RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ABCC3 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000020865

Ensembl transcript IDs: ENSMUST00000021231.8, ENSMUST00000178136.8

Found 344 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GGACTCAGACAGCACCAGTACAGGGTCTCTGTTCCCGGGACAGACTaGCCTAGCAGTCCCTGGTCCAGGAGGAGAAAGGCTCATTTAAAA +
Preference number: 1 (lower is better)
Translates to: GLRQHQYRVSVPGTD*PSSPWSRRRKAHLK
Trigger: TTTTAAATGAGCCTTTCTCCTCCTGGACCAGGGACTGCTAGGTCAGTCTGTCCCGGGAACAGAGACCCTGTACTGGTGCTGTCTGAGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
3UTR CCA 90 bp AGGCAGGAGCAAGGTCTCTTAAAAACTGCAGTACAGGAATCATGGTaGACTAGACCAGGAGACCCAGGCACTGGTCAGAGCGTGGCTTTG +
Preference number: 1 (lower is better)
Translates to: RQEQGLLKTAVQESW*TRPGDPGTGQSVAL
Trigger: CAAAGCCACGCTCTGACCAGTGCCTGGGTCTCCTGGTCTAGTCCACCATGATTCCTGTACTGCAGTTTTTAAGAGACCTTGCTCCTGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
3UTR-3UTR CCA 90 bp CTACAGCTTTATTTCATCAGTGGACTCAGACAGCACCAGTACAGGGTCTCTGTTGTACAGGAATCATGGTaGACTAGACCAGGAGACCCA +
Preference number: 2 (lower is better)
Translates to: LQLYFISGLRQHQYRVSVVQESW*TRPGDP
Trigger: TGGGTCTCCTGGTCTAGTCCACCATGATTCCTGTAC...AACAGAGACCCTGTACTGGTGCTGTCTGAGTCCACTGATGAAATAAAGCTGTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
3UTR-3UTR TCA 90 bp GGAAAATATGCATATGTAGAGGCAGGAGCAAGGTCTCTTAAAAACTGCAGTACAGCCATCGAGTCCATCTaGCAAGGAAGAAACCCTTGG +
Preference number: 2 (lower is better)
Translates to: GKYAYVEAGARSLKNCSTAIESI*QGRNPW
Trigger: CCAAGGGTTTCTTCCTTGTCAGATGGACTCGATGGC...TGTACTGCAGTTTTTAAGAGACCTTGCTCCTGCCTCTACATATGCATATTTTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
3UTR-3UTR TCA 90 bp ATTGGAAAATATGCATATGTAGAGGCAGGAGCAAGGTCTCTTAAAAACTGCAGTGCCATCGAGTCCATCTaGCAAGGAAGAAACCCTTGG +
Preference number: 2 (lower is better)
Translates to: IGKYAYVEAGARSLKNCSAIESI*QGRNPW
Trigger: CCAAGGGTTTCTTCCTTGTCAGATGGACTCGATGGC...ACTGCAGTTTTTAAGAGACCTTGCTCCTGCCTCTACATATGCATATTTTCCAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
3UTR TCA 72 bp CAGCACCAGTACAGGGTCTCTGTTCCCGGGACAGACTaGCCTAGCAGTCCCTGGTCCAGGAGGAGAAAGGCT +
Preference number: 3 (lower is better)
Translates to: QHQYRVSVPGTD*PSSPWSRRRKA
Trigger: AGCCTTTCTCCTCCTGGACCAGGGACTGCTAGGTCAGTCTGTCCCGGGAACAGAGACCCTGTACTGGTGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
3UTR CCA 72 bp CAAGGTCTCTTAAAAACTGCAGTACAGGAATCATGGTaGACTAGACCAGGAGACCCAGGCACTGGTCAGAGC +
Preference number: 3 (lower is better)
Translates to: QGLLKTAVQESW*TRPGDPGTGQS
Trigger: GCTCTGACCAGTGCCTGGGTCTCCTGGTCTAGTCCACCATGATTCCTGTACTGCAGTTTTTAAGAGACCTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
3UTR CCA 72 bp GAGCAAGGTCTCTTAAAAACTGCAGTACAGGAATCATaGTGGACTAGACCAGGAGACCCAGGCACTGGTCAG +
Preference number: 3 (lower is better)
Translates to: EQGLLKTAVQES*WTRPGDPGTGQ
Trigger: CTGACCAGTGCCTGGGTCTCCTGGTCTAGTCCACCATGATTCCTGTACTGCAGTTTTTAAGAGACCTTGCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS-3UTR CCA 90 bp TCAGTGGACTCAGACAGCACCAGTACAGGGTCTCTGTTCCCGGGACAGACTGACGTGGGCGGCAGGTCCTaGGCCCAGGTGAAGGTGCCG +
Preference number: 4 (lower is better)
Translates to: SVDSDSTSTGSLFPGQTDVGGRS*AQVKVP
Trigger: CGGCACCTTCACCTGGGCCCAGGACCTGCCGCCCAC...GTCAGTCTGTCCCGGGAACAGAGACCCTGTACTGGTGCTGTCTGAGTCCACTGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS-3UTR TCA 90 bp TCAGTGGACTCAGACAGCACCAGTACAGGGTCTCTGTTCCCGGGACAGACTGACGACAGGAGCAGGGGATaGGCCATGGATCAGGCCGTG +
Preference number: 4 (lower is better)
Translates to: SVDSDSTSTGSLFPGQTDDRSRG*AMDQAV
Trigger: CACGGCCTGATCCATGGCTCATCCCCTGCTCCTGTC...GTCAGTCTGTCCCGGGAACAGAGACCCTGTACTGGTGCTGTCTGAGTCCACTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS-3UTR TCA 90 bp TCAGTGGACTCAGACAGCACCAGTACAGGGTCTCTGTTCCCGGGACAGACTGACCATTGCTCCAGGCGCTaGGCCACACATTGGCTCCGA +
Preference number: 4 (lower is better)
Translates to: SVDSDSTSTGSLFPGQTDHCSRR*ATHWLR
Trigger: TCGGAGCCAATGTGTGGCTCAGCGCCTGGAGCAATG...GTCAGTCTGTCCCGGGAACAGAGACCCTGTACTGGTGCTGTCTGAGTCCACTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS-3UTR TCA 90 bp TCAGTGGACTCAGACAGCACCAGTACAGGGTCTCTGTTCCCGGGACAGACTGACTGGATTCCAGCCGCTTaGGCTGCCGTGATGTGGCCA +
Preference number: 4 (lower is better)
Translates to: SVDSDSTSTGSLFPGQTDWIPAA*AAVMWP
Trigger: TGGCCACATCACGGCAGCTCAAGCGGCTGGAATCCA...GTCAGTCTGTCCCGGGAACAGAGACCCTGTACTGGTGCTGTCTGAGTCCACTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS-3UTR GCA 90 bp CATCAGTGGACTCAGACAGCACCAGTACAGGGTCTCTGTTCCCGGGACAGACTGATGACCAGGAGCCCTTaGAGTATCCCTAGGGCGGCG +
Preference number: 4 (lower is better)
Translates to: HQWTQTAPVQGLCSRDRLMTRSP*SIPRAA
Trigger: CGCCGCCCTAGGGATACTGCAAGGGCTCCTGGTCAT...CAGTCTGTCCCGGGAACAGAGACCCTGTACTGGTGCTGTCTGAGTCCACTGATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS-3UTR GCA 90 bp TCAGTGGACTCAGACAGCACCAGTACAGGGTCTCTGTTCCCGGGACAGACTGACCAGTGCGGCCCACAATaGCTACCTTCTCCCCACCCT +
Preference number: 4 (lower is better)
Translates to: SVDSDSTSTGSLFPGQTDQCGPQ*LPSPHP
Trigger: AGGGTGGGGAGAAGGTAGGCATTGTGGGCCGCACTG...GTCAGTCTGTCCCGGGAACAGAGACCCTGTACTGGTGCTGTCTGAGTCCACTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS-3UTR CCA 90 bp TCAGTGGACTCAGACAGCACCAGTACAGGGTCTCTGTTCCCGGGACAGACTGACTGCGGCCCGAGGGCGTaGTGTCAAAGAAGGACTGAG +
Preference number: 4 (lower is better)
Translates to: SVDSDSTSTGSLFPGQTDCGPRA*CQRRTE
Trigger: CTCAGTCCTTCTTTGACACCACGCCCTCGGGCCGCA...GTCAGTCTGTCCCGGGAACAGAGACCCTGTACTGGTGCTGTCTGAGTCCACTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS-3UTR TCA 90 bp CATCAGTGGACTCAGACAGCACCAGTACAGGGTCTCTGTTCCCGGGACAGACTGCCCTTCCGGAGCAGCTaGAGTTCACTCTGCCTGATC +
Preference number: 4 (lower is better)
Translates to: HQWTQTAPVQGLCSRDRLPFRSS*SSLCLI
Trigger: GATCAGGCAGAGTGAACTTCAGCTGCTCCGGAAGGG...CAGTCTGTCCCGGGAACAGAGACCCTGTACTGGTGCTGTCTGAGTCCACTGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS-3UTR TCA 90 bp TCATGGTGGACTAGACCAGGAGACCCAGGCACTGGTCAGAGCGTGGCTTTGAACGGGTGCAGATCCAGATaGAGGTGGAGATGGCCTGCA +
Preference number: 4 (lower is better)
Translates to: SWWTRPGDPGTGQSVALNGCRSR*RWRWPA
Trigger: TGCAGGCCATCTCCACCTTCATCTGGATCTGCACCC...GTTCAAAGCCACGCTCTGACCAGTGCCTGGGTCTCCTGGTCTAGTCCACCATGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS-3UTR TCA 90 bp TCAGTGGACTCAGACAGCACCAGTACAGGGTCTCTGTTCCCGGGACAGACTGACAGGCCGGTACCGCACTaGATAGTTCCGGAACTCCAC +
Preference number: 4 (lower is better)
Translates to: SVDSDSTSTGSLFPGQTDRPVPH*IVPELH
Trigger: GTGGAGTTCCGGAACTATTCAGTGCGGTACCGGCCT...GTCAGTCTGTCCCGGGAACAGAGACCCTGTACTGGTGCTGTCTGAGTCCACTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS-3UTR GCA 90 bp CATCAGTGGACTCAGACAGCACCAGTACAGGGTCTCTGTTCCCGGGACAGACTGCTGGAAATCCAGGCCTaGTGGCTGGCTGCTCACGAA +
Preference number: 4 (lower is better)
Translates to: HQWTQTAPVQGLCSRDRLLEIQA*WLAAHE
Trigger: TTCGTGAGCAGCCAGCCAGCAGGCCTGGATTTCCAG...CAGTCTGTCCCGGGAACAGAGACCCTGTACTGGTGCTGTCTGAGTCCACTGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS-3UTR TCA 90 bp TCAGTGGACTCAGACAGCACCAGTACAGGGTCTCTGTTCCCGGGACAGACTGACAAGGGGAGACATCCATaGAGCGCTGAGCATCCACTG +
Preference number: 4 (lower is better)
Translates to: SVDSDSTSTGSLFPGQTDKGRHP*SAEHPL
Trigger: CAGTGGATGCTCAGCGCTTCATGGATGTCTCCCCTT...GTCAGTCTGTCCCGGGAACAGAGACCCTGTACTGGTGCTGTCTGAGTCCACTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS-3UTR TCA 90 bp CATCAGTGGACTCAGACAGCACCAGTACAGGGTCTCTGTTCCCGGGACAGACTGAAGGGGAGACATCCATaGAGCGCTGAGCATCCACTG +
Preference number: 4 (lower is better)
Translates to: HQWTQTAPVQGLCSRDRLKGRHP*SAEHPL
Trigger: CAGTGGATGCTCAGCGCTTCATGGATGTCTCCCCTT...CAGTCTGTCCCGGGAACAGAGACCCTGTACTGGTGCTGTCTGAGTCCACTGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS-3UTR TCA 90 bp CATCAGTGGACTCAGACAGCACCAGTACAGGGTCTCTGTTCCCGGGACAGACTGTCCCCACCCTGCACATaGACAGTCACGTTCTTCAGC +
Preference number: 4 (lower is better)
Translates to: HQWTQTAPVQGLCSRDRLSPPCT*TVTFFS
Trigger: GCTGAAGAACGTGACTGTTCATGTGCAGGGTGGGGA...CAGTCTGTCCCGGGAACAGAGACCCTGTACTGGTGCTGTCTGAGTCCACTGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS-3UTR CCA 90 bp TCAGTGGACTCAGACAGCACCAGTACAGGGTCTCTGTTCCCGGGACAGACTGACGCCAGCAAGGAGTTCTaGAAACAGGGTGTGAGGTCC +
Preference number: 4 (lower is better)
Translates to: SVDSDSTSTGSLFPGQTDASKEF*KQGVRS
Trigger: GGACCTCACACCCTGTTTCCAGAACTCCTTGCTGGC...GTCAGTCTGTCCCGGGAACAGAGACCCTGTACTGGTGCTGTCTGAGTCCACTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS-3UTR CCA 90 bp TCATGGTGGACTAGACCAGGAGACCCAGGCACTGGTCAGAGCGTGGCTTTGAACCGAAGCCGCTCGTACTaGATTAGCAAAGTGGCCAGC +
Preference number: 4 (lower is better)
Translates to: SWWTRPGDPGTGQSVALNRSRSY*ISKVAS
Trigger: GCTGGCCACTTTGCTAATCCAGTACGAGCGGCTTCG...GTTCAAAGCCACGCTCTGACCAGTGCCTGGGTCTCCTGGTCTAGTCCACCATGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS-3UTR CCA 90 bp CATCAGTGGACTCAGACAGCACCAGTACAGGGTCTCTGTTCCCGGGACAGACTGCGAAGCCGCTCGTACTaGATTAGCAAAGTGGCCAGC +
Preference number: 4 (lower is better)
Translates to: HQWTQTAPVQGLCSRDRLRSRSY*ISKVAS
Trigger: GCTGGCCACTTTGCTAATCCAGTACGAGCGGCTTCG...CAGTCTGTCCCGGGAACAGAGACCCTGTACTGGTGCTGTCTGAGTCCACTGATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS-3UTR CCA 90 bp TCAGTGGACTCAGACAGCACCAGTACAGGGTCTCTGTTCCCGGGACAGACTGACGAAAGGAAGGCTGCTTaGACTTGGGTCGGGGCTTCA +
Preference number: 4 (lower is better)
Translates to: SVDSDSTSTGSLFPGQTDERKAA*TWVGAS
Trigger: TGAAGCCCCGACCCAAGTCCAAGCAGCCTTCCTTTC...GTCAGTCTGTCCCGGGAACAGAGACCCTGTACTGGTGCTGTCTGAGTCCACTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS-3UTR CCA 90 bp TACAGCTTTATTTCATCAGTGGACTCAGACAGCACCAGTACAGGGTCTCTGTTCGTGGGCGGCAGGTCCTaGGCCCAGGTGAAGGTGCCG +
Preference number: 4 (lower is better)
Translates to: YSFISSVDSDSTSTGSLFVGGRS*AQVKVP
Trigger: CGGCACCTTCACCTGGGCCCAGGACCTGCCGCCCAC...GAACAGAGACCCTGTACTGGTGCTGTCTGAGTCCACTGATGAAATAAAGCTGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS-3UTR CCA 90 bp TCATGGTGGACTAGACCAGGAGACCCAGGCACTGGTCAGAGCGTGGCTTTGAACCCTGTTGGTAGCGCTTaGGGTTCATGGGTTGGCCAA +
Preference number: 4 (lower is better)
Translates to: SWWTRPGDPGTGQSVALNPVGSA*GSWVGQ
Trigger: TTGGCCAACCCATGAACCCCAAGCGCTACCAACAGG...GTTCAAAGCCACGCTCTGACCAGTGCCTGGGTCTCCTGGTCTAGTCCACCATGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS-3UTR CCA 90 bp TCATGGTGGACTAGACCAGGAGACCCAGGCACTGGTCAGAGCGTGGCTTTGAACGGCATAGTCCGGTTCTaGACCTCCCCTTCAGAAGAC +
Preference number: 4 (lower is better)
Translates to: SWWTRPGDPGTGQSVALNGIVRF*TSPSED
Trigger: GTCTTCTGAAGGGGAGGTCCAGAACCGGACTATGCC...GTTCAAAGCCACGCTCTGACCAGTGCCTGGGTCTCCTGGTCTAGTCCACCATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS-3UTR TCA 90 bp CAGCTTTATTTCATCAGTGGACTCAGACAGCACCAGTACAGGGTCTCTGTTCCCTGGCCAGCAGCATGGTaGTCCCCACCACCAAGGGTG +
Preference number: 4 (lower is better)
Translates to: QLYFISGLRQHQYRVSVPWPAAW*SPPPRV
Trigger: CACCCTTGGTGGTGGGGATCACCATGCTGCTGGCCA...GGGAACAGAGACCCTGTACTGGTGCTGTCTGAGTCCACTGATGAAATAAAGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS-3UTR TCA 90 bp CATCAGTGGACTCAGACAGCACCAGTACAGGGTCTCTGTTCCCGGGACAGACTGTGGAACGGAAGGGGATaGTGGCACAGATCACACACA +
Preference number: 4 (lower is better)
Translates to: HQWTQTAPVQGLCSRDRLWNGRG*WHRSHT
Trigger: TGTGTGTGATCTGTGCCATCATCCCCTTCCGTTCCA...CAGTCTGTCCCGGGAACAGAGACCCTGTACTGGTGCTGTCTGAGTCCACTGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS-3UTR TCA 90 bp TCAGTGGACTCAGACAGCACCAGTACAGGGTCTCTGTTCCCGGGACAGACTGACGCGCTGAGCATCCACTaGCATGAGGTTGACCATTTC +
Preference number: 4 (lower is better)
Translates to: SVDSDSTSTGSLFPGQTDALSIH*HEVDHF
Trigger: GAAATGGTCAACCTCATGTCAGTGGATGCTCAGCGC...GTCAGTCTGTCCCGGGAACAGAGACCCTGTACTGGTGCTGTCTGAGTCCACTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS-3UTR TCA 90 bp TCATGGTGGACTAGACCAGGAGACCCAGGCACTGGTCAGAGCGTGGCTTTGAACACATCCATGAAGCGCTaGGCATCCACTGACATGAGG +
Preference number: 4 (lower is better)
Translates to: SWWTRPGDPGTGQSVALNTSMKR*ASTDMR
Trigger: CCTCATGTCAGTGGATGCTCAGCGCTTCATGGATGT...GTTCAAAGCCACGCTCTGACCAGTGCCTGGGTCTCCTGGTCTAGTCCACCATGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS-3UTR TCA 90 bp TCATGGTGGACTAGACCAGGAGACCCAGGCACTGGTCAGAGCGTGGCTTTGAACGAAGTTCACTCTGCCTaGTCCCTTTCACCTGCTCCA +
Preference number: 4 (lower is better)
Translates to: SWWTRPGDPGTGQSVALNEVHSA*SLSPAP
Trigger: TGGAGCAGGTGAAAGGGATCAGGCAGAGTGAACTTC...GTTCAAAGCCACGCTCTGACCAGTGCCTGGGTCTCCTGGTCTAGTCCACCATGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS-3UTR GCA 90 bp TCATGGTGGACTAGACCAGGAGACCCAGGCACTGGTCAGAGCGTGGCTTTGAACTGGTTCTGCTGCTTTTaGCATGCTTCCAGCAGCCGT +
Preference number: 4 (lower is better)
Translates to: SWWTRPGDPGTGQSVALNWFCCF*HASSSR
Trigger: ACGGCTGCTGGAAGCATGGCAAAAGCAGCAGAACCA...GTTCAAAGCCACGCTCTGACCAGTGCCTGGGTCTCCTGGTCTAGTCCACCATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS-3UTR GCA 90 bp TCATGGTGGACTAGACCAGGAGACCCAGGCACTGGTCAGAGCGTGGCTTTGAACCACCACAGCCACCAATaGCCCCTTCGGGATTTGAAT +
Preference number: 4 (lower is better)
Translates to: SWWTRPGDPGTGQSVALNHHSHQ*PLRDLN
Trigger: ATTCAAATCCCGAAGGGGGCATTGGTGGCTGTGGTG...GTTCAAAGCCACGCTCTGACCAGTGCCTGGGTCTCCTGGTCTAGTCCACCATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS-3UTR GCA 90 bp TCATGGTGGACTAGACCAGGAGACCCAGGCACTGGTCAGAGCGTGGCTTTGAACGCTAGGCATACAAGCTaGCTCTGGCCAACACTGAGA +
Preference number: 4 (lower is better)
Translates to: SWWTRPGDPGTGQSVALNARHTS*LWPTLR
Trigger: TCTCAGTGTTGGCCAGAGGCAGCTTGTATGCCTAGC...GTTCAAAGCCACGCTCTGACCAGTGCCTGGGTCTCCTGGTCTAGTCCACCATGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS-3UTR CCA 90 bp TCATGGTGGACTAGACCAGGAGACCCAGGCACTGGTCAGAGCGTGGCTTTGAACACTGTCTCCGAAAAGTaGGAGAAGATGGGTGAGCGG +
Preference number: 4 (lower is better)
Translates to: SWWTRPGDPGTGQSVALNTVSEK*EKMGER
Trigger: CCGCTCACCCATCTTCTCCCACTTTTCGGAGACAGT...GTTCAAAGCCACGCTCTGACCAGTGCCTGGGTCTCCTGGTCTAGTCCACCATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS-3UTR CCA 90 bp TATTTCATCAGTGGACTCAGACAGCACCAGTACAGGGTCTCTGTTCCCGGGACATCCAGGCCTGCTGGCTaGCTGCTCACGAACGTGTTC +
Preference number: 4 (lower is better)
Translates to: YFISGLRQHQYRVSVPGTSRPAG*LLTNVF
Trigger: GAACACGTTCGTGAGCAGCCAGCCAGCAGGCCTGGA...TGTCCCGGGAACAGAGACCCTGTACTGGTGCTGTCTGAGTCCACTGATGAAATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS-3UTR TCA 90 bp CTTTATTTCATCAGTGGACTCAGACAGCACCAGTACAGGGTCTCTGTTCCCGGGAGGCCGGTACCGCACTaGATAGTTCCGGAACTCCAC +
Preference number: 4 (lower is better)
Translates to: LYFISGLRQHQYRVSVPGRPVPH*IVPELH
Trigger: GTGGAGTTCCGGAACTATTCAGTGCGGTACCGGCCT...CCCGGGAACAGAGACCCTGTACTGGTGCTGTCTGAGTCCACTGATGAAATAAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS-3UTR GCA 90 bp CAGCTTTATTTCATCAGTGGACTCAGACAGCACCAGTACAGGGTCTCTGTTCCCATGACCAGGAGCCCTTaGAGTATCCCTAGGGCGGCG +
Preference number: 4 (lower is better)
Translates to: QLYFISGLRQHQYRVSVPMTRSP*SIPRAA
Trigger: CGCCGCCCTAGGGATACTGCAAGGGCTCCTGGTCAT...GGGAACAGAGACCCTGTACTGGTGCTGTCTGAGTCCACTGATGAAATAAAGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS-3UTR GCA 90 bp AATGTCCCCACTCATGGCCATCGAGTCCATCTGACAAGGAAGAAACCCTTGGAAGGCCTGCTGGCTGGCTaGTCACGAACGTGTTCAGGT +
Preference number: 4 (lower is better)
Translates to: NVPTHGHRVHLTRKKPLEGLLAG*SRTCSG
Trigger: ACCTGAACACGTTCGTGAGCAGCCAGCCAGCAGGCC...TTCCAAGGGTTTCTTCCTTGTCAGATGGACTCGATGGCCATGAGTGGGGACATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS-3UTR CCA 90 bp TATTTCATCAGTGGACTCAGACAGCACCAGTACAGGGTCTCTGTTCCCGGGACAGCCAGCGCTGGCCTCTaGGCAAGGATTTGTGTCAAG +
Preference number: 4 (lower is better)
Translates to: YFISGLRQHQYRVSVPGTASAGL*ARICVK
Trigger: CTTGACACAAATCCTTGCCCAGAGGCCAGCGCTGGC...TGTCCCGGGAACAGAGACCCTGTACTGGTGCTGTCTGAGTCCACTGATGAAATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS-3UTR CCA 90 bp TATTTCATCAGTGGACTCAGACAGCACCAGTACAGGGTCTCTGTTCCCGGGACACCTGCTCCAAGAAGCTaGGCTCCCAAGCGTACAGCT +
Preference number: 4 (lower is better)
Translates to: YFISGLRQHQYRVSVPGTPAPRS*APKRTA
Trigger: AGCTGTACGCTTGGGAGCCCAGCTTCTTGGAGCAGG...TGTCCCGGGAACAGAGACCCTGTACTGGTGCTGTCTGAGTCCACTGATGAAATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS-3UTR CCA 90 bp TCAGTGGACTCAGACAGCACCAGTACAGGGTCTCTGTTCCCGGGACAGACTGACCAGGGTCACCAGAAATaGGGTGCAGATCCAGATGAA +
Preference number: 4 (lower is better)
Translates to: SVDSDSTSTGSLFPGQTDQGHQK*GADPDE
Trigger: TTCATCTGGATCTGCACCCCATTTCTGGTGACCCTG...GTCAGTCTGTCCCGGGAACAGAGACCCTGTACTGGTGCTGTCTGAGTCCACTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS-3UTR CCA 90 bp CATCAGTGGACTCAGACAGCACCAGTACAGGGTCTCTGTTCCCGGGACAGACTGAGTCAATGGCAGCAGTaGCCTCGTCTAAAACCAGGA +
Preference number: 4 (lower is better)
Translates to: HQWTQTAPVQGLCSRDRLSQWQQ*PRLKPG
Trigger: TCCTGGTTTTAGACGAGGCCACTGCTGCCATTGACT...CAGTCTGTCCCGGGAACAGAGACCCTGTACTGGTGCTGTCTGAGTCCACTGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS-3UTR CCA 90 bp TCATGGTGGACTAGACCAGGAGACCCAGGCACTGGTCAGAGCGTGGCTTTGAACTGCAAGGCTGCTTCATaGTCCTCCTGGTCTTCATCT +
Preference number: 4 (lower is better)
Translates to: SWWTRPGDPGTGQSVALNCKAAS*SSWSSS
Trigger: AGATGAAGACCAGGAGGACCATGAAGCAGCCTTGCA...GTTCAAAGCCACGCTCTGACCAGTGCCTGGGTCTCCTGGTCTAGTCCACCATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000178136.8
CDS-3UTR TCA 90 bp TACAGCTTTATTTCATCAGTGGACTCAGACAGCACCAGTACAGGGTCTCTGTTCTGGCCAGCAGCATGGTaGTCCCCACCACCAAGGGTG +
Preference number: 4 (lower is better)
Translates to: YSFISSVDSDSTSTGSLFWPAAW*SPPPRV
Trigger: CACCCTTGGTGGTGGGGATCACCATGCTGCTGGCCA...GAACAGAGACCCTGTACTGGTGCTGTCTGAGTCCACTGATGAAATAAAGCTGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS-3UTR TCA 90 bp CTTTATTTCATCAGTGGACTCAGACAGCACCAGTACAGGGTCTCTGTTCCCGGGCGTTGTACCACCTTGTaGGAGCAGTCCTCCTCAGAC +
Preference number: 4 (lower is better)
Translates to: LYFISGLRQHQYRVSVPGRCTTL*EQSSSD
Trigger: GTCTGAGGAGGACTGCTCTCACAAGGTGGTACAACG...CCCGGGAACAGAGACCCTGTACTGGTGCTGTCTGAGTCCACTGATGAAATAAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS-3UTR TCA 90 bp CTTTATTTCATCAGTGGACTCAGACAGCACCAGTACAGGGTCTCTGTTCCCGGGTCTGGGGCAGGAAGCTaGTGCCATGAGTTACCAGCA +
Preference number: 4 (lower is better)
Translates to: LYFISGLRQHQYRVSVPGSGAGS*CHELPA
Trigger: TGCTGGTAACTCATGGCATCAGCTTCCTGCCCCAGA...CCCGGGAACAGAGACCCTGTACTGGTGCTGTCTGAGTCCACTGATGAAATAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS-3UTR GCA 90 bp TTAAAAACTGCAGTACAGGAATCATGGTGGACTAGACCAGGAGACCCAGGCACTGCAGTTCTGGATCCATaGCTGCTGGGGCACGTAGGC +
Preference number: 4 (lower is better)
Translates to: LKTAVQESWWTRPGDPGTAVLDP*LLGHVG
Trigger: GCCTACGTGCCCCAGCAGGCATGGATCCAGAACTGC...AGTGCCTGGGTCTCCTGGTCTAGTCCACCATGATTCCTGTACTGCAGTTTTTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS-3UTR GCA 90 bp CATCAGTGGACTCAGACAGCACCAGTACAGGGTCTCTGTTCCCGGGACAGACTGCACTCAGCTTCACATTaGCTGTCTCTGCTATCTCCT +
Preference number: 4 (lower is better)
Translates to: HQWTQTAPVQGLCSRDRLHSASH*LSLLSP
Trigger: AGGAGATAGCAGAGACAGGCAATGTGAAGCTGAGTG...CAGTCTGTCCCGGGAACAGAGACCCTGTACTGGTGCTGTCTGAGTCCACTGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS-3UTR CCA 90 bp TCATGGTGGACTAGACCAGGAGACCCAGGCACTGGTCAGAGCGTGGCTTTGAACTGGTTCAGGAAATCCTaGATCCGTTTCAGAGACACG +
Preference number: 4 (lower is better)
Translates to: SWWTRPGDPGTGQSVALNWFRKS*IRFRDT
Trigger: CGTGTCTCTGAAACGGATCCAGGATTTCCTGAACCA...GTTCAAAGCCACGCTCTGACCAGTGCCTGGGTCTCCTGGTCTAGTCCACCATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS-3UTR CCA 90 bp TCAGTGGACTCAGACAGCACCAGTACAGGGTCTCTGTTCCCGGGACAGACTGACCGTAGCCTGGGGAGATaGTCTTTCTTTCCACACATT +
Preference number: 4 (lower is better)
Translates to: SVDSDSTSTGSLFPGQTDRSLGR*SFFPHI
Trigger: AATGTGTGGAAAGAAAGACCATCTCCCCAGGCTACG...GTCAGTCTGTCCCGGGAACAGAGACCCTGTACTGGTGCTGTCTGAGTCCACTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS-3UTR CCA 90 bp CAGCTTTATTTCATCAGTGGACTCAGACAGCACCAGTACAGGGTCTCTGTTCCCCCCACAAACTCCACGTaGACCCCCAGCCATCGATTG +
Preference number: 4 (lower is better)
Translates to: QLYFISGLRQHQYRVSVPPTNST*TPSHRL
Trigger: CAATCGATGGCTGGGGGTCCACGTGGAGTTTGTGGG...GGGAACAGAGACCCTGTACTGGTGCTGTCTGAGTCCACTGATGAAATAAAGCTG
53% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS-3UTR CCA 90 bp CTACAGCTTTATTTCATCAGTGGACTCAGACAGCACCAGTACAGGGTCTCTGTTCCACCCTCAGCGCACTaGAAATCCAGGCCTGCTGGC +
Preference number: 4 (lower is better)
Translates to: LQLYFISGLRQHQYRVSVPPSAH*KSRPAG
Trigger: GCCAGCAGGCCTGGATTTCCAGTGCGCTGAGGGTGG...AACAGAGACCCTGTACTGGTGCTGTCTGAGTCCACTGATGAAATAAAGCTGTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS-3UTR TCA 90 bp CTACAGCTTTATTTCATCAGTGGACTCAGACAGCACCAGTACAGGGTCTCTGTTCATTGCTCCAGGCGCTaGGCCACACATTGGCTCCGA +
Preference number: 4 (lower is better)
Translates to: LQLYFISGLRQHQYRVSVHCSRR*ATHWLR
Trigger: TCGGAGCCAATGTGTGGCTCAGCGCCTGGAGCAATG...AACAGAGACCCTGTACTGGTGCTGTCTGAGTCCACTGATGAAATAAAGCTGTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS-3UTR TCA 90 bp TATTTCATCAGTGGACTCAGACAGCACCAGTACAGGGTCTCTGTTCCCGGGACAAGGAATTCAACAGCATaGGGATGGTGGGGGCCAGAA +
Preference number: 4 (lower is better)
Translates to: YFISGLRQHQYRVSVPGTRNSTA*GWWGPE
Trigger: TTCTGGCCCCCACCATCCTCATGCTGTTGAATTCCT...TGTCCCGGGAACAGAGACCCTGTACTGGTGCTGTCTGAGTCCACTGATGAAATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS-3UTR TCA 90 bp TTGACTACAGCTTTATTTCATCAGTGGACTCAGACAGCACCAGTACAGGGTCTCTGGATTCCAGCCGCTTaGGCTGCCGTGATGTGGCCA +
Preference number: 4 (lower is better)
Translates to: LTTALFHQWTQTAPVQGLWIPAA*AAVMWP
Trigger: TGGCCACATCACGGCAGCTCAAGCGGCTGGAATCCA...GAGACCCTGTACTGGTGCTGTCTGAGTCCACTGATGAAATAAAGCTGTAGTCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS-3UTR TCA 90 bp AATGTCCCCACTCATGGCCATCGAGTCCATCTGACAAGGAAGAAACCCTTGGAATCCCCACCCTGCACATaGACAGTCACGTTCTTCAGC +
Preference number: 4 (lower is better)
Translates to: NVPTHGHRVHLTRKKPLESPPCT*TVTFFS
Trigger: GCTGAAGAACGTGACTGTTCATGTGCAGGGTGGGGA...TTCCAAGGGTTTCTTCCTTGTCAGATGGACTCGATGGCCATGAGTGGGGACATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS-3UTR GCA 90 bp CTTTATTTCATCAGTGGACTCAGACAGCACCAGTACAGGGTCTCTGTTCCCGGGCTGCTGCTTTTGCCATaGTTCCAGCAGCCGTTGTAC +
Preference number: 4 (lower is better)
Translates to: LYFISGLRQHQYRVSVPGLLLLP*FQQPLY
Trigger: GTACAACGGCTGCTGGAAGCATGGCAAAAGCAGCAG...CCCGGGAACAGAGACCCTGTACTGGTGCTGTCTGAGTCCACTGATGAAATAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS-3UTR GCA 90 bp TATTTCATCAGTGGACTCAGACAGCACCAGTACAGGGTCTCTGTTCCCGGGACATGGTTCTGCTGCTTTTaGCATGCTTCCAGCAGCCGT +
Preference number: 4 (lower is better)
Translates to: YFISGLRQHQYRVSVPGTWFCCF*HASSSR
Trigger: ACGGCTGCTGGAAGCATGGCAAAAGCAGCAGAACCA...TGTCCCGGGAACAGAGACCCTGTACTGGTGCTGTCTGAGTCCACTGATGAAATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS-3UTR GCA 90 bp CTACAGCTTTATTTCATCAGTGGACTCAGACAGCACCAGTACAGGGTCTCTGTTGCAGTTCTGGATCCATaGCTGCTGGGGCACGTAGGC +
Preference number: 4 (lower is better)
Translates to: LQLYFISGLRQHQYRVSVAVLDP*LLGHVG
Trigger: GCCTACGTGCCCCAGCAGGCATGGATCCAGAACTGC...AACAGAGACCCTGTACTGGTGCTGTCTGAGTCCACTGATGAAATAAAGCTGTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS-3UTR GCA 90 bp TACAGCTTTATTTCATCAGTGGACTCAGACAGCACCAGTACAGGGTCTCTGTTCCAGTGCGGCCCACAATaGCTACCTTCTCCCCACCCT +
Preference number: 4 (lower is better)
Translates to: YSFISSVDSDSTSTGSLFQCGPQ*LPSPHP
Trigger: AGGGTGGGGAGAAGGTAGGCATTGTGGGCCGCACTG...GAACAGAGACCCTGTACTGGTGCTGTCTGAGTCCACTGATGAAATAAAGCTGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS-3UTR GCA 90 bp TTAAAAACTGCAGTACAGGAATCATGGTGGACTAGACCAGGAGACCCAGGCACTATTTGCCAGCCCCAGTaGGGCCCACAATGCCTACCT +
Preference number: 4 (lower is better)
Translates to: LKTAVQESWWTRPGDPGTICQPQ*GPQCLP
Trigger: AGGTAGGCATTGTGGGCCGCACTGGGGCTGGCAAAT...AGTGCCTGGGTCTCCTGGTCTAGTCCACCATGATTCCTGTACTGCAGTTTTTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS-3UTR GCA 90 bp TTAAAAACTGCAGTACAGGAATCATGGTGGACTAGACCAGGAGACCCAGGCACTCTGGAAATCCAGGCCTaGTGGCTGGCTGCTCACGAA +
Preference number: 4 (lower is better)
Translates to: LKTAVQESWWTRPGDPGTLEIQA*WLAAHE
Trigger: TTCGTGAGCAGCCAGCCAGCAGGCCTGGATTTCCAG...AGTGCCTGGGTCTCCTGGTCTAGTCCACCATGATTCCTGTACTGCAGTTTTTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS-3UTR GCA 90 bp CATCAGTGGACTCAGACAGCACCAGTACAGGGTCTCTGTTCCCGGGACAGACTGTCCTCATTTGCATTTTaGAAGGCTGCTTCATGGTCC +
Preference number: 4 (lower is better)
Translates to: HQWTQTAPVQGLCSRDRLSSFAF*KAASWS
Trigger: GGACCATGAAGCAGCCTTGCAAAATGCAAATGAGGA...CAGTCTGTCCCGGGAACAGAGACCCTGTACTGGTGCTGTCTGAGTCCACTGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000178136.8
CDS-3UTR CCA 90 bp TATTTCATCAGTGGACTCAGACAGCACCAGTACAGGGTCTCTGTTCCCGGGACATCAGCTGTTGCCGTCTaGGACCTTGATGCTTGGTTC +
Preference number: 4 (lower is better)
Translates to: YFISGLRQHQYRVSVPGTSAVAV*DLDAWF
Trigger: GAACCAAGCATCAAGGTCCCAGACGGCAACAGCTGA...TGTCCCGGGAACAGAGACCCTGTACTGGTGCTGTCTGAGTCCACTGATGAAATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS-3UTR CCA 90 bp CTTTATTTCATCAGTGGACTCAGACAGCACCAGTACAGGGTCTCTGTTCCCGGGAGAGACACGCTGGCCTaGGTCAGTCCACTGATTAAC +
Preference number: 4 (lower is better)
Translates to: LYFISGLRQHQYRVSVPGRDTLA*VSPLIN
Trigger: GTTAATCAGTGGACTGACCCAGGCCAGCGTGTCTCT...CCCGGGAACAGAGACCCTGTACTGGTGCTGTCTGAGTCCACTGATGAAATAAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS-3UTR CCA 90 bp CTTTATTTCATCAGTGGACTCAGACAGCACCAGTACAGGGTCTCTGTTCCCGGGTCTGTCAGGTCTGTGTaGGTGCTGAGTGTGTCTTCG +
Preference number: 4 (lower is better)
Translates to: LYFISGLRQHQYRVSVPGSVRSV*VLSVSS
Trigger: CGAAGACACACTCAGCACCCACACAGACCTGACAGA...CCCGGGAACAGAGACCCTGTACTGGTGCTGTCTGAGTCCACTGATGAAATAAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS-3UTR CCA 90 bp TTGACTACAGCTTTATTTCATCAGTGGACTCAGACAGCACCAGTACAGGGTCTCTCCAGGCCTGCTGGCTaGCTGCTCACGAACGTGTTC +
Preference number: 4 (lower is better)
Translates to: LTTALFHQWTQTAPVQGLSRPAG*LLTNVF
Trigger: GAACACGTTCGTGAGCAGCCAGCCAGCAGGCCTGGA...GAGACCCTGTACTGGTGCTGTCTGAGTCCACTGATGAAATAAAGCTGTAGTCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS-3UTR TCA 90 bp AATGTCCCCACTCATGGCCATCGAGTCCATCTGACAAGGAAGAAACCCTTGGAACCTGGGTCAGTCCACTaGTTAACTGAGGCAGCATGT +
Preference number: 4 (lower is better)
Translates to: NVPTHGHRVHLTRKKPLEPGSVH*LTEAAC
Trigger: ACATGCTGCCTCAGTTAATCAGTGGACTGACCCAGG...TTCCAAGGGTTTCTTCCTTGTCAGATGGACTCGATGGCCATGAGTGGGGACATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS-3UTR GCA 90 bp AATGTCCCCACTCATGGCCATCGAGTCCATCTGACAAGGAAGAAACCCTTGGAAGATCACTGCAAACAGTaGGGCAAAGAGCACCACGCA +
Preference number: 4 (lower is better)
Translates to: NVPTHGHRVHLTRKKPLEDHCKQ*GKEHHA
Trigger: TGCGTGGTGCTCTTTGCCGCACTGTTTGCAGTGATC...TTCCAAGGGTTTCTTCCTTGTCAGATGGACTCGATGGCCATGAGTGGGGACATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS-3UTR GCA 90 bp TTGACTACAGCTTTATTTCATCAGTGGACTCAGACAGCACCAGTACAGGGTCTCATTTGCCAGCCCCAGTaGGGCCCACAATGCCTACCT +
Preference number: 4 (lower is better)
Translates to: LTTALFHQWTQTAPVQGLICQPQ*GPQCLP
Trigger: AGGTAGGCATTGTGGGCCGCACTGGGGCTGGCAAAT...GAGACCCTGTACTGGTGCTGTCTGAGTCCACTGATGAAATAAAGCTGTAGTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS-3UTR CCA 90 bp TTAAAAACTGCAGTACAGGAATCATGGTGGACTAGACCAGGAGACCCAGGCACTAAGGCTGCTTGGACTTaGGTCGGGGCTTCAGTAGGA +
Preference number: 4 (lower is better)
Translates to: LKTAVQESWWTRPGDPGTKAAWT*VGASVG
Trigger: TCCTACTGAAGCCCCGACCCAAGTCCAAGCAGCCTT...AGTGCCTGGGTCTCCTGGTCTAGTCCACCATGATTCCTGTACTGCAGTTTTTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS-3UTR CCA 90 bp TTAAAAACTGCAGTACAGGAATCATGGTGGACTAGACCAGGAGACCCAGGCACTGAAAGGAAGGCTGCTTaGACTTGGGTCGGGGCTTCA +
Preference number: 4 (lower is better)
Translates to: LKTAVQESWWTRPGDPGTERKAA*TWVGAS
Trigger: TGAAGCCCCGACCCAAGTCCAAGCAGCCTTCCTTTC...AGTGCCTGGGTCTCCTGGTCTAGTCCACCATGATTCCTGTACTGCAGTTTTTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS-3UTR CCA 90 bp CTACAGCTTTATTTCATCAGTGGACTCAGACAGCACCAGTACAGGGTCTCTGTTCCTGCTCCAAGAAGCTaGGCTCCCAAGCGTACAGCT +
Preference number: 4 (lower is better)
Translates to: LQLYFISGLRQHQYRVSVPAPRS*APKRTA
Trigger: AGCTGTACGCTTGGGAGCCCAGCTTCTTGGAGCAGG...AACAGAGACCCTGTACTGGTGCTGTCTGAGTCCACTGATGAAATAAAGCTGTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS-3UTR CCA 90 bp CAGCTTTATTTCATCAGTGGACTCAGACAGCACCAGTACAGGGTCTCTGTTCCCGGTGATGGCGTAGCCTaGGGAGATGGTCTTTCTTTC +
Preference number: 4 (lower is better)
Translates to: QLYFISGLRQHQYRVSVPGDGVA*GDGLSF
Trigger: GAAAGAAAGACCATCTCCCCAGGCTACGCCATCACC...GGGAACAGAGACCCTGTACTGGTGCTGTCTGAGTCCACTGATGAAATAAAGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS-3UTR CCA 90 bp TTAAAAACTGCAGTACAGGAATCATGGTGGACTAGACCAGGAGACCCAGGCACTCCTGTTGGTAGCGCTTaGGGTTCATGGGTTGGCCAA +
Preference number: 4 (lower is better)
Translates to: LKTAVQESWWTRPGDPGTPVGSA*GSWVGQ
Trigger: TTGGCCAACCCATGAACCCCAAGCGCTACCAACAGG...AGTGCCTGGGTCTCCTGGTCTAGTCCACCATGATTCCTGTACTGCAGTTTTTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS-3UTR CCA 90 bp CAGCTTTATTTCATCAGTGGACTCAGACAGCACCAGTACAGGGTCTCTGTTCCCGACCTCGTAGATGGCTaGCTCATTGTCTGTCAGGTC +
Preference number: 4 (lower is better)
Translates to: QLYFISGLRQHQYRVSVPDLVDG*LIVCQV
Trigger: GACCTGACAGACAATGAGCCAGCCATCTACGAGGTC...GGGAACAGAGACCCTGTACTGGTGCTGTCTGAGTCCACTGATGAAATAAAGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS-3UTR CCA 90 bp CTACAGCTTTATTTCATCAGTGGACTCAGACAGCACCAGTACAGGGTCTCTGTTGAAATCCAGGCCTGCTaGCTGGCTGCTCACGAACGT +
Preference number: 4 (lower is better)
Translates to: LQLYFISGLRQHQYRVSVEIQAC*LAAHER
Trigger: ACGTTCGTGAGCAGCCAGCCAGCAGGCCTGGATTTC...AACAGAGACCCTGTACTGGTGCTGTCTGAGTCCACTGATGAAATAAAGCTGTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS-3UTR CCA 90 bp TACAGCTTTATTTCATCAGTGGACTCAGACAGCACCAGTACAGGGTCTCTGTTCGAAATCCAGGCCTGCTaGCTGGCTGCTCACGAACGT +
Preference number: 4 (lower is better)
Translates to: YSFISSVDSDSTSTGSLFEIQAC*LAAHER
Trigger: ACGTTCGTGAGCAGCCAGCCAGCAGGCCTGGATTTC...GAACAGAGACCCTGTACTGGTGCTGTCTGAGTCCACTGATGAAATAAAGCTGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS-3UTR TCA 90 bp TACAGCTTTATTTCATCAGTGGACTCAGACAGCACCAGTACAGGGTCTCTGTTCCGTACACTCCGAGGGTaGTCAGGGTCACCAGAAATG +
Preference number: 4 (lower is better)
Translates to: YSFISSVDSDSTSTGSLFRTLRG*SGSPEM
Trigger: CATTTCTGGTGACCCTGATCACCCTCGGAGTGTACG...GAACAGAGACCCTGTACTGGTGCTGTCTGAGTCCACTGATGAAATAAAGCTGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS-3UTR TCA 90 bp TTAAAAACTGCAGTACAGGAATCATGGTGGACTAGACCAGGAGACCCAGGCACTATATGCTTCGCCACATaGGAGTCCACAGCCGACAGT +
Preference number: 4 (lower is better)
Translates to: LKTAVQESWWTRPGDPGTICFAT*ESTADS
Trigger: ACTGTCGGCTGTGGACTCTCATGTGGCGAAGCATAT...AGTGCCTGGGTCTCCTGGTCTAGTCCACCATGATTCCTGTACTGCAGTTTTTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS-3UTR CCA 90 bp CTACAGCTTTATTTCATCAGTGGACTCAGACAGCACCAGTACAGGGTCTCTGTTGCCAGCAAGGAGTTCTaGAAACAGGGTGTGAGGTCC +
Preference number: 4 (lower is better)
Translates to: LQLYFISGLRQHQYRVSVASKEF*KQGVRS
Trigger: GGACCTCACACCCTGTTTCCAGAACTCCTTGCTGGC...AACAGAGACCCTGTACTGGTGCTGTCTGAGTCCACTGATGAAATAAAGCTGTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS-3UTR CCA 90 bp CTTTATTTCATCAGTGGACTCAGACAGCACCAGTACAGGGTCTCTGTTCCCGGGTGGGACCTTGATGCTTaGTTCTGCTGCTTTTGCCAT +
Preference number: 4 (lower is better)
Translates to: LYFISGLRQHQYRVSVPGWDLDA*FCCFCH
Trigger: ATGGCAAAAGCAGCAGAACCAAGCATCAAGGTCCCA...CCCGGGAACAGAGACCCTGTACTGGTGCTGTCTGAGTCCACTGATGAAATAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS-3UTR CCA 90 bp TTAAAAACTGCAGTACAGGAATCATGGTGGACTAGACCAGGAGACCCAGGCACTTCAGCTGTTGCCGTCTaGGACCTTGATGCTTGGTTC +
Preference number: 4 (lower is better)
Translates to: LKTAVQESWWTRPGDPGTSAVAV*DLDAWF
Trigger: GAACCAAGCATCAAGGTCCCAGACGGCAACAGCTGA...AGTGCCTGGGTCTCCTGGTCTAGTCCACCATGATTCCTGTACTGCAGTTTTTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS-3UTR CCA 90 bp TTGACTACAGCTTTATTTCATCAGTGGACTCAGACAGCACCAGTACAGGGTCTCAAGGCTGCTTGGACTTaGGTCGGGGCTTCAGTAGGA +
Preference number: 4 (lower is better)
Translates to: LTTALFHQWTQTAPVQGLKAAWT*VGASVG
Trigger: TCCTACTGAAGCCCCGACCCAAGTCCAAGCAGCCTT...GAGACCCTGTACTGGTGCTGTCTGAGTCCACTGATGAAATAAAGCTGTAGTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS-3UTR CCA 90 bp CTTTATTTCATCAGTGGACTCAGACAGCACCAGTACAGGGTCTCTGTTCCCGGGTGGTTCAGGAAATCCTaGATCCGTTTCAGAGACACG +
Preference number: 4 (lower is better)
Translates to: LYFISGLRQHQYRVSVPGWFRKS*IRFRDT
Trigger: CGTGTCTCTGAAACGGATCCAGGATTTCCTGAACCA...CCCGGGAACAGAGACCCTGTACTGGTGCTGTCTGAGTCCACTGATGAAATAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS-3UTR CCA 90 bp TTAAAAACTGCAGTACAGGAATCATGGTGGACTAGACCAGGAGACCCAGGCACTGGTGATGGCGTAGCCTaGGGAGATGGTCTTTCTTTC +
Preference number: 4 (lower is better)
Translates to: LKTAVQESWWTRPGDPGTGDGVA*GDGLSF
Trigger: GAAAGAAAGACCATCTCCCCAGGCTACGCCATCACC...AGTGCCTGGGTCTCCTGGTCTAGTCCACCATGATTCCTGTACTGCAGTTTTTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS-3UTR CCA 90 bp CTACAGCTTTATTTCATCAGTGGACTCAGACAGCACCAGTACAGGGTCTCTGTTGGCATAGTCCGGTTCTaGACCTCCCCTTCAGAAGAC +
Preference number: 4 (lower is better)
Translates to: LQLYFISGLRQHQYRVSVGIVRF*TSPSED
Trigger: GTCTTCTGAAGGGGAGGTCCAGAACCGGACTATGCC...AACAGAGACCCTGTACTGGTGCTGTCTGAGTCCACTGATGAAATAAAGCTGTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS-3UTR TCA 90 bp ATTGGAAAATATGCATATGTAGAGGCAGGAGCAAGGTCTCTTAAAAACTGCAGTGACAGGAGCAGGGGATaGGCCATGGATCAGGCCGTG +
Preference number: 4 (lower is better)
Translates to: IGKYAYVEAGARSLKNCSDRSRG*AMDQAV
Trigger: CACGGCCTGATCCATGGCTCATCCCCTGCTCCTGTC...ACTGCAGTTTTTAAGAGACCTTGCTCCTGCCTCTACATATGCATATTTTCCAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS-3UTR TCA 90 bp TTGACTACAGCTTTATTTCATCAGTGGACTCAGACAGCACCAGTACAGGGTCTCACCCTCTGCCAAAGCTaGGAGGATCTTGGAACGGAA +
Preference number: 4 (lower is better)
Translates to: LTTALFHQWTQTAPVQGLTLCQS*EDLGTE
Trigger: TTCCGTTCCAAGATCCTCTCAGCTTTGGCAGAGGGT...GAGACCCTGTACTGGTGCTGTCTGAGTCCACTGATGAAATAAAGCTGTAGTCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS-3UTR TCA 90 bp CTACAGCTTTATTTCATCAGTGGACTCAGACAGCACCAGTACAGGGTCTCTGTTACATCCATGAAGCGCTaGGCATCCACTGACATGAGG +
Preference number: 4 (lower is better)
Translates to: LQLYFISGLRQHQYRVSVTSMKR*ASTDMR
Trigger: CCTCATGTCAGTGGATGCTCAGCGCTTCATGGATGT...AACAGAGACCCTGTACTGGTGCTGTCTGAGTCCACTGATGAAATAAAGCTGTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS-3UTR TCA 90 bp TTGACTACAGCTTTATTTCATCAGTGGACTCAGACAGCACCAGTACAGGGTCTCGAAGTTCACTCTGCCTaGTCCCTTTCACCTGCTCCA +
Preference number: 4 (lower is better)
Translates to: LTTALFHQWTQTAPVQGLEVHSA*SLSPAP
Trigger: TGGAGCAGGTGAAAGGGATCAGGCAGAGTGAACTTC...GAGACCCTGTACTGGTGCTGTCTGAGTCCACTGATGAAATAAAGCTGTAGTCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS-3UTR TCA 90 bp TACAGCTTTATTTCATCAGTGGACTCAGACAGCACCAGTACAGGGTCTCTGTTCCCTGGGTCAGTCCACTaGTTAACTGAGGCAGCATGT +
Preference number: 4 (lower is better)
Translates to: YSFISSVDSDSTSTGSLFPGSVH*LTEAAC
Trigger: ACATGCTGCCTCAGTTAATCAGTGGACTGACCCAGG...GAACAGAGACCCTGTACTGGTGCTGTCTGAGTCCACTGATGAAATAAAGCTGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS-3UTR TCA 90 bp CTACAGCTTTATTTCATCAGTGGACTCAGACAGCACCAGTACAGGGTCTCTGTTATATGCTTCGCCACATaGGAGTCCACAGCCGACAGT +
Preference number: 4 (lower is better)
Translates to: LQLYFISGLRQHQYRVSVICFAT*ESTADS
Trigger: ACTGTCGGCTGTGGACTCTCATGTGGCGAAGCATAT...AACAGAGACCCTGTACTGGTGCTGTCTGAGTCCACTGATGAAATAAAGCTGTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS-3UTR TCA 90 bp AATGTCCCCACTCATGGCCATCGAGTCCATCTGACAAGGAAGAAACCCTTGGAAGTGTCAAAGAAGGACTaGGGGGAACGAATCTTGTTG +
Preference number: 4 (lower is better)
Translates to: NVPTHGHRVHLTRKKPLEVSKKD*GERILL
Trigger: CAACAAGATTCGTTCCCCTCAGTCCTTCTTTGACAC...TTCCAAGGGTTTCTTCCTTGTCAGATGGACTCGATGGCCATGAGTGGGGACATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS-3UTR GCA 90 bp AATGTCCCCACTCATGGCCATCGAGTCCATCTGACAAGGAAGAAACCCTTGGAAGATGACCTGCAAAGGTaGAGACCACAGCAGATTGAT +
Preference number: 4 (lower is better)
Translates to: NVPTHGHRVHLTRKKPLEDDLQR*RPQQID
Trigger: ATCAATCTGCTGTGGTCTGCACCTTTGCAGGTCATC...TTCCAAGGGTTTCTTCCTTGTCAGATGGACTCGATGGCCATGAGTGGGGACATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS-3UTR GCA 90 bp CTACAGCTTTATTTCATCAGTGGACTCAGACAGCACCAGTACAGGGTCTCTGTTCACCACAGCCACCAATaGCCCCTTCGGGATTTGAAT +
Preference number: 4 (lower is better)
Translates to: LQLYFISGLRQHQYRVSVHHSHQ*PLRDLN
Trigger: ATTCAAATCCCGAAGGGGGCATTGGTGGCTGTGGTG...AACAGAGACCCTGTACTGGTGCTGTCTGAGTCCACTGATGAAATAAAGCTGTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS-3UTR GCA 90 bp CTTTATTTCATCAGTGGACTCAGACAGCACCAGTACAGGGTCTCTGTTCCCGGGCATTTTCCTGAAGTGTaGAGTTCTGGATCCATGCCT +
Preference number: 4 (lower is better)
Translates to: LYFISGLRQHQYRVSVPGHFPEV*SSGSMP
Trigger: AGGCATGGATCCAGAACTGCACACTTCAGGAAAATG...CCCGGGAACAGAGACCCTGTACTGGTGCTGTCTGAGTCCACTGATGAAATAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS-3UTR GCA 90 bp CTTTATTTCATCAGTGGACTCAGACAGCACCAGTACAGGGTCTCTGTTCCCGGGTCCTCATTTGCATTTTaGAAGGCTTCATGGTCCTCC +
Preference number: 4 (lower is better)
Translates to: LYFISGLRQHQYRVSVPGSSFAF*KASWSS
Trigger: GGAGGACCATGAAGCCTTGCAAAATGCAAATGAGGA...CCCGGGAACAGAGACCCTGTACTGGTGCTGTCTGAGTCCACTGATGAAATAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021231.8
CDS-3UTR GCA 90 bp CTACAGCTTTATTTCATCAGTGGACTCAGACAGCACCAGTACAGGGTCTCTGTTGATCACTGCAAACAGTaGGGCAAAGAGCACCACGCA +
Preference number: 4 (lower is better)
Translates to: LQLYFISGLRQHQYRVSVDHCKQ*GKEHHA
Trigger: TGCGTGGTGCTCTTTGCCGCACTGTTTGCAGTGATC...AACAGAGACCCTGTACTGGTGCTGTCTGAGTCCACTGATGAAATAAAGCTGTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS-3UTR GCA 90 bp CTACAGCTTTATTTCATCAGTGGACTCAGACAGCACCAGTACAGGGTCTCTGTTGCTAGGCATACAAGCTaGCTCTGGCCAACACTGAGA +
Preference number: 4 (lower is better)
Translates to: LQLYFISGLRQHQYRVSVARHTS*LWPTLR
Trigger: TCTCAGTGTTGGCCAGAGGCAGCTTGTATGCCTAGC...AACAGAGACCCTGTACTGGTGCTGTCTGAGTCCACTGATGAAATAAAGCTGTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS-3UTR CCA 90 bp CTTTATTTCATCAGTGGACTCAGACAGCACCAGTACAGGGTCTCTGTTCCCGGGCACAGCTCCATTGAGTaGTATCAGCAAGACTATCAC +
Preference number: 4 (lower is better)
Translates to: LYFISGLRQHQYRVSVPGHSSIE*YQQDYH
Trigger: GTGATAGTCTTGCTGATACCACTCAATGGAGCTGTG...CCCGGGAACAGAGACCCTGTACTGGTGCTGTCTGAGTCCACTGATGAAATAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS-3UTR CCA 90 bp TATTTCATCAGTGGACTCAGACAGCACCAGTACAGGGTCTCTGTTCCCGGGACACACAGCTCCATTGAGTaGTATCAGCAAGACTATCAC +
Preference number: 4 (lower is better)
Translates to: YFISGLRQHQYRVSVPGTHSSIE*YQQDYH
Trigger: GTGATAGTCTTGCTGATACCACTCAATGGAGCTGTG...TGTCCCGGGAACAGAGACCCTGTACTGGTGCTGTCTGAGTCCACTGATGAAATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS-3UTR CCA 90 bp TATTTCATCAGTGGACTCAGACAGCACCAGTACAGGGTCTCTGTTCCCGGGACATTGGGGTTCATGGGTTaGCCAAATAGCACATTTTCC +
Preference number: 4 (lower is better)
Translates to: YFISGLRQHQYRVSVPGTLGFMG*PNSTFS
Trigger: GGAAAATGTGCTATTTGGCCAACCCATGAACCCCAA...TGTCCCGGGAACAGAGACCCTGTACTGGTGCTGTCTGAGTCCACTGATGAAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS-3UTR CCA 90 bp TTGACTACAGCTTTATTTCATCAGTGGACTCAGACAGCACCAGTACAGGGTCTCTCTGTCAGGTCTGTGTaGGTGCTGAGTGTGTCTTCG +
Preference number: 4 (lower is better)
Translates to: LTTALFHQWTQTAPVQGLSVRSV*VLSVSS
Trigger: CGAAGACACACTCAGCACCCACACAGACCTGACAGA...GAGACCCTGTACTGGTGCTGTCTGAGTCCACTGATGAAATAAAGCTGTAGTCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS-3UTR CCA 90 bp TTGACTACAGCTTTATTTCATCAGTGGACTCAGACAGCACCAGTACAGGGTCTCGACCTCGTAGATGGCTaGCTCATTGTCTGTCAGGTC +
Preference number: 4 (lower is better)
Translates to: LTTALFHQWTQTAPVQGLDLVDG*LIVCQV
Trigger: GACCTGACAGACAATGAGCCAGCCATCTACGAGGTC...GAGACCCTGTACTGGTGCTGTCTGAGTCCACTGATGAAATAAAGCTGTAGTCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS-3UTR CCA 90 bp TTGACTACAGCTTTATTTCATCAGTGGACTCAGACAGCACCAGTACAGGGTCTCGAGGTCTTGTTCTGCTaGCCATGTTCCTCCGCATCA +
Preference number: 4 (lower is better)
Translates to: LTTALFHQWTQTAPVQGLEVLFC*PCSSAS
Trigger: TGATGCGGAGGAACATGGCCAGCAGAACAAGACCTC...GAGACCCTGTACTGGTGCTGTCTGAGTCCACTGATGAAATAAAGCTGTAGTCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS-3UTR CCA 90 bp GGAAAATATGCATATGTAGAGGCAGGAGCAAGGTCTCTTAAAAACTGCAGTACATGCGGCCCGAGGGCGTaGTGTCAAAGAAGGACTGAG +
Preference number: 4 (lower is better)
Translates to: GKYAYVEAGARSLKNCSTCGPRA*CQRRTE
Trigger: CTCAGTCCTTCTTTGACACCACGCCCTCGGGCCGCA...TGTACTGCAGTTTTTAAGAGACCTTGCTCCTGCCTCTACATATGCATATTTTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS-3UTR CCA 90 bp TTAAAAACTGCAGTACAGGAATCATGGTGGACTAGACCAGGAGACCCAGGCACTACAGGCAAAGAGTCATaGAAGATTTGCCAGCCCCAG +
Preference number: 4 (lower is better)
Translates to: LKTAVQESWWTRPGDPGTTGKES*KICQPQ
Trigger: CTGGGGCTGGCAAATCTTCCATGACTCTTTGCCTGT...AGTGCCTGGGTCTCCTGGTCTAGTCCACCATGATTCCTGTACTGCAGTTTTTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS-3UTR CCA 90 bp TTGACTACAGCTTTATTTCATCAGTGGACTCAGACAGCACCAGTACAGGGTCTCCAAGTCCCGCATCCTTaGCCATCCCATAGAAGATGC +
Preference number: 4 (lower is better)
Translates to: LTTALFHQWTQTAPVQGLQVPHP*PSHRRC
Trigger: GCATCTTCTATGGGATGGCCAAGGATGCGGGACTTG...GAGACCCTGTACTGGTGCTGTCTGAGTCCACTGATGAAATAAAGCTGTAGTCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS-3UTR TCA 90 bp TATTTCATCAGTGGACTCAGACAGCACCAGTACAGGGTCTCTGTTCCCGGGACAAATAGCACATTTTCCTaGAGTGTGCAGTTCTGGATC +
Preference number: 4 (lower is better)
Translates to: YFISGLRQHQYRVSVPGTNSTFS*SVQFWI
Trigger: GATCCAGAACTGCACACTTCAGGAAAATGTGCTATT...TGTCCCGGGAACAGAGACCCTGTACTGGTGCTGTCTGAGTCCACTGATGAAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS-3UTR GCA 90 bp TTGACTACAGCTTTATTTCATCAGTGGACTCAGACAGCACCAGTACAGGGTCTCGATGCTTGGTTCTGCTaGTTTTGCCATGCTTCCAGC +
Preference number: 4 (lower is better)
Translates to: LTTALFHQWTQTAPVQGLDAWFC*FCHASS
Trigger: GCTGGAAGCATGGCAAAAGCAGCAGAACCAAGCATC...GAGACCCTGTACTGGTGCTGTCTGAGTCCACTGATGAAATAAAGCTGTAGTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS-3UTR GCA 90 bp ATTGGAAAATATGCATATGTAGAGGCAGGAGCAAGGTCTCTTAAAAACTGCAGTGGCCTGCTGGCTGGCTaGTCACGAACGTGTTCAGGT +
Preference number: 4 (lower is better)
Translates to: IGKYAYVEAGARSLKNCSGLLAG*SRTCSG
Trigger: ACCTGAACACGTTCGTGAGCAGCCAGCCAGCAGGCC...ACTGCAGTTTTTAAGAGACCTTGCTCCTGCCTCTACATATGCATATTTTCCAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS-3UTR CCA 90 bp TTGACTACAGCTTTATTTCATCAGTGGACTCAGACAGCACCAGTACAGGGTCTCAGCGCTTGGGGTTCATaGGTTGGCCAAATAGCACAT +
Preference number: 4 (lower is better)
Translates to: LTTALFHQWTQTAPVQGLSAWGS*VGQIAH
Trigger: ATGTGCTATTTGGCCAACCCATGAACCCCAAGCGCT...GAGACCCTGTACTGGTGCTGTCTGAGTCCACTGATGAAATAAAGCTGTAGTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS-3UTR CCA 90 bp CTACAGCTTTATTTCATCAGTGGACTCAGACAGCACCAGTACAGGGTCTCTGTTATGATAAAGTCCGTCTaGGGCAGGAAGCTGATGCCA +
Preference number: 4 (lower is better)
Translates to: LQLYFISGLRQHQYRVSVMIKSV*GRKLMP
Trigger: TGGCATCAGCTTCCTGCCCCAGACGGACTTTATCAT...AACAGAGACCCTGTACTGGTGCTGTCTGAGTCCACTGATGAAATAAAGCTGTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS-3UTR CCA 90 bp CTACAGCTTTATTTCATCAGTGGACTCAGACAGCACCAGTACAGGGTCTCTGTTAGTCAATGGCAGCAGTaGCCTCGTCTAAAACCAGGA +
Preference number: 4 (lower is better)
Translates to: LQLYFISGLRQHQYRVSVSQWQQ*PRLKPG
Trigger: TCCTGGTTTTAGACGAGGCCACTGCTGCCATTGACT...AACAGAGACCCTGTACTGGTGCTGTCTGAGTCCACTGATGAAATAAAGCTGTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS-3UTR TCA 90 bp GGAAAATATGCATATGTAGAGGCAGGAGCAAGGTCTCTTAAAAACTGCAGTACACGTTGTACCACCTTGTaGGAGCAGTCCTCCTCAGAC +
Preference number: 4 (lower is better)
Translates to: GKYAYVEAGARSLKNCSTRCTTL*EQSSSD
Trigger: GTCTGAGGAGGACTGCTCTCACAAGGTGGTACAACG...TGTACTGCAGTTTTTAAGAGACCTTGCTCCTGCCTCTACATATGCATATTTTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS-3UTR TCA 90 bp GGAAAATATGCATATGTAGAGGCAGGAGCAAGGTCTCTTAAAAACTGCAGTACACGTACACTCCGAGGGTaGTCAGGGTCACCAGAAATG +
Preference number: 4 (lower is better)
Translates to: GKYAYVEAGARSLKNCSTRTLRG*SGSPEM
Trigger: CATTTCTGGTGACCCTGATCACCCTCGGAGTGTACG...TGTACTGCAGTTTTTAAGAGACCTTGCTCCTGCCTCTACATATGCATATTTTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS-3UTR TCA 90 bp TTGACTACAGCTTTATTTCATCAGTGGACTCAGACAGCACCAGTACAGGGTCTCCGCCTCCTTCTCCAATaGATTTGTGTGTTTCTTGGG +
Preference number: 4 (lower is better)
Translates to: LTTALFHQWTQTAPVQGLRLLLQ*ICVFLG
Trigger: CCCAAGAAACACACAAATTCATTGGAGAAGGAGGCG...GAGACCCTGTACTGGTGCTGTCTGAGTCCACTGATGAAATAAAGCTGTAGTCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS-3UTR TCA 90 bp TTAAAAACTGCAGTACAGGAATCATGGTGGACTAGACCAGGAGACCCAGGCACTTGGTGGAGATGGATGTaGAGAAGGAATTCAACAGCA +
Preference number: 4 (lower is better)
Translates to: LKTAVQESWWTRPGDPGTWWRWM*RRNSTA
Trigger: TGCTGTTGAATTCCTTCTTCACATCCATCTCCACCA...AGTGCCTGGGTCTCCTGGTCTAGTCCACCATGATTCCTGTACTGCAGTTTTTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS-3UTR GCA 90 bp TACAGCTTTATTTCATCAGTGGACTCAGACAGCACCAGTACAGGGTCTCTGTTCCTTGATGCTTGGTTCTaGTGCTTTTGCCATGCTTCC +
Preference number: 4 (lower is better)
Translates to: YSFISSVDSDSTSTGSLFLDAWF*CFCHAS
Trigger: GGAAGCATGGCAAAAGCAGCAGAACCAAGCATCAAG...GAACAGAGACCCTGTACTGGTGCTGTCTGAGTCCACTGATGAAATAAAGCTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS-3UTR GCA 90 bp TTGACTACAGCTTTATTTCATCAGTGGACTCAGACAGCACCAGTACAGGGTCTCCTTGATGCTTGGTTCTaGTGCTTTTGCCATGCTTCC +
Preference number: 4 (lower is better)
Translates to: LTTALFHQWTQTAPVQGLLDAWF*CFCHAS
Trigger: GGAAGCATGGCAAAAGCAGCAGAACCAAGCATCAAG...GAGACCCTGTACTGGTGCTGTCTGAGTCCACTGATGAAATAAAGCTGTAGTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS-3UTR GCA 90 bp TTGACTACAGCTTTATTTCATCAGTGGACTCAGACAGCACCAGTACAGGGTCTCGATGACCTGCAAAGGTaGAGACCACAGCAGATTGAT +
Preference number: 4 (lower is better)
Translates to: LTTALFHQWTQTAPVQGLDDLQR*RPQQID
Trigger: ATCAATCTGCTGTGGTCTGCACCTTTGCAGGTCATC...GAGACCCTGTACTGGTGCTGTCTGAGTCCACTGATGAAATAAAGCTGTAGTCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS-3UTR GCA 90 bp TTAAAAACTGCAGTACAGGAATCATGGTGGACTAGACCAGGAGACCCAGGCACTCATTTTCCTGAAGTGTaGAGTTCTGGATCCATGCCT +
Preference number: 4 (lower is better)
Translates to: LKTAVQESWWTRPGDPGTHFPEV*SSGSMP
Trigger: AGGCATGGATCCAGAACTGCACACTTCAGGAAAATG...AGTGCCTGGGTCTCCTGGTCTAGTCCACCATGATTCCTGTACTGCAGTTTTTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS-3UTR CCA 90 bp CTACAGCTTTATTTCATCAGTGGACTCAGACAGCACCAGTACAGGGTCTCTGTTCGTAGCCTGGGGAGATaGTCTTTCTTTCCACACATT +
Preference number: 4 (lower is better)
Translates to: LQLYFISGLRQHQYRVSVRSLGR*SFFPHI
Trigger: AATGTGTGGAAAGAAAGACCATCTCCCCAGGCTACG...AACAGAGACCCTGTACTGGTGCTGTCTGAGTCCACTGATGAAATAAAGCTGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS-3UTR CCA 90 bp GTGATCTCTAACTCATTTCCTCATTCCACTGTGAGACAATTTGCAGAATTAAAACCACCCTCAGCGCACTaGAAATCCAGGCCTGCTGGC +
Preference number: 4 (lower is better)
Translates to: VISNSFPHSTVRQFAELKPPSAH*KSRPAG
Trigger: GCCAGCAGGCCTGGATTTCCAGTGCGCTGAGGGTGG...TTTTAATTCTGCAAATTGTCTCACAGTGGAATGAGGAAATGAGTTAGAGATCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS-3UTR CCA 90 bp AATGTCCCCACTCATGGCCATCGAGTCCATCTGACAAGGAAGAAACCCTTGGAACGCAATGAGGTTGACTaGAGAATCAAATTCAGCTAC +
Preference number: 4 (lower is better)
Translates to: NVPTHGHRVHLTRKKPLERNEVD*RIKFSY
Trigger: GTAGCTGAATTTGATTCTCCAGTCAACCTCATTGCG...TTCCAAGGGTTTCTTCCTTGTCAGATGGACTCGATGGCCATGAGTGGGGACATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS-3UTR TCA 90 bp GGAAAATATGCATATGTAGAGGCAGGAGCAAGGTCTCTTAAAAACTGCAGTACAGCGCTGAGCATCCACTaGCATGAGGTTGACCATTTC +
Preference number: 4 (lower is better)
Translates to: GKYAYVEAGARSLKNCSTALSIH*HEVDHF
Trigger: GAAATGGTCAACCTCATGTCAGTGGATGCTCAGCGC...TGTACTGCAGTTTTTAAGAGACCTTGCTCCTGCCTCTACATATGCATATTTTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS-3UTR TCA 90 bp GGAAAATATGCATATGTAGAGGCAGGAGCAAGGTCTCTTAAAAACTGCAGTACAAGGAATTCAACAGCATaGGGATGGTGGGGGCCAGAA +
Preference number: 4 (lower is better)
Translates to: GKYAYVEAGARSLKNCSTRNSTA*GWWGPE
Trigger: TTCTGGCCCCCACCATCCTCATGCTGTTGAATTCCT...TGTACTGCAGTTTTTAAGAGACCTTGCTCCTGCCTCTACATATGCATATTTTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS-3UTR TCA 90 bp TACAGCTTTATTTCATCAGTGGACTCAGACAGCACCAGTACAGGGTCTCTGTTCTGGTGGAGATGGATGTaGAGAAGGAATTCAACAGCA +
Preference number: 4 (lower is better)
Translates to: YSFISSVDSDSTSTGSLFWWRWM*RRNSTA
Trigger: TGCTGTTGAATTCCTTCTTCACATCCATCTCCACCA...GAACAGAGACCCTGTACTGGTGCTGTCTGAGTCCACTGATGAAATAAAGCTGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS-3UTR GCA 90 bp GGAAAATATGCATATGTAGAGGCAGGAGCAAGGTCTCTTAAAAACTGCAGTACACTGCTGCTTTTGCCATaGTTCCAGCAGCCGTTGTAC +
Preference number: 4 (lower is better)
Translates to: GKYAYVEAGARSLKNCSTLLLLP*FQQPLY
Trigger: GTACAACGGCTGCTGGAAGCATGGCAAAAGCAGCAG...TGTACTGCAGTTTTTAAGAGACCTTGCTCCTGCCTCTACATATGCATATTTTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS-3UTR GCA 90 bp AATGTCCCCACTCATGGCCATCGAGTCCATCTGACAAGGAAGAAACCCTTGGAAAGGCCATCACAAAGATaGAGTGGTAATATTGGTGTA +
Preference number: 4 (lower is better)
Translates to: NVPTHGHRVHLTRKKPLERPSQR*SGNIGV
Trigger: TACACCAATATTACCACTGCATCTTTGTGATGGCCT...TTCCAAGGGTTTCTTCCTTGTCAGATGGACTCGATGGCCATGAGTGGGGACATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS-3UTR CCA 90 bp TACAGCTTTATTTCATCAGTGGACTCAGACAGCACCAGTACAGGGTCTCTGTTCAGATCAATGTCTGCATaGTGGAGCTCAGGAACATCA +
Preference number: 4 (lower is better)
Translates to: YSFISSVDSDSTSTGSLFRSMSA*WSSGTS
Trigger: TGATGTTCCTGAGCTCCACCATGCAGACATTGATCT...GAACAGAGACCCTGTACTGGTGCTGTCTGAGTCCACTGATGAAATAAAGCTGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS-3UTR TCA 90 bp ATTGGAAAATATGCATATGTAGAGGCAGGAGCAAGGTCTCTTAAAAACTGCAGTACCCTCTGCCAAAGCTaGGAGGATCTTGGAACGGAA +
Preference number: 4 (lower is better)
Translates to: IGKYAYVEAGARSLKNCSTLCQS*EDLGTE
Trigger: TTCCGTTCCAAGATCCTCTCAGCTTTGGCAGAGGGT...ACTGCAGTTTTTAAGAGACCTTGCTCCTGCCTCTACATATGCATATTTTCCAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS-3UTR TCA 90 bp GTGATCTCTAACTCATTTCCTCATTCCACTGTGAGACAATTTGCAGAATTAAAACCCTTCCGGAGCAGCTaGAGTTCACTCTGCCTGATC +
Preference number: 4 (lower is better)
Translates to: VISNSFPHSTVRQFAELKPFRSS*SSLCLI
Trigger: GATCAGGCAGAGTGAACTTCAGCTGCTCCGGAAGGG...TTTTAATTCTGCAAATTGTCTCACAGTGGAATGAGGAAATGAGTTAGAGATCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS-3UTR TCA 90 bp ATTGGAAAATATGCATATGTAGAGGCAGGAGCAAGGTCTCTTAAAAACTGCAGTAGTCCACTGATTAACTaGGGCAGCATGTTGAGGGGG +
Preference number: 4 (lower is better)
Translates to: IGKYAYVEAGARSLKNCSSPLIN*GSMLRG
Trigger: CCCCCTCAACATGCTGCCTCAGTTAATCAGTGGACT...ACTGCAGTTTTTAAGAGACCTTGCTCCTGCCTCTACATATGCATATTTTCCAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS-3UTR GCA 90 bp TTAAAAACTGCAGTACAGGAATCATGGTGGACTAGACCAGGAGACCCAGGCACTAGGCCATCACAAAGATaGAGTGGTAATATTGGTGTA +
Preference number: 4 (lower is better)
Translates to: LKTAVQESWWTRPGDPGTRPSQR*SGNIGV
Trigger: TACACCAATATTACCACTGCATCTTTGTGATGGCCT...AGTGCCTGGGTCTCCTGGTCTAGTCCACCATGATTCCTGTACTGCAGTTTTTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS-3UTR CCA 90 bp TTGACTACAGCTTTATTTCATCAGTGGACTCAGACAGCACCAGTACAGGGTCTCGGGTCAAGTTCATTTTaGTTCAGGAAATCCTGGATC +
Preference number: 4 (lower is better)
Translates to: LTTALFHQWTQTAPVQGLGSSSF*FRKSWI
Trigger: GATCCAGGATTTCCTGAACCAAAATGAACTTGACCC...GAGACCCTGTACTGGTGCTGTCTGAGTCCACTGATGAAATAAAGCTGTAGTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS-3UTR CCA 90 bp ATTGGAAAATATGCATATGTAGAGGCAGGAGCAAGGTCTCTTAAAAACTGCAGTACTGTCTCCGAAAAGTaGGAGAAGATGGGTGAGCGG +
Preference number: 4 (lower is better)
Translates to: IGKYAYVEAGARSLKNCSTVSEK*EKMGER
Trigger: CCGCTCACCCATCTTCTCCCACTTTTCGGAGACAGT...ACTGCAGTTTTTAAGAGACCTTGCTCCTGCCTCTACATATGCATATTTTCCAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS-3UTR CCA 90 bp GTGATCTCTAACTCATTTCCTCATTCCACTGTGAGACAATTTGCAGAATTAAAACCCACAAACTCCACGTaGACCCCCAGCCATCGATTG +
Preference number: 4 (lower is better)
Translates to: VISNSFPHSTVRQFAELKPTNST*TPSHRL
Trigger: CAATCGATGGCTGGGGGTCCACGTGGAGTTTGTGGG...TTTTAATTCTGCAAATTGTCTCACAGTGGAATGAGGAAATGAGTTAGAGATCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS-3UTR TCA 90 bp GTGATCTCTAACTCATTTCCTCATTCCACTGTGAGACAATTTGCAGAATTAAAATCTGGGGCAGGAAGCTaGTGCCATGAGTTACCAGCA +
Preference number: 4 (lower is better)
Translates to: VISNSFPHSTVRQFAELKSGAGS*CHELPA
Trigger: TGCTGGTAACTCATGGCATCAGCTTCCTGCCCCAGA...TTTTAATTCTGCAAATTGTCTCACAGTGGAATGAGGAAATGAGTTAGAGATCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS-3UTR GCA 90 bp CTACAGCTTTATTTCATCAGTGGACTCAGACAGCACCAGTACAGGGTCTCTGTTCAATGTAGGGATAACTaGTTTTCTGGTTGTTGTCCA +
Preference number: 4 (lower is better)
Translates to: LQLYFISGLRQHQYRVSVQCRDN*FSGCCP
Trigger: TGGACAACAACCAGAAAAGCAGTTATCCCTACATTG...AACAGAGACCCTGTACTGGTGCTGTCTGAGTCCACTGATGAAATAAAGCTGTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS-3UTR GCA 90 bp TACAGCTTTATTTCATCAGTGGACTCAGACAGCACCAGTACAGGGTCTCTGTTCCAATGTAGGGATAACTaGTTTTCTGGTTGTTGTCCA +
Preference number: 4 (lower is better)
Translates to: YSFISSVDSDSTSTGSLFQCRDN*FSGCCP
Trigger: TGGACAACAACCAGAAAAGCAGTTATCCCTACATTG...GAACAGAGACCCTGTACTGGTGCTGTCTGAGTCCACTGATGAAATAAAGCTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS-3UTR CCA 90 bp GGAAAATATGCATATGTAGAGGCAGGAGCAAGGTCTCTTAAAAACTGCAGTACATGGGACCTTGATGCTTaGTTCTGCTGCTTTTGCCAT +
Preference number: 4 (lower is better)
Translates to: GKYAYVEAGARSLKNCSTWDLDA*FCCFCH
Trigger: ATGGCAAAAGCAGCAGAACCAAGCATCAAGGTCCCA...TGTACTGCAGTTTTTAAGAGACCTTGCTCCTGCCTCTACATATGCATATTTTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS-3UTR CCA 90 bp ATTGGAAAATATGCATATGTAGAGGCAGGAGCAAGGTCTCTTAAAAACTGCAGTATGATAAAGTCCGTCTaGGGCAGGAAGCTGATGCCA +
Preference number: 4 (lower is better)
Translates to: IGKYAYVEAGARSLKNCSMIKSV*GRKLMP
Trigger: TGGCATCAGCTTCCTGCCCCAGACGGACTTTATCAT...ACTGCAGTTTTTAAGAGACCTTGCTCCTGCCTCTACATATGCATATTTTCCAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS-3UTR CCA 90 bp ATTGGAAAATATGCATATGTAGAGGCAGGAGCAAGGTCTCTTAAAAACTGCAGTACAGGCAAAGAGTCATaGAAGATTTGCCAGCCCCAG +
Preference number: 4 (lower is better)
Translates to: IGKYAYVEAGARSLKNCSTGKES*KICQPQ
Trigger: CTGGGGCTGGCAAATCTTCCATGACTCTTTGCCTGT...ACTGCAGTTTTTAAGAGACCTTGCTCCTGCCTCTACATATGCATATTTTCCAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS-3UTR TCA 90 bp GTGATCTCTAACTCATTTCCTCATTCCACTGTGAGACAATTTGCAGAATTAAAAAGTCCACTGATTAACTaGGGCAGCATGTTGAGGGGG +
Preference number: 4 (lower is better)
Translates to: VISNSFPHSTVRQFAELKSPLIN*GSMLRG
Trigger: CCCCCTCAACATGCTGCCTCAGTTAATCAGTGGACT...TTTTAATTCTGCAAATTGTCTCACAGTGGAATGAGGAAATGAGTTAGAGATCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS-3UTR GCA 90 bp ATTGGAAAATATGCATATGTAGAGGCAGGAGCAAGGTCTCTTAAAAACTGCAGTCACTCAGCTTCACATTaGCTGTCTCTGCTATCTCCT +
Preference number: 4 (lower is better)
Translates to: IGKYAYVEAGARSLKNCSHSASH*LSLLSP
Trigger: AGGAGATAGCAGAGACAGGCAATGTGAAGCTGAGTG...ACTGCAGTTTTTAAGAGACCTTGCTCCTGCCTCTACATATGCATATTTTCCAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS-3UTR CCA 90 bp GTGATCTCTAACTCATTTCCTCATTCCACTGTGAGACAATTTGCAGAATTAAAAAGAGACACGCTGGCCTaGGTCAGTCCACTGATTAAC +
Preference number: 4 (lower is better)
Translates to: VISNSFPHSTVRQFAELKRDTLA*VSPLIN
Trigger: GTTAATCAGTGGACTGACCCAGGCCAGCGTGTCTCT...TTTTAATTCTGCAAATTGTCTCACAGTGGAATGAGGAAATGAGTTAGAGATCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS-3UTR CCA 90 bp GTGATCTCTAACTCATTTCCTCATTCCACTGTGAGACAATTTGCAGAATTAAAAGAGGTCTTGTTCTGCTaGCCATGTTCCTCCGCATCA +
Preference number: 4 (lower is better)
Translates to: VISNSFPHSTVRQFAELKEVLFC*PCSSAS
Trigger: TGATGCGGAGGAACATGGCCAGCAGAACAAGACCTC...TTTTAATTCTGCAAATTGTCTCACAGTGGAATGAGGAAATGAGTTAGAGATCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS-3UTR CCA 90 bp GTGATCTCTAACTCATTTCCTCATTCCACTGTGAGACAATTTGCAGAATTAAAACAAGTCCCGCATCCTTaGCCATCCCATAGAAGATGC +
Preference number: 4 (lower is better)
Translates to: VISNSFPHSTVRQFAELKQVPHP*PSHRRC
Trigger: GCATCTTCTATGGGATGGCCAAGGATGCGGGACTTG...TTTTAATTCTGCAAATTGTCTCACAGTGGAATGAGGAAATGAGTTAGAGATCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS-3UTR CCA 90 bp ATTGGAAAATATGCATATGTAGAGGCAGGAGCAAGGTCTCTTAAAAACTGCAGTTTGGGGTTCATGGGTTaGCCAAATAGCACATTTTCC +
Preference number: 4 (lower is better)
Translates to: IGKYAYVEAGARSLKNCSLGFMG*PNSTFS
Trigger: GGAAAATGTGCTATTTGGCCAACCCATGAACCCCAA...ACTGCAGTTTTTAAGAGACCTTGCTCCTGCCTCTACATATGCATATTTTCCAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS-3UTR CCA 90 bp ATTGGAAAATATGCATATGTAGAGGCAGGAGCAAGGTCTCTTAAAAACTGCAGTTCCAATTCAAAGCCATaGTCACCTGTAAGGCATAGG +
Preference number: 4 (lower is better)
Translates to: IGKYAYVEAGARSLKNCSSNSKP*SPVRHR
Trigger: CCTATGCCTTACAGGTGACCATGGCTTTGAATTGGA...ACTGCAGTTTTTAAGAGACCTTGCTCCTGCCTCTACATATGCATATTTTCCAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS-3UTR TCA 90 bp ATTGGAAAATATGCATATGTAGAGGCAGGAGCAAGGTCTCTTAAAAACTGCAGTAATAGCACATTTTCCTaGAGTGTGCAGTTCTGGATC +
Preference number: 4 (lower is better)
Translates to: IGKYAYVEAGARSLKNCSNSTFS*SVQFWI
Trigger: GATCCAGAACTGCACACTTCAGGAAAATGTGCTATT...ACTGCAGTTTTTAAGAGACCTTGCTCCTGCCTCTACATATGCATATTTTCCAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS-3UTR TCA 90 bp GTGATCTCTAACTCATTTCCTCATTCCACTGTGAGACAATTTGCAGAATTAAAACGCCTCCTTCTCCAATaGATTTGTGTGTTTCTTGGG +
Preference number: 4 (lower is better)
Translates to: VISNSFPHSTVRQFAELKRLLLQ*ICVFLG
Trigger: CCCAAGAAACACACAAATTCATTGGAGAAGGAGGCG...TTTTAATTCTGCAAATTGTCTCACAGTGGAATGAGGAAATGAGTTAGAGATCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS-3UTR TCA 90 bp GTGATCTCTAACTCATTTCCTCATTCCACTGTGAGACAATTTGCAGAATTAAAAGTGTCAAAGAAGGACTaGGGGGAACGAATCTTGTTG +
Preference number: 4 (lower is better)
Translates to: VISNSFPHSTVRQFAELKVSKKD*GERILL
Trigger: CAACAAGATTCGTTCCCCTCAGTCCTTCTTTGACAC...TTTTAATTCTGCAAATTGTCTCACAGTGGAATGAGGAAATGAGTTAGAGATCAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS-3UTR CCA 90 bp GTGATCTCTAACTCATTTCCTCATTCCACTGTGAGACAATTTGCAGAATTAAAAGGGTCAAGTTCATTTTaGTTCAGGAAATCCTGGATC +
Preference number: 4 (lower is better)
Translates to: VISNSFPHSTVRQFAELKGSSSF*FRKSWI
Trigger: GATCCAGGATTTCCTGAACCAAAATGAACTTGACCC...TTTTAATTCTGCAAATTGTCTCACAGTGGAATGAGGAAATGAGTTAGAGATCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS CCA 90 bp GCCGGTACCGCACTGAATAGTTCCGGAACTCCACCATTCCTCGCGTaGGCCAGCCTTCCGGGGCGCGGTTGCTCTCCACCACCCAGGGGG +
Preference number: 5 (lower is better)
Translates to: AGTALNSSGTPPFLA*ASLPGRGCSPPPRG
Trigger: CCCCCTGGGTGGTGGAGAGCAACCGCGCCCCGGAAGGCTGGCCCACGCGAGGAATGGTGGAGTTCCGGAACTATTCAGTGCGGTACCGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS GCA 90 bp TATCCCCACCCTCAGCGCACTGGAAATCCAGGCCTGCTGGCTGGCTaGTCACGAACGTGTTCAGGTGGGATAGCTCCAGGGCCCTCCAGA +
Preference number: 5 (lower is better)
Translates to: YPHPQRTGNPGLLAG*SRTCSGGIAPGPSR
Trigger: TCTGGAGGGCCCTGGAGCTATCCCACCTGAACACGTTCGTGAGCAGCCAGCCAGCAGGCCTGGATTTCCAGTGCGCTGAGGGTGGGGATA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS CCA 90 bp CGAATCTTGTTGTGCAGCAGAGCTTCGTGCAGCAGGCGGGCAGCCTaGATCGCGCCGACCACCATGGTGAAAGCTGACAGCATGACCAGG +
Preference number: 5 (lower is better)
Translates to: RILLCSRASCSRRAA*IAPTTMVKADSMTR
Trigger: CCTGGTCATGCTGTCAGCTTTCACCATGGTGGTCGGCGCGATCCAGGCTGCCCGCCTGCTGCACGAAGCTCTGCTGCACAACAAGATTCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS CCA 90 bp TGGAAATCCAGGCCTGCTGGCTGGCTGCTCACGAACGTGTTCAGGTaGGATAGCTCCAGGGCCCTCCAGATGTCCTCCTCCGAGTATCGG +
Preference number: 5 (lower is better)
Translates to: WKSRPAGWLLTNVFR*DSSRALQMSSSEYR
Trigger: CCGATACTCGGAGGAGGACATCTGGAGGGCCCTGGAGCTATCCCACCTGAACACGTTCGTGAGCAGCCAGCCAGCAGGCCTGGATTTCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS CCA 90 bp AGATTATCCCCACCCTCAGCGCACTGGAAATCCAGGCCTGCTGGCTaGCTGCTCACGAACGTGTTCAGGTGGGATAGCTCCAGGGCCCTC +
Preference number: 5 (lower is better)
Translates to: RLSPPSAHWKSRPAG*LLTNVFRWDSSRAL
Trigger: GAGGGCCCTGGAGCTATCCCACCTGAACACGTTCGTGAGCAGCCAGCCAGCAGGCCTGGATTTCCAGTGCGCTGAGGGTGGGGATAATCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS TCA 90 bp AGTCACGTTCTTCAGCACCAACTCGAGGCCAGGCCGGTACCGCACTaGATAGTTCCGGAACTCCACCATTCCTCGCGTGGGCCAGCCTTC +
Preference number: 5 (lower is better)
Translates to: SHVLQHQLEARPVPH*IVPELHHSSRGPAF
Trigger: GAAGGCTGGCCCACGCGAGGAATGGTGGAGTTCCGGAACTATTCAGTGCGGTACCGGCCTGGCCTCGAGTTGGTGCTGAAGAACGTGACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS CCA 90 bp CTCCAGGCGCTGAGCCACACATTGGCTCCGATAGCAGCTGCGCTTTaGCCACCATACAGGAGGCAGATAGATAGCGTGGTACAGAGTCCC +
Preference number: 5 (lower is better)
Translates to: LQALSHTLAPIAAAL*PPYRRQIDSVVQSP
Trigger: GGGACTCTGTACCACGCTATCTATCTGCCTCCTGTATGGTGGCCAAAGCGCAGCTGCTATCGGAGCCAATGTGTGGCTCAGCGCCTGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS-3UTR CAA 90 bp TCATGGTGGACTAGACCAGGAGACCCAGGCACTGGTCAGAGCGTGGCTTTGAACTTGGAGTCCCAGAACTaGGAGCCCAGCTCTCCGGAG +
Preference number: 5 (lower is better)
Translates to: SWWTRPGDPGTGQSVALNLESQN*EPSSPE
Trigger: CTCCGGAGAGCTGGGCTCCAAGTTCTGGGACTCCAA...GTTCAAAGCCACGCTCTGACCAGTGCCTGGGTCTCCTGGTCTAGTCCACCATGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS TCA 90 bp AAACGGTTGAGGATGCGGCCCGAGGGCGTGGTGTCAAAGAAGGACTaGGGGGAACGAATCTTGTTGTGCAGCAGAGCTTCGTGCAGCAGG +
Preference number: 5 (lower is better)
Translates to: KRLRMRPEGVVSKKD*GERILLCSRASCSR
Trigger: CCTGCTGCACGAAGCTCTGCTGCACAACAAGATTCGTTCCCCTCAGTCCTTCTTTGACACCACGCCCTCGGGCCGCATCCTCAACCGTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS CCA 90 bp CATGGTCCTCCTGGTCTTCATCTGGTGCGTAGTTTCGGAGGAAGTTaGCAAAGGAGCCATCATGCTGCAGGAGGGCCGAGTAGTGGCCCA +
Preference number: 5 (lower is better)
Translates to: HGPPGLHLVRSFGGS*QRSHHAAGGPSSGP
Trigger: TGGGCCACTACTCGGCCCTCCTGCAGCATGATGGCTCCTTTGCCAACTTCCTCCGAAACTACGCACCAGATGAAGACCAGGAGGACCATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS-3UTR CAA 90 bp CATCAGTGGACTCAGACAGCACCAGTACAGGGTCTCTGTTCCCGGGACAGACTGCTGAGCAGCTGTGGGTaGACGAAGCCGAGTAGGTTC +
Preference number: 5 (lower is better)
Translates to: HQWTQTAPVQGLCSRDRLLSSCG*TKPSRF
Trigger: GAACCTACTCGGCTTCGTCAACCCACAGCTGCTCAG...CAGTCTGTCCCGGGAACAGAGACCCTGTACTGGTGCTGTCTGAGTCCACTGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS TCA 90 bp GGTCCACCCATGAGACACACCACAGCAGAACACCGAGGGCCGTCTTaGGCCTGGATAACCATGAGAGGACTATGTAGCCGAGCTGATGGT +
Preference number: 5 (lower is better)
Translates to: GPPMRHTTAEHRGPS*AWITMRGLCSRADG
Trigger: ACCATCAGCTCGGCTACATAGTCCTCTCATGGTTATCCAGGCTCAAGACGGCCCTCGGTGTTCTGCTGTGGTGTGTCTCATGGGTGGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS CCA 90 bp CCTGGGATCTTTGGCTCAGCTGTTGCCGTCTGGGACCTTGATGCTTaGTTCTGCTGCTTTTGCCATGCTTCCAGCAGCCGTTGTACCACC +
Preference number: 5 (lower is better)
Translates to: PGIFGSAVAVWDLDA*FCCFCHASSSRCTT
Trigger: GGTGGTACAACGGCTGCTGGAAGCATGGCAAAAGCAGCAGAACCAAGCATCAAGGTCCCAGACGGCAACAGCTGAGCCAAAGATCCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS CCA 90 bp AGGACCGCATCCTCACCTGGGATCTTTGGCTCAGCTGTTGCCGTCTaGGACCTTGATGCTTGGTTCTGCTGCTTTTGCCATGCTTCCAGC +
Preference number: 5 (lower is better)
Translates to: RTASSPGIFGSAVAV*DLDAWFCCFCHASS
Trigger: GCTGGAAGCATGGCAAAAGCAGCAGAACCAAGCATCAAGGTCCCAGACGGCAACAGCTGAGCCAAAGATCCCAGGTGAGGATGCGGTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS TCA 90 bp ATCCTCACCTGGGATCTTTGGCTCAGCTGTTGCCGTCTGGGACCTTaGTGCTTGGTTCTGCTGCTTTTGCCATGCTTCCAGCAGCCGTTG +
Preference number: 5 (lower is better)
Translates to: ILTWDLWLSCCRLGP*CLVLLLLPCFQQPL
Trigger: CAACGGCTGCTGGAAGCATGGCAAAAGCAGCAGAACCAAGCATCAAGGTCCCAGACGGCAACAGCTGAGCCAAAGATCCCAGGTGAGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS TCA 90 bp GCAAGCACAATGATAAAGTCCGTCTGGGGCAGGAAGCTGATGCCATaGGTTACCAGCACCCGAGTCTTGCCTGCCAGCACACCTTCTGGT +
Preference number: 5 (lower is better)
Translates to: ASTMIKSVWGRKLMP*VTSTRVLPASTPSG
Trigger: ACCAGAAGGTGTGCTGGCAGGCAAGACTCGGGTGCTGGTAACTCATGGCATCAGCTTCCTGCCCCAGACGGACTTTATCATTGTGCTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS CCA 90 bp GAACCACCAGAAAGACAAGCGGGAAAAGAAGCCAGCGCTGGCCTCTaGGCAAGGATTTGTGTCAAGATTCTCCGGGGAGAACAAAGGCGG +
Preference number: 5 (lower is better)
Translates to: EPPERQAGKEASAGL*ARICVKILRGEQRR
Trigger: CCGCCTTTGTTCTCCCCGGAGAATCTTGACACAAATCCTTGCCCAGAGGCCAGCGCTGGCTTCTTTTCCCGCTTGTCTTTCTGGTGGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS-3UTR CAA 90 bp TCATGGTGGACTAGACCAGGAGACCCAGGCACTGGTCAGAGCGTGGCTTTGAACTCCCGTTTGACTGAGTaGGTGATGACCAGAGCCTTC +
Preference number: 5 (lower is better)
Translates to: SWWTRPGDPGTGQSVALNSRLTE*VMTRAF
Trigger: GAAGGCTCTGGTCATCACCAACTCAGTCAAACGGGA...GTTCAAAGCCACGCTCTGACCAGTGCCTGGGTCTCCTGGTCTAGTCCACCATGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS-3UTR CAA 90 bp TCAGTGGACTCAGACAGCACCAGTACAGGGTCTCTGTTCCCGGGACAGACTGACTCCCAAGCGTACAGCTaGAGCACTTTGATGCCGTTC +
Preference number: 5 (lower is better)
Translates to: SVDSDSTSTGSLFPGQTDSQAYS*STLMPF
Trigger: GAACGGCATCAAAGTGCTCAAGCTGTACGCTTGGGA...GTCAGTCTGTCCCGGGAACAGAGACCCTGTACTGGTGCTGTCTGAGTCCACTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS-3UTR CAA 90 bp AATGTCCCCACTCATGGCCATCGAGTCCATCTGACAAGGAAGAAACCCTTGGAATCCTTGGAGAAACGGTaGAGGATGCGGCCCGAGGGC +
Preference number: 5 (lower is better)
Translates to: NVPTHGHRVHLTRKKPLESLEKR*RMRPEG
Trigger: GCCCTCGGGCCGCATCCTCAACCGTTTCTCCAAGGA...TTCCAAGGGTTTCTTCCTTGTCAGATGGACTCGATGGCCATGAGTGGGGACATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS GCA 90 bp GGGCAGGAAGCTGATGCCATGAGTTACCAGCACCCGAGTCTTGCCTaGCAGCACACCTTCTGGTCCAATCACTTGGTCGAAGATATGCTT +
Preference number: 5 (lower is better)
Translates to: GQEADAMSYQHPSLA*QHTFWSNHLVEDML
Trigger: AAGCATATCTTCGACCAAGTGATTGGACCAGAAGGTGTGCTGGCAGGCAAGACTCGGGTGCTGGTAACTCATGGCATCAGCTTCCTGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS CCA 90 bp GGTCAGCTAGCAGGGCACATGTCTCCAGAGCCTGTTGGTAGCGCTTaGGGTTCATGGGTTGGCCAAATAGCACATTTTCCTGAAGTGTGC +
Preference number: 5 (lower is better)
Translates to: GQLAGHMSPEPVGSA*GSWVGQIAHFPEVC
Trigger: GCACACTTCAGGAAAATGTGCTATTTGGCCAACCCATGAACCCCAAGCGCTACCAACAGGCTCTGGAGACATGTGCCCTGCTAGCTGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS CCA 90 bp GCCATGAGTTACCAGCACCCGAGTCTTGCCTGCCAGCACACCTTCTaGTCCAATCACTTGGTCGAAGATATGCTTCGCCACATGAGAGTC +
Preference number: 5 (lower is better)
Translates to: AMSYQHPSLACQHTF*SNHLVEDMLRHMRV
Trigger: GACTCTCATGTGGCGAAGCATATCTTCGACCAAGTGATTGGACCAGAAGGTGTGCTGGCAGGCAAGACTCGGGTGCTGGTAACTCATGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS CCA 90 bp GGAGCTCATCTCTCTCATGAACTGCTTGCGGACCTCGTAGATGGCTaGCTCATTGTCTGTCAGGTCTGTGTGGGTGCTGAGTGTGTCTTC +
Preference number: 5 (lower is better)
Translates to: GAHLSHELLADLVDG*LIVCQVCVGAECVF
Trigger: GAAGACACACTCAGCACCCACACAGACCTGACAGACAATGAGCCAGCCATCTACGAGGTCCGCAAGCAGTTCATGAGAGAGATGAGCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS-3UTR CAA 90 bp TCATGGTGGACTAGACCAGGAGACCCAGGCACTGGTCAGAGCGTGGCTTTGAACAAAGCTGAGAGGATCTaGGAACGGAAGGGGATGATG +
Preference number: 5 (lower is better)
Translates to: SWWTRPGDPGTGQSVALNKAERI*ERKGMM
Trigger: CATCATCCCCTTCCGTTCCAAGATCCTCTCAGCTTT...GTTCAAAGCCACGCTCTGACCAGTGCCTGGGTCTCCTGGTCTAGTCCACCATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS-3UTR CAA 90 bp TCAGTGGACTCAGACAGCACCAGTACAGGGTCTCTGTTCCCGGGACAGACTGACAGGTTCTGGATCAGGTaGAAACAGGCACTCATGAGC +
Preference number: 5 (lower is better)
Translates to: SVDSDSTSTGSLFPGQTDRFWIR*KQALMS
Trigger: GCTCATGAGTGCCTGTTTCAACCTGATCCAGAACCT...GTCAGTCTGTCCCGGGAACAGAGACCCTGTACTGGTGCTGTCTGAGTCCACTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS-3UTR CAA 90 bp TATTTCATCAGTGGACTCAGACAGCACCAGTACAGGGTCTCTGTTCCCGGGACACTGAGCAGCTGTGGGTaGACGAAGCCGAGTAGGTTC +
Preference number: 5 (lower is better)
Translates to: YFISGLRQHQYRVSVPGTLSSCG*TKPSRF
Trigger: GAACCTACTCGGCTTCGTCAACCCACAGCTGCTCAG...TGTCCCGGGAACAGAGACCCTGTACTGGTGCTGTCTGAGTCCACTGATGAAATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS-3UTR CAA 90 bp TCATGGTGGACTAGACCAGGAGACCCAGGCACTGGTCAGAGCGTGGCTTTGAACTACAGCTTGAGCACTTaGATGCCGTTCAGGATCTCG +
Preference number: 5 (lower is better)
Translates to: SWWTRPGDPGTGQSVALNYSLST*MPFRIS
Trigger: CGAGATCCTGAACGGCATCAAAGTGCTCAAGCTGTA...GTTCAAAGCCACGCTCTGACCAGTGCCTGGGTCTCCTGGTCTAGTCCACCATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS-3UTR CAA 90 bp TCAGTGGACTCAGACAGCACCAGTACAGGGTCTCTGTTCCCGGGACAGACTGACTACAGCTTGAGCACTTaGATGCCGTTCAGGATCTCG +
Preference number: 5 (lower is better)
Translates to: SVDSDSTSTGSLFPGQTDYSLST*MPFRIS
Trigger: CGAGATCCTGAACGGCATCAAAGTGCTCAAGCTGTA...GTCAGTCTGTCCCGGGAACAGAGACCCTGTACTGGTGCTGTCTGAGTCCACTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS-3UTR CAA 90 bp AATGTCCCCACTCATGGCCATCGAGTCCATCTGACAAGGAAGAAACCCTTGGAAATGGATTCCAGCCGCTaGAGCTGCCGTGATGTGGCC +
Preference number: 5 (lower is better)
Translates to: NVPTHGHRVHLTRKKPLEMDSSR*SCRDVA
Trigger: GGCCACATCACGGCAGCTCAAGCGGCTGGAATCCAT...TTCCAAGGGTTTCTTCCTTGTCAGATGGACTCGATGGCCATGAGTGGGGACATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS TCA 90 bp GGTTCTGGACCTCCCCTTCAGAAGACAAGGAGCTCATCTCTCTCATaGACTGCTTGCGGACCTCGTAGATGGCTGGCTCATTGTCTGTCA +
Preference number: 5 (lower is better)
Translates to: GSGPPLQKTRSSSLS*TACGPRRWLAHCLS
Trigger: TGACAGACAATGAGCCAGCCATCTACGAGGTCCGCAAGCAGTTCATGAGAGAGATGAGCTCCTTGTCTTCTGAAGGGGAGGTCCAGAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS TCA 90 bp TGCGCCAGTCTCCTTAGTCTTTGTCACCAGCGCCTCCTTCTCCAATaGATTTGTGTGTTTCTTGGGCATAGTCCGGTTCTGGACCTCCCC +
Preference number: 5 (lower is better)
Translates to: CASLLSLCHQRLLLQ*ICVFLGHSPVLDLP
Trigger: GGGGAGGTCCAGAACCGGACTATGCCCAAGAAACACACAAATTCATTGGAGAAGGAGGCGCTGGTGACAAAGACTAAGGAGACTGGCGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS GCA 90 bp GATGGGCCCAGGATCTGCCAGAGGAAGTATATTGCCAGGATGACCTaGAAAGGTGCAGACCACAGCAGATTGATGAAAGGGGAGACATCC +
Preference number: 5 (lower is better)
Translates to: DGPRICQRKYIARMT*KGADHSRLMKGETS
Trigger: GGATGTCTCCCCTTTCATCAATCTGCTGTGGTCTGCACCTTTGCAGGTCATCCTGGCAATATACTTCCTCTGGCAGATCCTGGGCCCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS GCA 90 bp AGAAAGACCCACAAGCCCTGGATTCAAGCTGTTTCTCCCGATCACTaGAAACAGTGCGGCAAAGAGCACCACGCAGTTCCCCACAAACTC +
Preference number: 5 (lower is better)
Translates to: RKTHKPWIQAVSPDH*KQCGKEHHAVPHKL
Trigger: GAGTTTGTGGGGAACTGCGTGGTGCTCTTTGCCGCACTGTTTGCAGTGATCGGGAGAAACAGCTTGAATCCAGGGCTTGTGGGTCTTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS GCA 90 bp GCCAATGTGTGCCACGTTGAGCCCATCAATGACGATCTCACCCTCTaGGGCCTCCAGGATTCGGAACAGGCAAAGAGTCATGGAAGATTT +
Preference number: 5 (lower is better)
Translates to: ANVCHVEPINDDLTL*GLQDSEQAKSHGRF
Trigger: AAATCTTCCATGACTCTTTGCCTGTTCCGAATCCTGGAGGCCGCAGAGGGTGAGATCGTCATTGATGGGCTCAACGTGGCACACATTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS CCA 90 bp GCAGGGCACATGTCTCCAGAGCCTGTTGGTAGCGCTTGGGGTTCATaGGTTGGCCAAATAGCACATTTTCCTGAAGTGTGCAGTTCTGGA +
Preference number: 5 (lower is better)
Translates to: AGHMSPEPVGSAWGS*VGQIAHFPEVCSSG
Trigger: TCCAGAACTGCACACTTCAGGAAAATGTGCTATTTGGCCAACCCATGAACCCCAAGCGCTACCAACAGGCTCTGGAGACATGTGCCCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS-3UTR CAA 90 bp TATTTCATCAGTGGACTCAGACAGCACCAGTACAGGGTCTCTGTTCCCGGGACATTGGTTCTGCTGCTTTaGCCATGCTTCCAGCAGCCG +
Preference number: 5 (lower is better)
Translates to: YFISGLRQHQYRVSVPGTLVLLL*PCFQQP
Trigger: CGGCTGCTGGAAGCATGGCAAAAGCAGCAGAACCAA...TGTCCCGGGAACAGAGACCCTGTACTGGTGCTGTCTGAGTCCACTGATGAAATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS-3UTR CAA 90 bp TCAGTGGACTCAGACAGCACCAGTACAGGGTCTCTGTTCCCGGGACAGACTGACATGGACACAGCTCCATaGAGTGGTATCAGCAAGACT +
Preference number: 5 (lower is better)
Translates to: SVDSDSTSTGSLFPGQTDMDTAP*SGISKT
Trigger: AGTCTTGCTGATACCACTCAATGGAGCTGTGTCCAT...GTCAGTCTGTCCCGGGAACAGAGACCCTGTACTGGTGCTGTCTGAGTCCACTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS-3UTR CAA 90 bp TTGACTACAGCTTTATTTCATCAGTGGACTCAGACAGCACCAGTACAGGGTCTCGCGCTGAGCCACACATaGGCTCCGATAGCAGCTGCG +
Preference number: 5 (lower is better)
Translates to: LTTALFHQWTQTAPVQGLALSHT*APIAAA
Trigger: CGCAGCTGCTATCGGAGCCAATGTGTGGCTCAGCGC...GAGACCCTGTACTGGTGCTGTCTGAGTCCACTGATGAAATAAAGCTGTAGTCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS-3UTR CAA 90 bp TACAGCTTTATTTCATCAGTGGACTCAGACAGCACCAGTACAGGGTCTCTGTTCTCCTTGGAGAAACGGTaGAGGATGCGGCCCGAGGGC +
Preference number: 5 (lower is better)
Translates to: YSFISSVDSDSTSTGSLFSLEKR*RMRPEG
Trigger: GCCCTCGGGCCGCATCCTCAACCGTTTCTCCAAGGA...GAACAGAGACCCTGTACTGGTGCTGTCTGAGTCCACTGATGAAATAAAGCTGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS TCA 90 bp CCTCGTAGATGGCTGGCTCATTGTCTGTCAGGTCTGTGTGGGTGCTaGGTGTGTCTTCGAGCAGGAGTACCTCCTCATTTGCATTTTGCA +
Preference number: 5 (lower is better)
Translates to: PRRWLAHCLSGLCGC*VCLRAGVPPHLHFA
Trigger: TGCAAAATGCAAATGAGGAGGTACTCCTGCTCGAAGACACACTCAGCACCCACACAGACCTGACAGACAATGAGCCAGCCATCTACGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS GCA 90 bp TGTGTGGGTGCTGAGTGTGTCTTCGAGCAGGAGTACCTCCTCATTTaGATTTTGCAAGGCTTCATGGTCCTCCTGGTCTTCATCTGGTGC +
Preference number: 5 (lower is better)
Translates to: CVGAECVFEQEYLLI*ILQGFMVLLVFIWC
Trigger: GCACCAGATGAAGACCAGGAGGACCATGAAGCCTTGCAAAATGCAAATGAGGAGGTACTCCTGCTCGAAGACACACTCAGCACCCACACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021231.8
CDS GCA 90 bp TGCATTTTGCAAGGCTGCTTCATGGTCCTCCTGGTCTTCATCTGGTaGGTAGTTTCGGAGGAAGTTGGCAAAGGAGCCATCATGCTGCAG +
Preference number: 5 (lower is better)
Translates to: CILQGCFMVLLVFIW*VVSEEVGKGAIMLQ
Trigger: CTGCAGCATGATGGCTCCTTTGCCAACTTCCTCCGAAACTACGCACCAGATGAAGACCAGGAGGACCATGAAGCAGCCTTGCAAAATGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000178136.8
CDS GCA 90 bp TGTGTGGGTGCTGAGTGTGTCTTCGAGCAGGAGTACCTCCTCATTTaGATTTTGCAAGGCTGCTTCATGGTCCTCCTGGTCTTCATCTGG +
Preference number: 5 (lower is better)
Translates to: CVGAECVFEQEYLLI*ILQGCFMVLLVFIW
Trigger: CCAGATGAAGACCAGGAGGACCATGAAGCAGCCTTGCAAAATGCAAATGAGGAGGTACTCCTGCTCGAAGACACACTCAGCACCCACACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000178136.8
CDS-3UTR CAA 90 bp AATGTCCCCACTCATGGCCATCGAGTCCATCTGACAAGGAAGAAACCCTTGGAATCTTTGGCTCAGCTGTaGCCGTCTGGGACCTTGATG +
Preference number: 5 (lower is better)
Translates to: NVPTHGHRVHLTRKKPLESLAQL*PSGTLM
Trigger: CATCAAGGTCCCAGACGGCAACAGCTGAGCCAAAGA...TTCCAAGGGTTTCTTCCTTGTCAGATGGACTCGATGGCCATGAGTGGGGACATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS-3UTR CAA 90 bp TATTTCATCAGTGGACTCAGACAGCACCAGTACAGGGTCTCTGTTCCCGGGACATCCCGTTTGACTGAGTaGGTGATGACCAGAGCCTTC +
Preference number: 5 (lower is better)
Translates to: YFISGLRQHQYRVSVPGTSRLTE*VMTRAF
Trigger: GAAGGCTCTGGTCATCACCAACTCAGTCAAACGGGA...TGTCCCGGGAACAGAGACCCTGTACTGGTGCTGTCTGAGTCCACTGATGAAATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS-3UTR CAA 90 bp CTTTATTTCATCAGTGGACTCAGACAGCACCAGTACAGGGTCTCTGTTCCCGGGACAGTGGACTCCCGTTaGACTGAGTTGGTGATGACC +
Preference number: 5 (lower is better)
Translates to: LYFISGLRQHQYRVSVPGTVDSR*TELVMT
Trigger: GGTCATCACCAACTCAGTCAAACGGGAGTCCACTGT...CCCGGGAACAGAGACCCTGTACTGGTGCTGTCTGAGTCCACTGATGAAATAAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS-3UTR CAA 90 bp TCATGGTGGACTAGACCAGGAGACCCAGGCACTGGTCAGAGCGTGGCTTTGAACTTGATGCGGGAGTCCTaGAACTTCATTTGCTTTACC +
Preference number: 5 (lower is better)
Translates to: SWWTRPGDPGTGQSVALNLMRES*NFICFT
Trigger: GGTAAAGCAAATGAAGTTCAAGGACTCCCGCATCAA...GTTCAAAGCCACGCTCTGACCAGTGCCTGGGTCTCCTGGTCTAGTCCACCATGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS-3UTR CAA 90 bp TCAGTGGACTCAGACAGCACCAGTACAGGGTCTCTGTTCCCGGGACAGACTGACGGGGTCAAGTTCATTTaGGTTCAGGAAATCCTGGAT +
Preference number: 5 (lower is better)
Translates to: SVDSDSTSTGSLFPGQTDGVKFI*VQEILD
Trigger: ATCCAGGATTTCCTGAACCAAAATGAACTTGACCCC...GTCAGTCTGTCCCGGGAACAGAGACCCTGTACTGGTGCTGTCTGAGTCCACTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS-3UTR CAA 90 bp TCATGGTGGACTAGACCAGGAGACCCAGGCACTGGTCAGAGCGTGGCTTTGAACCTGCTTTTCTGGTTGTaGTCCACCTTAGTATCACTG +
Preference number: 5 (lower is better)
Translates to: SWWTRPGDPGTGQSVALNLLFWL*STLVSL
Trigger: CAGTGATACTAAGGTGGACAACAACCAGAAAAGCAG...GTTCAAAGCCACGCTCTGACCAGTGCCTGGGTCTCCTGGTCTAGTCCACCATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS-3UTR CAA 90 bp TATTTCATCAGTGGACTCAGACAGCACCAGTACAGGGTCTCTGTTCCCGGGACACCAATGTGTGCCACGTaGAGCCCATCAATGACGATC +
Preference number: 5 (lower is better)
Translates to: YFISGLRQHQYRVSVPGTPMCAT*SPSMTI
Trigger: GATCGTCATTGATGGGCTCAACGTGGCACACATTGG...TGTCCCGGGAACAGAGACCCTGTACTGGTGCTGTCTGAGTCCACTGATGAAATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS TCA 90 bp AGTGGTGAACCGGAACGGATCCAAGATTTTACCCTCTGCCAAAGCTaGGAGGATCTTGGAACGGAAGGGGATGATGGCACAGATCACACA +
Preference number: 5 (lower is better)
Translates to: SGEPERIQDFTLCQS*EDLGTEGDDGTDHT
Trigger: TGTGTGATCTGTGCCATCATCCCCTTCCGTTCCAAGATCCTCTCAGCTTTGGCAGAGGGTAAAATCTTGGATCCGTTCCGGTTCACCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS CCA 90 bp ATGAGTATACTGAGCAGCTGTGGGTTGACGAAGCCGAGTAGGTTCTaGATCAGGTTGAAACAGGCACTCATGAGCAAGCTGGAGGTGAAG +
Preference number: 5 (lower is better)
Translates to: MSILSSCGLTKPSRF*IRLKQALMSKLEVK
Trigger: CTTCACCTCCAGCTTGCTCATGAGTGCCTGTTTCAACCTGATCCAGAACCTACTCGGCTTCGTCAACCCACAGCTGCTCAGTATACTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS CCA 90 bp CAAAGATGCAGTGGTAATATTGGTGTAAGATCAATGTCTGCATGGTaGAGCTCAGGAACATCAGTCCGGCCAGCAAGAAGCCCCACCAGG +
Preference number: 5 (lower is better)
Translates to: QRCSGNIGVRSMSAW*SSGTSVRPARSPTR
Trigger: CCTGGTGGGGCTTCTTGCTGGCCGGACTGATGTTCCTGAGCTCCACCATGCAGACATTGATCTTACACCAATATTACCACTGCATCTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS CCA 90 bp CTTGGCCATCCCATAGAAGATGCCTCCGGCCGCAATGAGGTTGACTaGAGAATCAAATTCAGCTACTACTCCTTTGTCCAAGACCAGGAC +
Preference number: 5 (lower is better)
Translates to: LGHPIEDASGRNEVD*RIKFSYYSFVQDQD
Trigger: GTCCTGGTCTTGGACAAAGGAGTAGTAGCTGAATTTGATTCTCCAGTCAACCTCATTGCGGCCGGAGGCATCTTCTATGGGATGGCCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS-3UTR CAA 90 bp TTAAAAACTGCAGTACAGGAATCATGGTGGACTAGACCAGGAGACCCAGGCACTTCTTTGGCTCAGCTGTaGCCGTCTGGGACCTTGATG +
Preference number: 5 (lower is better)
Translates to: LKTAVQESWWTRPGDPGTSLAQL*PSGTLM
Trigger: CATCAAGGTCCCAGACGGCAACAGCTGAGCCAAAGA...AGTGCCTGGGTCTCCTGGTCTAGTCCACCATGATTCCTGTACTGCAGTTTTTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS-3UTR CAA 90 bp CAGCTTTATTTCATCAGTGGACTCAGACAGCACCAGTACAGGGTCTCTGTTCCCTCCCAAGCGTACAGCTaGAGCACTTTGATGCCGTTC +
Preference number: 5 (lower is better)
Translates to: QLYFISGLRQHQYRVSVPSQAYS*STLMPF
Trigger: GAACGGCATCAAAGTGCTCAAGCTGTACGCTTGGGA...GGGAACAGAGACCCTGTACTGGTGCTGTCTGAGTCCACTGATGAAATAAAGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS-3UTR CAA 90 bp CTTTATTTCATCAGTGGACTCAGACAGCACCAGTACAGGGTCTCTGTTCCCGGGACACTCAGCTTCACATaGCCTGTCTCTGCTATCTCC +
Preference number: 5 (lower is better)
Translates to: LYFISGLRQHQYRVSVPGTLSFT*PVSAIS
Trigger: GGAGATAGCAGAGACAGGCAATGTGAAGCTGAGTGT...CCCGGGAACAGAGACCCTGTACTGGTGCTGTCTGAGTCCACTGATGAAATAAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS-3UTR CAA 90 bp AATGTCCCCACTCATGGCCATCGAGTCCATCTGACAAGGAAGAAACCCTTGGAATCAGCTACTACTCCTTaGTCCAAGACCAGGACCCTG +
Preference number: 5 (lower is better)
Translates to: NVPTHGHRVHLTRKKPLESATTP*SKTRTL
Trigger: CAGGGTCCTGGTCTTGGACAAAGGAGTAGTAGCTGA...TTCCAAGGGTTTCTTCCTTGTCAGATGGACTCGATGGCCATGAGTGGGGACATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS GCA 90 bp ATTTGCATTTTGCAAGGCTTCATGGTCCTCCTGGTCTTCATCTGGTaGGTAGTTTCGGAGGAAGTTGGCAAAGGAGCCATCATGCTGCAG +
Preference number: 5 (lower is better)
Translates to: ICILQGFMVLLVFIW*VVSEEVGKGAIMLQ
Trigger: CTGCAGCATGATGGCTCCTTTGCCAACTTCCTCCGAAACTACGCACCAGATGAAGACCAGGAGGACCATGAAGCCTTGCAAAATGCAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021231.8
CDS CCA 90 bp TCACAAAGATGCAGTGGTAATATTGGTGTAAGATCAATGTCTGCATaGTGGAGCTCAGGAACATCAGTCCGGCCAGCAAGAAGCCCCACC +
Preference number: 5 (lower is better)
Translates to: SQRCSGNIGVRSMSA*WSSGTSVRPARSPT
Trigger: GGTGGGGCTTCTTGCTGGCCGGACTGATGTTCCTGAGCTCCACCATGCAGACATTGATCTTACACCAATATTACCACTGCATCTTTGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS CCA 90 bp CTCATTTGCATTTTGCAAGGCTTCATGGTCCTCCTGGTCTTCATCTaGTGCGTAGTTTCGGAGGAAGTTGGCAAAGGAGCCATCATGCTG +
Preference number: 5 (lower is better)
Translates to: LICILQGFMVLLVFI*CVVSEEVGKGAIML
Trigger: CAGCATGATGGCTCCTTTGCCAACTTCCTCCGAAACTACGCACCAGATGAAGACCAGGAGGACCATGAAGCCTTGCAAAATGCAAATGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021231.8
CDS CCA 90 bp ATTTGCATTTTGCAAGGCTGCTTCATGGTCCTCCTGGTCTTCATCTaGTGCGTAGTTTCGGAGGAAGTTGGCAAAGGAGCCATCATGCTG +
Preference number: 5 (lower is better)
Translates to: ICILQGCFMVLLVFI*CVVSEEVGKGAIML
Trigger: CAGCATGATGGCTCCTTTGCCAACTTCCTCCGAAACTACGCACCAGATGAAGACCAGGAGGACCATGAAGCAGCCTTGCAAAATGCAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000178136.8
CDS-3UTR CAA 90 bp AATGTCCCCACTCATGGCCATCGAGTCCATCTGACAAGGAAGAAACCCTTGGAAAGGTTCTGGATCAGGTaGAAACAGGCACTCATGAGC +
Preference number: 5 (lower is better)
Translates to: NVPTHGHRVHLTRKKPLERFWIR*KQALMS
Trigger: GCTCATGAGTGCCTGTTTCAACCTGATCCAGAACCT...TTCCAAGGGTTTCTTCCTTGTCAGATGGACTCGATGGCCATGAGTGGGGACATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS-3UTR CAA 90 bp CATCAGTGGACTCAGACAGCACCAGTACAGGGTCTCTGTTCCCGGGACAGACTGGGGATCTTTAAGATATaGAACAAAGACAGGGACACA +
Preference number: 5 (lower is better)
Translates to: HQWTQTAPVQGLCSRDRLGIFKI*NKDRDT
Trigger: TGTGTCCCTGTCTTTGTTCAATATCTTAAAGATCCC...CAGTCTGTCCCGGGAACAGAGACCCTGTACTGGTGCTGTCTGAGTCCACTGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS-3UTR CAA 90 bp TACAGCTTTATTTCATCAGTGGACTCAGACAGCACCAGTACAGGGTCTCTGTTCTGTCTCCAGAGCCTGTaGGTAGCGCTTGGGGTTCAT +
Preference number: 5 (lower is better)
Translates to: YSFISSVDSDSTSTGSLFCLQSL*VALGVH
Trigger: ATGAACCCCAAGCGCTACCAACAGGCTCTGGAGACA...GAACAGAGACCCTGTACTGGTGCTGTCTGAGTCCACTGATGAAATAAAGCTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS-3UTR CAA 90 bp CTACAGCTTTATTTCATCAGTGGACTCAGACAGCACCAGTACAGGGTCTCTGTTTGTCTCCAGAGCCTGTaGGTAGCGCTTGGGGTTCAT +
Preference number: 5 (lower is better)
Translates to: LQLYFISGLRQHQYRVSVCLQSL*VALGVH
Trigger: ATGAACCCCAAGCGCTACCAACAGGCTCTGGAGACA...AACAGAGACCCTGTACTGGTGCTGTCTGAGTCCACTGATGAAATAAAGCTGTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS-3UTR CAA 90 bp AATGTCCCCACTCATGGCCATCGAGTCCATCTGACAAGGAAGAAACCCTTGGAAGTATCACTGAGGACCTaGAAGTCTTGGATTCGGCCA +
Preference number: 5 (lower is better)
Translates to: NVPTHGHRVHLTRKKPLEVSLRT*KSWIRP
Trigger: TGGCCGAATCCAAGACTTCAAGGTCCTCAGTGATAC...TTCCAAGGGTTTCTTCCTTGTCAGATGGACTCGATGGCCATGAGTGGGGACATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS-3UTR CAA 90 bp CTACAGCTTTATTTCATCAGTGGACTCAGACAGCACCAGTACAGGGTCTCTGTTCAGGGGGCCTCAGTCTaGGTCTTAGAGTACTCCTTG +
Preference number: 5 (lower is better)
Translates to: LQLYFISGLRQHQYRVSVQGASV*VLEYSL
Trigger: CAAGGAGTACTCTAAGACCAAGACTGAGGCCCCCTG...AACAGAGACCCTGTACTGGTGCTGTCTGAGTCCACTGATGAAATAAAGCTGTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS-3UTR CAA 90 bp TTGACTACAGCTTTATTTCATCAGTGGACTCAGACAGCACCAGTACAGGGTCTCCAGGGGGCCTCAGTCTaGGTCTTAGAGTACTCCTTG +
Preference number: 5 (lower is better)
Translates to: LTTALFHQWTQTAPVQGLQGASV*VLEYSL
Trigger: CAAGGAGTACTCTAAGACCAAGACTGAGGCCCCCTG...GAGACCCTGTACTGGTGCTGTCTGAGTCCACTGATGAAATAAAGCTGTAGTCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS-3UTR CAA 90 bp CAGCTTTATTTCATCAGTGGACTCAGACAGCACCAGTACAGGGTCTCTGTTCCCCCGGCCGCAATGAGGTaGACTGGAGAATCAAATTCA +
Preference number: 5 (lower is better)
Translates to: QLYFISGLRQHQYRVSVPPAAMR*TGESNS
Trigger: TGAATTTGATTCTCCAGTCAACCTCATTGCGGCCGG...GGGAACAGAGACCCTGTACTGGTGCTGTCTGAGTCCACTGATGAAATAAAGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS-3UTR CAA 90 bp TTGACTACAGCTTTATTTCATCAGTGGACTCAGACAGCACCAGTACAGGGTCTCACAGTGGACTCCCGTTaGACTGAGTTGGTGATGACC +
Preference number: 5 (lower is better)
Translates to: LTTALFHQWTQTAPVQGLTVDSR*TELVMT
Trigger: GGTCATCACCAACTCAGTCAAACGGGAGTCCACTGT...GAGACCCTGTACTGGTGCTGTCTGAGTCCACTGATGAAATAAAGCTGTAGTCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS-3UTR CAA 90 bp AATGTCCCCACTCATGGCCATCGAGTCCATCTGACAAGGAAGAAACCCTTGGAAATGGACACAGCTCCATaGAGTGGTATCAGCAAGACT +
Preference number: 5 (lower is better)
Translates to: NVPTHGHRVHLTRKKPLEMDTAP*SGISKT
Trigger: AGTCTTGCTGATACCACTCAATGGAGCTGTGTCCAT...TTCCAAGGGTTTCTTCCTTGTCAGATGGACTCGATGGCCATGAGTGGGGACATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS-3UTR CAA 90 bp CTTTATTTCATCAGTGGACTCAGACAGCACCAGTACAGGGTCTCTGTTCCCGGGGGGGTCAAGTTCATTTaGGTTCAGGAAATCCTGGAT +
Preference number: 5 (lower is better)
Translates to: LYFISGLRQHQYRVSVPGGVKFI*VQEILD
Trigger: ATCCAGGATTTCCTGAACCAAAATGAACTTGACCCC...CCCGGGAACAGAGACCCTGTACTGGTGCTGTCTGAGTCCACTGATGAAATAAAG
49% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS-3UTR CAA 90 bp CTACAGCTTTATTTCATCAGTGGACTCAGACAGCACCAGTACAGGGTCTCTGTTCCAATGTGTGCCACGTaGAGCCCATCAATGACGATC +
Preference number: 5 (lower is better)
Translates to: LQLYFISGLRQHQYRVSVPMCAT*SPSMTI
Trigger: GATCGTCATTGATGGGCTCAACGTGGCACACATTGG...AACAGAGACCCTGTACTGGTGCTGTCTGAGTCCACTGATGAAATAAAGCTGTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS TCA 90 bp ATCCGTTTCAGAGACACGCTGGCCTGGGTCAGTCCACTGATTAACTaGGGCAGCATGTTGAGGGGGATCTTTAAGATATTGAACAAAGAC +
Preference number: 5 (lower is better)
Translates to: IRFRDTLAWVSPLIN*GSMLRGIFKILNKD
Trigger: GTCTTTGTTCAATATCTTAAAGATCCCCCTCAACATGCTGCCTCAGTTAATCAGTGGACTGACCCAGGCCAGCGTGTCTCTGAAACGGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS-3UTR CAA 90 bp TTGACTACAGCTTTATTTCATCAGTGGACTCAGACAGCACCAGTACAGGGTCTCAAAGCTGAGAGGATCTaGGAACGGAAGGGGATGATG +
Preference number: 5 (lower is better)
Translates to: LTTALFHQWTQTAPVQGLKAERI*ERKGMM
Trigger: CATCATCCCCTTCCGTTCCAAGATCCTCTCAGCTTT...GAGACCCTGTACTGGTGCTGTCTGAGTCCACTGATGAAATAAAGCTGTAGTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS-3UTR CAA 90 bp CTTTATTTCATCAGTGGACTCAGACAGCACCAGTACAGGGTCTCTGTTCCCGGGCTTTCTTTCCACACATaGGGGGTCAAGTTCATTTTG +
Preference number: 5 (lower is better)
Translates to: LYFISGLRQHQYRVSVPGLSFHT*GVKFIL
Trigger: CAAAATGAACTTGACCCCCAATGTGTGGAAAGAAAG...CCCGGGAACAGAGACCCTGTACTGGTGCTGTCTGAGTCCACTGATGAAATAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS-3UTR CAA 90 bp ATTGGAAAATATGCATATGTAGAGGCAGGAGCAAGGTCTCTTAAAAACTGCAGTATGGATTCCAGCCGCTaGAGCTGCCGTGATGTGGCC +
Preference number: 5 (lower is better)
Translates to: IGKYAYVEAGARSLKNCSMDSSR*SCRDVA
Trigger: GGCCACATCACGGCAGCTCAAGCGGCTGGAATCCAT...ACTGCAGTTTTTAAGAGACCTTGCTCCTGCCTCTACATATGCATATTTTCCAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS-3UTR CAA 90 bp TTGACTACAGCTTTATTTCATCAGTGGACTCAGACAGCACCAGTACAGGGTCTCGTATCACTGAGGACCTaGAAGTCTTGGATTCGGCCA +
Preference number: 5 (lower is better)
Translates to: LTTALFHQWTQTAPVQGLVSLRT*KSWIRP
Trigger: TGGCCGAATCCAAGACTTCAAGGTCCTCAGTGATAC...GAGACCCTGTACTGGTGCTGTCTGAGTCCACTGATGAAATAAAGCTGTAGTCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS-3UTR CAA 90 bp TTGACTACAGCTTTATTTCATCAGTGGACTCAGACAGCACCAGTACAGGGTCTCGTGAGGTCCGGAGTGTaGGTATATATAGACAGGTTG +
Preference number: 5 (lower is better)
Translates to: LTTALFHQWTQTAPVQGLVRSGV*VYIDRL
Trigger: CAACCTGTCTATATATACCAACACTCCGGACCTCAC...GAGACCCTGTACTGGTGCTGTCTGAGTCCACTGATGAAATAAAGCTGTAGTCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS-3UTR CAA 90 bp GGAAAATATGCATATGTAGAGGCAGGAGCAAGGTCTCTTAAAAACTGCAGTACAAAAGGCGGCTTCTCCTaGAAGCAGGACAGGATGAGG +
Preference number: 5 (lower is better)
Translates to: GKYAYVEAGARSLKNCSTKGGFS*KQDRMR
Trigger: CCTCATCCTGTCCTGCTTCAAGGAGAAGCCGCCTTT...TGTACTGCAGTTTTTAAGAGACCTTGCTCCTGCCTCTACATATGCATATTTTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS-3UTR CAA 90 bp TACAGCTTTATTTCATCAGTGGACTCAGACAGCACCAGTACAGGGTCTCTGTTCCTCCTCATTTGCATTTaGCAAGGCTTCATGGTCCTC +
Preference number: 5 (lower is better)
Translates to: YSFISSVDSDSTSTGSLFLLICI*QGFMVL
Trigger: GAGGACCATGAAGCCTTGCAAAATGCAAATGAGGAG...GAACAGAGACCCTGTACTGGTGCTGTCTGAGTCCACTGATGAAATAAAGCTGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021231.8
CDS-3UTR CAA 90 bp GTGATCTCTAACTCATTTCCTCATTCCACTGTGAGACAATTTGCAGAATTAAAAGCGCTGAGCCACACATaGGCTCCGATAGCAGCTGCG +
Preference number: 5 (lower is better)
Translates to: VISNSFPHSTVRQFAELKALSHT*APIAAA
Trigger: CGCAGCTGCTATCGGAGCCAATGTGTGGCTCAGCGC...TTTTAATTCTGCAAATTGTCTCACAGTGGAATGAGGAAATGAGTTAGAGATCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS-3UTR CAA 90 bp TTAAAAACTGCAGTACAGGAATCATGGTGGACTAGACCAGGAGACCCAGGCACTCTGCTTTTCTGGTTGTaGTCCACCTTAGTATCACTG +
Preference number: 5 (lower is better)
Translates to: LKTAVQESWWTRPGDPGTLLFWL*STLVSL
Trigger: CAGTGATACTAAGGTGGACAACAACCAGAAAAGCAG...AGTGCCTGGGTCTCCTGGTCTAGTCCACCATGATTCCTGTACTGCAGTTTTTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS-3UTR CAA 90 bp GTGATCTCTAACTCATTTCCTCATTCCACTGTGAGACAATTTGCAGAATTAAAATTGGAGTCCCAGAACTaGGAGCCCAGCTCTCCGGAG +
Preference number: 5 (lower is better)
Translates to: VISNSFPHSTVRQFAELKLESQN*EPSSPE
Trigger: CTCCGGAGAGCTGGGCTCCAAGTTCTGGGACTCCAA...TTTTAATTCTGCAAATTGTCTCACAGTGGAATGAGGAAATGAGTTAGAGATCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS-3UTR CAA 90 bp CTACAGCTTTATTTCATCAGTGGACTCAGACAGCACCAGTACAGGGTCTCTGTTTTGATGCGGGAGTCCTaGAACTTCATTTGCTTTACC +
Preference number: 5 (lower is better)
Translates to: LQLYFISGLRQHQYRVSVLMRES*NFICFT
Trigger: GGTAAAGCAAATGAAGTTCAAGGACTCCCGCATCAA...AACAGAGACCCTGTACTGGTGCTGTCTGAGTCCACTGATGAAATAAAGCTGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS-3UTR CAA 90 bp GTGATCTCTAACTCATTTCCTCATTCCACTGTGAGACAATTTGCAGAATTAAAATTGGTTCTGCTGCTTTaGCCATGCTTCCAGCAGCCG +
Preference number: 5 (lower is better)
Translates to: VISNSFPHSTVRQFAELKLVLLL*PCFQQP
Trigger: CGGCTGCTGGAAGCATGGCAAAAGCAGCAGAACCAA...TTTTAATTCTGCAAATTGTCTCACAGTGGAATGAGGAAATGAGTTAGAGATCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS-3UTR CAA 90 bp GGAAAATATGCATATGTAGAGGCAGGAGCAAGGTCTCTTAAAAACTGCAGTACACTCCTCATTTGCATTTaGCAAGGCTGCTTCATGGTC +
Preference number: 5 (lower is better)
Translates to: GKYAYVEAGARSLKNCSTLLICI*QGCFMV
Trigger: GACCATGAAGCAGCCTTGCAAAATGCAAATGAGGAG...TGTACTGCAGTTTTTAAGAGACCTTGCTCCTGCCTCTACATATGCATATTTTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000178136.8
CDS-3UTR CAA 90 bp GGAAAATATGCATATGTAGAGGCAGGAGCAAGGTCTCTTAAAAACTGCAGTACACTTTCTTTCCACACATaGGGGGTCAAGTTCATTTTG +
Preference number: 5 (lower is better)
Translates to: GKYAYVEAGARSLKNCSTLSFHT*GVKFIL
Trigger: CAAAATGAACTTGACCCCCAATGTGTGGAAAGAAAG...TGTACTGCAGTTTTTAAGAGACCTTGCTCCTGCCTCTACATATGCATATTTTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS-3UTR CAA 90 bp GTGATCTCTAACTCATTTCCTCATTCCACTGTGAGACAATTTGCAGAATTAAAAACACTCAGCTTCACATaGCCTGTCTCTGCTATCTCC +
Preference number: 5 (lower is better)
Translates to: VISNSFPHSTVRQFAELKTLSFT*PVSAIS
Trigger: GGAGATAGCAGAGACAGGCAATGTGAAGCTGAGTGT...TTTTAATTCTGCAAATTGTCTCACAGTGGAATGAGGAAATGAGTTAGAGATCAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS-3UTR CAA 90 bp GGAAAATATGCATATGTAGAGGCAGGAGCAAGGTCTCTTAAAAACTGCAGTACAGGGATCTTTAAGATATaGAACAAAGACAGGGACACA +
Preference number: 5 (lower is better)
Translates to: GKYAYVEAGARSLKNCSTGIFKI*NKDRDT
Trigger: TGTGTCCCTGTCTTTGTTCAATATCTTAAAGATCCC...TGTACTGCAGTTTTTAAGAGACCTTGCTCCTGCCTCTACATATGCATATTTTCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS GCA 72 bp CCATTCCTCGCGTGGGCCAGCCTTCCGGGGCGCGGTTaGTCTCCACCACCCAGGGGGCCTCAGTCTTGGTCT +
Preference number: 6 (lower is better)
Translates to: PFLAWASLPGRG*SPPPRGPQSWS
Trigger: AGACCAAGACTGAGGCCCCCTGGGTGGTGGAGAGCAACCGCGCCCCGGAAGGCTGGCCCACGCGAGGAATGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS CAA 72 bp ACCATTCCTCGCGTGGGCCAGCCTTCCGGGGCGCGGTaGCTCTCCACCACCCAGGGGGCCTCAGTCTTGGTC +
Preference number: 6 (lower is better)
Translates to: TIPRVGQPSGAR*LSTTQGASVLV
Trigger: GACCAAGACTGAGGCCCCCTGGGTGGTGGAGAGCAACCGCGCCCCGGAAGGCTGGCCCACGCGAGGAATGGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS CAA 90 bp CGGAACTCCACCATTCCTCGCGTGGGCCAGCCTTCCGGGGCGCGGTaGCTCTCCACCACCCAGGGGGCCTCAGTCTTGGTCTTAGAGTAC +
Preference number: 6 (lower is better)
Translates to: RNSTIPRVGQPSGAR*LSTTQGASVLVLEY
Trigger: GTACTCTAAGACCAAGACTGAGGCCCCCTGGGTGGTGGAGAGCAACCGCGCCCCGGAAGGCTGGCCCACGCGAGGAATGGTGGAGTTCCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS CCA 72 bp TTGTGCAGCAGAGCTTCGTGCAGCAGGCGGGCAGCCTaGATCGCGCCGACCACCATGGTGAAAGCTGACAGC +
Preference number: 6 (lower is better)
Translates to: LCSRASCSRRAA*IAPTTMVKADS
Trigger: GCTGTCAGCTTTCACCATGGTGGTCGGCGCGATCCAGGCTGCCCGCCTGCTGCACGAAGCTCTGCTGCACAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS CCA 72 bp GCACTGAATAGTTCCGGAACTCCACCATTCCTCGCGTaGGCCAGCCTTCCGGGGCGCGGTTGCTCTCCACCA +
Preference number: 6 (lower is better)
Translates to: ALNSSGTPPFLA*ASLPGRGCSPP
Trigger: TGGTGGAGAGCAACCGCGCCCCGGAAGGCTGGCCCACGCGAGGAATGGTGGAGTTCCGGAACTATTCAGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS CCA 72 bp AGGCCTGCTGGCTGGCTGCTCACGAACGTGTTCAGGTaGGATAGCTCCAGGGCCCTCCAGATGTCCTCCTCC +
Preference number: 6 (lower is better)
Translates to: RPAGWLLTNVFR*DSSRALQMSSS
Trigger: GGAGGAGGACATCTGGAGGGCCCTGGAGCTATCCCACCTGAACACGTTCGTGAGCAGCCAGCCAGCAGGCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS TCA 72 bp GGTCCCACCACAGCCACCAATGCCCCCTTCGGGATTTaGATGTTTAGGCTGTGCAGGGTGGGCGGCAGGTCC +
Preference number: 6 (lower is better)
Translates to: GPTTATNAPFGI*MFRLCRVGGRS
Trigger: GGACCTGCCGCCCACCCTGCACAGCCTAAACATTCAAATCCCGAAGGGGGCATTGGTGGCTGTGGTGGGACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS GCA 72 bp CCTCAGCGCACTGGAAATCCAGGCCTGCTGGCTGGCTaGTCACGAACGTGTTCAGGTGGGATAGCTCCAGGG +
Preference number: 6 (lower is better)
Translates to: PQRTGNPGLLAG*SRTCSGGIAPG
Trigger: CCCTGGAGCTATCCCACCTGAACACGTTCGTGAGCAGCCAGCCAGCAGGCCTGGATTTCCAGTGCGCTGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS CCA 72 bp CCACCCTCAGCGCACTGGAAATCCAGGCCTGCTGGCTaGCTGCTCACGAACGTGTTCAGGTGGGATAGCTCC +
Preference number: 6 (lower is better)
Translates to: PPSAHWKSRPAG*LLTNVFRWDSS
Trigger: GGAGCTATCCCACCTGAACACGTTCGTGAGCAGCCAGCCAGCAGGCCTGGATTTCCAGTGCGCTGAGGGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS TCA 72 bp CTTCAGCACCAACTCGAGGCCAGGCCGGTACCGCACTaGATAGTTCCGGAACTCCACCATTCCTCGCGTGGG +
Preference number: 6 (lower is better)
Translates to: LQHQLEARPVPH*IVPELHHSSRG
Trigger: CCCACGCGAGGAATGGTGGAGTTCCGGAACTATTCAGTGCGGTACCGGCCTGGCCTCGAGTTGGTGCTGAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS CAA 72 bp GTGGGGGCCAGAACCTCGTCGATGACGTATATGTCCTaGGAGAAACGGTTGAGGATGCGGCCCGAGGGCGTG +
Preference number: 6 (lower is better)
Translates to: VGARTSSMTYMS*EKRLRMRPEGV
Trigger: CACGCCCTCGGGCCGCATCCTCAACCGTTTCTCCAAGGACATATACGTCATCGACGAGGTTCTGGCCCCCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS CAA 90 bp TGGCCATGTTCCTCCGCATCATTGCTCCAGGCGCTGAGCCACACATaGGCTCCGATAGCAGCTGCGCTTTGGCCACCATACAGGAGGCAG +
Preference number: 6 (lower is better)
Translates to: WPCSSASLLQALSHT*APIAAALWPPYRRQ
Trigger: CTGCCTCCTGTATGGTGGCCAAAGCGCAGCTGCTATCGGAGCCAATGTGTGGCTCAGCGCCTGGAGCAATGATGCGGAGGAACATGGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS TCA 72 bp GCCCGTTACTGTCTCCGAAAAGTGGGAGAAGATGGGTaGGCGGCTGATGGATTCCAGCCGCTTGAGCTGCCG +
Preference number: 6 (lower is better)
Translates to: ARYCLRKVGEDG*AADGFQPLELP
Trigger: CGGCAGCTCAAGCGGCTGGAATCCATCAGCCGCTCACCCATCTTCTCCCACTTTTCGGAGACAGTAACGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS GCA 72 bp GGTGAGCTGAGAGCGCAGGTCGTGGAGGCCAATGTGTaGCACGTTGAGCCCATCAATGACGATCTCACCCTC +
Preference number: 6 (lower is better)
Translates to: GELRAQVVEANV*HVEPINDDLTL
Trigger: GAGGGTGAGATCGTCATTGATGGGCTCAACGTGGCACACATTGGCCTCCACGACCTGCGCTCTCAGCTCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS CCA 72 bp CTGCGGCCTCCAGGATTCGGAACAGGCAAAGAGTCATaGAAGATTTGCCAGCCCCAGTGCGGCCCACAATGC +
Preference number: 6 (lower is better)
Translates to: LRPPGFGTGKES*KICQPQCGPQC
Trigger: GCATTGTGGGCCGCACTGGGGCTGGCAAATCTTCCATGACTCTTTGCCTGTTCCGAATCCTGGAGGCCGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS CAA 72 bp TCCTCCGCATCATTGCTCCAGGCGCTGAGCCACACATaGGCTCCGATAGCAGCTGCGCTTTGGCCACCATAC +
Preference number: 6 (lower is better)
Translates to: SSASLLQALSHT*APIAAALWPPY
Trigger: GTATGGTGGCCAAAGCGCAGCTGCTATCGGAGCCAATGTGTGGCTCAGCGCCTGGAGCAATGATGCGGAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS CAA 90 bp AGCCTTACGGAGGTCTTGTTCTGCTGGCCATGTTCCTCCGCATCATaGCTCCAGGCGCTGAGCCACACATTGGCTCCGATAGCAGCTGCG +
Preference number: 6 (lower is better)
Translates to: SLTEVLFCWPCSSAS*LQALSHTLAPIAAA
Trigger: CGCAGCTGCTATCGGAGCCAATGTGTGGCTCAGCGCCTGGAGCAATGATGCGGAGGAACATGGCCAGCAGAACAAGACCTCCGTAAGGCT
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS CAA 90 bp ATGAGGATGGTGGGGGCCAGAACCTCGTCGATGACGTATATGTCCTaGGAGAAACGGTTGAGGATGCGGCCCGAGGGCGTGGTGTCAAAG +
Preference number: 6 (lower is better)
Translates to: MRMVGARTSSMTYMS*EKRLRMRPEGVVSK
Trigger: CTTTGACACCACGCCCTCGGGCCGCATCCTCAACCGTTTCTCCAAGGACATATACGTCATCGACGAGGTTCTGGCCCCCACCATCCTCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS TCA 72 bp CGGCCCACAATGCCTACCTTCTCCCCACCCTGCACATaGACAGTCACGTTCTTCAGCACCAACTCGAGGCCA +
Preference number: 6 (lower is better)
Translates to: RPTMPTFSPPCT*TVTFFSTNSRP
Trigger: TGGCCTCGAGTTGGTGCTGAAGAACGTGACTGTTCATGTGCAGGGTGGGGAGAAGGTAGGCATTGTGGGCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS CCA 72 bp TCACCAAAGCCCTCAGAAAGGAAGGCTGCTTGGACTTaGGTCGGGGCTTCAGTAGGACCGCATCCTCACCTG +
Preference number: 6 (lower is better)
Translates to: SPKPSERKAAWT*VGASVGPHPHL
Trigger: CAGGTGAGGATGCGGTCCTACTGAAGCCCCGACCCAAGTCCAAGCAGCCTTCCTTTCTGAGGGCTTTGGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS CAA 72 bp GTGTTGGTATATATAGACAGGTTGGAGTCCCAGAACTaGGAGCCCAGCTCTCCGGAGCCGCACAGGCGGTCC +
Preference number: 6 (lower is better)
Translates to: VLVYIDRLESQN*EPSSPEPHRRS
Trigger: GGACCGCCTGTGCGGCTCCGGAGAGCTGGGCTCCAAGTTCTGGGACTCCAACCTGTCTATATATACCAACAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS CAA 72 bp GGACCGCATCCTCACCTGGGATCTTTGGCTCAGCTGTaGCCGTCTGGGACCTTGATGCTTGGTTCTGCTGCT +
Preference number: 6 (lower is better)
Translates to: GPHPHLGSLAQL*PSGTLMLGSAA
Trigger: AGCAGCAGAACCAAGCATCAAGGTCCCAGACGGCAACAGCTGAGCCAAAGATCCCAGGTGAGGATGCGGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS CAA 72 bp CTCACCAAAGCCCTCAGAAAGGAAGGCTGCTTGGACTaGGGTCGGGGCTTCAGTAGGACCGCATCCTCACCT +
Preference number: 6 (lower is better)
Translates to: LTKALRKEGCLD*GRGFSRTASSP
Trigger: AGGTGAGGATGCGGTCCTACTGAAGCCCCGACCCAAGTCCAAGCAGCCTTCCTTTCTGAGGGCTTTGGTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS CAA 90 bp CAGCACCCGAGTCTTGCCTGCCAGCACACCTTCTGGTCCAATCACTaGGTCGAAGATATGCTTCGCCACATGAGAGTCCACAGCCGACAG +
Preference number: 6 (lower is better)
Translates to: QHPSLACQHTFWSNH*VEDMLRHMRVHSRQ
Trigger: CTGTCGGCTGTGGACTCTCATGTGGCGAAGCATATCTTCGACCAAGTGATTGGACCAGAAGGTGTGCTGGCAGGCAAGACTCGGGTGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS TCA 72 bp GATCAGGCCGTGGAAGGAATAGAACAGGTCCACCCATaGGACACACCACAGCAGAACACCGAGGGCCGTCTT +
Preference number: 6 (lower is better)
Translates to: DQAVEGIEQVHP*DTPQQNTEGRL
Trigger: AAGACGGCCCTCGGTGTTCTGCTGTGGTGTGTCTCATGGGTGGACCTGTTCTATTCCTTCCACGGCCTGATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS GCA 72 bp GCTGTTGCCGTCTGGGACCTTGATGCTTGGTTCTGCTaGTTTTGCCATGCTTCCAGCAGCCGTTGTACCACC +
Preference number: 6 (lower is better)
Translates to: AVAVWDLDAWFC*FCHASSSRCTT
Trigger: GGTGGTACAACGGCTGCTGGAAGCATGGCAAAAGCAGCAGAACCAAGCATCAAGGTCCCAGACGGCAACAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS GCA 72 bp GTGAAGGTTCTCACCAAAGCCCTCAGAAAGGAAGGCTaGTTGGACTTGGGTCGGGGCTTCAGTAGGACCGCA +
Preference number: 6 (lower is better)
Translates to: VKVLTKALRKEG*LDLGRGFSRTA
Trigger: TGCGGTCCTACTGAAGCCCCGACCCAAGTCCAAGCAGCCTTCCTTTCTGAGGGCTTTGGTGAGAACCTTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS CCA 72 bp AGGTTCTCACCAAAGCCCTCAGAAAGGAAGGCTGCTTaGACTTGGGTCGGGGCTTCAGTAGGACCGCATCCT +
Preference number: 6 (lower is better)
Translates to: RFSPKPSERKAA*TWVGASVGPHP
Trigger: AGGATGCGGTCCTACTGAAGCCCCGACCCAAGTCCAAGCAGCCTTCCTTTCTGAGGGCTTTGGTGAGAACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS CCA 72 bp CACGTACACTCCGAGGGTGATCAGGGTCACCAGAAATaGGGTGCAGATCCAGATGAAGGTGGAGATGGCCTG +
Preference number: 6 (lower is better)
Translates to: HVHSEGDQGHQK*GADPDEGGDGL
Trigger: CAGGCCATCTCCACCTTCATCTGGATCTGCACCCCATTTCTGGTGACCCTGATCACCCTCGGAGTGTACGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS CCA 72 bp CCTGGTCTTCATCTGGTGCGTAGTTTCGGAGGAAGTTaGCAAAGGAGCCATCATGCTGCAGGAGGGCCGAGT +
Preference number: 6 (lower is better)
Translates to: PGLHLVRSFGGS*QRSHHAAGGPS
Trigger: ACTCGGCCCTCCTGCAGCATGATGGCTCCTTTGCCAACTTCCTCCGAAACTACGCACCAGATGAAGACCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS CAA 72 bp GAGGTCTTGTTCTGCTGGCCATGTTCCTCCGCATCATaGCTCCAGGCGCTGAGCCACACATTGGCTCCGATA +
Preference number: 6 (lower is better)
Translates to: EVLFCWPCSSAS*LQALSHTLAPI
Trigger: TATCGGAGCCAATGTGTGGCTCAGCGCCTGGAGCAATGATGCGGAGGAACATGGCCAGCAGAACAAGACCTC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS CAA 90 bp CATCCTCACCTGGGATCTTTGGCTCAGCTGTTGCCGTCTGGGACCTaGATGCTTGGTTCTGCTGCTTTTGCCATGCTTCCAGCAGCCGTT +
Preference number: 6 (lower is better)
Translates to: HPHLGSLAQLLPSGT*MLGSAAFAMLPAAV
Trigger: AACGGCTGCTGGAAGCATGGCAAAAGCAGCAGAACCAAGCATCAAGGTCCCAGACGGCAACAGCTGAGCCAAAGATCCCAGGTGAGGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS CAA 90 bp GCTTCAGTAGGACCGCATCCTCACCTGGGATCTTTGGCTCAGCTGTaGCCGTCTGGGACCTTGATGCTTGGTTCTGCTGCTTTTGCCATG +
Preference number: 6 (lower is better)
Translates to: ASVGPHPHLGSLAQL*PSGTLMLGSAAFAM
Trigger: CATGGCAAAAGCAGCAGAACCAAGCATCAAGGTCCCAGACGGCAACAGCTGAGCCAAAGATCCCAGGTGAGGATGCGGTCCTACTGAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS TCA 72 bp ATGATAAAGTCCGTCTGGGGCAGGAAGCTGATGCCATaGGTTACCAGCACCCGAGTCTTGCCTGCCAGCACA +
Preference number: 6 (lower is better)
Translates to: MIKSVWGRKLMP*VTSTRVLPAST
Trigger: TGTGCTGGCAGGCAAGACTCGGGTGCTGGTAACTCATGGCATCAGCTTCCTGCCCCAGACGGACTTTATCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS TCA 72 bp TGCAGTCTTCAAACTGGGTACGGATGGTGCCCTGGATaGGGTCATCCGTCTCCAAGTCAATGGCAGCAGTGG +
Preference number: 6 (lower is better)
Translates to: CSLQTGYGWCPG*GHPSPSQWQQW
Trigger: CCACTGCTGCCATTGACTTGGAGACGGATGACCTCATCCAGGGCACCATCCGTACCCAGTTTGAAGACTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS GCA 72 bp TCAGCTGTTGCCGTCTGGGACCTTGATGCTTGGTTCTaGTGCTTTTGCCATGCTTCCAGCAGCCGTTGTACC +
Preference number: 6 (lower is better)
Translates to: SAVAVWDLDAWF*CFCHASSSRCT
Trigger: GGTACAACGGCTGCTGGAAGCATGGCAAAAGCAGCAGAACCAAGCATCAAGGTCCCAGACGGCAACAGCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS GCA 72 bp TGCCACGTTGAGCCCATCAATGACGATCTCACCCTCTaGGGCCTCCAGGATTCGGAACAGGCAAAGAGTCAT +
Preference number: 6 (lower is better)
Translates to: CHVEPINDDLTL*GLQDSEQAKSH
Trigger: ATGACTCTTTGCCTGTTCCGAATCCTGGAGGCCGCAGAGGGTGAGATCGTCATTGATGGGCTCAACGTGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS CCA 72 bp TACCAGCACCCGAGTCTTGCCTGCCAGCACACCTTCTaGTCCAATCACTTGGTCGAAGATATGCTTCGCCAC +
Preference number: 6 (lower is better)
Translates to: YQHPSLACQHTF*SNHLVEDMLRH
Trigger: GTGGCGAAGCATATCTTCGACCAAGTGATTGGACCAGAAGGTGTGCTGGCAGGCAAGACTCGGGTGCTGGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS CCA 72 bp CTCTCTCATGAACTGCTTGCGGACCTCGTAGATGGCTaGCTCATTGTCTGTCAGGTCTGTGTGGGTGCTGAG +
Preference number: 6 (lower is better)
Translates to: LSHELLADLVDG*LIVCQVCVGAE
Trigger: CTCAGCACCCACACAGACCTGACAGACAATGAGCCAGCCATCTACGAGGTCCGCAAGCAGTTCATGAGAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS CCA 72 bp CTGAGCCACACATTGGCTCCGATAGCAGCTGCGCTTTaGCCACCATACAGGAGGCAGATAGATAGCGTGGTA +
Preference number: 6 (lower is better)
Translates to: LSHTLAPIAAAL*PPYRRQIDSVV
Trigger: TACCACGCTATCTATCTGCCTCCTGTATGGTGGCCAAAGCGCAGCTGCTATCGGAGCCAATGTGTGGCTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS CCA 72 bp CGAATGACACTGGTGCCCGTTACTGTCTCCGAAAAGTaGGAGAAGATGGGTGAGCGGCTGATGGATTCCAGC +
Preference number: 6 (lower is better)
Translates to: RMTLVPVTVSEK*EKMGERLMDSS
Trigger: GCTGGAATCCATCAGCCGCTCACCCATCTTCTCCCACTTTTCGGAGACAGTAACGGGCACCAGTGTCATTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS CAA 72 bp GGTGTGAGGTCCGGAGTGTTGGTATATATAGACAGGTaGGAGTCCCAGAACTTGGAGCCCAGCTCTCCGGAG +
Preference number: 6 (lower is better)
Translates to: GVRSGVLVYIDR*ESQNLEPSSPE
Trigger: CTCCGGAGAGCTGGGCTCCAAGTTCTGGGACTCCAACCTGTCTATATATACCAACACTCCGGACCTCACACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS CAA 72 bp TCAAGATTCTCCGGGGAGAACAAAGGCGGCTTCTCCTaGAAGCAGGACAGGATGAGGGCACAGAACACCAGG +
Preference number: 6 (lower is better)
Translates to: SRFSGENKGGFS*KQDRMRAQNTR
Trigger: CCTGGTGTTCTGTGCCCTCATCCTGTCCTGCTTCAAGGAGAAGCCGCCTTTGTTCTCCCCGGAGAATCTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS CAA 90 bp CAGGCCAGCAAGGAGTTCTGGAAACAGGGTGTGAGGTCCGGAGTGTaGGTATATATAGACAGGTTGGAGTCCCAGAACTTGGAGCCCAGC +
Preference number: 6 (lower is better)
Translates to: QASKEFWKQGVRSGV*VYIDRLESQNLEPS
Trigger: GCTGGGCTCCAAGTTCTGGGACTCCAACCTGTCTATATATACCAACACTCCGGACCTCACACCCTGTTTCCAGAACTCCTTGCTGGCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS CAA 90 bp CTGAGCAGCTGTGGGTTGACGAAGCCGAGTAGGTTCTGGATCAGGTaGAAACAGGCACTCATGAGCAAGCTGGAGGTGAAGGTTCTCACC +
Preference number: 6 (lower is better)
Translates to: LSSCGLTKPSRFWIR*KQALMSKLEVKVLT
Trigger: GGTGAGAACCTTCACCTCCAGCTTGCTCATGAGTGCCTGTTTCAACCTGATCCAGAACCTACTCGGCTTCGTCAACCCACAGCTGCTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS TCA 72 bp ATGAGACACACCACAGCAGAACACCGAGGGCCGTCTTaGGCCTGGATAACCATGAGAGGACTATGTAGCCGA +
Preference number: 6 (lower is better)
Translates to: MRHTTAEHRGPS*AWITMRGLCSR
Trigger: TCGGCTACATAGTCCTCTCATGGTTATCCAGGCTCAAGACGGCCCTCGGTGTTCTGCTGTGGTGTGTCTCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS TCA 72 bp CACCAAGGGTGTGACAAAGAAGACAGGAGCAGGGGATaGGCCATGGATCAGGCCGTGGAAGGAATAGAACAG +
Preference number: 6 (lower is better)
Translates to: HQGCDKEDRSRG*AMDQAVEGIEQ
Trigger: CTGTTCTATTCCTTCCACGGCCTGATCCATGGCTCATCCCCTGCTCCTGTCTTCTTTGTCACACCCTTGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS TCA 72 bp TTTTGCCATGCTTCCAGCAGCCGTTGTACCACCTTGTaGGAGCAGTCCTCCTCAGACAGAGACCAGAGGTCA +
Preference number: 6 (lower is better)
Translates to: FCHASSSRCTTL*EQSSSDRDQRS
Trigger: TGACCTCTGGTCTCTGTCTGAGGAGGACTGCTCTCACAAGGTGGTACAACGGCTGCTGGAAGCATGGCAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS TCA 72 bp CATTGCTCTCGTCCACATACACGTACACTCCGAGGGTaGTCAGGGTCACCAGAAATGGGGTGCAGATCCAGA +
Preference number: 6 (lower is better)
Translates to: HCSRPHTRTLRG*SGSPEMGCRSR
Trigger: TCTGGATCTGCACCCCATTTCTGGTGACCCTGATCACCCTCGGAGTGTACGTGTATGTGGACGAGAGCAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS TCA 72 bp TGGCTGGCTCATTGTCTGTCAGGTCTGTGTGGGTGCTaGGTGTGTCTTCGAGCAGGAGTACCTCCTCATTTG +
Preference number: 6 (lower is better)
Translates to: WLAHCLSGLCGC*VCLRAGVPPHL
Trigger: CAAATGAGGAGGTACTCCTGCTCGAAGACACACTCAGCACCCACACAGACCTGACAGACAATGAGCCAGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS TCA 72 bp CCTCCCCTTCAGAAGACAAGGAGCTCATCTCTCTCATaGACTGCTTGCGGACCTCGTAGATGGCTGGCTCAT +
Preference number: 6 (lower is better)
Translates to: PPLQKTRSSSLS*TACGPRRWLAH
Trigger: ATGAGCCAGCCATCTACGAGGTCCGCAAGCAGTTCATGAGAGAGATGAGCTCCTTGTCTTCTGAAGGGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS CCA 72 bp GAAAGACAAGCGGGAAAAGAAGCCAGCGCTGGCCTCTaGGCAAGGATTTGTGTCAAGATTCTCCGGGGAGAA +
Preference number: 6 (lower is better)
Translates to: ERQAGKEASAGL*ARICVKILRGE
Trigger: TTCTCCCCGGAGAATCTTGACACAAATCCTTGCCCAGAGGCCAGCGCTGGCTTCTTTTCCCGCTTGTCTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS CCA 72 bp ACCACCAGAAAGACAAGCGGGAAAAGAAGCCAGCGCTaGCCTCTGGGCAAGGATTTGTGTCAAGATTCTCCG +
Preference number: 6 (lower is better)
Translates to: TTRKTSGKRSQR*PLGKDLCQDSP
Trigger: CGGAGAATCTTGACACAAATCCTTGCCCAGAGGCCAGCGCTGGCTTCTTTTCCCGCTTGTCTTTCTGGTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS CCA 72 bp CTGAGCAGCTGTGGGTTGACGAAGCCGAGTAGGTTCTaGATCAGGTTGAAACAGGCACTCATGAGCAAGCTG +
Preference number: 6 (lower is better)
Translates to: LSSCGLTKPSRF*IRLKQALMSKL
Trigger: CAGCTTGCTCATGAGTGCCTGTTTCAACCTGATCCAGAACCTACTCGGCTTCGTCAACCCACAGCTGCTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS CCA 72 bp GCAGGGCACATGTCTCCAGAGCCTGTTGGTAGCGCTTaGGGTTCATGGGTTGGCCAAATAGCACATTTTCCT +
Preference number: 6 (lower is better)
Translates to: AGHMSPEPVGSA*GSWVGQIAHFP
Trigger: AGGAAAATGTGCTATTTGGCCAACCCATGAACCCCAAGCGCTACCAACAGGCTCTGGAGACATGTGCCCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS CAA 72 bp TTGGTTCTGCTGCTTTTGCCATGCTTCCAGCAGCCGTaGTACCACCTTGTGAGAGCAGTCCTCCTCAGACAG +
Preference number: 6 (lower is better)
Translates to: LVLLLLPCFQQP*YHLVRAVLLRQ
Trigger: CTGTCTGAGGAGGACTGCTCTCACAAGGTGGTACAACGGCTGCTGGAAGCATGGCAAAAGCAGCAGAACCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS TCA 72 bp CCGGAACGGATCCAAGATTTTACCCTCTGCCAAAGCTaGGAGGATCTTGGAACGGAAGGGGATGATGGCACA +
Preference number: 6 (lower is better)
Translates to: PERIQDFTLCQS*EDLGTEGDDGT
Trigger: TGTGCCATCATCCCCTTCCGTTCCAAGATCCTCTCAGCTTTGGCAGAGGGTAAAATCTTGGATCCGTTCCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS GCA 72 bp TTGCAAGGCTTCATGGTCCTCCTGGTCTTCATCTGGTaGGTAGTTTCGGAGGAAGTTGGCAAAGGAGCCATC +
Preference number: 6 (lower is better)
Translates to: LQGFMVLLVFIW*VVSEEVGKGAI
Trigger: GATGGCTCCTTTGCCAACTTCCTCCGAAACTACGCACCAGATGAAGACCAGGAGGACCATGAAGCCTTGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021231.8
CDS GCA 72 bp GCTGAGTGTGTCTTCGAGCAGGAGTACCTCCTCATTTaGATTTTGCAAGGCTGCTTCATGGTCCTCCTGGTC +
Preference number: 6 (lower is better)
Translates to: AECVFEQEYLLI*ILQGCFMVLLV
Trigger: GACCAGGAGGACCATGAAGCAGCCTTGCAAAATGCAAATGAGGAGGTACTCCTGCTCGAAGACACACTCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000178136.8
CDS CAA 72 bp AGTCTTGCCTGCCAGCACACCTTCTGGTCCAATCACTaGGTCGAAGATATGCTTCGCCACATGAGAGTCCAC +
Preference number: 6 (lower is better)
Translates to: SLACQHTFWSNH*VEDMLRHMRVH
Trigger: GTGGACTCTCATGTGGCGAAGCATATCTTCGACCAAGTGATTGGACCAGAAGGTGTGCTGGCAGGCAAGACT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS CAA 72 bp GTTGTCCACCTTAGTATCACTGAGGACCTTGAAGTCTaGGATTCGGCCATAGGCCCGAATGACACTGGTGCC +
Preference number: 6 (lower is better)
Translates to: VVHLSITEDLEV*DSAIGPNDTGA
Trigger: GGCACCAGTGTCATTCGGGCCTATGGCCGAATCCAAGACTTCAAGGTCCTCAGTGATACTAAGGTGGACAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS CAA 90 bp GGTGCTGAGTGTGTCTTCGAGCAGGAGTACCTCCTCATTTGCATTTaGCAAGGCTGCTTCATGGTCCTCCTGGTCTTCATCTGGTGCGTA +
Preference number: 6 (lower is better)
Translates to: GAECVFEQEYLLICI*QGCFMVLLVFIWCV
Trigger: TACGCACCAGATGAAGACCAGGAGGACCATGAAGCAGCCTTGCAAAATGCAAATGAGGAGGTACTCCTGCTCGAAGACACACTCAGCACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000178136.8
CDS CAA 90 bp GGTGCTGAGTGTGTCTTCGAGCAGGAGTACCTCCTCATTTGCATTTaGCAAGGCTTCATGGTCCTCCTGGTCTTCATCTGGTGCGTAGTT +
Preference number: 6 (lower is better)
Translates to: GAECVFEQEYLLICI*QGFMVLLVFIWCVV
Trigger: AACTACGCACCAGATGAAGACCAGGAGGACCATGAAGCCTTGCAAAATGCAAATGAGGAGGTACTCCTGCTCGAAGACACACTCAGCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021231.8
CDS CAA 90 bp CTCTCCACCACCCAGGGGGCCTCAGTCTTGGTCTTAGAGTACTCCTaGACTCTCTCCACAGCTATGATATTAGACTCCAAGTCGGATATC +
Preference number: 6 (lower is better)
Translates to: LSTTQGASVLVLEYS*TLSTAMILDSKSDI
Trigger: GATATCCGACTTGGAGTCTAATATCATAGCTGTGGAGAGAGTCAAGGAGTACTCTAAGACCAAGACTGAGGCCCCCTGGGTGGTGGAGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS GCA 72 bp GCTGAGTGTGTCTTCGAGCAGGAGTACCTCCTCATTTaGATTTTGCAAGGCTTCATGGTCCTCCTGGTCTTC +
Preference number: 6 (lower is better)
Translates to: AECVFEQEYLLI*ILQGFMVLLVF
Trigger: GAAGACCAGGAGGACCATGAAGCCTTGCAAAATGCAAATGAGGAGGTACTCCTGCTCGAAGACACACTCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021231.8
CDS GCA 72 bp GAGCAGGAGTACCTCCTCATTTGCATTTTGCAAGGCTaGTTCATGGTCCTCCTGGTCTTCATCTGGTGCGTA +
Preference number: 6 (lower is better)
Translates to: EQEYLLICILQG*FMVLLVFIWCV
Trigger: TACGCACCAGATGAAGACCAGGAGGACCATGAAGCAGCCTTGCAAAATGCAAATGAGGAGGTACTCCTGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000178136.8
CDS CCA 72 bp CATTGGGGGTCAAGTTCATTTTGGTTCAGGAAATCCTaGATCCGTTTCAGAGACACGCTGGCCTGGGTCAGT +
Preference number: 6 (lower is better)
Translates to: HWGSSSFWFRKS*IRFRDTLAWVS
Trigger: ACTGACCCAGGCCAGCGTGTCTCTGAAACGGATCCAGGATTTCCTGAACCAAAATGAACTTGACCCCCAATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS CCA 72 bp ATTTTGCAAGGCTTCATGGTCCTCCTGGTCTTCATCTaGTGCGTAGTTTCGGAGGAAGTTGGCAAAGGAGCC +
Preference number: 6 (lower is better)
Translates to: ILQGFMVLLVFI*CVVSEEVGKGA
Trigger: GGCTCCTTTGCCAACTTCCTCCGAAACTACGCACCAGATGAAGACCAGGAGGACCATGAAGCCTTGCAAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021231.8
CDS CAA 72 bp ACCAGCGCCTCCTTCTCCAATGAATTTGTGTGTTTCTaGGGCATAGTCCGGTTCTGGACCTCCCCTTCAGAA +
Preference number: 6 (lower is better)
Translates to: TSASFSNEFVCF*GIVRFWTSPSE
Trigger: TTCTGAAGGGGAGGTCCAGAACCGGACTATGCCCAAGAAACACACAAATTCATTGGAGAAGGAGGCGCTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS CAA 90 bp GTGGGGTCAGAAATAAACCTGATGAGTATACTGAGCAGCTGTGGGTaGACGAAGCCGAGTAGGTTCTGGATCAGGTTGAAACAGGCACTC +
Preference number: 6 (lower is better)
Translates to: VGSEINLMSILSSCG*TKPSRFWIRLKQAL
Trigger: GAGTGCCTGTTTCAACCTGATCCAGAACCTACTCGGCTTCGTCAACCCACAGCTGCTCAGTATACTCATCAGGTTTATTTCTGACCCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS CAA 90 bp TGGGGAGATGGTCTTTCTTTCCACACATTGGGGGTCAAGTTCATTTaGGTTCAGGAAATCCTGGATCCGTTTCAGAGACACGCTGGCCTG +
Preference number: 6 (lower is better)
Translates to: WGDGLSFHTLGVKFI*VQEILDPFQRHAGL
Trigger: CAGGCCAGCGTGTCTCTGAAACGGATCCAGGATTTCCTGAACCAAAATGAACTTGACCCCCAATGTGTGGAAAGAAAGACCATCTCCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS CAA 90 bp CAGTACACACTCAGCTTCACATTGCCTGTCTCTGCTATCTCCTCTTaGATTAATGCGCCAGTCTCCTTAGTCTTTGTCACCAGCGCCTCC +
Preference number: 6 (lower is better)
Translates to: QYTLSFTLPVSAISS*INAPVSLVFVTSAS
Trigger: GGAGGCGCTGGTGACAAAGACTAAGGAGACTGGCGCATTAATCAAAGAGGAGATAGCAGAGACAGGCAATGTGAAGCTGAGTGTGTACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS CAA 90 bp TTTCTGGTTGTTGTCCACCTTAGTATCACTGAGGACCTTGAAGTCTaGGATTCGGCCATAGGCCCGAATGACACTGGTGCCCGTTACTGT +
Preference number: 6 (lower is better)
Translates to: FLVVVHLSITEDLEV*DSAIGPNDTGARYC
Trigger: ACAGTAACGGGCACCAGTGTCATTCGGGCCTATGGCCGAATCCAAGACTTCAAGGTCCTCAGTGATACTAAGGTGGACAACAACCAGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS TCA 72 bp AGAGACACGCTGGCCTGGGTCAGTCCACTGATTAACTaGGGCAGCATGTTGAGGGGGATCTTTAAGATATTG +
Preference number: 6 (lower is better)
Translates to: RDTLAWVSPLIN*GSMLRGIFKIL
Trigger: CAATATCTTAAAGATCCCCCTCAACATGCTGCCTCAGTTAATCAGTGGACTGACCCAGGCCAGCGTGTCTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS GCA 72 bp AGGATCTGCCAGAGGAAGTATATTGCCAGGATGACCTaGAAAGGTGCAGACCACAGCAGATTGATGAAAGGG +
Preference number: 6 (lower is better)
Translates to: RICQRKYIARMT*KGADHSRLMKG
Trigger: CCCTTTCATCAATCTGCTGTGGTCTGCACCTTTGCAGGTCATCCTGGCAATATACTTCCTCTGGCAGATCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS GCA 72 bp GTGTCTTCGAGCAGGAGTACCTCCTCATTTGCATTTTaGAAGGCTTCATGGTCCTCCTGGTCTTCATCTGGT +
Preference number: 6 (lower is better)
Translates to: VSSSRSTSSFAF*KASWSSWSSSG
Trigger: ACCAGATGAAGACCAGGAGGACCATGAAGCCTTGCAAAATGCAAATGAGGAGGTACTCCTGCTCGAAGACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021231.8
CDS GCA 72 bp GTGTCTTCGAGCAGGAGTACCTCCTCATTTGCATTTTaGAAGGCTGCTTCATGGTCCTCCTGGTCTTCATCT +
Preference number: 6 (lower is better)
Translates to: VSSSRSTSSFAF*KAASWSSWSSS
Trigger: AGATGAAGACCAGGAGGACCATGAAGCAGCCTTGCAAAATGCAAATGAGGAGGTACTCCTGCTCGAAGACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000178136.8
CDS CAA 72 bp TCCAAGATTTTACCCTCTGCCAAAGCTGAGAGGATCTaGGAACGGAAGGGGATGATGGCACAGATCACACAC +
Preference number: 6 (lower is better)
Translates to: SKILPSAKAERI*ERKGMMAQITH
Trigger: GTGTGTGATCTGTGCCATCATCCCCTTCCGTTCCAAGATCCTCTCAGCTTTGGCAGAGGGTAAAATCTTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS CAA 72 bp TGTGTCTTCGAGCAGGAGTACCTCCTCATTTGCATTTaGCAAGGCTTCATGGTCCTCCTGGTCTTCATCTGG +
Preference number: 6 (lower is better)
Translates to: CVFEQEYLLICI*QGFMVLLVFIW
Trigger: CCAGATGAAGACCAGGAGGACCATGAAGCCTTGCAAAATGCAAATGAGGAGGTACTCCTGCTCGAAGACACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021231.8
CDS CAA 72 bp ACCCAGGGGGCCTCAGTCTTGGTCTTAGAGTACTCCTaGACTCTCTCCACAGCTATGATATTAGACTCCAAG +
Preference number: 6 (lower is better)
Translates to: TQGASVLVLEYS*TLSTAMILDSK
Trigger: CTTGGAGTCTAATATCATAGCTGTGGAGAGAGTCAAGGAGTACTCTAAGACCAAGACTGAGGCCCCCTGGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS CAA 72 bp TGTGTCTTCGAGCAGGAGTACCTCCTCATTTGCATTTaGCAAGGCTGCTTCATGGTCCTCCTGGTCTTCATC +
Preference number: 6 (lower is better)
Translates to: CVFEQEYLLICI*QGCFMVLLVFI
Trigger: GATGAAGACCAGGAGGACCATGAAGCAGCCTTGCAAAATGCAAATGAGGAGGTACTCCTGCTCGAAGACACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000178136.8
CDS TCA 72 bp CACAGAACACCAGGGCAAAGTAGATGTAGAAAGTGGTaGACCGGAACGGATCCAAGATTTTACCCTCTGCCA +
Preference number: 6 (lower is better)
Translates to: HRTPGQSRCRKW*TGTDPRFYPLP
Trigger: TGGCAGAGGGTAAAATCTTGGATCCGTTCCGGTTCACCACTTTCTACATCTACTTTGCCCTGGTGTTCTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS TCA 72 bp CTCCTTAGTCTTTGTCACCAGCGCCTCCTTCTCCAATaGATTTGTGTGTTTCTTGGGCATAGTCCGGTTCTG +
Preference number: 6 (lower is better)
Translates to: LLSLCHQRLLLQ*ICVFLGHSPVL
Trigger: CAGAACCGGACTATGCCCAAGAAACACACAAATTCATTGGAGAAGGAGGCGCTGGTGACAAAGACTAAGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS CCA 72 bp AGTGGTAATATTGGTGTAAGATCAATGTCTGCATGGTaGAGCTCAGGAACATCAGTCCGGCCAGCAAGAAGC +
Preference number: 6 (lower is better)
Translates to: SGNIGVRSMSAW*SSGTSVRPARS
Trigger: GCTTCTTGCTGGCCGGACTGATGTTCCTGAGCTCCACCATGCAGACATTGATCTTACACCAATATTACCACT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS CCA 72 bp TGCAGTGGTAATATTGGTGTAAGATCAATGTCTGCATaGTGGAGCTCAGGAACATCAGTCCGGCCAGCAAGA +
Preference number: 6 (lower is better)
Translates to: CSGNIGVRSMSA*WSSGTSVRPAR
Trigger: TCTTGCTGGCCGGACTGATGTTCCTGAGCTCCACCATGCAGACATTGATCTTACACCAATATTACCACTGCA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS CCA 72 bp CCCATAGAAGATGCCTCCGGCCGCAATGAGGTTGACTaGAGAATCAAATTCAGCTACTACTCCTTTGTCCAA +
Preference number: 6 (lower is better)
Translates to: PIEDASGRNEVD*RIKFSYYSFVQ
Trigger: TTGGACAAAGGAGTAGTAGCTGAATTTGATTCTCCAGTCAACCTCATTGCGGCCGGAGGCATCTTCTATGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS CAA 72 bp AAGGAGTTCTGGAAACAGGGTGTGAGGTCCGGAGTGTaGGTATATATAGACAGGTTGGAGTCCCAGAACTTG +
Preference number: 6 (lower is better)
Translates to: KEFWKQGVRSGV*VYIDRLESQNL
Trigger: CAAGTTCTGGGACTCCAACCTGTCTATATATACCAACACTCCGGACCTCACACCCTGTTTCCAGAACTCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS CAA 90 bp CAGGATCTCGCTCATCAGCTTGATGCGGGAGTCCTTGAACTTCATTaGCTTTACCTGGTAGGTCTTCATCTTCATGGACACAGCTCCATT +
Preference number: 6 (lower is better)
Translates to: QDLAHQLDAGVLELH*LYLVGLHLHGHSSI
Trigger: AATGGAGCTGTGTCCATGAAGATGAAGACCTACCAGGTAAAGCAAATGAAGTTCAAGGACTCCCGCATCAAGCTGATGAGCGAGATCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS CAA 72 bp GCTCATCAGCTTGATGCGGGAGTCCTTGAACTTCATTaGCTTTACCTGGTAGGTCTTCATCTTCATGGACAC +
Preference number: 6 (lower is better)
Translates to: AHQLDAGVLELH*LYLVGLHLHGH
Trigger: GTGTCCATGAAGATGAAGACCTACCAGGTAAAGCAAATGAAGTTCAAGGACTCCCGCATCAAGCTGATGAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS CAA 72 bp CTCAGCTTCACATTGCCTGTCTCTGCTATCTCCTCTTaGATTAATGCGCCAGTCTCCTTAGTCTTTGTCACC +
Preference number: 6 (lower is better)
Translates to: LSFTLPVSAISS*INAPVSLVFVT
Trigger: GGTGACAAAGACTAAGGAGACTGGCGCATTAATCAAAGAGGAGATAGCAGAGACAGGCAATGTGAAGCTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS CCA 72 bp GTCTTTCTTTCCACACATTGGGGGTCAAGTTCATTTTaGTTCAGGAAATCCTGGATCCGTTTCAGAGACACG +
Preference number: 6 (lower is better)
Translates to: VFLSTHWGSSSF*FRKSWIRFRDT
Trigger: CGTGTCTCTGAAACGGATCCAGGATTTCCTGAACCAAAATGAACTTGACCCCCAATGTGTGGAAAGAAAGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8
CDS CAA 72 bp GAAATAAACCTGATGAGTATACTGAGCAGCTGTGGGTaGACGAAGCCGAGTAGGTTCTGGATCAGGTTGAAA +
Preference number: 6 (lower is better)
Translates to: EINLMSILSSCG*TKPSRFWIRLK
Trigger: TTTCAACCTGATCCAGAACCTACTCGGCTTCGTCAACCCACAGCTGCTCAGTATACTCATCAGGTTTATTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021231.8
ENSMUST00000178136.8