RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ABCC12 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000036872

Ensembl transcript IDs: ENSMUST00000080115.10, ENSMUST00000129898.8, ENSMUST00000131423.8, ENSMUST00000131806.8, ENSMUST00000152438.2, ENSMUST00000156066.8, ENSMUST00000156610.8

Found 748 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GACGCCCAGACCCTGTATGGAGGAGGTGATGTGAGAGAACCAAGGTaGCCGGCTGATGTTCTCCACCTGCTTGAGCTCCTGAACTCCTCG +
Preference number: 1 (lower is better)
Translates to: DAQTLYGGGDVREPR*PADVLHLLELLNSS
Trigger: CGAGGAGTTCAGGAGCTCAAGCAGGTGGAGAACATCAGCCGGTCACCTTGGTTCTCTCACATCACCTCCTCCATACAGGGTCTGGGCGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000129898.8
ENSMUST00000131806.8
ENSMUST00000156610.8
3UTR CCA 90 bp GTGTCTTGCAGGGTCTGGTCGACGTTGCAGGCTGTCTTATTGTTCTaGGATGCACAGACGACCTGGGAACCCCTGTCTAACCAGATCCCC +
Preference number: 1 (lower is better)
Translates to: VSCRVWSTLQAVLLF*DAQTTWEPLSNQIP
Trigger: GGGGATCTGGTTAGACAGGGGTTCCCAGGTCGTCTGTGCATCCCAGAACAATAAGACAGCCTGCAACGTCGACCAGACCCTGCAAGACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000129898.8
ENSMUST00000131806.8
ENSMUST00000156610.8
3UTR TCA 90 bp AAAGGTCAGTCCCTCCCTGGCTCCGTTGAATTCTTTCAAGTGGGCTaGATCCCTGGGCGTTGCCTCGTAGCCCCCTTCCTTGCCTTTACT +
Preference number: 1 (lower is better)
Translates to: KGQSLPGSVEFFQVG*IPGRCLVAPFLAFT
Trigger: AGTAAAGGCAAGGAAGGGGGCTACGAGGCAACGCCCAGGGATTCAGCCCACTTGAAAGAATTCAACGGAGCCAGGGAGGGACTGACCTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000129898.8
3UTR CCA 90 bp AGGCTGGTGAACAACTGTATAGATTCATTACTGAGCCAAGGGAGATaGCTGTGGGAGGTCATGTGCTCCATGGGTGGGAGGGGCTGTGGC +
Preference number: 1 (lower is better)
Translates to: RLVNNCIDSLLSQGR*LWEVMCSMGGRGCG
Trigger: GCCACAGCCCCTCCCACCCATGGAGCACATGACCTCCCACAGCCATCTCCCTTGGCTCAGTAATGAATCTATACAGTTGTTCACCAGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000129898.8
3UTR GCA 90 bp CTCTGGATCCTTGAATTGCAGTCCCCGGAGGTTGTGGATAAGCTTTaGATAGCGCCCCCTCTCTTCCATCAACTCCTTGTGGGTGCCCTT +
Preference number: 1 (lower is better)
Translates to: LWILELQSPEVVDKL*IAPPLFHQLLVGAL
Trigger: AAGGGCACCCACAAGGAGTTGATGGAAGAGAGGGGGCGCTATGCAAAGCTTATCCACAACCTCCGGGGACTGCAATTCAAGGATCCAGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000156610.8
3UTR CCA 90 bp GGGTCCAAGTTGTACCTACAAACAGGACAGGATCCTGGGGGATCATaGTCAGCTTGGTTCGGAGGTCTTCCAGACCCACAGTGCAGATGT +
Preference number: 1 (lower is better)
Translates to: GSKLYLQTGQDPGGS*SAWFGGLPDPQCRC
Trigger: ACATCTGCACTGTGGGTCTGGAAGACCTCCGAACCAAGCTGACCATGATCCCCCAGGATCCTGTCCTGTTTGTAGGTACAACTTGGACCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000129898.8
3UTR TCA 90 bp GAACGGTGTTCAGGCGATGAGCGATGGTCAACACTGTGCAGCTTTTaGAGGCCTCCTTTATGGTGCTCTGAACAAGGGTGTCTGTCTTGG +
Preference number: 1 (lower is better)
Translates to: ERCSGDERWSTLCSF*RPPLWCSEQGCLSW
Trigger: CCAAGACAGACACCCTTGTTCAGAGCACCATAAAGGAGGCCTTCAAAAGCTGCACAGTGTTGACCATCGCTCATCGCCTGAACACCGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000129898.8
ENSMUST00000131806.8
ENSMUST00000156066.8
ENSMUST00000156610.8
3UTR GCA 90 bp GGGTTTTCAGAAGTGAGAGGCAGCTTCCAACCTACCAGCTTTGTCTaGACTCTTCACCATCCAGAACCAACCCTGAGTCTGCCAAGAGAG +
Preference number: 1 (lower is better)
Translates to: GFSEVRGSFQPTSFV*TLHHPEPTLSLPRE
Trigger: CTCTCTTGGCAGACTCAGGGTTGGTTCTGGATGGTGAAGAGTGCAGACAAAGCTGGTAGGTTGGAAGCTGCCTCTCACTTCTGAAAACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000156066.8
ENSMUST00000156610.8
3UTR CCA 90 bp TGTACCTTACTGTACCTACAAACAGGACAGGATCCTGGGGGATCATaGTCAGCTTGGTTCGGAGGTCTTCCAGACCCACAGTGCAGATGT +
Preference number: 1 (lower is better)
Translates to: CTLLYLQTGQDPGGS*SAWFGGLPDPQCRC
Trigger: ACATCTGCACTGTGGGTCTGGAAGACCTCCGAACCAAGCTGACCATGATCCCCCAGGATCCTGTCCTGTTTGTAGGTACAGTAAGGTACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000131806.8
ENSMUST00000156610.8
3UTR TCA 90 bp AACCTACCAGCTTTGTCTGCACTCTTCACCATCCAGAACCAACCCTaGGTCTGCCAAGAGAGATGGCCAGAAGAACAAGGGACACATCTC +
Preference number: 1 (lower is better)
Translates to: NLPALSALFTIQNQP*VCQERWPEEQGTHL
Trigger: GAGATGTGTCCCTTGTTCTTCTGGCCATCTCTCTTGGCAGACTCAGGGTTGGTTCTGGATGGTGAAGAGTGCAGACAAAGCTGGTAGGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000156066.8
ENSMUST00000156610.8
3UTR TCA 90 bp CAGGAACACAGGTCAAAATGTACTCCCTCAGTAGCTCTGCGGAGGTaGACTTGGCTTGGGTCTCTGTTCCTGTTCGCACACACACTTGAA +
Preference number: 1 (lower is better)
Translates to: QEHRSKCTPSVALRR*TWLGSLFLFAHTLE
Trigger: TTCAAGTGTGTGTGCGAACAGGAACAGAGACCCAAGCCAAGTTCACCTCCGCAGAGCTACTGAGGGAGTACATTTTGACCTGTGTTCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000129898.8
ENSMUST00000131806.8
ENSMUST00000156610.8
3UTR TCA 90 bp TCCATCACCAGGACAAGGTCACAGTTGAGAACGGTGTTCAGGCGATaGGCGATGGTCAACACTGTGCAGCTTTTGAAGGCCTCCTTTATG +
Preference number: 1 (lower is better)
Translates to: SITRTRSQLRTVFRR*AMVNTVQLLKASFM
Trigger: CATAAAGGAGGCCTTCAAAAGCTGCACAGTGTTGACCATCGCTCATCGCCTGAACACCGTTCTCAACTGTGACCTTGTCCTGGTGATGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000129898.8
ENSMUST00000131806.8
ENSMUST00000156066.8
ENSMUST00000156610.8
3UTR TCA 90 bp CCTTGTGGGTGCCCTTTTCACAGATCTCTCCATCTTCTAACAGAATaGCCTCATCACAAGACTCCAGGAACCAGAGAGGAGCAGGTAGCA +
Preference number: 1 (lower is better)
Translates to: PCGCPFHRSLHLLTE*PHHKTPGTREEQVA
Trigger: TGCTACCTGCTCCTCTCTGGTTCCTGGAGTCTTGTGATGAGGTCATTCTGTTAGAAGATGGAGAGATCTGTGAAAAGGGCACCCACAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156610.8
3UTR CCA 90 bp ATTCTGAGAGCAAACCACCTGAGCGCGCAGTTGAAGTACAGGAGGTaGCTGGAGTTTTCGTCGTTGAGTGTCTTAAACTTGCTGATGCAG +
Preference number: 1 (lower is better)
Translates to: ILRANHLSAQLKYRR*LEFSSLSVLNLLMQ
Trigger: CTGCATCAGCAAGTTTAAGACACTCAACGACGAAAACTCCAGCCACCTCCTGTACTTCAACTGCGCGCTCAGGTGGTTTGCTCTCAGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000129898.8
ENSMUST00000131806.8
ENSMUST00000156610.8
3UTR TCA 90 bp GAGAACCAAGGTGACCGGCTGATGTTCTCCACCTGCTTGAGCTCCTaGACTCCTCGATGGAAGATGCGTAAAAGAATGAGGAAGATTACA +
Preference number: 1 (lower is better)
Translates to: ENQGDRLMFSTCLSS*TPRWKMRKRMRKIT
Trigger: TGTAATCTTCCTCATTCTTTTACGCATCTTCCATCGAGGAGTTCAGGAGCTCAAGCAGGTGGAGAACATCAGCCGGTCACCTTGGTTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000129898.8
ENSMUST00000131806.8
ENSMUST00000156610.8
3UTR TCA 90 bp ATGGTCAACACTGTGCAGCTTTTGAAGGCCTCCTTTATGGTGCTCTaGACAAGGGTGTCTGTCTTGGAATCCATGGAGGCAGTAGCTTCA +
Preference number: 1 (lower is better)
Translates to: MVNTVQLLKASFMVL*TRVSVLESMEAVAS
Trigger: TGAAGCTACTGCCTCCATGGATTCCAAGACAGACACCCTTGTTCAGAGCACCATAAAGGAGGCCTTCAAAAGCTGCACAGTGTTGACCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000129898.8
ENSMUST00000131806.8
ENSMUST00000156066.8
ENSMUST00000156610.8
3UTR CCA 90 bp CAGACACCATGCTTGCTATGTAAACCAACTGGTACATGTGGTGTTTaGTGTCTTGCAGGGTCTGGTCGACGTTGCAGGCTGTCTTATTGT +
Preference number: 1 (lower is better)
Translates to: QTPCLLCKPTGTCGV*CLAGSGRRCRLSYC
Trigger: ACAATAAGACAGCCTGCAACGTCGACCAGACCCTGCAAGACACCAAACACCACATGTACCAGTTGGTTTACATAGCAAGCATGGTGTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000129898.8
ENSMUST00000131806.8
ENSMUST00000156610.8
3UTR CCA 90 bp ATCCGAGGAGTAGCAAACATCACTCTGAGTTATCAGTACCCACACTaGGGCTACTGGGTAGGTCTTTCCTCTGATCCTCATAGAAGACCT +
Preference number: 1 (lower is better)
Translates to: IRGVANITLSYQYPH*GYWVGLSSDPHRRP
Trigger: AGGTCTTCTATGAGGATCAGAGGAAAGACCTACCCAGTAGCCCCAGTGTGGGTACTGATAACTCAGAGTGATGTTTGCTACTCCTCGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129898.8
3UTR TCA 90 bp AGAGACACAAAACCAGGAAGGAGACCAGGTACCCTCCAGAAGCCTTaGTATACGTGTGATATGTTTTCCAGGTCACGATTCCTTCTTGGG +
Preference number: 1 (lower is better)
Translates to: RDTKPGRRPGTLQKP*YTCDMFSRSRFLLG
Trigger: CCCAAGAAGGAATCGTGACCTGGAAAACATATCACACGTATATCAAGGCTTCTGGAGGGTACCTGGTCTCCTTCCTGGTTTTGTGTCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000129898.8
ENSMUST00000131806.8
ENSMUST00000156610.8
3UTR CCA 90 bp TCATCTGGGTCCCAACTCAGGAGAGGATGCTGCCCTCATTTAGAGTaGGTTTTCCTTGTTGGCAACTGTATCTGGGAATGTTCTCAGAAA +
Preference number: 1 (lower is better)
Translates to: SSGSQLRRGCCPHLE*VFLVGNCIWECSQK
Trigger: TTTCTGAGAACATTCCCAGATACAGTTGCCAACAAGGAAAACCCACTCTAAATGAGGGCAGCATCCTCTCCTGAGTTGGGACCCAGATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000152438.2
3UTR GCA 90 bp TTGGAAAATGACGCTGTTGGGCTCTGGAAATACAGTGGCAATGTCTaGTCTAGAAAGACCCAGAAATACAAAGAGGGCCTTCAATCCGAG +
Preference number: 1 (lower is better)
Translates to: LENDAVGLWKYSGNV*SRKTQKYKEGLQSE
Trigger: CTCGGATTGAAGGCCCTCTTTGTATTTCTGGGTCTTTCTAGAGCAGACATTGCCACTGTATTTCCAGAGCCCAACAGCGTCATTTTCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000129898.8
3UTR CCA 90 bp AAGAAGCTCATTGGGCTCCTGACGATCTTGTTAAATACTCTGTTGTaGAGAGAGGAAGACGCCATCAGTGTAGTGTTGGTGAAGGTAAAG +
Preference number: 1 (lower is better)
Translates to: KKLIGLLTILLNTLL*REEDAISVVLVKVK
Trigger: CTTTACCTTCACCAACACTACACTGATGGCGTCTTCCTCTCTCCACAACAGAGTATTTAACAAGATCGTCAGGAGCCCAATGAGCTTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000129898.8
ENSMUST00000131806.8
ENSMUST00000156610.8
3UTR CCA 90 bp TGCTGCCCTCATTTAGAGTGGGTTTTCCTTGTTGGCAACTGTATCTaGGAATGTTCTCAGAAAGAACCCAGTAGAGGGTTTAGACCTTCA +
Preference number: 1 (lower is better)
Translates to: CCPHLEWVFLVGNCI*ECSQKEPSRGFRPS
Trigger: TGAAGGTCTAAACCCTCTACTGGGTTCTTTCTGAGAACATTCCCAGATACAGTTGCCAACAAGGAAAACCCACTCTAAATGAGGGCAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000152438.2
3UTR GCA 90 bp GGTAAAGCCTTTGATGATGCCAAACATCAACACAGACACCATGCTTaGTATGTAAACCAACTGGTACATGTGGTGTTTGGTGTCTTGCAG +
Preference number: 1 (lower is better)
Translates to: GKAFDDAKHQHRHHA*YVNQLVHVVFGVLQ
Trigger: CTGCAAGACACCAAACACCACATGTACCAGTTGGTTTACATAGCAAGCATGGTGTCTGTGTTGATGTTTGGCATCATCAAAGGCTTTACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000129898.8
ENSMUST00000131806.8
ENSMUST00000156610.8
3UTR TCA 90 bp TCTCTTATAGGAGTATTACTGAGAAATGACTCACAGAGAAGTGGATaGCTCAAAGGTTATTGCATCACCCAAAAGACCACCCCAGCATGG +
Preference number: 1 (lower is better)
Translates to: SLIGVLLRNDSQRSG*LKGYCITQKTTPAW
Trigger: CCATGCTGGGGTGGTCTTTTGGGTGATGCAATAACCTTTGAGTCATCCACTTCTCTGTGAGTCATTTCTCAGTAATACTCCTATAAGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000129898.8
3UTR TCA 90 bp AACAGTGAGTTTATTGAGGTCTCTTATAGGAGTATTACTGAGAAATaGCTCACAGAGAAGTGGATGACTCAAAGGTTATTGCATCACCCA +
Preference number: 1 (lower is better)
Translates to: NSEFIEVSYRSITEK*LTEKWMTQRLLHHP
Trigger: TGGGTGATGCAATAACCTTTGAGTCATCCACTTCTCTGTGAGTCATTTCTCAGTAATACTCCTATAAGAGACCTCAATAAACTCACTGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129898.8
3UTR-3UTR CCA 90 bp GAACAAGGGACACATCTCAGCCCCAGCTCACCATGTGCTCCATGGGTGGGAGGGCATGTGCTCCATGGGTaGGAGGGGCTGTGGCCAGGG +
Preference number: 2 (lower is better)
Translates to: EQGTHLSPSSPCAPWVGGHVLHG*EGLWPG
Trigger: CCCTGGCCACAGCCCCTCCCACCCATGGAGCACATG...CCCTCCCACCCATGGAGCACATGGTGAGCTGGGGCTGAGATGTGTCCCTTGTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000156066.8
ENSMUST00000156610.8
3UTR-3UTR GCA 90 bp GGCCAGAAGAACAAGGGACACATCTCAGCCCCAGCTCACCATGTGCTCCATGGGCCCCAGCTCACCATGTaGTCCATGGGTGGGAGGGGC +
Preference number: 2 (lower is better)
Translates to: GQKNKGHISAPAHHVLHGPQLTM*SMGGRG
Trigger: GCCCCTCCCACCCATGGAGCACATGGTGAGCTGGGG...CCCATGGAGCACATGGTGAGCTGGGGCTGAGATGTGTCCCTTGTTCTTCTGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000156066.8
ENSMUST00000156610.8
3UTR-3UTR CCA 90 bp GTATTGGTGAGGACACGTGAGGGACCCTTGGGGTTTTCAGAAGTGAGAGGCAGCGGGTGGGAGGGGCTGTaGCCAGGGCTGCTTGGCTCC +
Preference number: 2 (lower is better)
Translates to: VLVRTREGPLGFSEVRGSGWEGL*PGLLGS
Trigger: GGAGCCAAGCAGCCCTGGCCACAGCCCCTCCCACCC...GCTGCCTCTCACTTCTGAAAACCCCAAGGGTCCCTCACGTGTCCTCACCAATAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000156066.8
ENSMUST00000156610.8
3UTR-3UTR CCA 90 bp CCCACAGTGCAGATGTCCACCTCGTCAATGATGATGGTACCAGAGGCTGGTTCCGGGTGGGAGGGGCTGTaGCCAGGGCTGCTTGGCTCC +
Preference number: 2 (lower is better)
Translates to: PTVQMSTSSMMMVPEAGSGWEGL*PGLLGS
Trigger: GGAGCCAAGCAGCCCTGGCCACAGCCCCTCCCACCC...GGAACCAGCCTCTGGTACCATCATCATTGACGAGGTGGACATCTGCACTGTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000129898.8
ENSMUST00000131806.8
ENSMUST00000156610.8
3UTR-3UTR GCA 90 bp CTTGAACGTTATCTCCCCTCGGCTCGGCCAGTCTTTGGGACAGGTCCCCACTTTCCCCAGCTCACCATGTaGTCCATGGGTGGGAGGGGC +
Preference number: 2 (lower is better)
Translates to: LERYLPSARPVFGTGPHFPQLTM*SMGGRG
Trigger: GCCCCTCCCACCCATGGAGCACATGGTGAGCTGGGG...AAAGTGGGGACCTGTCCCAAAGACTGGCCGAGCCGAGGGGAGATAACGTTCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000131806.8
ENSMUST00000156610.8
3UTR-3UTR CCA 90 bp CTGTGGCCAGGGCTGCTTGGCTCCATGGTCGGGCTTCTGTTCTCACATGTCCATAGGTCATGTGCTCCATaGGTGGGAGGGGCTGTGGCC +
Preference number: 2 (lower is better)
Translates to: LWPGLLGSMVGLLFSHVHRSCAP*VGGAVA
Trigger: GGCCACAGCCCCTCCCACCCATGGAGCACATGACCT...ATGGACATGTGAGAACAGAAGCCCGACCATGGAGCCAAGCAGCCCTGGCCACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000129898.8
3UTR-3UTR GCA 90 bp TTGGTGAGGACACGTGAGGGACCCTTGGGGTTTTCAGAAGTGAGAGGCAGCTTCCCCCAGCTCACCATGTaGTCCATGGGTGGGAGGGGC +
Preference number: 2 (lower is better)
Translates to: LVRTREGPLGFSEVRGSFPQLTM*SMGGRG
Trigger: GCCCCTCCCACCCATGGAGCACATGGTGAGCTGGGG...GAAGCTGCCTCTCACTTCTGAAAACCCCAAGGGTCCCTCACGTGTCCTCACCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000156066.8
ENSMUST00000156610.8
3UTR-3UTR CCA 90 bp AGAAGAACAAGGGACACATCTCAGCCCCAGCTCACCATGTGCTCCATGGGTGGGGTGGCCAGGGCTGCTTaGCTCCATGGTCGGGCTTCT +
Preference number: 2 (lower is better)
Translates to: RRTRDTSQPQLTMCSMGGVARAA*LHGRAS
Trigger: AGAAGCCCGACCATGGAGCCAAGCAGCCCTGGCCAC...CCCACCCATGGAGCACATGGTGAGCTGGGGCTGAGATGTGTCCCTTGTTCTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000156066.8
ENSMUST00000156610.8
3UTR-3UTR CCA 90 bp CAACCTACCAGCTTTGTCTGCACTCTTCACCATCCAGAACCAACCCTGAGTCTGGGGTGGGAGGGGCTGTaGCCAGGGCTGCTTGGCTCC +
Preference number: 2 (lower is better)
Translates to: QPTSFVCTLHHPEPTLSLGWEGL*PGLLGS
Trigger: GGAGCCAAGCAGCCCTGGCCACAGCCCCTCCCACCC...CAGACTCAGGGTTGGTTCTGGATGGTGAAGAGTGCAGACAAAGCTGGTAGGTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000156066.8
ENSMUST00000156610.8
3UTR-3UTR CCA 90 bp CAGCTTCCAACCTACCAGCTTTGTCTGCACTCTTCACCATCCAGAACCAACCCTGGGTGGGAGGGGCTGTaGCCAGGGCTGCTTGGCTCC +
Preference number: 2 (lower is better)
Translates to: QLPTYQLCLHSSPSRTNPGWEGL*PGLLGS
Trigger: GGAGCCAAGCAGCCCTGGCCACAGCCCCTCCCACCC...AGGGTTGGTTCTGGATGGTGAAGAGTGCAGACAAAGCTGGTAGGTTGGAAGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000156066.8
ENSMUST00000156610.8
3UTR-3UTR CCA 90 bp AGAGGCAGCTTCCAACCTACCAGCTTTGTCTGCACTCTTCACCATCCAGAACCAGGGTGGGAGGGGCTGTaGCCAGGGCTGCTTGGCTCC +
Preference number: 2 (lower is better)
Translates to: RGSFQPTSFVCTLHHPEPGWEGL*PGLLGS
Trigger: GGAGCCAAGCAGCCCTGGCCACAGCCCCTCCCACCC...TGGTTCTGGATGGTGAAGAGTGCAGACAAAGCTGGTAGGTTGGAAGCTGCCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000156066.8
ENSMUST00000156610.8
3UTR-3UTR CCA 90 bp AGGACACGTGAGGGACCCTTGGGGTTTTCAGAAGTGAGAGGCAGCTTCCAACCTCATGTGCTCCATGGGTaGGAGGGGCTGTGGCCAGGG +
Preference number: 2 (lower is better)
Translates to: RTREGPLGFSEVRGSFQPHVLHG*EGLWPG
Trigger: CCCTGGCCACAGCCCCTCCCACCCATGGAGCACATG...AGGTTGGAAGCTGCCTCTCACTTCTGAAAACCCCAAGGGTCCCTCACGTGTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000156066.8
ENSMUST00000156610.8
3UTR-3UTR CCA 90 bp CCCACAGTGCAGATGTCCACCTCGTCAATGATGATGGTACCAGAGGCTGGTTCCCATGTGCTCCATGGGTaGGAGGGGCTGTGGCCAGGG +
Preference number: 2 (lower is better)
Translates to: PTVQMSTSSMMMVPEAGSHVLHG*EGLWPG
Trigger: CCCTGGCCACAGCCCCTCCCACCCATGGAGCACATG...GGAACCAGCCTCTGGTACCATCATCATTGACGAGGTGGACATCTGCACTGTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000129898.8
ENSMUST00000131806.8
ENSMUST00000156610.8
3UTR-3UTR CCA 90 bp CTGTATAGATTCATTACTGAGCCAAGGGAGATGGCTGTGGGAGGTCATGTGCTCGGGTGGGAGGGGCTGTaGCCAGGGCTGCTTGGCTCC +
Preference number: 2 (lower is better)
Translates to: LYRFITEPREMAVGGHVLGWEGL*PGLLGS
Trigger: GGAGCCAAGCAGCCCTGGCCACAGCCCCTCCCACCC...GAGCACATGACCTCCCACAGCCATCTCCCTTGGCTCAGTAATGAATCTATACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000129898.8
3UTR-3UTR CCA 90 bp CACTCTTCACCATCCAGAACCAACCCTGAGTCTGCCAAGAGAGATGGCCAGAAGCATGTGCTCCATGGGTaGGAGGGGCTGTGGCCAGGG +
Preference number: 2 (lower is better)
Translates to: HSSPSRTNPESAKRDGQKHVLHG*EGLWPG
Trigger: CCCTGGCCACAGCCCCTCCCACCCATGGAGCACATG...CTTCTGGCCATCTCTCTTGGCAGACTCAGGGTTGGTTCTGGATGGTGAAGAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000156066.8
ENSMUST00000156610.8
3UTR-3UTR CCA 90 bp CAGGACAAGGTCACAGTTGAGAACGGTGTTCAGGCGATGAGCGATGGTCAACACCATGTGCTCCATGGGTaGGAGGGGCTGTGGCCAGGG +
Preference number: 2 (lower is better)
Translates to: QDKVTVENGVQAMSDGQHHVLHG*EGLWPG
Trigger: CCCTGGCCACAGCCCCTCCCACCCATGGAGCACATG...GTGTTGACCATCGCTCATCGCCTGAACACCGTTCTCAACTGTGACCTTGTCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000129898.8
ENSMUST00000131806.8
ENSMUST00000156066.8
ENSMUST00000156610.8
3UTR-3UTR CCA 90 bp CCAAGAGAGATGGCCAGAAGAACAAGGGACACATCTCAGCCCCAGCTCACCATGTCACCATGTGCTCCATaGGTGGGAGGGGCTGTGGCC +
Preference number: 2 (lower is better)
Translates to: PREMARRTRDTSQPQLTMSPCAP*VGGAVA
Trigger: GGCCACAGCCCCTCCCACCCATGGAGCACATGGTGA...CATGGTGAGCTGGGGCTGAGATGTGTCCCTTGTTCTTCTGGCCATCTCTCTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000156066.8
ENSMUST00000156610.8
3UTR-3UTR TCA 90 bp AGAGCAAACCACCTGAGCGCGCAGTTGAAGTACAGGAGGTGGCTGGAGTTTTCGGGGATTCAGTCTGGATaGGCTGGTGAGCGGGAGAGG +
Preference number: 2 (lower is better)
Translates to: RANHLSAQLKYRRWLEFSGIQSG*AGERER
Trigger: CCTCTCCCGCTCACCAGCTCATCCAGACTGAATCCC...CGAAAACTCCAGCCACCTCCTGTACTTCAACTGCGCGCTCAGGTGGTTTGCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000131806.8
3UTR-3UTR TCA 90 bp GTTGCAGGCTGTCTTATTGTTCTGGGATGCACAGACGACCTGGGAACCCCTGTCGGGATTCAGTCTGGATaGGCTGGTGAGCGGGAGCGT +
Preference number: 2 (lower is better)
Translates to: VAGCLIVLGCTDDLGTPVGIQSG*AGERER
Trigger: ACGCTCCCGCTCACCAGCTCATCCAGACTGAATCCC...GACAGGGGTTCCCAGGTCGTCTGTGCATCCCAGAACAATAAGACAGCCTGCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000129898.8
ENSMUST00000156610.8
3UTR-3UTR CCA 90 bp GGCAGCTTCCAACCTACCAGCTTTGTCTGCACTCTTCACCATCCAGAACCAACCTCACCATGTGCTCCATaGGTGGGAGGGGCTGTGGCC +
Preference number: 2 (lower is better)
Translates to: GSFQPTSFVCTLHHPEPTSPCAP*VGGAVA
Trigger: GGCCACAGCCCCTCCCACCCATGGAGCACATGGTGA...GGTTGGTTCTGGATGGTGAAGAGTGCAGACAAAGCTGGTAGGTTGGAAGCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000156066.8
ENSMUST00000156610.8
3UTR-3UTR CCA 90 bp TTCCAGACCCACAGTGCAGATGTCCACCTCGTCAATGATGATGGTACCAGAGGCTCACCATGTGCTCCATaGGTGGGAGGGGCTGTGGCC +
Preference number: 2 (lower is better)
Translates to: FQTHSADVHLVNDDGTRGSPCAP*VGGAVA
Trigger: GGCCACAGCCCCTCCCACCCATGGAGCACATGGTGA...GCCTCTGGTACCATCATCATTGACGAGGTGGACATCTGCACTGTGGGTCTGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000131806.8
ENSMUST00000156610.8
3UTR-3UTR TCA 90 bp TTCCAGACCCACAGTGCAGATGTCCACCTCGTCAATGATGATGGTACCAGAGGCGCGTCTTCATCCCTCTaGGCTGGGCTCTCCTTCAGG +
Preference number: 2 (lower is better)
Translates to: FQTHSADVHLVNDDGTRGASSSL*AGLSFR
Trigger: CCTGAAGGAGAGCCCAGCTCAGAGGGATGAAGACGC...GCCTCTGGTACCATCATCATTGACGAGGTGGACATCTGCACTGTGGGTCTGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156610.8
3UTR-3UTR CCA 90 bp TCTTCACCATCCAGAACCAACCCTGAGTCTGCCAAGAGAGATGGCCAGAAGAACGTGGCCAGGGCTGCTTaGCTCCATGGTCGGGCTTCT +
Preference number: 2 (lower is better)
Translates to: SSPSRTNPESAKRDGQKNVARAA*LHGRAS
Trigger: AGAAGCCCGACCATGGAGCCAAGCAGCCCTGGCCAC...GTTCTTCTGGCCATCTCTCTTGGCAGACTCAGGGTTGGTTCTGGATGGTGAAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000156066.8
ENSMUST00000156610.8
3UTR-3UTR CCA 90 bp ACTCTTCACCATCCAGAACCAACCCTGAGTCTGCCAAGAGAGATGGCCAGAAGATCACCATGTGCTCCATaGGTGGGAGGGGCTGTGGCC +
Preference number: 2 (lower is better)
Translates to: TLHHPEPTLSLPREMARRSPCAP*VGGAVA
Trigger: GGCCACAGCCCCTCCCACCCATGGAGCACATGGTGA...TCTTCTGGCCATCTCTCTTGGCAGACTCAGGGTTGGTTCTGGATGGTGAAGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000156066.8
ENSMUST00000156610.8
3UTR-3UTR CCA 90 bp GAACAAGGGACACATCTCAGCCCCAGCTCACCATGTGCTCCATGGGTGGGAGGGGTCTGCCAAGAGAGATaGCCAGAAGAACAAGGGACA +
Preference number: 2 (lower is better)
Translates to: EQGTHLSPSSPCAPWVGGVCQER*PEEQGT
Trigger: TGTCCCTTGTTCTTCTGGCCATCTCTCTTGGCAGAC...CCCTCCCACCCATGGAGCACATGGTGAGCTGGGGCTGAGATGTGTCCCTTGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000156066.8
ENSMUST00000156610.8
3UTR CAA 90 bp ACTGTACCTACAAACAGGACAGGATCCTGGGGGATCATGGTCAGCTaGGTTCGGAGGTCTTCCAGACCCACAGTGCAGATGTCCACCTCG +
Preference number: 2 (lower is better)
Translates to: TVPTNRTGSWGIMVS*VRRSSRPTVQMSTS
Trigger: CGAGGTGGACATCTGCACTGTGGGTCTGGAAGACCTCCGAACCAAGCTGACCATGATCCCCCAGGATCCTGTCCTGTTTGTAGGTACAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000131806.8
ENSMUST00000156610.8
3UTR CAA 90 bp GTTGTACCTACAAACAGGACAGGATCCTGGGGGATCATGGTCAGCTaGGTTCGGAGGTCTTCCAGACCCACAGTGCAGATGTCCACCTCG +
Preference number: 2 (lower is better)
Translates to: VVPTNRTGSWGIMVS*VRRSSRPTVQMSTS
Trigger: CGAGGTGGACATCTGCACTGTGGGTCTGGAAGACCTCCGAACCAAGCTGACCATGATCCCCCAGGATCCTGTCCTGTTTGTAGGTACAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000129898.8
3UTR-3UTR GCA 90 bp GTGGCCAGGGCTGCTTGGCTCCATGGTCGGGCTTCTGTTCTCACATGTCCATCGCCTACCAGCTTTGTCTaGACTCTTCACCATCCAGAA +
Preference number: 2 (lower is better)
Translates to: VARAAWLHGRASVLTCPSPTSFV*TLHHPE
Trigger: TTCTGGATGGTGAAGAGTGCAGACAAAGCTGGTAGG...CGATGGACATGTGAGAACAGAAGCCCGACCATGGAGCCAAGCAGCCCTGGCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000156066.8
ENSMUST00000156610.8
3UTR-3UTR CCA 90 bp CAAATCACCCACAGGACCTTTACAGTCCAACCTCTGCAGCTAGTAACATCGCAACATGTGCTCCATGGGTaGGAGGGGCTGTGGCCAGGG +
Preference number: 2 (lower is better)
Translates to: QITHRTFTVQPLQLVTSQHVLHG*EGLWPG
Trigger: CCCTGGCCACAGCCCCTCCCACCCATGGAGCACATG...TTGCGATGTTACTAGCTGCAGAGGTTGGACTGTAAAGGTCCTGTGGGTGATTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000129898.8
ENSMUST00000131806.8
ENSMUST00000156066.8
ENSMUST00000156610.8
3UTR-3UTR CCA 90 bp CTGTGGCCAGGGCTGCTTGGCTCCATGGTCGGGCTTCTGTTCTCACATGTCCATGTCTGCCAAGAGAGATaGCCAGAAGAACAAGGGACA +
Preference number: 2 (lower is better)
Translates to: LWPGLLGSMVGLLFSHVHVCQER*PEEQGT
Trigger: TGTCCCTTGTTCTTCTGGCCATCTCTCTTGGCAGAC...ATGGACATGTGAGAACAGAAGCCCGACCATGGAGCCAAGCAGCCCTGGCCACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000156066.8
ENSMUST00000156610.8
3UTR-3UTR TCA 90 bp TTCCAGACCCACAGTGCAGATGTCCACCTCGTCAATGATGATGGTACCAGAGGCGTGAGAGAACCAAGGTaGCCGGCTGATGTTCTCCAC +
Preference number: 2 (lower is better)
Translates to: FQTHSADVHLVNDDGTRGVREPR*PADVLH
Trigger: GTGGAGAACATCAGCCGGTCACCTTGGTTCTCTCAC...GCCTCTGGTACCATCATCATTGACGAGGTGGACATCTGCACTGTGGGTCTGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000129898.8
ENSMUST00000131806.8
ENSMUST00000156610.8
3UTR-3UTR CCA 90 bp CTCAGACATTATGTAGTATTGGTGAGGACACGTGAGGGACCCTTGGGGTTTTCAGTGGCCAGGGCTGCTTaGCTCCATGGTCGGGCTTCT +
Preference number: 2 (lower is better)
Translates to: LRHYVVLVRTREGPLGFSVARAA*LHGRAS
Trigger: AGAAGCCCGACCATGGAGCCAAGCAGCCCTGGCCAC...TGAAAACCCCAAGGGTCCCTCACGTGTCCTCACCAATACTACATAATGTCTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000156066.8
ENSMUST00000156610.8
3UTR-3UTR CCA 90 bp TCTGCTCTAGAAAGACCCAGAAATACAAAGAGGGCCTTCAATCCGAGGAGTAGCGTGGCCAGGGCTGCTTaGCTCCATGGTCGGGCTTCT +
Preference number: 2 (lower is better)
Translates to: SALERPRNTKRAFNPRSSVARAA*LHGRAS
Trigger: AGAAGCCCGACCATGGAGCCAAGCAGCCCTGGCCAC...GCTACTCCTCGGATTGAAGGCCCTCTTTGTATTTCTGGGTCTTTCTAGAGCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129898.8
3UTR-3UTR CCA 90 bp GAACAAGGGACACATCTCAGCCCCAGCTCACCATGTGCTCCATGGGTGGGAGGGTGTCATCTCCAGCCTTaGGCATTTTCCCATCTCATT +
Preference number: 2 (lower is better)
Translates to: EQGTHLSPSSPCAPWVGGCHLQP*AFSHLI
Trigger: AATGAGATGGGAAAATGCCCAAGGCTGGAGATGACA...CCCTCCCACCCATGGAGCACATGGTGAGCTGGGGCTGAGATGTGTCCCTTGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000156066.8
ENSMUST00000156610.8
3UTR-3UTR CCA 90 bp GATGATTTTCCGGAGCCCGTCCTTCCCACAATCCCAACTGTCTGCCCGCTTTGGGTCACGATTCCTTCTTaGGGGGATTCAGTCTGGATG +
Preference number: 2 (lower is better)
Translates to: DDFPEPVLPTIPTVCPLWVTIPS*GDSVWM
Trigger: CATCCAGACTGAATCCCCCCAAGAAGGAATCGTGAC...CCAAAGCGGGCAGACAGTTGGGATTGTGGGAAGGACGGGCTCCGGAAAATCATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000129898.8
ENSMUST00000131806.8
ENSMUST00000156610.8
3UTR-3UTR CCA 90 bp AAACTGCTGCAGAAAGTTCTCGGCGTGAAACGGCAGCCTCACGTCCAGCTCGTCGGTACATGTGGTGTTTaGTGTCTTGCAGGGTCTGGT +
Preference number: 2 (lower is better)
Translates to: KLLQKVLGVKRQPHVQLVGTCGV*CLAGSG
Trigger: ACCAGACCCTGCAAGACACCAAACACCACATGTACC...GACGAGCTGGACGTGAGGCTGCCGTTTCACGCCGAGAACTTTCTGCAGCAGTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000129898.8
ENSMUST00000131806.8
ENSMUST00000156610.8
3UTR-3UTR CCA 90 bp GTCCATTCTGAGAGCAAACCACCTGAGCGCGCAGTTGAAGTACAGGAGGTGGCTGAGGTGAACTTGGCTTaGGTCTCTGTTCCTGTTCGC +
Preference number: 2 (lower is better)
Translates to: VHSESKPPERAVEVQEVAEVNLA*VSVPVR
Trigger: GCGAACAGGAACAGAGACCCAAGCCAAGTTCACCTC...AGCCACCTCCTGTACTTCAACTGCGCGCTCAGGTGGTTTGCTCTCAGAATGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000129898.8
ENSMUST00000131806.8
ENSMUST00000156610.8
3UTR-3UTR CCA 90 bp CCAACCCTGAGTCTGCCAAGAGAGATGGCCAGAAGAACAAGGGACACATCTCAGGATCCTGGGGGATCATaGTCAGCTTGGTTCGGAGGT +
Preference number: 2 (lower is better)
Translates to: PTLSLPREMARRTRDTSQDPGGS*SAWFGG
Trigger: ACCTCCGAACCAAGCTGACCATGATCCCCCAGGATC...CTGAGATGTGTCCCTTGTTCTTCTGGCCATCTCTCTTGGCAGACTCAGGGTTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000131806.8
ENSMUST00000156610.8
3UTR-3UTR TCA 90 bp CCAAGAGAGATGGCCAGAAGAACAAGGGACACATCTCAGCCCCAGCTCACCATGTGGGGTTTTCAGAAGTaGGAGGCAGCTTCCAACCTA +
Preference number: 2 (lower is better)
Translates to: PREMARRTRDTSQPQLTMWGFQK*EAASNL
Trigger: TAGGTTGGAAGCTGCCTCTCACTTCTGAAAACCCCA...CATGGTGAGCTGGGGCTGAGATGTGTCCCTTGTTCTTCTGGCCATCTCTCTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000156066.8
ENSMUST00000156610.8
3UTR-3UTR TCA 90 bp CCAACCCTGAGTCTGCCAAGAGAGATGGCCAGAAGAACAAGGGACACATCTCAGACCTGCTTGAGCTCCTaGACTCCTCGATGGAAGATG +
Preference number: 2 (lower is better)
Translates to: PTLSLPREMARRTRDTSQTCLSS*TPRWKM
Trigger: CATCTTCCATCGAGGAGTTCAGGAGCTCAAGCAGGT...CTGAGATGTGTCCCTTGTTCTTCTGGCCATCTCTCTTGGCAGACTCAGGGTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000131806.8
ENSMUST00000156610.8
3UTR-3UTR TCA 90 bp GTTGTGGAGAGAGGAAGACGCCATCAGTGTAGTGTTGGTGAAGGTAAAGCCTTTGGGATTCAGTCTGGATaGGCTGGTGAGCGGGAGCGT +
Preference number: 2 (lower is better)
Translates to: VVERGRRHQCSVGEGKAFGIQSG*AGERER
Trigger: ACGCTCCCGCTCACCAGCTCATCCAGACTGAATCCC...AAAGGCTTTACCTTCACCAACACTACACTGATGGCGTCTTCCTCTCTCCACAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000129898.8
ENSMUST00000156610.8
3UTR-3UTR CCA 90 bp AATCACCCACAGGACCTTTACAGTCCAACCTCTGCAGCTAGTAACATCGCAAATGTGGCCAGGGCTGCTTaGCTCCATGGTCGGGCTTCT +
Preference number: 2 (lower is better)
Translates to: NHPQDLYSPTSAASNIANVARAA*LHGRAS
Trigger: AGAAGCCCGACCATGGAGCCAAGCAGCCCTGGCCAC...ATTTGCGATGTTACTAGCTGCAGAGGTTGGACTGTAAAGGTCCTGTGGGTGATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000129898.8
ENSMUST00000131806.8
ENSMUST00000156066.8
ENSMUST00000156610.8
3UTR-3UTR CCA 90 bp CAACCTACCAGCTTTGTCTGCACTCTTCACCATCCAGAACCAACCCTGAGTCTGGATGCACAGACGACCTaGGAACCCCTGTCTAACCAG +
Preference number: 2 (lower is better)
Translates to: QPTSFVCTLHHPEPTLSLDAQTT*EPLSNQ
Trigger: CTGGTTAGACAGGGGTTCCCAGGTCGTCTGTGCATC...CAGACTCAGGGTTGGTTCTGGATGGTGAAGAGTGCAGACAAAGCTGGTAGGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000131806.8
ENSMUST00000156610.8
3UTR-3UTR CCA 90 bp CTTGAACGTTATCTCCCCTCGGCTCGGCCAGTCTTTGGGACAGGTCCCCACTTTACCAACTGGTACATGTaGTGTTTGGTGTCTTGCAGG +
Preference number: 2 (lower is better)
Translates to: LERYLPSARPVFGTGPHFTNWYM*CLVSCR
Trigger: CCTGCAAGACACCAAACACCACATGTACCAGTTGGT...AAAGTGGGGACCTGTCCCAAAGACTGGCCGAGCCGAGGGGAGATAACGTTCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000129898.8
ENSMUST00000131806.8
ENSMUST00000156610.8
3UTR CAA 90 bp GGTCTCCACCATGGCTACATTGTAAATGTGCTCTGGATCCTTGAATaGCAGTCCCCGGAGGTTGTGGATAAGCTTTGCATAGCGCCCCCT +
Preference number: 2 (lower is better)
Translates to: GLHHGYIVNVLWILE*QSPEVVDKLCIAPP
Trigger: AGGGGGCGCTATGCAAAGCTTATCCACAACCTCCGGGGACTGCAATTCAAGGATCCAGAGCACATTTACAATGTAGCCATGGTGGAGACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000156610.8
3UTR-3UTR TCA 90 bp GGCCAGAAGAACAAGGGACACATCTCAGCCCCAGCTCACCATGTGCTCCATGGGACCCTCCAGAAGCCTTaGTATACGTGTGATATGTTT +
Preference number: 2 (lower is better)
Translates to: GQKNKGHISAPAHHVLHGTLQKP*YTCDMF
Trigger: AAACATATCACACGTATATCAAGGCTTCTGGAGGGT...CCCATGGAGCACATGGTGAGCTGGGGCTGAGATGTGTCCCTTGTTCTTCTGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000131806.8
ENSMUST00000156610.8
3UTR-3UTR TCA 90 bp CTTGGCTTGGGTCTCTGTTCCTGTTCGCACACACACTTGAAGCAATCCACTGAGACCTGCTTGAGCTCCTaGACTCCTCGATGGAAGATG +
Preference number: 2 (lower is better)
Translates to: LGLGLCSCSHTHLKQSTETCLSS*TPRWKM
Trigger: CATCTTCCATCGAGGAGTTCAGGAGCTCAAGCAGGT...CTCAGTGGATTGCTTCAAGTGTGTGTGCGAACAGGAACAGAGACCCAAGCCAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000129898.8
ENSMUST00000131806.8
ENSMUST00000156610.8
3UTR-3UTR TCA 90 bp CAACCTACCAGCTTTGTCTGCACTCTTCACCATCCAGAACCAACCCTGAGTCTGTGTTCTCCACCTGCTTaGGCTCCTGAACTCCTCGAT +
Preference number: 2 (lower is better)
Translates to: QPTSFVCTLHHPEPTLSLCSPPA*APELLD
Trigger: ATCGAGGAGTTCAGGAGCTCAAGCAGGTGGAGAACA...CAGACTCAGGGTTGGTTCTGGATGGTGAAGAGTGCAGACAAAGCTGGTAGGTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000131806.8
ENSMUST00000156610.8
3UTR-3UTR CCA 90 bp CAACTGTCTGCCCGCTTTGGATGTTCAAGTTCAGGCCATCAAGAACGAGAGGGGGTCTGCCAAGAGAGATaGCCAGAAGAACAAGGGACA +
Preference number: 2 (lower is better)
Translates to: QLSARFGCSSSGHQEREGVCQER*PEEQGT
Trigger: TGTCCCTTGTTCTTCTGGCCATCTCTCTTGGCAGAC...CCCCTCTCGTTCTTGATGGCCTGAACTTGAACATCCAAAGCGGGCAGACAGTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000131806.8
ENSMUST00000156610.8
3UTR-3UTR CCA 90 bp ATGGCCAGAAGAACAAGGGACACATCTCAGCCCCAGCTCACCATGTGCTCCATGTTGAAGTACAGGAGGTaGCTGGAGTTTTCGTCGTTG +
Preference number: 2 (lower is better)
Translates to: MARRTRDTSQPQLTMCSMLKYRR*LEFSSL
Trigger: CAACGACGAAAACTCCAGCCACCTCCTGTACTTCAA...CATGGAGCACATGGTGAGCTGGGGCTGAGATGTGTCCCTTGTTCTTCTGGCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000131806.8
ENSMUST00000156610.8
3UTR-3UTR CCA 90 bp CAACCTACCAGCTTTGTCTGCACTCTTCACCATCCAGAACCAACCCTGAGTCTGAACAGGACAGGATCCTaGGGGATCATGGTCAGCTTG +
Preference number: 2 (lower is better)
Translates to: QPTSFVCTLHHPEPTLSLNRTGS*GIMVSL
Trigger: CAAGCTGACCATGATCCCCCAGGATCCTGTCCTGTT...CAGACTCAGGGTTGGTTCTGGATGGTGAAGAGTGCAGACAAAGCTGGTAGGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000131806.8
ENSMUST00000156610.8
3UTR-3UTR TCA 90 bp CAACCTACCAGCTTTGTCTGCACTCTTCACCATCCAGAACCAACCCTGAGTCTGTGGGGTTTTCAGAAGTaGGAGGCAGCTTCCAACCTA +
Preference number: 2 (lower is better)
Translates to: QPTSFVCTLHHPEPTLSLWGFQK*EAASNL
Trigger: TAGGTTGGAAGCTGCCTCTCACTTCTGAAAACCCCA...CAGACTCAGGGTTGGTTCTGGATGGTGAAGAGTGCAGACAAAGCTGGTAGGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000156066.8
ENSMUST00000156610.8
3UTR-3UTR GCA 90 bp AAGGTCACAGTTGAGAACGGTGTTCAGGCGATGAGCGATGGTCAACACTGTGCAAGGCCTCCTTTATGGTaGTCTGAACAAGGGTGTCTG +
Preference number: 2 (lower is better)
Translates to: KVTVENGVQAMSDGQHCARPPLW*SEQGCL
Trigger: CAGACACCCTTGTTCAGAGCACCATAAAGGAGGCCT...TGCACAGTGTTGACCATCGCTCATCGCCTGAACACCGTTCTCAACTGTGACCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000129898.8
ENSMUST00000131806.8
ENSMUST00000156066.8
ENSMUST00000156610.8
3UTR-3UTR GCA 90 bp CAACCTACCAGCTTTGTCTGCACTCTTCACCATCCAGAACCAACCCTGAGTCTGAGGCCTCCTTTATGGTaGTCTGAACAAGGGTGTCTG +
Preference number: 2 (lower is better)
Translates to: QPTSFVCTLHHPEPTLSLRPPLW*SEQGCL
Trigger: CAGACACCCTTGTTCAGAGCACCATAAAGGAGGCCT...CAGACTCAGGGTTGGTTCTGGATGGTGAAGAGTGCAGACAAAGCTGGTAGGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000131806.8
ENSMUST00000156066.8
ENSMUST00000156610.8
3UTR-3UTR CCA 90 bp CTCTCAAATCACCCACAGGACCTTTACAGTCCAACCTCTGCAGCTAGTAACATCGATGCACAGACGACCTaGGAACCCCTGTCTAACCAG +
Preference number: 2 (lower is better)
Translates to: LSNHPQDLYSPTSAASNIDAQTT*EPLSNQ
Trigger: CTGGTTAGACAGGGGTTCCCAGGTCGTCTGTGCATC...GATGTTACTAGCTGCAGAGGTTGGACTGTAAAGGTCCTGTGGGTGATTTGAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000129898.8
ENSMUST00000131806.8
ENSMUST00000156610.8
3UTR-3UTR CCA 90 bp CCAACCCTGAGTCTGCCAAGAGAGATGGCCAGAAGAACAAGGGACACATCTCAGACCAACTGGTACATGTaGTGTTTGGTGTCTTGCAGG +
Preference number: 2 (lower is better)
Translates to: PTLSLPREMARRTRDTSQTNWYM*CLVSCR
Trigger: CCTGCAAGACACCAAACACCACATGTACCAGTTGGT...CTGAGATGTGTCCCTTGTTCTTCTGGCCATCTCTCTTGGCAGACTCAGGGTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000131806.8
ENSMUST00000156610.8
3UTR-3UTR CCA 90 bp GTTGCAGGCTGTCTTATTGTTCTGGGATGCACAGACGACCTGGGAACCCCTGTCTCAGGGTCTCCACCATaGCTACATTGTAAATGTGCT +
Preference number: 2 (lower is better)
Translates to: VAGCLIVLGCTDDLGTPVSGSPP*LHCKCA
Trigger: AGCACATTTACAATGTAGCCATGGTGGAGACCCTGA...GACAGGGGTTCCCAGGTCGTCTGTGCATCCCAGAACAATAAGACAGCCTGCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156610.8
3UTR-3UTR CCA 90 bp CTCAGACATTATGTAGTATTGGTGAGGACACGTGAGGGACCCTTGGGGTTTTCATTCATCCCTCTGAGCTaGGCTCTCCTTCAGGGTCTC +
Preference number: 2 (lower is better)
Translates to: LRHYVVLVRTREGPLGFSFIPLS*ALLQGL
Trigger: GAGACCCTGAAGGAGAGCCCAGCTCAGAGGGATGAA...TGAAAACCCCAAGGGTCCCTCACGTGTCCTCACCAATACTACATAATGTCTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000156610.8
3UTR-3UTR GCA 90 bp AGTTTCATTATTGTGTCTCTCATGAACGTTCTTTCCAAAACATGCCAGAGCATCCCCCAGCTCACCATGTaGTCCATGGGTGGGAGGGGC +
Preference number: 2 (lower is better)
Translates to: SFIIVSLMNVLSKTCQSIPQLTM*SMGGRG
Trigger: GCCCCTCCCACCCATGGAGCACATGGTGAGCTGGGG...GATGCTCTGGCATGTTTTGGAAAGAACGTTCATGAGAGACACAATAATGAAACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000131806.8
ENSMUST00000156610.8
3UTR-3UTR GCA 90 bp AGAAAGTTAGAATGTTCCCATTCTCAGACATTATGTAGTATTGGTGAGGACACGCCCCAGCTCACCATGTaGTCCATGGGTGGGAGGGGC +
Preference number: 2 (lower is better)
Translates to: RKLECSHSQTLCSIGEDTPQLTM*SMGGRG
Trigger: GCCCCTCCCACCCATGGAGCACATGGTGAGCTGGGG...CGTGTCCTCACCAATACTACATAATGTCTGAGAATGGGAACATTCTAACTTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000156066.8
ENSMUST00000156610.8
3UTR-3UTR CCA 90 bp GTCGACGTTGCAGGCTGTCTTATTGTTCTGGGATGCACAGACGACCTGGGAACCTTAAATACTCTGTTGTaGAGAGAGGAAGACGCCATC +
Preference number: 2 (lower is better)
Translates to: VDVAGCLIVLGCTDDLGTLNTLL*REEDAI
Trigger: GATGGCGTCTTCCTCTCTCCACAACAGAGTATTTAA...GGTTCCCAGGTCGTCTGTGCATCCCAGAACAATAAGACAGCCTGCAACGTCGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000129898.8
ENSMUST00000131806.8
ENSMUST00000156610.8
3UTR-3UTR CCA 90 bp TGCCCGCTTTGGATGTTCAAGTTCAGGCCATCAAGAACGAGAGGGGTGTTGTCTTTGAAGTACAGGAGGTaGCTGGAGTTTTCGTCGTTG +
Preference number: 2 (lower is better)
Translates to: CPLWMFKFRPSRTRGVLSLKYRR*LEFSSL
Trigger: CAACGACGAAAACTCCAGCCACCTCCTGTACTTCAA...AGACAACACCCCTCTCGTTCTTGATGGCCTGAACTTGAACATCCAAAGCGGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000129898.8
ENSMUST00000131806.8
ENSMUST00000156610.8
3UTR-3UTR CCA 90 bp AACTGTCTGCCCGCTTTGGATGTTCAAGTTCAGGCCATCAAGAACGAGAGGGGTTTGAAGTACAGGAGGTaGCTGGAGTTTTCGTCGTTG +
Preference number: 2 (lower is better)
Translates to: NCLPALDVQVQAIKNERGLKYRR*LEFSSL
Trigger: CAACGACGAAAACTCCAGCCACCTCCTGTACTTCAA...ACCCCTCTCGTTCTTGATGGCCTGAACTTGAACATCCAAAGCGGGCAGACAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000129898.8
ENSMUST00000131806.8
ENSMUST00000156610.8
3UTR-3UTR CCA 90 bp CAGCTTCCAACCTACCAGCTTTGTCTGCACTCTTCACCATCCAGAACCAACCCTTCCATCAACTCCTTGTaGGTGCCCTTTTCACAGATC +
Preference number: 2 (lower is better)
Translates to: QLPTYQLCLHSSPSRTNPSINSL*VPFSQI
Trigger: GATCTGTGAAAAGGGCACCCACAAGGAGTTGATGGA...AGGGTTGGTTCTGGATGGTGAAGAGTGCAGACAAAGCTGGTAGGTTGGAAGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156610.8
3UTR CAA 90 bp CATGCTTGCTATGTAAACCAACTGGTACATGTGGTGTTTGGTGTCTaGCAGGGTCTGGTCGACGTTGCAGGCTGTCTTATTGTTCTGGGA +
Preference number: 2 (lower is better)
Translates to: HACYVNQLVHVVFGV*QGLVDVAGCLIVLG
Trigger: TCCCAGAACAATAAGACAGCCTGCAACGTCGACCAGACCCTGCAAGACACCAAACACCACATGTACCAGTTGGTTTACATAGCAAGCATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000129898.8
ENSMUST00000131806.8
ENSMUST00000156610.8
3UTR CAA 90 bp CCTGTGGGAGTTGTGTCGAAGAAGCTCATTGGGCTCCTGACGATCTaGTTAAATACTCTGTTGTGGAGAGAGGAAGACGCCATCAGTGTA +
Preference number: 2 (lower is better)
Translates to: PVGVVSKKLIGLLTI*LNTLLWREEDAISV
Trigger: TACACTGATGGCGTCTTCCTCTCTCCACAACAGAGTATTTAACAAGATCGTCAGGAGCCCAATGAGCTTCTTCGACACAACTCCCACAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000129898.8
ENSMUST00000131806.8
ENSMUST00000156610.8
3UTR CAA 90 bp TTCATGAGAATGTCCATTCTGAGAGCAAACCACCTGAGCGCGCAGTaGAAGTACAGGAGGTGGCTGGAGTTTTCGTCGTTGAGTGTCTTA +
Preference number: 2 (lower is better)
Translates to: FMRMSILRANHLSAQ*KYRRWLEFSSLSVL
Trigger: TAAGACACTCAACGACGAAAACTCCAGCCACCTCCTGTACTTCAACTGCGCGCTCAGGTGGTTTGCTCTCAGAATGGACATTCTCATGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000129898.8
ENSMUST00000131806.8
ENSMUST00000156610.8
3UTR-3UTR TCA 90 bp AAGGTCACAGTTGAGAACGGTGTTCAGGCGATGAGCGATGGTCAACACTGTGCAGCCTTGATATACGTGTaGTATGTTTTCCAGGTCACG +
Preference number: 2 (lower is better)
Translates to: KVTVENGVQAMSDGQHCAALIYV*YVFQVT
Trigger: CGTGACCTGGAAAACATATCACACGTATATCAAGGC...TGCACAGTGTTGACCATCGCTCATCGCCTGAACACCGTTCTCAACTGTGACCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000129898.8
ENSMUST00000131806.8
ENSMUST00000156610.8
3UTR-3UTR TCA 90 bp CTGTCTGCCCGCTTTGGATGTTCAAGTTCAGGCCATCAAGAACGAGAGGGGTGTCATCTTCTAACAGAATaGCCTCATCACAAGACTCCA +
Preference number: 2 (lower is better)
Translates to: LSARFGCSSSGHQEREGCHLLTE*PHHKTP
Trigger: TGGAGTCTTGTGATGAGGTCATTCTGTTAGAAGATG...ACACCCCTCTCGTTCTTGATGGCCTGAACTTGAACATCCAAAGCGGGCAGACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156610.8
3UTR-3UTR CCA 90 bp CTCTCAAATCACCCACAGGACCTTTACAGTCCAACCTCTGCAGCTAGTAACATCGTCTGCCAAGAGAGATaGCCAGAAGAACAAGGGACA +
Preference number: 2 (lower is better)
Translates to: LSNHPQDLYSPTSAASNIVCQER*PEEQGT
Trigger: TGTCCCTTGTTCTTCTGGCCATCTCTCTTGGCAGAC...GATGTTACTAGCTGCAGAGGTTGGACTGTAAAGGTCCTGTGGGTGATTTGAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000131806.8
ENSMUST00000156066.8
ENSMUST00000156610.8
3UTR-3UTR CCA 90 bp CAGCTTCCAACCTACCAGCTTTGTCTGCACTCTTCACCATCCAGAACCAACCCTTGTCATCTCCAGCCTTaGGCATTTTCCCATCTCATT +
Preference number: 2 (lower is better)
Translates to: QLPTYQLCLHSSPSRTNPCHLQP*AFSHLI
Trigger: AATGAGATGGGAAAATGCCCAAGGCTGGAGATGACA...AGGGTTGGTTCTGGATGGTGAAGAGTGCAGACAAAGCTGGTAGGTTGGAAGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000156066.8
ENSMUST00000156610.8
3UTR-3UTR CCA 90 bp CAAATCACCCACAGGACCTTTACAGTCCAACCTCTGCAGCTAGTAACATCGCAAGTCACGATTCCTTCTTaGGGGGATTCAGTCTGGATG +
Preference number: 2 (lower is better)
Translates to: QITHRTFTVQPLQLVTSQVTIPS*GDSVWM
Trigger: CATCCAGACTGAATCCCCCCAAGAAGGAATCGTGAC...TTGCGATGTTACTAGCTGCAGAGGTTGGACTGTAAAGGTCCTGTGGGTGATTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000129898.8
ENSMUST00000131806.8
ENSMUST00000156610.8
3UTR-3UTR CCA 90 bp GTTGTGGAGAGAGGAAGACGCCATCAGTGTAGTGTTGGTGAAGGTAAAGCCTTTGTCACGATTCCTTCTTaGGGGGATTCAGTCTGGATG +
Preference number: 2 (lower is better)
Translates to: VVERGRRHQCSVGEGKAFVTIPS*GDSVWM
Trigger: CATCCAGACTGAATCCCCCCAAGAAGGAATCGTGAC...AAAGGCTTTACCTTCACCAACACTACACTGATGGCGTCTTCCTCTCTCCACAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000129898.8
ENSMUST00000131806.8
ENSMUST00000156610.8
3UTR-3UTR CCA 90 bp AATCACCCACAGGACCTTTACAGTCCAACCTCTGCAGCTAGTAACATCGCAAATGATGGTACCAGAGGCTaGTTCCACCAGACGAAACAG +
Preference number: 2 (lower is better)
Translates to: NHPQDLYSPTSAASNIANDGTRG*FHQTKQ
Trigger: CTGTTTCGTCTGGTGGAACCAGCCTCTGGTACCATC...ATTTGCGATGTTACTAGCTGCAGAGGTTGGACTGTAAAGGTCCTGTGGGTGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000129898.8
ENSMUST00000131806.8
ENSMUST00000156610.8
3UTR CAA 90 bp ATTCTCAGACATTATGTAGTATTGGTGAGGACACGTGAGGGACCCTaGGGGTTTTCAGAAGTGAGAGGCAGCTTCCAACCTACCAGCTTT +
Preference number: 2 (lower is better)
Translates to: ILRHYVVLVRTREGP*GFSEVRGSFQPTSF
Trigger: AAAGCTGGTAGGTTGGAAGCTGCCTCTCACTTCTGAAAACCCCAAGGGTCCCTCACGTGTCCTCACCAATACTACATAATGTCTGAGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000156066.8
ENSMUST00000156610.8
3UTR-3UTR GCA 90 bp CAAGAGAGATGGCCAGAAGAACAAGGGACACATCTCAGCCCCAGCTCACCATGTTTGTCTTTCCAAATGTaGATATCTCACAGGCAGCTT +
Preference number: 2 (lower is better)
Translates to: QERWPEEQGTHLSPSSPCLSFQM*ISHRQL
Trigger: AAGCTGCCTGTGAGATATGCACATTTGGAAAGACAA...ACATGGTGAGCTGGGGCTGAGATGTGTCCCTTGTTCTTCTGGCCATCTCTCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000131806.8
3UTR-3UTR CCA 90 bp GATCTTGTTAAATACTCTGTTGTGGAGAGAGGAAGACGCCATCAGTGTAGTGTTGATGCACAGACGACCTaGGAACCCCTGTCTAACCAG +
Preference number: 2 (lower is better)
Translates to: DLVKYSVVERGRRHQCSVDAQTT*EPLSNQ
Trigger: CTGGTTAGACAGGGGTTCCCAGGTCGTCTGTGCATC...AACACTACACTGATGGCGTCTTCCTCTCTCCACAACAGAGTATTTAACAAGATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000129898.8
ENSMUST00000131806.8
ENSMUST00000156610.8
3UTR-3UTR CCA 90 bp AAGGTCACAGTTGAGAACGGTGTTCAGGCGATGAGCGATGGTCAACACTGTGCATTAAATACTCTGTTGTaGAGAGAGGAAGACGCCATC +
Preference number: 2 (lower is better)
Translates to: KVTVENGVQAMSDGQHCALNTLL*REEDAI
Trigger: GATGGCGTCTTCCTCTCTCCACAACAGAGTATTTAA...TGCACAGTGTTGACCATCGCTCATCGCCTGAACACCGTTCTCAACTGTGACCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000129898.8
ENSMUST00000131806.8
ENSMUST00000156610.8
3UTR-3UTR CCA 90 bp AATCACCCACAGGACCTTTACAGTCCAACCTCTGCAGCTAGTAACATCGCAAATGCCATACAAAGCAGCTaGCGTTCTCCTACTGAGAAG +
Preference number: 2 (lower is better)
Translates to: NHPQDLYSPTSAASNIANAIQSS*RSPTEK
Trigger: CTTCTCAGTAGGAGAACGCCAGCTGCTTTGTATGGC...ATTTGCGATGTTACTAGCTGCAGAGGTTGGACTGTAAAGGTCCTGTGGGTGATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000129898.8
ENSMUST00000131806.8
ENSMUST00000156066.8
ENSMUST00000156610.8
3UTR-3UTR CCA 90 bp TCTGTATCTCATCCGATAGTCCTTGAACGTTATCTCCCCTCGGCTCGGCCAGTCATTGTAAATGTGCTCTaGATCCTTGAATTGCAGTCC +
Preference number: 2 (lower is better)
Translates to: SVSHPIVLERYLPSARPVIVNVL*ILELQS
Trigger: GGACTGCAATTCAAGGATCCAGAGCACATTTACAAT...GACTGGCCGAGCCGAGGGGAGATAACGTTCAAGGACTATCGGATGAGATACAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156610.8
3UTR CAA 90 bp TCGAAGAAGCTCATTGGGCTCCTGACGATCTTGTTAAATACTCTGTaGTGGAGAGAGGAAGACGCCATCAGTGTAGTGTTGGTGAAGGTA +
Preference number: 2 (lower is better)
Translates to: SKKLIGLLTILLNTL*WREEDAISVVLVKV
Trigger: TACCTTCACCAACACTACACTGATGGCGTCTTCCTCTCTCCACAACAGAGTATTTAACAAGATCGTCAGGAGCCCAATGAGCTTCTTCGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000129898.8
ENSMUST00000131806.8
ENSMUST00000156610.8
3UTR-3UTR TCA 90 bp CGGGCTTCTCAGCGAGGACTTCAGGCTTGTCAAACTCAATCACCTTCCCATTTTACCCTCCAGAAGCCTTaGTATACGTGTGATATGTTT +
Preference number: 2 (lower is better)
Translates to: RASQRGLQACQTQSPSHFTLQKP*YTCDMF
Trigger: AAACATATCACACGTATATCAAGGCTTCTGGAGGGT...AAAATGGGAAGGTGATTGAGTTTGACAAGCCTGAAGTCCTCGCTGAGAAGCCCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000129898.8
ENSMUST00000131806.8
ENSMUST00000156610.8
3UTR-3UTR TCA 90 bp CTCTGGGAGTTTCATTATTGTGTCTCTCATGAACGTTCTTTCCAAAACATGCCAGTGAGAGAACCAAGGTaGCCGGCTGATGTTCTCCAC +
Preference number: 2 (lower is better)
Translates to: LWEFHYCVSHERSFQNMPVREPR*PADVLH
Trigger: GTGGAGAACATCAGCCGGTCACCTTGGTTCTCTCAC...TGGCATGTTTTGGAAAGAACGTTCATGAGAGACACAATAATGAAACTCCCAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000129898.8
ENSMUST00000131806.8
ENSMUST00000156610.8
3UTR-3UTR TCA 90 bp ACAAAAGATGAAGTTCTTGGAGTTTGCTGCAAGGAAATCAGCCAGCTGAAGAATGACAGGTCCCCACTTTaGAGGGGTGAGTGTGTTCAG +
Preference number: 2 (lower is better)
Translates to: TKDEVLGVCCKEISQLKNDRSPL*RGECVQ
Trigger: CTGAACACACTCACCCCTTCAAAGTGGGGACCTGTC...ATTCTTCAGCTGGCTGATTTCCTTGCAGCAAACTCCAAGAACTTCATCTTTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000129898.8
3UTR-3UTR TCA 90 bp CTCTGGGAGTTTCATTATTGTGTCTCTCATGAACGTTCTTTCCAAAACATGCCAGACAGGTCCCCACTTTaGAGGGGTGAGTGTGTTCAG +
Preference number: 2 (lower is better)
Translates to: LWEFHYCVSHERSFQNMPDRSPL*RGECVQ
Trigger: CTGAACACACTCACCCCTTCAAAGTGGGGACCTGTC...TGGCATGTTTTGGAAAGAACGTTCATGAGAGACACAATAATGAAACTCCCAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000129898.8
ENSMUST00000131806.8
ENSMUST00000156610.8
3UTR-3UTR CCA 90 bp GAAGAAAAACTAAGGGTCACCAGCAAGGCCACAACAAAGGTGACAATGTTCATGGGTACATGTGGTGTTTaGTGTCTTGCAGGGTCTGGT +
Preference number: 2 (lower is better)
Translates to: EEKLRVTSKATTKVTMFMGTCGV*CLAGSG
Trigger: ACCAGACCCTGCAAGACACCAAACACCACATGTACC...CATGAACATTGTCACCTTTGTTGTGGCCTTGCTGGTGACCCTTAGTTTTTCTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000129898.8
ENSMUST00000131806.8
ENSMUST00000156610.8
3UTR-3UTR GCA 90 bp CTGTATAGATTCATTACTGAGCCAAGGGAGATGGCTGTGGGAGGTCATGTGCTCTCAACACAGACACCATaGTTGCTATGTAAACCAACT +
Preference number: 2 (lower is better)
Translates to: LYRFITEPREMAVGGHVLSTQTP*LLCKPT
Trigger: AGTTGGTTTACATAGCAAGCATGGTGTCTGTGTTGA...GAGCACATGACCTCCCACAGCCATCTCCCTTGGCTCAGTAATGAATCTATACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129898.8
3UTR-3UTR CCA 90 bp AAAATGACGCTGTTGGGCTCTGGAAATACAGTGGCAATGTCTGCTCTAGAAAGAACCAACTGGTACATGTaGTGTTTGGTGTCTTGCAGG +
Preference number: 2 (lower is better)
Translates to: KMTLLGSGNTVAMSALERTNWYM*CLVSCR
Trigger: CCTGCAAGACACCAAACACCACATGTACCAGTTGGT...TCTTTCTAGAGCAGACATTGCCACTGTATTTCCAGAGCCCAACAGCGTCATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000129898.8
3UTR-3UTR CCA 90 bp CAGGACAAGGTCACAGTTGAGAACGGTGTTCAGGCGATGAGCGATGGTCAACACTGTATAATAAGTAAATaGAAAGGTCTGTGTCCACTC +
Preference number: 2 (lower is better)
Translates to: QDKVTVENGVQAMSDGQHCIISK*KGLCPL
Trigger: GAGTGGACACAGACCTTTCCATTTACTTATTATACA...GTGTTGACCATCGCTCATCGCCTGAACACCGTTCTCAACTGTGACCTTGTCCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129898.8
3UTR-3UTR CCA 90 bp TCTGGAAATACAGTGGCAATGTCTGCTCTAGAAAGACCCAGAAATACAAAGAGGTATCAGTACCCACACTaGGGCTACTGGGTAGGTCTT +
Preference number: 2 (lower is better)
Translates to: SGNTVAMSALERPRNTKRYQYPH*GYWVGL
Trigger: AAGACCTACCCAGTAGCCCCAGTGTGGGTACTGATA...CCTCTTTGTATTTCTGGGTCTTTCTAGAGCAGACATTGCCACTGTATTTCCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129898.8
3UTR-3UTR TCA 90 bp CTCTGGGAGTTTCATTATTGTGTCTCTCATGAACGTTCTTTCCAAAACATGCCATGGGGTTTTCAGAAGTaGGAGGCAGCTTCCAACCTA +
Preference number: 2 (lower is better)
Translates to: LWEFHYCVSHERSFQNMPWGFQK*EAASNL
Trigger: TAGGTTGGAAGCTGCCTCTCACTTCTGAAAACCCCA...TGGCATGTTTTGGAAAGAACGTTCATGAGAGACACAATAATGAAACTCCCAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000131806.8
ENSMUST00000156610.8
3UTR-3UTR CCA 90 bp CAGCAAGGCCACAACAAAGGTGACAATGTTCATGAGAATGTCCATTCTGAGAGCTTAAATACTCTGTTGTaGAGAGAGGAAGACGCCATC +
Preference number: 2 (lower is better)
Translates to: QQGHNKGDNVHENVHSESLNTLL*REEDAI
Trigger: GATGGCGTCTTCCTCTCTCCACAACAGAGTATTTAA...GCTCTCAGAATGGACATTCTCATGAACATTGTCACCTTTGTTGTGGCCTTGCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000129898.8
ENSMUST00000131806.8
ENSMUST00000156610.8
3UTR CAA 90 bp TTAAATACTCTGTTGTGGAGAGAGGAAGACGCCATCAGTGTAGTGTaGGTGAAGGTAAAGCCTTTGATGATGCCAAACATCAACACAGAC +
Preference number: 2 (lower is better)
Translates to: LNTLLWREEDAISVV*VKVKPLMMPNINTD
Trigger: GTCTGTGTTGATGTTTGGCATCATCAAAGGCTTTACCTTCACCAACACTACACTGATGGCGTCTTCCTCTCTCCACAACAGAGTATTTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000129898.8
ENSMUST00000131806.8
ENSMUST00000156610.8
3UTR-3UTR GCA 90 bp ACAAAAGATGAAGTTCTTGGAGTTTGCTGCAAGGAAATCAGCCAGCTGAAGAATACAATCCCAACTGTCTaGCCGCTTTGGATGTTCAAG +
Preference number: 2 (lower is better)
Translates to: TKDEVLGVCCKEISQLKNTIPTV*PLWMFK
Trigger: CTTGAACATCCAAAGCGGGCAGACAGTTGGGATTGT...ATTCTTCAGCTGGCTGATTTCCTTGCAGCAAACTCCAAGAACTTCATCTTTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000129898.8
3UTR-3UTR GCA 90 bp AGTTTCATTATTGTGTCTCTCATGAACGTTCTTTCCAAAACATGCCAGAGCATCTCAACACAGACACCATaGTTGCTATGTAAACCAACT +
Preference number: 2 (lower is better)
Translates to: SFIIVSLMNVLSKTCQSISTQTP*LLCKPT
Trigger: AGTTGGTTTACATAGCAAGCATGGTGTCTGTGTTGA...GATGCTCTGGCATGTTTTGGAAAGAACGTTCATGAGAGACACAATAATGAAACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000129898.8
ENSMUST00000131806.8
ENSMUST00000156610.8
3UTR-3UTR CCA 90 bp AGGTACACAGCCAAGGGAAAAGATGGTAAATACCGTTTGTGTCCACAAATTCTTTGTATAATAAGTAAATaGAAAGGTCTGTGTCCACTC +
Preference number: 2 (lower is better)
Translates to: RYTAKGKDGKYRLCPQILCIISK*KGLCPL
Trigger: GAGTGGACACAGACCTTTCCATTTACTTATTATACA...AAGAATTTGTGGACACAAACGGTATTTACCATCTTTTCCCTTGGCTGTGTACCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000152438.2
3UTR-3UTR CAA 90 bp CCCACAGTGCAGATGTCCACCTCGTCAATGATGATGGTACCAGAGGCTGGTTCCGCCGGCCTGTGGGAGTaGTGTCGAAGAAGCTCATTG +
Preference number: 3 (lower is better)
Translates to: PTVQMSTSSMMMVPEAGSAGLWE*CRRSSL
Trigger: CAATGAGCTTCTTCGACACAACTCCCACAGGCCGGC...GGAACCAGCCTCTGGTACCATCATCATTGACGAGGTGGACATCTGCACTGTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000129898.8
ENSMUST00000131806.8
ENSMUST00000156610.8
3UTR-3UTR CAA 90 bp GATGATTTTCCGGAGCCCGTCCTTCCCACAATCCCAACTGTCTGCCCGCTTTGGTCTGCGGAGGTGAACTaGGCTTGGGTCTCTGTTCCT +
Preference number: 3 (lower is better)
Translates to: DDFPEPVLPTIPTVCPLWSAEVN*AWVSVP
Trigger: AGGAACAGAGACCCAAGCCAAGTTCACCTCCGCAGA...CCAAAGCGGGCAGACAGTTGGGATTGTGGGAAGGACGGGCTCCGGAAAATCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000129898.8
ENSMUST00000131806.8
ENSMUST00000156610.8
3UTR TCA 72 bp TGGATGACGCCCAGACCCTGTATGGAGGAGGTGATGTaGGAGAACCAAGGTGACCGGCTGATGTTCTCCACC +
Preference number: 3 (lower is better)
Translates to: WMTPRPCMEEVM*ENQGDRLMFST
Trigger: GGTGGAGAACATCAGCCGGTCACCTTGGTTCTCTCACATCACCTCCTCCATACAGGGTCTGGGCGTCATCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000129898.8
ENSMUST00000131806.8
ENSMUST00000156610.8
3UTR TCA 72 bp TCATCTCCTGAAGCCAAGACAGCGTCTTCATCCCTCTaGGCTGGGCTCTCCTTCAGGGTCTCCACCATGGCT +
Preference number: 3 (lower is better)
Translates to: SSPEAKTASSSL*AGLSFRVSTMA
Trigger: AGCCATGGTGGAGACCCTGAAGGAGAGCCCAGCTCAGAGGGATGAAGACGCTGTCTTGGCTTCAGGAGATGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156610.8
3UTR TCA 72 bp ACCCTGTATGGAGGAGGTGATGTGAGAGAACCAAGGTaGCCGGCTGATGTTCTCCACCTGCTTGAGCTCCTG +
Preference number: 3 (lower is better)
Translates to: TLYGGGDVREPR*PADVLHLLELL
Trigger: CAGGAGCTCAAGCAGGTGGAGAACATCAGCCGGTCACCTTGGTTCTCTCACATCACCTCCTCCATACAGGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000129898.8
ENSMUST00000131806.8
ENSMUST00000156610.8
3UTR TCA 72 bp CTCGGCTCGGCCAGTCTTTGGGACAGGTCCCCACTTTaGAGGGGTGAGTGTGTTCAGGAACACAGGTCAAAA +
Preference number: 3 (lower is better)
Translates to: LGSASLWDRSPL*RGECVQEHRSK
Trigger: TTTTGACCTGTGTTCCTGAACACACTCACCCCTTCAAAGTGGGGACCTGTCCCAAAGACTGGCCGAGCCGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000129898.8
ENSMUST00000131806.8
ENSMUST00000156610.8
3UTR CCA 72 bp AGGGTCTGGTCGACGTTGCAGGCTGTCTTATTGTTCTaGGATGCACAGACGACCTGGGAACCCCTGTCTAAC +
Preference number: 3 (lower is better)
Translates to: RVWSTLQAVLLF*DAQTTWEPLSN
Trigger: GTTAGACAGGGGTTCCCAGGTCGTCTGTGCATCCCAGAACAATAAGACAGCCTGCAACGTCGACCAGACCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000129898.8
ENSMUST00000131806.8
ENSMUST00000156610.8
3UTR CCA 72 bp CCCGTCCTTCCCACAATCCCAACTGTCTGCCCGCTTTaGATGTTCAAGTTCAGGCCATCAAGAACGAGAGGG +
Preference number: 3 (lower is better)
Translates to: PVLPTIPTVCPL*MFKFRPSRTRG
Trigger: CCCTCTCGTTCTTGATGGCCTGAACTTGAACATCCAAAGCGGGCAGACAGTTGGGATTGTGGGAAGGACGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000129898.8
ENSMUST00000131806.8
ENSMUST00000156610.8
3UTR CCA 72 bp CTGTACCTACAAACAGGACAGGATCCTGGGGGATCATaGTCAGCTTGGTTCGGAGGTCTTCCAGACCCACAG +
Preference number: 3 (lower is better)
Translates to: LYLQTGQDPGGS*SAWFGGLPDPQ
Trigger: CTGTGGGTCTGGAAGACCTCCGAACCAAGCTGACCATGATCCCCCAGGATCCTGTCCTGTTTGTAGGTACAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000131806.8
ENSMUST00000156610.8
3UTR-3UTR CAA 90 bp TCCGGAGCCCGTCCTTCCCACAATCCCAACTGTCTGCCCGCTTTGGATGTTCAATGTTCGCACACACACTaGAAGCAATCCACTGAGCTG +
Preference number: 3 (lower is better)
Translates to: SGARPSHNPNCLPALDVQCSHTH*KQSTEL
Trigger: CAGCTCAGTGGATTGCTTCAAGTGTGTGTGCGAACA...TTGAACATCCAAAGCGGGCAGACAGTTGGGATTGTGGGAAGGACGGGCTCCGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000129898.8
ENSMUST00000131806.8
ENSMUST00000156610.8
3UTR-3UTR CAA 90 bp TTCCAGACCCACAGTGCAGATGTCCACCTCGTCAATGATGATGGTACCAGAGGCGGAGGTGAACTTGGCTaGGGTCTCTGTTCCTGTTCG +
Preference number: 3 (lower is better)
Translates to: FQTHSADVHLVNDDGTRGGGELG*GLCSCS
Trigger: CGAACAGGAACAGAGACCCAAGCCAAGTTCACCTCC...GCCTCTGGTACCATCATCATTGACGAGGTGGACATCTGCACTGTGGGTCTGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000129898.8
ENSMUST00000131806.8
ENSMUST00000156610.8
3UTR GCA 72 bp GCTGTTTTACCACTCCTCCTCTATGCAGACAGGGGATaGCTAGCATGTACTCCCAGGTACACAGCCAAGGGA +
Preference number: 3 (lower is better)
Translates to: AVLPLLLYADRG*LACTPRYTAKG
Trigger: TCCCTTGGCTGTGTACCTGGGAGTACATGCTAGGCATCCCCTGTCTGCATAGAGGAGGAGTGGTAAAACAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000152438.2
3UTR CCA 72 bp TTGTACCTACAAACAGGACAGGATCCTGGGGGATCATaGTCAGCTTGGTTCGGAGGTCTTCCAGACCCACAG +
Preference number: 3 (lower is better)
Translates to: LYLQTGQDPGGS*SAWFGGLPDPQ
Trigger: CTGTGGGTCTGGAAGACCTCCGAACCAAGCTGACCATGATCCCCCAGGATCCTGTCCTGTTTGTAGGTACAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000129898.8
3UTR CCA 72 bp TGTATAGATTCATTACTGAGCCAAGGGAGATGGCTGTaGGAGGTCATGTGCTCCATGGGTGGGAGGGGCTGT +
Preference number: 3 (lower is better)
Translates to: CIDSLLSQGRWL*EVMCSMGGRGC
Trigger: ACAGCCCCTCCCACCCATGGAGCACATGACCTCCCACAGCCATCTCCCTTGGCTCAGTAATGAATCTATACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000129898.8
3UTR-3UTR CAA 90 bp TTGGTGAGGACACGTGAGGGACCCTTGGGGTTTTCAGAAGTGAGAGGCAGCTTCTCCAACCTACCAGCTTaGTCTGCACTCTTCACCATC +
Preference number: 3 (lower is better)
Translates to: LVRTREGPLGFSEVRGSFSNLPA*SALFTI
Trigger: GATGGTGAAGAGTGCAGACAAAGCTGGTAGGTTGGA...GAAGCTGCCTCTCACTTCTGAAAACCCCAAGGGTCCCTCACGTGTCCTCACCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000156066.8
ENSMUST00000156610.8
3UTR-3UTR CAA 90 bp GTATTGGTGAGGACACGTGAGGGACCCTTGGGGTTTTCAGAAGTGAGAGGCAGCTCCAACCTACCAGCTTaGTCTGCACTCTTCACCATC +
Preference number: 3 (lower is better)
Translates to: VLVRTREGPLGFSEVRGSSNLPA*SALFTI
Trigger: GATGGTGAAGAGTGCAGACAAAGCTGGTAGGTTGGA...GCTGCCTCTCACTTCTGAAAACCCCAAGGGTCCCTCACGTGTCCTCACCAATAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000156066.8
ENSMUST00000156610.8
3UTR-3UTR CAA 90 bp ATGGCCAGAAGAACAAGGGACACATCTCAGCCCCAGCTCACCATGTGCTCCATGCTGTCATCTCCAGCCTaGGGCATTTTCCCATCTCAT +
Preference number: 3 (lower is better)
Translates to: MARRTRDTSQPQLTMCSMLSSPA*GIFPSH
Trigger: ATGAGATGGGAAAATGCCCAAGGCTGGAGATGACAG...CATGGAGCACATGGTGAGCTGGGGCTGAGATGTGTCCCTTGTTCTTCTGGCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000156066.8
ENSMUST00000156610.8
3UTR-3UTR CAA 90 bp GTCGACGTTGCAGGCTGTCTTATTGTTCTGGGATGCACAGACGACCTGGGAACCTTGCAGGCTGTCTTATaGTTCTGGGATGCACAGACG +
Preference number: 3 (lower is better)
Translates to: VDVAGCLIVLGCTDDLGTLQAVL*FWDAQT
Trigger: CGTCTGTGCATCCCAGAACAATAAGACAGCCTGCAA...GGTTCCCAGGTCGTCTGTGCATCCCAGAACAATAAGACAGCCTGCAACGTCGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000129898.8
ENSMUST00000131806.8
ENSMUST00000156610.8
3UTR-3UTR CAA 90 bp TTCCAGACCCACAGTGCAGATGTCCACCTCGTCAATGATGATGGTACCAGAGGCAGGGTCTGGTCGACGTaGCAGGCTGTCTTATTGTTC +
Preference number: 3 (lower is better)
Translates to: FQTHSADVHLVNDDGTRGRVWST*QAVLLF
Trigger: GAACAATAAGACAGCCTGCAACGTCGACCAGACCCT...GCCTCTGGTACCATCATCATTGACGAGGTGGACATCTGCACTGTGGGTCTGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000129898.8
ENSMUST00000131806.8
ENSMUST00000156610.8
3UTR-3UTR CAA 90 bp CTGTTGTGGAGAGAGGAAGACGCCATCAGTGTAGTGTTGGTGAAGGTAAAGCCTGCCGGCCTGTGGGAGTaGTGTCGAAGAAGCTCATTG +
Preference number: 3 (lower is better)
Translates to: LLWREEDAISVVLVKVKPAGLWE*CRRSSL
Trigger: CAATGAGCTTCTTCGACACAACTCCCACAGGCCGGC...AGGCTTTACCTTCACCAACACTACACTGATGGCGTCTTCCTCTCTCCACAACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000129898.8
ENSMUST00000131806.8
ENSMUST00000156610.8
3UTR-3UTR CAA 90 bp CAACCTACCAGCTTTGTCTGCACTCTTCACCATCCAGAACCAACCCTGAGTCTGTCTGCGGAGGTGAACTaGGCTTGGGTCTCTGTTCCT +
Preference number: 3 (lower is better)
Translates to: QPTSFVCTLHHPEPTLSLSAEVN*AWVSVP
Trigger: AGGAACAGAGACCCAAGCCAAGTTCACCTCCGCAGA...CAGACTCAGGGTTGGTTCTGGATGGTGAAGAGTGCAGACAAAGCTGGTAGGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000131806.8
ENSMUST00000156610.8
3UTR-3UTR CAA 90 bp AATCACCCACAGGACCTTTACAGTCCAACCTCTGCAGCTAGTAACATCGCAAATCGGCTCGGCCAGTCTTaGGGACAGGTCCCCACTTTG +
Preference number: 3 (lower is better)
Translates to: NHPQDLYSPTSAASNIANRLGQS*GQVPTL
Trigger: CAAAGTGGGGACCTGTCCCAAAGACTGGCCGAGCCG...ATTTGCGATGTTACTAGCTGCAGAGGTTGGACTGTAAAGGTCCTGTGGGTGATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000129898.8
ENSMUST00000131806.8
ENSMUST00000156610.8
3UTR-3UTR CAA 90 bp AGATTCATTACTGAGCCAAGGGAGATGGCTGTGGGAGGTCATGTGCTCCATGGGAACTGTCTGCCCGCTTaGGATGTTCAAGTTCAGGCC +
Preference number: 3 (lower is better)
Translates to: RFITEPREMAVGGHVLHGNCLPA*DVQVQA
Trigger: GGCCTGAACTTGAACATCCAAAGCGGGCAGACAGTT...CCCATGGAGCACATGACCTCCCACAGCCATCTCCCTTGGCTCAGTAATGAATCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129898.8
3UTR TCA 72 bp GCTTTGTCTGCACTCTTCACCATCCAGAACCAACCCTaGGTCTGCCAAGAGAGATGGCCAGAAGAACAAGGG +
Preference number: 3 (lower is better)
Translates to: ALSALFTIQNQP*VCQERWPEEQG
Trigger: CCCTTGTTCTTCTGGCCATCTCTCTTGGCAGACTCAGGGTTGGTTCTGGATGGTGAAGAGTGCAGACAAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000156066.8
ENSMUST00000156610.8
3UTR TCA 72 bp GGTGACCGGCTGATGTTCTCCACCTGCTTGAGCTCCTaGACTCCTCGATGGAAGATGCGTAAAAGAATGAGG +
Preference number: 3 (lower is better)
Translates to: GDRLMFSTCLSS*TPRWKMRKRMR
Trigger: CCTCATTCTTTTACGCATCTTCCATCGAGGAGTTCAGGAGCTCAAGCAGGTGGAGAACATCAGCCGGTCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000129898.8
ENSMUST00000131806.8
ENSMUST00000156610.8
3UTR TCA 72 bp AGGACAAGGTCACAGTTGAGAACGGTGTTCAGGCGATaGGCGATGGTCAACACTGTGCAGCTTTTGAAGGCC +
Preference number: 3 (lower is better)
Translates to: RTRSQLRTVFRR*AMVNTVQLLKA
Trigger: GGCCTTCAAAAGCTGCACAGTGTTGACCATCGCTCATCGCCTGAACACCGTTCTCAACTGTGACCTTGTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000129898.8
ENSMUST00000131806.8
ENSMUST00000156066.8
ENSMUST00000156610.8
3UTR TCA 72 bp CTGATACTTCAAAGGTCAGTCCCTCCCTGGCTCCGTTaGATTCTTTCAAGTGGGCTGAATCCCTGGGCGTTG +
Preference number: 3 (lower is better)
Translates to: LILQRSVPPWLR*ILSSGLNPWAL
Trigger: CAACGCCCAGGGATTCAGCCCACTTGAAAGAATTCAACGGAGCCAGGGAGGGACTGACCTTTGAAGTATCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129898.8
3UTR GCA 72 bp GAAGTGAGAGGCAGCTTCCAACCTACCAGCTTTGTCTaGACTCTTCACCATCCAGAACCAACCCTGAGTCTG +
Preference number: 3 (lower is better)
Translates to: EVRGSFQPTSFV*TLHHPEPTLSL
Trigger: CAGACTCAGGGTTGGTTCTGGATGGTGAAGAGTGCAGACAAAGCTGGTAGGTTGGAAGCTGCCTCTCACTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000156066.8
ENSMUST00000156610.8
3UTR GCA 72 bp CTTGAATTGCAGTCCCCGGAGGTTGTGGATAAGCTTTaGATAGCGCCCCCTCTCTTCCATCAACTCCTTGTG +
Preference number: 3 (lower is better)
Translates to: LELQSPEVVDKL*IAPPLFHQLLV
Trigger: CACAAGGAGTTGATGGAAGAGAGGGGGCGCTATGCAAAGCTTATCCACAACCTCCGGGGACTGCAATTCAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000156610.8
3UTR-3UTR CAA 90 bp CACTCTTCACCATCCAGAACCAACCCTGAGTCTGCCAAGAGAGATGGCCAGAAGTCCAACCTACCAGCTTaGTCTGCACTCTTCACCATC +
Preference number: 3 (lower is better)
Translates to: HSSPSRTNPESAKRDGQKSNLPA*SALFTI
Trigger: GATGGTGAAGAGTGCAGACAAAGCTGGTAGGTTGGA...CTTCTGGCCATCTCTCTTGGCAGACTCAGGGTTGGTTCTGGATGGTGAAGAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000156066.8
ENSMUST00000156610.8
3UTR-3UTR CAA 90 bp GATCATGGTCAGCTTGGTTCGGAGGTCTTCCAGACCCACAGTGCAGATGTCCACGCCATCAGTGTAGTGTaGGTGAAGGTAAAGCCTTTG +
Preference number: 3 (lower is better)
Translates to: DHGQLGSEVFQTHSADVHAISVV*VKVKPL
Trigger: CAAAGGCTTTACCTTCACCAACACTACACTGATGGC...GTGGACATCTGCACTGTGGGTCTGGAAGACCTCCGAACCAAGCTGACCATGATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000129898.8
ENSMUST00000131806.8
ENSMUST00000156610.8
3UTR-3UTR CAA 90 bp ATGGCCAGAAGAACAAGGGACACATCTCAGCCCCAGCTCACCATGTGCTCCATGGGGCTCCTGACGATCTaGTTAAATACTCTGTTGTGG +
Preference number: 3 (lower is better)
Translates to: MARRTRDTSQPQLTMCSMGLLTI*LNTLLW
Trigger: CCACAACAGAGTATTTAACAAGATCGTCAGGAGCCC...CATGGAGCACATGGTGAGCTGGGGCTGAGATGTGTCCCTTGTTCTTCTGGCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000131806.8
ENSMUST00000156610.8
3UTR-3UTR CAA 90 bp GATTCATTACTGAGCCAAGGGAGATGGCTGTGGGAGGTCATGTGCTCCATGGGTACAAGGGTGTCTGTCTaGGAATCCATGGAGGCAGTA +
Preference number: 3 (lower is better)
Translates to: DSLLSQGRWLWEVMCSMGTRVSV*ESMEAV
Trigger: TACTGCCTCCATGGATTCCAAGACAGACACCCTTGT...ACCCATGGAGCACATGACCTCCCACAGCCATCTCCCTTGGCTCAGTAATGAATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129898.8
3UTR-3UTR CAA 90 bp CAACTGTCTGCCCGCTTTGGATGTTCAAGTTCAGGCCATCAAGAACGAGAGGGGTCTTCCATCAACTCCTaGTGGGTGCCCTTTTCACAG +
Preference number: 3 (lower is better)
Translates to: QLSARFGCSSSGHQEREGSSINS*WVPFSQ
Trigger: CTGTGAAAAGGGCACCCACAAGGAGTTGATGGAAGA...CCCCTCTCGTTCTTGATGGCCTGAACTTGAACATCCAAAGCGGGCAGACAGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000156610.8
3UTR-3UTR CAA 90 bp AATCCCAACTGTCTGCCCGCTTTGGATGTTCAAGTTCAGGCCATCAAGAACGAGATGTGCTCTGGATCCTaGAATTGCAGTCCCCGGAGG +
Preference number: 3 (lower is better)
Translates to: NPNCLPALDVQVQAIKNEMCSGS*NCSPRR
Trigger: CCTCCGGGGACTGCAATTCAAGGATCCAGAGCACAT...CTCGTTCTTGATGGCCTGAACTTGAACATCCAAAGCGGGCAGACAGTTGGGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156610.8
3UTR-3UTR CAA 90 bp AAGGTCACAGTTGAGAACGGTGTTCAGGCGATGAGCGATGGTCAACACTGTGCATCCAACCTACCAGCTTaGTCTGCACTCTTCACCATC +
Preference number: 3 (lower is better)
Translates to: KVTVENGVQAMSDGQHCASNLPA*SALFTI
Trigger: GATGGTGAAGAGTGCAGACAAAGCTGGTAGGTTGGA...TGCACAGTGTTGACCATCGCTCATCGCCTGAACACCGTTCTCAACTGTGACCTT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000131806.8
ENSMUST00000156066.8
ENSMUST00000156610.8
3UTR-3UTR CAA 90 bp GTTGTACCTACAAACAGGACAGGATCCTGGGGGATCATGGTCAGCTTGGTTCGGGGGCTCCTGACGATCTaGTTAAATACTCTGTTGTGG +
Preference number: 3 (lower is better)
Translates to: VVPTNRTGSWGIMVSLVRGLLTI*LNTLLW
Trigger: CCACAACAGAGTATTTAACAAGATCGTCAGGAGCCC...CCGAACCAAGCTGACCATGATCCCCCAGGATCCTGTCCTGTTTGTAGGTACAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000129898.8
3UTR-3UTR CAA 90 bp TCCTGTTCGCACACACACTTGAAGCAATCCACTGAGCTGGATGATGTAAGACAAGCCGGCCTGTGGGAGTaGTGTCGAAGAAGCTCATTG +
Preference number: 3 (lower is better)
Translates to: SCSHTHLKQSTELDDVRQAGLWE*CRRSSL
Trigger: CAATGAGCTTCTTCGACACAACTCCCACAGGCCGGC...TTGTCTTACATCATCCAGCTCAGTGGATTGCTTCAAGTGTGTGTGCGAACAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000129898.8
ENSMUST00000131806.8
ENSMUST00000156610.8
3UTR-3UTR CAA 90 bp AGAGCAAACCACCTGAGCGCGCAGTTGAAGTACAGGAGGTGGCTGGAGTTTTCGCTGGAGTTTTCGTCGTaGAGTGTCTTAAACTTGCTG +
Preference number: 3 (lower is better)
Translates to: RANHLSAQLKYRRWLEFSLEFSS*SVLNLL
Trigger: CAGCAAGTTTAAGACACTCAACGACGAAAACTCCAG...CGAAAACTCCAGCCACCTCCTGTACTTCAACTGCGCGCTCAGGTGGTTTGCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000129898.8
ENSMUST00000131806.8
ENSMUST00000156610.8
3UTR-3UTR CAA 90 bp CAACTGTCTGCCCGCTTTGGATGTTCAAGTTCAGGCCATCAAGAACGAGAGGGGGACAATGACAAGCCTTaGGATGAGGCGCTGATTGAA +
Preference number: 3 (lower is better)
Translates to: QLSARFGCSSSGHQEREGDNDKP*DEALIE
Trigger: TTCAATCAGCGCCTCATCCAAAGGCTTGTCATTGTC...CCCCTCTCGTTCTTGATGGCCTGAACTTGAACATCCAAAGCGGGCAGACAGTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000129898.8
ENSMUST00000131806.8
ENSMUST00000156610.8
3UTR-3UTR CAA 90 bp TCTGCTCTAGAAAGACCCAGAAATACAAAGAGGGCCTTCAATCCGAGGAGTAGCTCTGCGGAGGTGAACTaGGCTTGGGTCTCTGTTCCT +
Preference number: 3 (lower is better)
Translates to: SALERPRNTKRAFNPRSSSAEVN*AWVSVP
Trigger: AGGAACAGAGACCCAAGCCAAGTTCACCTCCGCAGA...GCTACTCCTCGGATTGAAGGCCCTCTTTGTATTTCTGGGTCTTTCTAGAGCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129898.8
3UTR-3UTR CAA 90 bp AAGGTCACAGTTGAGAACGGTGTTCAGGCGATGAGCGATGGTCAACACTGTGCAGCGAGGACTTCAGGCTaGTCAAACTCAATCACCTTC +
Preference number: 3 (lower is better)
Translates to: KVTVENGVQAMSDGQHCAARTSG*SNSITF
Trigger: GAAGGTGATTGAGTTTGACAAGCCTGAAGTCCTCGC...TGCACAGTGTTGACCATCGCTCATCGCCTGAACACCGTTCTCAACTGTGACCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000129898.8
ENSMUST00000131806.8
ENSMUST00000156066.8
ENSMUST00000156610.8
3UTR TCA 72 bp GCTCCTGAACTCCTCGATGGAAGATGCGTAAAAGAATaGGGAAGATTACAGCCAGGCCAGCCAGCACCACAA +
Preference number: 3 (lower is better)
Translates to: APELLDGRCVKE*GRLQPGQPAPQ
Trigger: TTGTGGTGCTGGCTGGCCTGGCTGTAATCTTCCTCATTCTTTTACGCATCTTCCATCGAGGAGTTCAGGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000129898.8
ENSMUST00000131806.8
ENSMUST00000156610.8
3UTR TCA 72 bp TCAGGCGATGAGCGATGGTCAACACTGTGCAGCTTTTaGAGGCCTCCTTTATGGTGCTCTGAACAAGGGTGT +
Preference number: 3 (lower is better)
Translates to: SGDERWSTLCSF*RPPLWCSEQGC
Trigger: ACACCCTTGTTCAGAGCACCATAAAGGAGGCCTTCAAAAGCTGCACAGTGTTGACCATCGCTCATCGCCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000129898.8
ENSMUST00000131806.8
ENSMUST00000156066.8
ENSMUST00000156610.8
3UTR TCA 72 bp CCTTCCCATTTTCCATCACCAGGACAAGGTCACAGTTaGGAACGGTGTTCAGGCGATGAGCGATGGTCAACA +
Preference number: 3 (lower is better)
Translates to: PSHFPSPGQGHS*ERCSGDERWST
Trigger: TGTTGACCATCGCTCATCGCCTGAACACCGTTCTCAACTGTGACCTTGTCCTGGTGATGGAAAATGGGAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000129898.8
ENSMUST00000131806.8
ENSMUST00000156066.8
ENSMUST00000156610.8
3UTR GCA 72 bp CAAAGCGATAACCGCTGTTTTACCACTCCTCCTCTATaGAGACAGGGGATGCCTAGCATGTACTCCCAGGTA +
Preference number: 3 (lower is better)
Translates to: QSDNRCFTTPPL*RQGMPSMYSQV
Trigger: TACCTGGGAGTACATGCTAGGCATCCCCTGTCTGCATAGAGGAGGAGTGGTAAAACAGCGGTTATCGCTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000152438.2
3UTR CCA 72 bp TGCTTGCTATGTAAACCAACTGGTACATGTGGTGTTTaGTGTCTTGCAGGGTCTGGTCGACGTTGCAGGCTG +
Preference number: 3 (lower is better)
Translates to: CLLCKPTGTCGV*CLAGSGRRCRL
Trigger: CAGCCTGCAACGTCGACCAGACCCTGCAAGACACCAAACACCACATGTACCAGTTGGTTTACATAGCAAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000129898.8
ENSMUST00000131806.8
ENSMUST00000156610.8
3UTR CCA 72 bp GCAAACCACCTGAGCGCGCAGTTGAAGTACAGGAGGTaGCTGGAGTTTTCGTCGTTGAGTGTCTTAAACTTG +
Preference number: 3 (lower is better)
Translates to: ANHLSAQLKYRR*LEFSSLSVLNL
Trigger: CAAGTTTAAGACACTCAACGACGAAAACTCCAGCCACCTCCTGTACTTCAACTGCGCGCTCAGGTGGTTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000129898.8
ENSMUST00000131806.8
ENSMUST00000156610.8
3UTR CCA 72 bp AACAACTGTATAGATTCATTACTGAGCCAAGGGAGATaGCTGTGGGAGGTCATGTGCTCCATGGGTGGGAGG +
Preference number: 3 (lower is better)
Translates to: NNCIDSLLSQGR*LWEVMCSMGGR
Trigger: CCTCCCACCCATGGAGCACATGACCTCCCACAGCCATCTCCCTTGGCTCAGTAATGAATCTATACAGTTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129898.8
3UTR CCA 72 bp CAGGGTCTCCACCATGGCTACATTGTAAATGTGCTCTaGATCCTTGAATTGCAGTCCCCGGAGGTTGTGGAT +
Preference number: 3 (lower is better)
Translates to: QGLHHGYIVNVL*ILELQSPEVVD
Trigger: ATCCACAACCTCCGGGGACTGCAATTCAAGGATCCAGAGCACATTTACAATGTAGCCATGGTGGAGACCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156610.8
3UTR-3UTR CAA 90 bp GACAATGTTCATGAGAATGTCCATTCTGAGAGCAAACCACCTGAGCGCGCAGTTAGGGTCTGGTCGACGTaGCAGGCTGTCTTATTGTTC +
Preference number: 3 (lower is better)
Translates to: DNVHENVHSESKPPERAVRVWST*QAVLLF
Trigger: GAACAATAAGACAGCCTGCAACGTCGACCAGACCCT...AACTGCGCGCTCAGGTGGTTTGCTCTCAGAATGGACATTCTCATGAACATTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000129898.8
ENSMUST00000131806.8
ENSMUST00000156610.8
3UTR-3UTR CAA 90 bp AGAGCATCTCGTCGGTGTGGCTCCCCAAGGGGTCCAAGTTGTACCTACAAACAGGTGAAGGTAAAGCCTTaGATGATGCCAAACATCAAC +
Preference number: 3 (lower is better)
Translates to: RASRRCGSPRGPSCTYKQVKVKP*MMPNIN
Trigger: GTTGATGTTTGGCATCATCAAAGGCTTTACCTTCAC...CTGTTTGTAGGTACAACTTGGACCCCTTGGGGAGCCACACCGACGAGATGCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000129898.8
3UTR TCA 72 bp GAGACCAGGTACCCTCCAGAAGCCTTGATATACGTGTaGTATGTTTTCCAGGTCACGATTCCTTCTTGGGGG +
Preference number: 3 (lower is better)
Translates to: ETRYPPEALIYV*YVFQVTIPSWG
Trigger: CCCCCAAGAAGGAATCGTGACCTGGAAAACATATCACACGTATATCAAGGCTTCTGGAGGGTACCTGGTCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000129898.8
ENSMUST00000131806.8
ENSMUST00000156610.8
3UTR GCA 72 bp ATTATTGTGTCTCTCATGAACGTTCTTTCCAAAACATaGCAGAGCATCTCGTCGGTGTGGCTCCCCAAGGGG +
Preference number: 3 (lower is better)
Translates to: IIVSLMNVLSKT*QSISSVWLPKG
Trigger: CCCCTTGGGGAGCCACACCGACGAGATGCTCTGGCATGTTTTGGAAAGAACGTTCATGAGAGACACAATAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000129898.8
ENSMUST00000131806.8
ENSMUST00000156610.8
3UTR CCA 72 bp AACTGGTACATGTGGTGTTTGGTGTCTTGCAGGGTCTaGTCGACGTTGCAGGCTGTCTTATTGTTCTGGGAT +
Preference number: 3 (lower is better)
Translates to: NWYMWCLVSCRV*STLQAVLLFWD
Trigger: ATCCCAGAACAATAAGACAGCCTGCAACGTCGACCAGACCCTGCAAGACACCAAACACCACATGTACCAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000129898.8
ENSMUST00000131806.8
ENSMUST00000156610.8
3UTR-3UTR CAA 90 bp CAACCTACCAGCTTTGTCTGCACTCTTCACCATCCAGAACCAACCCTGAGTCTGACACAGACACCATGCTaGCTATGTAAACCAACTGGT +
Preference number: 3 (lower is better)
Translates to: QPTSFVCTLHHPEPTLSLTQTPC*LCKPTG
Trigger: ACCAGTTGGTTTACATAGCAAGCATGGTGTCTGTGT...CAGACTCAGGGTTGGTTCTGGATGGTGAAGAGTGCAGACAAAGCTGGTAGGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000131806.8
ENSMUST00000156610.8
3UTR-3UTR CAA 90 bp CAGGACAAGGTCACAGTTGAGAACGGTGTTCAGGCGATGAGCGATGGTCAACACGTGAAGGTAAAGCCTTaGATGATGCCAAACATCAAC +
Preference number: 3 (lower is better)
Translates to: QDKVTVENGVQAMSDGQHVKVKP*MMPNIN
Trigger: GTTGATGTTTGGCATCATCAAAGGCTTTACCTTCAC...GTGTTGACCATCGCTCATCGCCTGAACACCGTTCTCAACTGTGACCTTGTCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000129898.8
ENSMUST00000131806.8
ENSMUST00000156610.8
3UTR-3UTR CAA 90 bp AAGGTCACAGTTGAGAACGGTGTTCAGGCGATGAGCGATGGTCAACACTGTGCACTGGAGTTTTCGTCGTaGAGTGTCTTAAACTTGCTG +
Preference number: 3 (lower is better)
Translates to: KVTVENGVQAMSDGQHCALEFSS*SVLNLL
Trigger: CAGCAAGTTTAAGACACTCAACGACGAAAACTCCAG...TGCACAGTGTTGACCATCGCTCATCGCCTGAACACCGTTCTCAACTGTGACCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000129898.8
ENSMUST00000131806.8
ENSMUST00000156610.8
3UTR GCA 72 bp GACGCTGTTGGGCTCTGGAAATACAGTGGCAATGTCTaGTCTAGAAAGACCCAGAAATACAAAGAGGGCCTT +
Preference number: 3 (lower is better)
Translates to: DAVGLWKYSGNV*SRKTQKYKEGL
Trigger: AAGGCCCTCTTTGTATTTCTGGGTCTTTCTAGAGCAGACATTGCCACTGTATTTCCAGAGCCCAACAGCGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129898.8
3UTR CCA 72 bp ATCACTCTGAGTTATCAGTACCCACACTGGGGCTACTaGGTAGGTCTTTCCTCTGATCCTCATAGAAGACCT +
Preference number: 3 (lower is better)
Translates to: ITLSYQYPHWGY*VGLSSDPHRRP
Trigger: AGGTCTTCTATGAGGATCAGAGGAAAGACCTACCCAGTAGCCCCAGTGTGGGTACTGATAACTCAGAGTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000129898.8
3UTR CCA 72 bp GTAGCAAACATCACTCTGAGTTATCAGTACCCACACTaGGGCTACTGGGTAGGTCTTTCCTCTGATCCTCAT +
Preference number: 3 (lower is better)
Translates to: VANITLSYQYPH*GYWVGLSSDPH
Trigger: ATGAGGATCAGAGGAAAGACCTACCCAGTAGCCCCAGTGTGGGTACTGATAACTCAGAGTGATGTTTGCTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129898.8
3UTR CCA 72 bp TCCCAACTCAGGAGAGGATGCTGCCCTCATTTAGAGTaGGTTTTCCTTGTTGGCAACTGTATCTGGGAATGT +
Preference number: 3 (lower is better)
Translates to: SQLRRGCCPHLE*VFLVGNCIWEC
Trigger: ACATTCCCAGATACAGTTGCCAACAAGGAAAACCCACTCTAAATGAGGGCAGCATCCTCTCCTGAGTTGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000152438.2
3UTR-3UTR CAA 90 bp TCTCTCATGAACGTTCTTTCCAAAACATGCCAGAGCATCTCGTCGGTGTGGCTCTTGAGTGTCTTAAACTaGCTGATGCAGTCGTCCTTT +
Preference number: 3 (lower is better)
Translates to: SLMNVLSKTCQSISSVWLLSVLN*LMQSSF
Trigger: AAAGGACGACTGCATCAGCAAGTTTAAGACACTCAA...GAGCCACACCGACGAGATGCTCTGGCATGTTTTGGAAAGAACGTTCATGAGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000129898.8
ENSMUST00000131806.8
ENSMUST00000156610.8
3UTR GCA 72 bp TTTATTTCATCTGGGTCCCAACTCAGGAGAGGATGCTaGCCTCATTTAGAGTGGGTTTTCCTTGTTGGCAAC +
Preference number: 3 (lower is better)
Translates to: FISSGSQLRRGC*PHLEWVFLVGN
Trigger: GTTGCCAACAAGGAAAACCCACTCTAAATGAGGGCAGCATCCTCTCCTGAGTTGGGACCCAGATGAAATAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000152438.2
3UTR GCA 72 bp ACTTTTATTTCATCTGGGTCCCAACTCAGGAGAGGATaGTGCCCTCATTTAGAGTGGGTTTTCCTTGTTGGC +
Preference number: 3 (lower is better)
Translates to: TFISSGSQLRRG*CPHLEWVFLVG
Trigger: GCCAACAAGGAAAACCCACTCTAAATGAGGGCAGCATCCTCTCCTGAGTTGGGACCCAGATGAAATAAAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000152438.2
3UTR CCA 72 bp TTGAGAGGTAACAGCTGGACAATGGATGGATCACAGTaGACTGCTGTTCCTCTGATACTTCAAAGGTCAGTC +
Preference number: 3 (lower is better)
Translates to: LRGNSWTMDGSQ*TAVPLILQRSV
Trigger: GACTGACCTTTGAAGTATCAGAGGAACAGCAGTCCACTGTGATCCATCCATTGTCCAGCTGTTACCTCTCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129898.8
3UTR-3UTR CAA 90 bp AATCACCCACAGGACCTTTACAGTCCAACCTCTGCAGCTAGTAACATCGCAAATACACAGACACCATGCTaGCTATGTAAACCAACTGGT +
Preference number: 3 (lower is better)
Translates to: NHPQDLYSPTSAASNIANTQTPC*LCKPTG
Trigger: ACCAGTTGGTTTACATAGCAAGCATGGTGTCTGTGT...ATTTGCGATGTTACTAGCTGCAGAGGTTGGACTGTAAAGGTCCTGTGGGTGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000129898.8
ENSMUST00000131806.8
ENSMUST00000156610.8
3UTR TCA 72 bp AAAGACCACCCCAGCATGGGTACAACTCACAAAAGATaGAGTTCTTGGAGTTTGCTGCAAGGAAATCAGCCA +
Preference number: 3 (lower is better)
Translates to: KDHPSMGTTHKR*SSWSLLQGNQP
Trigger: TGGCTGATTTCCTTGCAGCAAACTCCAAGAACTTCATCTTTTGTGAGTTGTACCCATGCTGGGGTGGTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000129898.8
3UTR-3UTR CAA 90 bp TCTCTCATGAACGTTCTTTCCAAAACATGCCAGAGCATCTCGTCGGTGTGGCTCGGCCATAAAAATAGGTaGTCTTTCCAAATGTGCATA +
Preference number: 3 (lower is better)
Translates to: SLMNVLSKTCQSISSVWLGHKNR*SFQMCI
Trigger: TATGCACATTTGGAAAGACAACCTATTTTTATGGCC...GAGCCACACCGACGAGATGCTCTGGCATGTTTTGGAAAGAACGTTCATGAGAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000131806.8
3UTR-3UTR CAA 90 bp AATCACCCACAGGACCTTTACAGTCCAACCTCTGCAGCTAGTAACATCGCAAATGAAAACCCTTCTCTCTaGTCTGGTAACAAAATCCAG +
Preference number: 3 (lower is better)
Translates to: NHPQDLYSPTSAASNIANENPSL*SGNKIQ
Trigger: CTGGATTTTGTTACCAGACAAGAGAGAAGGGTTTTC...ATTTGCGATGTTACTAGCTGCAGAGGTTGGACTGTAAAGGTCCTGTGGGTGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000156066.8
3UTR CCA 72 bp AGAAGAGAACATTTCAGTCAATTGAGAGGTAACAGCTaGACAATGGATGGATCACAGTGGACTGCTGTTCCT +
Preference number: 3 (lower is better)
Translates to: RREHFSQLRGNS*TMDGSQWTAVP
Trigger: AGGAACAGCAGTCCACTGTGATCCATCCATTGTCCAGCTGTTACCTCTCAATTGACTGAAATGTTCTCTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129898.8
3UTR-3UTR CAA 90 bp ACAAAAGATGAAGTTCTTGGAGTTTGCTGCAAGGAAATCAGCCAGCTGAAGAATGACAATGACAAGCCTTaGGATGAGGCGCTGATTGAA +
Preference number: 3 (lower is better)
Translates to: TKDEVLGVCCKEISQLKNDNDKP*DEALIE
Trigger: TTCAATCAGCGCCTCATCCAAAGGCTTGTCATTGTC...ATTCTTCAGCTGGCTGATTTCCTTGCAGCAAACTCCAAGAACTTCATCTTTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000129898.8
3UTR-3UTR CAA 90 bp TCCTTGTTGGCAACTGTATCTGGGAATGTTCTCAGAAAGAACCCAGTAGAGGGTGATGGTAAATACCGTTaGTGTCCACAAATTCTTCTG +
Preference number: 3 (lower is better)
Translates to: SLLATVSGNVLRKNPVEGDGKYR*CPQILL
Trigger: CAGAAGAATTTGTGGACACAAACGGTATTTACCATC...ACCCTCTACTGGGTTCTTTCTGAGAACATTCCCAGATACAGTTGCCAACAAGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000152438.2
3UTR TCA 72 bp AGCCCCCTTCCTTGCCTTTACTTTATTTCTAGAGATTaGAGCCACACAACACAGAATTCTTTAGGTCTGCGA +
Preference number: 3 (lower is better)
Translates to: SPLPCLYFISRD*SHTTQNSLGLR
Trigger: TCGCAGACCTAAAGAATTCTGTGTTGTGTGGCTTCAATCTCTAGAAATAAAGTAAAGGCAAGGAAGGGGGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000129898.8
3UTR TCA 72 bp GGAGTATTACTGAGAAATGACTCACAGAGAAGTGGATaGCTCAAAGGTTATTGCATCACCCAAAAGACCACC +
Preference number: 3 (lower is better)
Translates to: GVLLRNDSQRSG*LKGYCITQKTT
Trigger: GGTGGTCTTTTGGGTGATGCAATAACCTTTGAGTCATCCACTTCTCTGTGAGTCATTTCTCAGTAATACTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000129898.8
3UTR CCA 72 bp CATTTAGAGTGGGTTTTCCTTGTTGGCAACTGTATCTaGGAATGTTCTCAGAAAGAACCCAGTAGAGGGTTT +
Preference number: 3 (lower is better)
Translates to: HLEWVFLVGNCI*ECSQKEPSRGF
Trigger: AAACCCTCTACTGGGTTCTTTCTGAGAACATTCCCAGATACAGTTGCCAACAAGGAAAACCCACTCTAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000152438.2
3UTR-3UTR CAA 90 bp AGTTTCATTATTGTGTCTCTCATGAACGTTCTTTCCAAAACATGCCAGAGCATCTTGAGTGTCTTAAACTaGCTGATGCAGTCGTCCTTT +
Preference number: 3 (lower is better)
Translates to: SFIIVSLMNVLSKTCQSILSVLN*LMQSSF
Trigger: AAAGGACGACTGCATCAGCAAGTTTAAGACACTCAA...GATGCTCTGGCATGTTTTGGAAAGAACGTTCATGAGAGACACAATAATGAAACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000129898.8
ENSMUST00000131806.8
ENSMUST00000156610.8
3UTR TCA 72 bp TATCTTTTCAGAGATATAATACCTGTTATTGGAAAATaGCGCTGTTGGGCTCTGGAAATACAGTGGCAATGT +
Preference number: 3 (lower is better)
Translates to: YLFRDIIPVIGK*RCWALEIQWQC
Trigger: ACATTGCCACTGTATTTCCAGAGCCCAACAGCGTCATTTTCCAATAACAGGTATTATATCTCTGAAAAGATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000129898.8
CDS-3UTR TCA 90 bp GGCTGTGGCCAGGGCTGCTTGGCTCCATGGTCGGGCTTCTGTTCTCACATGTCCGGGATTCAGTCTGGATaGGCTGGTGAGCGGGAGCGT +
Preference number: 4 (lower is better)
Translates to: GCGQGCLAPWSGFCSHMSGIQSG*AGERER
Trigger: ACGCTCCCGCTCACCAGCTCATCCAGACTGAATCCC...GGACATGTGAGAACAGAAGCCCGACCATGGAGCCAAGCAGCCCTGGCCACAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000156066.8
CDS-3UTR GCA 90 bp AGGGCTGCTTGGCTCCATGGTCGGGCTTCTGTTCTCACATGTCCATCGCCTCCTGCACTGACTTGGGGCTaGCACTTTGCCACTCCGGGC +
Preference number: 4 (lower is better)
Translates to: RAAWLHGRASVLTCPSPPALTWG*HFATPG
Trigger: GCCCGGAGTGGCAAAGTGGCAGCCCCAAGTCAGTGC...AGGAGGCGATGGACATGTGAGAACAGAAGCCCGACCATGGAGCCAAGCAGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080115.10
ENSMUST00000129898.8
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR TCA 90 bp CTGTGGCCAGGGCTGCTTGGCTCCATGGTCGGGCTTCTGTTCTCACATGTCCATGCCCCAAGGCTGCCATaGCGATGCACAGGATGTTGG +
Preference number: 4 (lower is better)
Translates to: LWPGLLGSMVGLLFSHVHAPRLP*RCTGCW
Trigger: CCAACATCCTGTGCATCGTCATGGCAGCCTTGGGGC...ATGGACATGTGAGAACAGAAGCCCGACCATGGAGCCAAGCAGCCCTGGCCACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080115.10
ENSMUST00000129898.8
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR TCA 90 bp AGAACAAGGGACACATCTCAGCCCCAGCTCACCATGTGCTCCATGGGTGGGAGGGGGATTCAGTCTGGATaGGCTGGTGAGCGGGAGCGT +
Preference number: 4 (lower is better)
Translates to: RTRDTSQPQLTMCSMGGRGIQSG*AGERER
Trigger: ACGCTCCCGCTCACCAGCTCATCCAGACTGAATCCC...CCTCCCACCCATGGAGCACATGGTGAGCTGGGGCTGAGATGTGTCCCTTGTTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000156066.8
CDS-3UTR TCA 90 bp GGCTGTGGCCAGGGCTGCTTGGCTCCATGGTCGGGCTTCTGTTCTCACATGTCCGACAGGTCCCCACTTTaGAGGGGTGAGTGTGTTCAG +
Preference number: 4 (lower is better)
Translates to: GCGQGCLAPWSGFCSHMSDRSPL*RGECVQ
Trigger: CTGAACACACTCACCCCTTCAAAGTGGGGACCTGTC...GGACATGTGAGAACAGAAGCCCGACCATGGAGCCAAGCAGCCCTGGCCACAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000156066.8
CDS-3UTR TCA 90 bp AAACATGCCAGAGCATCTCGTCGGTGTGGCTCCCCAAGGGGTCCAAGTTGTACCGCCCCAAGGCTGCCATaGCGATGCACAGGATGTTGG +
Preference number: 4 (lower is better)
Translates to: KHARASRRCGSPRGPSCTAPRLP*RCTGCW
Trigger: CCAACATCCTGTGCATCGTCATGGCAGCCTTGGGGC...GGTACAACTTGGACCCCTTGGGGAGCCACACCGACGAGATGCTCTGGCATGTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000129898.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR TCA 90 bp GTTATCTCCCCTCGGCTCGGCCAGTCTTTGGGACAGGTCCCCACTTTGAAGGGGTGTGCTCTGGATCCTTaGATTGCAGTCCCCGGAGGT +
Preference number: 4 (lower is better)
Translates to: VISPRLGQSLGQVPTLKGCALDP*IAVPGG
Trigger: ACCTCCGGGGACTGCAATTCAAGGATCCAGAGCACA...CCCCTTCAAAGTGGGGACCTGTCCCAAAGACTGGCCGAGCCGAGGGGAGATAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000129898.8
ENSMUST00000131806.8
CDS-3UTR TCA 90 bp GGCTGTGGCCAGGGCTGCTTGGCTCCATGGTCGGGCTTCTGTTCTCACATGTCCGTTCGCACACACACTTaGAGCAATCCACTGAGCTGG +
Preference number: 4 (lower is better)
Translates to: GCGQGCLAPWSGFCSHMSVRTHT*SNPLSW
Trigger: CCAGCTCAGTGGATTGCTTCAAGTGTGTGTGCGAAC...GGACATGTGAGAACAGAAGCCCGACCATGGAGCCAAGCAGCCCTGGCCACAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000156066.8
CDS-3UTR GCA 90 bp AGAACAAGGGACACATCTCAGCCCCAGCTCACCATGTGCTCCATGGGTGGGAGGTGTCGGCCCCAAGGCTaGCATGACGATGCACAGGAT +
Preference number: 4 (lower is better)
Translates to: RTRDTSQPQLTMCSMGGRCRPQG*HDDAQD
Trigger: ATCCTGTGCATCGTCATGGCAGCCTTGGGGCCGACA...CCTCCCACCCATGGAGCACATGGTGAGCTGGGGCTGAGATGTGTCCCTTGTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR GCA 90 bp GTGGCCAGGGCTGCTTGGCTCCATGGTCGGGCTTCTGTTCTCACATGTCCATCGGACGAAACAGGGCCATaGCCAGGGATGATTTTCCGG +
Preference number: 4 (lower is better)
Translates to: VARAAWLHGRASVLTCPSDETGP*PGMIFR
Trigger: CCGGAAAATCATCCCTGGGCATGGCCCTGTTTCGTC...CGATGGACATGTGAGAACAGAAGCCCGACCATGGAGCCAAGCAGCCCTGGCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000156066.8
CDS-3UTR CCA 90 bp AGGGGCTGTGGCCAGGGCTGCTTGGCTCCATGGTCGGGCTTCTGTTCTCACATGCCATTAGGATCGGGATaGTGGCTGGCAAGGGACAAA +
Preference number: 4 (lower is better)
Translates to: RGCGQGCLAPWSGFCSHMPLGSG*WLARDK
Trigger: TTTGTCCCTTGCCAGCCACCATCCCGATCCTAATGG...CATGTGAGAACAGAAGCCCGACCATGGAGCCAAGCAGCCCTGGCCACAGCCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080115.10
ENSMUST00000129898.8
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR CCA 90 bp GGGCTGCTTGGCTCCATGGTCGGGCTTCTGTTCTCACATGTCCATCGCCTCCTCTTCATCCCTCTGAGCTaGGCTCTCCTTCAGGGTCTC +
Preference number: 4 (lower is better)
Translates to: GLLGSMVGLLFSHVHRLLFIPLS*ALLQGL
Trigger: GAGACCCTGAAGGAGAGCCCAGCTCAGAGGGATGAA...GAGGAGGCGATGGACATGTGAGAACAGAAGCCCGACCATGGAGCCAAGCAGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080115.10
ENSMUST00000129898.8
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000156066.8
CDS-3UTR CCA 90 bp AGGGGCTGTGGCCAGGGCTGCTTGGCTCCATGGTCGGGCTTCTGTTCTCACATGGGATCATGGTCAGCTTaGTTCGGAGGTCTTCCAGAC +
Preference number: 4 (lower is better)
Translates to: RGCGQGCLAPWSGFCSHMGSWSA*FGGLPD
Trigger: GTCTGGAAGACCTCCGAACCAAGCTGACCATGATCC...CATGTGAGAACAGAAGCCCGACCATGGAGCCAAGCAGCCCTGGCCACAGCCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000156066.8
CDS-3UTR TCA 90 bp GTATTGGTGAGGACACGTGAGGGACCCTTGGGGTTTTCAGAAGTGAGAGGCAGCGCCCCAAGGCTGCCATaGCGATGCACAGGATGTTGG +
Preference number: 4 (lower is better)
Translates to: VLVRTREGPLGFSEVRGSAPRLP*RCTGCW
Trigger: CCAACATCCTGTGCATCGTCATGGCAGCCTTGGGGC...GCTGCCTCTCACTTCTGAAAACCCCAAGGGTCCCTCACGTGTCCTCACCAATAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR TCA 90 bp AGAACAAGGGACACATCTCAGCCCCAGCTCACCATGTGCTCCATGGGTGGGAGGTGCTGGAGGATTTGGTaGATGAGAACTGTCGGCCCC +
Preference number: 4 (lower is better)
Translates to: RTRDTSQPQLTMCSMGGRCWRIW*MRTVGP
Trigger: GGGGCCGACAGTTCTCATTCACCAAATCCTCCAGCA...CCTCCCACCCATGGAGCACATGGTGAGCTGGGGCTGAGATGTGTCCCTTGTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR TCA 90 bp GGCCAGAAGAACAAGGGACACATCTCAGCCCCAGCTCACCATGTGCTCCATGGGTGTGCTCTGGATCCTTaGATTGCAGTCCCCGGAGGT +
Preference number: 4 (lower is better)
Translates to: GQKNKGHISAPAHHVLHGCALDP*IAVPGG
Trigger: ACCTCCGGGGACTGCAATTCAAGGATCCAGAGCACA...CCCATGGAGCACATGGTGAGCTGGGGCTGAGATGTGTCCCTTGTTCTTCTGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000131806.8
CDS-3UTR TCA 90 bp CCAAGAGAGATGGCCAGAAGAACAAGGGACACATCTCAGCCCCAGCTCACCATGGCGTCTTCATCCCTCTaGGCTGGGCTCTCCTTCAGG +
Preference number: 4 (lower is better)
Translates to: PREMARRTRDTSQPQLTMASSSL*AGLSFR
Trigger: CCTGAAGGAGAGCCCAGCTCAGAGGGATGAAGACGC...CATGGTGAGCTGGGGCTGAGATGTGTCCCTTGTTCTTCTGGCCATCTCTCTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000156066.8
CDS-3UTR TCA 90 bp GTATTGGTGAGGACACGTGAGGGACCCTTGGGGTTTTCAGAAGTGAGAGGCAGCGGGATTCAGTCTGGATaGGCTGGTGAGCGGGAGCGT +
Preference number: 4 (lower is better)
Translates to: VLVRTREGPLGFSEVRGSGIQSG*AGERER
Trigger: ACGCTCCCGCTCACCAGCTCATCCAGACTGAATCCC...GCTGCCTCTCACTTCTGAAAACCCCAAGGGTCCCTCACGTGTCCTCACCAATAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000156066.8
CDS-3UTR TCA 90 bp AGGGCTGCTTGGCTCCATGGTCGGGCTTCTGTTCTCACATGTCCATCGCCTCCTGTGAGAGAACCAAGGTaGCCGGCTGATGTTCTCCAC +
Preference number: 4 (lower is better)
Translates to: RAAWLHGRASVLTCPSPPVREPR*PADVLH
Trigger: GTGGAGAACATCAGCCGGTCACCTTGGTTCTCTCAC...AGGAGGCGATGGACATGTGAGAACAGAAGCCCGACCATGGAGCCAAGCAGCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000156066.8
CDS-3UTR TCA 90 bp AGGGCTGCTTGGCTCCATGGTCGGGCTTCTGTTCTCACATGTCCATCGCCTCCTACGGTGTTCAGGCGATaGGCGATGGTCAACACTGTG +
Preference number: 4 (lower is better)
Translates to: RAAWLHGRASVLTCPSPPTVFRR*AMVNTV
Trigger: CACAGTGTTGACCATCGCTCATCGCCTGAACACCGT...AGGAGGCGATGGACATGTGAGAACAGAAGCCCGACCATGGAGCCAAGCAGCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
CDS-3UTR CCA 90 bp AGAACAAGGGACACATCTCAGCCCCAGCTCACCATGTGCTCCATGGGTGGGAGGGATCGGGATGGTGGCTaGCAAGGGACAAAACAAGGC +
Preference number: 4 (lower is better)
Translates to: RTRDTSQPQLTMCSMGGRDRDGG*QGTKQG
Trigger: GCCTTGTTTTGTCCCTTGCCAGCCACCATCCCGATC...CCTCCCACCCATGGAGCACATGGTGAGCTGGGGCTGAGATGTGTCCCTTGTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR CCA 90 bp GTGGCCAGGGCTGCTTGGCTCCATGGTCGGGCTTCTGTTCTCACATGTCCATCGCCATTAGGATCGGGATaGTGGCTGGCAAGGGACAAA +
Preference number: 4 (lower is better)
Translates to: VARAAWLHGRASVLTCPSPLGSG*WLARDK
Trigger: TTTGTCCCTTGCCAGCCACCATCCCGATCCTAATGG...CGATGGACATGTGAGAACAGAAGCCCGACCATGGAGCCAAGCAGCCCTGGCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080115.10
ENSMUST00000129898.8
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR CCA 90 bp GGGCTGCTTGGCTCCATGGTCGGGCTTCTGTTCTCACATGTCCATCGCCTCCTCTGTGTAGCACTGACTTaGGGCTGCCACTTTGCCACT +
Preference number: 4 (lower is better)
Translates to: GLLGSMVGLLFSHVHRLLCVALT*GCHFAT
Trigger: AGTGGCAAAGTGGCAGCCCCAAGTCAGTGCTACACA...GAGGAGGCGATGGACATGTGAGAACAGAAGCCCGACCATGGAGCCAAGCAGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080115.10
ENSMUST00000129898.8
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR CCA 90 bp GTTATCTCCCCTCGGCTCGGCCAGTCTTTGGGACAGGTCCCCACTTTGAAGGGGTGTGTAGCACTGACTTaGGGCTGCCACTTTGCCACT +
Preference number: 4 (lower is better)
Translates to: VISPRLGQSLGQVPTLKGCVALT*GCHFAT
Trigger: AGTGGCAAAGTGGCAGCCCCAAGTCAGTGCTACACA...CCCCTTCAAAGTGGGGACCTGTCCCAAAGACTGGCCGAGCCGAGGGGAGATAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000129898.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR CCA 90 bp GGCTGTGGCCAGGGCTGCTTGGCTCCATGGTCGGGCTTCTGTTCTCACATGTCCGTCACGATTCCTTCTTaGGGGGATTCAGTCTGGATG +
Preference number: 4 (lower is better)
Translates to: GCGQGCLAPWSGFCSHMSVTIPS*GDSVWM
Trigger: CATCCAGACTGAATCCCCCCAAGAAGGAATCGTGAC...GGACATGTGAGAACAGAAGCCCGACCATGGAGCCAAGCAGCCCTGGCCACAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000156066.8
CDS-3UTR CCA 90 bp AGGGGCTGTGGCCAGGGCTGCTTGGCTCCATGGTCGGGCTTCTGTTCTCACATGACTGTCTGCCCGCTTTaGATGTTCAAGTTCAGGCCA +
Preference number: 4 (lower is better)
Translates to: RGCGQGCLAPWSGFCSHMTVCPL*MFKFRP
Trigger: TGGCCTGAACTTGAACATCCAAAGCGGGCAGACAGT...CATGTGAGAACAGAAGCCCGACCATGGAGCCAAGCAGCCCTGGCCACAGCCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000156066.8
CDS-3UTR CCA 90 bp GGGCTGCTTGGCTCCATGGTCGGGCTTCTGTTCTCACATGTCCATCGCCTCCTCGGATCATGGTCAGCTTaGTTCGGAGGTCTTCCAGAC +
Preference number: 4 (lower is better)
Translates to: GLLGSMVGLLFSHVHRLLGSWSA*FGGLPD
Trigger: GTCTGGAAGACCTCCGAACCAAGCTGACCATGATCC...GAGGAGGCGATGGACATGTGAGAACAGAAGCCCGACCATGGAGCCAAGCAGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000156066.8
CDS-3UTR TCA 90 bp GCCAGAAGAACAAGGGACACATCTCAGCCCCAGCTCACCATGTGCTCCATGGGTGGAGGATTTGGTGAATaGGAACTGTCGGCCCCAAGG +
Preference number: 4 (lower is better)
Translates to: ARRTRDTSQPQLTMCSMGGGFGE*ELSAPR
Trigger: CCTTGGGGCCGACAGTTCTCATTCACCAAATCCTCC...ACCCATGGAGCACATGGTGAGCTGGGGCTGAGATGTGTCCCTTGTTCTTCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR TCA 90 bp GGGCTGCTTGGCTCCATGGTCGGGCTTCTGTTCTCACATGTCCATCGCCTCCTCAATGGGAGCCAGGGCTaGGTTTCCACTTTGGACATA +
Preference number: 4 (lower is better)
Translates to: GLLGSMVGLLFSHVHRLLNGSQG*VSTLDI
Trigger: TATGTCCAAAGTGGAAACTCAGCCCTGGCTCCCATT...GAGGAGGCGATGGACATGTGAGAACAGAAGCCCGACCATGGAGCCAAGCAGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080115.10
ENSMUST00000129898.8
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR TCA 90 bp AGGGCTGCTTGGCTCCATGGTCGGGCTTCTGTTCTCACATGTCCATCGCCTCCTCTTCGGCCACTGCTTTaGCCGAGAAAGGCAAGATTG +
Preference number: 4 (lower is better)
Translates to: RAAWLHGRASVLTCPSPPLRPLL*PRKARL
Trigger: CAATCTTGCCTTTCTCGGTCAAAGCAGTGGCCGAAG...AGGAGGCGATGGACATGTGAGAACAGAAGCCCGACCATGGAGCCAAGCAGCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080115.10
ENSMUST00000129898.8
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR TCA 90 bp GGCCAGAAGAACAAGGGACACATCTCAGCCCCAGCTCACCATGTGCTCCATGGGCCCACTTTGAAGGGGTaGGTGTGTTCAGGAACACAG +
Preference number: 4 (lower is better)
Translates to: GQKNKGHISAPAHHVLHGPTLKG*VCSGTQ
Trigger: CTGTGTTCCTGAACACACTCACCCCTTCAAAGTGGG...CCCATGGAGCACATGGTGAGCTGGGGCTGAGATGTGTCCCTTGTTCTTCTGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000156066.8
CDS-3UTR TCA 90 bp GAACAAGGGACACATCTCAGCCCCAGCTCACCATGTGCTCCATGGGTGGGAGGGACACTGTGCAGCTTTTaGAGGCCTCCTTTATGGTGC +
Preference number: 4 (lower is better)
Translates to: EQGTHLSPSSPCAPWVGGTLCSF*RPPLWC
Trigger: GCACCATAAAGGAGGCCTTCAAAAGCTGCACAGTGT...CCCTCCCACCCATGGAGCACATGGTGAGCTGGGGCTGAGATGTGTCCCTTGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
CDS-3UTR GCA 90 bp GTTATCTCCCCTCGGCTCGGCCAGTCTTTGGGACAGGTCCCCACTTTGAAGGGGGGCAATCACACTAAATaGCACAGGGGCAGTGAGCTT +
Preference number: 4 (lower is better)
Translates to: VISPRLGQSLGQVPTLKGGNHTK*HRGSEL
Trigger: AAGCTCACTGCCCCTGTGGCATTTAGTGTGATTGCC...CCCCTTCAAAGTGGGGACCTGTCCCAAAGACTGGCCGAGCCGAGGGGAGATAAC
57% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENSMUST00000129898.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR GCA 90 bp CTTCCAACCTACCAGCTTTGTCTGCACTCTTCACCATCCAGAACCAACCCTGAGGCACTGACTTGGGGCTaGCACTTTGCCACTCCGGGC +
Preference number: 4 (lower is better)
Translates to: LPTYQLCLHSSPSRTNPEALTWG*HFATPG
Trigger: GCCCGGAGTGGCAAAGTGGCAGCCCCAAGTCAGTGC...CTCAGGGTTGGTTCTGGATGGTGAAGAGTGCAGACAAAGCTGGTAGGTTGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR GCA 90 bp GGCTGTGGCCAGGGCTGCTTGGCTCCATGGTCGGGCTTCTGTTCTCACATGTCCTCCATGGAAGATCCATaGTTGCTGGGAAACGTAAGC +
Preference number: 4 (lower is better)
Translates to: GCGQGCLAPWSGFCSHMSSMEDP*LLGNVS
Trigger: GCTTACGTTTCCCAGCAAGCATGGATCTTCCATGGA...GGACATGTGAGAACAGAAGCCCGACCATGGAGCCAAGCAGCCCTGGCCACAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080115.10
ENSMUST00000129898.8
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR GCA 90 bp CTGTGGCCAGGGCTGCTTGGCTCCATGGTCGGGCTTCTGTTCTCACATGTCCATCAAGACTCCAGGAACTaGAACTGGTGGGTAACCAGC +
Preference number: 4 (lower is better)
Translates to: LWPGLLGSMVGLLFSHVHQDSRN*NWWVTS
Trigger: GCTGGTTACCCACCAGTTGCAGTTCCTGGAGTCTTG...ATGGACATGTGAGAACAGAAGCCCGACCATGGAGCCAAGCAGCCCTGGCCACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000080115.10
ENSMUST00000129898.8
ENSMUST00000131423.8
ENSMUST00000131806.8
CDS-3UTR CCA 90 bp AGGGCTGCTTGGCTCCATGGTCGGGCTTCTGTTCTCACATGTCCATCGCCTCCTCTGTGCGGTAATTTATaGCCCAGGCAAGGGCCCAAA +
Preference number: 4 (lower is better)
Translates to: RAAWLHGRASVLTCPSPPLCGNL*PRQGPK
Trigger: TTTGGGCCCTTGCCTGGGCCATAAATTACCGCACAG...AGGAGGCGATGGACATGTGAGAACAGAAGCCCGACCATGGAGCCAAGCAGCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080115.10
ENSMUST00000129898.8
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR CCA 90 bp GGCCAGAAGAACAAGGGACACATCTCAGCCCCAGCTCACCATGTGCTCCATGGGCCATTAGGATCGGGATaGTGGCTGGCAAGGGACAAA +
Preference number: 4 (lower is better)
Translates to: GQKNKGHISAPAHHVLHGPLGSG*WLARDK
Trigger: TTTGTCCCTTGCCAGCCACCATCCCGATCCTAATGG...CCCATGGAGCACATGGTGAGCTGGGGCTGAGATGTGTCCCTTGTTCTTCTGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR CCA 90 bp AGGGCTGCTTGGCTCCATGGTCGGGCTTCTGTTCTCACATGTCCATCGCCTCCTCTATGGTGGACACAATaGGAGCCAGGGCTGAGTTTC +
Preference number: 4 (lower is better)
Translates to: RAAWLHGRASVLTCPSPPLWWTQ*EPGLSF
Trigger: GAAACTCAGCCCTGGCTCCCATTGTGTCCACCATAG...AGGAGGCGATGGACATGTGAGAACAGAAGCCCGACCATGGAGCCAAGCAGCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080115.10
ENSMUST00000129898.8
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR CCA 90 bp AGGGCTGCTTGGCTCCATGGTCGGGCTTCTGTTCTCACATGTCCATCGCCTCCTTGTGTAGCACTGACTTaGGGCTGCCACTTTGCCACT +
Preference number: 4 (lower is better)
Translates to: RAAWLHGRASVLTCPSPPCVALT*GCHFAT
Trigger: AGTGGCAAAGTGGCAGCCCCAAGTCAGTGCTACACA...AGGAGGCGATGGACATGTGAGAACAGAAGCCCGACCATGGAGCCAAGCAGCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080115.10
ENSMUST00000129898.8
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR CCA 90 bp CTGCCAAGAGAGATGGCCAGAAGAACAAGGGACACATCTCAGCCCCAGCTCACCTTCATCCCTCTGAGCTaGGCTCTCCTTCAGGGTCTC +
Preference number: 4 (lower is better)
Translates to: LPREMARRTRDTSQPQLTFIPLS*ALLQGL
Trigger: GAGACCCTGAAGGAGAGCCCAGCTCAGAGGGATGAA...GGTGAGCTGGGGCTGAGATGTGTCCCTTGTTCTTCTGGCCATCTCTCTTGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000156066.8
CDS-3UTR CCA 90 bp AGAACAAGGGACACATCTCAGCCCCAGCTCACCATGTGCTCCATGGGTGGGAGGGATGGTACCAGAGGCTaGTTCCACCAGACGAAACAG +
Preference number: 4 (lower is better)
Translates to: RTRDTSQPQLTMCSMGGRDGTRG*FHQTKQ
Trigger: CTGTTTCGTCTGGTGGAACCAGCCTCTGGTACCATC...CCTCCCACCCATGGAGCACATGGTGAGCTGGGGCTGAGATGTGTCCCTTGTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000156066.8
CDS-3UTR CCA 90 bp AGGGCTGCTTGGCTCCATGGTCGGGCTTCTGTTCTCACATGTCCATCGCCTCCTGATGGTACCAGAGGCTaGTTCCACCAGACGAAACAG +
Preference number: 4 (lower is better)
Translates to: RAAWLHGRASVLTCPSPPDGTRG*FHQTKQ
Trigger: CTGTTTCGTCTGGTGGAACCAGCCTCTGGTACCATC...AGGAGGCGATGGACATGTGAGAACAGAAGCCCGACCATGGAGCCAAGCAGCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000156066.8
CDS-3UTR CCA 90 bp GCCAGAAGAACAAGGGACACATCTCAGCCCCAGCTCACCATGTGCTCCATGGGTGATCCTGGGGGATCATaGTCAGCTTGGTTCGGAGGT +
Preference number: 4 (lower is better)
Translates to: ARRTRDTSQPQLTMCSMGDPGGS*SAWFGG
Trigger: ACCTCCGAACCAAGCTGACCATGATCCCCCAGGATC...ACCCATGGAGCACATGGTGAGCTGGGGCTGAGATGTGTCCCTTGTTCTTCTGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000156066.8
CDS-3UTR CCA 90 bp AGGGCTGCTTGGCTCCATGGTCGGGCTTCTGTTCTCACATGTCCATCGCCTCCTAACAGGACAGGATCCTaGGGGATCATGGTCAGCTTG +
Preference number: 4 (lower is better)
Translates to: RAAWLHGRASVLTCPSPPNRTGS*GIMVSL
Trigger: CAAGCTGACCATGATCCCCCAGGATCCTGTCCTGTT...AGGAGGCGATGGACATGTGAGAACAGAAGCCCGACCATGGAGCCAAGCAGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000156066.8
CDS-3UTR TCA 90 bp AGGACACGTGAGGGACCCTTGGGGTTTTCAGAAGTGAGAGGCAGCTTCCAACCTGGAGGATTTGGTGAATaGGAACTGTCGGCCCCAAGG +
Preference number: 4 (lower is better)
Translates to: RTREGPLGFSEVRGSFQPGGFGE*ELSAPR
Trigger: CCTTGGGGCCGACAGTTCTCATTCACCAAATCCTCC...AGGTTGGAAGCTGCCTCTCACTTCTGAAAACCCCAAGGGTCCCTCACGTGTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR TCA 90 bp GTCCATTCTGAGAGCAAACCACCTGAGCGCGCAGTTGAAGTACAGGAGGTGGCTGGAGGATTTGGTGAATaGGAACTGTCGGCCCCAAGG +
Preference number: 4 (lower is better)
Translates to: VHSESKPPERAVEVQEVAGGFGE*ELSAPR
Trigger: CCTTGGGGCCGACAGTTCTCATTCACCAAATCCTCC...AGCCACCTCCTGTACTTCAACTGCGCGCTCAGGTGGTTTGCTCTCAGAATGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000129898.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR TCA 90 bp GATCATGGTCAGCTTGGTTCGGAGGTCTTCCAGACCCACAGTGCAGATGTCCACTGCTGGAGGATTTGGTaGATGAGAACTGTCGGCCCC +
Preference number: 4 (lower is better)
Translates to: DHGQLGSEVFQTHSADVHCWRIW*MRTVGP
Trigger: GGGGCCGACAGTTCTCATTCACCAAATCCTCCAGCA...GTGGACATCTGCACTGTGGGTCTGGAAGACCTCCGAACCAAGCTGACCATGATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000129898.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR TCA 90 bp GCCAGAAGAACAAGGGACACATCTCAGCCCCAGCTCACCATGTGCTCCATGGGTCTGTGGACCCCAGAATaGAAAAGGCGTACACTGCAC +
Preference number: 4 (lower is better)
Translates to: ARRTRDTSQPQLTMCSMGLWTPE*KRRTLH
Trigger: GTGCAGTGTACGCCTTTTTCATTCTGGGGTCCACAG...ACCCATGGAGCACATGGTGAGCTGGGGCTGAGATGTGTCCCTTGTTCTTCTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR TCA 90 bp GGCGTGGATGACGCCCAGACCCTGTATGGAGGAGGTGATGTGAGAGAACCAAGGAATGGGAGCCAGGGCTaGGTTTCCACTTTGGACATA +
Preference number: 4 (lower is better)
Translates to: GVDDAQTLYGGGDVREPRNGSQG*VSTLDI
Trigger: TATGTCCAAAGTGGAAACTCAGCCCTGGCTCCCATT...CCTTGGTTCTCTCACATCACCTCCTCCATACAGGGTCTGGGCGTCATCCACGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000129898.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR TCA 90 bp TCCGGAGCCCGTCCTTCCCACAATCCCAACTGTCTGCCCGCTTTGGATGTTCAAATGCCACAGGGGCAGTaGGCTTGCGTTTCAGGAAAA +
Preference number: 4 (lower is better)
Translates to: SGARPSHNPNCLPALDVQMPQGQ*ACVSGK
Trigger: TTTTCCTGAAACGCAAGCTCACTGCCCCTGTGGCAT...TTGAACATCCAAAGCGGGCAGACAGTTGGGATTGTGGGAAGGACGGGCTCCGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000129898.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR TCA 90 bp TGCCAAGAGAGATGGCCAGAAGAACAAGGGACACATCTCAGCCCCAGCTCACCATGTGCTCTGGATCCTTaGATTGCAGTCCCCGGAGGT +
Preference number: 4 (lower is better)
Translates to: CQERWPEEQGTHLSPSSPCALDP*IAVPGG
Trigger: ACCTCCGGGGACTGCAATTCAAGGATCCAGAGCACA...TGGTGAGCTGGGGCTGAGATGTGTCCCTTGTTCTTCTGGCCATCTCTCTTGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000131806.8
CDS-3UTR TCA 90 bp ACCAGCTTTGTCTGCACTCTTCACCATCCAGAACCAACCCTGAGTCTGCCAAGAGCGTCTTCATCCCTCTaGGCTGGGCTCTCCTTCAGG +
Preference number: 4 (lower is better)
Translates to: TSFVCTLHHPEPTLSLPRASSSL*AGLSFR
Trigger: CCTGAAGGAGAGCCCAGCTCAGAGGGATGAAGACGC...TCTTGGCAGACTCAGGGTTGGTTCTGGATGGTGAAGAGTGCAGACAAAGCTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000156066.8
CDS-3UTR TCA 90 bp AAGGTCACAGTTGAGAACGGTGTTCAGGCGATGAGCGATGGTCAACACTGTGCAGCGTCTTCATCCCTCTaGGCTGGGCTCTCCTTCAGG +
Preference number: 4 (lower is better)
Translates to: KVTVENGVQAMSDGQHCAASSSL*AGLSFR
Trigger: CCTGAAGGAGAGCCCAGCTCAGAGGGATGAAGACGC...TGCACAGTGTTGACCATCGCTCATCGCCTGAACACCGTTCTCAACTGTGACCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000129898.8
ENSMUST00000131806.8
ENSMUST00000156066.8
CDS-3UTR TCA 90 bp AGAGGCAGCTTCCAACCTACCAGCTTTGTCTGCACTCTTCACCATCCAGAACCAGCGTCTTCATCCCTCTaGGCTGGGCTCTCCTTCAGG +
Preference number: 4 (lower is better)
Translates to: RGSFQPTSFVCTLHHPEPASSSL*AGLSFR
Trigger: CCTGAAGGAGAGCCCAGCTCAGAGGGATGAAGACGC...TGGTTCTGGATGGTGAAGAGTGCAGACAAAGCTGGTAGGTTGGAAGCTGCCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000156066.8
CDS-3UTR TCA 90 bp AGAAGAACAAGGGACACATCTCAGCCCCAGCTCACCATGTGCTCCATGGGTGGGACCTGCTTGAGCTCCTaGACTCCTCGATGGAAGATG +
Preference number: 4 (lower is better)
Translates to: RRTRDTSQPQLTMCSMGGTCLSS*TPRWKM
Trigger: CATCTTCCATCGAGGAGTTCAGGAGCTCAAGCAGGT...CCCACCCATGGAGCACATGGTGAGCTGGGGCTGAGATGTGTCCCTTGTTCTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000156066.8
CDS-3UTR TCA 90 bp TTGGTGAGGACACGTGAGGGACCCTTGGGGTTTTCAGAAGTGAGAGGCAGCTTCACGGTGTTCAGGCGATaGGCGATGGTCAACACTGTG +
Preference number: 4 (lower is better)
Translates to: LVRTREGPLGFSEVRGSFTVFRR*AMVNTV
Trigger: CACAGTGTTGACCATCGCTCATCGCCTGAACACCGT...GAAGCTGCCTCTCACTTCTGAAAACCCCAAGGGTCCCTCACGTGTCCTCACCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
CDS-3UTR GCA 90 bp CTGTGGCCAGGGCTGCTTGGCTCCATGGTCGGGCTTCTGTTCTCACATGTCCATGGCAATCACACTAAATaGCACAGGGGCAGTGAGCTT +
Preference number: 4 (lower is better)
Translates to: LWPGLLGSMVGLLFSHVHGNHTK*HRGSEL
Trigger: AAGCTCACTGCCCCTGTGGCATTTAGTGTGATTGCC...ATGGACATGTGAGAACAGAAGCCCGACCATGGAGCCAAGCAGCCCTGGCCACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080115.10
ENSMUST00000129898.8
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR GCA 90 bp TTTCCCCACTTTTATTTCATCTGGGTCCCAACTCAGGAGAGGATGCTGCCCTCAGCACTGACTTGGGGCTaGCACTTTGCCACTCCGGGC +
Preference number: 4 (lower is better)
Translates to: FPHFYFIWVPTQERMLPSALTWG*HFATPG
Trigger: GCCCGGAGTGGCAAAGTGGCAGCCCCAAGTCAGTGC...TGAGGGCAGCATCCTCTCCTGAGTTGGGACCCAGATGAAATAAAAGTGGGGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000152438.2
CDS-3UTR GCA 90 bp GGGCTGCTTGGCTCCATGGTCGGGCTTCTGTTCTCACATGTCCATCGCCTCCTCACCCCTTTCTGTAACTaGATCTGTCCTAGGAGAGCT +
Preference number: 4 (lower is better)
Translates to: GLLGSMVGLLFSHVHRLLTPFCN*ICPRRA
Trigger: AGCTCTCCTAGGACAGATGCAGTTACAGAAAGGGGT...GAGGAGGCGATGGACATGTGAGAACAGAAGCCCGACCATGGAGCCAAGCAGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080115.10
ENSMUST00000129898.8
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR GCA 90 bp GGGCTGCTTGGCTCCATGGTCGGGCTTCTGTTCTCACATGTCCATCGCCTCCTCTCCATGGAAGATCCATaGTTGCTGGGAAACGTAAGC +
Preference number: 4 (lower is better)
Translates to: GLLGSMVGLLFSHVHRLLSMEDP*LLGNVS
Trigger: GCTTACGTTTCCCAGCAAGCATGGATCTTCCATGGA...GAGGAGGCGATGGACATGTGAGAACAGAAGCCCGACCATGGAGCCAAGCAGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080115.10
ENSMUST00000129898.8
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR GCA 90 bp GTCCTTGAACGTTATCTCCCCTCGGCTCGGCCAGTCTTTGGGACAGGTCCCCACTCCATGGAAGATCCATaGTTGCTGGGAAACGTAAGC +
Preference number: 4 (lower is better)
Translates to: VLERYLPSARPVFGTGPHSMEDP*LLGNVS
Trigger: GCTTACGTTTCCCAGCAAGCATGGATCTTCCATGGA...GTGGGGACCTGTCCCAAAGACTGGCCGAGCCGAGGGGAGATAACGTTCAAGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000129898.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR GCA 90 bp AGGGCTGCTTGGCTCCATGGTCGGGCTTCTGTTCTCACATGTCCATCGCCTCCTCATTCTTCAAAGACATaGTTCCCCACGTGGGCATCC +
Preference number: 4 (lower is better)
Translates to: RAAWLHGRASVLTCPSPPHSSKT*FPTWAS
Trigger: GGATGCCCACGTGGGGAAGCATGTCTTTGAAGAATG...AGGAGGCGATGGACATGTGAGAACAGAAGCCCGACCATGGAGCCAAGCAGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080115.10
ENSMUST00000129898.8
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR GCA 90 bp GCCAGAAGAACAAGGGACACATCTCAGCCCCAGCTCACCATGTGCTCCATGGGTCAAGACTCCAGGAACTaGAACTGGTGGGTAACCAGC +
Preference number: 4 (lower is better)
Translates to: ARRTRDTSQPQLTMCSMGQDSRN*NWWVTS
Trigger: GCTGGTTACCCACCAGTTGCAGTTCCTGGAGTCTTG...ACCCATGGAGCACATGGTGAGCTGGGGCTGAGATGTGTCCCTTGTTCTTCTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000131806.8
CDS-3UTR GCA 90 bp TGCCAAGAGAGATGGCCAGAAGAACAAGGGACACATCTCAGCCCCAGCTCACCAGACGAAACAGGGCCATaGCCAGGGATGATTTTCCGG +
Preference number: 4 (lower is better)
Translates to: CQERWPEEQGTHLSPSSPDETGP*PGMIFR
Trigger: CCGGAAAATCATCCCTGGGCATGGCCCTGTTTCGTC...TGGTGAGCTGGGGCTGAGATGTGTCCCTTGTTCTTCTGGCCATCTCTCTTGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000156066.8
CDS-3UTR CCA 90 bp GCCAGAAGAACAAGGGACACATCTCAGCCCCAGCTCACCATGTGCTCCATGGGTCTATGGTGGACACAATaGGAGCCAGGGCTGAGTTTC +
Preference number: 4 (lower is better)
Translates to: ARRTRDTSQPQLTMCSMGLWWTQ*EPGLSF
Trigger: GAAACTCAGCCCTGGCTCCCATTGTGTCCACCATAG...ACCCATGGAGCACATGGTGAGCTGGGGCTGAGATGTGTCCCTTGTTCTTCTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR CCA 90 bp AGAGAGATGGCCAGAAGAACAAGGGACACATCTCAGCCCCAGCTCACCATGTGCGATGCACAGACGACCTaGGAACCCCTGTCTAACCAG +
Preference number: 4 (lower is better)
Translates to: REMARRTRDTSQPQLTMCDAQTT*EPLSNQ
Trigger: CTGGTTAGACAGGGGTTCCCAGGTCGTCTGTGCATC...GCACATGGTGAGCTGGGGCTGAGATGTGTCCCTTGTTCTTCTGGCCATCTCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000156066.8
CDS-3UTR CCA 90 bp AGAACAAGGGACACATCTCAGCCCCAGCTCACCATGTGCTCCATGGGTGGGAGGGGTACATGTGGTGTTTaGTGTCTTGCAGGGTCTGGT +
Preference number: 4 (lower is better)
Translates to: RTRDTSQPQLTMCSMGGRGTCGV*CLAGSG
Trigger: ACCAGACCCTGCAAGACACCAAACACCACATGTACC...CCTCCCACCCATGGAGCACATGGTGAGCTGGGGCTGAGATGTGTCCCTTGTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000156066.8
3UTR CAA 72 bp ACAAACAGGACAGGATCCTGGGGGATCATGGTCAGCTaGGTTCGGAGGTCTTCCAGACCCACAGTGCAGATG +
Preference number: 4 (lower is better)
Translates to: TNRTGSWGIMVS*VRRSSRPTVQM
Trigger: CATCTGCACTGTGGGTCTGGAAGACCTCCGAACCAAGCTGACCATGATCCCCCAGGATCCTGTCCTGTTTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000129898.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR TCA 90 bp TCTGTATCTCATCCGATAGTCCTTGAACGTTATCTCCCCTCGGCTCGGCCAGTCTGCTGGAGGATTTGGTaGATGAGAACTGTCGGCCCC +
Preference number: 4 (lower is better)
Translates to: SVSHPIVLERYLPSARPVCWRIW*MRTVGP
Trigger: GGGGCCGACAGTTCTCATTCACCAAATCCTCCAGCA...GACTGGCCGAGCCGAGGGGAGATAACGTTCAAGGACTATCGGATGAGATACAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000129898.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR TCA 90 bp AGGGCTGCTTGGCTCCATGGTCGGGCTTCTGTTCTCACATGTCCATCGCCTCCTTCGCCTGCAGAGATGTaGGTTAACGTCTTAAAGGAC +
Preference number: 4 (lower is better)
Translates to: RAAWLHGRASVLTCPSPPSPAEM*VNVLKD
Trigger: GTCCTTTAAGACGTTAACTCACATCTCTGCAGGCGA...AGGAGGCGATGGACATGTGAGAACAGAAGCCCGACCATGGAGCCAAGCAGCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080115.10
ENSMUST00000129898.8
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR TCA 90 bp CTCGGCGTGAAACGGCAGCCTCACGTCCAGCTCGTCCATGTCTTTAGAGAAGCGTCGCCTGCAGAGATGTaGGTTAACGTCTTAAAGGAC +
Preference number: 4 (lower is better)
Translates to: LGVKRQPHVQLVHVFREASPAEM*VNVLKD
Trigger: GTCCTTTAAGACGTTAACTCACATCTCTGCAGGCGA...CGCTTCTCTAAAGACATGGACGAGCTGGACGTGAGGCTGCCGTTTCACGCCGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000129898.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR TCA 90 bp AGGGGCTGTGGCCAGGGCTGCTTGGCTCCATGGTCGGGCTTCTGTTCTCACATGAACTCATTCATTGTCTaGACCCGTTTGTCTGTCACT +
Preference number: 4 (lower is better)
Translates to: RGCGQGCLAPWSGFCSHMNSFIV*TRLSVT
Trigger: AGTGACAGACAAACGGGTTCAGACAATGAATGAGTT...CATGTGAGAACAGAAGCCCGACCATGGAGCCAAGCAGCCCTGGCCACAGCCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080115.10
ENSMUST00000129898.8
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR TCA 90 bp CTGCCAAGAGAGATGGCCAGAAGAACAAGGGACACATCTCAGCCCCAGCTCACCAATGGGAGCCAGGGCTaGGTTTCCACTTTGGACATA +
Preference number: 4 (lower is better)
Translates to: LPREMARRTRDTSQPQLTNGSQG*VSTLDI
Trigger: TATGTCCAAAGTGGAAACTCAGCCCTGGCTCCCATT...GGTGAGCTGGGGCTGAGATGTGTCCCTTGTTCTTCTGGCCATCTCTCTTGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR TCA 90 bp GATCATGGTCAGCTTGGTTCGGAGGTCTTCCAGACCCACAGTGCAGATGTCCACCTTCGGCCACTGCTTTaGCCGAGAAAGGCAAGATTG +
Preference number: 4 (lower is better)
Translates to: DHGQLGSEVFQTHSADVHLRPLL*PRKARL
Trigger: CAATCTTGCCTTTCTCGGTCAAAGCAGTGGCCGAAG...GTGGACATCTGCACTGTGGGTCTGGAAGACCTCCGAACCAAGCTGACCATGATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000129898.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR TCA 90 bp GGCCAGAAGAACAAGGGACACATCTCAGCCCCAGCTCACCATGTGCTCCATGGGTGGAGACCACAGACATaGACTGTGTGTTGGTACCTT +
Preference number: 4 (lower is better)
Translates to: GQKNKGHISAPAHHVLHGWRPQT*TVCWYL
Trigger: AAGGTACCAACACACAGTTCATGTCTGTGGTCTCCA...CCCATGGAGCACATGGTGAGCTGGGGCTGAGATGTGTCCCTTGTTCTTCTGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR TCA 90 bp GCAGACAGGGGATGCCTAGCATGTACTCCCAGGTACACAGCCAAGGGAAAAGATTGTGCTCTGGATCCTTaGATTGCAGTCCCCGGAGGT +
Preference number: 4 (lower is better)
Translates to: ADRGCLACTPRYTAKGKDCALDP*IAVPGG
Trigger: ACCTCCGGGGACTGCAATTCAAGGATCCAGAGCACA...ATCTTTTCCCTTGGCTGTGTACCTGGGAGTACATGCTAGGCATCCCCTGTCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000152438.2
CDS-3UTR TCA 90 bp TCTCTCATGAACGTTCTTTCCAAAACATGCCAGAGCATCTCGTCGGTGTGGCTCGCGTCTTCATCCCTCTaGGCTGGGCTCTCCTTCAGG +
Preference number: 4 (lower is better)
Translates to: SLMNVLSKTCQSISSVWLASSSL*AGLSFR
Trigger: CCTGAAGGAGAGCCCAGCTCAGAGGGATGAAGACGC...GAGCCACACCGACGAGATGCTCTGGCATGTTTTGGAAAGAACGTTCATGAGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000129898.8
ENSMUST00000131806.8
CDS-3UTR TCA 90 bp CCAAGAGAGATGGCCAGAAGAACAAGGGACACATCTCAGCCCCAGCTCACCATGTGTTCTCCACCTGCTTaGGCTCCTGAACTCCTCGAT +
Preference number: 4 (lower is better)
Translates to: PREMARRTRDTSQPQLTMCSPPA*APELLD
Trigger: ATCGAGGAGTTCAGGAGCTCAAGCAGGTGGAGAACA...CATGGTGAGCTGGGGCTGAGATGTGTCCCTTGTTCTTCTGGCCATCTCTCTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000156066.8
CDS-3UTR TCA 90 bp GAGTCTGCCAAGAGAGATGGCCAGAAGAACAAGGGACACATCTCAGCCCCAGCTGTTCGCACACACACTTaGAGCAATCCACTGAGCTGG +
Preference number: 4 (lower is better)
Translates to: ESAKRDGQKNKGHISAPAVRTHT*SNPLSW
Trigger: CCAGCTCAGTGGATTGCTTCAAGTGTGTGTGCGAAC...AGCTGGGGCTGAGATGTGTCCCTTGTTCTTCTGGCCATCTCTCTTGGCAGACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000156066.8
CDS-3UTR GCA 90 bp CCCATTCTCAGACATTATGTAGTATTGGTGAGGACACGTGAGGGACCCTTGGGGTGTCGGCCCCAAGGCTaGCATGACGATGCACAGGAT +
Preference number: 4 (lower is better)
Translates to: PILRHYVVLVRTREGPLGCRPQG*HDDAQD
Trigger: ATCCTGTGCATCGTCATGGCAGCCTTGGGGCCGACA...CCCCAAGGGTCCCTCACGTGTCCTCACCAATACTACATAATGTCTGAGAATGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR GCA 90 bp GACAATGTTCATGAGAATGTCCATTCTGAGAGCAAACCACCTGAGCGCGCAGTTGCACTGACTTGGGGCTaGCACTTTGCCACTCCGGGC +
Preference number: 4 (lower is better)
Translates to: DNVHENVHSESKPPERAVALTWG*HFATPG
Trigger: GCCCGGAGTGGCAAAGTGGCAGCCCCAAGTCAGTGC...AACTGCGCGCTCAGGTGGTTTGCTCTCAGAATGGACATTCTCATGAACATTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000129898.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR GCA 90 bp CTCAGACATTATGTAGTATTGGTGAGGACACGTGAGGGACCCTTGGGGTTTTCAGCACTGACTTGGGGCTaGCACTTTGCCACTCCGGGC +
Preference number: 4 (lower is better)
Translates to: LRHYVVLVRTREGPLGFSALTWG*HFATPG
Trigger: GCCCGGAGTGGCAAAGTGGCAGCCCCAAGTCAGTGC...TGAAAACCCCAAGGGTCCCTCACGTGTCCTCACCAATACTACATAATGTCTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR GCA 90 bp AGAGAGATGGCCAGAAGAACAAGGGACACATCTCAGCCCCAGCTCACCATGTGCCAAGACTCCAGGAACTaGAACTGGTGGGTAACCAGC +
Preference number: 4 (lower is better)
Translates to: REMARRTRDTSQPQLTMCQDSRN*NWWVTS
Trigger: GCTGGTTACCCACCAGTTGCAGTTCCTGGAGTCTTG...GCACATGGTGAGCTGGGGCTGAGATGTGTCCCTTGTTCTTCTGGCCATCTCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000131806.8
CDS-3UTR GCA 90 bp GAAGAACAAGGGACACATCTCAGCCCCAGCTCACCATGTGCTCCATGGGTGGGAAGGCCTCCTTTATGGTaGTCTGAACAAGGGTGTCTG +
Preference number: 4 (lower is better)
Translates to: EEQGTHLSPSSPCAPWVGRPPLW*SEQGCL
Trigger: CAGACACCCTTGTTCAGAGCACCATAAAGGAGGCCT...TCCCACCCATGGAGCACATGGTGAGCTGGGGCTGAGATGTGTCCCTTGTTCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
CDS-3UTR CCA 90 bp CCCACAGTGCAGATGTCCACCTCGTCAATGATGATGGTACCAGAGGCTGGTTCCTGTGTAGCACTGACTTaGGGCTGCCACTTTGCCACT +
Preference number: 4 (lower is better)
Translates to: PTVQMSTSSMMMVPEAGSCVALT*GCHFAT
Trigger: AGTGGCAAAGTGGCAGCCCCAAGTCAGTGCTACACA...GGAACCAGCCTCTGGTACCATCATCATTGACGAGGTGGACATCTGCACTGTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000129898.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR CCA 90 bp GTTGCAGGCTGTCTTATTGTTCTGGGATGCACAGACGACCTGGGAACCCCTGTCTGTGTAGCACTGACTTaGGGCTGCCACTTTGCCACT +
Preference number: 4 (lower is better)
Translates to: VAGCLIVLGCTDDLGTPVCVALT*GCHFAT
Trigger: AGTGGCAAAGTGGCAGCCCCAAGTCAGTGCTACACA...GACAGGGGTTCCCAGGTCGTCTGTGCATCCCAGAACAATAAGACAGCCTGCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000129898.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR CCA 90 bp AGAACAAGGGACACATCTCAGCCCCAGCTCACCATGTGCTCCATGGGTGGGAGGTCCATCAACTCCTTGTaGGTGCCCTTTTCACAGATC +
Preference number: 4 (lower is better)
Translates to: RTRDTSQPQLTMCSMGGRSINSL*VPFSQI
Trigger: GATCTGTGAAAAGGGCACCCACAAGGAGTTGATGGA...CCTCCCACCCATGGAGCACATGGTGAGCTGGGGCTGAGATGTGTCCCTTGTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000131806.8
CDS-3UTR CCA 90 bp GGCGTGGATGACGCCCAGACCCTGTATGGAGGAGGTGATGTGAGAGAACCAAGGTCCATCAACTCCTTGTaGGTGCCCTTTTCACAGATC +
Preference number: 4 (lower is better)
Translates to: GVDDAQTLYGGGDVREPRSINSL*VPFSQI
Trigger: GATCTGTGAAAAGGGCACCCACAAGGAGTTGATGGA...CCTTGGTTCTCTCACATCACCTCCTCCATACAGGGTCTGGGCGTCATCCACGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000129898.8
ENSMUST00000131806.8
CDS-3UTR CCA 90 bp CAAGAGAGATGGCCAGAAGAACAAGGGACACATCTCAGCCCCAGCTCACCATGTTTCATCCCTCTGAGCTaGGCTCTCCTTCAGGGTCTC +
Preference number: 4 (lower is better)
Translates to: QERWPEEQGTHLSPSSPCFIPLS*ALLQGL
Trigger: GAGACCCTGAAGGAGAGCCCAGCTCAGAGGGATGAA...ACATGGTGAGCTGGGGCTGAGATGTGTCCCTTGTTCTTCTGGCCATCTCTCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000156066.8
CDS-3UTR CCA 90 bp GCAGACAGGGGATGCCTAGCATGTACTCCCAGGTACACAGCCAAGGGAAAAGATTTCATCCCTCTGAGCTaGGCTCTCCTTCAGGGTCTC +
Preference number: 4 (lower is better)
Translates to: ADRGCLACTPRYTAKGKDFIPLS*ALLQGL
Trigger: GAGACCCTGAAGGAGAGCCCAGCTCAGAGGGATGAA...ATCTTTTCCCTTGGCTGTGTACCTGGGAGTACATGCTAGGCATCCCCTGTCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000152438.2
CDS-3UTR CCA 90 bp AGAAGAACAAGGGACACATCTCAGCCCCAGCTCACCATGTGCTCCATGGGTGGGGTCACGATTCCTTCTTaGGGGGATTCAGTCTGGATG +
Preference number: 4 (lower is better)
Translates to: RRTRDTSQPQLTMCSMGGVTIPS*GDSVWM
Trigger: CATCCAGACTGAATCCCCCCAAGAAGGAATCGTGAC...CCCACCCATGGAGCACATGGTGAGCTGGGGCTGAGATGTGTCCCTTGTTCTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000156066.8
CDS-3UTR CCA 90 bp CACTCTTCACCATCCAGAACCAACCCTGAGTCTGCCAAGAGAGATGGCCAGAAGGATGCACAGACGACCTaGGAACCCCTGTCTAACCAG +
Preference number: 4 (lower is better)
Translates to: HSSPSRTNPESAKRDGQKDAQTT*EPLSNQ
Trigger: CTGGTTAGACAGGGGTTCCCAGGTCGTCTGTGCATC...CTTCTGGCCATCTCTCTTGGCAGACTCAGGGTTGGTTCTGGATGGTGAAGAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000156066.8
CDS-3UTR CCA 90 bp CACCATCCAGAACCAACCCTGAGTCTGCCAAGAGAGATGGCCAGAAGAACAAGGGATGCACAGACGACCTaGGAACCCCTGTCTAACCAG +
Preference number: 4 (lower is better)
Translates to: HHPEPTLSLPREMARRTRDAQTT*EPLSNQ
Trigger: CTGGTTAGACAGGGGTTCCCAGGTCGTCTGTGCATC...CCTTGTTCTTCTGGCCATCTCTCTTGGCAGACTCAGGGTTGGTTCTGGATGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000156066.8
CDS-3UTR CCA 90 bp TTGGTGAGGACACGTGAGGGACCCTTGGGGTTTTCAGAAGTGAGAGGCAGCTTCGAGGTGAACTTGGCTTaGGTCTCTGTTCCTGTTCGC +
Preference number: 4 (lower is better)
Translates to: LVRTREGPLGFSEVRGSFEVNLA*VSVPVR
Trigger: GCGAACAGGAACAGAGACCCAAGCCAAGTTCACCTC...GAAGCTGCCTCTCACTTCTGAAAACCCCAAGGGTCCCTCACGTGTCCTCACCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000156066.8
CDS-3UTR CCA 90 bp CTGCCAAGAGAGATGGCCAGAAGAACAAGGGACACATCTCAGCCCCAGCTCACCACTGTCTGCCCGCTTTaGATGTTCAAGTTCAGGCCA +
Preference number: 4 (lower is better)
Translates to: LPREMARRTRDTSQPQLTTVCPL*MFKFRP
Trigger: TGGCCTGAACTTGAACATCCAAAGCGGGCAGACAGT...GGTGAGCTGGGGCTGAGATGTGTCCCTTGTTCTTCTGGCCATCTCTCTTGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000156066.8
3UTR CAA 72 bp AGCATCTCGTCGGTGTGGCTCCCCAAGGGGTCCAAGTaGTACCTTACTGTACCTACAAACAGGACAGGATCC +
Preference number: 4 (lower is better)
Translates to: SISSVWLPKGSK*YLTVPTNRTGS
Trigger: GGATCCTGTCCTGTTTGTAGGTACAGTAAGGTACAACTTGGACCCCTTGGGGAGCCACACCGACGAGATGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR TCA 90 bp CTCTCAAATCACCCACAGGACCTTTACAGTCCAACCTCTGCAGCTAGTAACATCGCCCCAAGGCTGCCATaGCGATGCACAGGATGTTGG +
Preference number: 4 (lower is better)
Translates to: LSNHPQDLYSPTSAASNIAPRLP*RCTGCW
Trigger: CCAACATCCTGTGCATCGTCATGGCAGCCTTGGGGC...GATGTTACTAGCTGCAGAGGTTGGACTGTAAAGGTCCTGTGGGTGATTTGAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000129898.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR TCA 90 bp ACTCTTCACCATCCAGAACCAACCCTGAGTCTGCCAAGAGAGATGGCCAGAAGAGGAGGATTTGGTGAATaGGAACTGTCGGCCCCAAGG +
Preference number: 4 (lower is better)
Translates to: TLHHPEPTLSLPREMARRGGFGE*ELSAPR
Trigger: CCTTGGGGCCGACAGTTCTCATTCACCAAATCCTCC...TCTTCTGGCCATCTCTCTTGGCAGACTCAGGGTTGGTTCTGGATGGTGAAGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR TCA 90 bp ACCAGCTTTGTCTGCACTCTTCACCATCCAGAACCAACCCTGAGTCTGCCAAGATGCTGGAGGATTTGGTaGATGAGAACTGTCGGCCCC +
Preference number: 4 (lower is better)
Translates to: TSFVCTLHHPEPTLSLPRCWRIW*MRTVGP
Trigger: GGGGCCGACAGTTCTCATTCACCAAATCCTCCAGCA...TCTTGGCAGACTCAGGGTTGGTTCTGGATGGTGAAGAGTGCAGACAAAGCTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR TCA 90 bp AACTGTCTGCCCGCTTTGGATGTTCAAGTTCAGGCCATCAAGAACGAGAGGGGTTGCTGGAGGATTTGGTaGATGAGAACTGTCGGCCCC +
Preference number: 4 (lower is better)
Translates to: NCLPALDVQVQAIKNERGCWRIW*MRTVGP
Trigger: GGGGCCGACAGTTCTCATTCACCAAATCCTCCAGCA...ACCCCTCTCGTTCTTGATGGCCTGAACTTGAACATCCAAAGCGGGCAGACAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000129898.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR TCA 90 bp CTGCCAAGAGAGATGGCCAGAAGAACAAGGGACACATCTCAGCCCCAGCTCACCTCGCCTGCAGAGATGTaGGTTAACGTCTTAAAGGAC +
Preference number: 4 (lower is better)
Translates to: LPREMARRTRDTSQPQLTSPAEM*VNVLKD
Trigger: GTCCTTTAAGACGTTAACTCACATCTCTGCAGGCGA...GGTGAGCTGGGGCTGAGATGTGTCCCTTGTTCTTCTGGCCATCTCTCTTGGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR TCA 90 bp GTTGCAGGCTGTCTTATTGTTCTGGGATGCACAGACGACCTGGGAACCCCTGTCAATGGGAGCCAGGGCTaGGTTTCCACTTTGGACATA +
Preference number: 4 (lower is better)
Translates to: VAGCLIVLGCTDDLGTPVNGSQG*VSTLDI
Trigger: TATGTCCAAAGTGGAAACTCAGCCCTGGCTCCCATT...GACAGGGGTTCCCAGGTCGTCTGTGCATCCCAGAACAATAAGACAGCCTGCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000129898.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR TCA 90 bp CACTCTTCACCATCCAGAACCAACCCTGAGTCTGCCAAGAGAGATGGCCAGAAGATGCCACAGGGGCAGTaGGCTTGCGTTTCAGGAAAA +
Preference number: 4 (lower is better)
Translates to: HSSPSRTNPESAKRDGQKMPQGQ*ACVSGK
Trigger: TTTTCCTGAAACGCAAGCTCACTGCCCCTGTGGCAT...CTTCTGGCCATCTCTCTTGGCAGACTCAGGGTTGGTTCTGGATGGTGAAGAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR TCA 90 bp GATCATGGTCAGCTTGGTTCGGAGGTCTTCCAGACCCACAGTGCAGATGTCCACGGTCTTCAGGTTGAGTaGTGTAGGATGGGGGACTTT +
Preference number: 4 (lower is better)
Translates to: DHGQLGSEVFQTHSADVHGLQVE*CRMGDF
Trigger: AAAGTCCCCCATCCTACATCACTCAACCTGAAGACC...GTGGACATCTGCACTGTGGGTCTGGAAGACCTCCGAACCAAGCTGACCATGATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000129898.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR TCA 90 bp CACCATCCAGAACCAACCCTGAGTCTGCCAAGAGAGATGGCCAGAAGAACAAGGACCTGCTTGAGCTCCTaGACTCCTCGATGGAAGATG +
Preference number: 4 (lower is better)
Translates to: HHPEPTLSLPREMARRTRTCLSS*TPRWKM
Trigger: CATCTTCCATCGAGGAGTTCAGGAGCTCAAGCAGGT...CCTTGTTCTTCTGGCCATCTCTCTTGGCAGACTCAGGGTTGGTTCTGGATGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000156066.8
CDS-3UTR TCA 90 bp CCAACCCTGAGTCTGCCAAGAGAGATGGCCAGAAGAACAAGGGACACATCTCAGCCCACTTTGAAGGGGTaGGTGTGTTCAGGAACACAG +
Preference number: 4 (lower is better)
Translates to: PTLSLPREMARRTRDTSQPTLKG*VCSGTQ
Trigger: CTGTGTTCCTGAACACACTCACCCCTTCAAAGTGGG...CTGAGATGTGTCCCTTGTTCTTCTGGCCATCTCTCTTGGCAGACTCAGGGTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000156066.8
CDS-3UTR TCA 90 bp AGGACACGTGAGGGACCCTTGGGGTTTTCAGAAGTGAGAGGCAGCTTCCAACCTACACTGTGCAGCTTTTaGAGGCCTCCTTTATGGTGC +
Preference number: 4 (lower is better)
Translates to: RTREGPLGFSEVRGSFQPTLCSF*RPPLWC
Trigger: GCACCATAAAGGAGGCCTTCAAAAGCTGCACAGTGT...AGGTTGGAAGCTGCCTCTCACTTCTGAAAACCCCAAGGGTCCCTCACGTGTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
CDS-3UTR GCA 90 bp TCTCTCATGAACGTTCTTTCCAAAACATGCCAGAGCATCTCGTCGGTGTGGCTCTGTCGGCCCCAAGGCTaGCATGACGATGCACAGGAT +
Preference number: 4 (lower is better)
Translates to: SLMNVLSKTCQSISSVWLCRPQG*HDDAQD
Trigger: ATCCTGTGCATCGTCATGGCAGCCTTGGGGCCGACA...GAGCCACACCGACGAGATGCTCTGGCATGTTTTGGAAAGAACGTTCATGAGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000129898.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR GCA 90 bp GTTGCAGGCTGTCTTATTGTTCTGGGATGCACAGACGACCTGGGAACCCCTGTCCATTCTTCAAAGACATaGTTCCCCACGTGGGCATCC +
Preference number: 4 (lower is better)
Translates to: VAGCLIVLGCTDDLGTPVHSSKT*FPTWAS
Trigger: GGATGCCCACGTGGGGAAGCATGTCTTTGAAGAATG...GACAGGGGTTCCCAGGTCGTCTGTGCATCCCAGAACAATAAGACAGCCTGCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000129898.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR GCA 90 bp CTTCCAACCTACCAGCTTTGTCTGCACTCTTCACCATCCAGAACCAACCCTGAGGACGAAACAGGGCCATaGCCAGGGATGATTTTCCGG +
Preference number: 4 (lower is better)
Translates to: LPTYQLCLHSSPSRTNPEDETGP*PGMIFR
Trigger: CCGGAAAATCATCCCTGGGCATGGCCCTGTTTCGTC...CTCAGGGTTGGTTCTGGATGGTGAAGAGTGCAGACAAAGCTGGTAGGTTGGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000156066.8
CDS-3UTR GCA 90 bp GAAGAACAAGGGACACATCTCAGCCCCAGCTCACCATGTGCTCCATGGGTGGGATCTGAGATCCAGATGTaGCTTCCACGTTTGTGTCCA +
Preference number: 4 (lower is better)
Translates to: EEQGTHLSPSSPCAPWVGSEIQM*LPRLCP
Trigger: TGGACACAAACGTGGAAGGCACATCTGGATCTCAGA...TCCCACCCATGGAGCACATGGTGAGCTGGGGCTGAGATGTGTCCCTTGTTCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000131806.8
CDS-3UTR CCA 90 bp AAACTGCTGCAGAAAGTTCTCGGCGTGAAACGGCAGCCTCACGTCCAGCTCGTCTCATGGTTTTCAGGCTaGGGTCATATCTCTCGGCAA +
Preference number: 4 (lower is better)
Translates to: KLLQKVLGVKRQPHVQLVSWFSG*GHISRQ
Trigger: TTGCCGAGAGATATGACCCCAGCCTGAAAACCATGA...GACGAGCTGGACGTGAGGCTGCCGTTTCACGCCGAGAACTTTCTGCAGCAGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000129898.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR CCA 90 bp ACCAGCTTTGTCTGCACTCTTCACCATCCAGAACCAACCCTGAGTCTGCCAAGAGATCGGGATGGTGGCTaGCAAGGGACAAAACAAGGC +
Preference number: 4 (lower is better)
Translates to: TSFVCTLHHPEPTLSLPRDRDGG*QGTKQG
Trigger: GCCTTGTTTTGTCCCTTGCCAGCCACCATCCCGATC...TCTTGGCAGACTCAGGGTTGGTTCTGGATGGTGAAGAGTGCAGACAAAGCTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR CCA 90 bp CAACTGTCTGCCCGCTTTGGATGTTCAAGTTCAGGCCATCAAGAACGAGAGGGGCCATTAGGATCGGGATaGTGGCTGGCAAGGGACAAA +
Preference number: 4 (lower is better)
Translates to: QLSARFGCSSSGHQEREGPLGSG*WLARDK
Trigger: TTTGTCCCTTGCCAGCCACCATCCCGATCCTAATGG...CCCCTCTCGTTCTTGATGGCCTGAACTTGAACATCCAAAGCGGGCAGACAGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000129898.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR CCA 90 bp AAGAGAGATGGCCAGAAGAACAAGGGACACATCTCAGCCCCAGCTCACCATGTGCTATGGTGGACACAATaGGAGCCAGGGCTGAGTTTC +
Preference number: 4 (lower is better)
Translates to: KRDGQKNKGHISAPAHHVLWWTQ*EPGLSF
Trigger: GAAACTCAGCCCTGGCTCCCATTGTGTCCACCATAG...CACATGGTGAGCTGGGGCTGAGATGTGTCCCTTGTTCTTCTGGCCATCTCTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR CCA 90 bp GGCAGCTTCCAACCTACCAGCTTTGTCTGCACTCTTCACCATCCAGAACCAACCACACAATGGCTATGGTaGACACAATGGGAGCCAGGG +
Preference number: 4 (lower is better)
Translates to: GSFQPTSFVCTLHHPEPTTQWLW*TQWEPG
Trigger: CCCTGGCTCCCATTGTGTCCACCATAGCCATTGTGT...GGTTGGTTCTGGATGGTGAAGAGTGCAGACAAAGCTGGTAGGTTGGAAGCTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR CCA 90 bp CACCATCCAGAACCAACCCTGAGTCTGCCAAGAGAGATGGCCAGAAGAACAAGGACACAATGGCTATGGTaGACACAATGGGAGCCAGGG +
Preference number: 4 (lower is better)
Translates to: HHPEPTLSLPREMARRTRTQWLW*TQWEPG
Trigger: CCCTGGCTCCCATTGTGTCCACCATAGCCATTGTGT...CCTTGTTCTTCTGGCCATCTCTCTTGGCAGACTCAGGGTTGGTTCTGGATGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR CCA 90 bp CCATCCAGAACCAACCCTGAGTCTGCCAAGAGAGATGGCCAGAAGAACAAGGGAACACAATGGCTATGGTaGACACAATGGGAGCCAGGG +
Preference number: 4 (lower is better)
Translates to: PSRTNPESAKRDGQKNKGTQWLW*TQWEPG
Trigger: CCCTGGCTCCCATTGTGTCCACCATAGCCATTGTGT...TCCCTTGTTCTTCTGGCCATCTCTCTTGGCAGACTCAGGGTTGGTTCTGGATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR CCA 90 bp GGGCTGCTTGGCTCCATGGTCGGGCTTCTGTTCTCACATGTCCATCGCCTCCTCCGTTTCAGGAAAATGTaGCAGGTGAAAGTAGACACA +
Preference number: 4 (lower is better)
Translates to: GLLGSMVGLLFSHVHRLLRFRKM*QVKVDT
Trigger: TGTGTCTACTTTCACCTGCCACATTTTCCTGAAACG...GAGGAGGCGATGGACATGTGAGAACAGAAGCCCGACCATGGAGCCAAGCAGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080115.10
ENSMUST00000129898.8
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR CCA 90 bp CTGCCAAGAGAGATGGCCAGAAGAACAAGGGACACATCTCAGCCCCAGCTCACCTCCCTCACATTTCCATaGAAGATCCATGCTTGCTGG +
Preference number: 4 (lower is better)
Translates to: LPREMARRTRDTSQPQLTSLTFP*KIHACW
Trigger: CCAGCAAGCATGGATCTTCCATGGAAATGTGAGGGA...GGTGAGCTGGGGCTGAGATGTGTCCCTTGTTCTTCTGGCCATCTCTCTTGGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR CCA 90 bp AAGGTCACAGTTGAGAACGGTGTTCAGGCGATGAGCGATGGTCAACACTGTGCATTCATCCCTCTGAGCTaGGCTCTCCTTCAGGGTCTC +
Preference number: 4 (lower is better)
Translates to: KVTVENGVQAMSDGQHCAFIPLS*ALLQGL
Trigger: GAGACCCTGAAGGAGAGCCCAGCTCAGAGGGATGAA...TGCACAGTGTTGACCATCGCTCATCGCCTGAACACCGTTCTCAACTGTGACCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000129898.8
ENSMUST00000131806.8
ENSMUST00000156066.8
CDS-3UTR CCA 90 bp AGAGGCAGCTTCCAACCTACCAGCTTTGTCTGCACTCTTCACCATCCAGAACCAGATCCTGGGGGATCATaGTCAGCTTGGTTCGGAGGT +
Preference number: 4 (lower is better)
Translates to: RGSFQPTSFVCTLHHPEPDPGGS*SAWFGG
Trigger: ACCTCCGAACCAAGCTGACCATGATCCCCCAGGATC...TGGTTCTGGATGGTGAAGAGTGCAGACAAAGCTGGTAGGTTGGAAGCTGCCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000156066.8
3UTR CAA 72 bp ATGTGGTGTTTGGTGTCTTGCAGGGTCTGGTCGACGTaGCAGGCTGTCTTATTGTTCTGGGATGCACAGACG +
Preference number: 4 (lower is better)
Translates to: MWCLVSCRVWST*QAVLLFWDAQT
Trigger: CGTCTGTGCATCCCAGAACAATAAGACAGCCTGCAACGTCGACCAGACCCTGCAAGACACCAAACACCACAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000129898.8
ENSMUST00000131806.8
ENSMUST00000156610.8
3UTR CAA 72 bp ATGTCCATTCTGAGAGCAAACCACCTGAGCGCGCAGTaGAAGTACAGGAGGTGGCTGGAGTTTTCGTCGTTG +
Preference number: 4 (lower is better)
Translates to: MSILRANHLSAQ*KYRRWLEFSSL
Trigger: CAACGACGAAAACTCCAGCCACCTCCTGTACTTCAACTGCGCGCTCAGGTGGTTTGCTCTCAGAATGGACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000129898.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR TCA 90 bp GTCCATTCTGAGAGCAAACCACCTGAGCGCGCAGTTGAAGTACAGGAGGTGGCTGGAATCTCTTGGCGTTaGTGTCCGATGAGTCATAAG +
Preference number: 4 (lower is better)
Translates to: VHSESKPPERAVEVQEVAGISWR*CPMSHK
Trigger: CTTATGACTCATCGGACATCAACGCCAAGAGATTCC...AGCCACCTCCTGTACTTCAACTGCGCGCTCAGGTGGTTTGCTCTCAGAATGGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000129898.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR TCA 90 bp CCAAGAGAGATGGCCAGAAGAACAAGGGACACATCTCAGCCCCAGCTCACCATGGGAATCTCTTGGCGTTaGTGTCCGATGAGTCATAAG +
Preference number: 4 (lower is better)
Translates to: PREMARRTRDTSQPQLTMGISWR*CPMSHK
Trigger: CTTATGACTCATCGGACATCAACGCCAAGAGATTCC...CATGGTGAGCTGGGGCTGAGATGTGTCCCTTGTTCTTCTGGCCATCTCTCTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR TCA 90 bp ACCAGCTTTGTCTGCACTCTTCACCATCCAGAACCAACCCTGAGTCTGCCAAGACTGTGGACCCCAGAATaGAAAAGGCGTACACTGCAC +
Preference number: 4 (lower is better)
Translates to: TSFVCTLHHPEPTLSLPRLWTPE*KRRTLH
Trigger: GTGCAGTGTACGCCTTTTTCATTCTGGGGTCCACAG...TCTTGGCAGACTCAGGGTTGGTTCTGGATGGTGAAGAGTGCAGACAAAGCTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR TCA 90 bp CCCATTCTCAGACATTATGTAGTATTGGTGAGGACACGTGAGGGACCCTTGGGGATGCCACAGGGGCAGTaGGCTTGCGTTTCAGGAAAA +
Preference number: 4 (lower is better)
Translates to: PILRHYVVLVRTREGPLGMPQGQ*ACVSGK
Trigger: TTTTCCTGAAACGCAAGCTCACTGCCCCTGTGGCAT...CCCCAAGGGTCCCTCACGTGTCCTCACCAATACTACATAATGTCTGAGAATGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR TCA 90 bp TCTTCACCATCCAGAACCAACCCTGAGTCTGCCAAGAGAGATGGCCAGAAGAACATGCCACAGGGGCAGTaGGCTTGCGTTTCAGGAAAA +
Preference number: 4 (lower is better)
Translates to: SSPSRTNPESAKRDGQKNMPQGQ*ACVSGK
Trigger: TTTTCCTGAAACGCAAGCTCACTGCCCCTGTGGCAT...GTTCTTCTGGCCATCTCTCTTGGCAGACTCAGGGTTGGTTCTGGATGGTGAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR TCA 90 bp AAGGTCACAGTTGAGAACGGTGTTCAGGCGATGAGCGATGGTCAACACTGTGCAATGCCACAGGGGCAGTaGGCTTGCGTTTCAGGAAAA +
Preference number: 4 (lower is better)
Translates to: KVTVENGVQAMSDGQHCAMPQGQ*ACVSGK
Trigger: TTTTCCTGAAACGCAAGCTCACTGCCCCTGTGGCAT...TGCACAGTGTTGACCATCGCTCATCGCCTGAACACCGTTCTCAACTGTGACCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000129898.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR TCA 90 bp ACCAGCTTTGTCTGCACTCTTCACCATCCAGAACCAACCCTGAGTCTGCCAAGACTTCGGCCACTGCTTTaGCCGAGAAAGGCAAGATTG +
Preference number: 4 (lower is better)
Translates to: TSFVCTLHHPEPTLSLPRLRPLL*PRKARL
Trigger: CAATCTTGCCTTTCTCGGTCAAAGCAGTGGCCGAAG...TCTTGGCAGACTCAGGGTTGGTTCTGGATGGTGAAGAGTGCAGACAAAGCTGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR TCA 90 bp CACCATCCAGAACCAACCCTGAGTCTGCCAAGAGAGATGGCCAGAAGAACAAGGGGTCTTCAGGTTGAGTaGTGTAGGATGGGGGACTTT +
Preference number: 4 (lower is better)
Translates to: HHPEPTLSLPREMARRTRGLQVE*CRMGDF
Trigger: AAAGTCCCCCATCCTACATCACTCAACCTGAAGACC...CCTTGTTCTTCTGGCCATCTCTCTTGGCAGACTCAGGGTTGGTTCTGGATGGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR TCA 90 bp CTGCCAAGAGAGATGGCCAGAAGAACAAGGGACACATCTCAGCCCCAGCTCACCCTGGCCTCTGTTTCTTaGAAACGTGCCTTTTCTGAA +
Preference number: 4 (lower is better)
Translates to: LPREMARRTRDTSQPQLTLASVS*KRAFSE
Trigger: TTCAGAAAAGGCACGTTTTCAAGAAACAGAGGCCAG...GGTGAGCTGGGGCTGAGATGTGTCCCTTGTTCTTCTGGCCATCTCTCTTGGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR TCA 90 bp GTATTGGTGAGGACACGTGAGGGACCCTTGGGGTTTTCAGAAGTGAGAGGCAGCTGGAGACCACAGACATaGACTGTGTGTTGGTACCTT +
Preference number: 4 (lower is better)
Translates to: VLVRTREGPLGFSEVRGSWRPQT*TVCWYL
Trigger: AAGGTACCAACACACAGTTCATGTCTGTGGTCTCCA...GCTGCCTCTCACTTCTGAAAACCCCAAGGGTCCCTCACGTGTCCTCACCAATAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR TCA 90 bp GGTCGACGTTGCAGGCTGTCTTATTGTTCTGGGATGCACAGACGACCTGGGAACTGGAGACCACAGACATaGACTGTGTGTTGGTACCTT +
Preference number: 4 (lower is better)
Translates to: GRRCRLSYCSGMHRRPGNWRPQT*TVCWYL
Trigger: AAGGTACCAACACACAGTTCATGTCTGTGGTCTCCA...GTTCCCAGGTCGTCTGTGCATCCCAGAACAATAAGACAGCCTGCAACGTCGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000129898.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR TCA 90 bp CAGCTTTGTCTGCACTCTTCACCATCCAGAACCAACCCTGAGTCTGCCAAGAGATGTTCTCCACCTGCTTaGGCTCCTGAACTCCTCGAT +
Preference number: 4 (lower is better)
Translates to: QLCLHSSPSRTNPESAKRCSPPA*APELLD
Trigger: ATCGAGGAGTTCAGGAGCTCAAGCAGGTGGAGAACA...TCTCTTGGCAGACTCAGGGTTGGTTCTGGATGGTGAAGAGTGCAGACAAAGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000156066.8
CDS-3UTR TCA 90 bp TCTTCACCATCCAGAACCAACCCTGAGTCTGCCAAGAGAGATGGCCAGAAGAACTGTTCTCCACCTGCTTaGGCTCCTGAACTCCTCGAT +
Preference number: 4 (lower is better)
Translates to: SSPSRTNPESAKRDGQKNCSPPA*APELLD
Trigger: ATCGAGGAGTTCAGGAGCTCAAGCAGGTGGAGAACA...GTTCTTCTGGCCATCTCTCTTGGCAGACTCAGGGTTGGTTCTGGATGGTGAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000156066.8
CDS-3UTR TCA 90 bp CCCATTCTCAGACATTATGTAGTATTGGTGAGGACACGTGAGGGACCCTTGGGGGTTCGCACACACACTTaGAGCAATCCACTGAGCTGG +
Preference number: 4 (lower is better)
Translates to: PILRHYVVLVRTREGPLGVRTHT*SNPLSW
Trigger: CCAGCTCAGTGGATTGCTTCAAGTGTGTGTGCGAAC...CCCCAAGGGTCCCTCACGTGTCCTCACCAATACTACATAATGTCTGAGAATGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000156066.8
CDS-3UTR TCA 90 bp TCTTCACCATCCAGAACCAACCCTGAGTCTGCCAAGAGAGATGGCCAGAAGAACCCCACTTTGAAGGGGTaGGTGTGTTCAGGAACACAG +
Preference number: 4 (lower is better)
Translates to: SSPSRTNPESAKRDGQKNPTLKG*VCSGTQ
Trigger: CTGTGTTCCTGAACACACTCACCCCTTCAAAGTGGG...GTTCTTCTGGCCATCTCTCTTGGCAGACTCAGGGTTGGTTCTGGATGGTGAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000156066.8
CDS-3UTR GCA 90 bp CCAACCCTGAGTCTGCCAAGAGAGATGGCCAGAAGAACAAGGGACACATCTCAGGGCAATCACACTAAATaGCACAGGGGCAGTGAGCTT +
Preference number: 4 (lower is better)
Translates to: PTLSLPREMARRTRDTSQGNHTK*HRGSEL
Trigger: AAGCTCACTGCCCCTGTGGCATTTAGTGTGATTGCC...CTGAGATGTGTCCCTTGTTCTTCTGGCCATCTCTCTTGGCAGACTCAGGGTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR GCA 90 bp TGCAGACAGGGGATGCCTAGCATGTACTCCCAGGTACACAGCCAAGGGAAAAGAGGCAATCACACTAAATaGCACAGGGGCAGTGAGCTT +
Preference number: 4 (lower is better)
Translates to: CRQGMPSMYSQVHSQGKRGNHTK*HRGSEL
Trigger: AAGCTCACTGCCCCTGTGGCATTTAGTGTGATTGCC...TCTTTTCCCTTGGCTGTGTACCTGGGAGTACATGCTAGGCATCCCCTGTCTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000152438.2
CDS-3UTR GCA 90 bp GATCATGGTCAGCTTGGTTCGGAGGTCTTCCAGACCCACAGTGCAGATGTCCACTCCATGGAAGATCCATaGTTGCTGGGAAACGTAAGC +
Preference number: 4 (lower is better)
Translates to: DHGQLGSEVFQTHSADVHSMEDP*LLGNVS
Trigger: GCTTACGTTTCCCAGCAAGCATGGATCTTCCATGGA...GTGGACATCTGCACTGTGGGTCTGGAAGACCTCCGAACCAAGCTGACCATGATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000129898.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR GCA 90 bp CCCACAGTGCAGATGTCCACCTCGTCAATGATGATGGTACCAGAGGCTGGTTCCTCCATGGAAGATCCATaGTTGCTGGGAAACGTAAGC +
Preference number: 4 (lower is better)
Translates to: PTVQMSTSSMMMVPEAGSSMEDP*LLGNVS
Trigger: GCTTACGTTTCCCAGCAAGCATGGATCTTCCATGGA...GGAACCAGCCTCTGGTACCATCATCATTGACGAGGTGGACATCTGCACTGTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000129898.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR GCA 90 bp CACCATCCAGAACCAACCCTGAGTCTGCCAAGAGAGATGGCCAGAAGAACAAGGCATTCTTCAAAGACATaGTTCCCCACGTGGGCATCC +
Preference number: 4 (lower is better)
Translates to: HHPEPTLSLPREMARRTRHSSKT*FPTWAS
Trigger: GGATGCCCACGTGGGGAAGCATGTCTTTGAAGAATG...CCTTGTTCTTCTGGCCATCTCTCTTGGCAGACTCAGGGTTGGTTCTGGATGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR GCA 90 bp CAACTGTCTGCCCGCTTTGGATGTTCAAGTTCAGGCCATCAAGAACGAGAGGGGCATTCTTCAAAGACATaGTTCCCCACGTGGGCATCC +
Preference number: 4 (lower is better)
Translates to: QLSARFGCSSSGHQEREGHSSKT*FPTWAS
Trigger: GGATGCCCACGTGGGGAAGCATGTCTTTGAAGAATG...CCCCTCTCGTTCTTGATGGCCTGAACTTGAACATCCAAAGCGGGCAGACAGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000129898.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR GCA 90 bp GAGTCTGCCAAGAGAGATGGCCAGAAGAACAAGGGACACATCTCAGCCCCAGCTACAATCCCAACTGTCTaGCCGCTTTGGATGTTCAAG +
Preference number: 4 (lower is better)
Translates to: ESAKRDGQKNKGHISAPATIPTV*PLWMFK
Trigger: CTTGAACATCCAAAGCGGGCAGACAGTTGGGATTGT...AGCTGGGGCTGAGATGTGTCCCTTGTTCTTCTGGCCATCTCTCTTGGCAGACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000156066.8
CDS-3UTR CCA 90 bp TGCCAAGAGAGATGGCCAGAAGAACAAGGGACACATCTCAGCCCCAGCTCACCATCATGGTTTTCAGGCTaGGGTCATATCTCTCGGCAA +
Preference number: 4 (lower is better)
Translates to: CQERWPEEQGTHLSPSSPSWFSG*GHISRQ
Trigger: TTGCCGAGAGATATGACCCCAGCCTGAAAACCATGA...TGGTGAGCTGGGGCTGAGATGTGTCCCTTGTTCTTCTGGCCATCTCTCTTGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR CCA 90 bp CAGCTTTGTCTGCACTCTTCACCATCCAGAACCAACCCTGAGTCTGCCAAGAGAGTCGCACTGGGATCATaGTTTTCAGGCTGGGGTCAT +
Preference number: 4 (lower is better)
Translates to: QLCLHSSPSRTNPESAKRVALGS*FSGWGH
Trigger: ATGACCCCAGCCTGAAAACCATGATCCCAGTGCGAC...TCTCTTGGCAGACTCAGGGTTGGTTCTGGATGGTGAAGAGTGCAGACAAAGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR CCA 90 bp AGAAGAACAAGGGACACATCTCAGCCCCAGCTCACCATGTGCTCCATGGGTGGGTCTTCCCAAAGGATCTaGAATCTCTTGGCGTTGATG +
Preference number: 4 (lower is better)
Translates to: RRTRDTSQPQLTMCSMGGSSQRI*NLLALM
Trigger: CATCAACGCCAAGAGATTCCAGATCCTTTGGGAAGA...CCCACCCATGGAGCACATGGTGAGCTGGGGCTGAGATGTGTCCCTTGTTCTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR CCA 90 bp TTGGTGAGGACACGTGAGGGACCCTTGGGGTTTTCAGAAGTGAGAGGCAGCTTCCGATGCACAGGATGTTaGCTACAACGTCCATCAGAA +
Preference number: 4 (lower is better)
Translates to: LVRTREGPLGFSEVRGSFRCTGC*LQRPSE
Trigger: TTCTGATGGACGTTGTAGCCAACATCCTGTGCATCG...GAAGCTGCCTCTCACTTCTGAAAACCCCAAGGGTCCCTCACGTGTCCTCACCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR CCA 90 bp CTCTATGCAGACAGGGGATGCCTAGCATGTACTCCCAGGTACACAGCCAAGGGACGATGCACAGGATGTTaGCTACAACGTCCATCAGAA +
Preference number: 4 (lower is better)
Translates to: LYADRGCLACTPRYTAKGRCTGC*LQRPSE
Trigger: TTCTGATGGACGTTGTAGCCAACATCCTGTGCATCG...TCCCTTGGCTGTGTACCTGGGAGTACATGCTAGGCATCCCCTGTCTGCATAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000152438.2
CDS-3UTR CCA 90 bp ACCAGCTTTGTCTGCACTCTTCACCATCCAGAACCAACCCTGAGTCTGCCAAGACTGTGCGGTAATTTATaGCCCAGGCAAGGGCCCAAA +
Preference number: 4 (lower is better)
Translates to: TSFVCTLHHPEPTLSLPRLCGNL*PRQGPK
Trigger: TTTGGGCCCTTGCCTGGGCCATAAATTACCGCACAG...TCTTGGCAGACTCAGGGTTGGTTCTGGATGGTGAAGAGTGCAGACAAAGCTGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR CCA 90 bp TTTGAATTACGGAGAAGTGCCCGGGCCATACAAAGCAGCTGGCGTTCTCCTACTCTGTGCGGTAATTTATaGCCCAGGCAAGGGCCCAAA +
Preference number: 4 (lower is better)
Translates to: FELRRSARAIQSSWRSPTLCGNL*PRQGPK
Trigger: TTTGGGCCCTTGCCTGGGCCATAAATTACCGCACAG...AGTAGGAGAACGCCAGCTGCTTTGTATGGCCCGGGCACTTCTCCGTAATTCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000129898.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR CCA 90 bp TCAGGAAGAAGAGACACAAAACCAGGAAGGAGACCAGGTACCCTCCAGAAGCCTCTGTGCGGTAATTTATaGCCCAGGCAAGGGCCCAAA +
Preference number: 4 (lower is better)
Translates to: SGRRDTKPGRRPGTLQKPLCGNL*PRQGPK
Trigger: TTTGGGCCCTTGCCTGGGCCATAAATTACCGCACAG...AGGCTTCTGGAGGGTACCTGGTCTCCTTCCTGGTTTTGTGTCTCTTCTTCCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000129898.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR CCA 90 bp GATTCATTACTGAGCCAAGGGAGATGGCTGTGGGAGGTCATGTGCTCCATGGGTTTTCGAAGATTAGCGTaGAGAGGGCCACCTTCAGTC +
Preference number: 4 (lower is better)
Translates to: DSLLSQGRWLWEVMCSMGFRRLA*RGPPSV
Trigger: GACTGAAGGTGGCCCTCTCCACGCTAATCTTCGAAA...ACCCATGGAGCACATGACCTCCCACAGCCATCTCCCTTGGCTCAGTAATGAATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000129898.8
CDS-3UTR CCA 90 bp CAAGAGAGATGGCCAGAAGAACAAGGGACACATCTCAGCCCCAGCTCACCATGTTTAGGATCGGGATGGTaGCTGGCAAGGGACAAAACA +
Preference number: 4 (lower is better)
Translates to: QERWPEEQGTHLSPSSPCLGSGW*LARDKT
Trigger: TGTTTTGTCCCTTGCCAGCCACCATCCCGATCCTAA...ACATGGTGAGCTGGGGCTGAGATGTGTCCCTTGTTCTTCTGGCCATCTCTCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR CCA 90 bp CCATCCAGAACCAACCCTGAGTCTGCCAAGAGAGATGGCCAGAAGAACAAGGGATTAGGATCGGGATGGTaGCTGGCAAGGGACAAAACA +
Preference number: 4 (lower is better)
Translates to: PSRTNPESAKRDGQKNKGLGSGW*LARDKT
Trigger: TGTTTTGTCCCTTGCCAGCCACCATCCCGATCCTAA...TCCCTTGTTCTTCTGGCCATCTCTCTTGGCAGACTCAGGGTTGGTTCTGGATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR CCA 90 bp CTTGGCTTGGGTCTCTGTTCCTGTTCGCACACACACTTGAAGCAATCCACTGAGACACAATGGCTATGGTaGACACAATGGGAGCCAGGG +
Preference number: 4 (lower is better)
Translates to: LGLGLCSCSHTHLKQSTETQWLW*TQWEPG
Trigger: CCCTGGCTCCCATTGTGTCCACCATAGCCATTGTGT...CTCAGTGGATTGCTTCAAGTGTGTGTGCGAACAGGAACAGAGACCCAAGCCAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000129898.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR CCA 90 bp AGAGGCAGCTTCCAACCTACCAGCTTTGTCTGCACTCTTCACCATCCAGAACCAACACAATGGCTATGGTaGACACAATGGGAGCCAGGG +
Preference number: 4 (lower is better)
Translates to: RGSFQPTSFVCTLHHPEPTQWLW*TQWEPG
Trigger: CCCTGGCTCCCATTGTGTCCACCATAGCCATTGTGT...TGGTTCTGGATGGTGAAGAGTGCAGACAAAGCTGGTAGGTTGGAAGCTGCCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR CCA 90 bp CCAAGAGAGATGGCCAGAAGAACAAGGGACACATCTCAGCCCCAGCTCACCATGTCCATCAACTCCTTGTaGGTGCCCTTTTCACAGATC +
Preference number: 4 (lower is better)
Translates to: PREMARRTRDTSQPQLTMSINSL*VPFSQI
Trigger: GATCTGTGAAAAGGGCACCCACAAGGAGTTGATGGA...CATGGTGAGCTGGGGCTGAGATGTGTCCCTTGTTCTTCTGGCCATCTCTCTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000131806.8
CDS-3UTR CCA 90 bp TCCGGAGCCCGTCCTTCCCACAATCCCAACTGTCTGCCCGCTTTGGATGTTCAATCAGGGTCTCCACCATaGCTACATTGTAAATGTGCT +
Preference number: 4 (lower is better)
Translates to: SGARPSHNPNCLPALDVQSGSPP*LHCKCA
Trigger: AGCACATTTACAATGTAGCCATGGTGGAGACCCTGA...TTGAACATCCAAAGCGGGCAGACAGTTGGGATTGTGGGAAGGACGGGCTCCGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000129898.8
ENSMUST00000131806.8
CDS-3UTR CCA 90 bp AGAAGAACAAGGGACACATCTCAGCCCCAGCTCACCATGTGCTCCATGGGTGGGTCAGGGTCTCCACCATaGCTACATTGTAAATGTGCT +
Preference number: 4 (lower is better)
Translates to: RRTRDTSQPQLTMCSMGGSGSPP*LHCKCA
Trigger: AGCACATTTACAATGTAGCCATGGTGGAGACCCTGA...CCCACCCATGGAGCACATGGTGAGCTGGGGCTGAGATGTGTCCCTTGTTCTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000131806.8
CDS-3UTR CCA 90 bp CACTCTTCACCATCCAGAACCAACCCTGAGTCTGCCAAGAGAGATGGCCAGAAGGTCACGATTCCTTCTTaGGGGGATTCAGTCTGGATG +
Preference number: 4 (lower is better)
Translates to: HSSPSRTNPESAKRDGQKVTIPS*GDSVWM
Trigger: CATCCAGACTGAATCCCCCCAAGAAGGAATCGTGAC...CTTCTGGCCATCTCTCTTGGCAGACTCAGGGTTGGTTCTGGATGGTGAAGAGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000156066.8
CDS-3UTR CCA 90 bp TTGGTGAGGACACGTGAGGGACCCTTGGGGTTTTCAGAAGTGAGAGGCAGCTTCACCAACTGGTACATGTaGTGTTTGGTGTCTTGCAGG +
Preference number: 4 (lower is better)
Translates to: LVRTREGPLGFSEVRGSFTNWYM*CLVSCR
Trigger: CCTGCAAGACACCAAACACCACATGTACCAGTTGGT...GAAGCTGCCTCTCACTTCTGAAAACCCCAAGGGTCCCTCACGTGTCCTCACCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000156066.8
CDS-3UTR CCA 90 bp GTATTGGTGAGGACACGTGAGGGACCCTTGGGGTTTTCAGAAGTGAGAGGCAGCTTGAAGTACAGGAGGTaGCTGGAGTTTTCGTCGTTG +
Preference number: 4 (lower is better)
Translates to: VLVRTREGPLGFSEVRGSLKYRR*LEFSSL
Trigger: CAACGACGAAAACTCCAGCCACCTCCTGTACTTCAA...GCTGCCTCTCACTTCTGAAAACCCCAAGGGTCCCTCACGTGTCCTCACCAATAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000156066.8
CDS-3UTR CCA 90 bp CAGCTTTGTCTGCACTCTTCACCATCCAGAACCAACCCTGAGTCTGCCAAGAGAGATGGTACCAGAGGCTaGTTCCACCAGACGAAACAG +
Preference number: 4 (lower is better)
Translates to: QLCLHSSPSRTNPESAKRDGTRG*FHQTKQ
Trigger: CTGTTTCGTCTGGTGGAACCAGCCTCTGGTACCATC...TCTCTTGGCAGACTCAGGGTTGGTTCTGGATGGTGAAGAGTGCAGACAAAGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000156066.8
CDS-3UTR CCA 90 bp ACTCTTCACCATCCAGAACCAACCCTGAGTCTGCCAAGAGAGATGGCCAGAAGAAACAGGACAGGATCCTaGGGGATCATGGTCAGCTTG +
Preference number: 4 (lower is better)
Translates to: TLHHPEPTLSLPREMARRNRTGS*GIMVSL
Trigger: CAAGCTGACCATGATCCCCCAGGATCCTGTCCTGTT...TCTTCTGGCCATCTCTCTTGGCAGACTCAGGGTTGGTTCTGGATGGTGAAGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000156066.8
CDS-3UTR CCA 90 bp CCAACCCTGAGTCTGCCAAGAGAGATGGCCAGAAGAACAAGGGACACATCTCAGGCCATACAAAGCAGCTaGCGTTCTCCTACTGAGAAG +
Preference number: 4 (lower is better)
Translates to: PTLSLPREMARRTRDTSQAIQSS*RSPTEK
Trigger: CTTCTCAGTAGGAGAACGCCAGCTGCTTTGTATGGC...CTGAGATGTGTCCCTTGTTCTTCTGGCCATCTCTCTTGGCAGACTCAGGGTTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
CDS-3UTR TCA 90 bp TGCAGACAGGGGATGCCTAGCATGTACTCCCAGGTACACAGCCAAGGGAAAAGAGGAATCTCTTGGCGTTaGTGTCCGATGAGTCATAAG +
Preference number: 4 (lower is better)
Translates to: CRQGMPSMYSQVHSQGKRGISWR*CPMSHK
Trigger: CTTATGACTCATCGGACATCAACGCCAAGAGATTCC...TCTTTTCCCTTGGCTGTGTACCTGGGAGTACATGCTAGGCATCCCCTGTCTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000152438.2
CDS-3UTR TCA 90 bp TTGGCAACTGTATCTGGGAATGTTCTCAGAAAGAACCCAGTAGAGGGTTTAGACGCCCCAAGGCTGCCATaGCGATGCACAGGATGTTGG +
Preference number: 4 (lower is better)
Translates to: LATVSGNVLRKNPVEGLDAPRLP*RCTGCW
Trigger: CCAACATCCTGTGCATCGTCATGGCAGCCTTGGGGC...GTCTAAACCCTCTACTGGGTTCTTTCTGAGAACATTCCCAGATACAGTTGCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000152438.2
CDS-3UTR TCA 90 bp GACAATGTTCATGAGAATGTCCATTCTGAGAGCAAACCACCTGAGCGCGCAGTTGGAGGATTTGGTGAATaGGAACTGTCGGCCCCAAGG +
Preference number: 4 (lower is better)
Translates to: DNVHENVHSESKPPERAVGGFGE*ELSAPR
Trigger: CCTTGGGGCCGACAGTTCTCATTCACCAAATCCTCC...AACTGCGCGCTCAGGTGGTTTGCTCTCAGAATGGACATTCTCATGAACATTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000129898.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR TCA 90 bp AGGAGAGGATGCTGCCCTCATTTAGAGTGGGTTTTCCTTGTTGGCAACTGTATCGGAGGATTTGGTGAATaGGAACTGTCGGCCCCAAGG +
Preference number: 4 (lower is better)
Translates to: RRGCCPHLEWVFLVGNCIGGFGE*ELSAPR
Trigger: CCTTGGGGCCGACAGTTCTCATTCACCAAATCCTCC...GATACAGTTGCCAACAAGGAAAACCCACTCTAAATGAGGGCAGCATCCTCTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000152438.2
CDS-3UTR TCA 90 bp CCAACCCTGAGTCTGCCAAGAGAGATGGCCAGAAGAACAAGGGACACATCTCAGTCGCCTGCAGAGATGTaGGTTAACGTCTTAAAGGAC +
Preference number: 4 (lower is better)
Translates to: PTLSLPREMARRTRDTSQSPAEM*VNVLKD
Trigger: GTCCTTTAAGACGTTAACTCACATCTCTGCAGGCGA...CTGAGATGTGTCCCTTGTTCTTCTGGCCATCTCTCTTGGCAGACTCAGGGTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR TCA 90 bp CCTTTGGATGAGGCGCTGATTGAAGAAAAACTAAGGGTCACCAGCAAGGCCACACTTCGGCCACTGCTTTaGCCGAGAAAGGCAAGATTG +
Preference number: 4 (lower is better)
Translates to: PLDEALIEEKLRVTSKATLRPLL*PRKARL
Trigger: CAATCTTGCCTTTCTCGGTCAAAGCAGTGGCCGAAG...TGTGGCCTTGCTGGTGACCCTTAGTTTTTCTTCAATCAGCGCCTCATCCAAAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000129898.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR TCA 90 bp TCTTCACCATCCAGAACCAACCCTGAGTCTGCCAAGAGAGATGGCCAGAAGAACGGTCTTCAGGTTGAGTaGTGTAGGATGGGGGACTTT +
Preference number: 4 (lower is better)
Translates to: SSPSRTNPESAKRDGQKNGLQVE*CRMGDF
Trigger: AAAGTCCCCCATCCTACATCACTCAACCTGAAGACC...GTTCTTCTGGCCATCTCTCTTGGCAGACTCAGGGTTGGTTCTGGATGGTGAAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR TCA 90 bp CCAAGTTGTACCTACAAACAGGACAGGATCCTGGGGGATCATGGTCAGCTTGGTGGTCTTCAGGTTGAGTaGTGTAGGATGGGGGACTTT +
Preference number: 4 (lower is better)
Translates to: PSCTYKQDRILGDHGQLGGLQVE*CRMGDF
Trigger: AAAGTCCCCCATCCTACATCACTCAACCTGAAGACC...ACCAAGCTGACCATGATCCCCCAGGATCCTGTCCTGTTTGTAGGTACAACTTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000129898.8
CDS-3UTR TCA 90 bp CTTGGCTTGGGTCTCTGTTCCTGTTCGCACACACACTTGAAGCAATCCACTGAGGGTCTTCAGGTTGAGTaGTGTAGGATGGGGGACTTT +
Preference number: 4 (lower is better)
Translates to: LGLGLCSCSHTHLKQSTEGLQVE*CRMGDF
Trigger: AAAGTCCCCCATCCTACATCACTCAACCTGAAGACC...CTCAGTGGATTGCTTCAAGTGTGTGTGCGAACAGGAACAGAGACCCAAGCCAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000129898.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR TCA 90 bp ATGGCCAGAAGAACAAGGGACACATCTCAGCCCCAGCTCACCATGTGCTCCATGCTGGCCTCTGTTTCTTaGAAACGTGCCTTTTCTGAA +
Preference number: 4 (lower is better)
Translates to: MARRTRDTSQPQLTMCSMLASVS*KRAFSE
Trigger: TTCAGAAAAGGCACGTTTTCAAGAAACAGAGGCCAG...CATGGAGCACATGGTGAGCTGGGGCTGAGATGTGTCCCTTGTTCTTCTGGCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR TCA 90 bp GTTGCAGGCTGTCTTATTGTTCTGGGATGCACAGACGACCTGGGAACCCCTGTCCTGGCCTCTGTTTCTTaGAAACGTGCCTTTTCTGAA +
Preference number: 4 (lower is better)
Translates to: VAGCLIVLGCTDDLGTPVLASVS*KRAFSE
Trigger: TTCAGAAAAGGCACGTTTTCAAGAAACAGAGGCCAG...GACAGGGGTTCCCAGGTCGTCTGTGCATCCCAGAACAATAAGACAGCCTGCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000129898.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR TCA 90 bp GCCAGAAGAACAAGGGACACATCTCAGCCCCAGCTCACCATGTGCTCCATGGGTTTCTCACCACAAAACTaGTGTTGTGTAGCACTGACT +
Preference number: 4 (lower is better)
Translates to: ARRTRDTSQPQLTMCSMGFSPQN*CCVALT
Trigger: AGTCAGTGCTACACAACATCAGTTTTGTGGTGAGAA...ACCCATGGAGCACATGGTGAGCTGGGGCTGAGATGTGTCCCTTGTTCTTCTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR TCA 90 bp GATGATTTTCCGGAGCCCGTCCTTCCCACAATCCCAACTGTCTGCCCGCTTTGGTTCTCACCACAAAACTaGTGTTGTGTAGCACTGACT +
Preference number: 4 (lower is better)
Translates to: DDFPEPVLPTIPTVCPLWFSPQN*CCVALT
Trigger: AGTCAGTGCTACACAACATCAGTTTTGTGGTGAGAA...CCAAAGCGGGCAGACAGTTGGGATTGTGGGAAGGACGGGCTCCGGAAAATCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000129898.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR TCA 90 bp AGAAGAACAAGGGACACATCTCAGCCCCAGCTCACCATGTGCTCCATGGGTGGGCATCTTCTAACAGAATaGCCTCATCACAAGACTCCA +
Preference number: 4 (lower is better)
Translates to: RRTRDTSQPQLTMCSMGGHLLTE*PHHKTP
Trigger: TGGAGTCTTGTGATGAGGTCATTCTGTTAGAAGATG...CCCACCCATGGAGCACATGGTGAGCTGGGGCTGAGATGTGTCCCTTGTTCTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000131806.8
CDS-3UTR TCA 90 bp TTGGTGAGGACACGTGAGGGACCCTTGGGGTTTTCAGAAGTGAGAGGCAGCTTCGCCTTGATATACGTGTaGTATGTTTTCCAGGTCACG +
Preference number: 4 (lower is better)
Translates to: LVRTREGPLGFSEVRGSFALIYV*YVFQVT
Trigger: CGTGACCTGGAAAACATATCACACGTATATCAAGGC...GAAGCTGCCTCTCACTTCTGAAAACCCCAAGGGTCCCTCACGTGTCCTCACCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000156066.8
CDS-3UTR TCA 90 bp TGCCAAGAGAGATGGCCAGAAGAACAAGGGACACATCTCAGCCCCAGCTCACCAGCCTTGATATACGTGTaGTATGTTTTCCAGGTCACG +
Preference number: 4 (lower is better)
Translates to: CQERWPEEQGTHLSPSSPALIYV*YVFQVT
Trigger: CGTGACCTGGAAAACATATCACACGTATATCAAGGC...TGGTGAGCTGGGGCTGAGATGTGTCCCTTGTTCTTCTGGCCATCTCTCTTGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000156066.8
CDS-3UTR TCA 90 bp GCCAGAAGAACAAGGGACACATCTCAGCCCCAGCTCACCATGTGCTCCATGGGTACCCTCCAGAAGCCTTaGTATACGTGTGATATGTTT +
Preference number: 4 (lower is better)
Translates to: ARRTRDTSQPQLTMCSMGTLQKP*YTCDMF
Trigger: AAACATATCACACGTATATCAAGGCTTCTGGAGGGT...ACCCATGGAGCACATGGTGAGCTGGGGCTGAGATGTGTCCCTTGTTCTTCTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000156066.8
CDS-3UTR TCA 90 bp ATCCAGGAACGCTGTCATCTCCAGCCTTGGGCATTTTCCCATCTCATTTGCTTTGACAGGTCCCCACTTTaGAGGGGTGAGTGTGTTCAG +
Preference number: 4 (lower is better)
Translates to: IQERCHLQPWAFSHLICFDRSPL*RGECVQ
Trigger: CTGAACACACTCACCCCTTCAAAGTGGGGACCTGTC...AAAGCAAATGAGATGGGAAAATGCCCAAGGCTGGAGATGACAGCGTTCCTGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000156066.8
CDS-3UTR GCA 90 bp GGCAACTGTATCTGGGAATGTTCTCAGAAAGAACCCAGTAGAGGGTTTAGACCTTGTCGGCCCCAAGGCTaGCATGACGATGCACAGGAT +
Preference number: 4 (lower is better)
Translates to: GNCIWECSQKEPSRGFRPCRPQG*HDDAQD
Trigger: ATCCTGTGCATCGTCATGGCAGCCTTGGGGCCGACA...AGGTCTAAACCCTCTACTGGGTTCTTTCTGAGAACATTCCCAGATACAGTTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000152438.2
CDS-3UTR GCA 90 bp ACCAGCTTTGTCTGCACTCTTCACCATCCAGAACCAACCCTGAGTCTGCCAAGAGGCAATCACACTAAATaGCACAGGGGCAGTGAGCTT +
Preference number: 4 (lower is better)
Translates to: TSFVCTLHHPEPTLSLPRGNHTK*HRGSEL
Trigger: AAGCTCACTGCCCCTGTGGCATTTAGTGTGATTGCC...TCTTGGCAGACTCAGGGTTGGTTCTGGATGGTGAAGAGTGCAGACAAAGCTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR GCA 90 bp GAACAAGGGACACATCTCAGCCCCAGCTCACCATGTGCTCCATGGGTGGGAGGGCGAGAAAGGCAAGATTaGAATGGAAAACTTCATTAC +
Preference number: 4 (lower is better)
Translates to: EQGTHLSPSSPCAPWVGGRERQD*NGKLHY
Trigger: GTAATGAAGTTTTCCATTGCAATCTTGCCTTTCTCG...CCCTCCCACCCATGGAGCACATGGTGAGCTGGGGCTGAGATGTGTCCCTTGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR GCA 90 bp GCAGACAGGGGATGCCTAGCATGTACTCCCAGGTACACAGCCAAGGGAAAAGATTCCATGGAAGATCCATaGTTGCTGGGAAACGTAAGC +
Preference number: 4 (lower is better)
Translates to: ADRGCLACTPRYTAKGKDSMEDP*LLGNVS
Trigger: GCTTACGTTTCCCAGCAAGCATGGATCTTCCATGGA...ATCTTTTCCCTTGGCTGTGTACCTGGGAGTACATGCTAGGCATCCCCTGTCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000152438.2
CDS-3UTR GCA 90 bp AGAACAAGGGACACATCTCAGCCCCAGCTCACCATGTGCTCCATGGGTGGGAGGTCAACACAGACACCATaGTTGCTATGTAAACCAACT +
Preference number: 4 (lower is better)
Translates to: RTRDTSQPQLTMCSMGGRSTQTP*LLCKPT
Trigger: AGTTGGTTTACATAGCAAGCATGGTGTCTGTGTTGA...CCTCCCACCCATGGAGCACATGGTGAGCTGGGGCTGAGATGTGTCCCTTGTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000156066.8
CDS-3UTR GCA 90 bp CCAACCCTGAGTCTGCCAAGAGAGATGGCCAGAAGAACAAGGGACACATCTCAGACAATCCCAACTGTCTaGCCGCTTTGGATGTTCAAG +
Preference number: 4 (lower is better)
Translates to: PTLSLPREMARRTRDTSQTIPTV*PLWMFK
Trigger: CTTGAACATCCAAAGCGGGCAGACAGTTGGGATTGT...CTGAGATGTGTCCCTTGTTCTTCTGGCCATCTCTCTTGGCAGACTCAGGGTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000156066.8
CDS-3UTR GCA 90 bp CTTCCAACCTACCAGCTTTGTCTGCACTCTTCACCATCCAGAACCAACCCTGAGAGGCCTCCTTTATGGTaGTCTGAACAAGGGTGTCTG +
Preference number: 4 (lower is better)
Translates to: LPTYQLCLHSSPSRTNPERPPLW*SEQGCL
Trigger: CAGACACCCTTGTTCAGAGCACCATAAAGGAGGCCT...CTCAGGGTTGGTTCTGGATGGTGAAGAGTGCAGACAAAGCTGGTAGGTTGGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
CDS-3UTR CCA 90 bp CGGGCTTCTCAGCGAGGACTTCAGGCTTGTCAAACTCAATCACCTTCCCATTTTGTCGCACTGGGATCATaGTTTTCAGGCTGGGGTCAT +
Preference number: 4 (lower is better)
Translates to: RASQRGLQACQTQSPSHFVALGS*FSGWGH
Trigger: ATGACCCCAGCCTGAAAACCATGATCCCAGTGCGAC...AAAATGGGAAGGTGATTGAGTTTGACAAGCCTGAAGTCCTCGCTGAGAAGCCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000129898.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR CCA 90 bp TTCCAACCTACCAGCTTTGTCTGCACTCTTCACCATCCAGAACCAACCCTGAGTGTCGCACTGGGATCATaGTTTTCAGGCTGGGGTCAT +
Preference number: 4 (lower is better)
Translates to: FQPTSFVCTLHHPEPTLSVALGS*FSGWGH
Trigger: ATGACCCCAGCCTGAAAACCATGATCCCAGTGCGAC...ACTCAGGGTTGGTTCTGGATGGTGAAGAGTGCAGACAAAGCTGGTAGGTTGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR CCA 90 bp CAACTCAGGAGAGGATGCTGCCCTCATTTAGAGTGGGTTTTCCTTGTTGGCAACGTCGCACTGGGATCATaGTTTTCAGGCTGGGGTCAT +
Preference number: 4 (lower is better)
Translates to: QLRRGCCPHLEWVFLVGNVALGS*FSGWGH
Trigger: ATGACCCCAGCCTGAAAACCATGATCCCAGTGCGAC...GTTGCCAACAAGGAAAACCCACTCTAAATGAGGGCAGCATCCTCTCCTGAGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000152438.2
CDS-3UTR CCA 90 bp AGAGAGATGGCCAGAAGAACAAGGGACACATCTCAGCCCCAGCTCACCATGTGCTCTTCCCAAAGGATCTaGAATCTCTTGGCGTTGATG +
Preference number: 4 (lower is better)
Translates to: REMARRTRDTSQPQLTMCSSQRI*NLLALM
Trigger: CATCAACGCCAAGAGATTCCAGATCCTTTGGGAAGA...GCACATGGTGAGCTGGGGCTGAGATGTGTCCCTTGTTCTTCTGGCCATCTCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR CCA 90 bp TTTCCCCACTTTTATTTCATCTGGGTCCCAACTCAGGAGAGGATGCTGCCCTCACTGTGCGGTAATTTATaGCCCAGGCAAGGGCCCAAA +
Preference number: 4 (lower is better)
Translates to: FPHFYFIWVPTQERMLPSLCGNL*PRQGPK
Trigger: TTTGGGCCCTTGCCTGGGCCATAAATTACCGCACAG...TGAGGGCAGCATCCTCTCCTGAGTTGGGACCCAGATGAAATAAAAGTGGGGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000152438.2
CDS-3UTR CCA 90 bp CAACCTACCAGCTTTGTCTGCACTCTTCACCATCCAGAACCAACCCTGAGTCTGTTTCGAAGATTAGCGTaGAGAGGGCCACCTTCAGTC +
Preference number: 4 (lower is better)
Translates to: QPTSFVCTLHHPEPTLSLFRRLA*RGPPSV
Trigger: GACTGAAGGTGGCCCTCTCCACGCTAATCTTCGAAA...CAGACTCAGGGTTGGTTCTGGATGGTGAAGAGTGCAGACAAAGCTGGTAGGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR CCA 90 bp AACCTGGTCAAGTTGACAGTTGGCATTACCCTGTGTGAGCACACTCTACAACACGATCGGGATGGTGGCTaGCAAGGGACAAAACAAGGC +
Preference number: 4 (lower is better)
Translates to: NLVKLTVGITLCEHTLQHDRDGG*QGTKQG
Trigger: GCCTTGTTTTGTCCCTTGCCAGCCACCATCCCGATC...GTGTTGTAGAGTGTGCTCACACAGGGTAATGCCAACTGTCAACTTGACCAGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000152438.2
CDS-3UTR CCA 90 bp CAGCTTCCAACCTACCAGCTTTGTCTGCACTCTTCACCATCCAGAACCAACCCTTTAGGATCGGGATGGTaGCTGGCAAGGGACAAAACA +
Preference number: 4 (lower is better)
Translates to: QLPTYQLCLHSSPSRTNPLGSGW*LARDKT
Trigger: TGTTTTGTCCCTTGCCAGCCACCATCCCGATCCTAA...AGGGTTGGTTCTGGATGGTGAAGAGTGCAGACAAAGCTGGTAGGTTGGAAGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR CCA 90 bp AATCCCAACTGTCTGCCCGCTTTGGATGTTCAAGTTCAGGCCATCAAGAACGAGCCATTAGGATCGGGATaGTGGCTGGCAAGGGACAAA +
Preference number: 4 (lower is better)
Translates to: NPNCLPALDVQVQAIKNEPLGSG*WLARDK
Trigger: TTTGTCCCTTGCCAGCCACCATCCCGATCCTAATGG...CTCGTTCTTGATGGCCTGAACTTGAACATCCAAAGCGGGCAGACAGTTGGGATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000129898.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR CCA 90 bp TTTCCCCACTTTTATTTCATCTGGGTCCCAACTCAGGAGAGGATGCTGCCCTCACCATTAGGATCGGGATaGTGGCTGGCAAGGGACAAA +
Preference number: 4 (lower is better)
Translates to: FPHFYFIWVPTQERMLPSPLGSG*WLARDK
Trigger: TTTGTCCCTTGCCAGCCACCATCCCGATCCTAATGG...TGAGGGCAGCATCCTCTCCTGAGTTGGGACCCAGATGAAATAAAAGTGGGGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000152438.2
CDS-3UTR CCA 90 bp TATTTCATCTGGGTCCCAACTCAGGAGAGGATGCTGCCCTCATTTAGAGTGGGTCTATGGTGGACACAATaGGAGCCAGGGCTGAGTTTC +
Preference number: 4 (lower is better)
Translates to: YFIWVPTQERMLPSFRVGLWWTQ*EPGLSF
Trigger: GAAACTCAGCCCTGGCTCCCATTGTGTCCACCATAG...ACCCACTCTAAATGAGGGCAGCATCCTCTCCTGAGTTGGGACCCAGATGAAATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000152438.2
CDS-3UTR CCA 90 bp TATTTCATCTGGGTCCCAACTCAGGAGAGGATGCTGCCCTCATTTAGAGTGGGTACACAATGGCTATGGTaGACACAATGGGAGCCAGGG +
Preference number: 4 (lower is better)
Translates to: YFIWVPTQERMLPSFRVGTQWLW*TQWEPG
Trigger: CCCTGGCTCCCATTGTGTCCACCATAGCCATTGTGT...ACCCACTCTAAATGAGGGCAGCATCCTCTCCTGAGTTGGGACCCAGATGAAATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000152438.2
CDS-3UTR CCA 90 bp TATTTCATCTGGGTCCCAACTCAGGAGAGGATGCTGCCCTCATTTAGAGTGGGTTGTGTAGCACTGACTTaGGGCTGCCACTTTGCCACT +
Preference number: 4 (lower is better)
Translates to: YFIWVPTQERMLPSFRVGCVALT*GCHFAT
Trigger: AGTGGCAAAGTGGCAGCCCCAAGTCAGTGCTACACA...ACCCACTCTAAATGAGGGCAGCATCCTCTCCTGAGTTGGGACCCAGATGAAATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000152438.2
CDS-3UTR CCA 90 bp GATTCATTACTGAGCCAAGGGAGATGGCTGTGGGAGGTCATGTGCTCCATGGGTTCCCTCACATTTCCATaGAAGATCCATGCTTGCTGG +
Preference number: 4 (lower is better)
Translates to: DSLLSQGRWLWEVMCSMGSLTFP*KIHACW
Trigger: CCAGCAAGCATGGATCTTCCATGGAAATGTGAGGGA...ACCCATGGAGCACATGACCTCCCACAGCCATCTCCCTTGGCTCAGTAATGAATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129898.8
CDS-3UTR CCA 90 bp GGCAGCTTCCAACCTACCAGCTTTGTCTGCACTCTTCACCATCCAGAACCAACCTCCATCAACTCCTTGTaGGTGCCCTTTTCACAGATC +
Preference number: 4 (lower is better)
Translates to: GSFQPTSFVCTLHHPEPTSINSL*VPFSQI
Trigger: GATCTGTGAAAAGGGCACCCACAAGGAGTTGATGGA...GGTTGGTTCTGGATGGTGAAGAGTGCAGACAAAGCTGGTAGGTTGGAAGCTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000131806.8
CDS-3UTR CCA 90 bp ATGGCCAGAAGAACAAGGGACACATCTCAGCCCCAGCTCACCATGTGCTCCATGTCAGGGTCTCCACCATaGCTACATTGTAAATGTGCT +
Preference number: 4 (lower is better)
Translates to: MARRTRDTSQPQLTMCSMSGSPP*LHCKCA
Trigger: AGCACATTTACAATGTAGCCATGGTGGAGACCCTGA...CATGGAGCACATGGTGAGCTGGGGCTGAGATGTGTCCCTTGTTCTTCTGGCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000131806.8
CDS-3UTR CCA 90 bp GTCCATTCTGAGAGCAAACCACCTGAGCGCGCAGTTGAAGTACAGGAGGTGGCTTCAGGGTCTCCACCATaGCTACATTGTAAATGTGCT +
Preference number: 4 (lower is better)
Translates to: VHSESKPPERAVEVQEVASGSPP*LHCKCA
Trigger: AGCACATTTACAATGTAGCCATGGTGGAGACCCTGA...AGCCACCTCCTGTACTTCAACTGCGCGCTCAGGTGGTTTGCTCTCAGAATGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000129898.8
ENSMUST00000131806.8
CDS-3UTR CCA 90 bp ATCATCAGGAAGAAGAGACACAAAACCAGGAAGGAGACCAGGTACCCTCCAGAATTCATCCCTCTGAGCTaGGCTCTCCTTCAGGGTCTC +
Preference number: 4 (lower is better)
Translates to: IIRKKRHKTRKETRYPPEFIPLS*ALLQGL
Trigger: GAGACCCTGAAGGAGAGCCCAGCTCAGAGGGATGAA...TTCTGGAGGGTACCTGGTCTCCTTCCTGGTTTTGTGTCTCTTCTTCCTGATGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000129898.8
ENSMUST00000131806.8
CDS-3UTR CCA 90 bp AGAGGCAGCTTCCAACCTACCAGCTTTGTCTGCACTCTTCACCATCCAGAACCAGGTACATGTGGTGTTTaGTGTCTTGCAGGGTCTGGT +
Preference number: 4 (lower is better)
Translates to: RGSFQPTSFVCTLHHPEPGTCGV*CLAGSG
Trigger: ACCAGACCCTGCAAGACACCAAACACCACATGTACC...TGGTTCTGGATGGTGAAGAGTGCAGACAAAGCTGGTAGGTTGGAAGCTGCCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000156066.8
CDS-3UTR CCA 90 bp TTCCAACCTACCAGCTTTGTCTGCACTCTTCACCATCCAGAACCAACCCTGAGTAACAGGACAGGATCCTaGGGGATCATGGTCAGCTTG +
Preference number: 4 (lower is better)
Translates to: FQPTSFVCTLHHPEPTLSNRTGS*GIMVSL
Trigger: CAAGCTGACCATGATCCCCCAGGATCCTGTCCTGTT...ACTCAGGGTTGGTTCTGGATGGTGAAGAGTGCAGACAAAGCTGGTAGGTTGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000156066.8
3UTR CAA 72 bp AAAATGTACTCCCTCAGTAGCTCTGCGGAGGTGAACTaGGCTTGGGTCTCTGTTCCTGTTCGCACACACACT +
Preference number: 4 (lower is better)
Translates to: KMYSLSSSAEVN*AWVSVPVRTHT
Trigger: AGTGTGTGTGCGAACAGGAACAGAGACCCAAGCCAAGTTCACCTCCGCAGAGCTACTGAGGGAGTACATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000129898.8
ENSMUST00000131806.8
ENSMUST00000156610.8
3UTR CAA 72 bp TCTGATACTTCAAAGGTCAGTCCCTCCCTGGCTCCGTaGAATTCTTTCAAGTGGGCTGAATCCCTGGGCGTT +
Preference number: 4 (lower is better)
Translates to: SDTSKVSPSLAP*NSFKWAESLGV
Trigger: AACGCCCAGGGATTCAGCCCACTTGAAAGAATTCAACGGAGCCAGGGAGGGACTGACCTTTGAAGTATCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129898.8
CDS-3UTR TCA 90 bp TCTTCACCATCCAGAACCAACCCTGAGTCTGCCAAGAGAGATGGCCAGAAGAACGGAATCTCTTGGCGTTaGTGTCCGATGAGTCATAAG +
Preference number: 4 (lower is better)
Translates to: SSPSRTNPESAKRDGQKNGISWR*CPMSHK
Trigger: CTTATGACTCATCGGACATCAACGCCAAGAGATTCC...GTTCTTCTGGCCATCTCTCTTGGCAGACTCAGGGTTGGTTCTGGATGGTGAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR TCA 90 bp TTGGTGAGGACACGTGAGGGACCCTTGGGGTTTTCAGAAGTGAGAGGCAGCTTCAACTCATTCATTGTCTaGACCCGTTTGTCTGTCACT +
Preference number: 4 (lower is better)
Translates to: LVRTREGPLGFSEVRGSFNSFIV*TRLSVT
Trigger: AGTGACAGACAAACGGGTTCAGACAATGAATGAGTT...GAAGCTGCCTCTCACTTCTGAAAACCCCAAGGGTCCCTCACGTGTCCTCACCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR TCA 90 bp GTATTGGTGAGGACACGTGAGGGACCCTTGGGGTTTTCAGAAGTGAGAGGCAGCTTCTCACCACAAAACTaGTGTTGTGTAGCACTGACT +
Preference number: 4 (lower is better)
Translates to: VLVRTREGPLGFSEVRGSFSPQN*CCVALT
Trigger: AGTCAGTGCTACACAACATCAGTTTTGTGGTGAGAA...GCTGCCTCTCACTTCTGAAAACCCCAAGGGTCCCTCACGTGTCCTCACCAATAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR TCA 90 bp AACAAAATCCAGGAACGCTGTCATCTCCAGCCTTGGGCATTTTCCCATCTCATTTGTGCTCTGGATCCTTaGATTGCAGTCCCCGGAGGT +
Preference number: 4 (lower is better)
Translates to: NKIQERCHLQPWAFSHLICALDP*IAVPGG
Trigger: ACCTCCGGGGACTGCAATTCAAGGATCCAGAGCACA...AATGAGATGGGAAAATGCCCAAGGCTGGAGATGACAGCGTTCCTGGATTTTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000131423.8
CDS-3UTR TCA 90 bp CACAGGACCTTTACAGTCCAACCTCTGCAGCTAGTAACATCGCAAATGCAGAGTACCTGCTTGAGCTCCTaGACTCCTCGATGGAAGATG +
Preference number: 4 (lower is better)
Translates to: HRTFTVQPLQLVTSQMQSTCLSS*TPRWKM
Trigger: CATCTTCCATCGAGGAGTTCAGGAGCTCAAGCAGGT...ACTCTGCATTTGCGATGTTACTAGCTGCAGAGGTTGGACTGTAAAGGTCCTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156066.8
CDS-3UTR TCA 90 bp AACAAAATCCAGGAACGCTGTCATCTCCAGCCTTGGGCATTTTCCCATCTCATTGTGAGAGAACCAAGGTaGCCGGCTGATGTTCTCCAC +
Preference number: 4 (lower is better)
Translates to: NKIQERCHLQPWAFSHLIVREPR*PADVLH
Trigger: GTGGAGAACATCAGCCGGTCACCTTGGTTCTCTCAC...AATGAGATGGGAAAATGCCCAAGGCTGGAGATGACAGCGTTCCTGGATTTTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000131423.8
ENSMUST00000156066.8
CDS-3UTR TCA 90 bp AATGTTCCCATTCTCAGACATTATGTAGTATTGGTGAGGACACGTGAGGGACCCGACAGGTCCCCACTTTaGAGGGGTGAGTGTGTTCAG +
Preference number: 4 (lower is better)
Translates to: NVPILRHYVVLVRTREGPDRSPL*RGECVQ
Trigger: CTGAACACACTCACCCCTTCAAAGTGGGGACCTGTC...GGGTCCCTCACGTGTCCTCACCAATACTACATAATGTCTGAGAATGGGAACATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000156066.8
CDS-3UTR GCA 90 bp GGCCAGAAGAACAAGGGACACATCTCAGCCCCAGCTCACCATGTGCTCCATGGGCGAGAAAGGCAAGATTaGAATGGAAAACTTCATTAC +
Preference number: 4 (lower is better)
Translates to: GQKNKGHISAPAHHVLHGRERQD*NGKLHY
Trigger: GTAATGAAGTTTTCCATTGCAATCTTGCCTTTCTCG...CCCATGGAGCACATGGTGAGCTGGGGCTGAGATGTGTCCCTTGTTCTTCTGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR GCA 90 bp ACCAGCTTTGTCTGCACTCTTCACCATCCAGAACCAACCCTGAGTCTGCCAAGAACCCCTTTCTGTAACTaGATCTGTCCTAGGAGAGCT +
Preference number: 4 (lower is better)
Translates to: TSFVCTLHHPEPTLSLPRTPFCN*ICPRRA
Trigger: AGCTCTCCTAGGACAGATGCAGTTACAGAAAGGGGT...TCTTGGCAGACTCAGGGTTGGTTCTGGATGGTGAAGAGTGCAGACAAAGCTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR GCA 90 bp CCCATTCTCAGACATTATGTAGTATTGGTGAGGACACGTGAGGGACCCTTGGGGACCCCTTTCTGTAACTaGATCTGTCCTAGGAGAGCT +
Preference number: 4 (lower is better)
Translates to: PILRHYVVLVRTREGPLGTPFCN*ICPRRA
Trigger: AGCTCTCCTAGGACAGATGCAGTTACAGAAAGGGGT...CCCCAAGGGTCCCTCACGTGTCCTCACCAATACTACATAATGTCTGAGAATGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR GCA 90 bp CTTCCAACCTACCAGCTTTGTCTGCACTCTTCACCATCCAGAACCAACCCTGAGGTTCTTTCCAAAACATaGCAGAGCATCTCGTCGGTG +
Preference number: 4 (lower is better)
Translates to: LPTYQLCLHSSPSRTNPEVLSKT*QSISSV
Trigger: CACCGACGAGATGCTCTGGCATGTTTTGGAAAGAAC...CTCAGGGTTGGTTCTGGATGGTGAAGAGTGCAGACAAAGCTGGTAGGTTGGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000156066.8
CDS-3UTR GCA 90 bp ACCAGCTTTGTCTGCACTCTTCACCATCCAGAACCAACCCTGAGTCTGCCAAGAGTTCTTTCCAAAACATaGCAGAGCATCTCGTCGGTG +
Preference number: 4 (lower is better)
Translates to: TSFVCTLHHPEPTLSLPRVLSKT*QSISSV
Trigger: CACCGACGAGATGCTCTGGCATGTTTTGGAAAGAAC...TCTTGGCAGACTCAGGGTTGGTTCTGGATGGTGAAGAGTGCAGACAAAGCTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000156066.8
CDS-3UTR CCA 90 bp CTCAGACATTATGTAGTATTGGTGAGGACACGTGAGGGACCCTTGGGGTTTTCAGTCGCACTGGGATCATaGTTTTCAGGCTGGGGTCAT +
Preference number: 4 (lower is better)
Translates to: LRHYVVLVRTREGPLGFSVALGS*FSGWGH
Trigger: ATGACCCCAGCCTGAAAACCATGATCCCAGTGCGAC...TGAAAACCCCAAGGGTCCCTCACGTGTCCTCACCAATACTACATAATGTCTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR CCA 90 bp CCCATTCTCAGACATTATGTAGTATTGGTGAGGACACGTGAGGGACCCTTGGGGCGATGCACAGGATGTTaGCTACAACGTCCATCAGAA +
Preference number: 4 (lower is better)
Translates to: PILRHYVVLVRTREGPLGRCTGC*LQRPSE
Trigger: TTCTGATGGACGTTGTAGCCAACATCCTGTGCATCG...CCCCAAGGGTCCCTCACGTGTCCTCACCAATACTACATAATGTCTGAGAATGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR CCA 90 bp CTCAGACATTATGTAGTATTGGTGAGGACACGTGAGGGACCCTTGGGGTTTTCACTGTGCGGTAATTTATaGCCCAGGCAAGGGCCCAAA +
Preference number: 4 (lower is better)
Translates to: LRHYVVLVRTREGPLGFSLCGNL*PRQGPK
Trigger: TTTGGGCCCTTGCCTGGGCCATAAATTACCGCACAG...TGAAAACCCCAAGGGTCCCTCACGTGTCCTCACCAATACTACATAATGTCTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR CCA 90 bp TTCCAACCTACCAGCTTTGTCTGCACTCTTCACCATCCAGAACCAACCCTGAGTTTTCGAAGATTAGCGTaGAGAGGGCCACCTTCAGTC +
Preference number: 4 (lower is better)
Translates to: FQPTSFVCTLHHPEPTLSFRRLA*RGPPSV
Trigger: GACTGAAGGTGGCCCTCTCCACGCTAATCTTCGAAA...ACTCAGGGTTGGTTCTGGATGGTGAAGAGTGCAGACAAAGCTGGTAGGTTGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR CCA 90 bp GTGGGAGTTGTGTCGAAGAAGCTCATTGGGCTCCTGACGATCTTGTTAAATACTGATCGGGATGGTGGCTaGCAAGGGACAAAACAAGGC +
Preference number: 4 (lower is better)
Translates to: VGVVSKKLIGLLTILLNTDRDGG*QGTKQG
Trigger: GCCTTGTTTTGTCCCTTGCCAGCCACCATCCCGATC...AGTATTTAACAAGATCGTCAGGAGCCCAATGAGCTTCTTCGACACAACTCCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000129898.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR CCA 90 bp GTCCATTCTGAGAGCAAACCACCTGAGCGCGCAGTTGAAGTACAGGAGGTGGCTCGTTTCAGGAAAATGTaGCAGGTGAAAGTAGACACA +
Preference number: 4 (lower is better)
Translates to: VHSESKPPERAVEVQEVARFRKM*QVKVDT
Trigger: TGTGTCTACTTTCACCTGCCACATTTTCCTGAAACG...AGCCACCTCCTGTACTTCAACTGCGCGCTCAGGTGGTTTGCTCTCAGAATGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000129898.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR CCA 90 bp ATGGCCAGAAGAACAAGGGACACATCTCAGCCCCAGCTCACCATGTGCTCCATGGTTCCCATGTCAAGGTaGCATTTGCTAAAAGCAAGA +
Preference number: 4 (lower is better)
Translates to: MARRTRDTSQPQLTMCSMVPMSR*HLLKAR
Trigger: TCTTGCTTTTAGCAAATGCCACCTTGACATGGGAAC...CATGGAGCACATGGTGAGCTGGGGCTGAGATGTGTCCCTTGTTCTTCTGGCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR CCA 90 bp AGAGGCAGCTTCCAACCTACCAGCTTTGTCTGCACTCTTCACCATCCAGAACCATCCCTCACATTTCCATaGAAGATCCATGCTTGCTGG +
Preference number: 4 (lower is better)
Translates to: RGSFQPTSFVCTLHHPEPSLTFP*KIHACW
Trigger: CCAGCAAGCATGGATCTTCCATGGAAATGTGAGGGA...TGGTTCTGGATGGTGAAGAGTGCAGACAAAGCTGGTAGGTTGGAAGCTGCCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR CCA 90 bp GAGTCTGCCAAGAGAGATGGCCAGAAGAACAAGGGACACATCTCAGCCCCAGCTGTGTGTTGGTACCTTTaGTGGTTGTATTTCTCTCCA +
Preference number: 4 (lower is better)
Translates to: ESAKRDGQKNKGHISAPAVCWYL*WLYFSP
Trigger: TGGAGAGAAATACAACCACCAAAGGTACCAACACAC...AGCTGGGGCTGAGATGTGTCCCTTGTTCTTCTGGCCATCTCTCTTGGCAGACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR CCA 90 bp CCCACAGTGCAGATGTCCACCTCGTCAATGATGATGGTACCAGAGGCTGGTTCCGTGTGTTGGTACCTTTaGTGGTTGTATTTCTCTCCA +
Preference number: 4 (lower is better)
Translates to: PTVQMSTSSMMMVPEAGSVCWYL*WLYFSP
Trigger: TGGAGAGAAATACAACCACCAAAGGTACCAACACAC...GGAACCAGCCTCTGGTACCATCATCATTGACGAGGTGGACATCTGCACTGTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000129898.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR CCA 90 bp CTGCCAAGAGAGATGGCCAGAAGAACAAGGGACACATCTCAGCCCCAGCTCACCATTGTAAATGTGCTCTaGATCCTTGAATTGCAGTCC +
Preference number: 4 (lower is better)
Translates to: LPREMARRTRDTSQPQLTIVNVL*ILELQS
Trigger: GGACTGCAATTCAAGGATCCAGAGCACATTTACAAT...GGTGAGCTGGGGCTGAGATGTGTCCCTTGTTCTTCTGGCCATCTCTCTTGGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000131806.8
CDS-3UTR CCA 90 bp ACTCTTCACCATCCAGAACCAACCCTGAGTCTGCCAAGAGAGATGGCCAGAAGAACCAACTGGTACATGTaGTGTTTGGTGTCTTGCAGG +
Preference number: 4 (lower is better)
Translates to: TLHHPEPTLSLPREMARRTNWYM*CLVSCR
Trigger: CCTGCAAGACACCAAACACCACATGTACCAGTTGGT...TCTTCTGGCCATCTCTCTTGGCAGACTCAGGGTTGGTTCTGGATGGTGAAGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000156066.8
CDS-3UTR CCA 90 bp TGCCAAGAGAGATGGCCAGAAGAACAAGGGACACATCTCAGCCCCAGCTCACCATTAAATACTCTGTTGTaGAGAGAGGAAGACGCCATC +
Preference number: 4 (lower is better)
Translates to: CQERWPEEQGTHLSPSSPLNTLL*REEDAI
Trigger: GATGGCGTCTTCCTCTCTCCACAACAGAGTATTTAA...TGGTGAGCTGGGGCTGAGATGTGTCCCTTGTTCTTCTGGCCATCTCTCTTGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000156066.8
CDS-3UTR CCA 90 bp ACCAGCTTTGTCTGCACTCTTCACCATCCAGAACCAACCCTGAGTCTGCCAAGATTGAAGTACAGGAGGTaGCTGGAGTTTTCGTCGTTG +
Preference number: 4 (lower is better)
Translates to: TSFVCTLHHPEPTLSLPRLKYRR*LEFSSL
Trigger: CAACGACGAAAACTCCAGCCACCTCCTGTACTTCAA...TCTTGGCAGACTCAGGGTTGGTTCTGGATGGTGAAGAGTGCAGACAAAGCTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000156066.8
CDS-3UTR TCA 90 bp CAACTCAGGAGAGGATGCTGCCCTCATTTAGAGTGGGTTTTCCTTGTTGGCAACTCGCCTGCAGAGATGTaGGTTAACGTCTTAAAGGAC +
Preference number: 4 (lower is better)
Translates to: QLRRGCCPHLEWVFLVGNSPAEM*VNVLKD
Trigger: GTCCTTTAAGACGTTAACTCACATCTCTGCAGGCGA...GTTGCCAACAAGGAAAACCCACTCTAAATGAGGGCAGCATCCTCTCCTGAGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000152438.2
CDS-3UTR TCA 90 bp AATCACCCACAGGACCTTTACAGTCCAACCTCTGCAGCTAGTAACATCGCAAATCTGTGGACCCCAGAATaGAAAAGGCGTACACTGCAC +
Preference number: 4 (lower is better)
Translates to: NHPQDLYSPTSAASNIANLWTPE*KRRTLH
Trigger: GTGCAGTGTACGCCTTTTTCATTCTGGGGTCCACAG...ATTTGCGATGTTACTAGCTGCAGAGGTTGGACTGTAAAGGTCCTGTGGGTGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000129898.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR TCA 90 bp GTTGAAGTACAGGAGGTGGCTGGAGTTTTCGTCGTTGAGTGTCTTAAACTTGCTCTGTGGACCCCAGAATaGAAAAGGCGTACACTGCAC +
Preference number: 4 (lower is better)
Translates to: VEVQEVAGVFVVECLKLALWTPE*KRRTLH
Trigger: GTGCAGTGTACGCCTTTTTCATTCTGGGGTCCACAG...AGCAAGTTTAAGACACTCAACGACGAAAACTCCAGCCACCTCCTGTACTTCAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000129898.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR TCA 90 bp CCCTCCAGAAGCCTTGATATACGTGTGATATGTTTTCCAGGTCACGATTCCTTCCTGTGGACCCCAGAATaGAAAAGGCGTACACTGCAC +
Preference number: 4 (lower is better)
Translates to: PSRSLDIRVICFPGHDSFLWTPE*KRRTLH
Trigger: GTGCAGTGTACGCCTTTTTCATTCTGGGGTCCACAG...GAAGGAATCGTGACCTGGAAAACATATCACACGTATATCAAGGCTTCTGGAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000129898.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR TCA 90 bp GTTGTACCTACAAACAGGACAGGATCCTGGGGGATCATGGTCAGCTTGGTTCGGAACTCATTCATTGTCTaGACCCGTTTGTCTGTCACT +
Preference number: 4 (lower is better)
Translates to: VVPTNRTGSWGIMVSLVRNSFIV*TRLSVT
Trigger: AGTGACAGACAAACGGGTTCAGACAATGAATGAGTT...CCGAACCAAGCTGACCATGATCCCCCAGGATCCTGTCCTGTTTGTAGGTACAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000129898.8
CDS-3UTR TCA 90 bp CTGTCTGCCCGCTTTGGATGTTCAAGTTCAGGCCATCAAGAACGAGAGGGGTGTAACTCATTCATTGTCTaGACCCGTTTGTCTGTCACT +
Preference number: 4 (lower is better)
Translates to: LSARFGCSSSGHQEREGCNSFIV*TRLSVT
Trigger: AGTGACAGACAAACGGGTTCAGACAATGAATGAGTT...ACACCCCTCTCGTTCTTGATGGCCTGAACTTGAACATCCAAAGCGGGCAGACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000129898.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR TCA 90 bp CTCAGACATTATGTAGTATTGGTGAGGACACGTGAGGGACCCTTGGGGTTTTCAAATGGGAGCCAGGGCTaGGTTTCCACTTTGGACATA +
Preference number: 4 (lower is better)
Translates to: LRHYVVLVRTREGPLGFSNGSQG*VSTLDI
Trigger: TATGTCCAAAGTGGAAACTCAGCCCTGGCTCCCATT...TGAAAACCCCAAGGGTCCCTCACGTGTCCTCACCAATACTACATAATGTCTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR TCA 90 bp GTATCTGGGAATGTTCTCAGAAAGAACCCAGTAGAGGGTTTAGACCTTCAAGGGATGCCACAGGGGCAGTaGGCTTGCGTTTCAGGAAAA +
Preference number: 4 (lower is better)
Translates to: VSGNVLRKNPVEGLDLQGMPQGQ*ACVSGK
Trigger: TTTTCCTGAAACGCAAGCTCACTGCCCCTGTGGCAT...CCCTTGAAGGTCTAAACCCTCTACTGGGTTCTTTCTGAGAACATTCCCAGATAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000152438.2
CDS-3UTR TCA 90 bp AACAAAATCCAGGAACGCTGTCATCTCCAGCCTTGGGCATTTTCCCATCTCATTCTTCGGCCACTGCTTTaGCCGAGAAAGGCAAGATTG +
Preference number: 4 (lower is better)
Translates to: NKIQERCHLQPWAFSHLILRPLL*PRKARL
Trigger: CAATCTTGCCTTTCTCGGTCAAAGCAGTGGCCGAAG...AATGAGATGGGAAAATGCCCAAGGCTGGAGATGACAGCGTTCCTGGATTTTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000131423.8
CDS-3UTR TCA 90 bp GTATCTGGGAATGTTCTCAGAAAGAACCCAGTAGAGGGTTTAGACCTTCAAGGGCTTCGGCCACTGCTTTaGCCGAGAAAGGCAAGATTG +
Preference number: 4 (lower is better)
Translates to: VSGNVLRKNPVEGLDLQGLRPLL*PRKARL
Trigger: CAATCTTGCCTTTCTCGGTCAAAGCAGTGGCCGAAG...CCCTTGAAGGTCTAAACCCTCTACTGGGTTCTTTCTGAGAACATTCCCAGATAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000152438.2
CDS-3UTR TCA 90 bp CTTGGCTTGGGTCTCTGTTCCTGTTCGCACACACACTTGAAGCAATCCACTGAGCTGGCCTCTGTTTCTTaGAAACGTGCCTTTTCTGAA +
Preference number: 4 (lower is better)
Translates to: LGLGLCSCSHTHLKQSTELASVS*KRAFSE
Trigger: TTCAGAAAAGGCACGTTTTCAAGAAACAGAGGCCAG...CTCAGTGGATTGCTTCAAGTGTGTGTGCGAACAGGAACAGAGACCCAAGCCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000129898.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR TCA 90 bp ACCAGCTTTGTCTGCACTCTTCACCATCCAGAACCAACCCTGAGTCTGCCAAGACTGGCCTCTGTTTCTTaGAAACGTGCCTTTTCTGAA +
Preference number: 4 (lower is better)
Translates to: TSFVCTLHHPEPTLSLPRLASVS*KRAFSE
Trigger: TTCAGAAAAGGCACGTTTTCAAGAAACAGAGGCCAG...TCTTGGCAGACTCAGGGTTGGTTCTGGATGGTGAAGAGTGCAGACAAAGCTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR TCA 90 bp GGCAGCTTCCAACCTACCAGCTTTGTCTGCACTCTTCACCATCCAGAACCAACCCATCTTCTAACAGAATaGCCTCATCACAAGACTCCA +
Preference number: 4 (lower is better)
Translates to: GSFQPTSFVCTLHHPEPTHLLTE*PHHKTP
Trigger: TGGAGTCTTGTGATGAGGTCATTCTGTTAGAAGATG...GGTTGGTTCTGGATGGTGAAGAGTGCAGACAAAGCTGGTAGGTTGGAAGCTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000131806.8
CDS-3UTR TCA 90 bp GCCAAGGGAAAAGATGGTAAATACCGTTTGTGTCCACAAATTCTTCTGTTTCAGGCGTCTTCATCCCTCTaGGCTGGGCTCTCCTTCAGG +
Preference number: 4 (lower is better)
Translates to: AKGKDGKYRLCPQILLFQASSSL*AGLSFR
Trigger: CCTGAAGGAGAGCCCAGCTCAGAGGGATGAAGACGC...CTGAAACAGAAGAATTTGTGGACACAAACGGTATTTACCATCTTTTCCCTTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000152438.2
CDS-3UTR GCA 90 bp CCCTCCAGAAGCCTTGATATACGTGTGATATGTTTTCCAGGTCACGATTCCTTCCAAGACTCCAGGAACTaGAACTGGTGGGTAACCAGC +
Preference number: 4 (lower is better)
Translates to: PSRSLDIRVICFPGHDSFQDSRN*NWWVTS
Trigger: GCTGGTTACCCACCAGTTGCAGTTCCTGGAGTCTTG...GAAGGAATCGTGACCTGGAAAACATATCACACGTATATCAAGGCTTCTGGAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000129898.8
ENSMUST00000131806.8
CDS-3UTR CCA 90 bp CAACTCAGGAGAGGATGCTGCCCTCATTTAGAGTGGGTTTTCCTTGTTGGCAACTCATGGTTTTCAGGCTaGGGTCATATCTCTCGGCAA +
Preference number: 4 (lower is better)
Translates to: QLRRGCCPHLEWVFLVGNSWFSG*GHISRQ
Trigger: TTGCCGAGAGATATGACCCCAGCCTGAAAACCATGA...GTTGCCAACAAGGAAAACCCACTCTAAATGAGGGCAGCATCCTCTCCTGAGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000152438.2
CDS-3UTR CCA 90 bp CAGCAAGGCCACAACAAAGGTGACAATGTTCATGAGAATGTCCATTCTGAGAGCGTCGCACTGGGATCATaGTTTTCAGGCTGGGGTCAT +
Preference number: 4 (lower is better)
Translates to: QQGHNKGDNVHENVHSESVALGS*FSGWGH
Trigger: ATGACCCCAGCCTGAAAACCATGATCCCAGTGCGAC...GCTCTCAGAATGGACATTCTCATGAACATTGTCACCTTTGTTGTGGCCTTGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000129898.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR CCA 90 bp GTCCCAACTCAGGAGAGGATGCTGCCCTCATTTAGAGTGGGTTTTCCTTGTTGGTCTTCCCAAAGGATCTaGAATCTCTTGGCGTTGATG +
Preference number: 4 (lower is better)
Translates to: VPTQERMLPSFRVGFPCWSSQRI*NLLALM
Trigger: CATCAACGCCAAGAGATTCCAGATCCTTTGGGAAGA...CCAACAAGGAAAACCCACTCTAAATGAGGGCAGCATCCTCTCCTGAGTTGGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000152438.2
CDS-3UTR CCA 90 bp AATCCCAACTGTCTGCCCGCTTTGGATGTTCAAGTTCAGGCCATCAAGAACGAGCGATGCACAGGATGTTaGCTACAACGTCCATCAGAA +
Preference number: 4 (lower is better)
Translates to: NPNCLPALDVQVQAIKNERCTGC*LQRPSE
Trigger: TTCTGATGGACGTTGTAGCCAACATCCTGTGCATCG...CTCGTTCTTGATGGCCTGAACTTGAACATCCAAAGCGGGCAGACAGTTGGGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000129898.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR CCA 90 bp AACCTGGTCAAGTTGACAGTTGGCATTACCCTGTGTGAGCACACTCTACAACACTTTCGAAGATTAGCGTaGAGAGGGCCACCTTCAGTC +
Preference number: 4 (lower is better)
Translates to: NLVKLTVGITLCEHTLQHFRRLA*RGPPSV
Trigger: GACTGAAGGTGGCCCTCTCCACGCTAATCTTCGAAA...GTGTTGTAGAGTGTGCTCACACAGGGTAATGCCAACTGTCAACTTGACCAGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000152438.2
CDS-3UTR CCA 90 bp TGTGTCGAAGAAGCTCATTGGGCTCCTGACGATCTTGTTAAATACTCTGTTGTGGATCGGGATGGTGGCTaGCAAGGGACAAAACAAGGC +
Preference number: 4 (lower is better)
Translates to: CVEEAHWAPDDLVKYSVVDRDGG*QGTKQG
Trigger: GCCTTGTTTTGTCCCTTGCCAGCCACCATCCCGATC...CACAACAGAGTATTTAACAAGATCGTCAGGAGCCCAATGAGCTTCTTCGACACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000129898.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR CCA 90 bp ATCATCAGGAAGAAGAGACACAAAACCAGGAAGGAGACCAGGTACCCTCCAGAATTAGGATCGGGATGGTaGCTGGCAAGGGACAAAACA +
Preference number: 4 (lower is better)
Translates to: IIRKKRHKTRKETRYPPELGSGW*LARDKT
Trigger: TGTTTTGTCCCTTGCCAGCCACCATCCCGATCCTAA...TTCTGGAGGGTACCTGGTCTCCTTCCTGGTTTTGTGTCTCTTCTTCCTGATGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000129898.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR CCA 90 bp AATCACCCACAGGACCTTTACAGTCCAACCTCTGCAGCTAGTAACATCGCAAATCTATGGTGGACACAATaGGAGCCAGGGCTGAGTTTC +
Preference number: 4 (lower is better)
Translates to: NHPQDLYSPTSAASNIANLWWTQ*EPGLSF
Trigger: GAAACTCAGCCCTGGCTCCCATTGTGTCCACCATAG...ATTTGCGATGTTACTAGCTGCAGAGGTTGGACTGTAAAGGTCCTGTGGGTGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000129898.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR CCA 90 bp ATGGCCAGAAGAACAAGGGACACATCTCAGCCCCAGCTCACCATGTGCTCCATGTGTTGGTACCTTTGGTaGTTGTATTTCTCTCCAAAC +
Preference number: 4 (lower is better)
Translates to: MARRTRDTSQPQLTMCSMCWYLW*LYFSPN
Trigger: GTTTGGAGAGAAATACAACCACCAAAGGTACCAACA...CATGGAGCACATGGTGAGCTGGGGCTGAGATGTGTCCCTTGTTCTTCTGGCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR CCA 90 bp GATCATGGTCAGCTTGGTTCGGAGGTCTTCCAGACCCACAGTGCAGATGTCCACTGTTGGTACCTTTGGTaGTTGTATTTCTCTCCAAAC +
Preference number: 4 (lower is better)
Translates to: DHGQLGSEVFQTHSADVHCWYLW*LYFSPN
Trigger: GTTTGGAGAGAAATACAACCACCAAAGGTACCAACA...GTGGACATCTGCACTGTGGGTCTGGAAGACCTCCGAACCAAGCTGACCATGATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000129898.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR CCA 90 bp CTCAGACATTATGTAGTATTGGTGAGGACACGTGAGGGACCCTTGGGGTTTTCAGGTACATGTGGTGTTTaGTGTCTTGCAGGGTCTGGT +
Preference number: 4 (lower is better)
Translates to: LRHYVVLVRTREGPLGFSGTCGV*CLAGSG
Trigger: ACCAGACCCTGCAAGACACCAAACACCACATGTACC...TGAAAACCCCAAGGGTCCCTCACGTGTCCTCACCAATACTACATAATGTCTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000156066.8
CDS-3UTR CCA 90 bp AATGTTCCCATTCTCAGACATTATGTAGTATTGGTGAGGACACGTGAGGGACCCGGATCATGGTCAGCTTaGTTCGGAGGTCTTCCAGAC +
Preference number: 4 (lower is better)
Translates to: NVPILRHYVVLVRTREGPGSWSA*FGGLPD
Trigger: GTCTGGAAGACCTCCGAACCAAGCTGACCATGATCC...GGGTCCCTCACGTGTCCTCACCAATACTACATAATGTCTGAGAATGGGAACATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000156066.8
CDS-3UTR CCA 90 bp ATCCAGGAACGCTGTCATCTCCAGCCTTGGGCATTTTCCCATCTCATTTGCTTTGCCATACAAAGCAGCTaGCGTTCTCCTACTGAGAAG +
Preference number: 4 (lower is better)
Translates to: IQERCHLQPWAFSHLICFAIQSS*RSPTEK
Trigger: CTTCTCAGTAGGAGAACGCCAGCTGCTTTGTATGGC...AAAGCAAATGAGATGGGAAAATGCCCAAGGCTGGAGATGACAGCGTTCCTGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
3UTR CAA 72 bp GTTGTGTCGAAGAAGCTCATTGGGCTCCTGACGATCTaGTTAAATACTCTGTTGTGGAGAGAGGAAGACGCC +
Preference number: 4 (lower is better)
Translates to: VVSKKLIGLLTI*LNTLLWREEDA
Trigger: GGCGTCTTCCTCTCTCCACAACAGAGTATTTAACAAGATCGTCAGGAGCCCAATGAGCTTCTTCGACACAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000129898.8
ENSMUST00000131806.8
ENSMUST00000156610.8
3UTR CAA 72 bp CTTGGCTTGGGTCTCTGTTCCTGTTCGCACACACACTaGAAGCAATCCACTGAGCTGGATGATGTAAGACAA +
Preference number: 4 (lower is better)
Translates to: LGLGLCSCSHTH*KQSTELDDVRQ
Trigger: TTGTCTTACATCATCCAGCTCAGTGGATTGCTTCAAGTGTGTGTGCGAACAGGAACAGAGACCCAAGCCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000129898.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR TCA 90 bp AGTTTCATTATTGTGTCTCTCATGAACGTTCTTTCCAAAACATGCCAGAGCATCGCCCCAAGGCTGCCATaGCGATGCACAGGATGTTGG +
Preference number: 4 (lower is better)
Translates to: SFIIVSLMNVLSKTCQSIAPRLP*RCTGCW
Trigger: CCAACATCCTGTGCATCGTCATGGCAGCCTTGGGGC...GATGCTCTGGCATGTTTTGGAAAGAACGTTCATGAGAGACACAATAATGAAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000129898.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR TCA 90 bp CTTGTTGGCAACTGTATCTGGGAATGTTCTCAGAAAGAACCCAGTAGAGGGTTTCTGTGGACCCCAGAATaGAAAAGGCGTACACTGCAC +
Preference number: 4 (lower is better)
Translates to: LVGNCIWECSQKEPSRGFLWTPE*KRRTLH
Trigger: GTGCAGTGTACGCCTTTTTCATTCTGGGGTCCACAG...AAACCCTCTACTGGGTTCTTTCTGAGAACATTCCCAGATACAGTTGCCAACAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000152438.2
CDS-3UTR TCA 90 bp TCTTCACCATCCAGAACCAACCCTGAGTCTGCCAAGAGAGATGGCCAGAAGAACAACTCATTCATTGTCTaGACCCGTTTGTCTGTCACT +
Preference number: 4 (lower is better)
Translates to: SSPSRTNPESAKRDGQKNNSFIV*TRLSVT
Trigger: AGTGACAGACAAACGGGTTCAGACAATGAATGAGTT...GTTCTTCTGGCCATCTCTCTTGGCAGACTCAGGGTTGGTTCTGGATGGTGAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR TCA 90 bp GTATCTGGGAATGTTCTCAGAAAGAACCCAGTAGAGGGTTTAGACCTTCAAGGGAATGGGAGCCAGGGCTaGGTTTCCACTTTGGACATA +
Preference number: 4 (lower is better)
Translates to: VSGNVLRKNPVEGLDLQGNGSQG*VSTLDI
Trigger: TATGTCCAAAGTGGAAACTCAGCCCTGGCTCCCATT...CCCTTGAAGGTCTAAACCCTCTACTGGGTTCTTTCTGAGAACATTCCCAGATAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000152438.2
CDS-3UTR TCA 90 bp GGCAACTGTATCTGGGAATGTTCTCAGAAAGAACCCAGTAGAGGGTTTAGACCTGGTCTTCAGGTTGAGTaGTGTAGGATGGGGGACTTT +
Preference number: 4 (lower is better)
Translates to: GNCIWECSQKEPSRGFRPGLQVE*CRMGDF
Trigger: AAAGTCCCCCATCCTACATCACTCAACCTGAAGACC...AGGTCTAAACCCTCTACTGGGTTCTTTCTGAGAACATTCCCAGATACAGTTGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000152438.2
CDS-3UTR TCA 90 bp ATCCAGGAACGCTGTCATCTCCAGCCTTGGGCATTTTCCCATCTCATTTGCTTTTGGAGACCACAGACATaGACTGTGTGTTGGTACCTT +
Preference number: 4 (lower is better)
Translates to: IQERCHLQPWAFSHLICFWRPQT*TVCWYL
Trigger: AAGGTACCAACACACAGTTCATGTCTGTGGTCTCCA...AAAGCAAATGAGATGGGAAAATGCCCAAGGCTGGAGATGACAGCGTTCCTGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR TCA 90 bp AACCTGGTCAAGTTGACAGTTGGCATTACCCTGTGTGAGCACACTCTACAACACTGGAGACCACAGACATaGACTGTGTGTTGGTACCTT +
Preference number: 4 (lower is better)
Translates to: NLVKLTVGITLCEHTLQHWRPQT*TVCWYL
Trigger: AAGGTACCAACACACAGTTCATGTCTGTGGTCTCCA...GTGTTGTAGAGTGTGCTCACACAGGGTAATGCCAACTGTCAACTTGACCAGGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000152438.2
CDS-3UTR TCA 90 bp TCTTCACCATCCAGAACCAACCCTGAGTCTGCCAAGAGAGATGGCCAGAAGAACACCCTCCAGAAGCCTTaGTATACGTGTGATATGTTT +
Preference number: 4 (lower is better)
Translates to: SSPSRTNPESAKRDGQKNTLQKP*YTCDMF
Trigger: AAACATATCACACGTATATCAAGGCTTCTGGAGGGT...GTTCTTCTGGCCATCTCTCTTGGCAGACTCAGGGTTGGTTCTGGATGGTGAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000156066.8
CDS-3UTR GCA 90 bp CTCTGGGAGTTTCATTATTGTGTCTCTCATGAACGTTCTTTCCAAAACATGCCATGTCGGCCCCAAGGCTaGCATGACGATGCACAGGAT +
Preference number: 4 (lower is better)
Translates to: LWEFHYCVSHERSFQNMPCRPQG*HDDAQD
Trigger: ATCCTGTGCATCGTCATGGCAGCCTTGGGGCCGACA...TGGCATGTTTTGGAAAGAACGTTCATGAGAGACACAATAATGAAACTCCCAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000129898.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR GCA 90 bp GTGTCGAAGAAGCTCATTGGGCTCCTGACGATCTTGTTAAATACTCTGTTGTGGGGCAATCACACTAAATaGCACAGGGGCAGTGAGCTT +
Preference number: 4 (lower is better)
Translates to: VSKKLIGLLTILLNTLLWGNHTK*HRGSEL
Trigger: AAGCTCACTGCCCCTGTGGCATTTAGTGTGATTGCC...CCACAACAGAGTATTTAACAAGATCGTCAGGAGCCCAATGAGCTTCTTCGACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000129898.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR GCA 90 bp GACAATGTTCATGAGAATGTCCATTCTGAGAGCAAACCACCTGAGCGCGCAGTTACCCCTTTCTGTAACTaGATCTGTCCTAGGAGAGCT +
Preference number: 4 (lower is better)
Translates to: DNVHENVHSESKPPERAVTPFCN*ICPRRA
Trigger: AGCTCTCCTAGGACAGATGCAGTTACAGAAAGGGGT...AACTGCGCGCTCAGGTGGTTTGCTCTCAGAATGGACATTCTCATGAACATTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000129898.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR GCA 90 bp GTTGAAGTACAGGAGGTGGCTGGAGTTTTCGTCGTTGAGTGTCTTAAACTTGCTCATTCTTCAAAGACATaGTTCCCCACGTGGGCATCC +
Preference number: 4 (lower is better)
Translates to: VEVQEVAGVFVVECLKLAHSSKT*FPTWAS
Trigger: GGATGCCCACGTGGGGAAGCATGTCTTTGAAGAATG...AGCAAGTTTAAGACACTCAACGACGAAAACTCCAGCCACCTCCTGTACTTCAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000129898.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR GCA 90 bp GGCAACTGTATCTGGGAATGTTCTCAGAAAGAACCCAGTAGAGGGTTTAGACCTCATTCTTCAAAGACATaGTTCCCCACGTGGGCATCC +
Preference number: 4 (lower is better)
Translates to: GNCIWECSQKEPSRGFRPHSSKT*FPTWAS
Trigger: GGATGCCCACGTGGGGAAGCATGTCTTTGAAGAATG...AGGTCTAAACCCTCTACTGGGTTCTTTCTGAGAACATTCCCAGATACAGTTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000152438.2
CDS-3UTR CCA 90 bp GTTGTGGAGAGAGGAAGACGCCATCAGTGTAGTGTTGGTGAAGGTAAAGCCTTTCGATGCACAGGATGTTaGCTACAACGTCCATCAGAA +
Preference number: 4 (lower is better)
Translates to: VVERGRRHQCSVGEGKAFRCTGC*LQRPSE
Trigger: TTCTGATGGACGTTGTAGCCAACATCCTGTGCATCG...AAAGGCTTTACCTTCACCAACACTACACTGATGGCGTCTTCCTCTCTCCACAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000129898.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR CCA 90 bp GTTGAAGTACAGGAGGTGGCTGGAGTTTTCGTCGTTGAGTGTCTTAAACTTGCTTTTCGAAGATTAGCGTaGAGAGGGCCACCTTCAGTC +
Preference number: 4 (lower is better)
Translates to: VEVQEVAGVFVVECLKLAFRRLA*RGPPSV
Trigger: GACTGAAGGTGGCCCTCTCCACGCTAATCTTCGAAA...AGCAAGTTTAAGACACTCAACGACGAAAACTCCAGCCACCTCCTGTACTTCAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000129898.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR CCA 90 bp GTGGGAGTTGTGTCGAAGAAGCTCATTGGGCTCCTGACGATCTTGTTAAATACTTTAGGATCGGGATGGTaGCTGGCAAGGGACAAAACA +
Preference number: 4 (lower is better)
Translates to: VGVVSKKLIGLLTILLNTLGSGW*LARDKT
Trigger: TGTTTTGTCCCTTGCCAGCCACCATCCCGATCCTAA...AGTATTTAACAAGATCGTCAGGAGCCCAATGAGCTTCTTCGACACAACTCCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000129898.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR CCA 90 bp GTATCTGGGAATGTTCTCAGAAAGAACCCAGTAGAGGGTTTAGACCTTCAAGGGTTAGGATCGGGATGGTaGCTGGCAAGGGACAAAACA +
Preference number: 4 (lower is better)
Translates to: VSGNVLRKNPVEGLDLQGLGSGW*LARDKT
Trigger: TGTTTTGTCCCTTGCCAGCCACCATCCCGATCCTAA...CCCTTGAAGGTCTAAACCCTCTACTGGGTTCTTTCTGAGAACATTCCCAGATAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000152438.2
CDS-3UTR CCA 90 bp TGTGTCGAAGAAGCTCATTGGGCTCCTGACGATCTTGTTAAATACTCTGTTGTGCTATGGTGGACACAATaGGAGCCAGGGCTGAGTTTC +
Preference number: 4 (lower is better)
Translates to: CVEEAHWAPDDLVKYSVVLWWTQ*EPGLSF
Trigger: GAAACTCAGCCCTGGCTCCCATTGTGTCCACCATAG...CACAACAGAGTATTTAACAAGATCGTCAGGAGCCCAATGAGCTTCTTCGACACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000129898.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR CCA 90 bp CAGCTTTGTCTGCACTCTTCACCATCCAGAACCAACCCTGAGTCTGCCAAGAGACGTTTCAGGAAAATGTaGCAGGTGAAAGTAGACACA +
Preference number: 4 (lower is better)
Translates to: QLCLHSSPSRTNPESAKRRFRKM*QVKVDT
Trigger: TGTGTCTACTTTCACCTGCCACATTTTCCTGAAACG...TCTCTTGGCAGACTCAGGGTTGGTTCTGGATGGTGAAGAGTGCAGACAAAGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR CCA 90 bp TGCCCGCTTTGGATGTTCAAGTTCAGGCCATCAAGAACGAGAGGGGTGTTGTCTCGTTTCAGGAAAATGTaGCAGGTGAAAGTAGACACA +
Preference number: 4 (lower is better)
Translates to: CPLWMFKFRPSRTRGVLSRFRKM*QVKVDT
Trigger: TGTGTCTACTTTCACCTGCCACATTTTCCTGAAACG...AGACAACACCCCTCTCGTTCTTGATGGCCTGAACTTGAACATCCAAAGCGGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000129898.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR CCA 90 bp CCCATTCTCAGACATTATGTAGTATTGGTGAGGACACGTGAGGGACCCTTGGGGGTTCCCATGTCAAGGTaGCATTTGCTAAAAGCAAGA +
Preference number: 4 (lower is better)
Translates to: PILRHYVVLVRTREGPLGVPMSR*HLLKAR
Trigger: TCTTGCTTTTAGCAAATGCCACCTTGACATGGGAAC...CCCCAAGGGTCCCTCACGTGTCCTCACCAATACTACATAATGTCTGAGAATGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR CCA 90 bp TGCCCGCTTTGGATGTTCAAGTTCAGGCCATCAAGAACGAGAGGGGTGTTGTCTGTTCCCATGTCAAGGTaGCATTTGCTAAAAGCAAGA +
Preference number: 4 (lower is better)
Translates to: CPLWMFKFRPSRTRGVLSVPMSR*HLLKAR
Trigger: TCTTGCTTTTAGCAAATGCCACCTTGACATGGGAAC...AGACAACACCCCTCTCGTTCTTGATGGCCTGAACTTGAACATCCAAAGCGGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000129898.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR CCA 90 bp GTCCCAACTCAGGAGAGGATGCTGCCCTCATTTAGAGTGGGTTTTCCTTGTTGGGTTCCCATGTCAAGGTaGCATTTGCTAAAAGCAAGA +
Preference number: 4 (lower is better)
Translates to: VPTQERMLPSFRVGFPCWVPMSR*HLLKAR
Trigger: TCTTGCTTTTAGCAAATGCCACCTTGACATGGGAAC...CCAACAAGGAAAACCCACTCTAAATGAGGGCAGCATCCTCTCCTGAGTTGGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000152438.2
CDS-3UTR CCA 90 bp GGAGACCAGGTACCCTCCAGAAGCCTTGATATACGTGTGATATGTTTTCCAGGTTCCCTCACATTTCCATaGAAGATCCATGCTTGCTGG +
Preference number: 4 (lower is better)
Translates to: GDQVPSRSLDIRVICFPGSLTFP*KIHACW
Trigger: CCAGCAAGCATGGATCTTCCATGGAAATGTGAGGGA...ACCTGGAAAACATATCACACGTATATCAAGGCTTCTGGAGGGTACCTGGTCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000129898.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR CCA 90 bp AAGAGAGATGGCCAGAAGAACAAGGGACACATCTCAGCCCCAGCTCACCATGTGTGTTGGTACCTTTGGTaGTTGTATTTCTCTCCAAAC +
Preference number: 4 (lower is better)
Translates to: KRDGQKNKGHISAPAHHVCWYLW*LYFSPN
Trigger: GTTTGGAGAGAAATACAACCACCAAAGGTACCAACA...CACATGGTGAGCTGGGGCTGAGATGTGTCCCTTGTTCTTCTGGCCATCTCTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR CCA 90 bp ACCAGCTTTGTCTGCACTCTTCACCATCCAGAACCAACCCTGAGTCTGCCAAGAGTGTGTTGGTACCTTTaGTGGTTGTATTTCTCTCCA +
Preference number: 4 (lower is better)
Translates to: TSFVCTLHHPEPTLSLPRVCWYL*WLYFSP
Trigger: TGGAGAGAAATACAACCACCAAAGGTACCAACACAC...TCTTGGCAGACTCAGGGTTGGTTCTGGATGGTGAAGAGTGCAGACAAAGCTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR CCA 90 bp TGCCCGCTTTGGATGTTCAAGTTCAGGCCATCAAGAACGAGAGGGGTGTTGTCTGTGTGTTGGTACCTTTaGTGGTTGTATTTCTCTCCA +
Preference number: 4 (lower is better)
Translates to: CPLWMFKFRPSRTRGVLSVCWYL*WLYFSP
Trigger: TGGAGAGAAATACAACCACCAAAGGTACCAACACAC...AGACAACACCCCTCTCGTTCTTGATGGCCTGAACTTGAACATCCAAAGCGGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000129898.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR CCA 90 bp AGGAGAGGATGCTGCCCTCATTTAGAGTGGGTTTTCCTTGTTGGCAACTGTATCTCCATCAACTCCTTGTaGGTGCCCTTTTCACAGATC +
Preference number: 4 (lower is better)
Translates to: RRGCCPHLEWVFLVGNCISINSL*VPFSQI
Trigger: GATCTGTGAAAAGGGCACCCACAAGGAGTTGATGGA...GATACAGTTGCCAACAAGGAAAACCCACTCTAAATGAGGGCAGCATCCTCTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000152438.2
CDS-3UTR CCA 90 bp TCTTCACCATCCAGAACCAACCCTGAGTCTGCCAAGAGAGATGGCCAGAAGAACTTAAATACTCTGTTGTaGAGAGAGGAAGACGCCATC +
Preference number: 4 (lower is better)
Translates to: SSPSRTNPESAKRDGQKNLNTLL*REEDAI
Trigger: GATGGCGTCTTCCTCTCTCCACAACAGAGTATTTAA...GTTCTTCTGGCCATCTCTCTTGGCAGACTCAGGGTTGGTTCTGGATGGTGAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000156066.8
CDS-3UTR CCA 90 bp CTCAGACATTATGTAGTATTGGTGAGGACACGTGAGGGACCCTTGGGGTTTTCATTGAAGTACAGGAGGTaGCTGGAGTTTTCGTCGTTG +
Preference number: 4 (lower is better)
Translates to: LRHYVVLVRTREGPLGFSLKYRR*LEFSSL
Trigger: CAACGACGAAAACTCCAGCCACCTCCTGTACTTCAA...TGAAAACCCCAAGGGTCCCTCACGTGTCCTCACCAATACTACATAATGTCTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000156066.8
CDS-3UTR CCA 90 bp AACAAAATCCAGGAACGCTGTCATCTCCAGCCTTGGGCATTTTCCCATCTCATTACTGTCTGCCCGCTTTaGATGTTCAAGTTCAGGCCA +
Preference number: 4 (lower is better)
Translates to: NKIQERCHLQPWAFSHLITVCPL*MFKFRP
Trigger: TGGCCTGAACTTGAACATCCAAAGCGGGCAGACAGT...AATGAGATGGGAAAATGCCCAAGGCTGGAGATGACAGCGTTCCTGGATTTTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000131423.8
ENSMUST00000156066.8
CDS-3UTR TCA 90 bp GTGTCGAAGAAGCTCATTGGGCTCCTGACGATCTTGTTAAATACTCTGTTGTGGGGAATCTCTTGGCGTTaGTGTCCGATGAGTCATAAG +
Preference number: 4 (lower is better)
Translates to: VSKKLIGLLTILLNTLLWGISWR*CPMSHK
Trigger: CTTATGACTCATCGGACATCAACGCCAAGAGATTCC...CCACAACAGAGTATTTAACAAGATCGTCAGGAGCCCAATGAGCTTCTTCGACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000129898.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR TCA 90 bp GCCAAGGGAAAAGATGGTAAATACCGTTTGTGTCCACAAATTCTTCTGTTTCAGTGCTGGAGGATTTGGTaGATGAGAACTGTCGGCCCC +
Preference number: 4 (lower is better)
Translates to: AKGKDGKYRLCPQILLFQCWRIW*MRTVGP
Trigger: GGGGCCGACAGTTCTCATTCACCAAATCCTCCAGCA...CTGAAACAGAAGAATTTGTGGACACAAACGGTATTTACCATCTTTTCCCTTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000152438.2
CDS-3UTR TCA 90 bp AATCACCCACAGGACCTTTACAGTCCAACCTCTGCAGCTAGTAACATCGCAAATTCGCCTGCAGAGATGTaGGTTAACGTCTTAAAGGAC +
Preference number: 4 (lower is better)
Translates to: NHPQDLYSPTSAASNIANSPAEM*VNVLKD
Trigger: GTCCTTTAAGACGTTAACTCACATCTCTGCAGGCGA...ATTTGCGATGTTACTAGCTGCAGAGGTTGGACTGTAAAGGTCCTGTGGGTGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000129898.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR TCA 90 bp TTCCAACCTACCAGCTTTGTCTGCACTCTTCACCATCCAGAACCAACCCTGAGTCATCTTCTAACAGAATaGCCTCATCACAAGACTCCA +
Preference number: 4 (lower is better)
Translates to: FQPTSFVCTLHHPEPTLSHLLTE*PHHKTP
Trigger: TGGAGTCTTGTGATGAGGTCATTCTGTTAGAAGATG...ACTCAGGGTTGGTTCTGGATGGTGAAGAGTGCAGACAAAGCTGGTAGGTTGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000131806.8
CDS-3UTR GCA 90 bp CAGCTTCCAACCTACCAGCTTTGTCTGCACTCTTCACCATCCAGAACCAACCCTTCAACACAGACACCATaGTTGCTATGTAAACCAACT +
Preference number: 4 (lower is better)
Translates to: QLPTYQLCLHSSPSRTNPSTQTP*LLCKPT
Trigger: AGTTGGTTTACATAGCAAGCATGGTGTCTGTGTTGA...AGGGTTGGTTCTGGATGGTGAAGAGTGCAGACAAAGCTGGTAGGTTGGAAGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000156066.8
CDS-3UTR GCA 90 bp TTTGAATTACGGAGAAGTGCCCGGGCCATACAAAGCAGCTGGCGTTCTCCTACTTCAACACAGACACCATaGTTGCTATGTAAACCAACT +
Preference number: 4 (lower is better)
Translates to: FELRRSARAIQSSWRSPTSTQTP*LLCKPT
Trigger: AGTTGGTTTACATAGCAAGCATGGTGTCTGTGTTGA...AGTAGGAGAACGCCAGCTGCTTTGTATGGCCCGGGCACTTCTCCGTAATTCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156066.8
CDS-3UTR CCA 90 bp AATGTTCCCATTCTCAGACATTATGTAGTATTGGTGAGGACACGTGAGGGACCCTCATGGTTTTCAGGCTaGGGTCATATCTCTCGGCAA +
Preference number: 4 (lower is better)
Translates to: NVPILRHYVVLVRTREGPSWFSG*GHISRQ
Trigger: TTGCCGAGAGATATGACCCCAGCCTGAAAACCATGA...GGGTCCCTCACGTGTCCTCACCAATACTACATAATGTCTGAGAATGGGAACATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR CCA 90 bp CTCTCAAATCACCCACAGGACCTTTACAGTCCAACCTCTGCAGCTAGTAACATCTCTTCCCAAAGGATCTaGAATCTCTTGGCGTTGATG +
Preference number: 4 (lower is better)
Translates to: LSNHPQDLYSPTSAASNISSQRI*NLLALM
Trigger: CATCAACGCCAAGAGATTCCAGATCCTTTGGGAAGA...GATGTTACTAGCTGCAGAGGTTGGACTGTAAAGGTCCTGTGGGTGATTTGAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000129898.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR CCA 90 bp CAACCTACCAGCTTTGTCTGCACTCTTCACCATCCAGAACCAACCCTGAGTCTGTGTTGGTACCTTTGGTaGTTGTATTTCTCTCCAAAC +
Preference number: 4 (lower is better)
Translates to: QPTSFVCTLHHPEPTLSLCWYLW*LYFSPN
Trigger: GTTTGGAGAGAAATACAACCACCAAAGGTACCAACA...CAGACTCAGGGTTGGTTCTGGATGGTGAAGAGTGCAGACAAAGCTGGTAGGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR CCA 90 bp CCCATTCTCAGACATTATGTAGTATTGGTGAGGACACGTGAGGGACCCTTGGGGATTGTAAATGTGCTCTaGATCCTTGAATTGCAGTCC +
Preference number: 4 (lower is better)
Translates to: PILRHYVVLVRTREGPLGIVNVL*ILELQS
Trigger: GGACTGCAATTCAAGGATCCAGAGCACATTTACAAT...CCCCAAGGGTCCCTCACGTGTCCTCACCAATACTACATAATGTCTGAGAATGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000131806.8
CDS-3UTR CCA 90 bp CAGCTTTGTCTGCACTCTTCACCATCCAGAACCAACCCTGAGTCTGCCAAGAGAATTGTAAATGTGCTCTaGATCCTTGAATTGCAGTCC +
Preference number: 4 (lower is better)
Translates to: QLCLHSSPSRTNPESAKRIVNVL*ILELQS
Trigger: GGACTGCAATTCAAGGATCCAGAGCACATTTACAAT...TCTCTTGGCAGACTCAGGGTTGGTTCTGGATGGTGAAGAGTGCAGACAAAGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000131806.8
CDS-3UTR CCA 90 bp AATCACCCACAGGACCTTTACAGTCCAACCTCTGCAGCTAGTAACATCGCAAATACCAACTGGTACATGTaGTGTTTGGTGTCTTGCAGG +
Preference number: 4 (lower is better)
Translates to: NHPQDLYSPTSAASNIANTNWYM*CLVSCR
Trigger: CCTGCAAGACACCAAACACCACATGTACCAGTTGGT...ATTTGCGATGTTACTAGCTGCAGAGGTTGGACTGTAAAGGTCCTGTGGGTGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156066.8
3UTR CAA 72 bp GATGAGCTGGTGAGCGGGAGAGGCCATAAAAATAGGTaGTCTTTCCAAATGTGCATATCTCACAGGCAGCTT +
Preference number: 4 (lower is better)
Translates to: DELVSGRGHKNR*SFQMCISHRQL
Trigger: AAGCTGCCTGTGAGATATGCACATTTGGAAAGACAACCTATTTTTATGGCCTCTCCCGCTCACCAGCTCATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000131806.8
3UTR CAA 72 bp CTGTTGTGGAGAGAGGAAGACGCCATCAGTGTAGTGTaGGTGAAGGTAAAGCCTTTGATGATGCCAAACATC +
Preference number: 4 (lower is better)
Translates to: LLWREEDAISVV*VKVKPLMMPNI
Trigger: GATGTTTGGCATCATCAAAGGCTTTACCTTCACCAACACTACACTGATGGCGTCTTCCTCTCTCCACAACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000129898.8
ENSMUST00000131806.8
ENSMUST00000156610.8
3UTR CAA 72 bp CTCATTGGGCTCCTGACGATCTTGTTAAATACTCTGTaGTGGAGAGAGGAAGACGCCATCAGTGTAGTGTTG +
Preference number: 4 (lower is better)
Translates to: LIGLLTILLNTL*WREEDAISVVL
Trigger: CAACACTACACTGATGGCGTCTTCCTCTCTCCACAACAGAGTATTTAACAAGATCGTCAGGAGCCCAATGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000129898.8
ENSMUST00000131806.8
ENSMUST00000156610.8
3UTR CAA 72 bp CAGTTGAAGTACAGGAGGTGGCTGGAGTTTTCGTCGTaGAGTGTCTTAAACTTGCTGATGCAGTCGTCCTTT +
Preference number: 4 (lower is better)
Translates to: QLKYRRWLEFSS*SVLNLLMQSSF
Trigger: AAAGGACGACTGCATCAGCAAGTTTAAGACACTCAACGACGAAAACTCCAGCCACCTCCTGTACTTCAACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000129898.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR TCA 90 bp AGGAGAGGATGCTGCCCTCATTTAGAGTGGGTTTTCCTTGTTGGCAACTGTATCAACTCATTCATTGTCTaGACCCGTTTGTCTGTCACT +
Preference number: 4 (lower is better)
Translates to: RRGCCPHLEWVFLVGNCINSFIV*TRLSVT
Trigger: AGTGACAGACAAACGGGTTCAGACAATGAATGAGTT...GATACAGTTGCCAACAAGGAAAACCCACTCTAAATGAGGGCAGCATCCTCTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000152438.2
CDS-3UTR TCA 90 bp AATGTTCCCATTCTCAGACATTATGTAGTATTGGTGAGGACACGTGAGGGACCCGCCTTGATATACGTGTaGTATGTTTTCCAGGTCACG +
Preference number: 4 (lower is better)
Translates to: NVPILRHYVVLVRTREGPALIYV*YVFQVT
Trigger: CGTGACCTGGAAAACATATCACACGTATATCAAGGC...GGGTCCCTCACGTGTCCTCACCAATACTACATAATGTCTGAGAATGGGAACATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000156066.8
CDS-3UTR TCA 90 bp CTCAGACATTATGTAGTATTGGTGAGGACACGTGAGGGACCCTTGGGGTTTTCAACCCTCCAGAAGCCTTaGTATACGTGTGATATGTTT +
Preference number: 4 (lower is better)
Translates to: LRHYVVLVRTREGPLGFSTLQKP*YTCDMF
Trigger: AAACATATCACACGTATATCAAGGCTTCTGGAGGGT...TGAAAACCCCAAGGGTCCCTCACGTGTCCTCACCAATACTACATAATGTCTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000156066.8
CDS-3UTR GCA 90 bp ACCAGCTTTGTCTGCACTCTTCACCATCCAGAACCAACCCTGAGTCTGCCAAGACGAGAAAGGCAAGATTaGAATGGAAAACTTCATTAC +
Preference number: 4 (lower is better)
Translates to: TSFVCTLHHPEPTLSLPRRERQD*NGKLHY
Trigger: GTAATGAAGTTTTCCATTGCAATCTTGCCTTTCTCG...TCTTGGCAGACTCAGGGTTGGTTCTGGATGGTGAAGAGTGCAGACAAAGCTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR GCA 90 bp AGGTACACAGCCAAGGGAAAAGATGGTAAATACCGTTTGTGTCCACAAATTCTTCAAGACTCCAGGAACTaGAACTGGTGGGTAACCAGC +
Preference number: 4 (lower is better)
Translates to: RYTAKGKDGKYRLCPQILQDSRN*NWWVTS
Trigger: GCTGGTTACCCACCAGTTGCAGTTCCTGGAGTCTTG...AAGAATTTGTGGACACAAACGGTATTTACCATCTTTTCCCTTGGCTGTGTACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000152438.2
CDS-3UTR CCA 90 bp GAAGAAAAACTAAGGGTCACCAGCAAGGCCACAACAAAGGTGACAATGTTCATGTCATGGTTTTCAGGCTaGGGTCATATCTCTCGGCAA +
Preference number: 4 (lower is better)
Translates to: EEKLRVTSKATTKVTMFMSWFSG*GHISRQ
Trigger: TTGCCGAGAGATATGACCCCAGCCTGAAAACCATGA...CATGAACATTGTCACCTTTGTTGTGGCCTTGCTGGTGACCCTTAGTTTTTCTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000129898.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR CCA 90 bp AATGTTCCCATTCTCAGACATTATGTAGTATTGGTGAGGACACGTGAGGGACCCTCTTCCCAAAGGATCTaGAATCTCTTGGCGTTGATG +
Preference number: 4 (lower is better)
Translates to: NVPILRHYVVLVRTREGPSSQRI*NLLALM
Trigger: CATCAACGCCAAGAGATTCCAGATCCTTTGGGAAGA...GGGTCCCTCACGTGTCCTCACCAATACTACATAATGTCTGAGAATGGGAACATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR CCA 90 bp CCATTTTCTGTGACTTCTGCCTGTAATTTCTCTGGGAGTTTCATTATTGTGTCTGATCGGGATGGTGGCTaGCAAGGGACAAAACAAGGC +
Preference number: 4 (lower is better)
Translates to: PFSVTSACNFSGSFIIVSDRDGG*QGTKQG
Trigger: GCCTTGTTTTGTCCCTTGCCAGCCACCATCCCGATC...AGACACAATAATGAAACTCCCAGAGAAATTACAGGCAGAAGTCACAGAAAATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000129898.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR CCA 90 bp TCTGCTCTAGAAAGACCCAGAAATACAAAGAGGGCCTTCAATCCGAGGAGTAGCCGTTTCAGGAAAATGTaGCAGGTGAAAGTAGACACA +
Preference number: 4 (lower is better)
Translates to: SALERPRNTKRAFNPRSSRFRKM*QVKVDT
Trigger: TGTGTCTACTTTCACCTGCCACATTTTCCTGAAACG...GCTACTCCTCGGATTGAAGGCCCTCTTTGTATTTCTGGGTCTTTCTAGAGCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000129898.8
CDS-3UTR CCA 90 bp CCTTTGGATGAGGCGCTGATTGAAGAAAAACTAAGGGTCACCAGCAAGGCCACATGTTGGTACCTTTGGTaGTTGTATTTCTCTCCAAAC +
Preference number: 4 (lower is better)
Translates to: PLDEALIEEKLRVTSKATCWYLW*LYFSPN
Trigger: GTTTGGAGAGAAATACAACCACCAAAGGTACCAACA...TGTGGCCTTGCTGGTGACCCTTAGTTTTTCTTCAATCAGCGCCTCATCCAAAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000129898.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR CCA 90 bp AGAAAGTTAGAATGTTCCCATTCTCAGACATTATGTAGTATTGGTGAGGACACGGATCCTGGGGGATCATaGTCAGCTTGGTTCGGAGGT +
Preference number: 4 (lower is better)
Translates to: RKLECSHSQTLCSIGEDTDPGGS*SAWFGG
Trigger: ACCTCCGAACCAAGCTGACCATGATCCCCCAGGATC...CGTGTCCTCACCAATACTACATAATGTCTGAGAATGGGAACATTCTAACTTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000156066.8
CDS-3UTR TCA 90 bp CTTGTTGGCAACTGTATCTGGGAATGTTCTCAGAAAGAACCCAGTAGAGGGTTTCTGGCCTCTGTTTCTTaGAAACGTGCCTTTTCTGAA +
Preference number: 4 (lower is better)
Translates to: LVGNCIWECSQKEPSRGFLASVS*KRAFSE
Trigger: TTCAGAAAAGGCACGTTTTCAAGAAACAGAGGCCAG...AAACCCTCTACTGGGTTCTTTCTGAGAACATTCCCAGATACAGTTGCCAACAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000152438.2
CDS-3UTR TCA 90 bp AATCACCCACAGGACCTTTACAGTCCAACCTCTGCAGCTAGTAACATCGCAAATTTCTCACCACAAAACTaGTGTTGTGTAGCACTGACT +
Preference number: 4 (lower is better)
Translates to: NHPQDLYSPTSAASNIANFSPQN*CCVALT
Trigger: AGTCAGTGCTACACAACATCAGTTTTGTGGTGAGAA...ATTTGCGATGTTACTAGCTGCAGAGGTTGGACTGTAAAGGTCCTGTGGGTGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000129898.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR TCA 90 bp GTTGAAGTACAGGAGGTGGCTGGAGTTTTCGTCGTTGAGTGTCTTAAACTTGCTTTCTCACCACAAAACTaGTGTTGTGTAGCACTGACT +
Preference number: 4 (lower is better)
Translates to: VEVQEVAGVFVVECLKLAFSPQN*CCVALT
Trigger: AGTCAGTGCTACACAACATCAGTTTTGTGGTGAGAA...AGCAAGTTTAAGACACTCAACGACGAAAACTCCAGCCACCTCCTGTACTTCAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000129898.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR TCA 90 bp GATCTTGTTAAATACTCTGTTGTGGAGAGAGGAAGACGCCATCAGTGTAGTGTTTGGAGACCACAGACATaGACTGTGTGTTGGTACCTT +
Preference number: 4 (lower is better)
Translates to: DLVKYSVVERGRRHQCSVWRPQT*TVCWYL
Trigger: AAGGTACCAACACACAGTTCATGTCTGTGGTCTCCA...AACACTACACTGATGGCGTCTTCCTCTCTCCACAACAGAGTATTTAACAAGATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000129898.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR CCA 90 bp GATCTTGTTAAATACTCTGTTGTGGAGAGAGGAAGACGCCATCAGTGTAGTGTTCGATGCACAGGATGTTaGCTACAACGTCCATCAGAA +
Preference number: 4 (lower is better)
Translates to: DLVKYSVVERGRRHQCSVRCTGC*LQRPSE
Trigger: TTCTGATGGACGTTGTAGCCAACATCCTGTGCATCG...AACACTACACTGATGGCGTCTTCCTCTCTCCACAACAGAGTATTTAACAAGATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000129898.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR CCA 90 bp AACAAAATCCAGGAACGCTGTCATCTCCAGCCTTGGGCATTTTCCCATCTCATTGTTCCCATGTCAAGGTaGCATTTGCTAAAAGCAAGA +
Preference number: 4 (lower is better)
Translates to: NKIQERCHLQPWAFSHLIVPMSR*HLLKAR
Trigger: TCTTGCTTTTAGCAAATGCCACCTTGACATGGGAAC...AATGAGATGGGAAAATGCCCAAGGCTGGAGATGACAGCGTTCCTGGATTTTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000131423.8
CDS-3UTR CCA 90 bp GATCTTGTTAAATACTCTGTTGTGGAGAGAGGAAGACGCCATCAGTGTAGTGTTTCCCTCACATTTCCATaGAAGATCCATGCTTGCTGG +
Preference number: 4 (lower is better)
Translates to: DLVKYSVVERGRRHQCSVSLTFP*KIHACW
Trigger: CCAGCAAGCATGGATCTTCCATGGAAATGTGAGGGA...AACACTACACTGATGGCGTCTTCCTCTCTCCACAACAGAGTATTTAACAAGATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000129898.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR CCA 90 bp GTATCTGGGAATGTTCTCAGAAAGAACCCAGTAGAGGGTTTAGACCTTCAAGGGGTGTGTTGGTACCTTTaGTGGTTGTATTTCTCTCCA +
Preference number: 4 (lower is better)
Translates to: VSGNVLRKNPVEGLDLQGVCWYL*WLYFSP
Trigger: TGGAGAGAAATACAACCACCAAAGGTACCAACACAC...CCCTTGAAGGTCTAAACCCTCTACTGGGTTCTTTCTGAGAACATTCCCAGATAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000152438.2
CDS-3UTR CCA 90 bp CCCTCCAGAAGCCTTGATATACGTGTGATATGTTTTCCAGGTCACGATTCCTTCGTGTGTTGGTACCTTTaGTGGTTGTATTTCTCTCCA +
Preference number: 4 (lower is better)
Translates to: PSRSLDIRVICFPGHDSFVCWYL*WLYFSP
Trigger: TGGAGAGAAATACAACCACCAAAGGTACCAACACAC...GAAGGAATCGTGACCTGGAAAACATATCACACGTATATCAAGGCTTCTGGAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000129898.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR CCA 90 bp GACAATGTTCATGAGAATGTCCATTCTGAGAGCAAACCACCTGAGCGCGCAGTTATTGTAAATGTGCTCTaGATCCTTGAATTGCAGTCC +
Preference number: 4 (lower is better)
Translates to: DNVHENVHSESKPPERAVIVNVL*ILELQS
Trigger: GGACTGCAATTCAAGGATCCAGAGCACATTTACAAT...AACTGCGCGCTCAGGTGGTTTGCTCTCAGAATGGACATTCTCATGAACATTGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000129898.8
ENSMUST00000131806.8
CDS-3UTR CCA 90 bp CTTGTTGGCAACTGTATCTGGGAATGTTCTCAGAAAGAACCCAGTAGAGGGTTTTCAGGGTCTCCACCATaGCTACATTGTAAATGTGCT +
Preference number: 4 (lower is better)
Translates to: LVGNCIWECSQKEPSRGFSGSPP*LHCKCA
Trigger: AGCACATTTACAATGTAGCCATGGTGGAGACCCTGA...AAACCCTCTACTGGGTTCTTTCTGAGAACATTCCCAGATACAGTTGCCAACAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000152438.2
CDS-3UTR CCA 90 bp AACAAAATCCAGGAACGCTGTCATCTCCAGCCTTGGGCATTTTCCCATCTCATTTTAAATACTCTGTTGTaGAGAGAGGAAGACGCCATC +
Preference number: 4 (lower is better)
Translates to: NKIQERCHLQPWAFSHLILNTLL*REEDAI
Trigger: GATGGCGTCTTCCTCTCTCCACAACAGAGTATTTAA...AATGAGATGGGAAAATGCCCAAGGCTGGAGATGACAGCGTTCCTGGATTTTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000131423.8
ENSMUST00000156066.8
CDS-3UTR TCA 90 bp AAACTAAGGGTCACCAGCAAGGCCACAACAAAGGTGACAATGTTCATGAGAATGCATCTTCTAACAGAATaGCCTCATCACAAGACTCCA +
Preference number: 4 (lower is better)
Translates to: KLRVTSKATTKVTMFMRMHLLTE*PHHKTP
Trigger: TGGAGTCTTGTGATGAGGTCATTCTGTTAGAAGATG...CATTCTCATGAACATTGTCACCTTTGTTGTGGCCTTGCTGGTGACCCTTAGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000129898.8
ENSMUST00000131806.8
CDS-3UTR TCA 90 bp TTGGCAACTGTATCTGGGAATGTTCTCAGAAAGAACCCAGTAGAGGGTTTAGACCATCTTCTAACAGAATaGCCTCATCACAAGACTCCA +
Preference number: 4 (lower is better)
Translates to: LATVSGNVLRKNPVEGLDHLLTE*PHHKTP
Trigger: TGGAGTCTTGTGATGAGGTCATTCTGTTAGAAGATG...GTCTAAACCCTCTACTGGGTTCTTTCTGAGAACATTCCCAGATACAGTTGCCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000152438.2
CDS-3UTR GCA 90 bp TCTGCTCTAGAAAGACCCAGAAATACAAAGAGGGCCTTCAATCCGAGGAGTAGCCGAGAAAGGCAAGATTaGAATGGAAAACTTCATTAC +
Preference number: 4 (lower is better)
Translates to: SALERPRNTKRAFNPRSSRERQD*NGKLHY
Trigger: GTAATGAAGTTTTCCATTGCAATCTTGCCTTTCTCG...GCTACTCCTCGGATTGAAGGCCCTCTTTGTATTTCTGGGTCTTTCTAGAGCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000129898.8
CDS-3UTR GCA 90 bp CAAATCACCCACAGGACCTTTACAGTCCAACCTCTGCAGCTAGTAACATCGCAACGAGAAAGGCAAGATTaGAATGGAAAACTTCATTAC +
Preference number: 4 (lower is better)
Translates to: QITHRTFTVQPLQLVTSQRERQD*NGKLHY
Trigger: GTAATGAAGTTTTCCATTGCAATCTTGCCTTTCTCG...TTGCGATGTTACTAGCTGCAGAGGTTGGACTGTAAAGGTCCTGTGGGTGATTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000129898.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR GCA 90 bp AGGTACACAGCCAAGGGAAAAGATGGTAAATACCGTTTGTGTCCACAAATTCTTACCCCTTTCTGTAACTaGATCTGTCCTAGGAGAGCT +
Preference number: 4 (lower is better)
Translates to: RYTAKGKDGKYRLCPQILTPFCN*ICPRRA
Trigger: AGCTCTCCTAGGACAGATGCAGTTACAGAAAGGGGT...AAGAATTTGTGGACACAAACGGTATTTACCATCTTTTCCCTTGGCTGTGTACCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000152438.2
CDS-3UTR CCA 90 bp AAACTAAGGGTCACCAGCAAGGCCACAACAAAGGTGACAATGTTCATGAGAATGGTTCCCATGTCAAGGTaGCATTTGCTAAAAGCAAGA +
Preference number: 4 (lower is better)
Translates to: KLRVTSKATTKVTMFMRMVPMSR*HLLKAR
Trigger: TCTTGCTTTTAGCAAATGCCACCTTGACATGGGAAC...CATTCTCATGAACATTGTCACCTTTGTTGTGGCCTTGCTGGTGACCCTTAGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000129898.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR CCA 90 bp AGGTACACAGCCAAGGGAAAAGATGGTAAATACCGTTTGTGTCCACAAATTCTTTCCCTCACATTTCCATaGAAGATCCATGCTTGCTGG +
Preference number: 4 (lower is better)
Translates to: RYTAKGKDGKYRLCPQILSLTFP*KIHACW
Trigger: CCAGCAAGCATGGATCTTCCATGGAAATGTGAGGGA...AAGAATTTGTGGACACAAACGGTATTTACCATCTTTTCCCTTGGCTGTGTACCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000152438.2
CDS-3UTR CCA 90 bp GGCAACTGTATCTGGGAATGTTCTCAGAAAGAACCCAGTAGAGGGTTTAGACCTTGTTGGTACCTTTGGTaGTTGTATTTCTCTCCAAAC +
Preference number: 4 (lower is better)
Translates to: GNCIWECSQKEPSRGFRPCWYLW*LYFSPN
Trigger: GTTTGGAGAGAAATACAACCACCAAAGGTACCAACA...AGGTCTAAACCCTCTACTGGGTTCTTTCTGAGAACATTCCCAGATACAGTTGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000152438.2
CDS-3UTR CCA 90 bp GGCAACTGTATCTGGGAATGTTCTCAGAAAGAACCCAGTAGAGGGTTTAGACCTATTGTAAATGTGCTCTaGATCCTTGAATTGCAGTCC +
Preference number: 4 (lower is better)
Translates to: GNCIWECSQKEPSRGFRPIVNVL*ILELQS
Trigger: GGACTGCAATTCAAGGATCCAGAGCACATTTACAAT...AGGTCTAAACCCTCTACTGGGTTCTTTCTGAGAACATTCCCAGATACAGTTGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000152438.2
CDS-3UTR GCA 90 bp AGAAAGTTAGAATGTTCCCATTCTCAGACATTATGTAGTATTGGTGAGGACACGACCCCTTTCTGTAACTaGATCTGTCCTAGGAGAGCT +
Preference number: 4 (lower is better)
Translates to: RKLECSHSQTLCSIGEDTTPFCN*ICPRRA
Trigger: AGCTCTCCTAGGACAGATGCAGTTACAGAAAGGGGT...CGTGTCCTCACCAATACTACATAATGTCTGAGAATGGGAACATTCTAACTTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR GCA 90 bp CCATTTTCTGTGACTTCTGCCTGTAATTTCTCTGGGAGTTTCATTATTGTGTCTACAATCCCAACTGTCTaGCCGCTTTGGATGTTCAAG +
Preference number: 4 (lower is better)
Translates to: PFSVTSACNFSGSFIIVSTIPTV*PLWMFK
Trigger: CTTGAACATCCAAAGCGGGCAGACAGTTGGGATTGT...AGACACAATAATGAAACTCCCAGAGAAATTACAGGCAGAAGTCACAGAAAATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156066.8
CDS-3UTR GCA 90 bp AGAAAGTTAGAATGTTCCCATTCTCAGACATTATGTAGTATTGGTGAGGACACGGTTCTTTCCAAAACATaGCAGAGCATCTCGTCGGTG +
Preference number: 4 (lower is better)
Translates to: RKLECSHSQTLCSIGEDTVLSKT*QSISSV
Trigger: CACCGACGAGATGCTCTGGCATGTTTTGGAAAGAAC...CGTGTCCTCACCAATACTACATAATGTCTGAGAATGGGAACATTCTAACTTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000156066.8
3UTR CAA 72 bp CAGAGATATAATACCTGTTATTGGAAAATGACGCTGTaGGGCTCTGGAAATACAGTGGCAATGTCTGCTCTA +
Preference number: 4 (lower is better)
Translates to: QRYNTCYWKMTL*GSGNTVAMSAL
Trigger: TAGAGCAGACATTGCCACTGTATTTCCAGAGCCCAACAGCGTCATTTTCCAATAACAGGTATTATATCTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000129898.8
CDS-3UTR TCA 90 bp AGGTACACAGCCAAGGGAAAAGATGGTAAATACCGTTTGTGTCCACAAATTCTTTTCTCACCACAAAACTaGTGTTGTGTAGCACTGACT +
Preference number: 4 (lower is better)
Translates to: RYTAKGKDGKYRLCPQILFSPQN*CCVALT
Trigger: AGTCAGTGCTACACAACATCAGTTTTGTGGTGAGAA...AAGAATTTGTGGACACAAACGGTATTTACCATCTTTTCCCTTGGCTGTGTACCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000152438.2
CDS-3UTR GCA 90 bp CTTGTTGGCAACTGTATCTGGGAATGTTCTCAGAAAGAACCCAGTAGAGGGTTTCGAGAAAGGCAAGATTaGAATGGAAAACTTCATTAC +
Preference number: 4 (lower is better)
Translates to: LVGNCIWECSQKEPSRGFRERQD*NGKLHY
Trigger: GTAATGAAGTTTTCCATTGCAATCTTGCCTTTCTCG...AAACCCTCTACTGGGTTCTTTCTGAGAACATTCCCAGATACAGTTGCCAACAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000152438.2
CDS-3UTR CCA 90 bp AGAAAGTTAGAATGTTCCCATTCTCAGACATTATGTAGTATTGGTGAGGACACGTCTTCCCAAAGGATCTaGAATCTCTTGGCGTTGATG +
Preference number: 4 (lower is better)
Translates to: RKLECSHSQTLCSIGEDTSSQRI*NLLALM
Trigger: CATCAACGCCAAGAGATTCCAGATCCTTTGGGAAGA...CGTGTCCTCACCAATACTACATAATGTCTGAGAATGGGAACATTCTAACTTTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR CCA 90 bp GCCAAGGGAAAAGATGGTAAATACCGTTTGTGTCCACAAATTCTTCTGTTTCAGCGTTTCAGGAAAATGTaGCAGGTGAAAGTAGACACA +
Preference number: 4 (lower is better)
Translates to: AKGKDGKYRLCPQILLFQRFRKM*QVKVDT
Trigger: TGTGTCTACTTTCACCTGCCACATTTTCCTGAAACG...CTGAAACAGAAGAATTTGTGGACACAAACGGTATTTACCATCTTTTCCCTTGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000152438.2
3UTR CAA 72 bp AGGTACACAGCCAAGGGAAAAGATGGTAAATACCGTTaGTGTCCACAAATTCTTCTGTTTCAGGTTCTTTTC +
Preference number: 4 (lower is better)
Translates to: RYTAKGKDGKYR*CPQILLFQVLF
Trigger: GAAAAGAACCTGAAACAGAAGAATTTGTGGACACAAACGGTATTTACCATCTTTTCCCTTGGCTGTGTACCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000152438.2
CDS-3UTR CAA 90 bp GTGGCCAGGGCTGCTTGGCTCCATGGTCGGGCTTCTGTTCTCACATGTCCATCGGCCGGCCTGTGGGAGTaGTGTCGAAGAAGCTCATTG +
Preference number: 5 (lower is better)
Translates to: VARAAWLHGRASVLTCPSAGLWE*CRRSSL
Trigger: CAATGAGCTTCTTCGACACAACTCCCACAGGCCGGC...CGATGGACATGTGAGAACAGAAGCCCGACCATGGAGCCAAGCAGCCCTGGCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000156066.8
CDS-3UTR CAA 90 bp GGCTGTGGCCAGGGCTGCTTGGCTCCATGGTCGGGCTTCTGTTCTCACATGTCCATCTGGGTCTTCAGGTaGAGTGATGTAGGATGGGGG +
Preference number: 5 (lower is better)
Translates to: GCGQGCLAPWSGFCSHMSIWVFR*SDVGWG
Trigger: CCCCCATCCTACATCACTCAACCTGAAGACCCAGAT...GGACATGTGAGAACAGAAGCCCGACCATGGAGCCAAGCAGCCCTGGCCACAGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080115.10
ENSMUST00000129898.8
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR CAA 90 bp GTCCTTGAACGTTATCTCCCCTCGGCTCGGCCAGTCTTTGGGACAGGTCCCCACCTCTGGATCCTTGAATaGCAGTCCCCGGAGGTTGTG +
Preference number: 5 (lower is better)
Translates to: VLERYLPSARPVFGTGPHLWILE*QSPEVV
Trigger: CACAACCTCCGGGGACTGCAATTCAAGGATCCAGAG...GTGGGGACCTGTCCCAAAGACTGGCCGAGCCGAGGGGAGATAACGTTCAAGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000129898.8
ENSMUST00000131806.8
CDS-3UTR CAA 90 bp GGGCTGCTTGGCTCCATGGTCGGGCTTCTGTTCTCACATGTCCATCGCCTCCTCTCTGCGGAGGTGAACTaGGCTTGGGTCTCTGTTCCT +
Preference number: 5 (lower is better)
Translates to: GLLGSMVGLLFSHVHRLLSAEVN*AWVSVP
Trigger: AGGAACAGAGACCCAAGCCAAGTTCACCTCCGCAGA...GAGGAGGCGATGGACATGTGAGAACAGAAGCCCGACCATGGAGCCAAGCAGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000156066.8
CDS CCA 90 bp GTGCCAACCTTGCACGGGGTCGCACTGGGATCATGGTTTTCAGGCTaGGGTCATATCTCTCGGCAAAGGATCTCCGATGGCCTCTGCGAT +
Preference number: 5 (lower is better)
Translates to: VPTLHGVALGSWFSG*GHISRQRISDGLCD
Trigger: ATCGCAGAGGCCATCGGAGATCCTTTGCCGAGAGATATGACCCCAGCCTGAAAACCATGATCCCAGTGCGACCCCGTGCAAGGTTGGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000080115.10
ENSMUST00000129898.8
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000152438.2
ENSMUST00000156610.8
CDS CCA 90 bp ATGCACAGGATGTTGGCTACAACGTCCATCAGAACTCGGGTTCTCTaGAATTTCCAGACCACGCGGCCCAGGGAGGCCTTCTCAGGCCCT +
Preference number: 5 (lower is better)
Translates to: MHRMLATTSIRTRVL*NFQTTRPREAFSGP
Trigger: AGGGCCTGAGAAGGCCTCCCTGGGCCGCGTGGTCTGGAAATTCCAGAGAACCCGAGTTCTGATGGACGTTGTAGCCAACATCCTGTGCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000080115.10
ENSMUST00000129898.8
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000152438.2
ENSMUST00000156610.8
CDS-3UTR CAA 90 bp CACTCTTCACCATCCAGAACCAACCCTGAGTCTGCCAAGAGAGATGGCCAGAAGGATTGGGTGCCAACCTaGCACGGGGTCGCACTGGGA +
Preference number: 5 (lower is better)
Translates to: HSSPSRTNPESAKRDGQKDWVPT*HGVALG
Trigger: TCCCAGTGCGACCCCGTGCAAGGTTGGCACCCAATC...CTTCTGGCCATCTCTCTTGGCAGACTCAGGGTTGGTTCTGGATGGTGAAGAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR CAA 90 bp GGGCTGCTTGGCTCCATGGTCGGGCTTCTGTTCTCACATGTCCATCGCCTCCTCATCTGGGTCTTCAGGTaGAGTGATGTAGGATGGGGG +
Preference number: 5 (lower is better)
Translates to: GLLGSMVGLLFSHVHRLLIWVFR*SDVGWG
Trigger: CCCCCATCCTACATCACTCAACCTGAAGACCCAGAT...GAGGAGGCGATGGACATGTGAGAACAGAAGCCCGACCATGGAGCCAAGCAGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080115.10
ENSMUST00000129898.8
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR CAA 90 bp GTCCTTGAACGTTATCTCCCCTCGGCTCGGCCAGTCTTTGGGACAGGTCCCCACATCTGGGTCTTCAGGTaGAGTGATGTAGGATGGGGG +
Preference number: 5 (lower is better)
Translates to: VLERYLPSARPVFGTGPHIWVFR*SDVGWG
Trigger: CCCCCATCCTACATCACTCAACCTGAAGACCCAGAT...GTGGGGACCTGTCCCAAAGACTGGCCGAGCCGAGGGGAGATAACGTTCAAGGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000129898.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR CAA 90 bp AGGGGCTGTGGCCAGGGCTGCTTGGCTCCATGGTCGGGCTTCTGTTCTCACATGACAAGGGTGTCTGTCTaGGAATCCATGGAGGCAGTA +
Preference number: 5 (lower is better)
Translates to: RGCGQGCLAPWSGFCSHMTRVSV*ESMEAV
Trigger: TACTGCCTCCATGGATTCCAAGACAGACACCCTTGT...CATGTGAGAACAGAAGCCCGACCATGGAGCCAAGCAGCCCTGGCCACAGCCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
CDS-3UTR CAA 90 bp CAGCTTCCAACCTACCAGCTTTGTCTGCACTCTTCACCATCCAGAACCAACCCTGATTGGGTGCCAACCTaGCACGGGGTCGCACTGGGA +
Preference number: 5 (lower is better)
Translates to: QLPTYQLCLHSSPSRTNPDWVPT*HGVALG
Trigger: TCCCAGTGCGACCCCGTGCAAGGTTGGCACCCAATC...AGGGTTGGTTCTGGATGGTGAAGAGTGCAGACAAAGCTGGTAGGTTGGAAGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR CAA 90 bp CTTGGCTTGGGTCTCTGTTCCTGTTCGCACACACACTTGAAGCAATCCACTGAGGATTGGGTGCCAACCTaGCACGGGGTCGCACTGGGA +
Preference number: 5 (lower is better)
Translates to: LGLGLCSCSHTHLKQSTEDWVPT*HGVALG
Trigger: TCCCAGTGCGACCCCGTGCAAGGTTGGCACCCAATC...CTCAGTGGATTGCTTCAAGTGTGTGTGCGAACAGGAACAGAGACCCAAGCCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000129898.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR CAA 90 bp CTCTATGCAGACAGGGGATGCCTAGCATGTACTCCCAGGTACACAGCCAAGGGAGCATCATCCACAGGATaGGGTGCCAACCTTGCACGG +
Preference number: 5 (lower is better)
Translates to: LYADRGCLACTPRYTAKGASSTG*GANLAR
Trigger: CCGTGCAAGGTTGGCACCCAATCCTGTGGATGATGC...TCCCTTGGCTGTGTACCTGGGAGTACATGCTAGGCATCCCCTGTCTGCATAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000152438.2
CDS-3UTR CAA 90 bp GGCGTGGATGACGCCCAGACCCTGTATGGAGGAGGTGATGTGAGAGAACCAAGGGCTTCGGCCACTGCTTaGACCGAGAAAGGCAAGATT +
Preference number: 5 (lower is better)
Translates to: GVDDAQTLYGGGDVREPRASATA*TEKGKI
Trigger: AATCTTGCCTTTCTCGGTCAAAGCAGTGGCCGAAGC...CCTTGGTTCTCTCACATCACCTCCTCCATACAGGGTCTGGGCGTCATCCACGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000129898.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR CAA 90 bp AGGGCTGCTTGGCTCCATGGTCGGGCTTCTGTTCTCACATGTCCATCGCCTCCTGCTTCGGCCACTGCTTaGACCGAGAAAGGCAAGATT +
Preference number: 5 (lower is better)
Translates to: RAAWLHGRASVLTCPSPPASATA*TEKGKI
Trigger: AATCTTGCCTTTCTCGGTCAAAGCAGTGGCCGAAGC...AGGAGGCGATGGACATGTGAGAACAGAAGCCCGACCATGGAGCCAAGCAGCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080115.10
ENSMUST00000129898.8
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR CAA 90 bp TCCGGAGCCCGTCCTTCCCACAATCCCAACTGTCTGCCCGCTTTGGATGTTCAAATGTGCTCTGGATCCTaGAATTGCAGTCCCCGGAGG +
Preference number: 5 (lower is better)
Translates to: SGARPSHNPNCLPALDVQMCSGS*NCSPRR
Trigger: CCTCCGGGGACTGCAATTCAAGGATCCAGAGCACAT...TTGAACATCCAAAGCGGGCAGACAGTTGGGATTGTGGGAAGGACGGGCTCCGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000129898.8
ENSMUST00000131806.8
CDS-3UTR CAA 90 bp GAACAAGGGACACATCTCAGCCCCAGCTCACCATGTGCTCCATGGGTGGGAGGGTTGCAGGCTGTCTTATaGTTCTGGGATGCACAGACG +
Preference number: 5 (lower is better)
Translates to: EQGTHLSPSSPCAPWVGGLQAVL*FWDAQT
Trigger: CGTCTGTGCATCCCAGAACAATAAGACAGCCTGCAA...CCCTCCCACCCATGGAGCACATGGTGAGCTGGGGCTGAGATGTGTCCCTTGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000156066.8
CDS-3UTR CAA 90 bp AGGGGCTGTGGCCAGGGCTGCTTGGCTCCATGGTCGGGCTTCTGTTCTCACATGGCCATCAGTGTAGTGTaGGTGAAGGTAAAGCCTTTG +
Preference number: 5 (lower is better)
Translates to: RGCGQGCLAPWSGFCSHMAISVV*VKVKPL
Trigger: CAAAGGCTTTACCTTCACCAACACTACACTGATGGC...CATGTGAGAACAGAAGCCCGACCATGGAGCCAAGCAGCCCTGGCCACAGCCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000156066.8
CDS-3UTR CAA 90 bp ATGGCCAGAAGAACAAGGGACACATCTCAGCCCCAGCTCACCATGTGCTCCATGGCCGGCCTGTGGGAGTaGTGTCGAAGAAGCTCATTG +
Preference number: 5 (lower is better)
Translates to: MARRTRDTSQPQLTMCSMAGLWE*CRRSSL
Trigger: CAATGAGCTTCTTCGACACAACTCCCACAGGCCGGC...CATGGAGCACATGGTGAGCTGGGGCTGAGATGTGTCCCTTGTTCTTCTGGCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000156066.8
CDS-3UTR CAA 90 bp CAACCTACCAGCTTTGTCTGCACTCTTCACCATCCAGAACCAACCCTGAGTCTGCGGCTCGGCCAGTCTTaGGGACAGGTCCCCACTTTG +
Preference number: 5 (lower is better)
Translates to: QPTSFVCTLHHPEPTLSLRLGQS*GQVPTL
Trigger: CAAAGTGGGGACCTGTCCCAAAGACTGGCCGAGCCG...CAGACTCAGGGTTGGTTCTGGATGGTGAAGAGTGCAGACAAAGCTGGTAGGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000156066.8
CDS-3UTR CAA 90 bp GTGGCCAGGGCTGCTTGGCTCCATGGTCGGGCTTCTGTTCTCACATGTCCATCGAGAACGAGAGGGGTGTaGTCTCTGTATCTCATCCGA +
Preference number: 5 (lower is better)
Translates to: VARAAWLHGRASVLTCPSRTRGV*SLYLIR
Trigger: TCGGATGAGATACAGAGACAACACCCCTCTCGTTCT...CGATGGACATGTGAGAACAGAAGCCCGACCATGGAGCCAAGCAGCCCTGGCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000156066.8
CDS-3UTR CAA 90 bp AGAACAAGGGACACATCTCAGCCCCAGCTCACCATGTGCTCCATGGGTGGGAGGAACTGTCTGCCCGCTTaGGATGTTCAAGTTCAGGCC +
Preference number: 5 (lower is better)
Translates to: RTRDTSQPQLTMCSMGGRNCLPA*DVQVQA
Trigger: GGCCTGAACTTGAACATCCAAAGCGGGCAGACAGTT...CCTCCCACCCATGGAGCACATGGTGAGCTGGGGCTGAGATGTGTCCCTTGTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000156066.8
CDS-3UTR CAA 90 bp AGAACAAGGGACACATCTCAGCCCCAGCTCACCATGTGCTCCATGGGTGGGAGGCCCAAGGGGTCCAAGTaGTACCTACAAACAGGACAG +
Preference number: 5 (lower is better)
Translates to: RTRDTSQPQLTMCSMGGRPKGSK*YLQTGQ
Trigger: CTGTCCTGTTTGTAGGTACAACTTGGACCCCTTGGG...CCTCCCACCCATGGAGCACATGGTGAGCTGGGGCTGAGATGTGTCCCTTGTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000156066.8
CDS CCA 90 bp ATGGTTTTCAGGCTGGGGTCATATCTCTCGGCAAAGGATCTCCGATaGCCTCTGCGATCCAGGTCTGAGATAAGGTACGGGCCTTCACCC +
Preference number: 5 (lower is better)
Translates to: MVFRLGSYLSAKDLR*PLRSRSEIRYGPSP
Trigger: GGGTGAAGGCCCGTACCTTATCTCAGACCTGGATCGCAGAGGCCATCGGAGATCCTTTGCCGAGAGATATGACCCCAGCCTGAAAACCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000080115.10
ENSMUST00000129898.8
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000152438.2
ENSMUST00000156610.8
CDS-3UTR CAA 90 bp TTCCAACCTACCAGCTTTGTCTGCACTCTTCACCATCCAGAACCAACCCTGAGTGATTGGGTGCCAACCTaGCACGGGGTCGCACTGGGA +
Preference number: 5 (lower is better)
Translates to: FQPTSFVCTLHHPEPTLSDWVPT*HGVALG
Trigger: TCCCAGTGCGACCCCGTGCAAGGTTGGCACCCAATC...ACTCAGGGTTGGTTCTGGATGGTGAAGAGTGCAGACAAAGCTGGTAGGTTGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR CAA 90 bp TTTCCCCACTTTTATTTCATCTGGGTCCCAACTCAGGAGAGGATGCTGCCCTCAGATTGGGTGCCAACCTaGCACGGGGTCGCACTGGGA +
Preference number: 5 (lower is better)
Translates to: FPHFYFIWVPTQERMLPSDWVPT*HGVALG
Trigger: TCCCAGTGCGACCCCGTGCAAGGTTGGCACCCAATC...TGAGGGCAGCATCCTCTCCTGAGTTGGGACCCAGATGAAATAAAAGTGGGGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000152438.2
CDS-3UTR CAA 90 bp CCATCCAGAACCAACCCTGAGTCTGCCAAGAGAGATGGCCAGAAGAACAAGGGAGCATCATCCACAGGATaGGGTGCCAACCTTGCACGG +
Preference number: 5 (lower is better)
Translates to: PSRTNPESAKRDGQKNKGASSTG*GANLAR
Trigger: CCGTGCAAGGTTGGCACCCAATCCTGTGGATGATGC...TCCCTTGTTCTTCTGGCCATCTCTCTTGGCAGACTCAGGGTTGGTTCTGGATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR CAA 90 bp CACCATCCAGAACCAACCCTGAGTCTGCCAAGAGAGATGGCCAGAAGAACAAGGGCATCATCCACAGGATaGGGTGCCAACCTTGCACGG +
Preference number: 5 (lower is better)
Translates to: HHPEPTLSLPREMARRTRASSTG*GANLAR
Trigger: CCGTGCAAGGTTGGCACCCAATCCTGTGGATGATGC...CCTTGTTCTTCTGGCCATCTCTCTTGGCAGACTCAGGGTTGGTTCTGGATGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR CAA 90 bp CAACTGTCTGCCCGCTTTGGATGTTCAAGTTCAGGCCATCAAGAACGAGAGGGGGCATCATCCACAGGATaGGGTGCCAACCTTGCACGG +
Preference number: 5 (lower is better)
Translates to: QLSARFGCSSSGHQEREGASSTG*GANLAR
Trigger: CCGTGCAAGGTTGGCACCCAATCCTGTGGATGATGC...CCCCTCTCGTTCTTGATGGCCTGAACTTGAACATCCAAAGCGGGCAGACAGTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000129898.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR CAA 90 bp GTGGCCAGGGCTGCTTGGCTCCATGGTCGGGCTTCTGTTCTCACATGTCCATCGAATGTGCTGGAGGATTaGGTGAATGAGAACTGTCGG +
Preference number: 5 (lower is better)
Translates to: VARAAWLHGRASVLTCPSNVLED*VNENCR
Trigger: CCGACAGTTCTCATTCACCAAATCCTCCAGCACATT...CGATGGACATGTGAGAACAGAAGCCCGACCATGGAGCCAAGCAGCCCTGGCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080115.10
ENSMUST00000129898.8
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR CAA 90 bp GCCAGAAGAACAAGGGACACATCTCAGCCCCAGCTCACCATGTGCTCCATGGGTGCTTCGGCCACTGCTTaGACCGAGAAAGGCAAGATT +
Preference number: 5 (lower is better)
Translates to: ARRTRDTSQPQLTMCSMGASATA*TEKGKI
Trigger: AATCTTGCCTTTCTCGGTCAAAGCAGTGGCCGAAGC...ACCCATGGAGCACATGGTGAGCTGGGGCTGAGATGTGTCCCTTGTTCTTCTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR CAA 90 bp GTGGCCAGGGCTGCTTGGCTCCATGGTCGGGCTTCTGTTCTCACATGTCCATCGATGGAAGATCCATGCTaGCTGGGAAACGTAAGCCAA +
Preference number: 5 (lower is better)
Translates to: VARAAWLHGRASVLTCPSMEDPC*LGNVSQ
Trigger: TTGGCTTACGTTTCCCAGCAAGCATGGATCTTCCAT...CGATGGACATGTGAGAACAGAAGCCCGACCATGGAGCCAAGCAGCCCTGGCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080115.10
ENSMUST00000129898.8
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR CAA 90 bp GGGCTGCTTGGCTCCATGGTCGGGCTTCTGTTCTCACATGTCCATCGCCTCCTCGCCATCAGTGTAGTGTaGGTGAAGGTAAAGCCTTTG +
Preference number: 5 (lower is better)
Translates to: GLLGSMVGLLFSHVHRLLAISVV*VKVKPL
Trigger: CAAAGGCTTTACCTTCACCAACACTACACTGATGGC...GAGGAGGCGATGGACATGTGAGAACAGAAGCCCGACCATGGAGCCAAGCAGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000156066.8
CDS-3UTR CAA 90 bp CACTCTTCACCATCCAGAACCAACCCTGAGTCTGCCAAGAGAGATGGCCAGAAGGCCGGCCTGTGGGAGTaGTGTCGAAGAAGCTCATTG +
Preference number: 5 (lower is better)
Translates to: HSSPSRTNPESAKRDGQKAGLWE*CRRSSL
Trigger: CAATGAGCTTCTTCGACACAACTCCCACAGGCCGGC...CTTCTGGCCATCTCTCTTGGCAGACTCAGGGTTGGTTCTGGATGGTGAAGAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000156066.8
CDS-3UTR CAA 90 bp AGGGCTGCTTGGCTCCATGGTCGGGCTTCTGTTCTCACATGTCCATCGCCTCCTTGTTCGCACACACACTaGAAGCAATCCACTGAGCTG +
Preference number: 5 (lower is better)
Translates to: RAAWLHGRASVLTCPSPPCSHTH*KQSTEL
Trigger: CAGCTCAGTGGATTGCTTCAAGTGTGTGTGCGAACA...AGGAGGCGATGGACATGTGAGAACAGAAGCCCGACCATGGAGCCAAGCAGCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000156066.8
CDS-3UTR CAA 90 bp AGAACAAGGGACACATCTCAGCCCCAGCTCACCATGTGCTCCATGGGTGGGAGGTGTTCGCACACACACTaGAAGCAATCCACTGAGCTG +
Preference number: 5 (lower is better)
Translates to: RTRDTSQPQLTMCSMGGRCSHTH*KQSTEL
Trigger: CAGCTCAGTGGATTGCTTCAAGTGTGTGTGCGAACA...CCTCCCACCCATGGAGCACATGGTGAGCTGGGGCTGAGATGTGTCCCTTGTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000156066.8
CDS-3UTR CAA 90 bp AGAGAGATGGCCAGAAGAACAAGGGACACATCTCAGCCCCAGCTCACCATGTGCTCTGCGGAGGTGAACTaGGCTTGGGTCTCTGTTCCT +
Preference number: 5 (lower is better)
Translates to: REMARRTRDTSQPQLTMCSAEVN*AWVSVP
Trigger: AGGAACAGAGACCCAAGCCAAGTTCACCTCCGCAGA...GCACATGGTGAGCTGGGGCTGAGATGTGTCCCTTGTTCTTCTGGCCATCTCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000156066.8
CDS-3UTR CAA 90 bp TTCCAACCTACCAGCTTTGTCTGCACTCTTCACCATCCAGAACCAACCCTGAGTCGGCTCGGCCAGTCTTaGGGACAGGTCCCCACTTTG +
Preference number: 5 (lower is better)
Translates to: FQPTSFVCTLHHPEPTLSRLGQS*GQVPTL
Trigger: CAAAGTGGGGACCTGTCCCAAAGACTGGCCGAGCCG...ACTCAGGGTTGGTTCTGGATGGTGAAGAGTGCAGACAAAGCTGGTAGGTTGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000156066.8
CDS-3UTR CAA 90 bp AGGACACGTGAGGGACCCTTGGGGTTTTCAGAAGTGAGAGGCAGCTTCCAACCTGGGATCATGGTCAGCTaGGTTCGGAGGTCTTCCAGA +
Preference number: 5 (lower is better)
Translates to: RTREGPLGFSEVRGSFQPGIMVS*VRRSSR
Trigger: TCTGGAAGACCTCCGAACCAAGCTGACCATGATCCC...AGGTTGGAAGCTGCCTCTCACTTCTGAAAACCCCAAGGGTCCCTCACGTGTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000156066.8
CDS TCA 90 bp TGTCCACAGTCAGCGTGTGCTTGTAACTTCGAATCATCACCGGTGTaGGCCAGGAAAACGTGGCGAAGGACAGCAGCCCAGCATCATCCA +
Preference number: 5 (lower is better)
Translates to: CPQSACACNFESSPV*ARKTWRRTAAQHHP
Trigger: TGGATGATGCTGGGCTGCTGTCCTTCGCCACGTTTTCCTGGCTCACACCGGTGATGATTCGAAGTTACAAGCACACGCTGACTGTGGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000080115.10
ENSMUST00000129898.8
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000152438.2
ENSMUST00000156610.8
CDS GCA 90 bp TTTCGAAGATTAGCGTGGAGAGGGCCACCTTCAGTCGGATCGCTGTaGGGTAATTTATGGCCCAGGCAAGGGCCCAAAAGAGGACTTTGG +
Preference number: 5 (lower is better)
Translates to: FRRLAWRGPPSVGSL*GNLWPRQGPKRGLW
Trigger: CCAAAGTCCTCTTTTGGGCCCTTGCCTGGGCCATAAATTACCGCACAGCGATCCGACTGAAGGTGGCCCTCTCCACGCTAATCTTCGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000080115.10
ENSMUST00000129898.8
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000152438.2
ENSMUST00000156610.8
CDS-3UTR CAA 90 bp GAACCAACCCTGAGTCTGCCAAGAGAGATGGCCAGAAGAACAAGGGACACATCTGCATCATCCACAGGATaGGGTGCCAACCTTGCACGG +
Preference number: 5 (lower is better)
Translates to: EPTLSLPREMARRTRDTSASSTG*GANLAR
Trigger: CCGTGCAAGGTTGGCACCCAATCCTGTGGATGATGC...AGATGTGTCCCTTGTTCTTCTGGCCATCTCTCTTGGCAGACTCAGGGTTGGTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR CAA 90 bp GATGATTTTCCGGAGCCCGTCCTTCCCACAATCCCAACTGTCTGCCCGCTTTGGACGATGCACAGGATGTaGGCTACAACGTCCATCAGA +
Preference number: 5 (lower is better)
Translates to: DDFPEPVLPTIPTVCPLWTMHRM*ATTSIR
Trigger: TCTGATGGACGTTGTAGCCAACATCCTGTGCATCGT...CCAAAGCGGGCAGACAGTTGGGATTGTGGGAAGGACGGGCTCCGGAAAATCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000129898.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR CAA 90 bp AGAACAAGGGACACATCTCAGCCCCAGCTCACCATGTGCTCCATGGGTGGGAGGAATGTGCTGGAGGATTaGGTGAATGAGAACTGTCGG +
Preference number: 5 (lower is better)
Translates to: RTRDTSQPQLTMCSMGGRNVLED*VNENCR
Trigger: CCGACAGTTCTCATTCACCAAATCCTCCAGCACATT...CCTCCCACCCATGGAGCACATGGTGAGCTGGGGCTGAGATGTGTCCCTTGTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR CAA 90 bp ATGGCCAGAAGAACAAGGGACACATCTCAGCCCCAGCTCACCATGTGCTCCATGGCTTCGGCCACTGCTTaGACCGAGAAAGGCAAGATT +
Preference number: 5 (lower is better)
Translates to: MARRTRDTSQPQLTMCSMASATA*TEKGKI
Trigger: AATCTTGCCTTTCTCGGTCAAAGCAGTGGCCGAAGC...CATGGAGCACATGGTGAGCTGGGGCTGAGATGTGTCCCTTGTTCTTCTGGCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR CAA 90 bp AGGACACGTGAGGGACCCTTGGGGTTTTCAGAAGTGAGAGGCAGCTTCCAACCTATCTGGGTCTTCAGGTaGAGTGATGTAGGATGGGGG +
Preference number: 5 (lower is better)
Translates to: RTREGPLGFSEVRGSFQPIWVFR*SDVGWG
Trigger: CCCCCATCCTACATCACTCAACCTGAAGACCCAGAT...AGGTTGGAAGCTGCCTCTCACTTCTGAAAACCCCAAGGGTCCCTCACGTGTCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR CAA 90 bp CTGTGGCCAGGGCTGCTTGGCTCCATGGTCGGGCTTCTGTTCTCACATGTCCATACCACAAAACTGATGTaGTGTAGCACTGACTTGGGG +
Preference number: 5 (lower is better)
Translates to: LWPGLLGSMVGLLFSHVHTTKLM*CSTDLG
Trigger: CCCCAAGTCAGTGCTACACAACATCAGTTTTGTGGT...ATGGACATGTGAGAACAGAAGCCCGACCATGGAGCCAAGCAGCCCTGGCCACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080115.10
ENSMUST00000129898.8
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR CAA 90 bp GAAGAACAAGGGACACATCTCAGCCCCAGCTCACCATGTGCTCCATGGGTGGGATCTTCCATCAACTCCTaGTGGGTGCCCTTTTCACAG +
Preference number: 5 (lower is better)
Translates to: EEQGTHLSPSSPCAPWVGSSINS*WVPFSQ
Trigger: CTGTGAAAAGGGCACCCACAAGGAGTTGATGGAAGA...TCCCACCCATGGAGCACATGGTGAGCTGGGGCTGAGATGTGTCCCTTGTTCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000131806.8
CDS-3UTR CAA 90 bp GCCAGAAGAACAAGGGACACATCTCAGCCCCAGCTCACCATGTGCTCCATGGGTTGTTCGCACACACACTaGAAGCAATCCACTGAGCTG +
Preference number: 5 (lower is better)
Translates to: ARRTRDTSQPQLTMCSMGCSHTH*KQSTEL
Trigger: CAGCTCAGTGGATTGCTTCAAGTGTGTGTGCGAACA...ACCCATGGAGCACATGGTGAGCTGGGGCTGAGATGTGTCCCTTGTTCTTCTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000156066.8
CDS-3UTR CAA 90 bp CCATCCAGAACCAACCCTGAGTCTGCCAAGAGAGATGGCCAGAAGAACAAGGGAGGAGGTGAACTTGGCTaGGGTCTCTGTTCCTGTTCG +
Preference number: 5 (lower is better)
Translates to: PSRTNPESAKRDGQKNKGGGELG*GLCSCS
Trigger: CGAACAGGAACAGAGACCCAAGCCAAGTTCACCTCC...TCCCTTGTTCTTCTGGCCATCTCTCTTGGCAGACTCAGGGTTGGTTCTGGATGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000156066.8
CDS-3UTR CAA 90 bp CCATCCAGAACCAACCCTGAGTCTGCCAAGAGAGATGGCCAGAAGAACAAGGGATCTGCGGAGGTGAACTaGGCTTGGGTCTCTGTTCCT +
Preference number: 5 (lower is better)
Translates to: PSRTNPESAKRDGQKNKGSAEVN*AWVSVP
Trigger: AGGAACAGAGACCCAAGCCAAGTTCACCTCCGCAGA...TCCCTTGTTCTTCTGGCCATCTCTCTTGGCAGACTCAGGGTTGGTTCTGGATGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000156066.8
CDS-3UTR CAA 90 bp GTATTGGTGAGGACACGTGAGGGACCCTTGGGGTTTTCAGAAGTGAGAGGCAGCAACTGTCTGCCCGCTTaGGATGTTCAAGTTCAGGCC +
Preference number: 5 (lower is better)
Translates to: VLVRTREGPLGFSEVRGSNCLPA*DVQVQA
Trigger: GGCCTGAACTTGAACATCCAAAGCGGGCAGACAGTT...GCTGCCTCTCACTTCTGAAAACCCCAAGGGTCCCTCACGTGTCCTCACCAATAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000156066.8
CDS-3UTR CAA 90 bp GAACAAGGGACACATCTCAGCCCCAGCTCACCATGTGCTCCATGGGTGGGAGGGCTTCGGAAAGTTGAGTaGAGTTTGGCCATAAACATC +
Preference number: 5 (lower is better)
Translates to: EQGTHLSPSSPCAPWVGGLRKVE*SLAINI
Trigger: GATGTTTATGGCCAAACTCAACTCAACTTTCCGAAG...CCCTCCCACCCATGGAGCACATGGTGAGCTGGGGCTGAGATGTGTCCCTTGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR CAA 90 bp CTGCCAAGAGAGATGGCCAGAAGAACAAGGGACACATCTCAGCCCCAGCTCACCATGGAAGATCCATGCTaGCTGGGAAACGTAAGCCAA +
Preference number: 5 (lower is better)
Translates to: LPREMARRTRDTSQPQLTMEDPC*LGNVSQ
Trigger: TTGGCTTACGTTTCCCAGCAAGCATGGATCTTCCAT...GGTGAGCTGGGGCTGAGATGTGTCCCTTGTTCTTCTGGCCATCTCTCTTGGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR CAA 90 bp GAAGAACAAGGGACACATCTCAGCCCCAGCTCACCATGTGCTCCATGGGTGGGAATGGAAGATCCATGCTaGCTGGGAAACGTAAGCCAA +
Preference number: 5 (lower is better)
Translates to: EEQGTHLSPSSPCAPWVGMEDPC*LGNVSQ
Trigger: TTGGCTTACGTTTCCCAGCAAGCATGGATCTTCCAT...TCCCACCCATGGAGCACATGGTGAGCTGGGGCTGAGATGTGTCCCTTGTTCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR CAA 90 bp TGCCAAGAGAGATGGCCAGAAGAACAAGGGACACATCTCAGCCCCAGCTCACCATCTTCCATCAACTCCTaGTGGGTGCCCTTTTCACAG +
Preference number: 5 (lower is better)
Translates to: CQERWPEEQGTHLSPSSPSSINS*WVPFSQ
Trigger: CTGTGAAAAGGGCACCCACAAGGAGTTGATGGAAGA...TGGTGAGCTGGGGCTGAGATGTGTCCCTTGTTCTTCTGGCCATCTCTCTTGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000131806.8
CDS-3UTR CAA 90 bp CAACCTACCAGCTTTGTCTGCACTCTTCACCATCCAGAACCAACCCTGAGTCTGCTCTGGATCCTTGAATaGCAGTCCCCGGAGGTTGTG +
Preference number: 5 (lower is better)
Translates to: QPTSFVCTLHHPEPTLSLLWILE*QSPEVV
Trigger: CACAACCTCCGGGGACTGCAATTCAAGGATCCAGAG...CAGACTCAGGGTTGGTTCTGGATGGTGAAGAGTGCAGACAAAGCTGGTAGGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000131806.8
CDS-3UTR CAA 90 bp TCTTCACCATCCAGAACCAACCCTGAGTCTGCCAAGAGAGATGGCCAGAAGAACCTCTGGATCCTTGAATaGCAGTCCCCGGAGGTTGTG +
Preference number: 5 (lower is better)
Translates to: SSPSRTNPESAKRDGQKNLWILE*QSPEVV
Trigger: CACAACCTCCGGGGACTGCAATTCAAGGATCCAGAG...GTTCTTCTGGCCATCTCTCTTGGCAGACTCAGGGTTGGTTCTGGATGGTGAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000131806.8
CDS-3UTR CAA 90 bp ACCAGCTTTGTCTGCACTCTTCACCATCCAGAACCAACCCTGAGTCTGCCAAGACTCTGGATCCTTGAATaGCAGTCCCCGGAGGTTGTG +
Preference number: 5 (lower is better)
Translates to: TSFVCTLHHPEPTLSLPRLWILE*QSPEVV
Trigger: CACAACCTCCGGGGACTGCAATTCAAGGATCCAGAG...TCTTGGCAGACTCAGGGTTGGTTCTGGATGGTGAAGAGTGCAGACAAAGCTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000131806.8
CDS-3UTR CAA 90 bp TCTTCACCATCCAGAACCAACCCTGAGTCTGCCAAGAGAGATGGCCAGAAGAACATGTGCTCTGGATCCTaGAATTGCAGTCCCCGGAGG +
Preference number: 5 (lower is better)
Translates to: SSPSRTNPESAKRDGQKNMCSGS*NCSPRR
Trigger: CCTCCGGGGACTGCAATTCAAGGATCCAGAGCACAT...GTTCTTCTGGCCATCTCTCTTGGCAGACTCAGGGTTGGTTCTGGATGGTGAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000131806.8
CDS-3UTR CAA 90 bp CCAACCCTGAGTCTGCCAAGAGAGATGGCCAGAAGAACAAGGGACACATCTCAGAGGGTCTGGTCGACGTaGCAGGCTGTCTTATTGTTC +
Preference number: 5 (lower is better)
Translates to: PTLSLPREMARRTRDTSQRVWST*QAVLLF
Trigger: GAACAATAAGACAGCCTGCAACGTCGACCAGACCCT...CTGAGATGTGTCCCTTGTTCTTCTGGCCATCTCTCTTGGCAGACTCAGGGTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000156066.8
CDS-3UTR CAA 90 bp ACTCTTCACCATCCAGAACCAACCCTGAGTCTGCCAAGAGAGATGGCCAGAAGAGGAGGTGAACTTGGCTaGGGTCTCTGTTCCTGTTCG +
Preference number: 5 (lower is better)
Translates to: TLHHPEPTLSLPREMARRGGELG*GLCSCS
Trigger: CGAACAGGAACAGAGACCCAAGCCAAGTTCACCTCC...TCTTCTGGCCATCTCTCTTGGCAGACTCAGGGTTGGTTCTGGATGGTGAAGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000156066.8
CDS-3UTR CAA 90 bp AGAGGCAGCTTCCAACCTACCAGCTTTGTCTGCACTCTTCACCATCCAGAACCAGGGATCATGGTCAGCTaGGTTCGGAGGTCTTCCAGA +
Preference number: 5 (lower is better)
Translates to: RGSFQPTSFVCTLHHPEPGIMVS*VRRSSR
Trigger: TCTGGAAGACCTCCGAACCAAGCTGACCATGATCCC...TGGTTCTGGATGGTGAAGAGTGCAGACAAAGCTGGTAGGTTGGAAGCTGCCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000156066.8
CDS-3UTR CAA 90 bp CAACCTACCAGCTTTGTCTGCACTCTTCACCATCCAGAACCAACCCTGAGTCTGGGGATCATGGTCAGCTaGGTTCGGAGGTCTTCCAGA +
Preference number: 5 (lower is better)
Translates to: QPTSFVCTLHHPEPTLSLGIMVS*VRRSSR
Trigger: TCTGGAAGACCTCCGAACCAAGCTGACCATGATCCC...CAGACTCAGGGTTGGTTCTGGATGGTGAAGAGTGCAGACAAAGCTGGTAGGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000156066.8
CDS-3UTR CAA 90 bp GTATTGGTGAGGACACGTGAGGGACCCTTGGGGTTTTCAGAAGTGAGAGGCAGCACAAGGGTGTCTGTCTaGGAATCCATGGAGGCAGTA +
Preference number: 5 (lower is better)
Translates to: VLVRTREGPLGFSEVRGSTRVSV*ESMEAV
Trigger: TACTGCCTCCATGGATTCCAAGACAGACACCCTTGT...GCTGCCTCTCACTTCTGAAAACCCCAAGGGTCCCTCACGTGTCCTCACCAATAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
CDS TCA 90 bp TTCTTCTTCCCAAAGGATCTGGAATCTCTTGGCGTTGATGTCCGATaGGTCATAAGGAGACAGTGGGGGCAGGGTGTCCACAGTCAGCGT +
Preference number: 5 (lower is better)
Translates to: FFFPKDLESLGVDVR*VIRRQWGQGVHSQR
Trigger: ACGCTGACTGTGGACACCCTGCCCCCACTGTCTCCTTATGACTCATCGGACATCAACGCCAAGAGATTCCAGATCCTTTGGGAAGAAGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000080115.10
ENSMUST00000129898.8
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000152438.2
ENSMUST00000156610.8
CDS-3UTR CAA 90 bp ATGGCCAGAAGAACAAGGGACACATCTCAGCCCCAGCTCACCATGTGCTCCATGAATGTGCTGGAGGATTaGGTGAATGAGAACTGTCGG +
Preference number: 5 (lower is better)
Translates to: MARRTRDTSQPQLTMCSMNVLED*VNENCR
Trigger: CCGACAGTTCTCATTCACCAAATCCTCCAGCACATT...CATGGAGCACATGGTGAGCTGGGGCTGAGATGTGTCCCTTGTTCTTCTGGCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR CAA 90 bp GAAGAACAAGGGACACATCTCAGCCCCAGCTCACCATGTGCTCCATGGGTGGGATGTCTGTCACTGAAATaGCTGACCTTCGGAAAGTTG +
Preference number: 5 (lower is better)
Translates to: EEQGTHLSPSSPCAPWVGCLSLK*LTFGKL
Trigger: CAACTTTCCGAAGGTCAGCAATTTCAGTGACAGACA...TCCCACCCATGGAGCACATGGTGAGCTGGGGCTGAGATGTGTCCCTTGTTCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR CAA 90 bp GTTGCAGGCTGTCTTATTGTTCTGGGATGCACAGACGACCTGGGAACCCCTGTCACCACAAAACTGATGTaGTGTAGCACTGACTTGGGG +
Preference number: 5 (lower is better)
Translates to: VAGCLIVLGCTDDLGTPVTTKLM*CSTDLG
Trigger: CCCCAAGTCAGTGCTACACAACATCAGTTTTGTGGT...GACAGGGGTTCCCAGGTCGTCTGTGCATCCCAGAACAATAAGACAGCCTGCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000129898.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR CAA 90 bp CTCTATGCAGACAGGGGATGCCTAGCATGTACTCCCAGGTACACAGCCAAGGGAATGGAAGATCCATGCTaGCTGGGAAACGTAAGCCAA +
Preference number: 5 (lower is better)
Translates to: LYADRGCLACTPRYTAKGMEDPC*LGNVSQ
Trigger: TTGGCTTACGTTTCCCAGCAAGCATGGATCTTCCAT...TCCCTTGGCTGTGTACCTGGGAGTACATGCTAGGCATCCCCTGTCTGCATAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000152438.2
CDS-3UTR CAA 90 bp CAACCTACCAGCTTTGTCTGCACTCTTCACCATCCAGAACCAACCCTGAGTCTGAGGGTCTGGTCGACGTaGCAGGCTGTCTTATTGTTC +
Preference number: 5 (lower is better)
Translates to: QPTSFVCTLHHPEPTLSLRVWST*QAVLLF
Trigger: GAACAATAAGACAGCCTGCAACGTCGACCAGACCCT...CAGACTCAGGGTTGGTTCTGGATGGTGAAGAGTGCAGACAAAGCTGGTAGGTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000156066.8
CDS-3UTR CAA 90 bp AGAACAAGGGACACATCTCAGCCCCAGCTCACCATGTGCTCCATGGGTGGGAGGTTGAGTGTCTTAAACTaGCTGATGCAGTCGTCCTTT +
Preference number: 5 (lower is better)
Translates to: RTRDTSQPQLTMCSMGGRLSVLN*LMQSSF
Trigger: AAAGGACGACTGCATCAGCAAGTTTAAGACACTCAA...CCTCCCACCCATGGAGCACATGGTGAGCTGGGGCTGAGATGTGTCCCTTGTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000156066.8
CDS-3UTR CAA 90 bp CCAAGAGAGATGGCCAGAAGAACAAGGGACACATCTCAGCCCCAGCTCACCATGGACAATGACAAGCCTTaGGATGAGGCGCTGATTGAA +
Preference number: 5 (lower is better)
Translates to: PREMARRTRDTSQPQLTMDNDKP*DEALIE
Trigger: TTCAATCAGCGCCTCATCCAAAGGCTTGTCATTGTC...CATGGTGAGCTGGGGCTGAGATGTGTCCCTTGTTCTTCTGGCCATCTCTCTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000156066.8
CDS-3UTR CAA 90 bp GGCAGCTTCCAACCTACCAGCTTTGTCTGCACTCTTCACCATCCAGAACCAACCAGAACGAGAGGGGTGTaGTCTCTGTATCTCATCCGA +
Preference number: 5 (lower is better)
Translates to: GSFQPTSFVCTLHHPEPTRTRGV*SLYLIR
Trigger: TCGGATGAGATACAGAGACAACACCCCTCTCGTTCT...GGTTGGTTCTGGATGGTGAAGAGTGCAGACAAAGCTGGTAGGTTGGAAGCTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000156066.8
CDS-3UTR CAA 90 bp ACTCTTCACCATCCAGAACCAACCCTGAGTCTGCCAAGAGAGATGGCCAGAAGAAACTGTCTGCCCGCTTaGGATGTTCAAGTTCAGGCC +
Preference number: 5 (lower is better)
Translates to: TLHHPEPTLSLPREMARRNCLPA*DVQVQA
Trigger: GGCCTGAACTTGAACATCCAAAGCGGGCAGACAGTT...TCTTCTGGCCATCTCTCTTGGCAGACTCAGGGTTGGTTCTGGATGGTGAAGAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000156066.8
CDS-3UTR CAA 90 bp CACCATCCAGAACCAACCCTGAGTCTGCCAAGAGAGATGGCCAGAAGAACAAGGGCGAGGACTTCAGGCTaGTCAAACTCAATCACCTTC +
Preference number: 5 (lower is better)
Translates to: HHPEPTLSLPREMARRTRARTSG*SNSITF
Trigger: GAAGGTGATTGAGTTTGACAAGCCTGAAGTCCTCGC...CCTTGTTCTTCTGGCCATCTCTCTTGGCAGACTCAGGGTTGGTTCTGGATGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
CDS TCA 90 bp CCACGACCCCTTTCTGTAACTGCATCTGTCCTAGGAGAGCTGAAATaGGGGAACTCTTCCCGCTTCCAACATTCCCGCATATTCCCAAGA +
Preference number: 5 (lower is better)
Translates to: PRPLSVTASVLGELK*GNSSRFQHSRIFPR
Trigger: TCTTGGGAATATGCGGGAATGTTGGAAGCGGGAAGAGTTCCCTCATTTCAGCTCTCCTAGGACAGATGCAGTTACAGAAAGGGGTCGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000080115.10
ENSMUST00000129898.8
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000152438.2
ENSMUST00000156610.8
CDS TCA 90 bp CATGGAAGATCCATGCTTGCTGGGAAACGTAAGCCAAAGGTCCATTaGCAGCCACGACCCCTTTCTGTAACTGCATCTGTCCTAGGAGAG +
Preference number: 5 (lower is better)
Translates to: HGRSMLAGKRKPKVH*QPRPLSVTASVLGE
Trigger: CTCTCCTAGGACAGATGCAGTTACAGAAAGGGGTCGTGGCTGTCAATGGACCTTTGGCTTACGTTTCCCAGCAAGCATGGATCTTCCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000080115.10
ENSMUST00000129898.8
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000152438.2
ENSMUST00000156610.8
CDS-3UTR CAA 90 bp CCAACCCTGAGTCTGCCAAGAGAGATGGCCAGAAGAACAAGGGACACATCTCAGAATGTGCTGGAGGATTaGGTGAATGAGAACTGTCGG +
Preference number: 5 (lower is better)
Translates to: PTLSLPREMARRTRDTSQNVLED*VNENCR
Trigger: CCGACAGTTCTCATTCACCAAATCCTCCAGCACATT...CTGAGATGTGTCCCTTGTTCTTCTGGCCATCTCTCTTGGCAGACTCAGGGTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR CAA 90 bp AGGGCTGCTTGGCTCCATGGTCGGGCTTCTGTTCTCACATGTCCATCGCCTCCTAAAGTTGAGTTGAGTTaGGCCATAAACATCTGGATC +
Preference number: 5 (lower is better)
Translates to: RAAWLHGRASVLTCPSPPKVELS*AINIWI
Trigger: GATCCAGATGTTTATGGCCAAACTCAACTCAACTTT...AGGAGGCGATGGACATGTGAGAACAGAAGCCCGACCATGGAGCCAAGCAGCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080115.10
ENSMUST00000129898.8
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR CAA 90 bp GGCCAGAAGAACAAGGGACACATCTCAGCCCCAGCTCACCATGTGCTCCATGGGAAAGTTGAGTTGAGTTaGGCCATAAACATCTGGATC +
Preference number: 5 (lower is better)
Translates to: GQKNKGHISAPAHHVLHGKVELS*AINIWI
Trigger: GATCCAGATGTTTATGGCCAAACTCAACTCAACTTT...CCCATGGAGCACATGGTGAGCTGGGGCTGAGATGTGTCCCTTGTTCTTCTGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR CAA 90 bp AGAAGAACAAGGGACACATCTCAGCCCCAGCTCACCATGTGCTCCATGGGTGGGCTTCGGAAAGTTGAGTaGAGTTTGGCCATAAACATC +
Preference number: 5 (lower is better)
Translates to: RRTRDTSQPQLTMCSMGGLRKVE*SLAINI
Trigger: GATGTTTATGGCCAAACTCAACTCAACTTTCCGAAG...CCCACCCATGGAGCACATGGTGAGCTGGGGCTGAGATGTGTCCCTTGTTCTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR CAA 90 bp CTCTATGCAGACAGGGGATGCCTAGCATGTACTCCCAGGTACACAGCCAAGGGATGTCTGTCACTGAAATaGCTGACCTTCGGAAAGTTG +
Preference number: 5 (lower is better)
Translates to: LYADRGCLACTPRYTAKGCLSLK*LTFGKL
Trigger: CAACTTTCCGAAGGTCAGCAATTTCAGTGACAGACA...TCCCTTGGCTGTGTACCTGGGAGTACATGCTAGGCATCCCCTGTCTGCATAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000152438.2
CDS-3UTR CAA 90 bp GGCCAGAAGAACAAGGGACACATCTCAGCCCCAGCTCACCATGTGCTCCATGGGCCGAGAAAGGCAAGATaGCAATGGAAAACTTCATTA +
Preference number: 5 (lower is better)
Translates to: GQKNKGHISAPAHHVLHGPRKAR*QWKTSL
Trigger: TAATGAAGTTTTCCATTGCAATCTTGCCTTTCTCGG...CCCATGGAGCACATGGTGAGCTGGGGCTGAGATGTGTCCCTTGTTCTTCTGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR CAA 90 bp TTCCAACCTACCAGCTTTGTCTGCACTCTTCACCATCCAGAACCAACCCTGAGTGCTTCGGCCACTGCTTaGACCGAGAAAGGCAAGATT +
Preference number: 5 (lower is better)
Translates to: FQPTSFVCTLHHPEPTLSASATA*TEKGKI
Trigger: AATCTTGCCTTTCTCGGTCAAAGCAGTGGCCGAAGC...ACTCAGGGTTGGTTCTGGATGGTGAAGAGTGCAGACAAAGCTGGTAGGTTGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR CAA 90 bp CAAGAGAGATGGCCAGAAGAACAAGGGACACATCTCAGCCCCAGCTCACCATGTACCACAAAACTGATGTaGTGTAGCACTGACTTGGGG +
Preference number: 5 (lower is better)
Translates to: QERWPEEQGTHLSPSSPCTTKLM*CSTDLG
Trigger: CCCCAAGTCAGTGCTACACAACATCAGTTTTGTGGT...ACATGGTGAGCTGGGGCTGAGATGTGTCCCTTGTTCTTCTGGCCATCTCTCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR CAA 90 bp CAGGACAAGGTCACAGTTGAGAACGGTGTTCAGGCGATGAGCGATGGTCAACACACCACAAAACTGATGTaGTGTAGCACTGACTTGGGG +
Preference number: 5 (lower is better)
Translates to: QDKVTVENGVQAMSDGQHTTKLM*CSTDLG
Trigger: CCCCAAGTCAGTGCTACACAACATCAGTTTTGTGGT...GTGTTGACCATCGCTCATCGCCTGAACACCGTTCTCAACTGTGACCTTGTCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000129898.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR CAA 90 bp GCAGACAGGGGATGCCTAGCATGTACTCCCAGGTACACAGCCAAGGGAAAAGATACCACAAAACTGATGTaGTGTAGCACTGACTTGGGG +
Preference number: 5 (lower is better)
Translates to: ADRGCLACTPRYTAKGKDTTKLM*CSTDLG
Trigger: CCCCAAGTCAGTGCTACACAACATCAGTTTTGTGGT...ATCTTTTCCCTTGGCTGTGTACCTGGGAGTACATGCTAGGCATCCCCTGTCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000152438.2
CDS-3UTR CAA 90 bp ATGGCCAGAAGAACAAGGGACACATCTCAGCCCCAGCTCACCATGTGCTCCATGGACATGAACTGTGTGTaGGTACCTTTGGTGGTTGTA +
Preference number: 5 (lower is better)
Translates to: MARRTRDTSQPQLTMCSMDMNCV*VPLVVV
Trigger: TACAACCACCAAAGGTACCAACACACAGTTCATGTC...CATGGAGCACATGGTGAGCTGGGGCTGAGATGTGTCCCTTGTTCTTCTGGCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR CAA 90 bp AACTGTCTGCCCGCTTTGGATGTTCAAGTTCAGGCCATCAAGAACGAGAGGGGTTCTTCCATCAACTCCTaGTGGGTGCCCTTTTCACAG +
Preference number: 5 (lower is better)
Translates to: NCLPALDVQVQAIKNERGSSINS*WVPFSQ
Trigger: CTGTGAAAAGGGCACCCACAAGGAGTTGATGGAAGA...ACCCCTCTCGTTCTTGATGGCCTGAACTTGAACATCCAAAGCGGGCAGACAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000129898.8
ENSMUST00000131806.8
CDS-3UTR CAA 90 bp AGGAGAGGATGCTGCCCTCATTTAGAGTGGGTTTTCCTTGTTGGCAACTGTATCCTCTGGATCCTTGAATaGCAGTCCCCGGAGGTTGTG +
Preference number: 5 (lower is better)
Translates to: RRGCCPHLEWVFLVGNCILWILE*QSPEVV
Trigger: CACAACCTCCGGGGACTGCAATTCAAGGATCCAGAG...GATACAGTTGCCAACAAGGAAAACCCACTCTAAATGAGGGCAGCATCCTCTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000152438.2
CDS-3UTR CAA 90 bp CTCAGACATTATGTAGTATTGGTGAGGACACGTGAGGGACCCTTGGGGTTTTCAATGTGCTCTGGATCCTaGAATTGCAGTCCCCGGAGG +
Preference number: 5 (lower is better)
Translates to: LRHYVVLVRTREGPLGFSMCSGS*NCSPRR
Trigger: CCTCCGGGGACTGCAATTCAAGGATCCAGAGCACAT...TGAAAACCCCAAGGGTCCCTCACGTGTCCTCACCAATACTACATAATGTCTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000131806.8
CDS-3UTR CAA 90 bp TTTGAATTACGGAGAAGTGCCCGGGCCATACAAAGCAGCTGGCGTTCTCCTACTTTGCAGGCTGTCTTATaGTTCTGGGATGCACAGACG +
Preference number: 5 (lower is better)
Translates to: FELRRSARAIQSSWRSPTLQAVL*FWDAQT
Trigger: CGTCTGTGCATCCCAGAACAATAAGACAGCCTGCAA...AGTAGGAGAACGCCAGCTGCTTTGTATGGCCCGGGCACTTCTCCGTAATTCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156066.8
CDS-3UTR CAA 90 bp CTGCCAAGAGAGATGGCCAGAAGAACAAGGGACACATCTCAGCCCCAGCTCACCTTGAGTGTCTTAAACTaGCTGATGCAGTCGTCCTTT +
Preference number: 5 (lower is better)
Translates to: LPREMARRTRDTSQPQLTLSVLN*LMQSSF
Trigger: AAAGGACGACTGCATCAGCAAGTTTAAGACACTCAA...GGTGAGCTGGGGCTGAGATGTGTCCCTTGTTCTTCTGGCCATCTCTCTTGGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000156066.8
CDS-3UTR CAA 90 bp CCATCCAGAACCAACCCTGAGTCTGCCAAGAGAGATGGCCAGAAGAACAAGGGAGACAATGACAAGCCTTaGGATGAGGCGCTGATTGAA +
Preference number: 5 (lower is better)
Translates to: PSRTNPESAKRDGQKNKGDNDKP*DEALIE
Trigger: TTCAATCAGCGCCTCATCCAAAGGCTTGTCATTGTC...TCCCTTGTTCTTCTGGCCATCTCTCTTGGCAGACTCAGGGTTGGTTCTGGATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000156066.8
CDS-3UTR CAA 90 bp TCTTCACCATCCAGAACCAACCCTGAGTCTGCCAAGAGAGATGGCCAGAAGAACGCGAGGACTTCAGGCTaGTCAAACTCAATCACCTTC +
Preference number: 5 (lower is better)
Translates to: SSPSRTNPESAKRDGQKNARTSG*SNSITF
Trigger: GAAGGTGATTGAGTTTGACAAGCCTGAAGTCCTCGC...GTTCTTCTGGCCATCTCTCTTGGCAGACTCAGGGTTGGTTCTGGATGGTGAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
CDS TCA 90 bp CCCTCTTTATTTCTTCTTCCCAAAGGATCTGGAATCTCTTGGCGTTaGTGTCCGATGAGTCATAAGGAGACAGTGGGGGCAGGGTGTCCA +
Preference number: 5 (lower is better)
Translates to: PSLFLLPKGSGISWR*CPMSHKETVGAGCP
Trigger: TGGACACCCTGCCCCCACTGTCTCCTTATGACTCATCGGACATCAACGCCAAGAGATTCCAGATCCTTTGGGAAGAAGAAATAAAGAGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000080115.10
ENSMUST00000129898.8
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000152438.2
ENSMUST00000156610.8
CDS-3UTR CAA 90 bp AATCCCAACTGTCTGCCCGCTTTGGATGTTCAAGTTCAGGCCATCAAGAACGAGACGATGCACAGGATGTaGGCTACAACGTCCATCAGA +
Preference number: 5 (lower is better)
Translates to: NPNCLPALDVQVQAIKNETMHRM*ATTSIR
Trigger: TCTGATGGACGTTGTAGCCAACATCCTGTGCATCGT...CTCGTTCTTGATGGCCTGAACTTGAACATCCAAAGCGGGCAGACAGTTGGGATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000129898.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR CAA 90 bp CAACTCAGGAGAGGATGCTGCCCTCATTTAGAGTGGGTTTTCCTTGTTGGCAACACGATGCACAGGATGTaGGCTACAACGTCCATCAGA +
Preference number: 5 (lower is better)
Translates to: QLRRGCCPHLEWVFLVGNTMHRM*ATTSIR
Trigger: TCTGATGGACGTTGTAGCCAACATCCTGTGCATCGT...GTTGCCAACAAGGAAAACCCACTCTAAATGAGGGCAGCATCCTCTCCTGAGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000152438.2
CDS-3UTR CAA 90 bp GTCGACGTTGCAGGCTGTCTTATTGTTCTGGGATGCACAGACGACCTGGGAACCCTTCGGAAAGTTGAGTaGAGTTTGGCCATAAACATC +
Preference number: 5 (lower is better)
Translates to: VDVAGCLIVLGCTDDLGTLRKVE*SLAINI
Trigger: GATGTTTATGGCCAAACTCAACTCAACTTTCCGAAG...GGTTCCCAGGTCGTCTGTGCATCCCAGAACAATAAGACAGCCTGCAACGTCGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000129898.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR CAA 90 bp TCTGTATCTCATCCGATAGTCCTTGAACGTTATCTCCCCTCGGCTCGGCCAGTCTGTCTGTCACTGAAATaGCTGACCTTCGGAAAGTTG +
Preference number: 5 (lower is better)
Translates to: SVSHPIVLERYLPSARPVCLSLK*LTFGKL
Trigger: CAACTTTCCGAAGGTCAGCAATTTCAGTGACAGACA...GACTGGCCGAGCCGAGGGGAGATAACGTTCAAGGACTATCGGATGAGATACAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000129898.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR CAA 90 bp CCATCCAGAACCAACCCTGAGTCTGCCAAGAGAGATGGCCAGAAGAACAAGGGATGTCTGTCACTGAAATaGCTGACCTTCGGAAAGTTG +
Preference number: 5 (lower is better)
Translates to: PSRTNPESAKRDGQKNKGCLSLK*LTFGKL
Trigger: CAACTTTCCGAAGGTCAGCAATTTCAGTGACAGACA...TCCCTTGTTCTTCTGGCCATCTCTCTTGGCAGACTCAGGGTTGGTTCTGGATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR CAA 90 bp CCAAGAGAGATGGCCAGAAGAACAAGGGACACATCTCAGCCCCAGCTCACCATGTCAGAAACTCATTCATaGTCTGAACCCGTTTGTCTG +
Preference number: 5 (lower is better)
Translates to: PREMARRTRDTSQPQLTMSETHS*SEPVCL
Trigger: CAGACAAACGGGTTCAGACAATGAATGAGTTTCTGA...CATGGTGAGCTGGGGCTGAGATGTGTCCCTTGTTCTTCTGGCCATCTCTCTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR CAA 90 bp TCAGGAAGAAGAGACACAAAACCAGGAAGGAGACCAGGTACCCTCCAGAAGCCTATGGAAGATCCATGCTaGCTGGGAAACGTAAGCCAA +
Preference number: 5 (lower is better)
Translates to: SGRRDTKPGRRPGTLQKPMEDPC*LGNVSQ
Trigger: TTGGCTTACGTTTCCCAGCAAGCATGGATCTTCCAT...AGGCTTCTGGAGGGTACCTGGTCTCCTTCCTGGTTTTGTGTCTCTTCTTCCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000129898.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR CAA 90 bp CACCATCCAGAACCAACCCTGAGTCTGCCAAGAGAGATGGCCAGAAGAACAAGGGACATGAACTGTGTGTaGGTACCTTTGGTGGTTGTA +
Preference number: 5 (lower is better)
Translates to: HHPEPTLSLPREMARRTRDMNCV*VPLVVV
Trigger: TACAACCACCAAAGGTACCAACACACAGTTCATGTC...CCTTGTTCTTCTGGCCATCTCTCTTGGCAGACTCAGGGTTGGTTCTGGATGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR CAA 90 bp GGCAGCTTCCAACCTACCAGCTTTGTCTGCACTCTTCACCATCCAGAACCAACCGACATGAACTGTGTGTaGGTACCTTTGGTGGTTGTA +
Preference number: 5 (lower is better)
Translates to: GSFQPTSFVCTLHHPEPTDMNCV*VPLVVV
Trigger: TACAACCACCAAAGGTACCAACACACAGTTCATGTC...GGTTGGTTCTGGATGGTGAAGAGTGCAGACAAAGCTGGTAGGTTGGAAGCTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR CAA 90 bp GGCAACTGTATCTGGGAATGTTCTCAGAAAGAACCCAGTAGAGGGTTTAGACCTATGTGCTCTGGATCCTaGAATTGCAGTCCCCGGAGG +
Preference number: 5 (lower is better)
Translates to: GNCIWECSQKEPSRGFRPMCSGS*NCSPRR
Trigger: CCTCCGGGGACTGCAATTCAAGGATCCAGAGCACAT...AGGTCTAAACCCTCTACTGGGTTCTTTCTGAGAACATTCCCAGATACAGTTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000152438.2
CDS-3UTR CAA 90 bp TTCCAACCTACCAGCTTTGTCTGCACTCTTCACCATCCAGAACCAACCCTGAGTTTGCAGGCTGTCTTATaGTTCTGGGATGCACAGACG +
Preference number: 5 (lower is better)
Translates to: FQPTSFVCTLHHPEPTLSLQAVL*FWDAQT
Trigger: CGTCTGTGCATCCCAGAACAATAAGACAGCCTGCAA...ACTCAGGGTTGGTTCTGGATGGTGAAGAGTGCAGACAAAGCTGGTAGGTTGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000156066.8
CDS-3UTR CAA 90 bp GTATTGGTGAGGACACGTGAGGGACCCTTGGGGTTTTCAGAAGTGAGAGGCAGCGTGAAGGTAAAGCCTTaGATGATGCCAAACATCAAC +
Preference number: 5 (lower is better)
Translates to: VLVRTREGPLGFSEVRGSVKVKP*MMPNIN
Trigger: GTTGATGTTTGGCATCATCAAAGGCTTTACCTTCAC...GCTGCCTCTCACTTCTGAAAACCCCAAGGGTCCCTCACGTGTCCTCACCAATAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000156066.8
CDS-3UTR CAA 90 bp TCTTCACCATCCAGAACCAACCCTGAGTCTGCCAAGAGAGATGGCCAGAAGAACGGGCTCCTGACGATCTaGTTAAATACTCTGTTGTGG +
Preference number: 5 (lower is better)
Translates to: SSPSRTNPESAKRDGQKNGLLTI*LNTLLW
Trigger: CCACAACAGAGTATTTAACAAGATCGTCAGGAGCCC...GTTCTTCTGGCCATCTCTCTTGGCAGACTCAGGGTTGGTTCTGGATGGTGAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000156066.8
CDS-3UTR CAA 90 bp CAAGAGAGATGGCCAGAAGAACAAGGGACACATCTCAGCCCCAGCTCACCATGTCTGGAGTTTTCGTCGTaGAGTGTCTTAAACTTGCTG +
Preference number: 5 (lower is better)
Translates to: QERWPEEQGTHLSPSSPCLEFSS*SVLNLL
Trigger: CAGCAAGTTTAAGACACTCAACGACGAAAACTCCAG...ACATGGTGAGCTGGGGCTGAGATGTGTCCCTTGTTCTTCTGGCCATCTCTCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000156066.8
CDS-3UTR CAA 90 bp CCAACCCTGAGTCTGCCAAGAGAGATGGCCAGAAGAACAAGGGACACATCTCAGCTGGAGTTTTCGTCGTaGAGTGTCTTAAACTTGCTG +
Preference number: 5 (lower is better)
Translates to: PTLSLPREMARRTRDTSQLEFSS*SVLNLL
Trigger: CAGCAAGTTTAAGACACTCAACGACGAAAACTCCAG...CTGAGATGTGTCCCTTGTTCTTCTGGCCATCTCTCTTGGCAGACTCAGGGTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000156066.8
CDS-3UTR CAA 90 bp ACTCTTCACCATCCAGAACCAACCCTGAGTCTGCCAAGAGAGATGGCCAGAAGAGACAATGACAAGCCTTaGGATGAGGCGCTGATTGAA +
Preference number: 5 (lower is better)
Translates to: TLHHPEPTLSLPREMARRDNDKP*DEALIE
Trigger: TTCAATCAGCGCCTCATCCAAAGGCTTGTCATTGTC...TCTTCTGGCCATCTCTCTTGGCAGACTCAGGGTTGGTTCTGGATGGTGAAGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000156066.8
CDS GCA 90 bp CTCTCCAAACAGTATGTTCTCCCTCACATTTCCATGGAAGATCCATaGTTGCTGGGAAACGTAAGCCAAAGGTCCATTGACAGCCACGAC +
Preference number: 5 (lower is better)
Translates to: LSKQYVLPHISMEDP*LLGNVSQRSIDSHD
Trigger: GTCGTGGCTGTCAATGGACCTTTGGCTTACGTTTCCCAGCAAGCATGGATCTTCCATGGAAATGTGAGGGAGAACATACTGTTTGGAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000080115.10
ENSMUST00000129898.8
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000152438.2
ENSMUST00000156610.8
CDS-3UTR CAA 90 bp GATCTTGTTAAATACTCTGTTGTGGAGAGAGGAAGACGCCATCAGTGTAGTGTTGCATCATCCACAGGATaGGGTGCCAACCTTGCACGG +
Preference number: 5 (lower is better)
Translates to: DLVKYSVVERGRRHQCSVASSTG*GANLAR
Trigger: CCGTGCAAGGTTGGCACCCAATCCTGTGGATGATGC...AACACTACACTGATGGCGTCTTCCTCTCTCCACAACAGAGTATTTAACAAGATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000129898.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR CAA 90 bp CAAATCACCCACAGGACCTTTACAGTCCAACCTCTGCAGCTAGTAACATCGCAAACGATGCACAGGATGTaGGCTACAACGTCCATCAGA +
Preference number: 5 (lower is better)
Translates to: QITHRTFTVQPLQLVTSQTMHRM*ATTSIR
Trigger: TCTGATGGACGTTGTAGCCAACATCCTGTGCATCGT...TTGCGATGTTACTAGCTGCAGAGGTTGGACTGTAAAGGTCCTGTGGGTGATTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000129898.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR CAA 90 bp CAACTCAGGAGAGGATGCTGCCCTCATTTAGAGTGGGTTTTCCTTGTTGGCAACAATGTGCTGGAGGATTaGGTGAATGAGAACTGTCGG +
Preference number: 5 (lower is better)
Translates to: QLRRGCCPHLEWVFLVGNNVLED*VNENCR
Trigger: CCGACAGTTCTCATTCACCAAATCCTCCAGCACATT...GTTGCCAACAAGGAAAACCCACTCTAAATGAGGGCAGCATCCTCTCCTGAGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000152438.2
CDS-3UTR CAA 90 bp CAGCTTCCAACCTACCAGCTTTGTCTGCACTCTTCACCATCCAGAACCAACCCTTGTCTGTCACTGAAATaGCTGACCTTCGGAAAGTTG +
Preference number: 5 (lower is better)
Translates to: QLPTYQLCLHSSPSRTNPCLSLK*LTFGKL
Trigger: CAACTTTCCGAAGGTCAGCAATTTCAGTGACAGACA...AGGGTTGGTTCTGGATGGTGAAGAGTGCAGACAAAGCTGGTAGGTTGGAAGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR CAA 90 bp CCCATTTTCCATCACCAGGACAAGGTCACAGTTGAGAACGGTGTTCAGGCGATGTGTCTGTCACTGAAATaGCTGACCTTCGGAAAGTTG +
Preference number: 5 (lower is better)
Translates to: PIFHHQDKVTVENGVQAMCLSLK*LTFGKL
Trigger: CAACTTTCCGAAGGTCAGCAATTTCAGTGACAGACA...CATCGCCTGAACACCGTTCTCAACTGTGACCTTGTCCTGGTGATGGAAAATGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000129898.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR CAA 90 bp ATGGCCAGAAGAACAAGGGACACATCTCAGCCCCAGCTCACCATGTGCTCCATGCCGAGAAAGGCAAGATaGCAATGGAAAACTTCATTA +
Preference number: 5 (lower is better)
Translates to: MARRTRDTSQPQLTMCSMPRKAR*QWKTSL
Trigger: TAATGAAGTTTTCCATTGCAATCTTGCCTTTCTCGG...CATGGAGCACATGGTGAGCTGGGGCTGAGATGTGTCCCTTGTTCTTCTGGCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR CAA 90 bp TTGGTGAGGACACGTGAGGGACCCTTGGGGTTTTCAGAAGTGAGAGGCAGCTTCCCGAGAAAGGCAAGATaGCAATGGAAAACTTCATTA +
Preference number: 5 (lower is better)
Translates to: LVRTREGPLGFSEVRGSFPRKAR*QWKTSL
Trigger: TAATGAAGTTTTCCATTGCAATCTTGCCTTTCTCGG...GAAGCTGCCTCTCACTTCTGAAAACCCCAAGGGTCCCTCACGTGTCCTCACCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR CAA 90 bp CAGCTTTGTCTGCACTCTTCACCATCCAGAACCAACCCTGAGTCTGCCAAGAGAGACATGAACTGTGTGTaGGTACCTTTGGTGGTTGTA +
Preference number: 5 (lower is better)
Translates to: QLCLHSSPSRTNPESAKRDMNCV*VPLVVV
Trigger: TACAACCACCAAAGGTACCAACACACAGTTCATGTC...TCTCTTGGCAGACTCAGGGTTGGTTCTGGATGGTGAAGAGTGCAGACAAAGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR CAA 90 bp CCCATTCTCAGACATTATGTAGTATTGGTGAGGACACGTGAGGGACCCTTGGGGACACAGACACCATGCTaGCTATGTAAACCAACTGGT +
Preference number: 5 (lower is better)
Translates to: PILRHYVVLVRTREGPLGTQTPC*LCKPTG
Trigger: ACCAGTTGGTTTACATAGCAAGCATGGTGTCTGTGT...CCCCAAGGGTCCCTCACGTGTCCTCACCAATACTACATAATGTCTGAGAATGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000156066.8
CDS-3UTR CAA 90 bp CAGCTTCCAACCTACCAGCTTTGTCTGCACTCTTCACCATCCAGAACCAACCCTACACAGACACCATGCTaGCTATGTAAACCAACTGGT +
Preference number: 5 (lower is better)
Translates to: QLPTYQLCLHSSPSRTNPTQTPC*LCKPTG
Trigger: ACCAGTTGGTTTACATAGCAAGCATGGTGTCTGTGT...AGGGTTGGTTCTGGATGGTGAAGAGTGCAGACAAAGCTGGTAGGTTGGAAGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000156066.8
CDS-3UTR CAA 90 bp CCATCCAGAACCAACCCTGAGTCTGCCAAGAGAGATGGCCAGAAGAACAAGGGAGTGAAGGTAAAGCCTTaGATGATGCCAAACATCAAC +
Preference number: 5 (lower is better)
Translates to: PSRTNPESAKRDGQKNKGVKVKP*MMPNIN
Trigger: GTTGATGTTTGGCATCATCAAAGGCTTTACCTTCAC...TCCCTTGTTCTTCTGGCCATCTCTCTTGGCAGACTCAGGGTTGGTTCTGGATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000156066.8
CDS-3UTR CAA 90 bp TTCCAACCTACCAGCTTTGTCTGCACTCTTCACCATCCAGAACCAACCCTGAGTGCCATCAGTGTAGTGTaGGTGAAGGTAAAGCCTTTG +
Preference number: 5 (lower is better)
Translates to: FQPTSFVCTLHHPEPTLSAISVV*VKVKPL
Trigger: CAAAGGCTTTACCTTCACCAACACTACACTGATGGC...ACTCAGGGTTGGTTCTGGATGGTGAAGAGTGCAGACAAAGCTGGTAGGTTGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000156066.8
CDS-3UTR CAA 90 bp CAAGAGAGATGGCCAGAAGAACAAGGGACACATCTCAGCCCCAGCTCACCATGTTTGAGTGTCTTAAACTaGCTGATGCAGTCGTCCTTT +
Preference number: 5 (lower is better)
Translates to: QERWPEEQGTHLSPSSPCLSVLN*LMQSSF
Trigger: AAAGGACGACTGCATCAGCAAGTTTAAGACACTCAA...ACATGGTGAGCTGGGGCTGAGATGTGTCCCTTGTTCTTCTGGCCATCTCTCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000156066.8
CDS-3UTR CAA 90 bp AGAAAGTTAGAATGTTCCCATTCTCAGACATTATGTAGTATTGGTGAGGACACGCGGCTCGGCCAGTCTTaGGGACAGGTCCCCACTTTG +
Preference number: 5 (lower is better)
Translates to: RKLECSHSQTLCSIGEDTRLGQS*GQVPTL
Trigger: CAAAGTGGGGACCTGTCCCAAAGACTGGCCGAGCCG...CGTGTCCTCACCAATACTACATAATGTCTGAGAATGGGAACATTCTAACTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000156066.8
CDS TCA 90 bp GATCTGATCGACTTTGCTCGCTGTATAGCTCTGGCCTCTGTTTCTTaGAAACGTGCCTTTTCTGAATTTGTGCCTTCGGCGGGTCACTTT +
Preference number: 5 (lower is better)
Translates to: DLIDFARCIALASVS*KRAFSEFVPSAGHF
Trigger: AAAGTGACCCGCCGAAGGCACAAATTCAGAAAAGGCACGTTTTCAAGAAACAGAGGCCAGAGCTATACAGCGAGCAAAGTCGATCAGATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000080115.10
ENSMUST00000129898.8
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000152438.2
ENSMUST00000156610.8
CDS-3UTR CAA 90 bp CCAACCCTGAGTCTGCCAAGAGAGATGGCCAGAAGAACAAGGGACACATCTCAGAAAGTTGAGTTGAGTTaGGCCATAAACATCTGGATC +
Preference number: 5 (lower is better)
Translates to: PTLSLPREMARRTRDTSQKVELS*AINIWI
Trigger: GATCCAGATGTTTATGGCCAAACTCAACTCAACTTT...CTGAGATGTGTCCCTTGTTCTTCTGGCCATCTCTCTTGGCAGACTCAGGGTTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR CAA 90 bp ACTCTTCACCATCCAGAACCAACCCTGAGTCTGCCAAGAGAGATGGCCAGAAGACTTCGGAAAGTTGAGTaGAGTTTGGCCATAAACATC +
Preference number: 5 (lower is better)
Translates to: TLHHPEPTLSLPREMARRLRKVE*SLAINI
Trigger: GATGTTTATGGCCAAACTCAACTCAACTTTCCGAAG...TCTTCTGGCCATCTCTCTTGGCAGACTCAGGGTTGGTTCTGGATGGTGAAGAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR CAA 90 bp CAGCTTTGTCTGCACTCTTCACCATCCAGAACCAACCCTGAGTCTGCCAAGAGACTTCGGAAAGTTGAGTaGAGTTTGGCCATAAACATC +
Preference number: 5 (lower is better)
Translates to: QLCLHSSPSRTNPESAKRLRKVE*SLAINI
Trigger: GATGTTTATGGCCAAACTCAACTCAACTTTCCGAAG...TCTCTTGGCAGACTCAGGGTTGGTTCTGGATGGTGAAGAGTGCAGACAAAGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR CAA 90 bp GAACCAACCCTGAGTCTGCCAAGAGAGATGGCCAGAAGAACAAGGGACACATCTTCAGAAACTCATTCATaGTCTGAACCCGTTTGTCTG +
Preference number: 5 (lower is better)
Translates to: EPTLSLPREMARRTRDTSSETHS*SEPVCL
Trigger: CAGACAAACGGGTTCAGACAATGAATGAGTTTCTGA...AGATGTGTCCCTTGTTCTTCTGGCCATCTCTCTTGGCAGACTCAGGGTTGGTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR CAA 90 bp TTCCAGACCCACAGTGCAGATGTCCACCTCGTCAATGATGATGGTACCAGAGGCCCGAGAAAGGCAAGATaGCAATGGAAAACTTCATTA +
Preference number: 5 (lower is better)
Translates to: FQTHSADVHLVNDDGTRGPRKAR*QWKTSL
Trigger: TAATGAAGTTTTCCATTGCAATCTTGCCTTTCTCGG...GCCTCTGGTACCATCATCATTGACGAGGTGGACATCTGCACTGTGGGTCTGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000129898.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR CAA 90 bp TTGGCAACTGTATCTGGGAATGTTCTCAGAAAGAACCCAGTAGAGGGTTTAGACGCTTCGGCCACTGCTTaGACCGAGAAAGGCAAGATT +
Preference number: 5 (lower is better)
Translates to: LATVSGNVLRKNPVEGLDASATA*TEKGKI
Trigger: AATCTTGCCTTTCTCGGTCAAAGCAGTGGCCGAAGC...GTCTAAACCCTCTACTGGGTTCTTTCTGAGAACATTCCCAGATACAGTTGCCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000152438.2
CDS-3UTR CAA 90 bp CTTGTTGGCAACTGTATCTGGGAATGTTCTCAGAAAGAACCCAGTAGAGGGTTTATCTGGGTCTTCAGGTaGAGTGATGTAGGATGGGGG +
Preference number: 5 (lower is better)
Translates to: LVGNCIWECSQKEPSRGFIWVFR*SDVGWG
Trigger: CCCCCATCCTACATCACTCAACCTGAAGACCCAGAT...AAACCCTCTACTGGGTTCTTTCTGAGAACATTCCCAGATACAGTTGCCAACAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000152438.2
CDS-3UTR CAA 90 bp CAGCAAGGCCACAACAAAGGTGACAATGTTCATGAGAATGTCCATTCTGAGAGCTCTTCCATCAACTCCTaGTGGGTGCCCTTTTCACAG +
Preference number: 5 (lower is better)
Translates to: QQGHNKGDNVHENVHSESSSINS*WVPFSQ
Trigger: CTGTGAAAAGGGCACCCACAAGGAGTTGATGGAAGA...GCTCTCAGAATGGACATTCTCATGAACATTGTCACCTTTGTTGTGGCCTTGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000129898.8
ENSMUST00000131806.8
CDS-3UTR CAA 90 bp CTCAGACATTATGTAGTATTGGTGAGGACACGTGAGGGACCCTTGGGGTTTTCAGGGCTCCTGACGATCTaGTTAAATACTCTGTTGTGG +
Preference number: 5 (lower is better)
Translates to: LRHYVVLVRTREGPLGFSGLLTI*LNTLLW
Trigger: CCACAACAGAGTATTTAACAAGATCGTCAGGAGCCC...TGAAAACCCCAAGGGTCCCTCACGTGTCCTCACCAATACTACATAATGTCTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000156066.8
CDS-3UTR CAA 90 bp CAACCTACCAGCTTTGTCTGCACTCTTCACCATCCAGAACCAACCCTGAGTCTGAAAGTTGAGTTGAGTTaGGCCATAAACATCTGGATC +
Preference number: 5 (lower is better)
Translates to: QPTSFVCTLHHPEPTLSLKVELS*AINIWI
Trigger: GATCCAGATGTTTATGGCCAAACTCAACTCAACTTT...CAGACTCAGGGTTGGTTCTGGATGGTGAAGAGTGCAGACAAAGCTGGTAGGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR CAA 90 bp CGGGCTTCTCAGCGAGGACTTCAGGCTTGTCAAACTCAATCACCTTCCCATTTTTCAGAAACTCATTCATaGTCTGAACCCGTTTGTCTG +
Preference number: 5 (lower is better)
Translates to: RASQRGLQACQTQSPSHFSETHS*SEPVCL
Trigger: CAGACAAACGGGTTCAGACAATGAATGAGTTTCTGA...AAAATGGGAAGGTGATTGAGTTTGACAAGCCTGAAGTCCTCGCTGAGAAGCCCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000129898.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR CAA 90 bp CCTTTGGATGAGGCGCTGATTGAAGAAAAACTAAGGGTCACCAGCAAGGCCACATCAGAAACTCATTCATaGTCTGAACCCGTTTGTCTG +
Preference number: 5 (lower is better)
Translates to: PLDEALIEEKLRVTSKATSETHS*SEPVCL
Trigger: CAGACAAACGGGTTCAGACAATGAATGAGTTTCTGA...TGTGGCCTTGCTGGTGACCCTTAGTTTTTCTTCAATCAGCGCCTCATCCAAAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000129898.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR CAA 90 bp TCCTGTTCGCACACACACTTGAAGCAATCCACTGAGCTGGATGATGTAAGACAAATGGAAGATCCATGCTaGCTGGGAAACGTAAGCCAA +
Preference number: 5 (lower is better)
Translates to: SCSHTHLKQSTELDDVRQMEDPC*LGNVSQ
Trigger: TTGGCTTACGTTTCCCAGCAAGCATGGATCTTCCAT...TTGTCTTACATCATCCAGCTCAGTGGATTGCTTCAAGTGTGTGTGCGAACAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000129898.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR CAA 90 bp AATCACCCACAGGACCTTTACAGTCCAACCTCTGCAGCTAGTAACATCGCAAATGGGCTCCTGACGATCTaGTTAAATACTCTGTTGTGG +
Preference number: 5 (lower is better)
Translates to: NHPQDLYSPTSAASNIANGLLTI*LNTLLW
Trigger: CCACAACAGAGTATTTAACAAGATCGTCAGGAGCCC...ATTTGCGATGTTACTAGCTGCAGAGGTTGGACTGTAAAGGTCCTGTGGGTGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156066.8
CDS-3UTR CAA 90 bp TGTGTCGAAGAAGCTCATTGGGCTCCTGACGATCTTGTTAAATACTCTGTTGTGAATGTGCTGGAGGATTaGGTGAATGAGAACTGTCGG +
Preference number: 5 (lower is better)
Translates to: CVEEAHWAPDDLVKYSVVNVLED*VNENCR
Trigger: CCGACAGTTCTCATTCACCAAATCCTCCAGCACATT...CACAACAGAGTATTTAACAAGATCGTCAGGAGCCCAATGAGCTTCTTCGACACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000129898.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR CAA 90 bp GTTGTGGAGAGAGGAAGACGCCATCAGTGTAGTGTTGGTGAAGGTAAAGCCTTTTCAGAAACTCATTCATaGTCTGAACCCGTTTGTCTG +
Preference number: 5 (lower is better)
Translates to: VVERGRRHQCSVGEGKAFSETHS*SEPVCL
Trigger: CAGACAAACGGGTTCAGACAATGAATGAGTTTCTGA...AAAGGCTTTACCTTCACCAACACTACACTGATGGCGTCTTCCTCTCTCCACAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000129898.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR CAA 90 bp TCCTTGTTGGCAACTGTATCTGGGAATGTTCTCAGAAAGAACCCAGTAGAGGGTGACATGAACTGTGTGTaGGTACCTTTGGTGGTTGTA +
Preference number: 5 (lower is better)
Translates to: SLLATVSGNVLRKNPVEGDMNCV*VPLVVV
Trigger: TACAACCACCAAAGGTACCAACACACAGTTCATGTC...ACCCTCTACTGGGTTCTTTCTGAGAACATTCCCAGATACAGTTGCCAACAAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000152438.2
CDS-3UTR CAA 90 bp ATCCAGGAACGCTGTCATCTCCAGCCTTGGGCATTTTCCCATCTCATTTGCTTTGTGAAGGTAAAGCCTTaGATGATGCCAAACATCAAC +
Preference number: 5 (lower is better)
Translates to: IQERCHLQPWAFSHLICFVKVKP*MMPNIN
Trigger: GTTGATGTTTGGCATCATCAAAGGCTTTACCTTCAC...AAAGCAAATGAGATGGGAAAATGCCCAAGGCTGGAGATGACAGCGTTCCTGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000156066.8
CDS-3UTR CAA 90 bp AGGAGAGGATGCTGCCCTCATTTAGAGTGGGTTTTCCTTGTTGGCAACTGTATCCCGAGAAAGGCAAGATaGCAATGGAAAACTTCATTA +
Preference number: 5 (lower is better)
Translates to: RRGCCPHLEWVFLVGNCIPRKAR*QWKTSL
Trigger: TAATGAAGTTTTCCATTGCAATCTTGCCTTTCTCGG...GATACAGTTGCCAACAAGGAAAACCCACTCTAAATGAGGGCAGCATCCTCTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000152438.2
CDS-3UTR CAA 90 bp AGGTACACAGCCAAGGGAAAAGATGGTAAATACCGTTTGTGTCCACAAATTCTTTCTTCCATCAACTCCTaGTGGGTGCCCTTTTCACAG +
Preference number: 5 (lower is better)
Translates to: RYTAKGKDGKYRLCPQILSSINS*WVPFSQ
Trigger: CTGTGAAAAGGGCACCCACAAGGAGTTGATGGAAGA...AAGAATTTGTGGACACAAACGGTATTTACCATCTTTTCCCTTGGCTGTGTACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000152438.2
CDS-3UTR CAA 90 bp CCATTTTCTGTGACTTCTGCCTGTAATTTCTCTGGGAGTTTCATTATTGTGTCTAGGGTCTGGTCGACGTaGCAGGCTGTCTTATTGTTC +
Preference number: 5 (lower is better)
Translates to: PFSVTSACNFSGSFIIVSRVWST*QAVLLF
Trigger: GAACAATAAGACAGCCTGCAACGTCGACCAGACCCT...AGACACAATAATGAAACTCCCAGAGAAATTACAGGCAGAAGTCACAGAAAATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156066.8
CDS CCA 90 bp ATTGCTGACCTTCGGAAAGTTGAGTTGAGTTTGGCCATAAACATCTaGATCGGGATGAATATGAGATACACACTTATCCCGACAAGAGCT +
Preference number: 5 (lower is better)
Translates to: IADLRKVELSLAINI*IGMNMRYTLIPTRA
Trigger: AGCTCTTGTCGGGATAAGTGTGTATCTCATATTCATCCCGATCCAGATGTTTATGGCCAAACTCAACTCAACTTTCCGAAGGTCAGCAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000080115.10
ENSMUST00000129898.8
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000152438.2
ENSMUST00000156610.8
CDS-3UTR CAA 90 bp AGAAAGTTAGAATGTTCCCATTCTCAGACATTATGTAGTATTGGTGAGGACACGACGATGCACAGGATGTaGGCTACAACGTCCATCAGA +
Preference number: 5 (lower is better)
Translates to: RKLECSHSQTLCSIGEDTTMHRM*ATTSIR
Trigger: TCTGATGGACGTTGTAGCCAACATCCTGTGCATCGT...CGTGTCCTCACCAATACTACATAATGTCTGAGAATGGGAACATTCTAACTTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR CAA 90 bp AGAAAGTTAGAATGTTCCCATTCTCAGACATTATGTAGTATTGGTGAGGACACGAGAACGAGAGGGGTGTaGTCTCTGTATCTCATCCGA +
Preference number: 5 (lower is better)
Translates to: RKLECSHSQTLCSIGEDTRTRGV*SLYLIR
Trigger: TCGGATGAGATACAGAGACAACACCCCTCTCGTTCT...CGTGTCCTCACCAATACTACATAATGTCTGAGAATGGGAACATTCTAACTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000156066.8
CDS-3UTR CAA 90 bp AGAAAGTTAGAATGTTCCCATTCTCAGACATTATGTAGTATTGGTGAGGACACGACCACAAAACTGATGTaGTGTAGCACTGACTTGGGG +
Preference number: 5 (lower is better)
Translates to: RKLECSHSQTLCSIGEDTTTKLM*CSTDLG
Trigger: CCCCAAGTCAGTGCTACACAACATCAGTTTTGTGGT...CGTGTCCTCACCAATACTACATAATGTCTGAGAATGGGAACATTCTAACTTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR CAA 90 bp AGGTACACAGCCAAGGGAAAAGATGGTAAATACCGTTTGTGTCCACAAATTCTTCTTCGGAAAGTTGAGTaGAGTTTGGCCATAAACATC +
Preference number: 5 (lower is better)
Translates to: RYTAKGKDGKYRLCPQILLRKVE*SLAINI
Trigger: GATGTTTATGGCCAAACTCAACTCAACTTTCCGAAG...AAGAATTTGTGGACACAAACGGTATTTACCATCTTTTCCCTTGGCTGTGTACCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000152438.2
CDS-3UTR CAA 90 bp AGGTACACAGCCAAGGGAAAAGATGGTAAATACCGTTTGTGTCCACAAATTCTTTCAGAAACTCATTCATaGTCTGAACCCGTTTGTCTG +
Preference number: 5 (lower is better)
Translates to: RYTAKGKDGKYRLCPQILSETHS*SEPVCL
Trigger: CAGACAAACGGGTTCAGACAATGAATGAGTTTCTGA...AAGAATTTGTGGACACAAACGGTATTTACCATCTTTTCCCTTGGCTGTGTACCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000152438.2
CDS-3UTR CAA 90 bp CCATTTTCTGTGACTTCTGCCTGTAATTTCTCTGGGAGTTTCATTATTGTGTCTGACATGAACTGTGTGTaGGTACCTTTGGTGGTTGTA +
Preference number: 5 (lower is better)
Translates to: PFSVTSACNFSGSFIIVSDMNCV*VPLVVV
Trigger: TACAACCACCAAAGGTACCAACACACAGTTCATGTC...AGACACAATAATGAAACTCCCAGAGAAATTACAGGCAGAAGTCACAGAAAATGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000129898.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR CAA 90 bp CCATTTTCTGTGACTTCTGCCTGTAATTTCTCTGGGAGTTTCATTATTGTGTCTCTGGAGTTTTCGTCGTaGAGTGTCTTAAACTTGCTG +
Preference number: 5 (lower is better)
Translates to: PFSVTSACNFSGSFIIVSLEFSS*SVLNLL
Trigger: CAGCAAGTTTAAGACACTCAACGACGAAAACTCCAG...AGACACAATAATGAAACTCCCAGAGAAATTACAGGCAGAAGTCACAGAAAATGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000156066.8
CDS-3UTR CAA 90 bp GCCAAGGGAAAAGATGGTAAATACCGTTTGTGTCCACAAATTCTTCTGTTTCAGAAAGTTGAGTTGAGTTaGGCCATAAACATCTGGATC +
Preference number: 5 (lower is better)
Translates to: AKGKDGKYRLCPQILLFQKVELS*AINIWI
Trigger: GATCCAGATGTTTATGGCCAAACTCAACTCAACTTT...CTGAAACAGAAGAATTTGTGGACACAAACGGTATTTACCATCTTTTCCCTTGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000152438.2
CDS-3UTR CAA 90 bp CCATTTTCTGTGACTTCTGCCTGTAATTTCTCTGGGAGTTTCATTATTGTGTCTAAAGTTGAGTTGAGTTaGGCCATAAACATCTGGATC +
Preference number: 5 (lower is better)
Translates to: PFSVTSACNFSGSFIIVSKVELS*AINIWI
Trigger: GATCCAGATGTTTATGGCCAAACTCAACTCAACTTT...AGACACAATAATGAAACTCCCAGAGAAATTACAGGCAGAAGTCACAGAAAATGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000129898.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS-3UTR CAA 90 bp AGAAAGTTAGAATGTTCCCATTCTCAGACATTATGTAGTATTGGTGAGGACACGCCGAGAAAGGCAAGATaGCAATGGAAAACTTCATTA +
Preference number: 5 (lower is better)
Translates to: RKLECSHSQTLCSIGEDTPRKAR*QWKTSL
Trigger: TAATGAAGTTTTCCATTGCAATCTTGCCTTTCTCGG...CGTGTCCTCACCAATACTACATAATGTCTGAGAATGGGAACATTCTAACTTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000080115.10
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000156610.8
CDS CAA 72 bp GTCGGCCCCAAGGCTGCCATGACGATGCACAGGATGTaGGCTACAACGTCCATCAGAACTCGGGTTCTCTGG +
Preference number: 6 (lower is better)
Translates to: VGPKAAMTMHRM*ATTSIRTRVLW
Trigger: CCAGAGAACCCGAGTTCTGATGGACGTTGTAGCCAACATCCTGTGCATCGTCATGGCAGCCTTGGGGCCGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000080115.10
ENSMUST00000129898.8
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000152438.2
ENSMUST00000156610.8
CDS GCA 72 bp TTAGCGTGGAGAGGGCCACCTTCAGTCGGATCGCTGTaGGGTAATTTATGGCCCAGGCAAGGGCCCAAAAGA +
Preference number: 6 (lower is better)
Translates to: LAWRGPPSVGSL*GNLWPRQGPKR
Trigger: TCTTTTGGGCCCTTGCCTGGGCCATAAATTACCGCACAGCGATCCGACTGAAGGTGGCCCTCTCCACGCTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000080115.10
ENSMUST00000129898.8
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000152438.2
ENSMUST00000156610.8
CDS CCA 72 bp AGGCTGGGGTCATATCTCTCGGCAAAGGATCTCCGATaGCCTCTGCGATCCAGGTCTGAGATAAGGTACGGG +
Preference number: 6 (lower is better)
Translates to: RLGSYLSAKDLR*PLRSRSEIRYG
Trigger: CCCGTACCTTATCTCAGACCTGGATCGCAGAGGCCATCGGAGATCCTTTGCCGAGAGATATGACCCCAGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000080115.10
ENSMUST00000129898.8
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000152438.2
ENSMUST00000156610.8
CDS CCA 72 bp TTGCACGGGGTCGCACTGGGATCATGGTTTTCAGGCTaGGGTCATATCTCTCGGCAAAGGATCTCCGATGGC +
Preference number: 6 (lower is better)
Translates to: LHGVALGSWFSG*GHISRQRISDG
Trigger: GCCATCGGAGATCCTTTGCCGAGAGATATGACCCCAGCCTGAAAACCATGATCCCAGTGCGACCCCGTGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000080115.10
ENSMUST00000129898.8
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000152438.2
ENSMUST00000156610.8
CDS CAA 90 bp GATCCCGATGTGTCCGGAGGAGATGCTGGTAATGTGCTGGAGGATTaGGTGAATGAGAACTGTCGGCCCCAAGGCTGCCATGACGATGCA +
Preference number: 6 (lower is better)
Translates to: DPDVSGGDAGNVLED*VNENCRPQGCHDDA
Trigger: TGCATCGTCATGGCAGCCTTGGGGCCGACAGTTCTCATTCACCAAATCCTCCAGCACATTACCAGCATCTCCTCCGGACACATCGGGATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000080115.10
ENSMUST00000129898.8
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000152438.2
ENSMUST00000156610.8
CDS TCA 72 bp TCAGCGTGTGCTTGTAACTTCGAATCATCACCGGTGTaGGCCAGGAAAACGTGGCGAAGGACAGCAGCCCAG +
Preference number: 6 (lower is better)
Translates to: SACACNFESSPV*ARKTWRRTAAQ
Trigger: CTGGGCTGCTGTCCTTCGCCACGTTTTCCTGGCTCACACCGGTGATGATTCGAAGTTACAAGCACACGCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000080115.10
ENSMUST00000129898.8
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000152438.2
ENSMUST00000156610.8
CDS CAA 72 bp GTGTCCGGAGGAGATGCTGGTAATGTGCTGGAGGATTaGGTGAATGAGAACTGTCGGCCCCAAGGCTGCCAT +
Preference number: 6 (lower is better)
Translates to: VSGGDAGNVLED*VNENCRPQGCH
Trigger: ATGGCAGCCTTGGGGCCGACAGTTCTCATTCACCAAATCCTCCAGCACATTACCAGCATCTCCTCCGGACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000080115.10
ENSMUST00000129898.8
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000152438.2
ENSMUST00000156610.8
CDS TCA 72 bp CCAAAGGATCTGGAATCTCTTGGCGTTGATGTCCGATaGGTCATAAGGAGACAGTGGGGGCAGGGTGTCCAC +
Preference number: 6 (lower is better)
Translates to: PKDLESLGVDVR*VIRRQWGQGVH
Trigger: GTGGACACCCTGCCCCCACTGTCTCCTTATGACTCATCGGACATCAACGCCAAGAGATTCCAGATCCTTTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000080115.10
ENSMUST00000129898.8
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000152438.2
ENSMUST00000156610.8
CDS CCA 72 bp TCATCTGACTGTACCAGCGTCTTCATCCCTCTGAGCTaGGCTCTCCTTCAGGGTCTCCACCATGGCTACATT +
Preference number: 6 (lower is better)
Translates to: SSDCTSVFIPLS*ALLQGLHHGYI
Trigger: AATGTAGCCATGGTGGAGACCCTGAAGGAGAGCCCAGCTCAGAGGGATGAAGACGCTGGTACAGTCAGATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000129898.8
ENSMUST00000152438.2
CDS CAA 90 bp ATGAGAACTGTCGGCCCCAAGGCTGCCATGACGATGCACAGGATGTaGGCTACAACGTCCATCAGAACTCGGGTTCTCTGGAATTTCCAG +
Preference number: 6 (lower is better)
Translates to: MRTVGPKAAMTMHRM*ATTSIRTRVLWNFQ
Trigger: CTGGAAATTCCAGAGAACCCGAGTTCTGATGGACGTTGTAGCCAACATCCTGTGCATCGTCATGGCAGCCTTGGGGCCGACAGTTCTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000080115.10
ENSMUST00000129898.8
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000152438.2
ENSMUST00000156610.8
CDS CCA 72 bp CGTACACTGCACAAACGACCATTAGGATCGGGATGGTaGCTGGCAAGGGACAAAACAAGGCAGCCTCAAACA +
Preference number: 6 (lower is better)
Translates to: RTLHKRPLGSGW*LARDKTRQPQT
Trigger: TGTTTGAGGCTGCCTTGTTTTGTCCCTTGCCAGCCACCATCCCGATCCTAATGGTCGTTTGTGCAGTGTACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000080115.10
ENSMUST00000129898.8
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000152438.2
ENSMUST00000156610.8
CDS CCA 72 bp GCCACAGGGGCAGTGAGCTTGCGTTTCAGGAAAATGTaGCAGGTGAAAGTAGACACAATGGCTATGGTGGAC +
Preference number: 6 (lower is better)
Translates to: ATGAVSLRFRKM*QVKVDTMAMVD
Trigger: GTCCACCATAGCCATTGTGTCTACTTTCACCTGCCACATTTTCCTGAAACGCAAGCTCACTGCCCCTGTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000080115.10
ENSMUST00000129898.8
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000152438.2
ENSMUST00000156610.8
CDS TCA 72 bp TCCATGCTTGCTGGGAAACGTAAGCCAAAGGTCCATTaGCAGCCACGACCCCTTTCTGTAACTGCATCTGTC +
Preference number: 6 (lower is better)
Translates to: SMLAGKRKPKVH*QPRPLSVTASV
Trigger: GACAGATGCAGTTACAGAAAGGGGTCGTGGCTGTCAATGGACCTTTGGCTTACGTTTCCCAGCAAGCATGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000080115.10
ENSMUST00000129898.8
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000152438.2
ENSMUST00000156610.8
CDS CAA 72 bp TTTCTCACCACAAAACTGATGTTGTGTAGCACTGACTaGGGGCTGCCACTTTGCCACTCCGGGCTAGCAACT +
Preference number: 6 (lower is better)
Translates to: FLTTKLMLCSTD*GLPLCHSGLAT
Trigger: AGTTGCTAGCCCGGAGTGGCAAAGTGGCAGCCCCAAGTCAGTGCTACACAACATCAGTTTTGTGGTGAGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000080115.10
ENSMUST00000129898.8
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000152438.2
ENSMUST00000156610.8
CDS TCA 72 bp ACACACTTATCCCGACAAGAGCTGTGGACCCCAGAATaGAAAAGGCGTACACTGCACAAACGACCATTAGGA +
Preference number: 6 (lower is better)
Translates to: THLSRQELWTPE*KRRTLHKRPLG
Trigger: TCCTAATGGTCGTTTGTGCAGTGTACGCCTTTTTCATTCTGGGGTCCACAGCTCTTGTCGGGATAAGTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000080115.10
ENSMUST00000129898.8
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000152438.2
ENSMUST00000156610.8
CDS TCA 72 bp GACTTTGCTCGCTGTATAGCTCTGGCCTCTGTTTCTTaGAAACGTGCCTTTTCTGAATTTGTGCCTTCGGCG +
Preference number: 6 (lower is better)
Translates to: DFARCIALASVS*KRAFSEFVPSA
Trigger: CGCCGAAGGCACAAATTCAGAAAAGGCACGTTTTCAAGAAACAGAGGCCAGAGCTATACAGCGAGCAAAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000080115.10
ENSMUST00000129898.8
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000152438.2
ENSMUST00000156610.8
CDS CAA 72 bp ATGGCAATCACACTAAATGCCACAGGGGCAGTGAGCTaGCGTTTCAGGAAAATGTGGCAGGTGAAAGTAGAC +
Preference number: 6 (lower is better)
Translates to: MAITLNATGAVS*RFRKMWQVKVD
Trigger: GTCTACTTTCACCTGCCACATTTTCCTGAAACGCAAGCTCACTGCCCCTGTGGCATTTAGTGTGATTGCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000080115.10
ENSMUST00000129898.8
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000152438.2
ENSMUST00000156610.8
CDS GCA 72 bp CAGTATGTTCTCCCTCACATTTCCATGGAAGATCCATaGTTGCTGGGAAACGTAAGCCAAAGGTCCATTGAC +
Preference number: 6 (lower is better)
Translates to: QYVLPHISMEDP*LLGNVSQRSID
Trigger: GTCAATGGACCTTTGGCTTACGTTTCCCAGCAAGCATGGATCTTCCATGGAAATGTGAGGGAGAACATACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000080115.10
ENSMUST00000129898.8
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000152438.2
ENSMUST00000156610.8
CDS CAA 90 bp ACATTAAACATGGCAATCACACTAAATGCCACAGGGGCAGTGAGCTaGCGTTTCAGGAAAATGTGGCAGGTGAAAGTAGACACAATGGCT +
Preference number: 6 (lower is better)
Translates to: TLNMAITLNATGAVS*RFRKMWQVKVDTMA
Trigger: AGCCATTGTGTCTACTTTCACCTGCCACATTTTCCTGAAACGCAAGCTCACTGCCCCTGTGGCATTTAGTGTGATTGCCATGTTTAATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000080115.10
ENSMUST00000129898.8
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000152438.2
ENSMUST00000156610.8
CDS TCA 72 bp TCTGAATTTGTGCCTTCGGCGGGTCACTTTTCCTGTTaGTTTCTTGTTCCCATGTCAAGGTGGCATTTGCTA +
Preference number: 6 (lower is better)
Translates to: SEFVPSAGHFSC*FLVPMSRWHLL
Trigger: TAGCAAATGCCACCTTGACATGGGAACAAGAAATCAACAGGAAAAGTGACCCGCCGAAGGCACAAATTCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000080115.10
ENSMUST00000129898.8
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000152438.2
ENSMUST00000156610.8
CDS CAA 90 bp ACCCGTTTGTCTGTCACTGAAATTGCTGACCTTCGGAAAGTTGAGTaGAGTTTGGCCATAAACATCTGGATCGGGATGAATATGAGATAC +
Preference number: 6 (lower is better)
Translates to: TRLSVTEIADLRKVE*SLAINIWIGMNMRY
Trigger: GTATCTCATATTCATCCCGATCCAGATGTTTATGGCCAAACTCAACTCAACTTTCCGAAGGTCAGCAATTTCAGTGACAGACAAACGGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000080115.10
ENSMUST00000129898.8
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000152438.2
ENSMUST00000156610.8
CDS TCA 72 bp CTTGATAGTATATTGAGTACCTCGCCTGCAGAGATGTaGGTTAACGTCTTAAAGGACAGCAGGTTTTCGAAG +
Preference number: 6 (lower is better)
Translates to: LDSILSTSPAEM*VNVLKDSRFSK
Trigger: CTTCGAAAACCTGCTGTCCTTTAAGACGTTAACTCACATCTCTGCAGGCGAGGTACTCAATATACTATCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000080115.10
ENSMUST00000129898.8
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000152438.2
ENSMUST00000156610.8
CDS TCA 72 bp ATCAGCTTGATGCAGGTCAGAAACTCATTCATTGTCTaGACCCGTTTGTCTGTCACTGAAATTGCTGACCTT +
Preference number: 6 (lower is better)
Translates to: ISLMQVRNSFIV*TRLSVTEIADL
Trigger: AAGGTCAGCAATTTCAGTGACAGACAAACGGGTTCAGACAATGAATGAGTTTCTGACCTGCATCAAGCTGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000080115.10
ENSMUST00000129898.8
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000152438.2
ENSMUST00000156610.8
CDS CAA 72 bp TCTGTCACTGAAATTGCTGACCTTCGGAAAGTTGAGTaGAGTTTGGCCATAAACATCTGGATCGGGATGAAT +
Preference number: 6 (lower is better)
Translates to: SVTEIADLRKVE*SLAINIWIGMN
Trigger: ATTCATCCCGATCCAGATGTTTATGGCCAAACTCAACTCAACTTTCCGAAGGTCAGCAATTTCAGTGACAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000080115.10
ENSMUST00000129898.8
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000152438.2
ENSMUST00000156610.8
CDS TCA 72 bp CCTCAAACAAGGAATAGCTATCACTTGATAGTATATTaGGTACCTCGCCTGCAGAGATGTGAGTTAACGTCT +
Preference number: 6 (lower is better)
Translates to: PQTRNSYHLIVY*VPRLQRCELTS
Trigger: AGACGTTAACTCACATCTCTGCAGGCGAGGTACTCAATATACTATCAAGTGATAGCTATTCCTTGTTTGAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000080115.10
ENSMUST00000129898.8
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000152438.2
ENSMUST00000156610.8
CDS CAA 72 bp ACTGAAATTGCTGACCTTCGGAAAGTTGAGTTGAGTTaGGCCATAAACATCTGGATCGGGATGAATATGAGA +
Preference number: 6 (lower is better)
Translates to: TEIADLRKVELS*AINIWIGMNMR
Trigger: TCTCATATTCATCCCGATCCAGATGTTTATGGCCAAACTCAACTCAACTTTCCGAAGGTCAGCAATTTCAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000080115.10
ENSMUST00000129898.8
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000152438.2
ENSMUST00000156610.8
CDS CAA 90 bp TTGTCTGTCACTGAAATTGCTGACCTTCGGAAAGTTGAGTTGAGTTaGGCCATAAACATCTGGATCGGGATGAATATGAGATACACACTT +
Preference number: 6 (lower is better)
Translates to: LSVTEIADLRKVELS*AINIWIGMNMRYTL
Trigger: AAGTGTGTATCTCATATTCATCCCGATCCAGATGTTTATGGCCAAACTCAACTCAACTTTCCGAAGGTCAGCAATTTCAGTGACAGACAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000080115.10
ENSMUST00000129898.8
ENSMUST00000131423.8
ENSMUST00000131806.8
ENSMUST00000152438.2
ENSMUST00000156610.8