACTAATCTGGATGGGCTTTAGAAAGCGTGGCTTGTTCCTAAGTACCAGCTaGGGTCTAGGGTCTCCGTTA +
Preference number: 4 (lower is better)
Translates to: PLVVRAKLIWMGFRKRGLFLSTS*GLGSPL
Trigger: TAACGGAGACCCTAGACCTCAGCTGGTACTTAGGAA...CAAGCCACGCTTTCTAAAGCCCATCCAGATTAGTTTAGCTCTGACCACTAATGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS-3UTR TCA 90 bp TCCAAAGACAACAGTCTCTCGTCTGTGAAGGATCTGTGGCAGAAAGAAAGGAAAGCATCAAACAGCTCCTaGCACCTCTCCTCAGCTTTG +
Preference number: 4 (lower is better)
Translates to: SKDNSLSSVKDLWQKERKASNSS*HLSSAL
Trigger: CAAAGCTGAGGAGAGGTGTCAGGAGCTGTTTGATGC...TTTCCTTTCTTTCTGCCACAGATCCTTCACAGACGAGAGACTGTTGTCTTTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS-3UTR GCA 90 bp AGCTCAAAGACAGCAGGGAGACGAACTGGCAACTGCACACAGTCTTCAAGTAAACCTGCCCACAGAAAGTaGAAGAAGATTGTCACTTGG +
Preference number: 4 (lower is better)
Translates to: SSKTAGRRTGNCTQSSSKPAHRK*KKIVTW
Trigger: CCAAGTGACAATCTTCTTGCACTTTCTGTGGGCAGG...TTTACTTGAAGACTGTGTGCAGTTGCCAGTTCGTCTCCCTGCTGTCTTTGAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS-3UTR GCA 90 bp CCATTAGTGGTCAGAGCTAAACTAATCTGGATGGGCTTTAGAAAGCGTGGCTTGTCTGGTGTTGTTCAGTaGACCTTGCTTGTTCGCCCA +
Preference number: 4 (lower is better)
Translates to: PLVVRAKLIWMGFRKRGLSGVVQ*TLLVRP
Trigger: TGGGCGAACAAGCAAGGTGCACTGAACAACACCAGA...CAAGCCACGCTTTCTAAAGCCCATCCAGATTAGTTTAGCTCTGACCACTAATGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS-3UTR GCA 90 bp AGCTCAAAGACAGCAGGGAGACGAACTGGCAACTGCACACAGTCTTCAAGTAAAATGCAAGTCCTGGTGTaGATCAAACAGCTCCTGACA +
Preference number: 4 (lower is better)
Translates to: SSKTAGRRTGNCTQSSSKMQVLV*IKQLLT
Trigger: TGTCAGGAGCTGTTTGATGCACACCAGGACTTGCAT...TTTACTTGAAGACTGTGTGCAGTTGCCAGTTCGTCTCCCTGCTGTCTTTGAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS-3UTR GCA 90 bp AGCTCAAAGACAGCAGGGAGACGAACTGGCAACTGCACACAGTCTTCAAGTAAAAACCAAGCCTCTGAATaGAAGTCCTGGTGTGCATCA +
Preference number: 4 (lower is better)
Translates to: SSKTAGRRTGNCTQSSSKNQASE*KSWCAS
Trigger: TGATGCACACCAGGACTTGCATTCAGAGGCTTGGTT...TTTACTTGAAGACTGTGTGCAGTTGCCAGTTCGTCTCCCTGCTGTCTTTGAGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS-3UTR GCA 90 bp TCCAAAGACAACAGTCTCTCGTCTGTGAAGGATCTGTGGCAGAAAGAAAGGAAAAAGGCCAGGCCAACCTaGCCAGCATTCAAAGTCTTC +
Preference number: 4 (lower is better)
Translates to: SKDNSLSSVKDLWQKERKKARPT*PAFKVF
Trigger: GAAGACTTTGAATGCTGGGCAGGTTGGCCTGGCCTT...TTTCCTTTCTTTCTGCCACAGATCCTTCACAGACGAGAGACTGTTGTCTTTGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS-3UTR GCA 90 bp AAAATCCAAAGACAACAGTCTCTCGTCTGTGAAGGATCTGTGGCAGAAAGAAAGATGAGCGCAGTCAGGTaGTTCAGAACCAGAGGCCCA +
Preference number: 4 (lower is better)
Translates to: KIQRQQSLVCEGSVAERKMSAVR*FRTRGP
Trigger: TGGGCCTCTGGTTCTGAAGCACCTGACTGCGCTCAT...CTTTCTTTCTGCCACAGATCCTTCACAGACGAGAGACTGTTGTCTTTGGATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS-3UTR GCA 90 bp CCATTAGTGGTCAGAGCTAAACTAATCTGGATGGGCTTTAGAAAGCGTGGCTTGTCCCAGCTCCGGTTCTaGCCACAATTCCAACCTTTT +
Preference number: 4 (lower is better)
Translates to: PLVVRAKLIWMGFRKRGLSQLRF*PQFQPF
Trigger: AAAAGGTTGGAATTGTGGGCAGAACCGGAGCTGGGA...CAAGCCACGCTTTCTAAAGCCCATCCAGATTAGTTTAGCTCTGACCACTAATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS-3UTR GCA 90 bp CTTGAGACTGTTAAGGCACAAAACCTGGTAGACGCTGCTGTTGGTGGCCTGCACTCTTGGGTCCACATTTaGAGTTGCTTCATCAATGAT +
Preference number: 4 (lower is better)
Translates to: LETVKAQNLVDAAVGGLHSWVHI*SCFIND
Trigger: ATCATTGATGAAGCAACTGCAAATGTGGACCCAAGA...GTGCAGGCCACCAACAGCAGCGTCTACCAGGTTTTGTGCCTTAACAGTCTCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS-3UTR GCA 90 bp AGCTCAAAGACAGCAGGGAGACGAACTGGCAACTGCACACAGTCTTCAAGTAAAGAAGTATACCTGTTTTaGTGTTTCGGTGAGGGCAGC +
Preference number: 4 (lower is better)
Translates to: SSKTAGRRTGNCTQSSSKEVYLF*CFGEGS
Trigger: GCTGCCCTCACCGAAACAGCAAAACAGGTATACTTC...TTTACTTGAAGACTGTGTGCAGTTGCCAGTTCGTCTCCCTGCTGTCTTTGAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS-3UTR CCA 90 bp CCATTAGTGGTCAGAGCTAAACTAATCTGGATGGGCTTTAGAAAGCGTGGCTTGAGCAGGTTAACTATCTaGCCTGTGGTTGTCTTCCCC +
Preference number: 4 (lower is better)
Translates to: PLVVRAKLIWMGFRKRGLSRLTI*PVVVFP
Trigger: GGGGAAGACAACCACAGGCCAGATAGTTAACCTGCT...CAAGCCACGCTTTCTAAAGCCCATCCAGATTAGTTTAGCTCTGACCACTAATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS-3UTR CCA 90 bp TCCAAAGACAACAGTCTCTCGTCTGTGAAGGATCTGTGGCAGAAAGAAAGGAAAATGGTCCAGAGTCCCTaGAGGGAGGACGATAAATGG +
Preference number: 4 (lower is better)
Translates to: SKDNSLSSVKDLWQKERKMVQSP*REDDKW
Trigger: CCATTTATCGTCCTCCCTCCAGGGACTCTGGACCAT...TTTCCTTTCTTTCTGCCACAGATCCTTCACAGACGAGAGACTGTTGTCTTTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS-3UTR TCA 90 bp TCCAAAGACAACAGTCTCTCGTCTGTGAAGGATCTGTGGCAGAAAGAAAGGAAATTCTCGTGCAACGCCTaGCAGATACACAGTTGGAAC +
Preference number: 4 (lower is better)
Translates to: SKDNSLSSVKDLWQKERKFSCNA*QIHSWN
Trigger: GTTCCAACTGTGTATCTGTCAGGCGTTGCACGAGAA...TTTCCTTTCTTTCTGCCACAGATCCTTCACAGACGAGAGACTGTTGTCTTTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS-3UTR TCA 90 bp CCATTAGTGGTCAGAGCTAAACTAATCTGGATGGGCTTTAGAAAGCGTGGCTTGGAGTCACTAAAATGGTaGTCTTCTCGTGCAACGCCT +
Preference number: 4 (lower is better)
Translates to: PLVVRAKLIWMGFRKRGLESLKW*SSRATP
Trigger: AGGCGTTGCACGAGAAGATCACCATTTTAGTGACTC...CAAGCCACGCTTTCTAAAGCCCATCCAGATTAGTTTAGCTCTGACCACTAATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS-3UTR TCA 90 bp TCCAAAGACAACAGTCTCTCGTCTGTGAAGGATCTGTGGCAGAAAGAAAGGAAATTCCTAAGTACCAGCTaGGGTCTAGGGTCTCCGTTA +
Preference number: 4 (lower is better)
Translates to: SKDNSLSSVKDLWQKERKFLSTS*GLGSPL
Trigger: TAACGGAGACCCTAGACCTCAGCTGGTACTTAGGAA...TTTCCTTTCTTTCTGCCACAGATCCTTCACAGACGAGAGACTGTTGTCTTTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS-3UTR TCA 90 bp AGCTCAAAGACAGCAGGGAGACGAACTGGCAACTGCACACAGTCTTCAAGTAAATCTTGTCACTGTCAATaGTGGTGTTCAGTCTGTGAG +
Preference number: 4 (lower is better)
Translates to: SSKTAGRRTGNCTQSSSKSCHCQ*WCSVCE
Trigger: CTCACAGACTGAACACCATCATTGACAGTGACAAGA...TTTACTTGAAGACTGTGTGCAGTTGCCAGTTCGTCTCCCTGCTGTCTTTGAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS-3UTR GCA 90 bp TCCAAAGACAACAGTCTCTCGTCTGTGAAGGATCTGTGGCAGAAAGAAAGGAAAAGAACAGCTTCCCGATaGAGCTTTGCAGAGGCAGAA +
Preference number: 4 (lower is better)
Translates to: SKDNSLSSVKDLWQKERKRTASR*SFAEAE
Trigger: TTCTGCCTCTGCAAAGCTGCATCGGGAAGCTGTTCT...TTTCCTTTCTTTCTGCCACAGATCCTTCACAGACGAGAGACTGTTGTCTTTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS-3UTR GCA 90 bp AGCTCAAAGACAGCAGGGAGACGAACTGGCAACTGCACACAGTCTTCAAGTAAATCCCAAATAAAATATTaGTCCTCACGGTGCCCGAGA +
Preference number: 4 (lower is better)
Translates to: SSKTAGRRTGNCTQSSSKSQIKY*SSRCPR
Trigger: TCTCGGGCACCGTGAGGAGCAATATTTTATTTGGGA...TTTACTTGAAGACTGTGTGCAGTTGCCAGTTCGTCTCCCTGCTGTCTTTGAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS-3UTR GCA 90 bp AAAATCCAAAGACAACAGTCTCTCGTCTGTGAAGGATCTGTGGCAGAAAGAAAGCACAGTTGGAACAGGTaGTTGCCCACTTCTGCATCG +
Preference number: 4 (lower is better)
Translates to: KIQRQQSLVCEGSVAERKHSWNR*LPTSAS
Trigger: CGATGCAGAAGTGGGCAAGCACCTGTTCCAACTGTG...CTTTCTTTCTGCCACAGATCCTTCACAGACGAGAGACTGTTGTCTTTGGATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS-3UTR GCA 90 bp AGCTCAAAGACAGCAGGGAGACGAACTGGCAACTGCACACAGTCTTCAAGTAAATCAAACATCCTGTTGTaGAAAGTCTGGGAAGCGTTC +
Preference number: 4 (lower is better)
Translates to: SSKTAGRRTGNCTQSSSKSNILL*KVWEAF
Trigger: GAACGCTTCCCAGACTTTGCACAACAGGATGTTTGA...TTTACTTGAAGACTGTGTGCAGTTGCCAGTTCGTCTCCCTGCTGTCTTTGAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS-3UTR GCA 90 bp CCATTAGTGGTCAGAGCTAAACTAATCTGGATGGGCTTTAGAAAGCGTGGCTTGATGCAAGTCCTGGTGTaGATCAAACAGCTCCTGACA +
Preference number: 4 (lower is better)
Translates to: PLVVRAKLIWMGFRKRGLMQVLV*IKQLLT
Trigger: TGTCAGGAGCTGTTTGATGCACACCAGGACTTGCAT...CAAGCCACGCTTTCTAAAGCCCATCCAGATTAGTTTAGCTCTGACCACTAATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS-3UTR GCA 90 bp CCATTAGTGGTCAGAGCTAAACTAATCTGGATGGGCTTTAGAAAGCGTGGCTTGAACCAAGCCTCTGAATaGAAGTCCTGGTGTGCATCA +
Preference number: 4 (lower is better)
Translates to: PLVVRAKLIWMGFRKRGLNQASE*KSWCAS
Trigger: TGATGCACACCAGGACTTGCATTCAGAGGCTTGGTT...CAAGCCACGCTTTCTAAAGCCCATCCAGATTAGTTTAGCTCTGACCACTAATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS-3UTR GCA 90 bp AAAATCCAAAGACAACAGTCTCTCGTCTGTGAAGGATCTGTGGCAGAAAGAAAGAAGGCCAGGCCAACCTaGCCAGCATTCAAAGTCTTC +
Preference number: 4 (lower is better)
Translates to: KIQRQQSLVCEGSVAERKKARPT*PAFKVF
Trigger: GAAGACTTTGAATGCTGGGCAGGTTGGCCTGGCCTT...CTTTCTTTCTGCCACAGATCCTTCACAGACGAGAGACTGTTGTCTTTGGATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS-3UTR GCA 90 bp TCCAAAGACAACAGTCTCTCGTCTGTGAAGGATCTGTGGCAGAAAGAAAGGAAAAGGCTCTCTGGATTCTaGAGCAAGACATACGGCTCA +
Preference number: 4 (lower is better)
Translates to: SKDNSLSSVKDLWQKERKRLSGF*SKTYGS
Trigger: TGAGCCGTATGTCTTGCTGCAGAATCCAGAGAGCCT...TTTCCTTTCTTTCTGCCACAGATCCTTCACAGACGAGAGACTGTTGTCTTTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS-3UTR CCA 90 bp AAAATCCAAAGACAACAGTCTCTCGTCTGTGAAGGATCTGTGGCAGAAAGAAAGAAATCATGTGGCACATaGCAACCCGCAGCCTCATCC +
Preference number: 4 (lower is better)
Translates to: KIQRQQSLVCEGSVAERKKSCGT*QPAASS
Trigger: GGATGAGGCTGCGGGTTGCCATGTGCCACATGATTT...CTTTCTTTCTGCCACAGATCCTTCACAGACGAGAGACTGTTGTCTTTGGATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036554.14
CDS-3UTR CCA 90 bp CCATTAGTGGTCAGAGCTAAACTAATCTGGATGGGCTTTAGAAAGCGTGGCTTGCTTGCACGTGGACAATaGCTTTGCCATCAGATGGTA +
Preference number: 4 (lower is better)
Translates to: PLVVRAKLIWMGFRKRGLLARGQ*LCHQMV
Trigger: TACCATCTGATGGCAAAGCCATTGTCCACGTGCAAG...CAAGCCACGCTTTCTAAAGCCCATCCAGATTAGTTTAGCTCTGACCACTAATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS-3UTR CCA 90 bp AAAATCCAAAGACAACAGTCTCTCGTCTGTGAAGGATCTGTGGCAGAAAGAAAGTGTCGCACAGACCACTaGAACATCCCCATGAGTGTG +
Preference number: 4 (lower is better)
Translates to: KIQRQQSLVCEGSVAERKCRTDH*NIPMSV
Trigger: CACACTCATGGGGATGTTCCAGTGGTCTGTGCGACA...CTTTCTTTCTGCCACAGATCCTTCACAGACGAGAGACTGTTGTCTTTGGATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS-3UTR TCA 90 bp AGCTCAAAGACAGCAGGGAGACGAACTGGCAACTGCACACAGTCTTCAAGTAAAATCTTCTGGAAGCACTaGGAACATGTCATCTTCTTC +
Preference number: 4 (lower is better)
Translates to: SSKTAGRRTGNCTQSSSKIFWKH*EHVIFF
Trigger: GAAGAAGATGACATGTTCTCAGTGCTTCCAGAAGAT...TTTACTTGAAGACTGTGTGCAGTTGCCAGTTCGTCTCCCTGCTGTCTTTGAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS-3UTR TCA 90 bp CCATTAGTGGTCAGAGCTAAACTAATCTGGATGGGCTTTAGAAAGCGTGGCTTGTTCTTCCTTAAGTCGTaGAGCCCAATTTCGGTTGTC +
Preference number: 4 (lower is better)
Translates to: PLVVRAKLIWMGFRKRGLFFLKS*SPISVV
Trigger: GACAACCGAAATTGGGCTTCACGACTTAAGGAAGAA...CAAGCCACGCTTTCTAAAGCCCATCCAGATTAGTTTAGCTCTGACCACTAATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS-3UTR TCA 90 bp CCATTAGTGGTCAGAGCTAAACTAATCTGGATGGGCTTTAGAAAGCGTGGCTTGTCTTGTCACTGTCAATaGTGGTGTTCAGTCTGTGAG +
Preference number: 4 (lower is better)
Translates to: PLVVRAKLIWMGFRKRGLSCHCQ*WCSVCE
Trigger: CTCACAGACTGAACACCATCATTGACAGTGACAAGA...CAAGCCACGCTTTCTAAAGCCCATCCAGATTAGTTTAGCTCTGACCACTAATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS-3UTR GCA 90 bp AAAATCCAAAGACAACAGTCTCTCGTCTGTGAAGGATCTGTGGCAGAAAGAAAGGGCTGTGGAGGGCTCTaGTTCCTCGTTTTCTTTCTT +
Preference number: 4 (lower is better)
Translates to: KIQRQQSLVCEGSVAERKGCGGL*FLVFFL
Trigger: AAGAAAGAAAACGAGGAAGCAGAGCCCTCCACAGCC...CTTTCTTTCTGCCACAGATCCTTCACAGACGAGAGACTGTTGTCTTTGGATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS-3UTR GCA 90 bp AAAATCCAAAGACAACAGTCTCTCGTCTGTGAAGGATCTGTGGCAGAAAGAAAGTCCCAGCTCCGGTTCTaGCCACAATTCCAACCTTTT +
Preference number: 4 (lower is better)
Translates to: KIQRQQSLVCEGSVAERKSQLRF*PQFQPF
Trigger: AAAAGGTTGGAATTGTGGGCAGAACCGGAGCTGGGA...CTTTCTTTCTGCCACAGATCCTTCACAGACGAGAGACTGTTGTCTTTGGATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS-3UTR CCA 90 bp AGCTCAAAGACAGCAGGGAGACGAACTGGCAACTGCACACAGTCTTCAAGTAAAAGCTGCCCAGAATCTTaGAAATCTCCTTCTTTCTCA +
Preference number: 4 (lower is better)
Translates to: SSKTAGRRTGNCTQSSSKSCPES*KSPSFS
Trigger: TGAGAAAGAAGGAGATTTCCAAGATTCTGGGCAGCT...TTTACTTGAAGACTGTGTGCAGTTGCCAGTTCGTCTCCCTGCTGTCTTTGAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS-3UTR CCA 90 bp CCATTAGTGGTCAGAGCTAAACTAATCTGGATGGGCTTTAGAAAGCGTGGCTTGATGGCCACAAACACGTaGCTAGCTGTAATCTCATTG +
Preference number: 4 (lower is better)
Translates to: PLVVRAKLIWMGFRKRGLMATNT*LAVISL
Trigger: CAATGAGATTACAGCTAGCCACGTGTTTGTGGCCAT...CAAGCCACGCTTTCTAAAGCCCATCCAGATTAGTTTAGCTCTGACCACTAATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS-3UTR CCA 90 bp TCCAAAGACAACAGTCTCTCGTCTGTGAAGGATCTGTGGCAGAAAGAAAGGAAACTTGCACGTGGACAATaGCTTTGCCATCAGATGGTA +
Preference number: 4 (lower is better)
Translates to: SKDNSLSSVKDLWQKERKLARGQ*LCHQMV
Trigger: TACCATCTGATGGCAAAGCCATTGTCCACGTGCAAG...TTTCCTTTCTTTCTGCCACAGATCCTTCACAGACGAGAGACTGTTGTCTTTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS-3UTR CCA 90 bp TCCAAAGACAACAGTCTCTCGTCTGTGAAGGATCTGTGGCAGAAAGAAAGGAAACTTTCAACGAGGGTCTaGATGACTGCTGAGACCAAA +
Preference number: 4 (lower is better)
Translates to: SKDNSLSSVKDLWQKERKLSTRV*MTAETK
Trigger: TTTGGTCTCAGCAGTCATCCAGACCCTCGTTGAAAG...TTTCCTTTCTTTCTGCCACAGATCCTTCACAGACGAGAGACTGTTGTCTTTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS-3UTR CCA 90 bp TCCAAAGACAACAGTCTCTCGTCTGTGAAGGATCTGTGGCAGAAAGAAAGGAAACGGGAGCCTTCAGTATaGACTCAAACATCCTGTTGT +
Preference number: 4 (lower is better)
Translates to: SKDNSLSSVKDLWQKERKREPSV*TQTSCC
Trigger: ACAACAGGATGTTTGAGTCCATACTGAAGGCTCCCG...TTTCCTTTCTTTCTGCCACAGATCCTTCACAGACGAGAGACTGTTGTCTTTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS-3UTR CCA 90 bp TCCAAAGACAACAGTCTCTCGTCTGTGAAGGATCTGTGGCAGAAAGAAAGGAAATCTGAATGCAAGTCCTaGTGTGCATCAAACAGCTCC +
Preference number: 4 (lower is better)
Translates to: SKDNSLSSVKDLWQKERKSECKS*CASNSS
Trigger: GGAGCTGTTTGATGCACACCAGGACTTGCATTCAGA...TTTCCTTTCTTTCTGCCACAGATCCTTCACAGACGAGAGACTGTTGTCTTTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS-3UTR CCA 90 bp AGCTCAAAGACAGCAGGGAGACGAACTGGCAACTGCACACAGTCTTCAAGTAAAGGTTATTCTTTAGAATaGCCCTTGCAAGGCACACTA +
Preference number: 4 (lower is better)
Translates to: SSKTAGRRTGNCTQSSSKGYSLE*PLQGTL
Trigger: TAGTGTGCCTTGCAAGGGCCATTCTAAAGAATAACC...TTTACTTGAAGACTGTGTGCAGTTGCCAGTTCGTCTCCCTGCTGTCTTTGAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS-3UTR CCA 90 bp AGCTCAAAGACAGCAGGGAGACGAACTGGCAACTGCACACAGTCTTCAAGTAAAGTAAAAGAGGCTCTCTaGATTCTGCAGCAAGACATA +
Preference number: 4 (lower is better)
Translates to: SSKTAGRRTGNCTQSSSKVKEAL*ILQQDI
Trigger: TATGTCTTGCTGCAGAATCCAGAGAGCCTCTTTTAC...TTTACTTGAAGACTGTGTGCAGTTGCCAGTTCGTCTCCCTGCTGTCTTTGAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS-3UTR TCA 90 bp TCCAAAGACAACAGTCTCTCGTCTGTGAAGGATCTGTGGCAGAAAGAAAGGAAAGTCTCTGTCCAACACTaGAATTGGATCCAGATTCTG +
Preference number: 4 (lower is better)
Translates to: SKDNSLSSVKDLWQKERKVSVQH*NWIQIL
Trigger: CAGAATCTGGATCCAATTTCAGTGTTGGACAGAGAC...TTTCCTTTCTTTCTGCCACAGATCCTTCACAGACGAGAGACTGTTGTCTTTGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS-3UTR CCA 90 bp TCCAAAGACAACAGTCTCTCGTCTGTGAAGGATCTGTGGCAGAAAGAAAGGAAAATGGCCACAAACACGTaGCTAGCTGTAATCTCATTG +
Preference number: 4 (lower is better)
Translates to: SKDNSLSSVKDLWQKERKMATNT*LAVISL
Trigger: CAATGAGATTACAGCTAGCCACGTGTTTGTGGCCAT...TTTCCTTTCTTTCTGCCACAGATCCTTCACAGACGAGAGACTGTTGTCTTTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS-3UTR CCA 90 bp AAAATCCAAAGACAACAGTCTCTCGTCTGTGAAGGATCTGTGGCAGAAAGAAAGCTTTCAACGAGGGTCTaGATGACTGCTGAGACCAAA +
Preference number: 4 (lower is better)
Translates to: KIQRQQSLVCEGSVAERKLSTRV*MTAETK
Trigger: TTTGGTCTCAGCAGTCATCCAGACCCTCGTTGAAAG...CTTTCTTTCTGCCACAGATCCTTCACAGACGAGAGACTGTTGTCTTTGGATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS-3UTR CCA 90 bp AAAATCCAAAGACAACAGTCTCTCGTCTGTGAAGGATCTGTGGCAGAAAGAAAGTCTGAATGCAAGTCCTaGTGTGCATCAAACAGCTCC +
Preference number: 4 (lower is better)
Translates to: KIQRQQSLVCEGSVAERKSECKS*CASNSS
Trigger: GGAGCTGTTTGATGCACACCAGGACTTGCATTCAGA...CTTTCTTTCTGCCACAGATCCTTCACAGACGAGAGACTGTTGTCTTTGGATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS-3UTR CCA 90 bp CCATTAGTGGTCAGAGCTAAACTAATCTGGATGGGCTTTAGAAAGCGTGGCTTGGTAAAAGAGGCTCTCTaGATTCTGCAGCAAGACATA +
Preference number: 4 (lower is better)
Translates to: PLVVRAKLIWMGFRKRGLVKEAL*ILQQDI
Trigger: TATGTCTTGCTGCAGAATCCAGAGAGCCTCTTTTAC...CAAGCCACGCTTTCTAAAGCCCATCCAGATTAGTTTAGCTCTGACCACTAATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS-3UTR TCA 90 bp CCATTAGTGGTCAGAGCTAAACTAATCTGGATGGGCTTTAGAAAGCGTGGCTTGTCCAGTAACACTTTATaGTTGCCTTTGTTAAGGAGG +
Preference number: 4 (lower is better)
Translates to: PLVVRAKLIWMGFRKRGLSSNTL*LPLLRR
Trigger: CCTCCTTAACAAAGGCAATCATAAAGTGTTACTGGA...CAAGCCACGCTTTCTAAAGCCCATCCAGATTAGTTTAGCTCTGACCACTAATGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS-3UTR TCA 90 bp AAAATCCAAAGACAACAGTCTCTCGTCTGTGAAGGATCTGTGGCAGAAAGAAAGTTCTTCCTTAAGTCGTaGAGCCCAATTTCGGTTGTC +
Preference number: 4 (lower is better)
Translates to: KIQRQQSLVCEGSVAERKFFLKS*SPISVV
Trigger: GACAACCGAAATTGGGCTTCACGACTTAAGGAAGAA...CTTTCTTTCTGCCACAGATCCTTCACAGACGAGAGACTGTTGTCTTTGGATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS-3UTR GCA 90 bp TCCAAAGACAACAGTCTCTCGTCTGTGAAGGATCTGTGGCAGAAAGAAAGGAAAATAAAGGAAAGACCTTaGAGGGTTGGACTGTCTAGT +
Preference number: 4 (lower is better)
Translates to: SKDNSLSSVKDLWQKERKIKERP*RVGLSS
Trigger: ACTAGACAGTCCAACCCTGCAAGGTCTTTCCTTTAT...TTTCCTTTCTTTCTGCCACAGATCCTTCACAGACGAGAGACTGTTGTCTTTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS-3UTR GCA 90 bp AAAATCCAAAGACAACAGTCTCTCGTCTGTGAAGGATCTGTGGCAGAAAGAAAGTCCCAAATAAAATATTaGTCCTCACGGTGCCCGAGA +
Preference number: 4 (lower is better)
Translates to: KIQRQQSLVCEGSVAERKSQIKY*SSRCPR
Trigger: TCTCGGGCACCGTGAGGAGCAATATTTTATTTGGGA...CTTTCTTTCTGCCACAGATCCTTCACAGACGAGAGACTGTTGTCTTTGGATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS-3UTR GCA 90 bp AAAATCCAAAGACAACAGTCTCTCGTCTGTGAAGGATCTGTGGCAGAAAGAAAGTCAAACATCCTGTTGTaGAAAGTCTGGGAAGCGTTC +
Preference number: 4 (lower is better)
Translates to: KIQRQQSLVCEGSVAERKSNILL*KVWEAF
Trigger: GAACGCTTCCCAGACTTTGCACAACAGGATGTTTGA...CTTTCTTTCTGCCACAGATCCTTCACAGACGAGAGACTGTTGTCTTTGGATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS-3UTR GCA 90 bp CCATTAGTGGTCAGAGCTAAACTAATCTGGATGGGCTTTAGAAAGCGTGGCTTGTCTTGGGTCCACATTTaGAGTTGCTTCATCAATGAT +
Preference number: 4 (lower is better)
Translates to: PLVVRAKLIWMGFRKRGLSWVHI*SCFIND
Trigger: ATCATTGATGAAGCAACTGCAAATGTGGACCCAAGA...CAAGCCACGCTTTCTAAAGCCCATCCAGATTAGTTTAGCTCTGACCACTAATGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS-3UTR CCA 90 bp CCATTAGTGGTCAGAGCTAAACTAATCTGGATGGGCTTTAGAAAGCGTGGCTTGAAGAAGATTGTCACTTaGTCGAATTTGTTCACGTCG +
Preference number: 4 (lower is better)
Translates to: PLVVRAKLIWMGFRKRGLKKIVT*SNLFTS
Trigger: CGACGTGAACAAATTCGACCAAGTGACAATCTTCTT...CAAGCCACGCTTTCTAAAGCCCATCCAGATTAGTTTAGCTCTGACCACTAATGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS-3UTR TCA 90 bp TCCAAAGACAACAGTCTCTCGTCTGTGAAGGATCTGTGGCAGAAAGAAAGGAAATCCAGTAACACTTTATaGTTGCCTTTGTTAAGGAGG +
Preference number: 4 (lower is better)
Translates to: SKDNSLSSVKDLWQKERKSSNTL*LPLLRR
Trigger: CCTCCTTAACAAAGGCAATCATAAAGTGTTACTGGA...TTTCCTTTCTTTCTGCCACAGATCCTTCACAGACGAGAGACTGTTGTCTTTGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS-3UTR TCA 90 bp AAAATCCAAAGACAACAGTCTCTCGTCTGTGAAGGATCTGTGGCAGAAAGAAAGAGGTACTGTAACTGGTaGGTCACTAAAATGGTGATC +
Preference number: 4 (lower is better)
Translates to: KIQRQQSLVCEGSVAERKRYCNW*VTKMVI
Trigger: GATCACCATTTTAGTGACTCACCAGTTACAGTACCT...CTTTCTTTCTGCCACAGATCCTTCACAGACGAGAGACTGTTGTCTTTGGATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS-3UTR CCA 90 bp AAAATCCAAAGACAACAGTCTCTCGTCTGTGAAGGATCTGTGGCAGAAAGAAAGAGCTGCCCAGAATCTTaGAAATCTCCTTCTTTCTCA +
Preference number: 4 (lower is better)
Translates to: KIQRQQSLVCEGSVAERKSCPES*KSPSFS
Trigger: TGAGAAAGAAGGAGATTTCCAAGATTCTGGGCAGCT...CTTTCTTTCTGCCACAGATCCTTCACAGACGAGAGACTGTTGTCTTTGGATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS-3UTR CCA 90 bp CCATTAGTGGTCAGAGCTAAACTAATCTGGATGGGCTTTAGAAAGCGTGGCTTGTGTGTCCGATGTCTTTaGAGAAACGATTTAAAATCC +
Preference number: 4 (lower is better)
Translates to: PLVVRAKLIWMGFRKRGLCVRCL*RNDLKS
Trigger: GGATTTTAAATCGTTTCTCCAAAGACATCGGACACA...CAAGCCACGCTTTCTAAAGCCCATCCAGATTAGTTTAGCTCTGACCACTAATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS-3UTR CCA 90 bp AAAATCCAAAGACAACAGTCTCTCGTCTGTGAAGGATCTGTGGCAGAAAGAAAGAAGAAGATTGTCACTTaGTCGAATTTGTTCACGTCG +
Preference number: 4 (lower is better)
Translates to: KIQRQQSLVCEGSVAERKKKIVT*SNLFTS
Trigger: CGACGTGAACAAATTCGACCAAGTGACAATCTTCTT...CTTTCTTTCTGCCACAGATCCTTCACAGACGAGAGACTGTTGTCTTTGGATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS-3UTR GCA 90 bp AAAATCCAAAGACAACAGTCTCTCGTCTGTGAAGGATCTGTGGCAGAAAGAAAGGTCCACATTTGCAGTTaGTTCATCAATGATCAGTAT +
Preference number: 4 (lower is better)
Translates to: KIQRQQSLVCEGSVAERKVHICS*FINDQY
Trigger: ATACTGATCATTGATGAAGCAACTGCAAATGTGGAC...CTTTCTTTCTGCCACAGATCCTTCACAGACGAGAGACTGTTGTCTTTGGATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS-3UTR CCA 90 bp AAAATCCAAAGACAACAGTCTCTCGTCTGTGAAGGATCTGTGGCAGAAAGAAAGTGTGTCCGATGTCTTTaGAGAAACGATTTAAAATCC +
Preference number: 4 (lower is better)
Translates to: KIQRQQSLVCEGSVAERKCVRCL*RNDLKS
Trigger: GGATTTTAAATCGTTTCTCCAAAGACATCGGACACA...CTTTCTTTCTGCCACAGATCCTTCACAGACGAGAGACTGTTGTCTTTGGATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS GCA 90 bp GTGCACGCTGACCAGCCCGCTGGCAGGAGGCAGCTCACCCAGCACTaGGCTCAACAGCGACGACTTGCCTGCTCCAACTGGGCCAACCAC +
Preference number: 5 (lower is better)
Translates to: VHADQPAGRRQLTQH*AQQRRLACSNWANH
Trigger: GTGGTTGGCCCAGTTGGAGCAGGCAAGTCGTCGCTGTTGAGCGCAGTGCTGGGTGAGCTGCCTCCTGCCAGCGGGCTGGTCAGCGTGCAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS GCA 90 bp CGGATCATCAAGGAGGTAGATGTCGGCGTCCTGGTAGACGGCCCGTaGCAGGTTCACCCGAGCTTTCTGGCCTCCACTCAGCGTGGCTCC +
Preference number: 5 (lower is better)
Translates to: RIIKEVDVGVLVDGP*QVHPSFLASTQRGS
Trigger: GGAGCCACGCTGAGTGGAGGCCAGAAAGCTCGGGTGAACCTGGCACGGGCCGTCTACCAGGACGCCGACATCTACCTCCTTGATGATCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS CCA 90 bp GAACGGCTCTCCTCGGGTTGCACTGCCTGCGTGTTCTCTGCGTCTTaGCCCTCTGGGGCCCCGTCTTTCAACGAGGGTCTGGATGACTGC +
Preference number: 5 (lower is better)
Translates to: ERLSSGCTACVFSAS*PSGAPSFNEGLDDC
Trigger: GCAGTCATCCAGACCCTCGTTGAAAGACGGGGCCCCAGAGGGCCAAGACGCAGAGAACACGCAGGCAGTGCAACCCGAGGAGAGCCGTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS CCA 90 bp GGCAGGAGATTCCTATCTCCACCCAGAGGAGGACGGTTACCGCGATaGCCTGCAGCGGCCCTGCCCACAGAAAGTGCAAGAAGATTGTCA +
Preference number: 5 (lower is better)
Translates to: GRRFLSPPRGGRLPR*PAAALPTESARRLS
Trigger: TGACAATCTTCTTGCACTTTCTGTGGGCAGGGCCGCTGCAGGCCATCGCGGTAACCGTCCTCCTCTGGGTGGAGATAGGAATCTCCTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS GCA 90 bp GAGATTCCTATCTCCACCCAGAGGAGGACGGTTACCGCGATGGCCTaGAGCGGCCCTGCCCACAGAAAGTGCAAGAAGATTGTCACTTGG +
Preference number: 5 (lower is better)
Translates to: EIPISTQRRTVTAMA*SGPAHRKCKKIVTW
Trigger: CCAAGTGACAATCTTCTTGCACTTTCTGTGGGCAGGGCCGCTGCAGGCCATCGCGGTAACCGTCCTCCTCTGGGTGGAGATAGGAATCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS CCA 90 bp TCTCTGCGTCTTGGCCCTCTGGGGCCCCGTCTTTCAACGAGGGTCTaGATGACTGCTGAGACCAAATTGAGGCCTCGGAGAAGGTTCGTT +
Preference number: 5 (lower is better)
Translates to: SLRLGPLGPRLSTRV*MTAETKLRPRRRFV
Trigger: AACGAACCTTCTCCGAGGCCTCAATTTGGTCTCAGCAGTCATCCAGACCCTCGTTGAAAGACGGGGCCCCAGAGGGCCAAGACGCAGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS TCA 90 bp CCGCGGCCACAGCGATCACACTTACGACGAGGAGCAACGTCTGGATaGAGTCCAGGAACGTCAGGGGAAGCAAATCATCCATGTGTCCGA +
Preference number: 5 (lower is better)
Translates to: PRPQRSHLRRGATSG*SPGTSGEANHPCVR
Trigger: TCGGACACATGGATGATTTGCTTCCCCTGACGTTCCTGGACTTCATCCAGACGTTGCTCCTCGTCGTAAGTGTGATCGCTGTGGCCGCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS GCA 90 bp CTCCACCCAGAGGAGGACGGTTACCGCGATGGCCTGCAGCGGCCCTaGCCACAGAAAGTGCAAGAAGATTGTCACTTGGTCGAATTTGTT +
Preference number: 5 (lower is better)
Translates to: LHPEEDGYRDGLQRP*PQKVQEDCHLVEFV
Trigger: AACAAATTCGACCAAGTGACAATCTTCTTGCACTTTCTGTGGGCAGGGCCGCTGCAGGCCATCGCGGTAACCGTCCTCCTCTGGGTGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS CCA 90 bp ACGGCCGCGGCCACAGCGATCACACTTACGACGAGGAGCAACGTCTaGATGAAGTCCAGGAACGTCAGGGGAAGCAAATCATCCATGTGT +
Preference number: 5 (lower is better)
Translates to: TAAATAITLTTRSNV*MKSRNVRGSKSSMC
Trigger: ACACATGGATGATTTGCTTCCCCTGACGTTCCTGGACTTCATCCAGACGTTGCTCCTCGTCGTAAGTGTGATCGCTGTGGCCGCGGCCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS-3UTR CAA 90 bp CTTGAGACTGTTAAGGCACAAAACCTGGTAGACGCTGCTGTTGGTGGCCTGCACCTCAACAGCGACGACTaGCCTGCTCCAACTGGGCCA +
Preference number: 5 (lower is better)
Translates to: LETVKAQNLVDAAVGGLHLNSDD*PAPTGP
Trigger: TGGCCCAGTTGGAGCAGGCAAGTCGTCGCTGTTGAG...GTGCAGGCCACCAACAGCAGCGTCTACCAGGTTTTGTGCCTTAACAGTCTCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS-3UTR CAA 90 bp CTTGAGACTGTTAAGGCACAAAACCTGGTAGACGCTGCTGTTGGTGGCCTGCACGCCGAGGGCTGTCCATaGGAGGTGTTCATAACCGCG +
Preference number: 5 (lower is better)
Translates to: LETVKAQNLVDAAVGGLHAEGCP*EVFITA
Trigger: CGCGGTTATGAACACCTCCAATGGACAGCCCTCGGC...GTGCAGGCCACCAACAGCAGCGTCTACCAGGTTTTGTGCCTTAACAGTCTCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS TCA 90 bp GGTCCGGATCCTGGCATCCGTGAAAGCCGCAGTTTTACTCCGCAGTaGCGAGAACAGCTTCCCGATGCAGCTTTGCAGAGGCAGAAGAAT +
Preference number: 5 (lower is better)
Translates to: GPDPGIRESRSFTPQ*REQLPDAALQRQKN
Trigger: ATTCTTCTGCCTCTGCAAAGCTGCATCGGGAAGCTGTTCTCGTCACTGCGGAGTAAAACTGCGGCTTTCACGGATGCCAGGATCCGGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS GCA 90 bp AGGACGGTTACCGCGATGGCCTGCAGCGGCCCTGCCCACAGAAAGTaGAAGAAGATTGTCACTTGGTCGAATTTGTTCACGTCGTTGGAC +
Preference number: 5 (lower is better)
Translates to: RTVTAMACSGPAHRK*KKIVTWSNLFTSLD
Trigger: GTCCAACGACGTGAACAAATTCGACCAAGTGACAATCTTCTTGCACTTTCTGTGGGCAGGGCCGCTGCAGGCCATCGCGGTAACCGTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS-3UTR CAA 90 bp CTTGAGACTGTTAAGGCACAAAACCTGGTAGACGCTGCTGTTGGTGGCCTGCACGTGGATTCCAGGCGCTaGACATCCCGTGACGTCTCT +
Preference number: 5 (lower is better)
Translates to: LETVKAQNLVDAAVGGLHVDSRR*TSRDVS
Trigger: AGAGACGTCACGGGATGTCAAGCGCCTGGAATCCAC...GTGCAGGCCACCAACAGCAGCGTCTACCAGGTTTTGTGCCTTAACAGTCTCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS GCA 90 bp GCTCCCCGGTCTCCTATAACCGTCAGATCCCCGTCCTCCAGAAGCTaGAGGTCCTTCTTCAGAGCACAGGCCTTGATCACTTTCTCATAT +
Preference number: 5 (lower is better)
Translates to: APRSPITVRSPSSRS*RSFFRAQALITFSY
Trigger: ATATGAGAAAGTGATCAAGGCCTGTGCTCTGAAGAAGGACCTGCAGCTTCTGGAGGACGGGGATCTGACGGTTATAGGAGACCGGGGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS CCA 90 bp CATCAAACAGCTCCTGACACCTCTCCTCAGCTTTGTAAGCCCGGATaGTCCAGAGTCCCTGGAGGGAGGACGATAAATGGGAGAATACCG +
Preference number: 5 (lower is better)
Translates to: HQTAPDTSPQLCKPG*SRVPGGRTINGRIP
Trigger: CGGTATTCTCCCATTTATCGTCCTCCCTCCAGGGACTCTGGACCATCCGGGCTTACAAAGCTGAGGAGAGGTGTCAGGAGCTGTTTGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS-3UTR CAA 90 bp CCATTAGTGGTCAGAGCTAAACTAATCTGGATGGGCTTTAGAAAGCGTGGCTTGGCGTCCTGCAGCGGGTaGGGTTTCACCTCGGTGTGC +
Preference number: 5 (lower is better)
Translates to: PLVVRAKLIWMGFRKRGLASCSG*GFTSVC
Trigger: GCACACCGAGGTGAAACCCAACCCGCTGCAGGACGC...CAAGCCACGCTTTCTAAAGCCCATCCAGATTAGTTTAGCTCTGACCACTAATGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS-3UTR CAA 90 bp CTTGAGACTGTTAAGGCACAAAACCTGGTAGACGCTGCTGTTGGTGGCCTGCACTCGTCCGTGTGCTCATaGAAGGGGTCCAGGTTTTTC +
Preference number: 5 (lower is better)
Translates to: LETVKAQNLVDAAVGGLHSSVCS*KGSRFF
Trigger: GAAAAACCTGGACCCCTTCAATGAGCACACGGACGA...GTGCAGGCCACCAACAGCAGCGTCTACCAGGTTTTGTGCCTTAACAGTCTCAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS-3UTR CAA 90 bp AGCTCAAAGACAGCAGGGAGACGAACTGGCAACTGCACACAGTCTTCAAGTAAAGCCGAGGGCTGTCCATaGGAGGTGTTCATAACCGCG +
Preference number: 5 (lower is better)
Translates to: SSKTAGRRTGNCTQSSSKAEGCP*EVFITA
Trigger: CGCGGTTATGAACACCTCCAATGGACAGCCCTCGGC...TTTACTTGAAGACTGTGTGCAGTTGCCAGTTCGTCTCCCTGCTGTCTTTGAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS-3UTR CAA 90 bp AAAATCCAAAGACAACAGTCTCTCGTCTGTGAAGGATCTGTGGCAGAAAGAAAGGCGTCCTGCAGCGGGTaGGGTTTCACCTCGGTGTGC +
Preference number: 5 (lower is better)
Translates to: KIQRQQSLVCEGSVAERKASCSG*GFTSVC
Trigger: GCACACCGAGGTGAAACCCAACCCGCTGCAGGACGC...CTTTCTTTCTGCCACAGATCCTTCACAGACGAGAGACTGTTGTCTTTGGATTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS-3UTR CAA 90 bp AGCTCAAAGACAGCAGGGAGACGAACTGGCAACTGCACACAGTCTTCAAGTAAACTATCTGGCCTGTGGTaGTCTTCCCCATGGCCGAGT +
Preference number: 5 (lower is better)
Translates to: SSKTAGRRTGNCTQSSSKLSGLW*SSPWPS
Trigger: ACTCGGCCATGGGGAAGACAACCACAGGCCAGATAG...TTTACTTGAAGACTGTGTGCAGTTGCCAGTTCGTCTCCCTGCTGTCTTTGAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS-3UTR CAA 90 bp CTTGAGACTGTTAAGGCACAAAACCTGGTAGACGCTGCTGTTGGTGGCCTGCACACGTGGACAATGGCTTaGCCATCAGATGGTACATGG +
Preference number: 5 (lower is better)
Translates to: LETVKAQNLVDAAVGGLHTWTMA*PSDGTW
Trigger: CCATGTACCATCTGATGGCAAAGCCATTGTCCACGT...GTGCAGGCCACCAACAGCAGCGTCTACCAGGTTTTGTGCCTTAACAGTCTCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS-3UTR CAA 90 bp CTTGAGACTGTTAAGGCACAAAACCTGGTAGACGCTGCTGTTGGTGGCCTGCACAAAGACCTTGCAGGGTaGGACTGTCTAGTGCCTTGT +
Preference number: 5 (lower is better)
Translates to: LETVKAQNLVDAAVGGLHKDLAG*DCLVPC
Trigger: ACAAGGCACTAGACAGTCCAACCCTGCAAGGTCTTT...GTGCAGGCCACCAACAGCAGCGTCTACCAGGTTTTGTGCCTTAACAGTCTCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS-3UTR CAA 90 bp CCATTAGTGGTCAGAGCTAAACTAATCTGGATGGGCTTTAGAAAGCGTGGCTTGCTCAACAGCGACGACTaGCCTGCTCCAACTGGGCCA +
Preference number: 5 (lower is better)
Translates to: PLVVRAKLIWMGFRKRGLLNSDD*PAPTGP
Trigger: TGGCCCAGTTGGAGCAGGCAAGTCGTCGCTGTTGAG...CAAGCCACGCTTTCTAAAGCCCATCCAGATTAGTTTAGCTCTGACCACTAATGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS-3UTR CAA 90 bp TCCAAAGACAACAGTCTCTCGTCTGTGAAGGATCTGTGGCAGAAAGAAAGGAAAACGGCTCTCCTCGGGTaGCACTGCCTGCGTGTTCTC +
Preference number: 5 (lower is better)
Translates to: SKDNSLSSVKDLWQKERKTALLG*HCLRVL
Trigger: GAGAACACGCAGGCAGTGCAACCCGAGGAGAGCCGT...TTTCCTTTCTTTCTGCCACAGATCCTTCACAGACGAGAGACTGTTGTCTTTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS-3UTR CAA 90 bp CTTGAGACTGTTAAGGCACAAAACCTGGTAGACGCTGCTGTTGGTGGCCTGCACGACTCAAACATCCTGTaGTGCAAAGTCTGGGAAGCG +
Preference number: 5 (lower is better)
Translates to: LETVKAQNLVDAAVGGLHDSNIL*CKVWEA
Trigger: CGCTTCCCAGACTTTGCACAACAGGATGTTTGAGTC...GTGCAGGCCACCAACAGCAGCGTCTACCAGGTTTTGTGCCTTAACAGTCTCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS TCA 90 bp ATAAATGGGAGAATACCGGGCTCCGTGTTGTGGATTCCAGGCGCTTaGCATCCCGTGACGTCTCTAAGAAGTATCTCCGAAGAACCAGGA +
Preference number: 5 (lower is better)
Translates to: INGRIPGSVLWIPGA*HPVTSLRSISEEPG
Trigger: TCCTGGTTCTTCGGAGATACTTCTTAGAGACGTCACGGGATGTCAAGCGCCTGGAATCCACAACACGGAGCCCGGTATTCTCCCATTTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS GCA 90 bp GCTCCTTCTCATATTTCTTCCCAAATAAAATATTGCTCCTCACGGTaGCCGAGAACACCCAGGGCTGCTGAGAAACGTAGGCGATCCTCC +
Preference number: 5 (lower is better)
Translates to: APSHISSQIKYCSSR*PRTPRAAEKRRRSS
Trigger: GGAGGATCGCCTACGTTTCTCAGCAGCCCTGGGTGTTCTCGGGCACCGTGAGGAGCAATATTTTATTTGGGAAGAAATATGAGAAGGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS GCA 90 bp GGTGAATGTAATATCTGGGTAATTCCGTCTGAAGTATACCTGTTTTaGTGTTTCGGTGAGGGCAGCGGCTTCGCCCTTGCCCAGTTGCTG +
Preference number: 5 (lower is better)
Translates to: GECNIWVIPSEVYLF*CFGEGSGFALAQLL
Trigger: CAGCAACTGGGCAAGGGCGAAGCCGCTGCCCTCACCGAAACAGCAAAACAGGTATACTTCAGACGGAATTACCCAGATATTACATTCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS-3UTR CAA 90 bp CCATTAGTGGTCAGAGCTAAACTAATCTGGATGGGCTTTAGAAAGCGTGGCTTGCTATCTGGCCTGTGGTaGTCTTCCCCATGGCCGAGT +
Preference number: 5 (lower is better)
Translates to: PLVVRAKLIWMGFRKRGLLSGLW*SSPWPS
Trigger: ACTCGGCCATGGGGAAGACAACCACAGGCCAGATAG...CAAGCCACGCTTTCTAAAGCCCATCCAGATTAGTTTAGCTCTGACCACTAATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS-3UTR CAA 90 bp CTTGAGACTGTTAAGGCACAAAACCTGGTAGACGCTGCTGTTGGTGGCCTGCACTTCCCAAATAAAATATaGCTCCTCACGGTGCCCGAG +
Preference number: 5 (lower is better)
Translates to: LETVKAQNLVDAAVGGLHFPNKI*LLTVPE
Trigger: CTCGGGCACCGTGAGGAGCAATATTTTATTTGGGAA...GTGCAGGCCACCAACAGCAGCGTCTACCAGGTTTTGTGCCTTAACAGTCTCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS-3UTR CAA 90 bp CTTGAGACTGTTAAGGCACAAAACCTGGTAGACGCTGCTGTTGGTGGCCTGCACTTCAGAGCACAGGCCTaGATCACTTTCTCATATCGC +
Preference number: 5 (lower is better)
Translates to: LETVKAQNLVDAAVGGLHFRAQA*ITFSYR
Trigger: GCGATATGAGAAAGTGATCAAGGCCTGTGCTCTGAA...GTGCAGGCCACCAACAGCAGCGTCTACCAGGTTTTGTGCCTTAACAGTCTCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS-3UTR CAA 90 bp AAAATCCAAAGACAACAGTCTCTCGTCTGTGAAGGATCTGTGGCAGAAAGAAAGACGGCTCTCCTCGGGTaGCACTGCCTGCGTGTTCTC +
Preference number: 5 (lower is better)
Translates to: KIQRQQSLVCEGSVAERKTALLG*HCLRVL
Trigger: GAGAACACGCAGGCAGTGCAACCCGAGGAGAGCCGT...CTTTCTTTCTGCCACAGATCCTTCACAGACGAGAGACTGTTGTCTTTGGATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS-3UTR CAA 90 bp CCATTAGTGGTCAGAGCTAAACTAATCTGGATGGGCTTTAGAAAGCGTGGCTTGGTGGATTCCAGGCGCTaGACATCCCGTGACGTCTCT +
Preference number: 5 (lower is better)
Translates to: PLVVRAKLIWMGFRKRGLVDSRR*TSRDVS
Trigger: AGAGACGTCACGGGATGTCAAGCGCCTGGAATCCAC...CAAGCCACGCTTTCTAAAGCCCATCCAGATTAGTTTAGCTCTGACCACTAATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS GCA 90 bp GCCCACCATGTTAAGCAGCACAAGGAAAATGATGAAGAACCAGGATaGGCCCGCCGAGAAGTAATTCTTGTAGGCCTTGAAGCCGATTCT +
Preference number: 5 (lower is better)
Translates to: AHHVKQHKENDEEPG*ARREVILVGLEADS
Trigger: AGAATCGGCTTCAAGGCCTACAAGAATTACTTCTCGGCGGGCGCATCCTGGTTCTTCATCATTTTCCTTGTGCTGCTTAACATGGTGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS CCA 90 bp ACTTGGTCGAATTTGTTCACGTCGTTGGACAGCAGGTTAACTATCTaGCCTGTGGTTGTCTTCCCCATGGCCGAGTTACTTAACCGGAGT +
Preference number: 5 (lower is better)
Translates to: TWSNLFTSLDSRLTI*PVVVFPMAELLNRS
Trigger: ACTCCGGTTAAGTAACTCGGCCATGGGGAAGACAACCACAGGCCAGATAGTTAACCTGCTGTCCAACGACGTGAACAAATTCGACCAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS-3UTR CAA 90 bp AGCTCAAAGACAGCAGGGAGACGAACTGGCAACTGCACACAGTCTTCAAGTAAATTTATCCCAGTACCGTaGAAGCTCCTCTCCGAGGTG +
Preference number: 5 (lower is better)
Translates to: SSKTAGRRTGNCTQSSSKFIPVP*KLLSEV
Trigger: CACCTCGGAGAGGAGCTTCAACGGTACTGGGATAAA...TTTACTTGAAGACTGTGTGCAGTTGCCAGTTCGTCTCCCTGCTGTCTTTGAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS-3UTR CAA 90 bp CTTGAGACTGTTAAGGCACAAAACCTGGTAGACGCTGCTGTTGGTGGCCTGCACAGTAACAGAAAGTTCTaGATCCTCCGAATGCTGACG +
Preference number: 5 (lower is better)
Translates to: LETVKAQNLVDAAVGGLHSNRKF*ILRMLT
Trigger: CGTCAGCATTCGGAGGATCAAGAACTTTCTGTTACT...GTGCAGGCCACCAACAGCAGCGTCTACCAGGTTTTGTGCCTTAACAGTCTCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS-3UTR CAA 90 bp AGCTCAAAGACAGCAGGGAGACGAACTGGCAACTGCACACAGTCTTCAAGTAAAACTGCTGAGACCAAATaGAGGCCTCGGAGAAGGTTC +
Preference number: 5 (lower is better)
Translates to: SSKTAGRRTGNCTQSSSKTAETK*RPRRRF
Trigger: GAACCTTCTCCGAGGCCTCAATTTGGTCTCAGCAGT...TTTACTTGAAGACTGTGTGCAGTTGCCAGTTCGTCTCCCTGCTGTCTTTGAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS GCA 90 bp AAGCAGCACGTAGCTAGTGAAGGTCACGAACAGGATGACTTTGTTTaGGATGAAAAACGACGCCATGTTCATCCCTCTGAGGTAGGAGCT +
Preference number: 5 (lower is better)
Translates to: KQHVASEGHEQDDFV*DEKRRHVHPSEVGA
Trigger: AGCTCCTACCTCAGAGGGATGAACATGGCGTCGTTTTTCATCGCAAACAAAGTCATCCTGTTCGTGACCTTCACTAGCTACGTGCTGCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS-3UTR CAA 90 bp CCATTAGTGGTCAGAGCTAAACTAATCTGGATGGGCTTTAGAAAGCGTGGCTTGGGACTGTCTAGTGCCTaGTCCCAGAAAGCGGTGAAA +
Preference number: 5 (lower is better)
Translates to: PLVVRAKLIWMGFRKRGLGLSSA*SQKAVK
Trigger: TTTCACCGCTTTCTGGGACAAGGCACTAGACAGTCC...CAAGCCACGCTTTCTAAAGCCCATCCAGATTAGTTTAGCTCTGACCACTAATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS CCA 90 bp TCCCGATTGGATTTCTGTCGAAGAACAACACGGGAGCCTTCAGTATaGACTCAAACATCCTGTTGTGCAAAGTCTGGGAAGCGTTCACAA +
Preference number: 5 (lower is better)
Translates to: SRLDFCRRTTREPSV*TQTSCCAKSGKRSQ
Trigger: TTGTGAACGCTTCCCAGACTTTGCACAACAGGATGTTTGAGTCCATACTGAAGGCTCCCGTGTTGTTCTTCGACAGAAATCCAATCGGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS-3UTR CAA 90 bp CTTGAGACTGTTAAGGCACAAAACCTGGTAGACGCTGCTGTTGGTGGCCTGCACGAAAGTGCAAGAAGATaGTCACTTGGTCGAATTTGT +
Preference number: 5 (lower is better)
Translates to: LETVKAQNLVDAAVGGLHESARR*SLGRIC
Trigger: ACAAATTCGACCAAGTGACAATCTTCTTGCACTTTC...GTGCAGGCCACCAACAGCAGCGTCTACCAGGTTTTGTGCCTTAACAGTCTCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS-3UTR CAA 90 bp CCATTAGTGGTCAGAGCTAAACTAATCTGGATGGGCTTTAGAAAGCGTGGCTTGACGTGGACAATGGCTTaGCCATCAGATGGTACATGG +
Preference number: 5 (lower is better)
Translates to: PLVVRAKLIWMGFRKRGLTWTMA*PSDGTW
Trigger: CCATGTACCATCTGATGGCAAAGCCATTGTCCACGT...CAAGCCACGCTTTCTAAAGCCCATCCAGATTAGTTTAGCTCTGACCACTAATGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS-3UTR CAA 90 bp TCCAAAGACAACAGTCTCTCGTCTGTGAAGGATCTGTGGCAGAAAGAAAGGAAAGGACTGTCTAGTGCCTaGTCCCAGAAAGCGGTGAAA +
Preference number: 5 (lower is better)
Translates to: SKDNSLSSVKDLWQKERKGLSSA*SQKAVK
Trigger: TTTCACCGCTTTCTGGGACAAGGCACTAGACAGTCC...TTTCCTTTCTTTCTGCCACAGATCCTTCACAGACGAGAGACTGTTGTCTTTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS-3UTR CAA 90 bp CCATTAGTGGTCAGAGCTAAACTAATCTGGATGGGCTTTAGAAAGCGTGGCTTGAAAGACCTTGCAGGGTaGGACTGTCTAGTGCCTTGT +
Preference number: 5 (lower is better)
Translates to: PLVVRAKLIWMGFRKRGLKDLAG*DCLVPC
Trigger: ACAAGGCACTAGACAGTCCAACCCTGCAAGGTCTTT...CAAGCCACGCTTTCTAAAGCCCATCCAGATTAGTTTAGCTCTGACCACTAATGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS-3UTR CAA 90 bp AGCTCAAAGACAGCAGGGAGACGAACTGGCAACTGCACACAGTCTTCAAGTAAATTCCCAAATAAAATATaGCTCCTCACGGTGCCCGAG +
Preference number: 5 (lower is better)
Translates to: SSKTAGRRTGNCTQSSSKFPNKI*LLTVPE
Trigger: CTCGGGCACCGTGAGGAGCAATATTTTATTTGGGAA...TTTACTTGAAGACTGTGTGCAGTTGCCAGTTCGTCTCCCTGCTGTCTTTGAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS-3UTR CAA 90 bp TCCAAAGACAACAGTCTCTCGTCTGTGAAGGATCTGTGGCAGAAAGAAAGGAAAAGTTGGAACAGGTGCTaGCCCACTTCTGCATCGACA +
Preference number: 5 (lower is better)
Translates to: SKDNSLSSVKDLWQKERKSWNRC*PTSAST
Trigger: TGTCGATGCAGAAGTGGGCAAGCACCTGTTCCAACT...TTTCCTTTCTTTCTGCCACAGATCCTTCACAGACGAGAGACTGTTGTCTTTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS-3UTR CAA 90 bp TCCAAAGACAACAGTCTCTCGTCTGTGAAGGATCTGTGGCAGAAAGAAAGGAAAACTGCTGAGACCAAATaGAGGCCTCGGAGAAGGTTC +
Preference number: 5 (lower is better)
Translates to: SKDNSLSSVKDLWQKERKTAETK*RPRRRF
Trigger: GAACCTTCTCCGAGGCCTCAATTTGGTCTCAGCAGT...TTTCCTTTCTTTCTGCCACAGATCCTTCACAGACGAGAGACTGTTGTCTTTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS-3UTR CAA 90 bp TCCAAAGACAACAGTCTCTCGTCTGTGAAGGATCTGTGGCAGAAAGAAAGGAAATCGTCCGTGTGCTCATaGAAGGGGTCCAGGTTTTTC +
Preference number: 5 (lower is better)
Translates to: SKDNSLSSVKDLWQKERKSSVCS*KGSRFF
Trigger: GAAAAACCTGGACCCCTTCAATGAGCACACGGACGA...TTTCCTTTCTTTCTGCCACAGATCCTTCACAGACGAGAGACTGTTGTCTTTGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS-3UTR CAA 90 bp CTTGAGACTGTTAAGGCACAAAACCTGGTAGACGCTGCTGTTGGTGGCCTGCACTCCAAAACCATTATCTaGTCACTGTCAATGATGGTG +
Preference number: 5 (lower is better)
Translates to: LETVKAQNLVDAAVGGLHSKTII*SLSMMV
Trigger: CACCATCATTGACAGTGACAAGATAATGGTTTTGGA...GTGCAGGCCACCAACAGCAGCGTCTACCAGGTTTTGTGCCTTAACAGTCTCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS-3UTR CAA 90 bp AGCTCAAAGACAGCAGGGAGACGAACTGGCAACTGCACACAGTCTTCAAGTAAATTCGCCCTTGCCCAGTaGCTGAACCATCTTGTAAAA +
Preference number: 5 (lower is better)
Translates to: SSKTAGRRTGNCTQSSSKFALAQ*LNHLVK
Trigger: TTTTACAAGATGGTTCAGCAACTGGGCAAGGGCGAA...TTTACTTGAAGACTGTGTGCAGTTGCCAGTTCGTCTCCCTGCTGTCTTTGAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS CCA 90 bp TTCGCCCTTGCCCAGTTGCTGAACCATCTTGTAAAAGAGGCTCTCTaGATTCTGCAGCAAGACATACGGCTCATCATATTCTTTCAGTCT +
Preference number: 5 (lower is better)
Translates to: FALAQLLNHLVKEAL*ILQQDIRLIIFFQS
Trigger: AGACTGAAAGAATATGATGAGCCGTATGTCTTGCTGCAGAATCCAGAGAGCCTCTTTTACAAGATGGTTCAGCAACTGGGCAAGGGCGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS-3UTR CAA 90 bp CCATTAGTGGTCAGAGCTAAACTAATCTGGATGGGCTTTAGAAAGCGTGGCTTGGAAAGCGGTGAAATCTaGCACGTGGACAATGGCTTT +
Preference number: 5 (lower is better)
Translates to: PLVVRAKLIWMGFRKRGLESGEI*HVDNGF
Trigger: AAAGCCATTGTCCACGTGCAAGATTTCACCGCTTTC...CAAGCCACGCTTTCTAAAGCCCATCCAGATTAGTTTAGCTCTGACCACTAATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS-3UTR CAA 90 bp AAAATCCAAAGACAACAGTCTCTCGTCTGTGAAGGATCTGTGGCAGAAAGAAAGAGTTGGAACAGGTGCTaGCCCACTTCTGCATCGACA +
Preference number: 5 (lower is better)
Translates to: KIQRQQSLVCEGSVAERKSWNRC*PTSAST
Trigger: TGTCGATGCAGAAGTGGGCAAGCACCTGTTCCAACT...CTTTCTTTCTGCCACAGATCCTTCACAGACGAGAGACTGTTGTCTTTGGATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS CCA 90 bp CCAGGAACGTCAGGGGAAGCAAATCATCCATGTGTCCGATGTCTTTaGAGAAACGATTTAAAATCCTCCCGATTGGATTTCTGTCGAAGA +
Preference number: 5 (lower is better)
Translates to: PGTSGEANHPCVRCL*RNDLKSSRLDFCRR
Trigger: TCTTCGACAGAAATCCAATCGGGAGGATTTTAAATCGTTTCTCCAAAGACATCGGACACATGGATGATTTGCTTCCCCTGACGTTCCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS-3UTR CAA 90 bp TCCAAAGACAACAGTCTCTCGTCTGTGAAGGATCTGTGGCAGAAAGAAAGGAAAGAGCTGCCCAGAATCTaGGAAATCTCCTTCTTTCTC +
Preference number: 5 (lower is better)
Translates to: SKDNSLSSVKDLWQKERKELPRI*EISFFL
Trigger: GAGAAAGAAGGAGATTTCCAAGATTCTGGGCAGCTC...TTTCCTTTCTTTCTGCCACAGATCCTTCACAGACGAGAGACTGTTGTCTTTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS-3UTR CAA 90 bp TCCAAAGACAACAGTCTCTCGTCTGTGAAGGATCTGTGGCAGAAAGAAAGGAAAGAAAGCGGTGAAATCTaGCACGTGGACAATGGCTTT +
Preference number: 5 (lower is better)
Translates to: SKDNSLSSVKDLWQKERKESGEI*HVDNGF
Trigger: AAAGCCATTGTCCACGTGCAAGATTTCACCGCTTTC...TTTCCTTTCTTTCTGCCACAGATCCTTCACAGACGAGAGACTGTTGTCTTTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS-3UTR CAA 90 bp TCCAAAGACAACAGTCTCTCGTCTGTGAAGGATCTGTGGCAGAAAGAAAGGAAATTCAGAGCACAGGCCTaGATCACTTTCTCATATCGC +
Preference number: 5 (lower is better)
Translates to: SKDNSLSSVKDLWQKERKFRAQA*ITFSYR
Trigger: GCGATATGAGAAAGTGATCAAGGCCTGTGCTCTGAA...TTTCCTTTCTTTCTGCCACAGATCCTTCACAGACGAGAGACTGTTGTCTTTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS-3UTR CAA 90 bp CCATTAGTGGTCAGAGCTAAACTAATCTGGATGGGCTTTAGAAAGCGTGGCTTGGAAGCCCAATTTCGGTaGTCAAGATCTTATCGATCC +
Preference number: 5 (lower is better)
Translates to: PLVVRAKLIWMGFRKRGLEAQFR*SRSYRS
Trigger: GGATCGATAAGATCTTGACAACCGAAATTGGGCTTC...CAAGCCACGCTTTCTAAAGCCCATCCAGATTAGTTTAGCTCTGACCACTAATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS-3UTR CAA 90 bp CCATTAGTGGTCAGAGCTAAACTAATCTGGATGGGCTTTAGAAAGCGTGGCTTGATGCTGTTTCAAATATaGTTAAGGCCGAGGGCTGTC +
Preference number: 5 (lower is better)
Translates to: PLVVRAKLIWMGFRKRGLMLFQI*LRPRAV
Trigger: GACAGCCCTCGGCCTTAACAATATTTGAAACAGCAT...CAAGCCACGCTTTCTAAAGCCCATCCAGATTAGTTTAGCTCTGACCACTAATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS-3UTR CAA 90 bp AGCTCAAAGACAGCAGGGAGACGAACTGGCAACTGCACACAGTCTTCAAGTAAAGAAAGTGCAAGAAGATaGTCACTTGGTCGAATTTGT +
Preference number: 5 (lower is better)
Translates to: SSKTAGRRTGNCTQSSSKESARR*SLGRIC
Trigger: ACAAATTCGACCAAGTGACAATCTTCTTGCACTTTC...TTTACTTGAAGACTGTGTGCAGTTGCCAGTTCGTCTCCCTGCTGTCTTTGAGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS-3UTR CAA 90 bp AAAATCCAAAGACAACAGTCTCTCGTCTGTGAAGGATCTGTGGCAGAAAGAAAGGAGCTGCCCAGAATCTaGGAAATCTCCTTCTTTCTC +
Preference number: 5 (lower is better)
Translates to: KIQRQQSLVCEGSVAERKELPRI*EISFFL
Trigger: GAGAAAGAAGGAGATTTCCAAGATTCTGGGCAGCTC...CTTTCTTTCTGCCACAGATCCTTCACAGACGAGAGACTGTTGTCTTTGGATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS-3UTR CAA 90 bp AGCTCAAAGACAGCAGGGAGACGAACTGGCAACTGCACACAGTCTTCAAGTAAATGTCCAACACTGAAATaGGATCCAGATTCTGCTAAT +
Preference number: 5 (lower is better)
Translates to: SSKTAGRRTGNCTQSSSKCPTLK*DPDSAN
Trigger: ATTAGCAGAATCTGGATCCAATTTCAGTGTTGGACA...TTTACTTGAAGACTGTGTGCAGTTGCCAGTTCGTCTCCCTGCTGTCTTTGAGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS-3UTR CAA 90 bp AGCTCAAAGACAGCAGGGAGACGAACTGGCAACTGCACACAGTCTTCAAGTAAATCCAAAACCATTATCTaGTCACTGTCAATGATGGTG +
Preference number: 5 (lower is better)
Translates to: SSKTAGRRTGNCTQSSSKSKTII*SLSMMV
Trigger: CACCATCATTGACAGTGACAAGATAATGGTTTTGGA...TTTACTTGAAGACTGTGTGCAGTTGCCAGTTCGTCTCCCTGCTGTCTTTGAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS-3UTR CAA 90 bp TCCAAAGACAACAGTCTCTCGTCTGTGAAGGATCTGTGGCAGAAAGAAAGGAAAATGCTGTTTCAAATATaGTTAAGGCCGAGGGCTGTC +
Preference number: 5 (lower is better)
Translates to: SKDNSLSSVKDLWQKERKMLFQI*LRPRAV
Trigger: GACAGCCCTCGGCCTTAACAATATTTGAAACAGCAT...TTTCCTTTCTTTCTGCCACAGATCCTTCACAGACGAGAGACTGTTGTCTTTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS TCA 90 bp AGCTGCCCAGAATCTTGGAAATCTCCTTCTTTCTCAGATTGGCAATaGGGTCAGCAAACGATTTCTCCCACGCATACATCTTTATTATCC +
Preference number: 5 (lower is better)
Translates to: SCPESWKSPSFSDWQ*GQQTISPTHTSLLS
Trigger: GGATAATAAAGATGTATGCGTGGGAGAAATCGTTTGCTGACCTCATTGCCAATCTGAGAAAGAAGGAGATTTCCAAGATTCTGGGCAGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS-3UTR CAA 90 bp AAAATCCAAAGACAACAGTCTCTCGTCTGTGAAGGATCTGTGGCAGAAAGAAAGAGTAACAGAAAGTTCTaGATCCTCCGAATGCTGACG +
Preference number: 5 (lower is better)
Translates to: KIQRQQSLVCEGSVAERKSNRKF*ILRMLT
Trigger: CGTCAGCATTCGGAGGATCAAGAACTTTCTGTTACT...CTTTCTTTCTGCCACAGATCCTTCACAGACGAGAGACTGTTGTCTTTGGATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS-3UTR CAA 90 bp AAAATCCAAAGACAACAGTCTCTCGTCTGTGAAGGATCTGTGGCAGAAAGAAAGGAAGCCCAATTTCGGTaGTCAAGATCTTATCGATCC +
Preference number: 5 (lower is better)
Translates to: KIQRQQSLVCEGSVAERKEAQFR*SRSYRS
Trigger: GGATCGATAAGATCTTGACAACCGAAATTGGGCTTC...CTTTCTTTCTGCCACAGATCCTTCACAGACGAGAGACTGTTGTCTTTGGATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS-3UTR CAA 90 bp CCATTAGTGGTCAGAGCTAAACTAATCTGGATGGGCTTTAGAAAGCGTGGCTTGATGTGTCCGATGTCTTaGGAGAAACGATTTAAAATC +
Preference number: 5 (lower is better)
Translates to: PLVVRAKLIWMGFRKRGLMCPMS*EKRFKI
Trigger: GATTTTAAATCGTTTCTCCAAAGACATCGGACACAT...CAAGCCACGCTTTCTAAAGCCCATCCAGATTAGTTTAGCTCTGACCACTAATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS TCA 90 bp AGAACAGGTTCCTGTGGTATGATTGACATTTTCTTCCTTAAGTCGTaGAGCCCAATTTCGGTTGTCAAGATCTTATCGATCCAGATTTTC +
Preference number: 5 (lower is better)
Translates to: RTGSCGMIDIFFLKS*SPISVVKILSIQIF
Trigger: GAAAATCTGGATCGATAAGATCTTGACAACCGAAATTGGGCTTCACGACTTAAGGAAGAAAATGTCAATCATACCACAGGAACCTGTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS-3UTR CAA 90 bp AAAATCCAAAGACAACAGTCTCTCGTCTGTGAAGGATCTGTGGCAGAAAGAAAGATGTGTCCGATGTCTTaGGAGAAACGATTTAAAATC +
Preference number: 5 (lower is better)
Translates to: KIQRQQSLVCEGSVAERKMCPMS*EKRFKI
Trigger: GATTTTAAATCGTTTCTCCAAAGACATCGGACACAT...CTTTCTTTCTGCCACAGATCCTTCACAGACGAGAGACTGTTGTCTTTGGATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS GCA 72 bp CTCCCTTCCGAACGGCTCTCCTCGGGTTGCACTGCCTaGGTGTTCTCTGCGTCTTGGCCCTCTGGGGCCCCG +
Preference number: 6 (lower is better)
Translates to: LPSERLSSGCTA*VFSASWPSGAP
Trigger: CGGGGCCCCAGAGGGCCAAGACGCAGAGAACACGCAGGCAGTGCAACCCGAGGAGAGCCGTTCGGAAGGGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS GCA 72 bp CTCCCTCGTGGGGCCAGCCTGGGGGTGGGCGCTTCTTaGACTCCCAAGGCGCCTCCTTCTCTAGGTCCGTGT +
Preference number: 6 (lower is better)
Translates to: LPRGASLGVGAS*TPKAPPSLGPC
Trigger: ACACGGACCTAGAGAAGGAGGCGCCTTGGGAGTGCAAGAAGCGCCCACCCCCAGGCTGGCCCCACGAGGGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS CAA 72 bp ACTCCCTCGTGGGGCCAGCCTGGGGGTGGGCGCTTCTaGCACTCCCAAGGCGCCTCCTTCTCTAGGTCCGTG +
Preference number: 6 (lower is better)
Translates to: TPSWGQPGGGRF*HSQGASFSRSV
Trigger: CACGGACCTAGAGAAGGAGGCGCCTTGGGAGTGCAAGAAGCGCCCACCCCCAGGCTGGCCCCACGAGGGAGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS TCA 72 bp GCTGCTGAGAAACGTAGGCGATCCTCCCGTGCACGCTaGCCAGCCCGCTGGCAGGAGGCAGCTCACCCAGCA +
Preference number: 6 (lower is better)
Translates to: AAEKRRRSSRAR*PARWQEAAHPA
Trigger: TGCTGGGTGAGCTGCCTCCTGCCAGCGGGCTGGTCAGCGTGCACGGGAGGATCGCCTACGTTTCTCAGCAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS CCA 72 bp GAAGACGATGACTCCCTCGTGGGGCCAGCCTGGGGGTaGGCGCTTCTTGCACTCCCAAGGCGCCTCCTTCTC +
Preference number: 6 (lower is better)
Translates to: EDDDSLVGPAWG*ALLALPRRLLL
Trigger: GAGAAGGAGGCGCCTTGGGAGTGCAAGAAGCGCCCACCCCCAGGCTGGCCCCACGAGGGAGTCATCGTCTTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS GCA 72 bp CACCAGAAGAACACGCGCGAGCAGAGGTTGGCGTCCTaGAGCGGGTTGGGTTTCACCTCGGTGTGCACCGGC +
Preference number: 6 (lower is better)
Translates to: HQKNTREQRLAS*SGLGFTSVCTG
Trigger: GCCGGTGCACACCGAGGTGAAACCCAACCCGCTGCAGGACGCCAACCTCTGCTCGCGCGTGTTCTTCTGGTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS CAA 90 bp GTAGGCCTTGAAGCCGATTCTCCCTTCCGAACGGCTCTCCTCGGGTaGCACTGCCTGCGTGTTCTCTGCGTCTTGGCCCTCTGGGGCCCC +
Preference number: 6 (lower is better)
Translates to: VGLEADSPFRTALLG*HCLRVLCVLALWGP
Trigger: GGGGCCCCAGAGGGCCAAGACGCAGAGAACACGCAGGCAGTGCAACCCGAGGAGAGCCGTTCGGAAGGGAGAATCGGCTTCAAGGCCTAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS GCA 72 bp ACGGCTCTCCTCGGGTTGCACTGCCTGCGTGTTCTCTaGGTCTTGGCCCTCTGGGGCCCCGTCTTTCAACGA +
Preference number: 6 (lower is better)
Translates to: TALLGLHCLRVL*VLALWGPVFQR
Trigger: TCGTTGAAAGACGGGGCCCCAGAGGGCCAAGACGCAGAGAACACGCAGGCAGTGCAACCCGAGGAGAGCCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS GCA 72 bp GATTCTCCCTTCCGAACGGCTCTCCTCGGGTTGCACTaGCTGCGTGTTCTCTGCGTCTTGGCCCTCTGGGGC +
Preference number: 6 (lower is better)
Translates to: DSPFRTALLGLH*LRVLCVLALWG
Trigger: GCCCCAGAGGGCCAAGACGCAGAGAACACGCAGGCAGTGCAACCCGAGGAGAGCCGTTCGGAAGGGAGAATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS CCA 72 bp TCCTCGGGTTGCACTGCCTGCGTGTTCTCTGCGTCTTaGCCCTCTGGGGCCCCGTCTTTCAACGAGGGTCTG +
Preference number: 6 (lower is better)
Translates to: SSGCTACVFSAS*PSGAPSFNEGL
Trigger: CAGACCCTCGTTGAAAGACGGGGCCCCAGAGGGCCAAGACGCAGAGAACACGCAGGCAGTGCAACCCGAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS CAA 72 bp CTCCTCGGGTTGCACTGCCTGCGTGTTCTCTGCGTCTaGGCCCTCTGGGGCCCCGTCTTTCAACGAGGGTCT +
Preference number: 6 (lower is better)
Translates to: LLGLHCLRVLCV*ALWGPVFQRGS
Trigger: AGACCCTCGTTGAAAGACGGGGCCCCAGAGGGCCAAGACGCAGAGAACACGCAGGCAGTGCAACCCGAGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS CAA 90 bp TTAAACAGCGGGTTGAGCCACCAGAAGAACACGCGCGAGCAGAGGTaGGCGTCCTGCAGCGGGTTGGGTTTCACCTCGGTGTGCACCGGC +
Preference number: 6 (lower is better)
Translates to: LNSGLSHQKNTREQR*ASCSGLGFTSVCTG
Trigger: GCCGGTGCACACCGAGGTGAAACCCAACCCGCTGCAGGACGCCAACCTCTGCTCGCGCGTGTTCTTCTGGTGGCTCAACCCGCTGTTTAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS CAA 90 bp AAGACGATGACTCCCTCGTGGGGCCAGCCTGGGGGTGGGCGCTTCTaGCACTCCCAAGGCGCCTCCTTCTCTAGGTCCGTGTACTCAATC +
Preference number: 6 (lower is better)
Translates to: KTMTPSWGQPGGGRF*HSQGASFSRSVYSI
Trigger: GATTGAGTACACGGACCTAGAGAAGGAGGCGCCTTGGGAGTGCAAGAAGCGCCCACCCCCAGGCTGGCCCCACGAGGGAGTCATCGTCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS GCA 72 bp AAGGAGGTAGATGTCGGCGTCCTGGTAGACGGCCCGTaGCAGGTTCACCCGAGCTTTCTGGCCTCCACTCAG +
Preference number: 6 (lower is better)
Translates to: KEVDVGVLVDGP*QVHPSFLASTQ
Trigger: CTGAGTGGAGGCCAGAAAGCTCGGGTGAACCTGGCACGGGCCGTCTACCAGGACGCCGACATCTACCTCCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS CAA 72 bp GGCAGCTCACCCAGCACTGCGCTCAACAGCGACGACTaGCCTGCTCCAACTGGGCCAACCACGGCTAACAAC +
Preference number: 6 (lower is better)
Translates to: GSSPSTALNSDD*PAPTGPTTANN
Trigger: GTTGTTAGCCGTGGTTGGCCCAGTTGGAGCAGGCAAGTCGTCGCTGTTGAGCGCAGTGCTGGGTGAGCTGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS CCA 72 bp TTCCTATCTCCACCCAGAGGAGGACGGTTACCGCGATaGCCTGCAGCGGCCCTGCCCACAGAAAGTGCAAGA +
Preference number: 6 (lower is better)
Translates to: FLSPPRGGRLPR*PAAALPTESAR
Trigger: TCTTGCACTTTCTGTGGGCAGGGCCGCTGCAGGCCATCGCGGTAACCGTCCTCCTCTGGGTGGAGATAGGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS CCA 72 bp GTGAAGTTCACATTGTCGAAGACGATGACTCCCTCGTaGGGCCAGCCTGGGGGTGGGCGCTTCTTGCACTCC +
Preference number: 6 (lower is better)
Translates to: VKFTLSKTMTPS*GQPGGGRFLHS
Trigger: GGAGTGCAAGAAGCGCCCACCCCCAGGCTGGCCCCACGAGGGAGTCATCGTCTTCGACAATGTGAACTTCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS GCA 72 bp GAGGAGGACGGTTACCGCGATGGCCTGCAGCGGCCCTaGCCACAGAAAGTGCAAGAAGATTGTCACTTGGTC +
Preference number: 6 (lower is better)
Translates to: EEDGYRDGLQRP*PQKVQEDCHLV
Trigger: GACCAAGTGACAATCTTCTTGCACTTTCTGTGGGCAGGGCCGCTGCAGGCCATCGCGGTAACCGTCCTCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS GCA 72 bp ATCTCCACCCAGAGGAGGACGGTTACCGCGATGGCCTaGAGCGGCCCTGCCCACAGAAAGTGCAAGAAGATT +
Preference number: 6 (lower is better)
Translates to: ISTQRRTVTAMA*SGPAHRKCKKI
Trigger: AATCTTCTTGCACTTTCTGTGGGCAGGGCCGCTGCAGGCCATCGCGGTAACCGTCCTCCTCTGGGTGGAGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS CCA 72 bp TTAACCGGAGTGCCTTCCGGTAAATCATGTGGCACATaGCAACCCGCAGCCTCATCCCGGCGCACTGCACGT +
Preference number: 6 (lower is better)
Translates to: LTGVPSGKSCGT*QPAASSRRTAR
Trigger: ACGTGCAGTGCGCCGGGATGAGGCTGCGGGTTGCCATGTGCCACATGATTTACCGGAAGGCACTCCGGTTAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036554.14
CDS CCA 72 bp CTTGGCCCTCTGGGGCCCCGTCTTTCAACGAGGGTCTaGATGACTGCTGAGACCAAATTGAGGCCTCGGAGA +
Preference number: 6 (lower is better)
Translates to: LGPLGPRLSTRV*MTAETKLRPRR
Trigger: TCTCCGAGGCCTCAATTTGGTCTCAGCAGTCATCCAGACCCTCGTTGAAAGACGGGGCCCCAGAGGGCCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS TCA 72 bp GGAACAGGTGCTTGCCCACTTCTGCATCGACAGCGCTaGGCGGATCATCAAGGAGGTAGATGTCGGCGTCCT +
Preference number: 6 (lower is better)
Translates to: GTGACPLLHRQR*ADHQGGRCRRP
Trigger: AGGACGCCGACATCTACCTCCTTGATGATCCGCTCAGCGCTGTCGATGCAGAAGTGGGCAAGCACCTGTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS TCA 72 bp AGGATGCGCCCGCCGAGAAGTAATTCTTGTAGGCCTTaGAGCCGATTCTCCCTTCCGAACGGCTCTCCTCGG +
Preference number: 6 (lower is better)
Translates to: RMRPPRSNSCRP*SRFSLPNGSPR
Trigger: CCGAGGAGAGCCGTTCGGAAGGGAGAATCGGCTTCAAGGCCTACAAGAATTACTTCTCGGCGGGCGCATCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS CCA 72 bp CGGATGGTCCAGAGTCCCTGGAGGGAGGACGATAAATaGGAGAATACCGGGCTCCGTGTTGTGGATTCCAGG +
Preference number: 6 (lower is better)
Translates to: RMVQSPWREDDK*ENTGLRVVDSR
Trigger: CCTGGAATCCACAACACGGAGCCCGGTATTCTCCCATTTATCGTCCTCCCTCCAGGGACTCTGGACCATCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS CCA 72 bp GCTCCTGACACCTCTCCTCAGCTTTGTAAGCCCGGATaGTCCAGAGTCCCTGGAGGGAGGACGATAAATGGG +
Preference number: 6 (lower is better)
Translates to: APDTSPQLCKPG*SRVPGGRTING
Trigger: CCCATTTATCGTCCTCCCTCCAGGGACTCTGGACCATCCGGGCTTACAAAGCTGAGGAGAGGTGTCAGGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS TCA 72 bp CCTGGCATCCGTGAAAGCCGCAGTTTTACTCCGCAGTaGCGAGAACAGCTTCCCGATGCAGCTTTGCAGAGG +
Preference number: 6 (lower is better)
Translates to: PGIRESRSFTPQ*REQLPDAALQR
Trigger: CCTCTGCAAAGCTGCATCGGGAAGCTGTTCTCGTCACTGCGGAGTAAAACTGCGGCTTTCACGGATGCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS GCA 72 bp CTCCGCAGTGACGAGAACAGCTTCCCGATGCAGCTTTaGAGAGGCAGAAGAATAACCAGAACGGCCAAGCCC +
Preference number: 6 (lower is better)
Translates to: LRSDENSFPMQL*RGRRITRTAKP
Trigger: GGGCTTGGCCGTTCTGGTTATTCTTCTGCCTCTGCAAAGCTGCATCGGGAAGCTGTTCTCGTCACTGCGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS CAA 72 bp TCCAAGGCCCTCCACAGCTCCTCGTCCGTGTGCTCATaGAAGGGGTCCAGGTTTTTCCTCATGGTTCCAGTG +
Preference number: 6 (lower is better)
Translates to: SKALHSSSSVCS*KGSRFFLMVPV
Trigger: CACTGGAACCATGAGGAAAAACCTGGACCCCTTCAATGAGCACACGGACGAGGAGCTGTGGAGGGCCTTGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS CAA 72 bp GGTGATCTTCTCGTGCAACGCCTGACAGATACACAGTaGGAACAGGTGCTTGCCCACTTCTGCATCGACAGC +
Preference number: 6 (lower is better)
Translates to: GDLLVQRLTDTQ*EQVLAHFCIDS
Trigger: GCTGTCGATGCAGAAGTGGGCAAGCACCTGTTCCAACTGTGTATCTGTCAGGCGTTGCACGAGAAGATCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS CAA 72 bp GAGAATACCGGGCTCCGTGTTGTGGATTCCAGGCGCTaGACATCCCGTGACGTCTCTAAGAAGTATCTCCGA +
Preference number: 6 (lower is better)
Translates to: ENTGLRVVDSRR*TSRDVSKKYLR
Trigger: TCGGAGATACTTCTTAGAGACGTCACGGGATGTCAAGCGCCTGGAATCCACAACACGGAGCCCGGTATTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS CAA 72 bp TGTTTCGGTGAGGGCAGCGGCTTCGCCCTTGCCCAGTaGCTGAACCATCTTGTAAAAGAGGCTCTCTGGATT +
Preference number: 6 (lower is better)
Translates to: CFGEGSGFALAQ*LNHLVKEALWI
Trigger: AATCCAGAGAGCCTCTTTTACAAGATGGTTCAGCAACTGGGCAAGGGCGAAGCCGCTGCCCTCACCGAAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS CAA 90 bp CTGTTTTGCTGTTTCGGTGAGGGCAGCGGCTTCGCCCTTGCCCAGTaGCTGAACCATCTTGTAAAAGAGGCTCTCTGGATTCTGCAGCAA +
Preference number: 6 (lower is better)
Translates to: LFCCFGEGSGFALAQ*LNHLVKEALWILQQ
Trigger: TTGCTGCAGAATCCAGAGAGCCTCTTTTACAAGATGGTTCAGCAACTGGGCAAGGGCGAAGCCGCTGCCCTCACCGAAACAGCAAAACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS TCA 72 bp CAGCGATCACACTTACGACGAGGAGCAACGTCTGGATaGAGTCCAGGAACGTCAGGGGAAGCAAATCATCCA +
Preference number: 6 (lower is better)
Translates to: QRSHLRRGATSG*SPGTSGEANHP
Trigger: TGGATGATTTGCTTCCCCTGACGTTCCTGGACTTCATCCAGACGTTGCTCCTCGTCGTAAGTGTGATCGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS TCA 72 bp AGAATACCGGGCTCCGTGTTGTGGATTCCAGGCGCTTaGCATCCCGTGACGTCTCTAAGAAGTATCTCCGAA +
Preference number: 6 (lower is better)
Translates to: RIPGSVLWIPGA*HPVTSLRSISE
Trigger: TTCGGAGATACTTCTTAGAGACGTCACGGGATGTCAAGCGCCTGGAATCCACAACACGGAGCCCGGTATTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS CAA 72 bp CCTGCAGCGGCCCTGCCCACAGAAAGTGCAAGAAGATaGTCACTTGGTCGAATTTGTTCACGTCGTTGGACA +
Preference number: 6 (lower is better)
Translates to: PAAALPTESARR*SLGRICSRRWT
Trigger: TGTCCAACGACGTGAACAAATTCGACCAAGTGACAATCTTCTTGCACTTTCTGTGGGCAGGGCCGCTGCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS CAA 90 bp GATAAATGGGAGAATACCGGGCTCCGTGTTGTGGATTCCAGGCGCTaGACATCCCGTGACGTCTCTAAGAAGTATCTCCGAAGAACCAGG +
Preference number: 6 (lower is better)
Translates to: DKWENTGLRVVDSRR*TSRDVSKKYLRRTR
Trigger: CCTGGTTCTTCGGAGATACTTCTTAGAGACGTCACGGGATGTCAAGCGCCTGGAATCCACAACACGGAGCCCGGTATTCTCCCATTTATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS CAA 90 bp CTGAGGTCTAGGGTCTCCGTTATATTTCCATTCGCATTTCTGGTGTaGTTCAGTGCACCTTGCTTGTTCGCCCAGTGGGAAAGCCACCAG +
Preference number: 6 (lower is better)
Translates to: LRSRVSVIFPFAFLV*FSAPCLFAQWESHQ
Trigger: CTGGTGGCTTTCCCACTGGGCGAACAAGCAAGGTGCACTGAACAACACCAGAAATGCGAATGGAAATATAACGGAGACCCTAGACCTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS TCA 72 bp CGTGGTAGAAGTACAAATGATGTAGTATGGCCAGGATaGGCGTGCACATGGACAGCACTGCTGCGTAGCCAT +
Preference number: 6 (lower is better)
Translates to: RGRSTNDVVWPG*ACTWTALLRSH
Trigger: ATGGCTACGCAGCAGTGCTGTCCATGTGCACGCTCATCCTGGCCATACTACATCATTTGTACTTCTACCACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036554.14
CDS TCA 72 bp CAAGATCTTATCGATCCAGATTTTCCCCTCGGGTTCTaGCAGCCTGAAGAGGGCCGAGATGAGGGAGCTTTT +
Preference number: 6 (lower is better)
Translates to: QDLIDPDFPLGF*QPEEGRDEGAF
Trigger: AAAAGCTCCCTCATCTCGGCCCTCTTCAGGCTGTCAGAACCCGAGGGGAAAATCTGGATCGATAAGATCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS GCA 72 bp AATATCTGGGTAATTCCGTCTGAAGTATACCTGTTTTaGTGTTTCGGTGAGGGCAGCGGCTTCGCCCTTGCC +
Preference number: 6 (lower is better)
Translates to: NIWVIPSEVYLF*CFGEGSGFALA
Trigger: GGCAAGGGCGAAGCCGCTGCCCTCACCGAAACAGCAAAACAGGTATACTTCAGACGGAATTACCCAGATATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS CCA 72 bp AGTGCCTTGTCCCAGAAAGCGGTGAAATCTTGCACGTaGACAATGGCTTTGCCATCAGATGGTACATGGGCT +
Preference number: 6 (lower is better)
Translates to: SALSQKAVKSCT*TMALPSDGTWA
Trigger: AGCCCATGTACCATCTGATGGCAAAGCCATTGTCCACGTGCAAGATTTCACCGCTTTCTGGGACAAGGCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS CAA 72 bp CGGCCCTGCCCACAGAAAGTGCAAGAAGATTGTCACTaGGTCGAATTTGTTCACGTCGTTGGACAGCAGGTT +
Preference number: 6 (lower is better)
Translates to: RPCPQKVQEDCH*VEFVHVVGQQV
Trigger: AACCTGCTGTCCAACGACGTGAACAAATTCGACCAAGTGACAATCTTCTTGCACTTTCTGTGGGCAGGGCCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS CAA 90 bp ACATGGGCTTTGCGCTGTGGTAGTTCATCGAGTAACAGAAAGTTCTaGATCCTCCGAATGCTGACGATGGCCTCTGACCCTCTCTCAATG +
Preference number: 6 (lower is better)
Translates to: TWALRCGSSSSNRKF*ILRMLTMASDPLSM
Trigger: CATTGAGAGAGGGTCAGAGGCCATCGTCAGCATTCGGAGGATCAAGAACTTTCTGTTACTCGATGAACTACCACAGCGCAAAGCCCATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS GCA 72 bp AACAACTCACCAGGCCTGGCAATAAAGGAAAGACCTTaGAGGGTTGGACTGTCTAGTGCCTTGTCCCAGAAA +
Preference number: 6 (lower is better)
Translates to: NNSPGLAIKERP*RVGLSSALSQK
Trigger: TTTCTGGGACAAGGCACTAGACAGTCCAACCCTGCAAGGTCTTTCCTTTATTGCCAGGCCTGGTGAGTTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS CAA 72 bp TTGCGCTGTGGTAGTTCATCGAGTAACAGAAAGTTCTaGATCCTCCGAATGCTGACGATGGCCTCTGACCCT +
Preference number: 6 (lower is better)
Translates to: LRCGSSSSNRKF*ILRMLTMASDP
Trigger: AGGGTCAGAGGCCATCGTCAGCATTCGGAGGATCAAGAACTTTCTGTTACTCGATGAACTACCACAGCGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS CAA 72 bp GCTGTTTCAAATATTGTTAAGGCCGAGGGCTGTCCATaGGAGGTGTTCATAACCGCGGGGCTGGTGAATGTA +
Preference number: 6 (lower is better)
Translates to: AVSNIVKAEGCP*EVFITAGLVNV
Trigger: TACATTCACCAGCCCCGCGGTTATGAACACCTCCAATGGACAGCCCTCGGCCTTAACAATATTTGAAACAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS TCA 72 bp AGGATGTGGCTTGCAGCTTTGAGGTACTGTAACTGGTaGGTCACTAAAATGGTGATCTTCTCGTGCAACGCC +
Preference number: 6 (lower is better)
Translates to: RMWLAALRYCNW*VTKMVIFSCNA
Trigger: GGCGTTGCACGAGAAGATCACCATTTTAGTGACTCACCAGTTACAGTACCTCAAAGCTGCAAGCCACATCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS GCA 72 bp CATATTTCTTCCCAAATAAAATATTGCTCCTCACGGTaGCCGAGAACACCCAGGGCTGCTGAGAAACGTAGG +
Preference number: 6 (lower is better)
Translates to: HISSQIKYCSSR*PRTPRAAEKRR
Trigger: CCTACGTTTCTCAGCAGCCCTGGGTGTTCTCGGGCACCGTGAGGAGCAATATTTTATTTGGGAAGAAATATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS CCA 72 bp TTGCCTTTGTTAAGGAGGGCTTCCTCGAGTCCTTCTTaGCTCGCAGAAGTTCTTTATCCCAGTACCGTTGAA +
Preference number: 6 (lower is better)
Translates to: LPLLRRASSSPS*LAEVLYPSTVE
Trigger: TTCAACGGTACTGGGATAAAGAACTTCTGCGAGCCAAGAAGGACTCGAGGAAGCCCTCCTTAACAAAGGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS CCA 72 bp GGTCTAGGGTCTCCGTTATATTTCCATTCGCATTTCTaGTGTTGTTCAGTGCACCTTGCTTGTTCGCCCAGT +
Preference number: 6 (lower is better)
Translates to: GLGSPLYFHSHF*CCSVHLACSPS
Trigger: ACTGGGCGAACAAGCAAGGTGCACTGAACAACACCAGAAATGCGAATGGAAATATAACGGAGACCCTAGACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS CAA 72 bp AGGGTCTCCGTTATATTTCCATTCGCATTTCTGGTGTaGTTCAGTGCACCTTGCTTGTTCGCCCAGTGGGAA +
Preference number: 6 (lower is better)
Translates to: RVSVIFPFAFLV*FSAPCLFAQWE
Trigger: TTCCCACTGGGCGAACAAGCAAGGTGCACTGAACAACACCAGAAATGCGAATGGAAATATAACGGAGACCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS CAA 90 bp CTCCGTTATATTTCCATTCGCATTTCTGGTGTTGTTCAGTGCACCTaGCTTGTTCGCCCAGTGGGAAAGCCACCAGTCCTGAAGAACATA +
Preference number: 6 (lower is better)
Translates to: LRYISIRISGVVQCT*LVRPVGKPPVLKNI
Trigger: TATGTTCTTCAGGACTGGTGGCTTTCCCACTGGGCGAACAAGCAAGGTGCACTGAACAACACCAGAAATGCGAATGGAAATATAACGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS CAA 90 bp AGAAAGTGCAAGAAGATTGTCACTTGGTCGAATTTGTTCACGTCGTaGGACAGCAGGTTAACTATCTGGCCTGTGGTTGTCTTCCCCATG +
Preference number: 6 (lower is better)
Translates to: RKCKKIVTWSNLFTS*DSRLTIWPVVVFPM
Trigger: CATGGGGAAGACAACCACAGGCCAGATAGTTAACCTGCTGTCCAACGACGTGAACAAATTCGACCAAGTGACAATCTTCTTGCACTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS TCA 72 bp ACTGAGAACATGTCATCTTCTTCCAGTCTCCGCTTATaGCCAGTTTTAAACAGCGGGTTGAGCCACCAGAAG +
Preference number: 6 (lower is better)
Translates to: TENMSSSSSLRL*PVLNSGLSHQK
Trigger: CTTCTGGTGGCTCAACCCGCTGTTTAAAACTGGTCATAAGCGGAGACTGGAAGAAGATGACATGTTCTCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS GCA 72 bp GTAGCTAGTGAAGGTCACGAACAGGATGACTTTGTTTaGGATGAAAAACGACGCCATGTTCATCCCTCTGAG +
Preference number: 6 (lower is better)
Translates to: VASEGHEQDDFV*DEKRRHVHPSE
Trigger: CTCAGAGGGATGAACATGGCGTCGTTTTTCATCGCAAACAAAGTCATCCTGTTCGTGACCTTCACTAGCTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS GCA 72 bp GGACAATGGCTTTGCCATCAGATGGTACATGGGCTTTaGGCTGTGGTAGTTCATCGAGTAACAGAAAGTTCT +
Preference number: 6 (lower is better)
Translates to: GQWLCHQMVHGL*AVVVHRVTESS
Trigger: AGAACTTTCTGTTACTCGATGAACTACCACAGCGCAAAGCCCATGTACCATCTGATGGCAAAGCCATTGTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS CCA 72 bp GATTTCTGTCGAAGAACAACACGGGAGCCTTCAGTATaGACTCAAACATCCTGTTGTGCAAAGTCTGGGAAG +
Preference number: 6 (lower is better)
Translates to: DFCRRTTREPSV*TQTSCCAKSGK
Trigger: CTTCCCAGACTTTGCACAACAGGATGTTTGAGTCCATACTGAAGGCTCCCGTGTTGTTCTTCGACAGAAATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS CCA 72 bp GCCCAGTTGCTGAACCATCTTGTAAAAGAGGCTCTCTaGATTCTGCAGCAAGACATACGGCTCATCATATTC +
Preference number: 6 (lower is better)
Translates to: AQLLNHLVKEAL*ILQQDIRLIIF
Trigger: GAATATGATGAGCCGTATGTCTTGCTGCAGAATCCAGAGAGCCTCTTTTACAAGATGGTTCAGCAACTGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS CAA 72 bp CTGCCCAGAATCTTGGAAATCTCCTTCTTTCTCAGATaGGCAATGAGGTCAGCAAACGATTTCTCCCACGCA +
Preference number: 6 (lower is better)
Translates to: LPRILEISFFLR*AMRSANDFSHA
Trigger: TGCGTGGGAGAAATCGTTTGCTGACCTCATTGCCAATCTGAGAAAGAAGGAGATTTCCAAGATTCTGGGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS CAA 90 bp TCCAGGAACGTCAGGGGAAGCAAATCATCCATGTGTCCGATGTCTTaGGAGAAACGATTTAAAATCCTCCCGATTGGATTTCTGTCGAAG +
Preference number: 6 (lower is better)
Translates to: SRNVRGSKSSMCPMS*EKRFKILPIGFLSK
Trigger: CTTCGACAGAAATCCAATCGGGAGGATTTTAAATCGTTTCTCCAAAGACATCGGACACATGGATGATTTGCTTCCCCTGACGTTCCTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS CCA 72 bp GGTGTTCATAACCGCGGGGCTGGTGAATGTAATATCTaGGTAATTCCGTCTGAAGTATACCTGTTTTGCTGT +
Preference number: 6 (lower is better)
Translates to: GVHNRGAGECNI*VIPSEVYLFCC
Trigger: ACAGCAAAACAGGTATACTTCAGACGGAATTACCCAGATATTACATTCACCAGCCCCGCGGTTATGAACACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS CAA 72 bp AAGAAGATTGTCACTTGGTCGAATTTGTTCACGTCGTaGGACAGCAGGTTAACTATCTGGCCTGTGGTTGTC +
Preference number: 6 (lower is better)
Translates to: KKIVTWSNLFTS*DSRLTIWPVVV
Trigger: GACAACCACAGGCCAGATAGTTAACCTGCTGTCCAACGACGTGAACAAATTCGACCAAGTGACAATCTTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS CAA 72 bp CACAGAAAGTGCAAGAAGATTGTCACTTGGTCGAATTaGTTCACGTCGTTGGACAGCAGGTTAACTATCTGG +
Preference number: 6 (lower is better)
Translates to: HRKCKKIVTWSN*FTSLDSRLTIW
Trigger: CCAGATAGTTAACCTGCTGTCCAACGACGTGAACAAATTCGACCAAGTGACAATCTTCTTGCACTTTCTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS TCA 72 bp TTCCCAAAATCAGGTAAGACTTCCAGTAACACTTTATaGTTGCCTTTGTTAAGGAGGGCTTCCTCGAGTCCT +
Preference number: 6 (lower is better)
Translates to: FPKSGKTSSNTL*LPLLRRASSSP
Trigger: AGGACTCGAGGAAGCCCTCCTTAACAAAGGCAATCATAAAGTGTTACTGGAAGTCTTACCTGATTTTGGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS TCA 72 bp GAATCTTGGAAATCTCCTTCTTTCTCAGATTGGCAATaGGGTCAGCAAACGATTTCTCCCACGCATACATCT +
Preference number: 6 (lower is better)
Translates to: ESWKSPSFSDWQ*GQQTISPTHTS
Trigger: AGATGTATGCGTGGGAGAAATCGTTTGCTGACCTCATTGCCAATCTGAGAAAGAAGGAGATTTCCAAGATTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS CCA 72 bp TCAGGGGAAGCAAATCATCCATGTGTCCGATGTCTTTaGAGAAACGATTTAAAATCCTCCCGATTGGATTTC +
Preference number: 6 (lower is better)
Translates to: SGEANHPCVRCL*RNDLKSSRLDF
Trigger: GAAATCCAATCGGGAGGATTTTAAATCGTTTCTCCAAAGACATCGGACACATGGATGATTTGCTTCCCCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS CAA 72 bp GTCAGGGGAAGCAAATCATCCATGTGTCCGATGTCTTaGGAGAAACGATTTAAAATCCTCCCGATTGGATTT +
Preference number: 6 (lower is better)
Translates to: VRGSKSSMCPMS*EKRFKILPIGF
Trigger: AAATCCAATCGGGAGGATTTTAAATCGTTTCTCCAAAGACATCGGACACATGGATGATTTGCTTCCCCTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2
CDS TCA 72 bp CAAGACATACGGCTCATCATATTCTTTCAGTCTTCCTaGATCCAAAACCATTATCTTGTCACTGTCAATGAT +
Preference number: 6 (lower is better)
Translates to: QDIRLIIFFQSS*IQNHYLVTVND
Trigger: ATCATTGACAGTGACAAGATAATGGTTTTGGATTCAGGAAGACTGAAAGAATATGATGAGCCGTATGTCTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000036554.14
ENSMUST00000166646.2