RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ABCC2 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000025194

Ensembl transcript IDs: ENSMUST00000026208.6, ENSMUST00000099413.3

Found 268 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGGCCTCCTCCTTCCTCCTTGATGCTTTATTCCAGTGCACAGCTCTaGTTGGGCAGTGACGGCTCAGTAGATGTAAACTGCTCCTCTGGT +
Preference number: 1 (lower is better)
Translates to: GPPPSSLMLYSSAQL*LGSDGSVDVNCSSG
Trigger: ACCAGAGGAGCAGTTTACATCTACTGAGCCGTCACTGCCCAACCAGAGCTGTGCACTGGAATAAAGCATCAAGGAGGAAGGAGGAGGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026208.6
ENSMUST00000099413.3
3UTR TCA 90 bp AGAAGTGAAAAAGAAATTGGGCTGAGGAAGAGGGATAAAGGATGCTaGTGGCAGAGAAAGGGAGCAACCAAGATTGGCGAGGGAGGGGGA +
Preference number: 1 (lower is better)
Translates to: RSEKEIGLRKRDKGC*WQRKGATKIGEGGG
Trigger: TCCCCCTCCCTCGCCAATCTTGGTTGCTCCCTTTCTCTGCCATCAGCATCCTTTATCCCTCTTCCTCAGCCCAATTTCTTTTTCACTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000026208.6
ENSMUST00000099413.3
3UTR TCA 90 bp TTTTACAGGGTGGTTGAGACCAGAGATTGCTTGAGCCTTAGAGTTTaGGGCCAACCTGAGCAACAGCAACAAACTGTGTATCTGTGCCCC +
Preference number: 1 (lower is better)
Translates to: FYRVVETRDCLSLRV*GQPEQQQQTVYLCP
Trigger: GGGGCACAGATACACAGTTTGTTGCTGTTGCTCAGGTTGGCCTCAAACTCTAAGGCTCAAGCAATCTCTGGTCTCAACCACCCTGTAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
3UTR TCA 90 bp GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAATaGGAACCCTGCCACGCGCATCAGTGTAGACAAACTGCAAATGTA +
Preference number: 1 (lower is better)
Translates to: ERERERERERERERE*EPCHAHQCRQTANV
Trigger: TACATTTGCAGTTTGTCTACACTGATGCGCGTGGCAGGGTTCTCATTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
3UTR TCA 90 bp CAACCAAGATTGGCGAGGGAGGGGGAGCAAGAAAAAGAGCAAACCTaGGTAGCAGAGTTAAAGCCACAACATAGTTCTGACAGAGCGTTA +
Preference number: 1 (lower is better)
Translates to: QPRLAREGEQEKEQT*VAELKPQHSSDRAL
Trigger: TAACGCTCTGTCAGAACTATGTTGTGGCTTTAACTCTGCTACTCAGGTTTGCTCTTTTTCTTGCTCCCCCTCCCTCGCCAATCTTGGTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000026208.6
ENSMUST00000099413.3
3UTR GCA 90 bp AGTGCACAGCTCTGGTTGGGCAGTGACGGCTCAGTAGATGTAAACTaGTCCTCTGGTTTCCAAAGTTCTTCTTGGTTCTCCAAATGTTGT +
Preference number: 1 (lower is better)
Translates to: SAQLWLGSDGSVDVN*SSGFQSSSWFSKCC
Trigger: ACAACATTTGGAGAACCAAGAAGAACTTTGGAAACCAGAGGAGCAGTTTACATCTACTGAGCCGTCACTGCCCAACCAGAGCTGTGCACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026208.6
ENSMUST00000099413.3
3UTR TCA 90 bp AGGAATAGCGGTTATTTCTGGGAATGGTGGGGTAGCAAGAACTTATaGTCAAGGCAAGGCAACGAGGCTTCCATTTTGAGGTGTGTATGC +
Preference number: 1 (lower is better)
Translates to: RNSGYFWEWWGSKNL*SRQGNEASILRCVC
Trigger: GCATACACACCTCAAAATGGAAGCCTCGTTGCCTTGCCTTGATCATAAGTTCTTGCTACCCCACCATTCCCAGAAATAACCGCTATTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
3UTR CCA 90 bp ACGAAGTGCTGGATAGATTCAAGTCTTCATAATTACAGCCTCAAATaGAAGACTACAGTGACCCTCCAGCACAATCCAAAAGAGGAGCTG +
Preference number: 1 (lower is better)
Translates to: TKCWIDSSLHNYSLK*KTTVTLQHNPKEEL
Trigger: CAGCTCCTCTTTTGGATTGTGCTGGAGGGTCACTGTAGTCTTCCATTTGAGGCTGTAATTATGAAGACTTGAATCTATCCAGCACTTCGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026208.6
ENSMUST00000099413.3
3UTR TCA 90 bp AAATCTAAGTTCTCTAATGATAATAATACAAAGACCAGCCTGGGCTaGTTAGTTTGGGATGTAAATGGGAGGTGGATAGGGCCTCCTCCT +
Preference number: 1 (lower is better)
Translates to: KSKFSNDNNTKTSLG*LVWDVNGRWIGPPP
Trigger: AGGAGGAGGCCCTATCCACCTCCCATTTACATCCCAAACTAATCAGCCCAGGCTGGTCTTTGTATTATTATCATTAGAGAACTTAGATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026208.6
ENSMUST00000099413.3
3UTR-3UTR TCA 90 bp CAGCTCTGGTTGGGCAGTGACGGCTCAGTAGATGTAAACTGCTCCTCTGGTTTCAGACCAGAGATTGCTTaGGCCTTAGAGTTTGAGGCC +
Preference number: 2 (lower is better)
Translates to: QLWLGSDGSVDVNCSSGFRPEIA*ALEFEA
Trigger: GGCCTCAAACTCTAAGGCTCAAGCAATCTCTGGTCT...GAAACCAGAGGAGCAGTTTACATCTACTGAGCCGTCACTGCCCAACCAGAGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
3UTR-3UTR TCA 90 bp AATACCTATATAACTGTGTTGGCCACGGTTCCGGAGCTGGAAATGGAAACACTGGTGAGCCCCAGGACCTaGCTACCTCTGGCTGTCCAA +
Preference number: 2 (lower is better)
Translates to: NTYITVLATVPELEMETLVSPRT*LPLAVQ
Trigger: TTGGACAGCCAGAGGTAGTCAGGTCCTGGGGCTCAC...CAGTGTTTCCATTTCCAGCTCCGGAACCGTGGCCAACACAGTTATATAGGTATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
3UTR-3UTR TCA 90 bp CAGCTCTGGTTGGGCAGTGACGGCTCAGTAGATGTAAACTGCTCCTCTGGTTTCAGTTTGAGGCCAACCTaGGCAACAGCAACAAACTGT +
Preference number: 2 (lower is better)
Translates to: QLWLGSDGSVDVNCSSGFSLRPT*ATATNC
Trigger: ACAGTTTGTTGCTGTTGCTCAGGTTGGCCTCAAACT...GAAACCAGAGGAGCAGTTTACATCTACTGAGCCGTCACTGCCCAACCAGAGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
3UTR-3UTR TCA 90 bp CAGCTCTGGTTGGGCAGTGACGGCTCAGTAGATGTAAACTGCTCCTCTGGTTTCAATGGAAGACTACAGTaGCCCTCCAGCACAATCCAA +
Preference number: 2 (lower is better)
Translates to: QLWLGSDGSVDVNCSSGFNGRLQ*PSSTIQ
Trigger: TTGGATTGTGCTGGAGGGTCACTGTAGTCTTCCATT...GAAACCAGAGGAGCAGTTTACATCTACTGAGCCGTCACTGCCCAACCAGAGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026208.6
ENSMUST00000099413.3
3UTR-3UTR CCA 90 bp CAGCTCTGGTTGGGCAGTGACGGCTCAGTAGATGTAAACTGCTCCTCTGGTTTCCCACGGTTCCGGAGCTaGAAATGGAAACACTGTTAT +
Preference number: 2 (lower is better)
Translates to: QLWLGSDGSVDVNCSSGFPRFRS*KWKHCY
Trigger: ATAACAGTGTTTCCATTTCCAGCTCCGGAACCGTGG...GAAACCAGAGGAGCAGTTTACATCTACTGAGCCGTCACTGCCCAACCAGAGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026208.6
ENSMUST00000099413.3
3UTR-3UTR CCA 90 bp TCAAGTTCAATTCCAGGACCCACAAGGTGGCTCACAACTGCCTGTAACTCCAGTGGACCTGACTACCTCTaGCTGTCCAACACTCAAACT +
Preference number: 2 (lower is better)
Translates to: SSSIPGPTRWLTTACNSSGPDYL*LSNTQT
Trigger: AGTTTGAGTGTTGGACAGCCAGAGGTAGTCAGGTCC...ACTGGAGTTACAGGCAGTTGTGAGCCACCTTGTGGGTCCTGGAATTGAACTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
3UTR-3UTR TCA 90 bp CTATTTACAATGTATCCAATCTGCAGAGTCAGGGAAGGGAAGGTCTTCCTTAAGCCAAAAGAGGAGCTGTaGGGTTGGGGCAAAGGCAGG +
Preference number: 2 (lower is better)
Translates to: LFTMYPICRVREGKVFLKPKEEL*GWGKGR
Trigger: CCTGCCTTTGCCCCAACCTCACAGCTCCTCTTTTGG...CTTAAGGAAGACCTTCCCTTCCCTGACTCTGCAGATTGGATACATTGTAAATAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026208.6
ENSMUST00000099413.3
3UTR-3UTR CCA 90 bp AATATAGGACACCAGTTAAGAGAAAGCCAAGATAAACAAACCTGTACAGACTCCGCTAGCTCTGCTGGCTaGCTAGTGAGCCCCAGGACC +
Preference number: 2 (lower is better)
Translates to: NIGHQLRESQDKQTCTDSASSAG*LVSPRT
Trigger: GGTCCTGGGGCTCACTAGCCAGCCAGCAGAGCTAGC...GGAGTCTGTACAGGTTTGTTTATCTTGGCTTTCTCTTAACTGGTGTCCTATATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
3UTR-3UTR TCA 90 bp AATACCTATATAACTGTGTTGGCCACGGTTCCGGAGCTGGAAATGGAAACACTGGACAGGGTCTCTTCCTaGTCTGGGATTTTCCAAGCA +
Preference number: 2 (lower is better)
Translates to: NTYITVLATVPELEMETLDRVSS*SGIFQA
Trigger: TGCTTGGAAAATCCCAGATCAGGAAGAGACCCTGTC...CAGTGTTTCCATTTCCAGCTCCGGAACCGTGGCCAACACAGTTATATAGGTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
3UTR-3UTR TCA 90 bp CAGCTCTGGTTGGGCAGTGACGGCTCAGTAGATGTAAACTGCTCCTCTGGTTTCCTGATTATCCAGAAGTaGAAAAGAAATTGGGCTGAG +
Preference number: 2 (lower is better)
Translates to: QLWLGSDGSVDVNCSSGFLIIQK*KRNWAE
Trigger: CTCAGCCCAATTTCTTTTTCACTTCTGGATAATCAG...GAAACCAGAGGAGCAGTTTACATCTACTGAGCCGTCACTGCCCAACCAGAGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026208.6
ENSMUST00000099413.3
3UTR-3UTR TCA 90 bp TTGGCCACGGTTCCGGAGCTGGAAATGGAAACACTGTTATCTAATCTGGACAACTCAGTAGGGAAAGTATaGTCTGTTTGCACAGTGCTG +
Preference number: 2 (lower is better)
Translates to: LATVPELEMETLLSNLDNSVGKV*SVCTVL
Trigger: CAGCACTGTGCAAACAGATCATACTTTCCCTACTGA...GTTGTCCAGATTAGATAACAGTGTTTCCATTTCCAGCTCCGGAACCGTGGCCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
3UTR-3UTR GCA 90 bp TTGGCCACGGTTCCGGAGCTGGAAATGGAAACACTGTTATCTAATCTGGACAACATTTTGAGGTGTGTATaGAGATGTTTGTGCGTGTTG +
Preference number: 2 (lower is better)
Translates to: LATVPELEMETLLSNLDNILRCV*RCLCVL
Trigger: CAACACGCACAAACATCTGCATACACACCTCAAAAT...GTTGTCCAGATTAGATAACAGTGTTTCCATTTCCAGCTCCGGAACCGTGGCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
3UTR-3UTR CCA 90 bp AATACCTATATAACTGTGTTGGCCACGGTTCCGGAGCTGGAAATGGAAACACTGGGTTATTTCTGGGAATaGTGGGGTAGCAAGAACTTA +
Preference number: 2 (lower is better)
Translates to: NTYITVLATVPELEMETLGYFWE*WGSKNL
Trigger: TAAGTTCTTGCTACCCCACCATTCCCAGAAATAACC...CAGTGTTTCCATTTCCAGCTCCGGAACCGTGGCCAACACAGTTATATAGGTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
3UTR CAA 90 bp GGAAGGTCTTCCTTAAGGCAACAGGTTAATACCTATATAACTGTGTaGGCCACGGTTCCGGAGCTGGAAATGGAAACACTGTTATCTAAT +
Preference number: 2 (lower is better)
Translates to: GRSSLRQQVNTYITV*ATVPELEMETLLSN
Trigger: ATTAGATAACAGTGTTTCCATTTCCAGCTCCGGAACCGTGGCCAACACAGTTATATAGGTATTAACCTGTTGCCTTAAGGAAGACCTTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026208.6
ENSMUST00000099413.3
3UTR-3UTR TCA 90 bp CTATTTACAATGTATCCAATCTGCAGAGTCAGGGAAGGGAAGGTCTTCCTTAAGCCCTCTTCTGACTTCTaGGCATATGATACACATATG +
Preference number: 2 (lower is better)
Translates to: LFTMYPICRVREGKVFLKPSSDF*AYDTHM
Trigger: CATATGTGTATCATATGCTCAGAAGTCAGAAGAGGG...CTTAAGGAAGACCTTCCCTTCCCTGACTCTGCAGATTGGATACATTGTAAATAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
3UTR-3UTR TCA 90 bp CTATTTACAATGTATCCAATCTGCAGAGTCAGGGAAGGGAAGGTCTTCCTTAAGCAGGTTTCCAAACCCTaGGAGCTTAAAAATCTACCT +
Preference number: 2 (lower is better)
Translates to: LFTMYPICRVREGKVFLKQVSKP*ELKNLP
Trigger: AGGTAGATTTTTAAGCTCTCAGGGTTTGGAAACCTG...CTTAAGGAAGACCTTCCCTTCCCTGACTCTGCAGATTGGATACATTGTAAATAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
3UTR-3UTR GCA 90 bp AATATAGGACACCAGTTAAGAGAAAGCCAAGATAAACAAACCTGTACAGACTCCGTATGCAGATGTTTGTaGGTGTTGAGGCCTTTGGCT +
Preference number: 2 (lower is better)
Translates to: NIGHQLRESQDKQTCTDSVCRCL*VLRPLA
Trigger: AGCCAAAGGCCTCAACACGCACAAACATCTGCATAC...GGAGTCTGTACAGGTTTGTTTATCTTGGCTTTCTCTTAACTGGTGTCCTATATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
3UTR-3UTR CCA 90 bp CTATTTACAATGTATCCAATCTGCAGAGTCAGGGAAGGGAAGGTCTTCCTTAAGGATATCCCAGGTTGTTaGCAGAAGCCTTCACATTTT +
Preference number: 2 (lower is better)
Translates to: LFTMYPICRVREGKVFLKDIPGC*QKPSHF
Trigger: AAAATGTGAAGGCTTCTGCCAACAACCTGGGATATC...CTTAAGGAAGACCTTCCCTTCCCTGACTCTGCAGATTGGATACATTGTAAATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
3UTR-3UTR CCA 90 bp AATATAGGACACCAGTTAAGAGAAAGCCAAGATAAACAAACCTGTACAGACTCCCTCAAACTGTTATCATaGACAACTATGCCCGTACTT +
Preference number: 2 (lower is better)
Translates to: NIGHQLRESQDKQTCTDSLKLLS*TTMPVL
Trigger: AAGTACGGGCATAGTTGTCCATGATAACAGTTTGAG...GGAGTCTGTACAGGTTTGTTTATCTTGGCTTTCTCTTAACTGGTGTCCTATATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
3UTR-3UTR CAA 90 bp CAGCTCTGGTTGGGCAGTGACGGCTCAGTAGATGTAAACTGCTCCTCTGGTTTCAGGGAGCAACCAAGATaGGCGAGGGAGGGGGAGCAA +
Preference number: 3 (lower is better)
Translates to: QLWLGSDGSVDVNCSSGFREQPR*AREGEQ
Trigger: TTGCTCCCCCTCCCTCGCCAATCTTGGTTGCTCCCT...GAAACCAGAGGAGCAGTTTACATCTACTGAGCCGTCACTGCCCAACCAGAGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000026208.6
ENSMUST00000099413.3
3UTR CCA 72 bp GCAGAGGGCTCAAGTTCAATTCCAGGACCCACAAGGTaGCTCACAACTGCCTGTAACTCCAGTTCCAGGGGG +
Preference number: 3 (lower is better)
Translates to: AEGSSSIPGPTR*LTTACNSSSRG
Trigger: CCCCCTGGAACTGGAGTTACAGGCAGTTGTGAGCCACCTTGTGGGTCCTGGAATTGAACTTGAGCCCTCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
3UTR TCA 72 bp ACAGTGACCCTCCAGCACAATCCAAAAGAGGAGCTGTaGGGTTGGGGCAAAGGCAGGCAGGTTTCCAAACCC +
Preference number: 3 (lower is better)
Translates to: TVTLQHNPKEEL*GWGKGRQVSKP
Trigger: GGGTTTGGAAACCTGCCTGCCTTTGCCCCAACCTCACAGCTCCTCTTTTGGATTGTGCTGGAGGGTCACTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026208.6
ENSMUST00000099413.3
3UTR GCA 72 bp AGGCAAGGCAACGAGGCTTCCATTTTGAGGTGTGTATaGAGATGTTTGTGCGTGTTGAGGCCTTTGGCTCTG +
Preference number: 3 (lower is better)
Translates to: RQGNEASILRCV*RCLCVLRPLAL
Trigger: CAGAGCCAAAGGCCTCAACACGCACAAACATCTGCATACACACCTCAAAATGGAAGCCTCGTTGCCTTGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
3UTR CCA 72 bp CCTTCCTCCTTGATGCTTTATTCCAGTGCACAGCTCTaGTTGGGCAGTGACGGCTCAGTAGATGTAAACTGC +
Preference number: 3 (lower is better)
Translates to: PSSLMLYSSAQL*LGSDGSVDVNC
Trigger: GCAGTTTACATCTACTGAGCCGTCACTGCCCAACCAGAGCTGTGCACTGGAATAAAGCATCAAGGAGGAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026208.6
ENSMUST00000099413.3
3UTR-3UTR CAA 90 bp ATTGGCGAGGGAGGGGGAGCAAGAAAAAGAGCAAACCTGAGTAGCAGAGTTAAAAGATGTTTGTGCGTGTaGAGGCCTTTGGCTCTGTCC +
Preference number: 3 (lower is better)
Translates to: IGEGGGARKRANLSSRVKRCLCV*RPLALS
Trigger: GGACAGAGCCAAAGGCCTCAACACGCACAAACATCT...TTTAACTCTGCTACTCAGGTTTGCTCTTTTTCTTGCTCCCCCTCCCTCGCCAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
3UTR-3UTR CAA 90 bp CTATTTACAATGTATCCAATCTGCAGAGTCAGGGAAGGGAAGGTCTTCCTTAAGAGAGGAGCTGTGAGGTaGGGGCAAAGGCAGGCAGGT +
Preference number: 3 (lower is better)
Translates to: LFTMYPICRVREGKVFLKRGAVR*GQRQAG
Trigger: ACCTGCCTGCCTTTGCCCCAACCTCACAGCTCCTCT...CTTAAGGAAGACCTTCCCTTCCCTGACTCTGCAGATTGGATACATTGTAAATAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026208.6
ENSMUST00000099413.3
3UTR TCA 72 bp AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAATaGGAACCCTGCCACGCGCATCAGTGTAGACAAACT +
Preference number: 3 (lower is better)
Translates to: RERERERERERE*EPCHAHQCRQT
Trigger: AGTTTGTCTACACTGATGCGCGTGGCAGGGTTCTCATTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
3UTR GCA 72 bp CTCTGGTTGGGCAGTGACGGCTCAGTAGATGTAAACTaGTCCTCTGGTTTCCAAAGTTCTTCTTGGTTCTCC +
Preference number: 3 (lower is better)
Translates to: LWLGSDGSVDVN*SSGFQSSSWFS
Trigger: GGAGAACCAAGAAGAACTTTGGAAACCAGAGGAGCAGTTTACATCTACTGAGCCGTCACTGCCCAACCAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026208.6
ENSMUST00000099413.3
3UTR GCA 72 bp TGGAGAAATGGCACCAAGGTTAAGAGCACTTGTTCTTaGAGAGGGCTCAAGTTCAATTCCAGGACCCACAAG +
Preference number: 3 (lower is better)
Translates to: WRNGTKVKSTCS*RGLKFNSRTHK
Trigger: CTTGTGGGTCCTGGAATTGAACTTGAGCCCTCTGCAAGAACAAGTGCTCTTAACCTTGGTGCCATTTCTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
3UTR-3UTR CAA 90 bp TCAAGTTCAATTCCAGGACCCACAAGGTGGCTCACAACTGCCTGTAACTCCAGTAACGAGGCTTCCATTTaGAGGTGTGTATGCAGATGT +
Preference number: 3 (lower is better)
Translates to: SSSIPGPTRWLTTACNSSNEASI*RCVCRC
Trigger: ACATCTGCATACACACCTCAAAATGGAAGCCTCGTT...ACTGGAGTTACAGGCAGTTGTGAGCCACCTTGTGGGTCCTGGAATTGAACTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
3UTR CCA 72 bp TTAGTCCCAAGAGGCCTGGGTGATATCCCAGGTTGTTaGCAGAAGCCTTCACATTTTCTCTTAGGACGAATT +
Preference number: 3 (lower is better)
Translates to: LVPRGLGDIPGC*QKPSHFLLGRI
Trigger: AATTCGTCCTAAGAGAAAATGTGAAGGCTTCTGCCAACAACCTGGGATATCACCCAGGCCTCTTGGGACTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
3UTR CCA 72 bp GCCACAAAAACCCATGTCCAGTGCTACCTATTTAAGTaGGGACTCTCCCTGAGACTTGTAAGTCACAAACCA +
Preference number: 3 (lower is better)
Translates to: ATKTHVQCYLFK*GLSLRLVSHKP
Trigger: TGGTTTGTGACTTACAAGTCTCAGGGAGAGTCCCCACTTAAATAGGTAGCACTGGACATGGGTTTTTGTGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
3UTR TCA 72 bp GTCTTCATAATTACAGCCTCAAATGGAAGACTACAGTaGCCCTCCAGCACAATCCAAAAGAGGAGCTGTGAG +
Preference number: 3 (lower is better)
Translates to: VFIITASNGRLQ*PSSTIQKRSCE
Trigger: CTCACAGCTCCTCTTTTGGATTGTGCTGGAGGGTCACTGTAGTCTTCCATTTGAGGCTGTAATTATGAAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026208.6
ENSMUST00000099413.3
3UTR GCA 72 bp GCCACTAATTGTGAACTATTTACAATGTATCCAATCTaGAGAGTCAGGGAAGGGAAGGTCTTCCTTAAGGCA +
Preference number: 3 (lower is better)
Translates to: ATNCELFTMYPI*RVREGKVFLKA
Trigger: TGCCTTAAGGAAGACCTTCCCTTCCCTGACTCTGCAGATTGGATACATTGTAAATAGTTCACAATTAGTGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026208.6
ENSMUST00000099413.3
3UTR-3UTR CAA 90 bp CTCAAATGTACCAGAAACTCACAAATAGATACTGACCCTCCTAAGAAACTGAGGGAAAGTATGATCTGTTaGCACAGTGCTGTGCTACTG +
Preference number: 3 (lower is better)
Translates to: LKCTRNSQIDTDPPKKLRESMIC*HSAVLL
Trigger: CAGTAGCACAGCACTGTGCAAACAGATCATACTTTC...CCTCAGTTTCTTAGGAGGGTCAGTATCTATTTGTGAGTTTCTGGTACATTTGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
3UTR TCA 72 bp TTCTCTAATGATAATAATACAAAGACCAGCCTGGGCTaGTTAGTTTGGGATGTAAATGGGAGGTGGATAGGG +
Preference number: 3 (lower is better)
Translates to: FSNDNNTKTSLG*LVWDVNGRWIG
Trigger: CCCTATCCACCTCCCATTTACATCCCAAACTAATCAGCCCAGGCTGGTCTTTGTATTATTATCATTAGAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026208.6
ENSMUST00000099413.3
3UTR GCA 72 bp TACTCTCTCCCTCTGAGAACCTCACTAAATACGAAGTaGTGGATAGATTCAAGTCTTCATAATTACAGCCTC +
Preference number: 3 (lower is better)
Translates to: YSLPLRTSLNTK*WIDSSLHNYSL
Trigger: GAGGCTGTAATTATGAAGACTTGAATCTATCCAGCACTTCGTATTTAGTGAGGTTCTCAGAGGGAGAGAGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026208.6
ENSMUST00000099413.3
CDS-3UTR TCA 90 bp CAGCTCTGGTTGGGCAGTGACGGCTCAGTAGATGTAAACTGCTCCTCTGGTTTCGCTGGCCTGGATGACTaGAGAGATCACCATGGGAAG +
Preference number: 4 (lower is better)
Translates to: QLWLGSDGSVDVNCSSGFAGLDD*RDHHGK
Trigger: CTTCCCATGGTGATCTCTTCAGTCATCCAGGCCAGC...GAAACCAGAGGAGCAGTTTACATCTACTGAGCCGTCACTGCCCAACCAGAGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS-3UTR GCA 90 bp CAGGACCTGACTACCTCTGGCTGTCCAACACTCAAACTGTTATCATGGACAACTTTCCAGCTCCGGTCCTaGCCACCACACCGACCTTCT +
Preference number: 4 (lower is better)
Translates to: QDLTTSGCPTLKLLSWTTFQLRS*PPHRPS
Trigger: AGAAGGTCGGTGTGGTGGGCAGGACCGGAGCTGGAA...AGTTGTCCATGATAACAGTTTGAGTGTTGGACAGCCAGAGGTAGTCAGGTCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS-3UTR GCA 90 bp TTGGCCACGGTTCCGGAGCTGGAAATGGAAACACTGTTATCTAATCTGGACAACCCCAGGCATAGGAGCTaGCTCTGCCCTATGCTCAGG +
Preference number: 4 (lower is better)
Translates to: LATVPELEMETLLSNLDNPRHRS*LCPMLR
Trigger: CCTGAGCATAGGGCAGAGGCAGCTCCTATGCCTGGG...GTTGTCCAGATTAGATAACAGTGTTTCCATTTCCAGCTCCGGAACCGTGGCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS-3UTR GCA 90 bp ATAACTGTGTTGGCCACGGTTCCGGAGCTGGAAATGGAAACACTGTTATCTAATGTGCCCTCAGGGCTCTaGTGGGACTTCTTCAGCCGC +
Preference number: 4 (lower is better)
Translates to: ITVLATVPELEMETLLSNVPSGL*WDFFSR
Trigger: GCGGCTGAAGAAGTCCCAGCAGAGCCCTGAGGGCAC...ATTAGATAACAGTGTTTCCATTTCCAGCTCCGGAACCGTGGCCAACACAGTTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS-3UTR TCA 90 bp TTGGCCACGGTTCCGGAGCTGGAAATGGAAACACTGTTATCTAATCTGGACAACATGTGTTTTCCCACGTaGGTGTCCACAGCCGACAGG +
Preference number: 4 (lower is better)
Translates to: LATVPELEMETLLSNLDNMCFPT*VSTADR
Trigger: CCTGTCGGCTGTGGACACTCACGTGGGAAAACACAT...GTTGTCCAGATTAGATAACAGTGTTTCCATTTCCAGCTCCGGAACCGTGGCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS-3UTR TCA 90 bp CAGCTCTGGTTGGGCAGTGACGGCTCAGTAGATGTAAACTGCTCCTCTGGTTTCGGCCCACAACCTTGTTaGAAATGTGTTTTCCCACGT +
Preference number: 4 (lower is better)
Translates to: QLWLGSDGSVDVNCSSGFGPQPC*KCVFPR
Trigger: ACGTGGGAAAACACATTTTCAACAAGGTTGTGGGCC...GAAACCAGAGGAGCAGTTTACATCTACTGAGCCGTCACTGCCCAACCAGAGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS-3UTR TCA 90 bp CAGCTCTGGTTGGGCAGTGACGGCTCAGTAGATGTAAACTGCTCCTCTGGTTTCACTTGGGGAAGGAAGTaGATGCCATGTGTAACCAAG +
Preference number: 4 (lower is better)
Translates to: QLWLGSDGSVDVNCSSGFTWGRK*MPCVTK
Trigger: CTTGGTTACACATGGCATTCACTTCCTTCCCCAAGT...GAAACCAGAGGAGCAGTTTACATCTACTGAGCCGTCACTGCCCAACCAGAGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS-3UTR TCA 90 bp ATGTTTGTGCGTGTTGAGGCCTTTGGCTCTGTCCACCTAGGGGTTTTGTTGTTGGCAGTTTGTGAGGGATaGTTTTCCAGCTCCGGTCCT +
Preference number: 4 (lower is better)
Translates to: MFVRVEAFGSVHLGVLLLAVCEG*FSSSGP
Trigger: AGGACCGGAGCTGGAAAATCATCCCTCACAAACTGC...CAACAACAAAACCCCTAGGTGGACAGAGCCAAAGGCCTCAACACGCACAAACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS-3UTR GCA 90 bp CAGCTCTGGTTGGGCAGTGACGGCTCAGTAGATGTAAACTGCTCCTCTGGTTTCTTGGACTTGCTATCCTaGAGGAGTGCTCGTATCAGA +
Preference number: 4 (lower is better)
Translates to: QLWLGSDGSVDVNCSSGFLDLLS*RSARIR
Trigger: TCTGATACGAGCACTCCTGCAGGATAGCAAGTCCAA...GAAACCAGAGGAGCAGTTTACATCTACTGAGCCGTCACTGCCCAACCAGAGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS-3UTR GCA 90 bp ATTGGCGAGGGAGGGGGAGCAAGAAAAAGAGCAAACCTGAGTAGCAGAGTTAAAGGTGTGCAGCCTGTGTaGGATAGTGATGACCGTGCA +
Preference number: 4 (lower is better)
Translates to: IGEGGGARKRANLSSRVKGVQPV*DSDDRA
Trigger: TGCACGGTCATCACTATCGCACACAGGCTGCACACC...TTTAACTCTGCTACTCAGGTTTGCTCTTTTTCTTGCTCCCCCTCCCTCGCCAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
3UTR CAA 72 bp TCCTCCTTGATGCTTTATTCCAGTGCACAGCTCTGGTaGGGCAGTGACGGCTCAGTAGATGTAAACTGCTCC +
Preference number: 4 (lower is better)
Translates to: SSLMLYSSAQLW*GSDGSVDVNCS
Trigger: GGAGCAGTTTACATCTACTGAGCCGTCACTGCCCAACCAGAGCTGTGCACTGGAATAAAGCATCAAGGAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026208.6
ENSMUST00000099413.3
CDS-3UTR GCA 90 bp GATTCAAGTCTTCATAATTACAGCCTCAAATGGAAGACTACAGTGACCCTCCAGTCAATCCGTGTGACGTaGCCTCAGGGCTCTGCTGGG +
Preference number: 4 (lower is better)
Translates to: DSSLHNYSLKWKTTVTLQSIRVT*PQGSAG
Trigger: CCCAGCAGAGCCCTGAGGGCACGTCACACGGATTGA...CTGGAGGGTCACTGTAGTCTTCCATTTGAGGCTGTAATTATGAAGACTTGAATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS-3UTR GCA 90 bp ATAACTGTGTTGGCCACGGTTCCGGAGCTGGAAATGGAAACACTGTTATCTAATTCCCAGAGCCTACAGTaGCCACCACAGCCACCAGTT +
Preference number: 4 (lower is better)
Translates to: ITVLATVPELEMETLLSNSQSLQ*PPQPPV
Trigger: AACTGGTGGCTGTGGTGGGCACTGTAGGCTCTGGGA...ATTAGATAACAGTGTTTCCATTTCCAGCTCCGGAACCGTGGCCAACACAGTTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS-3UTR GCA 90 bp ATTGGCGAGGGAGGGGGAGCAAGAAAAAGAGCAAACCTGAGTAGCAGAGTTAAATGGAGCAACCCAAGTTaGAGGCCAGCCACAAAGGAT +
Preference number: 4 (lower is better)
Translates to: IGEGGGARKRANLSSRVKWSNPS*RPATKD
Trigger: ATCCTTTGTGGCTGGCCTGCAACTTGGGTTGCTCCA...TTTAACTCTGCTACTCAGGTTTGCTCTTTTTCTTGCTCCCCCTCCCTCGCCAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS-3UTR CCA 90 bp AATACCTATATAACTGTGTTGGCCACGGTTCCGGAGCTGGAAATGGAAACACTGTCACCATGGGAAGCATaGCCAGAGGAAAGCGCAGGA +
Preference number: 4 (lower is better)
Translates to: NTYITVLATVPELEMETLSPWEA*PEESAG
Trigger: TCCTGCGCTTTCCTCTGGCCATGCTTCCCATGGTGA...CAGTGTTTCCATTTCCAGCTCCGGAACCGTGGCCAACACAGTTATATAGGTATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS-3UTR CCA 90 bp ATTGGCGAGGGAGGGGGAGCAAGAAAAAGAGCAAACCTGAGTAGCAGAGTTAAATCACATCTTGGATTGTaGCTTCCAAGTCCCGGTCCC +
Preference number: 4 (lower is better)
Translates to: IGEGGGARKRANLSSRVKSHLGL*LPSPGP
Trigger: GGGACCGGGACTTGGAAGCCACAATCCAAGATGTGA...TTTAACTCTGCTACTCAGGTTTGCTCTTTTTCTTGCTCCCCCTCCCTCGCCAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS-3UTR CCA 90 bp TTGGCCACGGTTCCGGAGCTGGAAATGGAAACACTGTTATCTAATCTGGACAACCCCTCTGTCACTTCATaGAGCAACCCAAGTTGCAGG +
Preference number: 4 (lower is better)
Translates to: LATVPELEMETLLSNLDNPSVTS*SNPSCR
Trigger: CCTGCAACTTGGGTTGCTCCATGAAGTGACAGAGGG...GTTGTCCAGATTAGATAACAGTGTTTCCATTTCCAGCTCCGGAACCGTGGCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS-3UTR CCA 90 bp CAGGACCTGACTACCTCTGGCTGTCCAACACTCAAACTGTTATCATGGACAACTCCAGGACCAGGATTTTaGATTTTCGAAGCACGGCCC +
Preference number: 4 (lower is better)
Translates to: QDLTTSGCPTLKLLSWTTPGPGF*IFEARP
Trigger: GGGCCGTGCTTCGAAAATCCAAAATCCTGGTCCTGG...AGTTGTCCATGATAACAGTTTGAGTGTTGGACAGCCAGAGGTAGTCAGGTCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS-3UTR TCA 90 bp CAGGACCTGACTACCTCTGGCTGTCCAACACTCAAACTGTTATCATGGACAACTGCTTCTGACCGCCACTaGGATTTATACCCTTCTCTC +
Preference number: 4 (lower is better)
Translates to: QDLTTSGCPTLKLLSWTTASDRH*DLYPSL
Trigger: GAGAGAAGGGTATAAATCTCAGTGGCGGTCAGAAGC...AGTTGTCCATGATAACAGTTTGAGTGTTGGACAGCCAGAGGTAGTCAGGTCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS-3UTR TCA 90 bp CAGGACCTGACTACCTCTGGCTGTCCAACACTCAAACTGTTATCATGGACAACTCAGCCACAAAGGATTTaGGATGAGCCAATTCCAGGG +
Preference number: 4 (lower is better)
Translates to: QDLTTSGCPTLKLLSWTTQPQRI*DEPIPG
Trigger: CCCTGGAATTGGCTCATCTCAAATCCTTTGTGGCTG...AGTTGTCCATGATAACAGTTTGAGTGTTGGACAGCCAGAGGTAGTCAGGTCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS-3UTR TCA 90 bp ATTGGCGAGGGAGGGGGAGCAAGAAAAAGAGCAAACCTGAGTAGCAGAGTTAAAGGATGGTCGTCTGAATaGGGCTATCCGTCTCTAGAT +
Preference number: 4 (lower is better)
Translates to: IGEGGGARKRANLSSRVKGWSSE*GYPSLD
Trigger: ATCTAGAGACGGATAGCCTCATTCAGACGACCATCC...TTTAACTCTGCTACTCAGGTTTGCTCTTTTTCTTGCTCCCCCTCCCTCGCCAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS-3UTR CCA 90 bp ATTGGCGAGGGAGGGGGAGCAAGAAAAAGAGCAAACCTGAGTAGCAGAGTTAAACAGGACGCCATTAACTaGGACCAGGAGAACCATAAG +
Preference number: 4 (lower is better)
Translates to: IGEGGGARKRANLSSRVKQDAIN*DQENHK
Trigger: CTTATGGTTCTCCTGGTCCCAGTTAATGGCGTCCTG...TTTAACTCTGCTACTCAGGTTTGCTCTTTTTCTTGCTCCCCCTCCCTCGCCAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS-3UTR CCA 90 bp CAGGACCTGACTACCTCTGGCTGTCCAACACTCAAACTGTTATCATGGACAACTCTGAAGAGATCACCATaGGAAGCATGGCCAGAGGAA +
Preference number: 4 (lower is better)
Translates to: QDLTTSGCPTLKLLSWTTLKRSP*EAWPEE
Trigger: TTCCTCTGGCCATGCTTCCCATGGTGATCTCTTCAG...AGTTGTCCATGATAACAGTTTGAGTGTTGGACAGCCAGAGGTAGTCAGGTCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS-3UTR CCA 90 bp ATGTTTGTGCGTGTTGAGGCCTTTGGCTCTGTCCACCTAGGGGTTTTGTTGTTGTCAAAATGGCAGACATaGCGAATGGCAGACAAGTCC +
Preference number: 4 (lower is better)
Translates to: MFVRVEAFGSVHLGVLLLSKWQT*RMADKS
Trigger: GGACTTGTCTGCCATTCGCCATGTCTGCCATTTTGA...CAACAACAAAACCCCTAGGTGGACAGAGCCAAAGGCCTCAACACGCACAAACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS-3UTR CCA 90 bp ATGTTTGTGCGTGTTGAGGCCTTTGGCTCTGTCCACCTAGGGGTTTTGTTGTTGTCCAGGTTCACATCTTaGATTGTGGCTTCCAAGTCC +
Preference number: 4 (lower is better)
Translates to: MFVRVEAFGSVHLGVLLLSRFTS*IVASKS
Trigger: GGACTTGGAAGCCACAATCCAAGATGTGAACCTGGA...CAACAACAAAACCCCTAGGTGGACAGAGCCAAAGGCCTCAACACGCACAAACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS-3UTR CCA 90 bp TTGGCCACGGTTCCGGAGCTGGAAATGGAAACACTGTTATCTAATCTGGACAACAGCCACCAGTTGGCCTaGTTTTATGTCCAGGTTCAC +
Preference number: 4 (lower is better)
Translates to: LATVPELEMETLLSNLDNSHQLA*FYVQVH
Trigger: GTGAACCTGGACATAAAACCAGGCCAACTGGTGGCT...GTTGTCCAGATTAGATAACAGTGTTTCCATTTCCAGCTCCGGAACCGTGGCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS-3UTR CCA 90 bp CTCAAATGTACCAGAAACTCACAAATAGATACTGACCCTCCTAAGAAACTGAGGGATCCACTGCGGCTGTaGCTTCGTCCAGGACCAGGA +
Preference number: 4 (lower is better)
Translates to: LKCTRNSQIDTDPPKKLRDPLRL*LRPGPG
Trigger: TCCTGGTCCTGGACGAAGCCACAGCCGCAGTGGATC...CCTCAGTTTCTTAGGAGGGTCAGTATCTATTTGTGAGTTTCTGGTACATTTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS-3UTR TCA 90 bp CAGCTCTGGTTGGGCAGTGACGGCTCAGTAGATGTAAACTGCTCCTCTGGTTTCAAACTTGCTGGTGAGTaGCTTGGCTTTAAGATTTTC +
Preference number: 4 (lower is better)
Translates to: QLWLGSDGSVDVNCSSGFKLAGE*LGFKIF
Trigger: GAAAATCTTAAAGCCAAGTCACTCACCAGCAAGTTT...GAAACCAGAGGAGCAGTTTACATCTACTGAGCCGTCACTGCCCAACCAGAGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS-3UTR TCA 90 bp CTCAAATGTACCAGAAACTCACAAATAGATACTGACCCTCCTAAGAAACTGAGGTTCTTCAGCCGCCTCTaGAGAGCCTGCCTGGCTTTC +
Preference number: 4 (lower is better)
Translates to: LKCTRNSQIDTDPPKKLRFFSRL*RACLAF
Trigger: GAAAGCCAGGCAGGCTCTTCAGAGGCGGCTGAAGAA...CCTCAGTTTCTTAGGAGGGTCAGTATCTATTTGTGAGTTTCTGGTACATTTGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS-3UTR TCA 90 bp CAGCTCTGGTTGGGCAGTGACGGCTCAGTAGATGTAAACTGCTCCTCTGGTTTCCTTTTCATCGTATTCTaGCCCAAACAGGATGTTATC +
Preference number: 4 (lower is better)
Translates to: QLWLGSDGSVDVNCSSGFLFIVF*PKQDVI
Trigger: GATAACATCCTGTTTGGGTCAGAATACGATGAAAAG...GAAACCAGAGGAGCAGTTTACATCTACTGAGCCGTCACTGCCCAACCAGAGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS-3UTR TCA 90 bp CAGGACCTGACTACCTCTGGCTGTCCAACACTCAAACTGTTATCATGGACAACTATTCTCATGTCCCTCTaGGAAGGTGAATTGTCGGTC +
Preference number: 4 (lower is better)
Translates to: QDLTTSGCPTLKLLSWTTILMSL*EGELSV
Trigger: GACCGACAATTCACCTTCTCAGAGGGACATGAGAAT...AGTTGTCCATGATAACAGTTTGAGTGTTGGACAGCCAGAGGTAGTCAGGTCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS-3UTR TCA 90 bp CAGCTCTGGTTGGGCAGTGACGGCTCAGTAGATGTAAACTGCTCCTCTGGTTTCTTGAAAGGCTACTTTTaGAATGGCCAGGTAAATGAG +
Preference number: 4 (lower is better)
Translates to: QLWLGSDGSVDVNCSSGFLKGYF*NGQVNE
Trigger: CTCATTTACCTGGCCATTTCAAAAGTAGCCTTTCAA...GAAACCAGAGGAGCAGTTTACATCTACTGAGCCGTCACTGCCCAACCAGAGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099413.3
CDS-3UTR GCA 90 bp TCAAGTTCAATTCCAGGACCCACAAGGTGGCTCACAACTGCCTGTAACTCCAGTACACCAGGAGCCAAGTaGATAGGTAGAGAATTGGAT +
Preference number: 4 (lower is better)
Translates to: SSSIPGPTRWLTTACNSSTPGAK*IGRELD
Trigger: ATCCAATTCTCTACCTATGCACTTGGCTCCTGGTGT...ACTGGAGTTACAGGCAGTTGTGAGCCACCTTGTGGGTCCTGGAATTGAACTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS-3UTR GCA 90 bp CAGGACCTGACTACCTCTGGCTGTCCAACACTCAAACTGTTATCATGGACAACTCCTTCTCTAAGATGGTaGCTTTCCCCAGAACGACAA +
Preference number: 4 (lower is better)
Translates to: QDLTTSGCPTLKLLSWTTPSLRW*LSPERQ
Trigger: TTGTCGTTCTGGGGAAAGGCACCATCTTAGAGAAGG...AGTTGTCCATGATAACAGTTTGAGTGTTGGACAGCCAGAGGTAGTCAGGTCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS-3UTR CCA 90 bp TTGGCCACGGTTCCGGAGCTGGAAATGGAAACACTGTTATCTAATCTGGACAACGCTAGAAATCTCTGCTaGTGCTCAAAGGCCCGAATA +
Preference number: 4 (lower is better)
Translates to: LATVPELEMETLLSNLDNARNLC*CSKARI
Trigger: TATTCGGGCCTTTGAGCACCAGCAGAGATTTCTAGC...GTTGTCCAGATTAGATAACAGTGTTTCCATTTCCAGCTCCGGAACCGTGGCCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS-3UTR CCA 90 bp TCTCCCCAGCTCAGTTGTGGATTTTCTAAGGTACCTGATACTATTTATTTAAGTCCAGCTCCAGGCGAATaGCAAGCCACCGGTTGGAGG +
Preference number: 4 (lower is better)
Translates to: SPQLSCGFSKVPDTIYLSPAPGE*QATGWR
Trigger: CCTCCAACCGGTGGCTTGCCATTCGCCTGGAGCTGG...ACTTAAATAAATAGTATCAGGTACCTTAGAAAATCCACAACTGAGCTGGGGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS-3UTR CCA 90 bp TTGGCCACGGTTCCGGAGCTGGAAATGGAAACACTGTTATCTAATCTGGACAACCAACAGCCACGATGTTaGTCTCTACTTCTGACGTCA +
Preference number: 4 (lower is better)
Translates to: LATVPELEMETLLSNLDNQQPRC*SLLLTS
Trigger: TGACGTCAGAAGTAGAGACCAACATCGTGGCTGTTG...GTTGTCCAGATTAGATAACAGTGTTTCCATTTCCAGCTCCGGAACCGTGGCCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS-3UTR CCA 90 bp TTGGCCACGGTTCCGGAGCTGGAAATGGAAACACTGTTATCTAATCTGGACAACCCATCAATGATGATCTaGCCACCTGCAGACTCTAAG +
Preference number: 4 (lower is better)
Translates to: LATVPELEMETLLSNLDNPSMMI*PPADSK
Trigger: CTTAGAGTCTGCAGGTGGCCAGATCATCATTGATGG...GTTGTCCAGATTAGATAACAGTGTTTCCATTTCCAGCTCCGGAACCGTGGCCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS-3UTR CCA 90 bp TTGGCCACGGTTCCGGAGCTGGAAATGGAAACACTGTTATCTAATCTGGACAACAGAAGGGACCCATATTaGACAGCAGTTCTTCAGGAC +
Preference number: 4 (lower is better)
Translates to: LATVPELEMETLLSNLDNRRDPY*TAVLQD
Trigger: GTCCTGAAGAACTGCTGTCCAATATGGGTCCCTTCT...GTTGTCCAGATTAGATAACAGTGTTTCCATTTCCAGCTCCGGAACCGTGGCCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS-3UTR TCA 90 bp CTATTTACAATGTATCCAATCTGCAGAGTCAGGGAAGGGAAGGTCTTCCTTAAGGTCCCTCTGAGAAGGTaGATTGTCGGTCCCATTCTG +
Preference number: 4 (lower is better)
Translates to: LFTMYPICRVREGKVFLKVPLRR*IVGPIL
Trigger: CAGAATGGGACCGACAATTCACCTTCTCAGAGGGAC...CTTAAGGAAGACCTTCCCTTCCCTGACTCTGCAGATTGGATACATTGTAAATAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS-3UTR GCA 90 bp AATACCTATATAACTGTGTTGGCCACGGTTCCGGAGCTGGAAATGGAAACACTGAAAATCAAAATCGTCTaGAGCTGGCTGAAGCGCAGC +
Preference number: 4 (lower is better)
Translates to: NTYITVLATVPELEMETLKIKIV*SWLKRS
Trigger: GCTGCGCTTCAGCCAGCTGCAGACGATTTTGATTTT...CAGTGTTTCCATTTCCAGCTCCGGAACCGTGGCCAACACAGTTATATAGGTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS-3UTR GCA 90 bp ATTGGCGAGGGAGGGGGAGCAAGAAAAAGAGCAAACCTGAGTAGCAGAGTTAAACCCTTGATGGTGATATaGCCATGGACATTCTCCATT +
Preference number: 4 (lower is better)
Translates to: IGEGGGARKRANLSSRVKPLMVI*PWTFSI
Trigger: AATGGAGAATGTCCATGGGCATATCACCATCAAGGG...TTTAACTCTGCTACTCAGGTTTGCTCTTTTTCTTGCTCCCCCTCCCTCGCCAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS-3UTR CCA 90 bp CTATTTACAATGTATCCAATCTGCAGAGTCAGGGAAGGGAAGGTCTTCCTTAAGCATTGCCTGCAGTGTTaGATCACCAACACCAGGAGC +
Preference number: 4 (lower is better)
Translates to: LFTMYPICRVREGKVFLKHCLQC*ITNTRS
Trigger: GCTCCTGGTGTTGGTGATCCAACACTGCAGGCAATG...CTTAAGGAAGACCTTCCCTTCCCTGACTCTGCAGATTGGATACATTGTAAATAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS-3UTR CCA 90 bp GATTCAAGTCTTCATAATTACAGCCTCAAATGGAAGACTACAGTGACCCTCCAGCAACATTTCCAAGTCTaGGAGGAGAGCGCACGCTTC +
Preference number: 4 (lower is better)
Translates to: DSSLHNYSLKWKTTVTLQQHFQV*EESARF
Trigger: GAAGCGTGCGCTCTCCTCCCAGACTTGGAAATGTTG...CTGGAGGGTCACTGTAGTCTTCCATTTGAGGCTGTAATTATGAAGACTTGAATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS-3UTR CCA 90 bp AATACCTATATAACTGTGTTGGCCACGGTTCCGGAGCTGGAAATGGAAACACTGGTTTTTCAGAGTCACTaGTCCAAGCACTCAGCCAGA +
Preference number: 4 (lower is better)
Translates to: NTYITVLATVPELEMETLVFQSH*SKHSAR
Trigger: TCTGGCTGAGTGCTTGGACCAGTGACTCTGAAAAAC...CAGTGTTTCCATTTCCAGCTCCGGAACCGTGGCCAACACAGTTATATAGGTATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS-3UTR CCA 90 bp TCAAGTTCAATTCCAGGACCCACAAGGTGGCTCACAACTGCCTGTAACTCCAGTGAAAAGACGCATTTCTaGTTGGTGTCAATCTGCTTC +
Preference number: 4 (lower is better)
Translates to: SSSIPGPTRWLTTACNSSEKTHF*LVSICF
Trigger: GAAGCAGATTGACACCAACCAGAAATGCGTCTTTTC...ACTGGAGTTACAGGCAGTTGTGAGCCACCTTGTGGGTCCTGGAATTGAACTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS-3UTR CCA 90 bp AATACCTATATAACTGTGTTGGCCACGGTTCCGGAGCTGGAAATGGAAACACTGAACAAAATGGGGTCCTaGGGAATGATGGTCAGTCTC +
Preference number: 4 (lower is better)
Translates to: NTYITVLATVPELEMETLNKMGS*GMMVSL
Trigger: GAGACTGACCATCATTCCCCAGGACCCCATTTTGTT...CAGTGTTTCCATTTCCAGCTCCGGAACCGTGGCCAACACAGTTATATAGGTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
3UTR CAA 72 bp TCAGTCACCTCTGTCAGTAGGGAAAGTATGATCTGTTaGCACAGTGCTGTGCTACTGAAGAGCAGAGAGAGA +
Preference number: 4 (lower is better)
Translates to: SVTSVSRESMIC*HSAVLLKSRER
Trigger: TCTCTCTCTGCTCTTCAGTAGCACAGCACTGTGCAAACAGATCATACTTTCCCTACTGACAGAGGTGACTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS-3UTR TCA 90 bp ATTGGCGAGGGAGGGGGAGCAAGAAAAAGAGCAAACCTGAGTAGCAGAGTTAAAGGAAGAAAGACTGGATaGGAGTCACAGAGAACATTA +
Preference number: 4 (lower is better)
Translates to: IGEGGGARKRANLSSRVKGRKTG*ESQRTL
Trigger: TAATGTTCTCTGTGACTCTCATCCAGTCTTTCTTCC...TTTAACTCTGCTACTCAGGTTTGCTCTTTTTCTTGCTCCCCCTCCCTCGCCAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS-3UTR GCA 90 bp ATAACTGTGTTGGCCACGGTTCCGGAGCTGGAAATGGAAACACTGTTATCTAATCCTTCAGGTCCCGAATaGTTCATGAATGTCTTCCAG +
Preference number: 4 (lower is better)
Translates to: ITVLATVPELEMETLLSNPSGPE*FMNVFQ
Trigger: CTGGAAGACATTCATGAAGCATTCGGGACCTGAAGG...ATTAGATAACAGTGTTTCCATTTCCAGCTCCGGAACCGTGGCCAACACAGTTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS-3UTR GCA 90 bp ATAACTGTGTTGGCCACGGTTCCGGAGCTGGAAATGGAAACACTGTTATCTAATTTTGCTAGAAATCTCTaGTGGTGCTCAAAGGCCCGA +
Preference number: 4 (lower is better)
Translates to: ITVLATVPELEMETLLSNFARNL*WCSKAR
Trigger: TCGGGCCTTTGAGCACCAGCAGAGATTTCTAGCAAA...ATTAGATAACAGTGTTTCCATTTCCAGCTCCGGAACCGTGGCCAACACAGTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS-3UTR CCA 90 bp TTGGCCACGGTTCCGGAGCTGGAAATGGAAACACTGTTATCTAATCTGGACAACGCCTGTGCAAAGTTTTaGATGCATTTCTGCAAGCAT +
Preference number: 4 (lower is better)
Translates to: LATVPELEMETLLSNLDNACAKF*MHFCKH
Trigger: ATGCTTGCAGAAATGCATCCAAAACTTTGCACAGGC...GTTGTCCAGATTAGATAACAGTGTTTCCATTTCCAGCTCCGGAACCGTGGCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS-3UTR CCA 90 bp CTCAAATGTACCAGAAACTCACAAATAGATACTGACCCTCCTAAGAAACTGAGGCAATGCCGGCTTCCTTaGCCATCAAGTAGAAGGGAC +
Preference number: 4 (lower is better)
Translates to: LKCTRNSQIDTDPPKKLRQCRLP*PSSRRD
Trigger: GTCCCTTCTACTTGATGGCCAAGGAAGCCGGCATTG...CCTCAGTTTCTTAGGAGGGTCAGTATCTATTTGTGAGTTTCTGGTACATTTGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
3UTR CAA 72 bp TCCTTAAGGCAACAGGTTAATACCTATATAACTGTGTaGGCCACGGTTCCGGAGCTGGAAATGGAAACACTG +
Preference number: 4 (lower is better)
Translates to: SLRQQVNTYITV*ATVPELEMETL
Trigger: CAGTGTTTCCATTTCCAGCTCCGGAACCGTGGCCAACACAGTTATATAGGTATTAACCTGTTGCCTTAAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026208.6
ENSMUST00000099413.3
CDS-3UTR TCA 90 bp GATTCAAGTCTTCATAATTACAGCCTCAAATGGAAGACTACAGTGACCCTCCAGAGGACATCTTGGCTCTaGCTCTGCTTCTTGGTCAAT +
Preference number: 4 (lower is better)
Translates to: DSSLHNYSLKWKTTVTLQRTSWL*LCFLVN
Trigger: ATTGACCAAGAAGCAGAGTCAGAGCCAAGATGTCCT...CTGGAGGGTCACTGTAGTCTTCCATTTGAGGCTGTAATTATGAAGACTTGAATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS-3UTR TCA 90 bp CTCAAATGTACCAGAAACTCACAAATAGATACTGACCCTCCTAAGAAACTGAGGCCACGTAGAACGTTTTaGAGAGAGCCTTCACCAACC +
Preference number: 4 (lower is better)
Translates to: LKCTRNSQIDTDPPKKLRPRRTF*REPSPT
Trigger: GGTTGGTGAAGGCTCTCTTCAAAACGTTCTACGTGG...CCTCAGTTTCTTAGGAGGGTCAGTATCTATTTGTGAGTTTCTGGTACATTTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS-3UTR TCA 90 bp TCAAGTTCAATTCCAGGACCCACAAGGTGGCTCACAACTGCCTGTAACTCCAGTAGAAATTTCAGCAGCTaGGGATTCAGAAACAAAAGA +
Preference number: 4 (lower is better)
Translates to: SSSIPGPTRWLTTACNSSRNFSS*GFRNKR
Trigger: TCTTTTGTTTCTGAATCCTCAGCTGCTGAAATTTCT...ACTGGAGTTACAGGCAGTTGTGAGCCACCTTGTGGGTCCTGGAATTGAACTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS-3UTR TCA 90 bp ATAACTGTGTTGGCCACGGTTCCGGAGCTGGAAATGGAAACACTGTTATCTAATCTTTCACGAAGCCAATaGGAAATTTCAGCAGCTGAG +
Preference number: 4 (lower is better)
Translates to: ITVLATVPELEMETLLSNLSRSQ*EISAAE
Trigger: CTCAGCTGCTGAAATTTCTCATTGGCTTCGTGAAAG...ATTAGATAACAGTGTTTCCATTTCCAGCTCCGGAACCGTGGCCAACACAGTTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS-3UTR TCA 90 bp ATGTTTGTGCGTGTTGAGGCCTTTGGCTCTGTCCACCTAGGGGTTTTGTTGTTGTTCATATTCTGGACCTaGATTTTCCTGATCTTGGTA +
Preference number: 4 (lower is better)
Translates to: MFVRVEAFGSVHLGVLLLFIFWT*IFLILV
Trigger: TACCAAGATCAGGAAAATTCAGGTCCAGAATATGAA...CAACAACAAAACCCCTAGGTGGACAGAGCCAAAGGCCTCAACACGCACAAACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS-3UTR TCA 90 bp AATATAGGACACCAGTTAAGAGAAAGCCAAGATAAACAAACCTGTACAGACTCCTCTTGTCACTGTCCATaGTGGTGTGCAGCCTGTGTG +
Preference number: 4 (lower is better)
Translates to: NIGHQLRESQDKQTCTDSSCHCP*WCAACV
Trigger: CACACAGGCTGCACACCATCATGGACAGTGACAAGA...GGAGTCTGTACAGGTTTGTTTATCTTGGCTTTCTCTTAACTGGTGTCCTATATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS-3UTR GCA 90 bp AATACCTATATAACTGTGTTGGCCACGGTTCCGGAGCTGGAAATGGAAACACTGCGAATGCTGTTCACTTaGTCTTTAAAGGAAGGTTCC +
Preference number: 4 (lower is better)
Translates to: NTYITVLATVPELEMETLRMLFT*SLKEGS
Trigger: GGAACCTTCCTTTAAAGAGCAAGTGAACAGCATTCG...CAGTGTTTCCATTTCCAGCTCCGGAACCGTGGCCAACACAGTTATATAGGTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS-3UTR GCA 90 bp TACCTATATAACTGTGTTGGCCACGGTTCCGGAGCTGGAAATGGAAACACTGTTTGGTTGGTGTCAATCTaGTTCTCACTGTTTGCTAGA +
Preference number: 4 (lower is better)
Translates to: YLYNCVGHGSGAGNGNTVWLVSI*FSLFAR
Trigger: TCTAGCAAACAGTGAGAAGCAGATTGACACCAACCA...AACAGTGTTTCCATTTCCAGCTCCGGAACCGTGGCCAACACAGTTATATAGGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS-3UTR GCA 90 bp AATACCTATATAACTGTGTTGGCCACGGTTCCGGAGCTGGAAATGGAAACACTGCGTATTCAACAATCTTaGCGCTGTCTAGGACCATTA +
Preference number: 4 (lower is better)
Translates to: NTYITVLATVPELEMETLRIQQS*RCLGPL
Trigger: TAATGGTCCTAGACAGCGGCAAGATTGTTGAATACG...CAGTGTTTCCATTTCCAGCTCCGGAACCGTGGCCAACACAGTTATATAGGTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS-3UTR CCA 90 bp TTGGCCACGGTTCCGGAGCTGGAAATGGAAACACTGTTATCTAATCTGGACAACAGAGAATCCAGAACATaGACAGGAACCAAGAATTCT +
Preference number: 4 (lower is better)
Translates to: LATVPELEMETLLSNLDNRESRT*TGTKNS
Trigger: AGAATTCTTGGTTCCTGTCCATGTTCTGGATTCTCT...GTTGTCCAGATTAGATAACAGTGTTTCCATTTCCAGCTCCGGAACCGTGGCCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS-3UTR CCA 90 bp ATTGGCGAGGGAGGGGGAGCAAGAAAAAGAGCAAACCTGAGTAGCAGAGTTAAAATTTGGGAAAGTCTTTaGTGGCCTCAGACTTCTTTT +
Preference number: 4 (lower is better)
Translates to: IGEGGGARKRANLSSRVKIWESL*WPQTSF
Trigger: AAAAGAAGTCTGAGGCCACCAAAGACTTTCCCAAAT...TTTAACTCTGCTACTCAGGTTTGCTCTTTTTCTTGCTCCCCCTCCCTCGCCAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS-3UTR TCA 90 bp AATATAGGACACCAGTTAAGAGAAAGCCAAGATAAACAAACCTGTACAGACTCCAGCGCAGCAAGTTCCTaGGTTCTTTCTTCCGAATGC +
Preference number: 4 (lower is better)
Translates to: NIGHQLRESQDKQTCTDSSAASS*VLSSEC
Trigger: GCATTCGGAAGAAAGAACTCAGGAACTTGCTGCGCT...GGAGTCTGTACAGGTTTGTTTATCTTGGCTTTCTCTTAACTGGTGTCCTATATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS-3UTR TCA 90 bp AATATAGGACACCAGTTAAGAGAAAGCCAAGATAAACAAACCTGTACAGACTCCTTCTCCCAGCATGGCTaGTATCAAAGAGGACTTCCC +
Preference number: 4 (lower is better)
Translates to: NIGHQLRESQDKQTCTDSFSQHG*YQRGLP
Trigger: GGGAAGTCCTCTTTGATATCAGCCATGCTGGGAGAA...GGAGTCTGTACAGGTTTGTTTATCTTGGCTTTCTCTTAACTGGTGTCCTATATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS-3UTR TCA 90 bp TACCTATATAACTGTGTTGGCCACGGTTCCGGAGCTGGAAATGGAAACACTGTTGCACTTGATAGTTGTTaGACTGGATCTCACCTTTTT +
Preference number: 4 (lower is better)
Translates to: YLYNCVGHGSGAGNGNTVALDSC*TGSHLF
Trigger: AAAAAGGTGAGATCCAGTTCAACAACTATCAAGTGC...AACAGTGTTTCCATTTCCAGCTCCGGAACCGTGGCCAACACAGTTATATAGGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS-3UTR TCA 90 bp GATTCAAGTCTTCATAATTACAGCCTCAAATGGAAGACTACAGTGACCCTCCAGCATCCGAGTATTTGTTaGAAGGGTCGAGATTCATCC +
Preference number: 4 (lower is better)
Translates to: DSSLHNYSLKWKTTVTLQHPSIC*KGRDSS
Trigger: GGATGAATCTCGACCCTTTCAACAAATACTCGGATG...CTGGAGGGTCACTGTAGTCTTCCATTTGAGGCTGTAATTATGAAGACTTGAATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS-3UTR CCA 90 bp CTCAAATGTACCAGAAACTCACAAATAGATACTGACCCTCCTAAGAAACTGAGGTCACCAACCAGGATTTaGGAAAGTCTTTGGTGGCCT +
Preference number: 4 (lower is better)
Translates to: LKCTRNSQIDTDPPKKLRSPTRI*ESLWWP
Trigger: AGGCCACCAAAGACTTTCCCAAATCCTGGTTGGTGA...CCTCAGTTTCTTAGGAGGGTCAGTATCTATTTGTGAGTTTCTGGTACATTTGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS-3UTR CCA 90 bp CTCAAATGTACCAGAAACTCACAAATAGATACTGACCCTCCTAAGAAACTGAGGATCCCTTCTCTAAGATaGTGCCTTTCCCCAGAACGA +
Preference number: 4 (lower is better)
Translates to: LKCTRNSQIDTDPPKKLRIPSLR*CLSPER
Trigger: TCGTTCTGGGGAAAGGCACCATCTTAGAGAAGGGAT...CCTCAGTTTCTTAGGAGGGTCAGTATCTATTTGTGAGTTTCTGGTACATTTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS-3UTR CCA 90 bp GATTCAAGTCTTCATAATTACAGCCTCAAATGGAAGACTACAGTGACCCTCCAGAGACGCATTTCTGGTTaGTGTCAATCTGCTTCTCAC +
Preference number: 4 (lower is better)
Translates to: DSSLHNYSLKWKTTVTLQRRISG*CQSASH
Trigger: GTGAGAAGCAGATTGACACCAACCAGAAATGCGTCT...CTGGAGGGTCACTGTAGTCTTCCATTTGAGGCTGTAATTATGAAGACTTGAATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS-3UTR TCA 90 bp AATATAGGACACCAGTTAAGAGAAAGCCAAGATAAACAAACCTGTACAGACTCCCGTAAACAGAAAATGTaGTCACGGACACCAGGGTTG +
Preference number: 4 (lower is better)
Translates to: NIGHQLRESQDKQTCTDSRKQKM*SRTPGL
Trigger: CAACCCTGGTGTCCGTGATCACATTTTCTGTTTACG...GGAGTCTGTACAGGTTTGTTTATCTTGGCTTTCTCTTAACTGGTGTCCTATATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS-3UTR TCA 90 bp TCTCCCCAGCTCAGTTGTGGATTTTCTAAGGTACCTGATACTATTTATTTAAGTACAAAGGATTTGAGATaGGCCAATTCCAGGGCCCTC +
Preference number: 4 (lower is better)
Translates to: SPQLSCGFSKVPDTIYLSTKDLR*ANSRAL
Trigger: GAGGGCCCTGGAATTGGCTCATCTCAAATCCTTTGT...ACTTAAATAAATAGTATCAGGTACCTTAGAAAATCCACAACTGAGCTGGGGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS-3UTR GCA 90 bp CTATTTACAATGTATCCAATCTGCAGAGTCAGGGAAGGGAAGGTCTTCCTTAAGGAGGCTTCTGAGAACTaGACAGCTTTATCAAAATGG +
Preference number: 4 (lower is better)
Translates to: LFTMYPICRVREGKVFLKEASEN*TALSKW
Trigger: CCATTTTGATAAAGCTGTGCAGTTCTCAGAAGCCTC...CTTAAGGAAGACCTTCCCTTCCCTGACTCTGCAGATTGGATACATTGTAAATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS-3UTR CCA 90 bp CAGGACCTGACTACCTCTGGCTGTCCAACACTCAAACTGTTATCATGGACAACTCAAATCTCTTGGTCCTaGATCTGTATATTCTGTAAA +
Preference number: 4 (lower is better)
Translates to: QDLTTSGCPTLKLLSWTTQISWS*ICIFCK
Trigger: TTTACAGAATATACAGATCCAGGACCAAGAGATTTG...AGTTGTCCATGATAACAGTTTGAGTGTTGGACAGCCAGAGGTAGTCAGGTCCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS-3UTR CCA 90 bp AATATAGGACACCAGTTAAGAGAAAGCCAAGATAAACAAACCTGTACAGACTCCTGTTCTCCCTTCTCATaGTCAAGGAAGCTGCATCGT +
Preference number: 4 (lower is better)
Translates to: NIGHQLRESQDKQTCTDSCSPFS*SRKLHR
Trigger: ACGATGCAGCTTCCTTGACCATGAGAAGGGAGAACA...GGAGTCTGTACAGGTTTGTTTATCTTGGCTTTCTCTTAACTGGTGTCCTATATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS-3UTR TCA 90 bp GATTCAAGTCTTCATAATTACAGCCTCAAATGGAAGACTACAGTGACCCTCCAGGATAACCCTGAGTCTTaGAAGGCTACTTTTGAAATG +
Preference number: 4 (lower is better)
Translates to: DSSLHNYSLKWKTTVTLQDNPES*KATFEM
Trigger: CATTTCAAAAGTAGCCTTTCAAGACTCAGGGTTATC...CTGGAGGGTCACTGTAGTCTTCCATTTGAGGCTGTAATTATGAAGACTTGAATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099413.3
CDS-3UTR CCA 90 bp CTCAAATGTACCAGAAACTCACAAATAGATACTGACCCTCCTAAGAAACTGAGGTGGGAAAGTCTTTGGTaGCCTCAGACTTCTTTTTCT +
Preference number: 4 (lower is better)
Translates to: LKCTRNSQIDTDPPKKLRWESLW*PQTSFS
Trigger: AGAAAAAGAAGTCTGAGGCCACCAAAGACTTTCCCA...CCTCAGTTTCTTAGGAGGGTCAGTATCTATTTGTGAGTTTCTGGTACATTTGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS-3UTR TCA 90 bp CTCAAATGTACCAGAAACTCACAAATAGATACTGACCCTCCTAAGAAACTGAGGCTGAAAGGATCAAAATaGCAATCTGGAAACCATAGG +
Preference number: 4 (lower is better)
Translates to: LKCTRNSQIDTDPPKKLRLKGSK*QSGNHR
Trigger: CCTATGGTTTCCAGATTGTCATTTTGATCCTTTCAG...CCTCAGTTTCTTAGGAGGGTCAGTATCTATTTGTGAGTTTCTGGTACATTTGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS-3UTR TCA 90 bp CTATTTACAATGTATCCAATCTGCAGAGTCAGGGAAGGGAAGGTCTTCCTTAAGGAGTTAGGTGTAAGATaGAAATCAAAATCGTCTGCA +
Preference number: 4 (lower is better)
Translates to: LFTMYPICRVREGKVFLKELGVR*KSKSSA
Trigger: TGCAGACGATTTTGATTTTCATCTTACACCTAACTC...CTTAAGGAAGACCTTCCCTTCCCTGACTCTGCAGATTGGATACATTGTAAATAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS-3UTR GCA 90 bp TCTCCCCAGCTCAGTTGTGGATTTTCTAAGGTACCTGATACTATTTATTTAAGTTTCTGTATACAGCATTaGCTGCAGTGTTGGATCACC +
Preference number: 4 (lower is better)
Translates to: SPQLSCGFSKVPDTIYLSFCIQH*LQCWIT
Trigger: GGTGATCCAACACTGCAGGCAATGCTGTATACAGAA...ACTTAAATAAATAGTATCAGGTACCTTAGAAAATCCACAACTGAGCTGGGGAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS-3UTR GCA 90 bp CTATTTACAATGTATCCAATCTGCAGAGTCAGGGAAGGGAAGGTCTTCCTTAAGCAAAAATATACCTTGTaGTATTCCCAGAGCTCCAAA +
Preference number: 4 (lower is better)
Translates to: LFTMYPICRVREGKVFLKQKYTL*YSQSSK
Trigger: TTTGGAGCTCTGGGAATAGCACAAGGTATATTTTTG...CTTAAGGAAGACCTTCCCTTCCCTGACTCTGCAGATTGGATACATTGTAAATAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS-3UTR GCA 90 bp CTCAAATGTACCAGAAACTCACAAATAGATACTGACCCTCCTAAGAAACTGAGGGTTAACAGCTGCCTGTaGAAAGTTTTGGATGCATTT +
Preference number: 4 (lower is better)
Translates to: LKCTRNSQIDTDPPKKLRVNSCL*KVLDAF
Trigger: AAATGCATCCAAAACTTTGCACAGGCAGCTGTTAAC...CCTCAGTTTCTTAGGAGGGTCAGTATCTATTTGTGAGTTTCTGGTACATTTGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
3UTR CAA 72 bp GAGAAAGCCAAGATAAACAAACCTGTACAGACTCCTTaGATAACCCTGAGTCTTGAAAGGCTACTTTTGAAA +
Preference number: 4 (lower is better)
Translates to: EKAKINKPVQTP*ITLSLERLLLK
Trigger: TTTCAAAAGTAGCCTTTCAAGACTCAGGGTTATCAAAGGAGTCTGTACAGGTTTGTTTATCTTGGCTTTCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS-3UTR GCA 90 bp TCTCCCCAGCTCAGTTGTGGATTTTCTAAGGTACCTGATACTATTTATTTAAGTGTGCAAAGTTTTGGATaGATTTCTGCAAGCATATAT +
Preference number: 4 (lower is better)
Translates to: SPQLSCGFSKVPDTIYLSVQSFG*ISASIY
Trigger: ATATATGCTTGCAGAAATGCATCCAAAACTTTGCAC...ACTTAAATAAATAGTATCAGGTACCTTAGAAAATCCACAACTGAGCTGGGGAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS TCA 90 bp TGTGACGTGCCCTCAGGGCTCTGCTGGGACTTCTTCAGCCGCCTCTaGAGAGCCTGCCTGGCTTTCTGCAGGTCCTTTGTCATGATCGTC +
Preference number: 5 (lower is better)
Translates to: CDVPSGLCWDFFSRL*RACLAFCRSFVMIV
Trigger: GACGATCATGACAAAGGACCTGCAGAAAGCCAGGCAGGCTCTTCAGAGGCGGCTGAAGAAGTCCCAGCAGAGCCCTGAGGGCACGTCACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS TCA 90 bp GACAAGGACATCTTGGCTCTGACTCTGCTTCTTGGTCAATCCGTGTaGCGTGCCCTCAGGGCTCTGCTGGGACTTCTTCAGCCGCCTCTG +
Preference number: 5 (lower is better)
Translates to: DKDILALTLLLGQSV*RALRALLGLLQPPL
Trigger: CAGAGGCGGCTGAAGAAGTCCCAGCAGAGCCCTGAGGGCACGTCACACGGATTGACCAAGAAGCAGAGTCAGAGCCAAGATGTCCTTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS TCA 90 bp CAGGTACTGCTCCAGCCGGTCTACAGAGACGCTGGCCTGGATGACTaGAGAGATCACCATGGGAAGCATGGCCAGAGGAAAGCGCAGGAT +
Preference number: 5 (lower is better)
Translates to: QVLLQPVYRDAGLDD*RDHHGKHGQRKAQD
Trigger: ATCCTGCGCTTTCCTCTGGCCATGCTTCCCATGGTGATCTCTTCAGTCATCCAGGCCAGCGTCTCTGTAGACCGGCTGGAGCAGTACCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS TCA 90 bp TTCCCAGGTACTGCTCCAGCCGGTCTACAGAGACGCTGGCCTGGATaGCTGAAGAGATCACCATGGGAAGCATGGCCAGAGGAAAGCGCA +
Preference number: 5 (lower is better)
Translates to: FPGTAPAGLQRRWPG*LKRSPWEAWPEESA
Trigger: TGCGCTTTCCTCTGGCCATGCTTCCCATGGTGATCTCTTCAGTCATCCAGGCCAGCGTCTCTGTAGACCGGCTGGAGCAGTACCTGGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS GCA 90 bp GGACATCTTGGCTCTGACTCTGCTTCTTGGTCAATCCGTGTGACGTaGCCTCAGGGCTCTGCTGGGACTTCTTCAGCCGCCTCTGAAGAG +
Preference number: 5 (lower is better)
Translates to: GHLGSDSASWSIRVT*PQGSAGTSSAASEE
Trigger: CTCTTCAGAGGCGGCTGAAGAAGTCCCAGCAGAGCCCTGAGGGCACGTCACACGGATTGACCAAGAAGCAGAGTCAGAGCCAAGATGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS GCA 90 bp TTGGATTTTCGAAGCACGGCCCTACCCAGGCATAGGAGCTGCCTCTaGCCTATGCTCAGGTTGTCACCGCCCTCTGTCACTTCATGGAGC +
Preference number: 5 (lower is better)
Translates to: LDFRSTALPRHRSCL*PMLRLSPPSVTSWS
Trigger: GCTCCATGAAGTGACAGAGGGCGGTGACAACCTGAGCATAGGGCAGAGGCAGCTCCTATGCCTGGGTAGGGCCGTGCTTCGAAAATCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS GCA 90 bp ACATGGCGAATGGCAGACAAGTCCAGATCATCGCTTCCCAGGTACTaGTCCAGCCGGTCTACAGAGACGCTGGCCTGGATGACTGAAGAG +
Preference number: 5 (lower is better)
Translates to: TWRMADKSRSSLPRY*SSRSTETLAWMTEE
Trigger: CTCTTCAGTCATCCAGGCCAGCGTCTCTGTAGACCGGCTGGAGCAGTACCTGGGAAGCGATGATCTGGACTTGTCTGCCATTCGCCATGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS TCA 90 bp ATAGTGATGACCGTGCACTGGGAGAACTCGTTCCGGATGGTCGTCTaGATGAGGCTATCCGTCTCTAGATCCACTGCGGCTGTGGCTTCG +
Preference number: 5 (lower is better)
Translates to: IVMTVHWENSFRMVV*MRLSVSRSTAAVAS
Trigger: CGAAGCCACAGCCGCAGTGGATCTAGAGACGGATAGCCTCATTCAGACGACCATCCGGAACGAGTTCTCCCAGTGCACGGTCATCACTAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS GCA 90 bp AGGATTTTGGATTTTCGAAGCACGGCCCTACCCAGGCATAGGAGCTaGCTCTGCCCTATGCTCAGGTTGTCACCGCCCTCTGTCACTTCA +
Preference number: 5 (lower is better)
Translates to: RILDFRSTALPRHRS*LCPMLRLSPPSVTS
Trigger: TGAAGTGACAGAGGGCGGTGACAACCTGAGCATAGGGCAGAGGCAGCTCCTATGCCTGGGTAGGGCCGTGCTTCGAAAATCCAAAATCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS CCA 90 bp TCGAGTCTTCCAGGACAAGGACATCTTGGCTCTGACTCTGCTTCTTaGTCAATCCGTGTGACGTGCCCTCAGGGCTCTGCTGGGACTTCT +
Preference number: 5 (lower is better)
Translates to: SSLPGQGHLGSDSAS*SIRVTCPQGSAGTS
Trigger: AGAAGTCCCAGCAGAGCCCTGAGGGCACGTCACACGGATTGACCAAGAAGCAGAGTCAGAGCCAAGATGTCCTTGTCCTGGAAGACTCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS GCA 90 bp CAGTGTTCGGCGAAGGCTGTTCTCCCTTCTCATGGTCAAGGAAGCTaGATCGTCAGGAATTTCCTCCACAGTTGGGATCAGCCCACAGTC +
Preference number: 5 (lower is better)
Translates to: QCSAKAVLPSHGQGS*IVRNFLHSWDQPTV
Trigger: GACTGTGGGCTGATCCCAACTGTGGAGGAAATTCCTGACGATGCAGCTTCCTTGACCATGAGAAGGGAGAACAGCCTTCGCCGAACACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS CCA 90 bp GGACTTCCCAGAGCCTACAGTGCCCACCACAGCCACCAGTTGGCCTaGTTTTATGTCCAGGTTCACATCTTGGATTGTGGCTTCCAAGTC +
Preference number: 5 (lower is better)
Translates to: GLPRAYSAHHSHQLA*FYVQVHILDCGFQV
Trigger: GACTTGGAAGCCACAATCCAAGATGTGAACCTGGACATAAAACCAGGCCAACTGGTGGCTGTGGTGGGCACTGTAGGCTCTGGGAAGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS-3UTR CAA 90 bp CAGCTCTGGTTGGGCAGTGACGGCTCAGTAGATGTAAACTGCTCCTCTGGTTTCCACCACAGCCACCAGTaGGCCTGGTTTTATGTCCAG +
Preference number: 5 (lower is better)
Translates to: QLWLGSDGSVDVNCSSGFHHSHQ*AWFYVQ
Trigger: CTGGACATAAAACCAGGCCAACTGGTGGCTGTGGTG...GAAACCAGAGGAGCAGTTTACATCTACTGAGCCGTCACTGCCCAACCAGAGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS-3UTR CAA 90 bp CAGCTCTGGTTGGGCAGTGACGGCTCAGTAGATGTAAACTGCTCCTCTGGTTTCTGGATCTCACCTTTTTaGGGCCAATCTGCCGGAGGC +
Preference number: 5 (lower is better)
Translates to: QLWLGSDGSVDVNCSSGFWISPF*GQSAGG
Trigger: GCCTCCGGCAGATTGGCCCAAAAAAGGTGAGATCCA...GAAACCAGAGGAGCAGTTTACATCTACTGAGCCGTCACTGCCCAACCAGAGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS TCA 90 bp GTGCCTTTCCCCAGAACGACAATCTCATCCACTTGGGGAAGGAAGTaGATGCCATGTGTAACCAAGATCCGAGTCTTGCCGCTCAGCAGG +
Preference number: 5 (lower is better)
Translates to: VPFPRTTISSTWGRK*MPCVTKIRVLPLSR
Trigger: CCTGCTGAGCGGCAAGACTCGGATCTTGGTTACACATGGCATTCACTTCCTTCCCCAAGTGGATGAGATTGTCGTTCTGGGGAAAGGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS-3UTR CAA 90 bp CAGCTCTGGTTGGGCAGTGACGGCTCAGTAGATGTAAACTGCTCCTCTGGTTTCGGAAAGCGCAGGATATaGAAGAGGGTGATGGAGGTG +
Preference number: 5 (lower is better)
Translates to: QLWLGSDGSVDVNCSSGFGKRRI*KRVMEV
Trigger: CACCTCCATCACCCTCTTCAATATCCTGCGCTTTCC...GAAACCAGAGGAGCAGTTTACATCTACTGAGCCGTCACTGCCCAACCAGAGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS-3UTR CAA 90 bp CAGCTCTGGTTGGGCAGTGACGGCTCAGTAGATGTAAACTGCTCCTCTGGTTTCATGGCAAGCCACCGGTaGGAGGTAATCCAGGAAAAG +
Preference number: 5 (lower is better)
Translates to: QLWLGSDGSVDVNCSSGFMASHR*EVIQEK
Trigger: CTTTTCCTGGATTACCTCCAACCGGTGGCTTGCCAT...GAAACCAGAGGAGCAGTTTACATCTACTGAGCCGTCACTGCCCAACCAGAGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS CCA 90 bp ACCACAGCCACCAGTTGGCCTGGTTTTATGTCCAGGTTCACATCTTaGATTGTGGCTTCCAAGTCCCGGTCCCAAGTAAAAGAGGCTTCT +
Preference number: 5 (lower is better)
Translates to: TTATSWPGFMSRFTS*IVASKSRSQVKEAS
Trigger: AGAAGCCTCTTTTACTTGGGACCGGGACTTGGAAGCCACAATCCAAGATGTGAACCTGGACATAAAACCAGGCCAACTGGTGGCTGTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS TCA 90 bp TTTTTCTTCTTTTTCGAGTCTTCCAGGACAAGGACATCTTGGCTCTaGCTCTGCTTCTTGGTCAATCCGTGTGACGTGCCCTCAGGGCTC +
Preference number: 5 (lower is better)
Translates to: FFFFFESSRTRTSWL*LCFLVNPCDVPSGL
Trigger: GAGCCCTGAGGGCACGTCACACGGATTGACCAAGAAGCAGAGTCAGAGCCAAGATGTCCTTGTCCTGGAAGACTCGAAAAAGAAGAAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS GCA 90 bp GTGGCTTCCAAGTCCCGGTCCCAAGTAAAAGAGGCTTCTGAGAACTaGACAGCTTTATCAAAATGGCAGACATGGCGAATGGCAGACAAG +
Preference number: 5 (lower is better)
Translates to: VASKSRSQVKEASEN*TALSKWQTWRMADK
Trigger: CTTGTCTGCCATTCGCCATGTCTGCCATTTTGATAAAGCTGTGCAGTTCTCAGAAGCCTCTTTTACTTGGGACCGGGACTTGGAAGCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS CCA 90 bp TTTCAATGCCGGCTTCCTTGGCCATCAAGTAGAAGGGACCCATATTaGACAGCAGTTCTTCAGGACTGCCGTATTCAACAATCTTGCCGC +
Preference number: 5 (lower is better)
Translates to: FQCRLPWPSSRRDPY*TAVLQDCRIQQSCR
Trigger: GCGGCAAGATTGTTGAATACGGCAGTCCTGAAGAACTGCTGTCCAATATGGGTCCCTTCTACTTGATGGCCAAGGAAGCCGGCATTGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS TCA 90 bp TGTGCTATTCCCAGAGCTCCAAAGACCCCGATTCTCATGTCCCTCTaGGAAGGTGAATTGTCGGTCCCATTCTGTTTTTCAGAGTCACTG +
Preference number: 5 (lower is better)
Translates to: CAIPRAPKTPILMSL*EGELSVPFCFSESL
Trigger: CAGTGACTCTGAAAAACAGAATGGGACCGACAATTCACCTTCTCAGAGGGACATGAGAATCGGGGTCTTTGGAGCTCTGGGAATAGCACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS CCA 90 bp AAAGAGGCTTCTGAGAACTGCACAGCTTTATCAAAATGGCAGACATaGCGAATGGCAGACAAGTCCAGATCATCGCTTCCCAGGTACTGC +
Preference number: 5 (lower is better)
Translates to: KEASENCTALSKWQT*RMADKSRSSLPRYC
Trigger: GCAGTACCTGGGAAGCGATGATCTGGACTTGTCTGCCATTCGCCATGTCTGCCATTTTGATAAAGCTGTGCAGTTCTCAGAAGCCTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS CCA 90 bp CTCCTTTCTTGTCCATCAGGTCACTATAGGATCCCTTCTCTAAGATaGTGCCTTTCCCCAGAACGACAATCTCATCCACTTGGGGAAGGA +
Preference number: 5 (lower is better)
Translates to: LLSCPSGHYRIPSLR*CLSPERQSHPLGEG
Trigger: TCCTTCCCCAAGTGGATGAGATTGTCGTTCTGGGGAAAGGCACCATCTTAGAGAAGGGATCCTATAGTGACCTGATGGACAAGAAAGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS-3UTR CAA 90 bp CAGCTCTGGTTGGGCAGTGACGGCTCAGTAGATGTAAACTGCTCCTCTGGTTTCCCACACAAGAACAGTTaGTTCAAAACAAAGAGGCAG +
Preference number: 5 (lower is better)
Translates to: QLWLGSDGSVDVNCSSGFPHKNS*FKTKRQ
Trigger: CTGCCTCTTTGTTTTGAACAAACTGTTCTTGTGTGG...GAAACCAGAGGAGCAGTTTACATCTACTGAGCCGTCACTGCCCAACCAGAGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS-3UTR CAA 90 bp TTGGCCACGGTTCCGGAGCTGGAAATGGAAACACTGTTATCTAATCTGGACAACGTCCAGGTTCACATCTaGGATTGTGGCTTCCAAGTC +
Preference number: 5 (lower is better)
Translates to: LATVPELEMETLLSNLDNVQVHI*DCGFQV
Trigger: GACTTGGAAGCCACAATCCAAGATGTGAACCTGGAC...GTTGTCCAGATTAGATAACAGTGTTTCCATTTCCAGCTCCGGAACCGTGGCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS-3UTR CAA 90 bp ATTGGCGAGGGAGGGGGAGCAAGAAAAAGAGCAAACCTGAGTAGCAGAGTTAAAGACAATCTCATCCACTaGGGGAAGGAAGTGAATGCC +
Preference number: 5 (lower is better)
Translates to: IGEGGGARKRANLSSRVKDNLIH*GKEVNA
Trigger: GGCATTCACTTCCTTCCCCAAGTGGATGAGATTGTC...TTTAACTCTGCTACTCAGGTTTGCTCTTTTTCTTGCTCCCCCTCCCTCGCCAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS-3UTR CAA 90 bp TTGGCCACGGTTCCGGAGCTGGAAATGGAAACACTGTTATCTAATCTGGACAACTCAACAGCCACGATGTaGGTCTCTACTTCTGACGTC +
Preference number: 5 (lower is better)
Translates to: LATVPELEMETLLSNLDNSTATM*VSTSDV
Trigger: GACGTCAGAAGTAGAGACCAACATCGTGGCTGTTGA...GTTGTCCAGATTAGATAACAGTGTTTCCATTTCCAGCTCCGGAACCGTGGCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS GCA 90 bp GACACCAGGGTTGGAGTTAGGTGTAAGATGAAAATCAAAATCGTCTaGAGCTGGCTGAAGCGCAGCAAGTTCCTGAGTTCTTTCTTCCGA +
Preference number: 5 (lower is better)
Translates to: DTRVGVRCKMKIKIV*SWLKRSKFLSSFFR
Trigger: TCGGAAGAAAGAACTCAGGAACTTGCTGCGCTTCAGCCAGCTGCAGACGATTTTGATTTTCATCTTACACCTAACTCCAACCCTGGTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS GCA 90 bp CTTTCTTGTCCATCAGGTCACTATAGGATCCCTTCTCTAAGATGGTaGCTTTCCCCAGAACGACAATCTCATCCACTTGGGGAAGGAAGT +
Preference number: 5 (lower is better)
Translates to: LSCPSGHYRIPSLRW*LSPERQSHPLGEGS
Trigger: ACTTCCTTCCCCAAGTGGATGAGATTGTCGTTCTGGGGAAAGGCACCATCTTAGAGAAGGGATCCTATAGTGACCTGATGGACAAGAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS GCA 90 bp TCCTCACTGTCGTTATCGACTGTAGCCTCTCCTTCAGGTCCCGAATaGTTCATGAATGTCTTCCAGTTCTTAGCGAACACTCCTTTCTTG +
Preference number: 5 (lower is better)
Translates to: SSLSLSTVASPSGPE*FMNVFQFLANTPFL
Trigger: CAAGAAAGGAGTGTTCGCTAAGAACTGGAAGACATTCATGAAGCATTCGGGACCTGAAGGAGAGGCTACAGTCGATAACGACAGTGAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS GCA 90 bp TTCTGGTTGGTGTCAATCTGCTTCTCACTGTTTGCTAGAAATCTCTaGTGGTGCTCAAAGGCCCGAATAACAGGCAAACCAGAGACAGTC +
Preference number: 5 (lower is better)
Translates to: FWLVSICFSLFARNL*WCSKARITGKPETV
Trigger: GACTGTCTCTGGTTTGCCTGTTATTCGGGCCTTTGAGCACCAGCAGAGATTTCTAGCAAACAGTGAGAAGCAGATTGACACCAACCAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS CCA 90 bp TCTGGAAACCATAGGAGACGAAGAACAGGCAGGAATAGGTCATGTTaGACTTGCTATCCTGCAGGAGTGCTCGTATCAGAGTCTGAAACT +
Preference number: 5 (lower is better)
Translates to: SGNHRRRRTGRNRSC*TCYPAGVLVSESET
Trigger: AGTTTCAGACTCTGATACGAGCACTCCTGCAGGATAGCAAGTCCAACATGACCTATTCCTGCCTGTTCTTCGTCTCCTATGGTTTCCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS CCA 90 bp TCCCAAGTAAAAGAGGCTTCTGAGAACTGCACAGCTTTATCAAAATaGCAGACATGGCGAATGGCAGACAAGTCCAGATCATCGCTTCCC +
Preference number: 5 (lower is better)
Translates to: SQVKEASENCTALSK*QTWRMADKSRSSLP
Trigger: GGGAAGCGATGATCTGGACTTGTCTGCCATTCGCCATGTCTGCCATTTTGATAAAGCTGTGCAGTTCTCAGAAGCCTCTTTTACTTGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS CCA 90 bp TGGTTGGTGTCAATCTGCTTCTCACTGTTTGCTAGAAATCTCTGCTaGTGCTCAAAGGCCCGAATAACAGGCAAACCAGAGACAGTCTCA +
Preference number: 5 (lower is better)
Translates to: WLVSICFSLFARNLC*CSKARITGKPETVS
Trigger: TGAGACTGTCTCTGGTTTGCCTGTTATTCGGGCCTTTGAGCACCAGCAGAGATTTCTAGCAAACAGTGAGAAGCAGATTGACACCAACCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS CCA 90 bp ATGGCAAGCCACCGGTTGGAGGTAATCCAGGAAAAGACGCATTTCTaGTTGGTGTCAATCTGCTTCTCACTGTTTGCTAGAAATCTCTGC +
Preference number: 5 (lower is better)
Translates to: MASHRLEVIQEKTHF*LVSICFSLFARNLC
Trigger: GCAGAGATTTCTAGCAAACAGTGAGAAGCAGATTGACACCAACCAGAAATGCGTCTTTTCCTGGATTACCTCCAACCGGTGGCTTGCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS CCA 90 bp TCGTGCAGTCCAATGGAGGCAATATCAATCCCATCAATGATGATCTaGCCACCTGCAGACTCTAAGATTCTGAAGAGGCAGTTTGTGAGG +
Preference number: 5 (lower is better)
Translates to: SCSPMEAISIPSMMI*PPADSKILKRQFVR
Trigger: CCTCACAAACTGCCTCTTCAGAATCTTAGAGTCTGCAGGTGGCCAGATCATCATTGATGGGATTGATATTGCCTCCATTGGACTGCACGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS-3UTR CAA 90 bp GATTCAAGTCTTCATAATTACAGCCTCAAATGGAAGACTACAGTGACCCTCCAGATAGATGTCTGCATCTaGATAGGTGGCCCGGGCCAG +
Preference number: 5 (lower is better)
Translates to: DSSLHNYSLKWKTTVTLQIDVCI*IGGPGQ
Trigger: CTGGCCCGGGCCACCTATCAAGATGCAGACATCTAT...CTGGAGGGTCACTGTAGTCTTCCATTTGAGGCTGTAATTATGAAGACTTGAATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS-3UTR CAA 90 bp AATACCTATATAACTGTGTTGGCCACGGTTCCGGAGCTGGAAATGGAAACACTGAGGGTTTGTGTGATGTaGAGGGCGTTGGACAGAACA +
Preference number: 5 (lower is better)
Translates to: NTYITVLATVPELEMETLRVCVM*RALDRT
Trigger: TGTTCTGTCCAACGCCCTCAACATCACACAAACCCT...CAGTGTTTCCATTTCCAGCTCCGGAACCGTGGCCAACACAGTTATATAGGTATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS-3UTR CAA 90 bp GATTCAAGTCTTCATAATTACAGCCTCAAATGGAAGACTACAGTGACCCTCCAGATGGAGCAACCCAAGTaGCAGGCCAGCCACAAAGGA +
Preference number: 5 (lower is better)
Translates to: DSSLHNYSLKWKTTVTLQMEQPK*QASHKG
Trigger: TCCTTTGTGGCTGGCCTGCAACTTGGGTTGCTCCAT...CTGGAGGGTCACTGTAGTCTTCCATTTGAGGCTGTAATTATGAAGACTTGAATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS GCA 90 bp AGAACATGGACAGGAACCAAGAATTCTTCTGTATACAGCATTGCCTaGAGTGTTGGATCACCAACACCAGGAGCCAAGTGCATAGGTAGA +
Preference number: 5 (lower is better)
Translates to: RTWTGTKNSSVYSIA*SVGSPTPGAKCIGR
Trigger: TCTACCTATGCACTTGGCTCCTGGTGTTGGTGATCCAACACTGCAGGCAATGCTGTATACAGAAGAATTCTTGGTTCCTGTCCATGTTCT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS GCA 90 bp TTGGTGTCAATCTGCTTCTCACTGTTTGCTAGAAATCTCTGCTGGTaGTCAAAGGCCCGAATAACAGGCAAACCAGAGACAGTCTCACTA +
Preference number: 5 (lower is better)
Translates to: LVSICFSLFARNLCW*SKARITGKPETVSL
Trigger: TAGTGAGACTGTCTCTGGTTTGCCTGTTATTCGGGCCTTTGAGCACCAGCAGAGATTTCTAGCAAACAGTGAGAAGCAGATTGACACCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS GCA 90 bp CCATCAAGTAGAAGGGACCCATATTGGACAGCAGTTCTTCAGGACTaGCGTATTCAACAATCTTGCCGCTGTCTAGGACCATTATCTTGT +
Preference number: 5 (lower is better)
Translates to: PSSRRDPYWTAVLQD*RIQQSCRCLGPLSC
Trigger: ACAAGATAATGGTCCTAGACAGCGGCAAGATTGTTGAATACGGCAGTCCTGAAGAACTGCTGTCCAATATGGGTCCCTTCTACTTGATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS-3UTR CAA 90 bp ATAACTGTGTTGGCCACGGTTCCGGAGCTGGAAATGGAAACACTGTTATCTAATCAGGACAAGGACATCTaGGCTCTGACTCTGCTTCTT +
Preference number: 5 (lower is better)
Translates to: ITVLATVPELEMETLLSNQDKDI*ALTLLL
Trigger: AAGAAGCAGAGTCAGAGCCAAGATGTCCTTGTCCTG...ATTAGATAACAGTGTTTCCATTTCCAGCTCCGGAACCGTGGCCAACACAGTTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS GCA 90 bp TGCTATCCTGCAGGAGTGCTCGTATCAGAGTCTGAAACTGGAATATaGCACATAATAGAGAGAGAATCCAGAACATGGACAGGAACCAAG +
Preference number: 5 (lower is better)
Translates to: CYPAGVLVSESETGI*HIIERESRTWTGTK
Trigger: CTTGGTTCCTGTCCATGTTCTGGATTCTCTCTCTATTATGTGGCATATTCCAGTTTCAGACTCTGATACGAGCACTCCTGCAGGATAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS-3UTR CAA 90 bp AATACCTATATAACTGTGTTGGCCACGGTTCCGGAGCTGGAAATGGAAACACTGCCGAATGCTGTTCACTaGCTCTTTAAAGGAAGGTTC +
Preference number: 5 (lower is better)
Translates to: NTYITVLATVPELEMETLPNAVH*LFKGRF
Trigger: GAACCTTCCTTTAAAGAGCAAGTGAACAGCATTCGG...CAGTGTTTCCATTTCCAGCTCCGGAACCGTGGCCAACACAGTTATATAGGTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS-3UTR CAA 90 bp TACCTATATAACTGTGTTGGCCACGGTTCCGGAGCTGGAAATGGAAACACTGTTTGCCTGTGCAAAGTTTaGGATGCATTTCTGCAAGCA +
Preference number: 5 (lower is better)
Translates to: YLYNCVGHGSGAGNGNTVCLCKV*DAFLQA
Trigger: TGCTTGCAGAAATGCATCCAAAACTTTGCACAGGCA...AACAGTGTTTCCATTTCCAGCTCCGGAACCGTGGCCAACACAGTTATATAGGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS TCA 90 bp GTCATGTTGGACTTGCTATCCTGCAGGAGTGCTCGTATCAGAGTCTaGAACTGGAATATGCCACATAATAGAGAGAGAATCCAGAACATG +
Preference number: 5 (lower is better)
Translates to: VMLDLLSCRSARIRV*NWNMPHNRERIQNM
Trigger: CATGTTCTGGATTCTCTCTCTATTATGTGGCATATTCCAGTTTCAGACTCTGATACGAGCACTCCTGCAGGATAGCAAGTCCAACATGAC
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS-3UTR CAA 90 bp ATAACTGTGTTGGCCACGGTTCCGGAGCTGGAAATGGAAACACTGTTATCTAATGATTTGGGAAAGTCTTaGGTGGCCTCAGACTTCTTT +
Preference number: 5 (lower is better)
Translates to: ITVLATVPELEMETLLSNDLGKS*VASDFF
Trigger: AAAGAAGTCTGAGGCCACCAAAGACTTTCCCAAATC...ATTAGATAACAGTGTTTCCATTTCCAGCTCCGGAACCGTGGCCAACACAGTTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS-3UTR CAA 90 bp AATATAGGACACCAGTTAAGAGAAAGCCAAGATAAACAAACCTGTACAGACTCCGAATTTCCTCCACAGTaGGGATCAGCCCACAGTCAC +
Preference number: 5 (lower is better)
Translates to: NIGHQLRESQDKQTCTDSEFPPQ*GSAHSH
Trigger: GTGACTGTGGGCTGATCCCAACTGTGGAGGAAATTC...GGAGTCTGTACAGGTTTGTTTATCTTGGCTTTCTCTTAACTGGTGTCCTATATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS GCA 90 bp AAGCGCAGCAAGTTCCTGAGTTCTTTCTTCCGAATGCTGTTCACTTaGTCTTTAAAGGAAGGTTCCCAGGCAAAGTATTTCAGGATCTTA +
Preference number: 5 (lower is better)
Translates to: KRSKFLSSFFRMLFT*SLKEGSQAKYFRIL
Trigger: TAAGATCCTGAAATACTTTGCCTGGGAACCTTCCTTTAAAGAGCAAGTGAACAGCATTCGGAAGAAAGAACTCAGGAACTTGCTGCGCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS CCA 90 bp ACTCTCTCCACAGGAAGAAAATGGACAAAGCAATCTGTAAAACACTaGACCACAGCAAGTGTATGTAGTTGGTCACGTCCATTAGCTTCT +
Preference number: 5 (lower is better)
Translates to: TLSTGRKWTKQSVKH*TTASVCSWSRPLAS
Trigger: AGAAGCTAATGGACGTGACCAACTACATACACTTGCTGTGGTCCAGTGTTTTACAGATTGCTTTGTCCATTTTCTTCCTGTGGAGAGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS-3UTR CAA 90 bp CTCAAATGTACCAGAAACTCACAAATAGATACTGACCCTCCTAAGAAACTGAGGAGGAGGAATTGTGGCTaGTCCAGTATCTTCTGTGAG +
Preference number: 5 (lower is better)
Translates to: LKCTRNSQIDTDPPKKLRRRNCG*SSIFCE
Trigger: CTCACAGAAGATACTGGACAAGCCACAATTCCTCCT...CCTCAGTTTCTTAGGAGGGTCAGTATCTATTTGTGAGTTTCTGGTACATTTGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS-3UTR CAA 90 bp ATAACTGTGTTGGCCACGGTTCCGGAGCTGGAAATGGAAACACTGTTATCTAATTCATCCGAGTATTTGTaGAAAGGGTCGAGATTCATC +
Preference number: 5 (lower is better)
Translates to: ITVLATVPELEMETLLSNSSEYL*KGSRFI
Trigger: GATGAATCTCGACCCTTTCAACAAATACTCGGATGA...ATTAGATAACAGTGTTTCCATTTCCAGCTCCGGAACCGTGGCCAACACAGTTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS-3UTR CAA 90 bp CTATTTACAATGTATCCAATCTGCAGAGTCAGGGAAGGGAAGGTCTTCCTTAAGTCCTCATCCGAGTATTaGTTGAAAGGGTCGAGATTC +
Preference number: 5 (lower is better)
Translates to: LFTMYPICRVREGKVFLKSSSEY*LKGSRF
Trigger: GAATCTCGACCCTTTCAACAAATACTCGGATGAGGA...CTTAAGGAAGACCTTCCCTTCCCTGACTCTGCAGATTGGATACATTGTAAATAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS-3UTR CAA 90 bp TCTCCCCAGCTCAGTTGTGGATTTTCTAAGGTACCTGATACTATTTATTTAAGTTCCAGGACCAGGATTTaGGATTTTCGAAGCACGGCC +
Preference number: 5 (lower is better)
Translates to: SPQLSCGFSKVPDTIYLSSRTRI*DFRSTA
Trigger: GGCCGTGCTTCGAAAATCCAAAATCCTGGTCCTGGA...ACTTAAATAAATAGTATCAGGTACCTTAGAAAATCCACAACTGAGCTGGGGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS-3UTR CAA 90 bp CTATTTACAATGTATCCAATCTGCAGAGTCAGGGAAGGGAAGGTCTTCCTTAAGCCCACACATCTTCTATaGTCAATGGATGCTTGTAAC +
Preference number: 5 (lower is better)
Translates to: LFTMYPICRVREGKVFLKPTHLL*SMDACN
Trigger: GTTACAAGCATCCATTGACAATAGAAGATGTGTGGG...CTTAAGGAAGACCTTCCCTTCCCTGACTCTGCAGATTGGATACATTGTAAATAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS-3UTR CAA 90 bp TCTCCCCAGCTCAGTTGTGGATTTTCTAAGGTACCTGATACTATTTATTTAAGTTTCACCAACCAGGATTaGGGAAAGTCTTTGGTGGCC +
Preference number: 5 (lower is better)
Translates to: SPQLSCGFSKVPDTIYLSFTNQD*GKSLVA
Trigger: GGCCACCAAAGACTTTCCCAAATCCTGGTTGGTGAA...ACTTAAATAAATAGTATCAGGTACCTTAGAAAATCCACAACTGAGCTGGGGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS-3UTR CAA 90 bp TCTCCCCAGCTCAGTTGTGGATTTTCTAAGGTACCTGATACTATTTATTTAAGTGGGCCCACAACCTTGTaGAAAATGTGTTTTCCCACG +
Preference number: 5 (lower is better)
Translates to: SPQLSCGFSKVPDTIYLSGPTTL*KMCFPT
Trigger: CGTGGGAAAACACATTTTCAACAAGGTTGTGGGCCC...ACTTAAATAAATAGTATCAGGTACCTTAGAAAATCCACAACTGAGCTGGGGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS CCA 90 bp TCTGAAACTGGAATATGCCACATAATAGAGAGAGAATCCAGAACATaGACAGGAACCAAGAATTCTTCTGTATACAGCATTGCCTGCAGT +
Preference number: 5 (lower is better)
Translates to: SETGICHIIERESRT*TGTKNSSVYSIACS
Trigger: ACTGCAGGCAATGCTGTATACAGAAGAATTCTTGGTTCCTGTCCATGTTCTGGATTCTCTCTCTATTATGTGGCATATTCCAGTTTCAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS-3UTR CAA 90 bp TCTCCCCAGCTCAGTTGTGGATTTTCTAAGGTACCTGATACTATTTATTTAAGTCTTCTGTATACAGCATaGCCTGCAGTGTTGGATCAC +
Preference number: 5 (lower is better)
Translates to: SPQLSCGFSKVPDTIYLSLLYTA*PAVLDH
Trigger: GTGATCCAACACTGCAGGCAATGCTGTATACAGAAG...ACTTAAATAAATAGTATCAGGTACCTTAGAAAATCCACAACTGAGCTGGGGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS-3UTR CAA 90 bp GATTCAAGTCTTCATAATTACAGCCTCAAATGGAAGACTACAGTGACCCTCCAGCAGAGAACATTAGGATaGCATAGATATATCCAACCC +
Preference number: 5 (lower is better)
Translates to: DSSLHNYSLKWKTTVTLQQRTLG*HRYIQP
Trigger: GGGTTGGATATATCTATGCAATCCTAATGTTCTCTG...CTGGAGGGTCACTGTAGTCTTCCATTTGAGGCTGTAATTATGAAGACTTGAATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS-3UTR CAA 90 bp TCTCCCCAGCTCAGTTGTGGATTTTCTAAGGTACCTGATACTATTTATTTAAGTCGTGTGTTGAGTCGCTaGATTCTGAAAAGGCTGAAA +
Preference number: 5 (lower is better)
Translates to: SPQLSCGFSKVPDTIYLSRVLSR*ILKRLK
Trigger: TTTCAGCCTTTTCAGAATCAAGCGACTCAACACACG...ACTTAAATAAATAGTATCAGGTACCTTAGAAAATCCACAACTGAGCTGGGGAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS-3UTR CAA 90 bp TCTCCCCAGCTCAGTTGTGGATTTTCTAAGGTACCTGATACTATTTATTTAAGTATGATCGTCTTAAACTaGCTGGTGAGTGACTTGGCT +
Preference number: 5 (lower is better)
Translates to: SPQLSCGFSKVPDTIYLSMIVLN*LVSDLA
Trigger: AGCCAAGTCACTCACCAGCAAGTTTAAGACGATCAT...ACTTAAATAAATAGTATCAGGTACCTTAGAAAATCCACAACTGAGCTGGGGAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS-3UTR CAA 90 bp TCTCCCCAGCTCAGTTGTGGATTTTCTAAGGTACCTGATACTATTTATTTAAGTTCTGCTTCTCACTGTTaGCTAGAAATCTCTGCTGGT +
Preference number: 5 (lower is better)
Translates to: SPQLSCGFSKVPDTIYLSSASHC*LEISAG
Trigger: ACCAGCAGAGATTTCTAGCAAACAGTGAGAAGCAGA...ACTTAAATAAATAGTATCAGGTACCTTAGAAAATCCACAACTGAGCTGGGGAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS-3UTR CAA 90 bp TCTCCCCAGCTCAGTTGTGGATTTTCTAAGGTACCTGATACTATTTATTTAAGTTCTAGGACCATTATCTaGTCACTGTCCATGATGGTG +
Preference number: 5 (lower is better)
Translates to: SPQLSCGFSKVPDTIYLSSRTII*SLSMMV
Trigger: CACCATCATGGACAGTGACAAGATAATGGTCCTAGA...ACTTAAATAAATAGTATCAGGTACCTTAGAAAATCCACAACTGAGCTGGGGAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS TCA 90 bp TTTCTGCAGGTCCTTTGTCATGATCGTCTTAAACTTGCTGGTGAGTaGCTTGGCTTTAAGATTTTCTTCAATATCCCACACATCTTCTAT +
Preference number: 5 (lower is better)
Translates to: FLQVLCHDRLKLAGE*LGFKIFFNIPHIFY
Trigger: ATAGAAGATGTGTGGGATATTGAAGAAAATCTTAAAGCCAAGTCACTCACCAGCAAGTTTAAGACGATCATGACAAAGGACCTGCAGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS TCA 90 bp TATGAGTCAGGGTCTTTCACGAAGCCAATGAGAAATTTCAGCAGCTaGGGATTCAGAAACAAAAGAATATCATGTGCTAATTTCAGAATA +
Preference number: 5 (lower is better)
Translates to: YESGSFTKPMRNFSS*GFRNKRISCANFRI
Trigger: TATTCTGAAATTAGCACATGATATTCTTTTGTTTCTGAATCCTCAGCTGCTGAAATTTCTCATTGGCTTCGTGAAAGACCCTGACTCATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS GCA 72 bp CGAAGCACGGCCCTACCCAGGCATAGGAGCTGCCTCTaGCCTATGCTCAGGTTGTCACCGCCCTCTGTCACT +
Preference number: 6 (lower is better)
Translates to: RSTALPRHRSCL*PMLRLSPPSVT
Trigger: AGTGACAGAGGGCGGTGACAACCTGAGCATAGGGCAGAGGCAGCTCCTATGCCTGGGTAGGGCCGTGCTTCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS TCA 72 bp CCCTCAGGGCTCTGCTGGGACTTCTTCAGCCGCCTCTaGAGAGCCTGCCTGGCTTTCTGCAGGTCCTTTGTC +
Preference number: 6 (lower is better)
Translates to: PSGLCWDFFSRL*RACLAFCRSFV
Trigger: GACAAAGGACCTGCAGAAAGCCAGGCAGGCTCTTCAGAGGCGGCTGAAGAAGTCCCAGCAGAGCCCTGAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS GCA 72 bp GGCTCTGACTCTGCTTCTTGGTCAATCCGTGTGACGTaGCCTCAGGGCTCTGCTGGGACTTCTTCAGCCGCC +
Preference number: 6 (lower is better)
Translates to: GSDSASWSIRVT*PQGSAGTSSAA
Trigger: GGCGGCTGAAGAAGTCCCAGCAGAGCCCTGAGGGCACGTCACACGGATTGACCAAGAAGCAGAGTCAGAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS TCA 72 bp ACTGCTCCAGCCGGTCTACAGAGACGCTGGCCTGGATaGCTGAAGAGATCACCATGGGAAGCATGGCCAGAG +
Preference number: 6 (lower is better)
Translates to: TAPAGLQRRWPG*LKRSPWEAWPE
Trigger: CTCTGGCCATGCTTCCCATGGTGATCTCTTCAGTCATCCAGGCCAGCGTCTCTGTAGACCGGCTGGAGCAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS TCA 72 bp CTCCAGCCGGTCTACAGAGACGCTGGCCTGGATGACTaGAGAGATCACCATGGGAAGCATGGCCAGAGGAAA +
Preference number: 6 (lower is better)
Translates to: LQPVYRDAGLDD*RDHHGKHGQRK
Trigger: TTTCCTCTGGCCATGCTTCCCATGGTGATCTCTTCAGTCATCCAGGCCAGCGTCTCTGTAGACCGGCTGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS TCA 72 bp TGCACTGGGAGAACTCGTTCCGGATGGTCGTCTGAATaGGGCTATCCGTCTCTAGATCCACTGCGGCTGTGG +
Preference number: 6 (lower is better)
Translates to: CTGRTRSGWSSE*GYPSLDPLRLW
Trigger: CCACAGCCGCAGTGGATCTAGAGACGGATAGCCTCATTCAGACGACCATCCGGAACGAGTTCTCCCAGTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS CCA 72 bp CCAGGACAAGGACATCTTGGCTCTGACTCTGCTTCTTaGTCAATCCGTGTGACGTGCCCTCAGGGCTCTGCT +
Preference number: 6 (lower is better)
Translates to: PGQGHLGSDSAS*SIRVTCPQGSA
Trigger: AGCAGAGCCCTGAGGGCACGTCACACGGATTGACCAAGAAGCAGAGTCAGAGCCAAGATGTCCTTGTCCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS CAA 90 bp GCTCAGGTTGTCACCGCCCTCTGTCACTTCATGGAGCAACCCAAGTaGCAGGCCAGCCACAAAGGATTTGAGATGAGCCAATTCCAGGGC +
Preference number: 6 (lower is better)
Translates to: AQVVTALCHFMEQPK*QASHKGFEMSQFQG
Trigger: GCCCTGGAATTGGCTCATCTCAAATCCTTTGTGGCTGGCCTGCAACTTGGGTTGCTCCATGAAGTGACAGAGGGCGGTGACAACCTGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS TCA 72 bp ATCTTGGCTCTGACTCTGCTTCTTGGTCAATCCGTGTaGCGTGCCCTCAGGGCTCTGCTGGGACTTCTTCAG +
Preference number: 6 (lower is better)
Translates to: ILALTLLLGQSV*RALRALLGLLQ
Trigger: CTGAAGAAGTCCCAGCAGAGCCCTGAGGGCACGTCACACGGATTGACCAAGAAGCAGAGTCAGAGCCAAGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS CCA 72 bp CTCAGCCATGTCTCCTCCAGGCAACATTTCCAAGTCTaGGAGGAGAGCGCACGCTTCGATAACTCGCTGGTA +
Preference number: 6 (lower is better)
Translates to: LSHVSSRQHFQV*EESARFDNSLV
Trigger: TACCAGCGAGTTATCGAAGCGTGCGCTCTCCTCCCAGACTTGGAAATGTTGCCTGGAGGAGACATGGCTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS CCA 72 bp CCTATGCTCAGGTTGTCACCGCCCTCTGTCACTTCATaGAGCAACCCAAGTTGCAGGCCAGCCACAAAGGAT +
Preference number: 6 (lower is better)
Translates to: PMLRLSPPSVTS*SNPSCRPATKD
Trigger: ATCCTTTGTGGCTGGCCTGCAACTTGGGTTGCTCCATGAAGTGACAGAGGGCGGTGACAACCTGAGCATAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS CAA 72 bp CCGGTCCTGCCCACCACACCGACCTTCTCGGTGCTCTaGATGTTACAAGTAATCCCTTTCAGGACCAGATCC +
Preference number: 6 (lower is better)
Translates to: PVLPTTPTFSVL*MLQVIPFRTRS
Trigger: GGATCTGGTCCTGAAAGGGATTACTTGTAACATCAAGAGCACCGAGAAGGTCGGTGTGGTGGGCAGGACCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS CCA 72 bp AGAGCCTACAGTGCCCACCACAGCCACCAGTTGGCCTaGTTTTATGTCCAGGTTCACATCTTGGATTGTGGC +
Preference number: 6 (lower is better)
Translates to: RAYSAHHSHQLA*FYVQVHILDCG
Trigger: GCCACAATCCAAGATGTGAACCTGGACATAAAACCAGGCCAACTGGTGGCTGTGGTGGGCACTGTAGGCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS CCA 72 bp GGCTCAGTGTTCGGCGAAGGCTGTTCTCCCTTCTCATaGTCAAGGAAGCTGCATCGTCAGGAATTTCCTCCA +
Preference number: 6 (lower is better)
Translates to: GSVFGEGCSPFS*SRKLHRQEFPP
Trigger: TGGAGGAAATTCCTGACGATGCAGCTTCCTTGACCATGAGAAGGGAGAACAGCCTTCGCCGAACACTGAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS CAA 72 bp GTCACCGCCCTCTGTCACTTCATGGAGCAACCCAAGTaGCAGGCCAGCCACAAAGGATTTGAGATGAGCCAA +
Preference number: 6 (lower is better)
Translates to: VTALCHFMEQPK*QASHKGFEMSQ
Trigger: TTGGCTCATCTCAAATCCTTTGTGGCTGGCCTGCAACTTGGGTTGCTCCATGAAGTGACAGAGGGCGGTGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS GCA 72 bp GCGAAGGCTGTTCTCCCTTCTCATGGTCAAGGAAGCTaGATCGTCAGGAATTTCCTCCACAGTTGGGATCAG +
Preference number: 6 (lower is better)
Translates to: AKAVLPSHGQGS*IVRNFLHSWDQ
Trigger: CTGATCCCAACTGTGGAGGAAATTCCTGACGATGCAGCTTCCTTGACCATGAGAAGGGAGAACAGCCTTCGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS CCA 72 bp TTCCCAGAGCCTACAGTGCCCACCACAGCCACCAGTTaGCCTGGTTTTATGTCCAGGTTCACATCTTGGATT +
Preference number: 6 (lower is better)
Translates to: FPEPTVPTTATS*PGFMSRFTSWI
Trigger: AATCCAAGATGTGAACCTGGACATAAAACCAGGCCAACTGGTGGCTGTGGTGGGCACTGTAGGCTCTGGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS CCA 72 bp GCTCCGTGTGGTTCACACTTTCAATGCCGGCTTCCTTaGCCATCAAGTAGAAGGGACCCATATTGGACAGCA +
Preference number: 6 (lower is better)
Translates to: APCGSHFQCRLP*PSSRRDPYWTA
Trigger: TGCTGTCCAATATGGGTCCCTTCTACTTGATGGCCAAGGAAGCCGGCATTGAAAGTGTGAACCACACGGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS CAA 72 bp TCAAGGAAGCTGCATCGTCAGGAATTTCCTCCACAGTaGGGATCAGCCCACAGTCACCATCCTCTTCCTCAC +
Preference number: 6 (lower is better)
Translates to: SRKLHRQEFPPQ*GSAHSHHPLPH
Trigger: GTGAGGAAGAGGATGGTGACTGTGGGCTGATCCCAACTGTGGAGGAAATTCCTGACGATGCAGCTTCCTTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS CAA 90 bp CACCACAGCCACCAGTTGGCCTGGTTTTATGTCCAGGTTCACATCTaGGATTGTGGCTTCCAAGTCCCGGTCCCAAGTAAAAGAGGCTTC +
Preference number: 6 (lower is better)
Translates to: HHSHQLAWFYVQVHI*DCGFQVPVPSKRGF
Trigger: GAAGCCTCTTTTACTTGGGACCGGGACTTGGAAGCCACAATCCAAGATGTGAACCTGGACATAAAACCAGGCCAACTGGTGGCTGTGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS TCA 72 bp TTTTTCGAGTCTTCCAGGACAAGGACATCTTGGCTCTaGCTCTGCTTCTTGGTCAATCCGTGTGACGTGCCC +
Preference number: 6 (lower is better)
Translates to: FFESSRTRTSWL*LCFLVNPCDVP
Trigger: GGGCACGTCACACGGATTGACCAAGAAGCAGAGTCAGAGCCAAGATGTCCTTGTCCTGGAAGACTCGAAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS GCA 72 bp TCCTGGGGAATGATGGTCAGTCTCCCTCGAAGGTCGTaGAGTCCAATGGAGGCAATATCAATCCCATCAATG +
Preference number: 6 (lower is better)
Translates to: SWGMMVSLPRRS*SPMEAISIPSM
Trigger: CATTGATGGGATTGATATTGCCTCCATTGGACTGCACGACCTTCGAGGGAGACTGACCATCATTCCCCAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS TCA 72 bp CCCAGAGCTCCAAAGACCCCGATTCTCATGTCCCTCTaGGAAGGTGAATTGTCGGTCCCATTCTGTTTTTCA +
Preference number: 6 (lower is better)
Translates to: PRAPKTPILMSL*EGELSVPFCFS
Trigger: TGAAAAACAGAATGGGACCGACAATTCACCTTCTCAGAGGGACATGAGAATCGGGGTCTTTGGAGCTCTGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS GCA 72 bp CCATCAGGTCACTATAGGATCCCTTCTCTAAGATGGTaGCTTTCCCCAGAACGACAATCTCATCCACTTGGG +
Preference number: 6 (lower is better)
Translates to: PSGHYRIPSLRW*LSPERQSHPLG
Trigger: CCCAAGTGGATGAGATTGTCGTTCTGGGGAAAGGCACCATCTTAGAGAAGGGATCCTATAGTGACCTGATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS GCA 72 bp AGAAGGGACCCATATTGGACAGCAGTTCTTCAGGACTaGCGTATTCAACAATCTTGCCGCTGTCTAGGACCA +
Preference number: 6 (lower is better)
Translates to: RRDPYWTAVLQD*RIQQSCRCLGP
Trigger: TGGTCCTAGACAGCGGCAAGATTGTTGAATACGGCAGTCCTGAAGAACTGCTGTCCAATATGGGTCCCTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS CCA 72 bp CATAGGAGACGAAGAACAGGCAGGAATAGGTCATGTTaGACTTGCTATCCTGCAGGAGTGCTCGTATCAGAG +
Preference number: 6 (lower is better)
Translates to: HRRRRTGRNRSC*TCYPAGVLVSE
Trigger: CTCTGATACGAGCACTCCTGCAGGATAGCAAGTCCAACATGACCTATTCCTGCCTGTTCTTCGTCTCCTATG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS CCA 72 bp AAGTCTGGGAGGAGAGCGCACGCTTCGATAACTCGCTaGTACTTCTTTTCATCGTATTCTGACCCAAACAGG +
Preference number: 6 (lower is better)
Translates to: KSGRRAHASITR*YFFSSYSDPNR
Trigger: CCTGTTTGGGTCAGAATACGATGAAAAGAAGTACCAGCGAGTTATCGAAGCGTGCGCTCTCCTCCCAGACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS CCA 72 bp CGGCTTCCTTGGCCATCAAGTAGAAGGGACCCATATTaGACAGCAGTTCTTCAGGACTGCCGTATTCAACAA +
Preference number: 6 (lower is better)
Translates to: RLPWPSSRRDPY*TAVLQDCRIQQ
Trigger: TTGTTGAATACGGCAGTCCTGAAGAACTGCTGTCCAATATGGGTCCCTTCTACTTGATGGCCAAGGAAGCCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS CAA 72 bp CACCAGTTGGCCTGGTTTTATGTCCAGGTTCACATCTaGGATTGTGGCTTCCAAGTCCCGGTCCCAAGTAAA +
Preference number: 6 (lower is better)
Translates to: HQLAWFYVQVHI*DCGFQVPVPSK
Trigger: TTTACTTGGGACCGGGACTTGGAAGCCACAATCCAAGATGTGAACCTGGACATAAAACCAGGCCAACTGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS CAA 90 bp GCAAGCCACCGGTTGGAGGTAATCCAGGAAAAGACGCATTTCTGGTaGGTGTCAATCTGCTTCTCACTGTTTGCTAGAAATCTCTGCTGG +
Preference number: 6 (lower is better)
Translates to: ASHRLEVIQEKTHFW*VSICFSLFARNLCW
Trigger: CCAGCAGAGATTTCTAGCAAACAGTGAGAAGCAGATTGACACCAACCAGAAATGCGTCTTTTCCTGGATTACCTCCAACCGGTGGCTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS GCA 72 bp ACAGGAACCAAGAATTCTTCTGTATACAGCATTGCCTaGAGTGTTGGATCACCAACACCAGGAGCCAAGTGC +
Preference number: 6 (lower is better)
Translates to: TGTKNSSVYSIA*SVGSPTPGAKC
Trigger: GCACTTGGCTCCTGGTGTTGGTGATCCAACACTGCAGGCAATGCTGTATACAGAAGAATTCTTGGTTCCTGT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS GCA 72 bp AGACGAAGAACAGGCAGGAATAGGTCATGTTGGACTTaGTATCCTGCAGGAGTGCTCGTATCAGAGTCTGAA +
Preference number: 6 (lower is better)
Translates to: RRRTGRNRSCWT*YPAGVLVSESE
Trigger: TTCAGACTCTGATACGAGCACTCCTGCAGGATAGCAAGTCCAACATGACCTATTCCTGCCTGTTCTTCGTCT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS CCA 72 bp TCTGAGAACTGCACAGCTTTATCAAAATGGCAGACATaGCGAATGGCAGACAAGTCCAGATCATCGCTTCCC +
Preference number: 6 (lower is better)
Translates to: SENCTALSKWQT*RMADKSRSSLP
Trigger: GGGAAGCGATGATCTGGACTTGTCTGCCATTCGCCATGTCTGCCATTTTGATAAAGCTGTGCAGTTCTCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS CCA 72 bp ACCAGTTGGCCTGGTTTTATGTCCAGGTTCACATCTTaGATTGTGGCTTCCAAGTCCCGGTCCCAAGTAAAA +
Preference number: 6 (lower is better)
Translates to: TSWPGFMSRFTS*IVASKSRSQVK
Trigger: TTTTACTTGGGACCGGGACTTGGAAGCCACAATCCAAGATGTGAACCTGGACATAAAACCAGGCCAACTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS CAA 72 bp GACAGCAGTTCTTCAGGACTGCCGTATTCAACAATCTaGCCGCTGTCTAGGACCATTATCTTGTCACTGTCC +
Preference number: 6 (lower is better)
Translates to: DSSSSGLPYSTI*PLSRTIILSLS
Trigger: GGACAGTGACAAGATAATGGTCCTAGACAGCGGCAAGATTGTTGAATACGGCAGTCCTGAAGAACTGCTGTC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS CAA 90 bp GAAGAGGGTGATGGAGGTGAAAGCCTTCTCCGCGTTCAAAACATTTaGACTATCCACCAGGACGTAAACAGAAAATGTGATCACGGACAC +
Preference number: 6 (lower is better)
Translates to: EEGDGGESLLRVQNI*TIHQDVNRKCDHGH
Trigger: GTGTCCGTGATCACATTTTCTGTTTACGTCCTGGTGGATAGTCAAAATGTTTTGAACGCGGAGAAGGCTTTCACCTCCATCACCCTCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS GCA 72 bp GGAATAGGTCATGTTGGACTTGCTATCCTGCAGGAGTaGTCGTATCAGAGTCTGAAACTGGAATATGCCACA +
Preference number: 6 (lower is better)
Translates to: GIGHVGLAILQE*SYQSLKLEYAT
Trigger: TGTGGCATATTCCAGTTTCAGACTCTGATACGAGCACTCCTGCAGGATAGCAAGTCCAACATGACCTATTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS GCA 72 bp AAGTCCCGGTCCCAAGTAAAAGAGGCTTCTGAGAACTaGACAGCTTTATCAAAATGGCAGACATGGCGAATG +
Preference number: 6 (lower is better)
Translates to: KSRSQVKEASEN*TALSKWQTWRM
Trigger: CATTCGCCATGTCTGCCATTTTGATAAAGCTGTGCAGTTCTCAGAAGCCTCTTTTACTTGGGACCGGGACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS GCA 72 bp TCGTTATCGACTGTAGCCTCTCCTTCAGGTCCCGAATaGTTCATGAATGTCTTCCAGTTCTTAGCGAACACT +
Preference number: 6 (lower is better)
Translates to: SLSTVASPSGPE*FMNVFQFLANT
Trigger: AGTGTTCGCTAAGAACTGGAAGACATTCATGAAGCATTCGGGACCTGAAGGAGAGGCTACAGTCGATAACGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS GCA 72 bp ATCTGCTTCTCACTGTTTGCTAGAAATCTCTGCTGGTaGTCAAAGGCCCGAATAACAGGCAAACCAGAGACA +
Preference number: 6 (lower is better)
Translates to: ICFSLFARNLCW*SKARITGKPET
Trigger: TGTCTCTGGTTTGCCTGTTATTCGGGCCTTTGAGCACCAGCAGAGATTTCTAGCAAACAGTGAGAAGCAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS GCA 72 bp GTGTCAATCTGCTTCTCACTGTTTGCTAGAAATCTCTaGTGGTGCTCAAAGGCCCGAATAACAGGCAAACCA +
Preference number: 6 (lower is better)
Translates to: VSICFSLFARNL*WCSKARITGKP
Trigger: TGGTTTGCCTGTTATTCGGGCCTTTGAGCACCAGCAGAGATTTCTAGCAAACAGTGAGAAGCAGATTGACAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS GCA 72 bp ACAGCAGTTCTTCAGGACTGCCGTATTCAACAATCTTaGCGCTGTCTAGGACCATTATCTTGTCACTGTCCA +
Preference number: 6 (lower is better)
Translates to: TAVLQDCRIQQS*RCLGPLSCHCP
Trigger: TGGACAGTGACAAGATAATGGTCCTAGACAGCGGCAAGATTGTTGAATACGGCAGTCCTGAAGAACTGCTGT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS CCA 72 bp TGTCCATCAGGTCACTATAGGATCCCTTCTCTAAGATaGTGCCTTTCCCCAGAACGACAATCTCATCCACTT +
Preference number: 6 (lower is better)
Translates to: CPSGHYRIPSLR*CLSPERQSHPL
Trigger: AAGTGGATGAGATTGTCGTTCTGGGGAAAGGCACCATCTTAGAGAAGGGATCCTATAGTGACCTGATGGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS CCA 72 bp TCAATCTGCTTCTCACTGTTTGCTAGAAATCTCTGCTaGTGCTCAAAGGCCCGAATAACAGGCAAACCAGAG +
Preference number: 6 (lower is better)
Translates to: SICFSLFARNLC*CSKARITGKPE
Trigger: CTCTGGTTTGCCTGTTATTCGGGCCTTTGAGCACCAGCAGAGATTTCTAGCAAACAGTGAGAAGCAGATTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS CCA 72 bp CACCGGTTGGAGGTAATCCAGGAAAAGACGCATTTCTaGTTGGTGTCAATCTGCTTCTCACTGTTTGCTAGA +
Preference number: 6 (lower is better)
Translates to: HRLEVIQEKTHF*LVSICFSLFAR
Trigger: TCTAGCAAACAGTGAGAAGCAGATTGACACCAACCAGAAATGCGTCTTTTCCTGGATTACCTCCAACCGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS CCA 72 bp CCAATGGAGGCAATATCAATCCCATCAATGATGATCTaGCCACCTGCAGACTCTAAGATTCTGAAGAGGCAG +
Preference number: 6 (lower is better)
Translates to: PMEAISIPSMMI*PPADSKILKRQ
Trigger: CTGCCTCTTCAGAATCTTAGAGTCTGCAGGTGGCCAGATCATCATTGATGGGATTGATATTGCCTCCATTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS CAA 72 bp AAATCTCTTGGTCCTGGATCTGTATATTCTGTAAAGTaGCCAAGGCGCCAAGAGCCAAAGAAAGCCCAAGGG +
Preference number: 6 (lower is better)
Translates to: KSLGPGSVYSVK*PRRQEPKKAQG
Trigger: CCCTTGGGCTTTCTTTGGCTCTTGGCGCCTTGGCAACTTTACAGAATATACAGATCCAGGACCAAGAGATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS CAA 90 bp AGTTATAGCAAATCTCTTGGTCCTGGATCTGTATATTCTGTAAAGTaGCCAAGGCGCCAAGAGCCAAAGAAAGCCCAAGGGAATCCACAC +
Preference number: 6 (lower is better)
Translates to: SYSKSLGPGSVYSVK*PRRQEPKKAQGNPH
Trigger: GTGTGGATTCCCTTGGGCTTTCTTTGGCTCTTGGCGCCTTGGCAACTTTACAGAATATACAGATCCAGGACCAAGAGATTTGCTATAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS CAA 90 bp GCCTGCCTGGCTTTCTGCAGGTCCTTTGTCATGATCGTCTTAAACTaGCTGGTGAGTGACTTGGCTTTAAGATTTTCTTCAATATCCCAC +
Preference number: 6 (lower is better)
Translates to: ACLAFCRSFVMIVLN*LVSDLALRFSSISH
Trigger: GTGGGATATTGAAGAAAATCTTAAAGCCAAGTCACTCACCAGCAAGTTTAAGACGATCATGACAAAGGACCTGCAGAAAGCCAGGCAGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS GCA 72 bp GTTGGAGTTAGGTGTAAGATGAAAATCAAAATCGTCTaGAGCTGGCTGAAGCGCAGCAAGTTCCTGAGTTCT +
Preference number: 6 (lower is better)
Translates to: VGVRCKMKIKIV*SWLKRSKFLSS
Trigger: AGAACTCAGGAACTTGCTGCGCTTCAGCCAGCTGCAGACGATTTTGATTTTCATCTTACACCTAACTCCAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS CCA 72 bp AAAGAGGCTTCTGAGAACTGCACAGCTTTATCAAAATaGCAGACATGGCGAATGGCAGACAAGTCCAGATCA +
Preference number: 6 (lower is better)
Translates to: KEASENCTALSK*QTWRMADKSRS
Trigger: TGATCTGGACTTGTCTGCCATTCGCCATGTCTGCCATTTTGATAAAGCTGTGCAGTTCTCAGAAGCCTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS CCA 72 bp ACCACCATCCTACCGCCTGCAGATATTTCAGGTAGATaGAGAACTTTACCTTCCCAGTTTCCACAAATTCCT +
Preference number: 6 (lower is better)
Translates to: TTILPPADISGR*RTLPSQFPQIP
Trigger: AGGAATTTGTGGAAACTGGGAAGGTAAAGTTCTCCATCTACCTGAAATATCTGCAGGCGGTAGGATGGTGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS TCA 72 bp CATTTTGACTATCCACCAGGACGTAAACAGAAAATGTaGTCACGGACACCAGGGTTGGAGTTAGGTGTAAGA +
Preference number: 6 (lower is better)
Translates to: HFDYPPGRKQKM*SRTPGLELGVR
Trigger: TCTTACACCTAACTCCAACCCTGGTGTCCGTGATCACATTTTCTGTTTACGTCCTGGTGGATAGTCAAAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS GCA 72 bp GCAGGAGTGCTCGTATCAGAGTCTGAAACTGGAATATaGCACATAATAGAGAGAGAATCCAGAACATGGACA +
Preference number: 6 (lower is better)
Translates to: AGVLVSESETGI*HIIERESRTWT
Trigger: TGTCCATGTTCTGGATTCTCTCTCTATTATGTGGCATATTCCAGTTTCAGACTCTGATACGAGCACTCCTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS GCA 72 bp ATGGGTGCGCGGAGAATGTTGGTTAACAGCTGCCTGTaGAAAGTTTTGGATGCATTTCTGCAAGCATATATA +
Preference number: 6 (lower is better)
Translates to: MGARRMLVNSCL*KVLDAFLQAYI
Trigger: TATATATGCTTGCAGAAATGCATCCAAAACTTTGCACAGGCAGCTGTTAACCAACATTCTCCGCGCACCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS CCA 72 bp GTTAGGTGTAAGATGAAAATCAAAATCGTCTGCAGCTaGCTGAAGCGCAGCAAGTTCCTGAGTTCTTTCTTC +
Preference number: 6 (lower is better)
Translates to: VRCKMKIKIVCS*LKRSKFLSSFF
Trigger: GAAGAAAGAACTCAGGAACTTGCTGCGCTTCAGCCAGCTGCAGACGATTTTGATTTTCATCTTACACCTAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS CAA 72 bp CGGTTGGAGGTAATCCAGGAAAAGACGCATTTCTGGTaGGTGTCAATCTGCTTCTCACTGTTTGCTAGAAAT +
Preference number: 6 (lower is better)
Translates to: RLEVIQEKTHFW*VSICFSLFARN
Trigger: ATTTCTAGCAAACAGTGAGAAGCAGATTGACACCAACCAGAAATGCGTCTTTTCCTGGATTACCTCCAACCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS CAA 72 bp GATGGAGGTGAAAGCCTTCTCCGCGTTCAAAACATTTaGACTATCCACCAGGACGTAAACAGAAAATGTGAT +
Preference number: 6 (lower is better)
Translates to: DGGESLLRVQNI*TIHQDVNRKCD
Trigger: ATCACATTTTCTGTTTACGTCCTGGTGGATAGTCAAAATGTTTTGAACGCGGAGAAGGCTTTCACCTCCATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS CAA 72 bp TTTATGTATTCATTTATTCGCTCAACAGCCACGATGTaGGTCTCTACTTCTGACGTCATCCTCACTAGCCAG +
Preference number: 6 (lower is better)
Translates to: FMYSFIRSTATM*VSTSDVILTSQ
Trigger: CTGGCTAGTGAGGATGACGTCAGAAGTAGAGACCAACATCGTGGCTGTTGAGCGAATAAATGAATACATAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS CAA 90 bp TTATCCACATTTATGTATTCATTTATTCGCTCAACAGCCACGATGTaGGTCTCTACTTCTGACGTCATCCTCACTAGCCAGTTCAGGGTT +
Preference number: 6 (lower is better)
Translates to: LSTFMYSFIRSTATM*VSTSDVILTSQFRV
Trigger: AACCCTGAACTGGCTAGTGAGGATGACGTCAGAAGTAGAGACCAACATCGTGGCTGTTGAGCGAATAAATGAATACATAAATGTGGATAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS TCA 72 bp TTCGATAACTCGCTGGTACTTCTTTTCATCGTATTCTaGCCCAAACAGGATGTTATCTTTGATGGTCCCGTT +
Preference number: 6 (lower is better)
Translates to: FDNSLVLLFIVF*PKQDVIFDGPV
Trigger: AACGGGACCATCAAAGATAACATCCTGTTTGGGTCAGAATACGATGAAAAGAAGTACCAGCGAGTTATCGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS CCA 72 bp GGAGAATGTTGGTTAACAGCTGCCTGTGCAAAGTTTTaGATGCATTTCTGCAAGCATATATACTCCATAGAC +
Preference number: 6 (lower is better)
Translates to: GECWLTAACAKF*MHFCKHIYSID
Trigger: GTCTATGGAGTATATATGCTTGCAGAAATGCATCCAAAACTTTGCACAGGCAGCTGTTAACCAACATTCTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS CAA 72 bp GCTTTCTGCAGGTCCTTTGTCATGATCGTCTTAAACTaGCTGGTGAGTGACTTGGCTTTAAGATTTTCTTCA +
Preference number: 6 (lower is better)
Translates to: AFCRSFVMIVLN*LVSDLALRFSS
Trigger: TGAAGAAAATCTTAAAGCCAAGTCACTCACCAGCAAGTTTAAGACGATCATGACAAAGGACCTGCAGAAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS CAA 72 bp CGGAGAATGTTGGTTAACAGCTGCCTGTGCAAAGTTTaGGATGCATTTCTGCAAGCATATATACTCCATAGA +
Preference number: 6 (lower is better)
Translates to: RRMLVNSCLCKV*DAFLQAYILHR
Trigger: TCTATGGAGTATATATGCTTGCAGAAATGCATCCAAAACTTTGCACAGGCAGCTGTTAACCAACATTCTCCG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS TCA 72 bp GTCCTTTGTCATGATCGTCTTAAACTTGCTGGTGAGTaGCTTGGCTTTAAGATTTTCTTCAATATCCCACAC +
Preference number: 6 (lower is better)
Translates to: VLCHDRLKLAGE*LGFKIFFNIPH
Trigger: GTGTGGGATATTGAAGAAAATCTTAAAGCCAAGTCACTCACCAGCAAGTTTAAGACGATCATGACAAAGGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS TCA 72 bp GGGTCTTTCACGAAGCCAATGAGAAATTTCAGCAGCTaGGGATTCAGAAACAAAAGAATATCATGTGCTAAT +
Preference number: 6 (lower is better)
Translates to: GSFTKPMRNFSS*GFRNKRISCAN
Trigger: ATTAGCACATGATATTCTTTTGTTTCTGAATCCTCAGCTGCTGAAATTTCTCATTGGCTTCGTGAAAGACCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS CAA 72 bp TTTGTCATGATCGTCTTAAACTTGCTGGTGAGTGACTaGGCTTTAAGATTTTCTTCAATATCCCACACATCT +
Preference number: 6 (lower is better)
Translates to: FVMIVLNLLVSD*ALRFSSISHTS
Trigger: AGATGTGTGGGATATTGAAGAAAATCTTAAAGCCAAGTCACTCACCAGCAAGTTTAAGACGATCATGACAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6
CDS CCA 72 bp ATTTTCTTCAATATCCCACACATCTTCTATTGTCAATaGATGCTTGTAACCTTTCAGAACAGTGCTGTCATA +
Preference number: 6 (lower is better)
Translates to: IFFNIPHIFYCQ*MLVTFQNSAVI
Trigger: TATGACAGCACTGTTCTGAAAGGTTACAAGCATCCATTGACAATAGAAGATGTGTGGGATATTGAAGAAAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026208.6