RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ABCC10 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000032842

Ensembl transcript IDs: ENSMUST00000047970.14, ENSMUST00000095261.10, ENSMUST00000167360.8, ENSMUST00000168490.2, ENSMUST00000171584.2

Found 578 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GCCAGTGAGCGAGCCACCAATCAGCACCGTTGCGCGTGGCTTGCATaGGGAGCAGAGAGACGAGGATGGCGGCGGCCAGGCCGCTGCCCA +
Preference number: 1 (lower is better)
Translates to: ASERATNQHRCAWLA*GAERRGWRRPGRCP
Trigger: TGGGCAGCGGCCTGGCCGCCGCCATCCTCGTCTCTCTGCTCCTCATGCAAGCCACGCGCAACGGTGCTGATTGGTGGCTCGCTCACTGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000171584.2
3UTR GCA 90 bp TGGGCTCCCTGCTGGCTGCTCTGCAGGAGCTGCTGGAACAGGGAGTaGGGCTGGTTGCGCAGGGCTGAGGGGGAGTCCAGTTCCACCACC +
Preference number: 1 (lower is better)
Translates to: WAPCWLLCRSCWNRE*GWLRRAEGESSSTT
Trigger: GGTGGTGGAACTGGACTCCCCCTCAGCCCTGCGCAACCAGCCGCACTCCCTGTTCCAGCAGCTCCTGCAGAGCAGCCAGCAGGGAGCCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000171584.2
3UTR GCA 90 bp GGTGGGTGCACAGCAGCCGGGTGGTGTGGCTCAGCACTCCCAGGATaGACCTGTGTAACAGGTGGTTGGCCACATCTGCATCCACAGCAG +
Preference number: 1 (lower is better)
Translates to: GGCTAAGWCGSALPG*TCVTGGWPHLHPQQ
Trigger: CTGCTGTGGATGCAGATGTGGCCAACCACCTGTTACACAGGTGCATCCTGGGAGTGCTGAGCCACACCACCCGGCTGCTGTGCACCCACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000171584.2
3UTR GCA 90 bp TCAACAGCACCACATCAGCCCTTTCCAGGTACTCAGTGCGGTGGGTaGACAGCAGCCGGGTGGTGTGGCTCAGCACTCCCAGGATGCACC +
Preference number: 1 (lower is better)
Translates to: STAPHQPFPGTQCGG*TAAGWCGSALPGCT
Trigger: GGTGCATCCTGGGAGTGCTGAGCCACACCACCCGGCTGCTGTGCACCCACCGCACTGAGTACCTGGAAAGGGCTGATGTGGTGCTGTTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000171584.2
3UTR GCA 90 bp CGGCGCCCTCGCTTTTGCTTTCCTCCTGCACGAGGCAGCCGCATGTaGTCTGTTCCACCTCCAACTCCTCCTCGGTGGTTCTCTCCAGGT +
Preference number: 1 (lower is better)
Translates to: RRPRFCFPPARGSRM*SVPPPTPPRWFSPG
Trigger: ACCTGGAGAGAACCACCGAGGAGGAGTTGGAGGTGGAACAGAGCACATGCGGCTGCCTCGTGCAGGAGGAAAGCAAAAGCGAGGGCGCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000171584.2
3UTR CCA 90 bp CTTTCCAGGTACTCAGTGCGGTGGGTGCACAGCAGCCGGGTGGTGTaGCTCAGCACTCCCAGGATGCACCTGTGTAACAGGTGGTTGGCC +
Preference number: 1 (lower is better)
Translates to: LSRYSVRWVHSSRVV*LSTPRMHLCNRWLA
Trigger: GGCCAACCACCTGTTACACAGGTGCATCCTGGGAGTGCTGAGCCACACCACCCGGCTGCTGTGCACCCACCGCACTGAGTACCTGGAAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000171584.2
3UTR CCA 90 bp CAGCCCTTTCCAGGTACTCAGTGCGGTGGGTGCACAGCAGCCGGGTaGTGTGGCTCAGCACTCCCAGGATGCACCTGTGTAACAGGTGGT +
Preference number: 1 (lower is better)
Translates to: QPFPGTQCGGCTAAG*CGSALPGCTCVTGG
Trigger: ACCACCTGTTACACAGGTGCATCCTGGGAGTGCTGAGCCACACCACCCGGCTGCTGTGCACCCACCGCACTGAGTACCTGGAAAGGGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000171584.2
3UTR CCA 90 bp TTGCGCAGGGCTGAGGGGGAGTCCAGTTCCACCACCCTCCCGGCTTaGAGCACCAGCACACGGTCAGAGTTTAGGATCGTGTTGAGCCTG +
Preference number: 1 (lower is better)
Translates to: LRRAEGESSSTTLPA*STSTRSEFRIVLSL
Trigger: CAGGCTCAACACGATCCTAAACTCTGACCGTGTGCTGGTGCTCCAAGCCGGGAGGGTGGTGGAACTGGACTCCCCCTCAGCCCTGCGCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000171584.2
3UTR GCA 90 bp TCCAGTATGCTCGGTAGACGTGCAGGGCTACGGCGCCCTCGCTTTTaGTTTCCTCCTGCACGAGGCAGCCGCATGTGCTCTGTTCCACCT +
Preference number: 1 (lower is better)
Translates to: SSMLGRRAGLRRPRF*FPPARGSRMCSVPP
Trigger: AGGTGGAACAGAGCACATGCGGCTGCCTCGTGCAGGAGGAAAGCAAAAGCGAGGGCGCCGTAGCCCTGCACGTCTACCGAGCATACTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000171584.2
3UTR GCA 90 bp TGGAGCCTGGGCTGCAGGAAGCTGGATCCTCCCTGGATCCATTTCTaGCGGCCTTCAGCTGAGACAGCCAGTGAGCGAGCCACCAATCAG +
Preference number: 1 (lower is better)
Translates to: WSLGCRKLDPPWIHF*RPSAETASERATNQ
Trigger: CTGATTGGTGGCTCGCTCACTGGCTGTCTCAGCTGAAGGCCGGCAGAAATGGATCCAGGGAGGATCCAGCTTCCTGCAGCCCAGGCTCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000171584.2
3UTR CCA 90 bp TCCATCAACAGCACCACATCAGCCCTTTCCAGGTACTCAGTGCGGTaGGTGCACAGCAGCCGGGTGGTGTGGCTCAGCACTCCCAGGATG +
Preference number: 1 (lower is better)
Translates to: SINSTTSALSRYSVR*VHSSRVVWLSTPRM
Trigger: CATCCTGGGAGTGCTGAGCCACACCACCCGGCTGCTGTGCACCCACCGCACTGAGTACCTGGAAAGGGCTGATGTGGTGCTGTTGATGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000171584.2
3UTR CCA 90 bp AACTCCTCCTCGGTGGTTCTCTCCAGGTCGCATACAGATGGGGACTaGCCTGAGGTAGCCACTTGTTCCTTCTCAGCCCAGGCTGTGGGG +
Preference number: 1 (lower is better)
Translates to: NSSSVVLSRSHTDGD*PEVATCSFSAQAVG
Trigger: CCCCACAGCCTGGGCTGAGAAGGAACAAGTGGCTACCTCAGGCCAGTCCCCATCTGTATGCGACCTGGAGAGAACCACCGAGGAGGAGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000171584.2
3UTR CCA 90 bp AGAAGAGTGCTGTGGAGCCTGGGCTGCAGGAAGCTGGATCCTCCCTaGATCCATTTCTGCCGGCCTTCAGCTGAGACAGCCAGTGAGCGA +
Preference number: 1 (lower is better)
Translates to: RRVLWSLGCRKLDPP*IHFCRPSAETASER
Trigger: TCGCTCACTGGCTGTCTCAGCTGAAGGCCGGCAGAAATGGATCCAGGGAGGATCCAGCTTCCTGCAGCCCAGGCTCCACAGCACTCTTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000171584.2
3UTR CCA 90 bp GGTTTCCAGGGGAGAAGAGAAGCAGCCGTGGGGAGAAGAGTGCTGTaGAGCCTGGGCTGCAGGAAGCTGGATCCTCCCTGGATCCATTTC +
Preference number: 1 (lower is better)
Translates to: GFQGRREAAVGRRVL*SLGCRKLDPPWIHF
Trigger: GAAATGGATCCAGGGAGGATCCAGCTTCCTGCAGCCCAGGCTCCACAGCACTCTTCTCCCCACGGCTGCTTCTCTTCTCCCCTGGAAACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000171584.2
3UTR GCA 90 bp GGGTCTGCTGCTTTGCTGGGCTCCAGTGCCCCAGACCTTTATTTTTaGCTTGAACCTGGTAGACAGCACGGGCAAGTGCAATCCGGGCCC +
Preference number: 1 (lower is better)
Translates to: GSAALLGSSAPDLYF*LEPGRQHGQVQSGP
Trigger: GGGCCCGGATTGCACTTGCCCGTGCTGTCTACCAGGTTCAAGGCAAAAATAAAGGTCTGGGGCACTGGAGCCCAGCAAAGCAGCAGACCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000171584.2
3UTR GCA 90 bp TGTACCAGCGGCAGGATCTCAGAGGGAGGCCCTGTTCGGACCAATTaGCCGGCTTCCATCAACAGCACCACATCAGCCCTTTCCAGGTAC +
Preference number: 1 (lower is better)
Translates to: CTSGRISEGGPVRTN*PASINSTTSALSRY
Trigger: GTACCTGGAAAGGGCTGATGTGGTGCTGTTGATGGAAGCCGGGCAATTGGTCCGAACAGGGCCTCCCTCTGAGATCCTGCCGCTGGTACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000171584.2
3UTR CCA 90 bp TGGTGTGGCTCAGCACTCCCAGGATGCACCTGTGTAACAGGTGGTTaGCCACATCTGCATCCACAGCAGCCAGAGGGTCGTCGAGGAGAT +
Preference number: 1 (lower is better)
Translates to: WCGSALPGCTCVTGG*PHLHPQQPEGRRGD
Trigger: ATCTCCTCGACGACCCTCTGGCTGCTGTGGATGCAGATGTGGCCAACCACCTGTTACACAGGTGCATCCTGGGAGTGCTGAGCCACACCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000171584.2
3UTR GCA 90 bp CAGACCTTTATTTTTGCCTTGAACCTGGTAGACAGCACGGGCAAGTaGAATCCGGGCCCTCTGTCCCCCGCTGAGGGTCACACCTTTCTC +
Preference number: 1 (lower is better)
Translates to: QTFIFALNLVDSTGK*NPGPLSPAEGHTFL
Trigger: GAGAAAGGTGTGACCCTCAGCGGGGGACAGAGGGCCCGGATTGCACTTGCCCGTGCTGTCTACCAGGTTCAAGGCAAAAATAAAGGTCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000171584.2
3UTR CCA 90 bp GGATGTTGTCTCGGATGGTGGCACACTGGATCCAGGGTTCCTGGGTaGCTAGTCCAAAGCCTTTGGACAGTTCTGACACTGCCACCCATC +
Preference number: 1 (lower is better)
Translates to: GCCLGWWHTGSRVPG*LVQSLWTVLTLPPI
Trigger: GATGGGTGGCAGTGTCAGAACTGTCCAAAGGCTTTGGACTAGCCACCCAGGAACCCTGGATCCAGTGTGCCACCATCCGAGACAACATCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000171584.2
3UTR GCA 90 bp CCCAGCTCTTTAGTCCGGCAAGCCTTCACTCGGTCCCCCAGAGCCTaGTCCCACCTGAAGAATTTGATGACTCGAATGCCACTCAGTAAC +
Preference number: 1 (lower is better)
Translates to: PSSLVRQAFTRSPRA*SHLKNLMTRMPLSN
Trigger: GTTACTGAGTGGCATTCGAGTCATCAAATTCTTCAGGTGGGAGCAGGCTCTGGGGGACCGAGTGAAGGCTTGCCGGACTAAAGAGCTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000171584.2
3UTR CCA 90 bp TTTCACTTGGAGGTGACTGATGAAGGTCTTCTGGCTTGCTCCAATTaGGTCCCAGGAGAACAGGGCCTCGTGCAGCTCCAGTGCTGTGGA +
Preference number: 1 (lower is better)
Translates to: FHLEVTDEGLLACSN*VPGEQGLVQLQCCG
Trigger: TCCACAGCACTGGAGCTGCACGAGGCCCTGTTCTCCTGGGACCCAATTGGAGCAAGCCAGAAGACCTTCATCAGTCACCTCCAAGTGAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000171584.2
3UTR CCA 90 bp AAGAGGATGTTGTCTCGGATGGTGGCACACTGGATCCAGGGTTCCTaGGTGGCTAGTCCAAAGCCTTTGGACAGTTCTGACACTGCCACC +
Preference number: 1 (lower is better)
Translates to: KRMLSRMVAHWIQGS*VASPKPLDSSDTAT
Trigger: GGTGGCAGTGTCAGAACTGTCCAAAGGCTTTGGACTAGCCACCCAGGAACCCTGGATCCAGTGTGCCACCATCCGAGACAACATCCTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000171584.2
3UTR GCA 90 bp CATACCCTTTTTCACTTGGAGGTGACTGATGAAGGTCTTCTGGCTTaGTCCAATTGGGTCCCAGGAGAACAGGGCCTCGTGCAGCTCCAG +
Preference number: 1 (lower is better)
Translates to: HTLFHLEVTDEGLLA*SNWVPGEQGLVQLQ
Trigger: CTGGAGCTGCACGAGGCCCTGTTCTCCTGGGACCCAATTGGAGCAAGCCAGAAGACCTTCATCAGTCACCTCCAAGTGAAAAAGGGTATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000171584.2
3UTR GCA 90 bp CACATCTGCATCCACAGCAGCCAGAGGGTCGTCGAGGAGATAGAGTaGTTTCTCCTAGACAGAATGGACAGCAGGCACCATGACCCAAGT +
Preference number: 1 (lower is better)
Translates to: HICIHSSQRVVEEIE*FLLDRMDSRHHDPS
Trigger: ACTTGGGTCATGGTGCCTGCTGTCCATTCTGTCTAGGAGAAAGCACTCTATCTCCTCGACGACCCTCTGGCTGCTGTGGATGCAGATGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000171584.2
3UTR GCA 90 bp GATGCAGATGACCACTGGCAGGGCAGCCCAGAGGTACACACAGGCTaGATCCAAGTATTTGATAACACGGAGTCGTCCCAGCTCTTTAGT +
Preference number: 1 (lower is better)
Translates to: DADDHWQGSPEVHTG*IQVFDNTESSQLFS
Trigger: ACTAAAGAGCTGGGACGACTCCGTGTTATCAAATACTTGGATGCAGCCTGTGTGTACCTCTGGGCTGCCCTGCCAGTGGTCATCTGCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000171584.2
3UTR GCA 90 bp TTCCTCTCCACTGAGTGTGAAACCAGAGACGTGGGTCTGCTGCTTTaGTGGGCTCCAGTGCCCCAGACCTTTATTTTTGCCTTGAACCTG +
Preference number: 1 (lower is better)
Translates to: FLSTECETRDVGLLL*WAPVPQTFIFALNL
Trigger: CAGGTTCAAGGCAAAAATAAAGGTCTGGGGCACTGGAGCCCAGCAAAGCAGCAGACCCACGTCTCTGGTTTCACACTCAGTGGAGAGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000171584.2
3UTR CCA 90 bp CCCCATGAGGACATAGGTGATGAAGATGGTGATGCAGATGACCACTaGCAGGGCAGCCCAGAGGTACACACAGGCTGCATCCAAGTATTT +
Preference number: 1 (lower is better)
Translates to: PHEDIGDEDGDADDH*QGSPEVHTGCIQVF
Trigger: AAATACTTGGATGCAGCCTGTGTGTACCTCTGGGCTGCCCTGCCAGTGGTCATCTGCATCACCATCTTCATCACCTATGTCCTCATGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000171584.2
3UTR-3UTR CCA 90 bp CGCGTGGCTTGCATGAGGAGCAGAGAGACGAGGATGGCGGCGGCCAGGCCGCTGCATCCACACAGCCTGTaGAGCTCCCCAGTGATGGCG +
Preference number: 2 (lower is better)
Translates to: RVACMRSRETRMAAARPLHPHSL*SSPVMA
Trigger: CGCCATCACTGGGGAGCTCCACAGGCTGTGTGGATG...CAGCGGCCTGGCCGCCGCCATCCTCGTCTCTCTGCTCCTCATGCAAGCCACGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000171584.2
3UTR CAA 90 bp AGACAGCCAGTGAGCGAGCCACCAATCAGCACCGTTGCGCGTGGCTaGCATGAGGAGCAGAGAGACGAGGATGGCGGCGGCCAGGCCGCT +
Preference number: 2 (lower is better)
Translates to: RQPVSEPPISTVARG*HEEQRDEDGGGQAA
Trigger: AGCGGCCTGGCCGCCGCCATCCTCGTCTCTCTGCTCCTCATGCAAGCCACGCGCAACGGTGCTGATTGGTGGCTCGCTCACTGGCTGTCT
66% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000171584.2
3UTR-3UTR CCA 90 bp TCCACCACCCTCCCGGCTTGGAGCACCAGCACACGGTCAGAGTTTAGGATCGTGGCAGAGAGACGAGGATaGCGGCGGCCAGGCCGCTGC +
Preference number: 2 (lower is better)
Translates to: STTLPAWSTSTRSEFRIVAERRG*RRPGRC
Trigger: GCAGCGGCCTGGCCGCCGCCATCCTCGTCTCTCTGC...CACGATCCTAAACTCTGACCGTGTGCTGGTGCTCCAAGCCGGGAGGGTGGTGGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000171584.2
3UTR-3UTR TCA 90 bp CGCGTGGCTTGCATGAGGAGCAGAGAGACGAGGATGGCGGCGGCCAGGCCGCTGAGATGGGGACTGGCCTaGGGTAGCCACTTGTTCCTT +
Preference number: 2 (lower is better)
Translates to: RVACMRSRETRMAAARPLRWGLA*GSHLFL
Trigger: AAGGAACAAGTGGCTACCTCAGGCCAGTCCCCATCT...CAGCGGCCTGGCCGCCGCCATCCTCGTCTCTCTGCTCCTCATGCAAGCCACGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000171584.2
3UTR-3UTR GCA 90 bp GCTGCCCATGGCCCTCCAGTATGCTCGGTAGACGTGCAGGGCTACGGCGCCCTCCGGTCCCCCAGAGCCTaGTCCCACCTGAAGAATTTG +
Preference number: 2 (lower is better)
Translates to: AAHGPPVCSVDVQGYGALRSPRA*SHLKNL
Trigger: CAAATTCTTCAGGTGGGAGCAGGCTCTGGGGGACCG...GAGGGCGCCGTAGCCCTGCACGTCTACCGAGCATACTGGAGGGCCATGGGCAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000171584.2
3UTR-3UTR GCA 90 bp CGCGTGGCTTGCATGAGGAGCAGAGAGACGAGGATGGCGGCGGCCAGGCCGCTGCCACCTTTCCCACGATaGCCACCAGCATACCCTTTT +
Preference number: 2 (lower is better)
Translates to: RVACMRSRETRMAAARPLPPFPR*PPAYPF
Trigger: AAAAGGGTATGCTGGTGGGCATCGTGGGAAAGGTGG...CAGCGGCCTGGCCGCCGCCATCCTCGTCTCTCTGCTCCTCATGCAAGCCACGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000171584.2
3UTR-3UTR GCA 90 bp GTACCAGCGGCAGGATCTCAGAGGGAGGCCCTGTTCGGACCAATTGCCCGGCTTCCAGAGACGTGGGTCTaGTGCTTTGCTGGGCTCCAG +
Preference number: 2 (lower is better)
Translates to: VPAAGSQREALFGPIARLPETWV*CFAGLQ
Trigger: CTGGAGCCCAGCAAAGCAGCAGACCCACGTCTCTGG...AAGCCGGGCAATTGGTCCGAACAGGGCCTCCCTCTGAGATCCTGCCGCTGGTAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000171584.2
3UTR-3UTR GCA 90 bp AGTGCGGTGGGTGCACAGCAGCCGGGTGGTGTGGCTCAGCACTCCCAGGATGCACAAGTCCTCTGGCTGTaGTCAGAGGCTCTCCTAGAC +
Preference number: 2 (lower is better)
Translates to: SAVGAQQPGGVAQHSQDAQVLWL*SEALLD
Trigger: GTCTAGGAGAGCCTCTGAGCACAGCCAGAGGACTTG...TGCATCCTGGGAGTGCTGAGCCACACCACCCGGCTGCTGTGCACCCACCGCACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000171584.2
3UTR-3UTR CCA 90 bp CCAGGAGTGGTTTTCATGAGGAAGCCAGGGTGCTGTGTCCCCTCTGAGCACGTGATAGACCAGCAGCCCTaGCGGGTGGGCGGGAAGGAG +
Preference number: 2 (lower is better)
Translates to: PGVVFMRKPGCCVPSEHVIDQQP*RVGGKE
Trigger: CTCCTTCCCGCCCACCCGCCAGGGCTGCTGGTCTAT...CACGTGCTCAGAGGGGACACAGCACCCTGGCTTCCTCATGAAAACCACTCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
ENSMUST00000171584.2
3UTR-3UTR CCA 90 bp AGTGCGGTGGGTGCACAGCAGCCGGGTGGTGTGGCTCAGCACTCCCAGGATGCAGGATGTTGTCTCGGATaGTGGCACACTGGATCCAGG +
Preference number: 2 (lower is better)
Translates to: SAVGAQQPGGVAQHSQDAGCCLG*WHTGSR
Trigger: CCTGGATCCAGTGTGCCACCATCCGAGACAACATCC...TGCATCCTGGGAGTGCTGAGCCACACCACCCGGCTGCTGTGCACCCACCGCACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000171584.2
3UTR-3UTR CCA 90 bp GGCAGGATCTCAGAGGGAGGCCCTGTTCGGACCAATTGCCCGGCTTCCATCAACTGCACAGCAGCCGGGTaGTGTGGCTCAGCACTCCCA +
Preference number: 2 (lower is better)
Translates to: GRISEGGPVRTNCPASINCTAAG*CGSALP
Trigger: TGGGAGTGCTGAGCCACACCACCCGGCTGCTGTGCA...GTTGATGGAAGCCGGGCAATTGGTCCGAACAGGGCCTCCCTCTGAGATCCTGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000171584.2
3UTR CAA 90 bp GTGGTGTGGCTCAGCACTCCCAGGATGCACCTGTGTAACAGGTGGTaGGCCACATCTGCATCCACAGCAGCCAGAGGGTCGTCGAGGAGA +
Preference number: 2 (lower is better)
Translates to: VVWLSTPRMHLCNRW*ATSASTAARGSSRR
Trigger: TCTCCTCGACGACCCTCTGGCTGCTGTGGATGCAGATGTGGCCAACCACCTGTTACACAGGTGCATCCTGGGAGTGCTGAGCCACACCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000171584.2
3UTR-3UTR GCA 90 bp GGCAGGATCTCAGAGGGAGGCCCTGTTCGGACCAATTGCCCGGCTTCCATCAACTTTCCAGGTACTCAGTaGGGTGGGTGCACAGCAGCC +
Preference number: 2 (lower is better)
Translates to: GRISEGGPVRTNCPASINFPGTQ*GGCTAA
Trigger: GGCTGCTGTGCACCCACCGCACTGAGTACCTGGAAA...GTTGATGGAAGCCGGGCAATTGGTCCGAACAGGGCCTCCCTCTGAGATCCTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000171584.2
3UTR-3UTR CCA 90 bp CGGGTGGTGTGGCTCAGCACTCCCAGGATGCACCTGTGTAACAGGTGGTTGGCCTCCAGGGTTCCTGGGTaGCTAGTCCAAAGCCTTTGG +
Preference number: 2 (lower is better)
Translates to: RVVWLSTPRMHLCNRWLASRVPG*LVQSLW
Trigger: CCAAAGGCTTTGGACTAGCCACCCAGGAACCCTGGA...GGCCAACCACCTGTTACACAGGTGCATCCTGGGAGTGCTGAGCCACACCACCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000171584.2
3UTR-3UTR TCA 90 bp GACCCAAGTCCTCTGGCTGTGCTCAGAGGCTCTCCTAGACCCAGGTGTCAAGGCGCCTTTGGACAGTTCTaGCACTGCCACCCATCCACA +
Preference number: 2 (lower is better)
Translates to: DPSPLAVLRGSPRPRCQGAFGQF*HCHPST
Trigger: TGTGGATGGGTGGCAGTGTCAGAACTGTCCAAAGGC...GCCTTGACACCTGGGTCTAGGAGAGCCTCTGAGCACAGCCAGAGGACTTGGGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000171584.2
3UTR-3UTR CCA 90 bp GGTCTGCTGCTTTGCTGGGCTCCAGTGCCCCAGACCTTTATTTTTGCCTTGAACATAGACCAGCAGCCCTaGCGGGTGGGCGGGAAGGAG +
Preference number: 2 (lower is better)
Translates to: GLLLCWAPVPQTFIFALNIDQQP*RVGGKE
Trigger: CTCCTTCCCGCCCACCCGCCAGGGCTGCTGGTCTAT...GTTCAAGGCAAAAATAAAGGTCTGGGGCACTGGAGCCCAGCAAAGCAGCAGACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000171584.2
3UTR-3UTR CCA 90 bp CCACACAGCCTGTGGAGCTCCCCAGTGATGGCGGCCAGCAGCGAACTCTTCCCAGTAAAAAGGCCCATGTaGGTTGGTTCTGGGGAAGTC +
Preference number: 2 (lower is better)
Translates to: PHSLWSSPVMAASSELFPVKRPM*VGSGEV
Trigger: GACTTCCCCAGAACCAACCCACATGGGCCTTTTTAC...TGGGAAGAGTTCGCTGCTGGCCGCCATCACTGGGGAGCTCCACAGGCTGTGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000171584.2
3UTR CAA 90 bp TTGTACCAGCGGCAGGATCTCAGAGGGAGGCCCTGTTCGGACCAATaGCCCGGCTTCCATCAACAGCACCACATCAGCCCTTTCCAGGTA +
Preference number: 2 (lower is better)
Translates to: LYQRQDLRGRPCSDQ*PGFHQQHHISPFQV
Trigger: TACCTGGAAAGGGCTGATGTGGTGCTGTTGATGGAAGCCGGGCAATTGGTCCGAACAGGGCCTCCCTCTGAGATCCTGCCGCTGGTACAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000171584.2
3UTR-3UTR GCA 90 bp TCGGTGGTTCTCTCCAGGTCGCATACAGATGGGGACTGGCCTGAGGTAGCCACTGAAGGTCTTCTGGCTTaGTCCAATTGGGTCCCAGGA +
Preference number: 2 (lower is better)
Translates to: SVVLSRSHTDGDWPEVATEGLLA*SNWVPG
Trigger: TCCTGGGACCCAATTGGAGCAAGCCAGAAGACCTTC...AGTGGCTACCTCAGGCCAGTCCCCATCTGTATGCGACCTGGAGAGAACCACCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000171584.2
3UTR CAA 90 bp ACTGGCAGGGCAGCCCAGAGGTACACACAGGCTGCATCCAAGTATTaGATAACACGGAGTCGTCCCAGCTCTTTAGTCCGGCAAGCCTTC +
Preference number: 2 (lower is better)
Translates to: TGRAAQRYTQAASKY*ITRSRPSSLVRQAF
Trigger: GAAGGCTTGCCGGACTAAAGAGCTGGGACGACTCCGTGTTATCAAATACTTGGATGCAGCCTGTGTGTACCTCTGGGCTGCCCTGCCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000171584.2
3UTR-3UTR TCA 90 bp GTCCAAAGCCTTTGGACAGTTCTGACACTGCCACCCATCCACACAGCCTGTGGAACCGGCCCCGAATTCTaGGTAAAAAGGCCCATGTGG +
Preference number: 2 (lower is better)
Translates to: VQSLWTVLTLPPIHTACGTGPEF*VKRPMW
Trigger: CCACATGGGCCTTTTTACTCAGAATTCGGGGCCGGT...TCCACAGGCTGTGTGGATGGGTGGCAGTGTCAGAACTGTCCAAAGGCTTTGGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000171584.2
3UTR-3UTR CCA 90 bp GGAGTGGTTTTCATGAGGAAGCCAGGGTGCTGTGTCCCCTCTGAGCACGTGAGAGTAAAAAGGCCCATGTaGGTTGGTTCTGGGGAAGTC +
Preference number: 2 (lower is better)
Translates to: GVVFMRKPGCCVPSEHVRVKRPM*VGSGEV
Trigger: GACTTCCCCAGAACCAACCCACATGGGCCTTTTTAC...TCTCACGTGCTCAGAGGGGACACAGCACCCTGGCTTCCTCATGAAAACCACTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
ENSMUST00000171584.2
3UTR-3UTR CCA 90 bp GACCAATTGCCCGGCTTCCATCAACAGCACCACATCAGCCCTTTCCAGGTACTCAGATCGAGGAAACGCTaGATCCGGTCCAGGGATACT +
Preference number: 2 (lower is better)
Translates to: DQLPGFHQQHHISPFQVLRSRKR*IRSRDT
Trigger: AGTATCCCTGGACCGGATCCAGCGTTTCCTCGATCT...GAGTACCTGGAAAGGGCTGATGTGGTGCTGTTGATGGAAGCCGGGCAATTGGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000171584.2
3UTR-3UTR CCA 90 bp GTGCTCTGTTCCACCTCCAACTCCTCCTCGGTGGTTCTCTCCAGGTCGCATACACTGATGAAGGTCTTCTaGCTTGCTCCAATTGGGTCC +
Preference number: 2 (lower is better)
Translates to: VLCSTSNSSSVVLSRSHTLMKVF*LAPIGS
Trigger: GGACCCAATTGGAGCAAGCCAGAAGACCTTCATCAG...TGTATGCGACCTGGAGAGAACCACCGAGGAGGAGTTGGAGGTGGAACAGAGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000171584.2
3UTR CAA 90 bp CAAGCCTTCACTCGGTCCCCCAGAGCCTGCTCCCACCTGAAGAATTaGATGACTCGAATGCCACTCAGTAACTCTGTCATGAGCTGGAGA +
Preference number: 2 (lower is better)
Translates to: QAFTRSPRACSHLKN*MTRMPLSNSVMSWR
Trigger: TCTCCAGCTCATGACAGAGTTACTGAGTGGCATTCGAGTCATCAAATTCTTCAGGTGGGAGCAGGCTCTGGGGGACCGAGTGAAGGCTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000171584.2
3UTR-3UTR CCA 90 bp GTCGTCGAGGAGATAGAGTGCTTTCTCCTAGACAGAATGGACAGCAGGCACCATTGGATCCAGGGTTCCTaGGTGGCTAGTCCAAAGCCT +
Preference number: 2 (lower is better)
Translates to: VVEEIECFLLDRMDSRHHWIQGS*VASPKP
Trigger: AGGCTTTGGACTAGCCACCCAGGAACCCTGGATCCA...ATGGTGCCTGCTGTCCATTCTGTCTAGGAGAAAGCACTCTATCTCCTCGACGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000171584.2
3UTR CAA 90 bp AGGGATACTTTGGATTCCAAGAGACCATTGATCACCCAGGGGAAGTaGTTGAGAGGAAGAATGAGCATGCGCACAAGCGCCAGCGCTGTA +
Preference number: 2 (lower is better)
Translates to: RDTLDSKRPLITQGK*LRGRMSMRTSASAV
Trigger: TACAGCGCTGGCGCTTGTGCGCATGCTCATTCTTCCTCTCAACAACTTCCCCTGGGTGATCAATGGTCTCTTGGAATCCAAAGTATCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000171584.2
3UTR CAA 90 bp AAACGCTGGATCCGGTCCAGGGATACTTTGGATTCCAAGAGACCATaGATCACCCAGGGGAAGTTGTTGAGAGGAAGAATGAGCATGCGC +
Preference number: 2 (lower is better)
Translates to: KRWIRSRDTLDSKRP*ITQGKLLRGRMSMR
Trigger: GCGCATGCTCATTCTTCCTCTCAACAACTTCCCCTGGGTGATCAATGGTCTCTTGGAATCCAAAGTATCCCTGGACCGGATCCAGCGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000171584.2
3UTR-3UTR TCA 90 bp GTCGTCGAGGAGATAGAGTGCTTTCTCCTAGACAGAATGGACAGCAGGCACCATTCAGTAACTCTGTCATaGGCTGGAGACAGGGACAGA +
Preference number: 2 (lower is better)
Translates to: VVEEIECFLLDRMDSRHHSVTLS*AGDRDR
Trigger: TCTGTCCCTGTCTCCAGCTCATGACAGAGTTACTGA...ATGGTGCCTGCTGTCCATTCTGTCTAGGAGAAAGCACTCTATCTCCTCGACGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000171584.2
3UTR-3UTR GCA 90 bp GTGCTCTGTTCCACCTCCAACTCCTCCTCGGTGGTTCTCTCCAGGTCGCATACACCAGACCTTTATTTTTaGCTTGAACCTGGTAGACAG +
Preference number: 2 (lower is better)
Translates to: VLCSTSNSSSVVLSRSHTPDLYF*LEPGRQ
Trigger: CTGTCTACCAGGTTCAAGGCAAAAATAAAGGTCTGG...TGTATGCGACCTGGAGAGAACCACCGAGGAGGAGTTGGAGGTGGAACAGAGCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000171584.2
3UTR-3UTR CCA 90 bp CTTGGTGGCAGTGAGCTGGTGCCCCATGAGGACATAGGTGATGAAGATGGTGATAACTCTGTCATGAGCTaGAGACAGGGACAGAAGAGT +
Preference number: 2 (lower is better)
Translates to: LGGSELVPHEDIGDEDGDNSVMS*RQGQKS
Trigger: ACTCTTCTGTCCCTGTCTCCAGCTCATGACAGAGTT...ATCACCATCTTCATCACCTATGTCCTCATGGGGCACCAGCTCACTGCCACCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000171584.2
3UTR-3UTR TCA 90 bp GAGGAGATAGAGTGCTTTCTCCTAGACAGAATGGACAGCAGGCACCATGACCCAATTCCAAGAGACCATTaGTCACCCAGGGGAAGTTGT +
Preference number: 2 (lower is better)
Translates to: EEIECFLLDRMDSRHHDPIPRDH*SPRGSC
Trigger: ACAACTTCCCCTGGGTGATCAATGGTCTCTTGGAAT...TGGGTCATGGTGCCTGCTGTCCATTCTGTCTAGGAGAAAGCACTCTATCTCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000171584.2
3UTR-3UTR TCA 90 bp GTCGTCGAGGAGATAGAGTGCTTTCTCCTAGACAGAATGGACAGCAGGCACCATTTTTTCACTTGGAGGTaGCTGATGAAGGTCTTCTGG +
Preference number: 2 (lower is better)
Translates to: VVEEIECFLLDRMDSRHHFFTWR*LMKVFW
Trigger: CCAGAAGACCTTCATCAGTCACCTCCAAGTGAAAAA...ATGGTGCCTGCTGTCCATTCTGTCTAGGAGAAAGCACTCTATCTCCTCGACGAC
49% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENSMUST00000171584.2
3UTR GCA 72 bp GGAGCAGAGAGACGAGGATGGCGGCGGCCAGGCCGCTaGCCATGGCCCTCCAGTATGCTCGGTAGACGTGCA +
Preference number: 3 (lower is better)
Translates to: GAERRGWRRPGR*PWPSSMLGRRA
Trigger: TGCACGTCTACCGAGCATACTGGAGGGCCATGGGCAGCGGCCTGGCCGCCGCCATCCTCGTCTCTCTGCTCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000171584.2
3UTR TCA 72 bp CGAGCCACCAATCAGCACCGTTGCGCGTGGCTTGCATaGGGAGCAGAGAGACGAGGATGGCGGCGGCCAGGC +
Preference number: 3 (lower is better)
Translates to: RATNQHRCAWLA*GAERRGWRRPG
Trigger: GCCTGGCCGCCGCCATCCTCGTCTCTCTGCTCCTCATGCAAGCCACGCGCAACGGTGCTGATTGGTGGCTCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000171584.2
3UTR GCA 72 bp GAGGCTCAGCACCCTGAAGGTCCGGAGTGGGCTCCCTaGTGGCTGCTCTGCAGGAGCTGCTGGAACAGGGAG +
Preference number: 3 (lower is better)
Translates to: EAQHPEGPEWAP*WLLCRSCWNRE
Trigger: CTCCCTGTTCCAGCAGCTCCTGCAGAGCAGCCAGCAGGGAGCCCACTCCGGACCTTCAGGGTGCTGAGCCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000171584.2
3UTR GCA 72 bp CCACATCAGCCCTTTCCAGGTACTCAGTGCGGTGGGTaGACAGCAGCCGGGTGGTGTGGCTCAGCACTCCCA +
Preference number: 3 (lower is better)
Translates to: PHQPFPGTQCGG*TAAGWCGSALP
Trigger: TGGGAGTGCTGAGCCACACCACCCGGCTGCTGTGCACCCACCGCACTGAGTACCTGGAAAGGGCTGATGTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000171584.2
3UTR GCA 72 bp TGCAGGGCTACGGCGCCCTCGCTTTTGCTTTCCTCCTaGACGAGGCAGCCGCATGTGCTCTGTTCCACCTCC +
Preference number: 3 (lower is better)
Translates to: CRATAPSLLLSS*TRQPHVLCSTS
Trigger: GGAGGTGGAACAGAGCACATGCGGCTGCCTCGTGCAGGAGGAAAGCAAAAGCGAGGGCGCCGTAGCCCTGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000171584.2
3UTR GCA 72 bp CTCGGTAGACGTGCAGGGCTACGGCGCCCTCGCTTTTaGTTTCCTCCTGCACGAGGCAGCCGCATGTGCTCT +
Preference number: 3 (lower is better)
Translates to: LGRRAGLRRPRF*FPPARGSRMCS
Trigger: AGAGCACATGCGGCTGCCTCGTGCAGGAGGAAAGCAAAAGCGAGGGCGCCGTAGCCCTGCACGTCTACCGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000171584.2
3UTR CCA 72 bp GGTAGAAGCACAGAGGAAAACATAGACCAGCAGCCCTaGCGGGTGGGCGGGAAGGAGCATGGACCCCAGGGG +
Preference number: 3 (lower is better)
Translates to: GRSTEENIDQQP*RVGGKEHGPQG
Trigger: CCCCTGGGGTCCATGCTCCTTCCCGCCCACCCGCCAGGGCTGCTGGTCTATGTTTTCCTCTGTGCTTCTACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
ENSMUST00000171584.2
3UTR GCA 72 bp GGCTGCAGGAAGCTGGATCCTCCCTGGATCCATTTCTaGCGGCCTTCAGCTGAGACAGCCAGTGAGCGAGCC +
Preference number: 3 (lower is better)
Translates to: GCRKLDPPWIHF*RPSAETASERA
Trigger: GGCTCGCTCACTGGCTGTCTCAGCTGAAGGCCGGCAGAAATGGATCCAGGGAGGATCCAGCTTCCTGCAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000171584.2
3UTR CCA 72 bp AGCACCACATCAGCCCTTTCCAGGTACTCAGTGCGGTaGGTGCACAGCAGCCGGGTGGTGTGGCTCAGCACT +
Preference number: 3 (lower is better)
Translates to: STTSALSRYSVR*VHSSRVVWLST
Trigger: AGTGCTGAGCCACACCACCCGGCTGCTGTGCACCCACCGCACTGAGTACCTGGAAAGGGCTGATGTGGTGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000171584.2
3UTR CCA 72 bp CTGTGGAGCCTGGGCTGCAGGAAGCTGGATCCTCCCTaGATCCATTTCTGCCGGCCTTCAGCTGAGACAGCC +
Preference number: 3 (lower is better)
Translates to: LWSLGCRKLDPP*IHFCRPSAETA
Trigger: GGCTGTCTCAGCTGAAGGCCGGCAGAAATGGATCCAGGGAGGATCCAGCTTCCTGCAGCCCAGGCTCCACAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000171584.2
3UTR CCA 72 bp GCTGAGGGGGAGTCCAGTTCCACCACCCTCCCGGCTTaGAGCACCAGCACACGGTCAGAGTTTAGGATCGTG +
Preference number: 3 (lower is better)
Translates to: AEGESSSTTLPA*STSTRSEFRIV
Trigger: CACGATCCTAAACTCTGACCGTGTGCTGGTGCTCCAAGCCGGGAGGGTGGTGGAACTGGACTCCCCCTCAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000171584.2
3UTR-3UTR CAA 90 bp CCACACAGCCTGTGGAGCTCCCCAGTGATGGCGGCCAGCAGCGAACTCTTCCCACCTCAGGGCTGTAGCTaGGAAGATCGAGGAAACGCT +
Preference number: 3 (lower is better)
Translates to: PHSLWSSPVMAASSELFPPQGCS*EDRGNA
Trigger: AGCGTTTCCTCGATCTTCCAAGCTACAGCCCTGAGG...TGGGAAGAGTTCGCTGCTGGCCGCCATCACTGGGGAGCTCCACAGGCTGTGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000171584.2
3UTR CCA 72 bp GGAGAAGAGTGCTGTGGAGCCTGGGCTGCAGGAAGCTaGATCCTCCCTGGATCCATTTCTGCCGGCCTTCAG +
Preference number: 3 (lower is better)
Translates to: GEECCGAWAAGS*ILPGSISAGLQ
Trigger: CTGAAGGCCGGCAGAAATGGATCCAGGGAGGATCCAGCTTCCTGCAGCCCAGGCTCCACAGCACTCTTCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000171584.2
3UTR CCA 72 bp GAGAAGCAGCCGTGGGGAGAAGAGTGCTGTGGAGCCTaGGCTGCAGGAAGCTGGATCCTCCCTGGATCCATT +
Preference number: 3 (lower is better)
Translates to: EKQPWGEECCGA*AAGSWILPGSI
Trigger: AATGGATCCAGGGAGGATCCAGCTTCCTGCAGCCCAGGCTCCACAGCACTCTTCTCCCCACGGCTGCTTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000171584.2
3UTR GCA 72 bp TGGACAGCAGGCACCATGACCCAAGTCCTCTGGCTGTaGTCAGAGGCTCTCCTAGACCCAGGTGTCAAGGCA +
Preference number: 3 (lower is better)
Translates to: WTAGTMTQVLWL*SEALLDPGVKA
Trigger: TGCCTTGACACCTGGGTCTAGGAGAGCCTCTGAGCACAGCCAGAGGACTTGGGTCATGGTGCCTGCTGTCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000171584.2
3UTR GCA 72 bp GGCAGGATCTCAGAGGGAGGCCCTGTTCGGACCAATTaGCCGGCTTCCATCAACAGCACCACATCAGCCCTT +
Preference number: 3 (lower is better)
Translates to: GRISEGGPVRTN*PASINSTTSAL
Trigger: AAGGGCTGATGTGGTGCTGTTGATGGAAGCCGGGCAATTGGTCCGAACAGGGCCTCCCTCTGAGATCCTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000171584.2
3UTR GCA 72 bp CGCTTTTGCTTTCCTCCTGCACGAGGCAGCCGCATGTaGTCTGTTCCACCTCCAACTCCTCCTCGGTGGTTC +
Preference number: 3 (lower is better)
Translates to: RFCFPPARGSRM*SVPPPTPPRWF
Trigger: GAACCACCGAGGAGGAGTTGGAGGTGGAACAGAGCACATGCGGCTGCCTCGTGCAGGAGGAAAGCAAAAGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000171584.2
3UTR CCA 72 bp CGCATGTGCTCTGTTCCACCTCCAACTCCTCCTCGGTaGTTCTCTCCAGGTCGCATACAGATGGGGACTGGC +
Preference number: 3 (lower is better)
Translates to: RMCSVPPPTPPR*FSPGRIQMGTG
Trigger: GCCAGTCCCCATCTGTATGCGACCTGGAGAGAACCACCGAGGAGGAGTTGGAGGTGGAACAGAGCACATGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000171584.2
3UTR-3UTR CAA 90 bp GAGGAGATAGAGTGCTTTCTCCTAGACAGAATGGACAGCAGGCACCATGACCCACGTGGGTCTGCTGCTTaGCTGGGCTCCAGTGCCCCA +
Preference number: 3 (lower is better)
Translates to: EEIECFLLDRMDSRHHDPRGSAA*LGSSAP
Trigger: TGGGGCACTGGAGCCCAGCAAAGCAGCAGACCCACG...TGGGTCATGGTGCCTGCTGTCCATTCTGTCTAGGAGAAAGCACTCTATCTCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000171584.2
3UTR TCA 72 bp GGTTCTCTCCAGGTCGCATACAGATGGGGACTGGCCTaGGGTAGCCACTTGTTCCTTCTCAGCCCAGGCTGT +
Preference number: 3 (lower is better)
Translates to: GSLQVAYRWGLA*GSHLFLLSPGC
Trigger: ACAGCCTGGGCTGAGAAGGAACAAGTGGCTACCTCAGGCCAGTCCCCATCTGTATGCGACCTGGAGAGAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000171584.2
3UTR CCA 72 bp GAGGTGACTGATGAAGGTCTTCTGGCTTGCTCCAATTaGGTCCCAGGAGAACAGGGCCTCGTGCAGCTCCAG +
Preference number: 3 (lower is better)
Translates to: EVTDEGLLACSN*VPGEQGLVQLQ
Trigger: CTGGAGCTGCACGAGGCCCTGTTCTCCTGGGACCCAATTGGAGCAAGCCAGAAGACCTTCATCAGTCACCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000171584.2
3UTR CCA 72 bp GGATCCAGGGTTCCTGGGTGGCTAGTCCAAAGCCTTTaGACAGTTCTGACACTGCCACCCATCCACACAGCC +
Preference number: 3 (lower is better)
Translates to: GSRVPGWLVQSL*TVLTLPPIHTA
Trigger: GGCTGTGTGGATGGGTGGCAGTGTCAGAACTGTCCAAAGGCTTTGGACTAGCCACCCAGGAACCCTGGATCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000171584.2
3UTR CCA 72 bp GGTACTTCCTCTCCACTGAGTGTGAAACCAGAGACGTaGGTCTGCTGCTTTGCTGGGCTCCAGTGCCCCAGA +
Preference number: 3 (lower is better)
Translates to: GTSSPLSVKPET*VCCFAGLQCPR
Trigger: TCTGGGGCACTGGAGCCCAGCAAAGCAGCAGACCCACGTCTCTGGTTTCACACTCAGTGGAGAGGAAGTACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000171584.2
3UTR CCA 72 bp ACAGAATGGACAGCAGGCACCATGACCCAAGTCCTCTaGCTGTGCTCAGAGGCTCTCCTAGACCCAGGTGTC +
Preference number: 3 (lower is better)
Translates to: TEWTAGTMTQVL*LCSEALLDPGV
Trigger: GACACCTGGGTCTAGGAGAGCCTCTGAGCACAGCCAGAGGACTTGGGTCATGGTGCCTGCTGTCCATTCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000171584.2
3UTR CCA 72 bp TCAGCACTCCCAGGATGCACCTGTGTAACAGGTGGTTaGCCACATCTGCATCCACAGCAGCCAGAGGGTCGT +
Preference number: 3 (lower is better)
Translates to: SALPGCTCVTGG*PHLHPQQPEGR
Trigger: ACGACCCTCTGGCTGCTGTGGATGCAGATGTGGCCAACCACCTGTTACACAGGTGCATCCTGGGAGTGCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000171584.2
3UTR-3UTR CAA 90 bp GGCAGTGAGCTGGTGCCCCATGAGGACATAGGTGATGAAGATGGTGATGCAGATAAAGGCCCATGTGGGTaGGTTCTGGGGAAGTCCCCC +
Preference number: 3 (lower is better)
Translates to: GSELVPHEDIGDEDGDADKGPCG*VLGKSP
Trigger: GGGGGACTTCCCCAGAACCAACCCACATGGGCCTTT...ATCTGCATCACCATCTTCATCACCTATGTCCTCATGGGGCACCAGCTCACTGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000171584.2
3UTR GCA 72 bp GACCACTGGCAGGGCAGCCCAGAGGTACACACAGGCTaGATCCAAGTATTTGATAACACGGAGTCGTCCCAG +
Preference number: 3 (lower is better)
Translates to: DHWQGSPEVHTG*IQVFDNTESSQ
Trigger: CTGGGACGACTCCGTGTTATCAAATACTTGGATGCAGCCTGTGTGTACCTCTGGGCTGCCCTGCCAGTGGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000171584.2
3UTR GCA 72 bp GCAGCGAACTCTTCCCACAGCCCACCTTTCCCACGATaGCCACCAGCATACCCTTTTTCACTTGGAGGTGAC +
Preference number: 3 (lower is better)
Translates to: AANSSHSPPFPR*PPAYPFSLGGD
Trigger: GTCACCTCCAAGTGAAAAAGGGTATGCTGGTGGGCATCGTGGGAAAGGTGGGCTGTGGGAAGAGTTCGCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000171584.2
3UTR CCA 72 bp GGGATCAGGACTGTAATAGGCCTCAGGGCTGTAGCTTaGAAGATCGAGGAAACGCTGGATCCGGTCCAGGGA +
Preference number: 3 (lower is better)
Translates to: GIRTVIGLRAVA*KIEETLDPVQG
Trigger: TCCCTGGACCGGATCCAGCGTTTCCTCGATCTTCCAAGCTACAGCCCTGAGGCCTATTACAGTCCTGATCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000171584.2
3UTR CCA 72 bp CTCGGATGGTGGCACACTGGATCCAGGGTTCCTGGGTaGCTAGTCCAAAGCCTTTGGACAGTTCTGACACTG +
Preference number: 3 (lower is better)
Translates to: LGWWHTGSRVPG*LVQSLWTVLTL
Trigger: CAGTGTCAGAACTGTCCAAAGGCTTTGGACTAGCCACCCAGGAACCCTGGATCCAGTGTGCCACCATCCGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000171584.2
3UTR-3UTR CAA 90 bp GTGCTCTGTTCCACCTCCAACTCCTCCTCGGTGGTTCTCTCCAGGTCGCATACATTCCCAAAGAGGATGTaGTCTCGGATGGTGGCACAC +
Preference number: 3 (lower is better)
Translates to: VLCSTSNSSSVVLSRSHTFPKRM*SRMVAH
Trigger: GTGTGCCACCATCCGAGACAACATCCTCTTTGGGAA...TGTATGCGACCTGGAGAGAACCACCGAGGAGGAGTTGGAGGTGGAACAGAGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000171584.2
3UTR CCA 72 bp GACATAGGTGATGAAGATGGTGATGCAGATGACCACTaGCAGGGCAGCCCAGAGGTACACACAGGCTGCATC +
Preference number: 3 (lower is better)
Translates to: DIGDEDGDADDH*QGSPEVHTGCI
Trigger: GATGCAGCCTGTGTGTACCTCTGGGCTGCCCTGCCAGTGGTCATCTGCATCACCATCTTCATCACCTATGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000171584.2
3UTR CCA 72 bp TTGTCTCGGATGGTGGCACACTGGATCCAGGGTTCCTaGGTGGCTAGTCCAAAGCCTTTGGACAGTTCTGAC +
Preference number: 3 (lower is better)
Translates to: LSRMVAHWIQGS*VASPKPLDSSD
Trigger: GTCAGAACTGTCCAAAGGCTTTGGACTAGCCACCCAGGAACCCTGGATCCAGTGTGCCACCATCCGAGACAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000171584.2
3UTR-3UTR CAA 90 bp GTGCTCTGTTCCACCTCCAACTCCTCCTCGGTGGTTCTCTCCAGGTCGCATACAATACTTAGATCATCATaGAGGGCGCAGGCCTCCAGA +
Preference number: 3 (lower is better)
Translates to: VLCSTSNSSSVVLSRSHTILRSS*RAQASR
Trigger: TCTGGAGGCCTGCGCCCTCAATGATGATCTAAGTAT...TGTATGCGACCTGGAGAGAACCACCGAGGAGGAGTTGGAGGTGGAACAGAGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000171584.2
3UTR GCA 72 bp TTTCACTTGGAGGTGACTGATGAAGGTCTTCTGGCTTaGTCCAATTGGGTCCCAGGAGAACAGGGCCTCGTG +
Preference number: 3 (lower is better)
Translates to: FHLEVTDEGLLA*SNWVPGEQGLV
Trigger: CACGAGGCCCTGTTCTCCTGGGACCCAATTGGAGCAAGCCAGAAGACCTTCATCAGTCACCTCCAAGTGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000171584.2
3UTR GCA 72 bp ACTGAGTGTGAAACCAGAGACGTGGGTCTGCTGCTTTaGTGGGCTCCAGTGCCCCAGACCTTTATTTTTGCC +
Preference number: 3 (lower is better)
Translates to: TECETRDVGLLL*WAPVPQTFIFA
Trigger: GGCAAAAATAAAGGTCTGGGGCACTGGAGCCCAGCAAAGCAGCAGACCCACGTCTCTGGTTTCACACTCAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000171584.2
3UTR GCA 72 bp TCTCCACTGAGTGTGAAACCAGAGACGTGGGTCTGCTaGTTTGCTGGGCTCCAGTGCCCCAGACCTTTATTT +
Preference number: 3 (lower is better)
Translates to: SPLSVKPETWVC*FAGLQCPRPLF
Trigger: AAATAAAGGTCTGGGGCACTGGAGCCCAGCAAAGCAGCAGACCCACGTCTCTGGTTTCACACTCAGTGGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000171584.2
3UTR GCA 72 bp ATCCACAGCAGCCAGAGGGTCGTCGAGGAGATAGAGTaGTTTCTCCTAGACAGAATGGACAGCAGGCACCAT +
Preference number: 3 (lower is better)
Translates to: IHSSQRVVEEIE*FLLDRMDSRHH
Trigger: ATGGTGCCTGCTGTCCATTCTGTCTAGGAGAAAGCACTCTATCTCCTCGACGACCCTCTGGCTGCTGTGGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000171584.2
3UTR-3UTR CAA 90 bp TCGGTGGTTCTCTCCAGGTCGCATACAGATGGGGACTGGCCTGAGGTAGCCACTACCTTTATTTTTGCCTaGAACCTGGTAGACAGCACG +
Preference number: 3 (lower is better)
Translates to: SVVLSRSHTDGDWPEVATTFIFA*NLVDST
Trigger: CGTGCTGTCTACCAGGTTCAAGGCAAAAATAAAGGT...AGTGGCTACCTCAGGCCAGTCCCCATCTGTATGCGACCTGGAGAGAACCACCGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000171584.2
3UTR TCA 72 bp TCTGGTCTCCAGCAGGCAGGATACTTAGATCATCATTaGGGGCGCAGGCCTCCAGAACCTCCCTGTATAGTT +
Preference number: 3 (lower is better)
Translates to: SGLQQAGYLDHH*GRRPPEPPCIV
Trigger: AACTATACAGGGAGGTTCTGGAGGCCTGCGCCCTCAATGATGATCTAAGTATCCTGCCTGCTGGAGACCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000171584.2
3UTR-3UTR CAA 90 bp CTTGGTGGCAGTGAGCTGGTGCCCCATGAGGACATAGGTGATGAAGATGGTGATTCCCACCTGAAGAATTaGATGACTCGAATGCCACTC +
Preference number: 3 (lower is better)
Translates to: LGGSELVPHEDIGDEDGDSHLKN*MTRMPL
Trigger: GAGTGGCATTCGAGTCATCAAATTCTTCAGGTGGGA...ATCACCATCTTCATCACCTATGTCCTCATGGGGCACCAGCTCACTGCCACCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000171584.2
3UTR TCA 72 bp ACGATGCCCACCAGCATACCCTTTTTCACTTGGAGGTaGCTGATGAAGGTCTTCTGGCTTGCTCCAATTGGG +
Preference number: 3 (lower is better)
Translates to: TMPTSIPFFTWR*LMKVFWLAPIG
Trigger: CCCAATTGGAGCAAGCCAGAAGACCTTCATCAGTCACCTCCAAGTGAAAAAGGGTATGCTGGTGGGCATCGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000171584.2
3UTR-3UTR CAA 90 bp GGTCTGCTGCTTTGCTGGGCTCCAGTGCCCCAGACCTTTATTTTTGCCTTGAACCATACCCTTTTTCACTaGGAGGTGACTGATGAAGGT +
Preference number: 3 (lower is better)
Translates to: GLLLCWAPVPQTFIFALNHTLFH*EVTDEG
Trigger: ACCTTCATCAGTCACCTCCAAGTGAAAAAGGGTATG...GTTCAAGGCAAAAATAAAGGTCTGGGGCACTGGAGCCCAGCAAAGCAGCAGACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000171584.2
3UTR CCA 72 bp ACTGTCTTGTTGGCAAAGCGTTTACAGATGGTTTGCTaGAGCAGCTGGTCTGTTAGAGGTTTCCAGGGGAGA +
Preference number: 3 (lower is better)
Translates to: TVLLAKRLQMVC*SSWSVRGFQGR
Trigger: TCTCCCCTGGAAACCTCTAACAGACCAGCTGCTCCAGCAAACCATCTGTAAACGCTTTGCCAACAAGACAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000171584.2
3UTR CCA 72 bp TGGTCAGCACTGTCTTGTTGGCAAAGCGTTTACAGATaGTTTGCTGGAGCAGCTGGTCTGTTAGAGGTTTCC +
Preference number: 3 (lower is better)
Translates to: WSALSCWQSVYR*FAGAAGLLEVS
Trigger: GGAAACCTCTAACAGACCAGCTGCTCCAGCAAACCATCTGTAAACGCTTTGCCAACAAGACAGTGCTGACCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000171584.2
CDS-3UTR CCA 90 bp CGCGTGGCTTGCATGAGGAGCAGAGAGACGAGGATGGCGGCGGCCAGGCCGCTGCGGTGGGAGGGCGGCTaGGCCCAAGCTTCAGGGCTT +
Preference number: 4 (lower is better)
Translates to: RVACMRSRETRMAAARPLRWEGG*AQASGL
Trigger: AAGCCCTGAAGCTTGGGCCCAGCCGCCCTCCCACCG...CAGCGGCCTGGCCGCCGCCATCCTCGTCTCTCTGCTCCTCATGCAAGCCACGCG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000171584.2
CDS-3UTR TCA 90 bp CGCGTGGCTTGCATGAGGAGCAGAGAGACGAGGATGGCGGCGGCCAGGCCGCTGAGCTGCCAGCAAAGTTaGGCAGCCTCTCGGAGTCGG +
Preference number: 4 (lower is better)
Translates to: RVACMRSRETRMAAARPLSCQQS*AASRSR
Trigger: CCGACTCCGAGAGGCTGCTCAACTTTGCTGGCAGCT...CAGCGGCCTGGCCGCCGCCATCCTCGTCTCTCTGCTCCTCATGCAAGCCACGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000171584.2
CDS-3UTR GCA 90 bp GGTAGAAGCACAGAGGAAAACATAGACCAGCAGCCCTGGCGGGTGGGCGGGAAGGCCAGGAAGGCAGGATaGAGCCTGCGGGGGAGGCGG +
Preference number: 4 (lower is better)
Translates to: GRSTEENIDQQPWRVGGKARKAG*SLRGRR
Trigger: CCGCCTCCCCCGCAGGCTGCATCCTGCCTTCCTGGC...CTTCCCGCCCACCCGCCAGGGCTGCTGGTCTATGTTTTCCTCTGTGCTTCTACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
ENSMUST00000171584.2
CDS-3UTR GCA 90 bp GGTAGAAGCACAGAGGAAAACATAGACCAGCAGCCCTGGCGGGTGGGCGGGAAGCGGCGGCCAGGCCGCTaGCCATGGCCCTCCAGTATG +
Preference number: 4 (lower is better)
Translates to: GRSTEENIDQQPWRVGGKRRPGR*PWPSSM
Trigger: CATACTGGAGGGCCATGGGCAGCGGCCTGGCCGCCG...CTTCCCGCCCACCCGCCAGGGCTGCTGGTCTATGTTTTCCTCTGTGCTTCTACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS-3UTR CCA 90 bp GGCAGGATCTCAGAGGGAGGCCCTGTTCGGACCAATTGCCCGGCTTCCATCAACACGGCGAGGAGCGCGTaGGGAAGGGCGCTGAGCACC +
Preference number: 4 (lower is better)
Translates to: GRISEGGPVRTNCPASINTARSA*GRALST
Trigger: GGTGCTCAGCGCCCTTCCCCACGCGCTCCTCGCCGT...GTTGATGGAAGCCGGGCAATTGGTCCGAACAGGGCCTCCCTCTGAGATCCTGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000171584.2
3UTR CAA 72 bp GTGAGCGAGCCACCAATCAGCACCGTTGCGCGTGGCTaGCATGAGGAGCAGAGAGACGAGGATGGCGGCGGC +
Preference number: 4 (lower is better)
Translates to: VSEPPISTVARG*HEEQRDEDGGG
Trigger: GCCGCCGCCATCCTCGTCTCTCTGCTCCTCATGCAAGCCACGCGCAACGGTGCTGATTGGTGGCTCGCTCAC
65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000171584.2
CDS-3UTR TCA 90 bp GGTAGAAGCACAGAGGAAAACATAGACCAGCAGCCCTGGCGGGTGGGCGGGAAGCCAAGTGGCAGGCACTaGGGACGGCGAGGAGCGCGT +
Preference number: 4 (lower is better)
Translates to: GRSTEENIDQQPWRVGGKPSGRH*GRRGAR
Trigger: ACGCGCTCCTCGCCGTCCTCAGTGCCTGCCACTTGG...CTTCCCGCCCACCCGCCAGGGCTGCTGGTCTATGTTTTCCTCTGTGCTTCTACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
ENSMUST00000171584.2
CDS-3UTR TCA 90 bp CGGTGGGTGCACAGCAGCCGGGTGGTGTGGCTCAGCACTCCCAGGATGCACCTGTGGCTTAGAGGCTCTTaGCCTTCCTCCAGGAAGCCC +
Preference number: 4 (lower is better)
Translates to: RWVHSSRVVWLSTPRMHLWLRGS*PSSRKP
Trigger: GGGCTTCCTGGAGGAAGGTCAAGAGCCTCTAAGCCA...CAGGTGCATCCTGGGAGTGCTGAGCCACACCACCCGGCTGCTGTGCACCCACCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000171584.2
CDS-3UTR TCA 90 bp CGCGTGGCTTGCATGAGGAGCAGAGAGACGAGGATGGCGGCGGCCAGGCCGCTGACAGCCACTCGTGCCTaGAGTGTCACTTTACGGACC +
Preference number: 4 (lower is better)
Translates to: RVACMRSRETRMAAARPLTATRA*SVTLRT
Trigger: GGTCCGTAAAGTGACACTTCAGGCACGAGTGGCTGT...CAGCGGCCTGGCCGCCGCCATCCTCGTCTCTCTGCTCCTCATGCAAGCCACGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000171584.2
CDS-3UTR GCA 90 bp GGTAGAAGCACAGAGGAAAACATAGACCAGCAGCCCTGGCGGGTGGGCGGGAAGTGGTCCCCCAGGGGCTaGCCAGCCCAACCCATAGGC +
Preference number: 4 (lower is better)
Translates to: GRSTEENIDQQPWRVGGKWSPRG*PAQPIG
Trigger: GCCTATGGGTTGGGCTGGGCAGCCCCTGGGGGACCA...CTTCCCGCCCACCCGCCAGGGCTGCTGGTCTATGTTTTCCTCTGTGCTTCTACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
ENSMUST00000171584.2
CDS-3UTR GCA 90 bp CCAGGAGTGGTTTTCATGAGGAAGCCAGGGTGCTGTGTCCCCTCTGAGCACGTGCGGCGGCCAGGCCGCTaGCCATGGCCCTCCAGTATG +
Preference number: 4 (lower is better)
Translates to: PGVVFMRKPGCCVPSEHVRRPGR*PWPSSM
Trigger: CATACTGGAGGGCCATGGGCAGCGGCCTGGCCGCCG...CACGTGCTCAGAGGGGACACAGCACCCTGGCTTCCTCATGAAAACCACTCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS-3UTR CCA 90 bp CCAGGAGTGGTTTTCATGAGGAAGCCAGGGTGCTGTGTCCCCTCTGAGCACGTGACGGCGAGGAGCGCGTaGGGAAGGGCGCTGAGCACC +
Preference number: 4 (lower is better)
Translates to: PGVVFMRKPGCCVPSEHVTARSA*GRALST
Trigger: GGTGCTCAGCGCCCTTCCCCACGCGCTCCTCGCCGT...CACGTGCTCAGAGGGGACACAGCACCCTGGCTTCCTCATGAAAACCACTCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
ENSMUST00000171584.2
CDS-3UTR TCA 90 bp AGAAGAGTGCTGTGGAGCCTGGGCTGCAGGAAGCTGGATCCTCCCTGGATCCATCCAAGTGGCAGGCACTaGGGACGGCGAGGAGCGCGT +
Preference number: 4 (lower is better)
Translates to: RRVLWSLGCRKLDPPWIHPSGRH*GRRGAR
Trigger: ACGCGCTCCTCGCCGTCCTCAGTGCCTGCCACTTGG...ATGGATCCAGGGAGGATCCAGCTTCCTGCAGCCCAGGCTCCACAGCACTCTTCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000171584.2
CDS-3UTR GCA 90 bp GGAGTGGTTTTCATGAGGAAGCCAGGGTGCTGTGTCCCCTCTGAGCACGTGAGAGCCAGGAAGGCAGGATaGAGCCTGCGGGGGAGGCGG +
Preference number: 4 (lower is better)
Translates to: GVVFMRKPGCCVPSEHVRARKAG*SLRGRR
Trigger: CCGCCTCCCCCGCAGGCTGCATCCTGCCTTCCTGGC...TCTCACGTGCTCAGAGGGGACACAGCACCCTGGCTTCCTCATGAAAACCACTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
ENSMUST00000171584.2
CDS-3UTR GCA 90 bp GGTAGAAGCACAGAGGAAAACATAGACCAGCAGCCCTGGCGGGTGGGCGGGAAGGGGTTGGCAAGGCCCTaGTGGTGCTGCACCAGGGCA +
Preference number: 4 (lower is better)
Translates to: GRSTEENIDQQPWRVGGKGLARP*WCCTRA
Trigger: TGCCCTGGTGCAGCACCAGCAGGGCCTTGCCAACCC...CTTCCCGCCCACCCGCCAGGGCTGCTGGTCTATGTTTTCCTCTGTGCTTCTACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS-3UTR GCA 90 bp GGTAGAAGCACAGAGGAAAACATAGACCAGCAGCCCTGGCGGGTGGGCGGGAAGTGCTGGTGGGGTGACTaGAGTGGCTGGCTGTGGGGC +
Preference number: 4 (lower is better)
Translates to: GRSTEENIDQQPWRVGGKCWWGD*SGWLWG
Trigger: GCCCCACAGCCAGCCACTGCAGTCACCCCACCAGCA...CTTCCCGCCCACCCGCCAGGGCTGCTGGTCTATGTTTTCCTCTGTGCTTCTACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS-3UTR GCA 90 bp CCAGGAGTGGTTTTCATGAGGAAGCCAGGGTGCTGTGTCCCCTCTGAGCACGTGCAGGAGCACTCGCCCTaGGTTGGGCTCCAGCAGCCG +
Preference number: 4 (lower is better)
Translates to: PGVVFMRKPGCCVPSEHVQEHSP*VGLQQP
Trigger: CGGCTGCTGGAGCCCAACGCAGGGCGAGTGCTCCTG...CACGTGCTCAGAGGGGACACAGCACCCTGGCTTCCTCATGAAAACCACTCCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS-3UTR GCA 90 bp CCAGGAGTGGTTTTCATGAGGAAGCCAGGGTGCTGTGTCCCCTCTGAGCACGTGGGGAGTGCGGCTGGTTaGGCAGGGCTGAGGGGGAGT +
Preference number: 4 (lower is better)
Translates to: PGVVFMRKPGCCVPSEHVGSAAG*AGLRGS
Trigger: ACTCCCCCTCAGCCCTGCGCAACCAGCCGCACTCCC...CACGTGCTCAGAGGGGACACAGCACCCTGGCTTCCTCATGAAAACCACTCCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS-3UTR CCA 90 bp GGTAGAAGCACAGAGGAAAACATAGACCAGCAGCCCTGGCGGGTGGGCGGGAAGGCGCTGAGCACCAGCTaGGTGAAGCAGTGGCCCGTC +
Preference number: 4 (lower is better)
Translates to: GRSTEENIDQQPWRVGGKALSTS*VKQWPV
Trigger: GACGGGCCACTGCTTCACCCAGCTGGTGCTCAGCGC...CTTCCCGCCCACCCGCCAGGGCTGCTGGTCTATGTTTTCCTCTGTGCTTCTACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
ENSMUST00000171584.2
CDS-3UTR CCA 90 bp GGTAGAAGCACAGAGGAAAACATAGACCAGCAGCCCTGGCGGGTGGGCGGGAAGCCAGGCCGCTGCCCATaGCCCTCCAGTATGCTCGGT +
Preference number: 4 (lower is better)
Translates to: GRSTEENIDQQPWRVGGKPGRCP*PSSMLG
Trigger: ACCGAGCATACTGGAGGGCCATGGGCAGCGGCCTGG...CTTCCCGCCCACCCGCCAGGGCTGCTGGTCTATGTTTTCCTCTGTGCTTCTACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS-3UTR CCA 90 bp GGTAGAAGCACAGAGGAAAACATAGACCAGCAGCCCTGGCGGGTGGGCGGGAAGGCACTCGCCCTGCGTTaGGCTCCAGCAGCCGGAAGA +
Preference number: 4 (lower is better)
Translates to: GRSTEENIDQQPWRVGGKALALR*APAAGR
Trigger: TCTTCCGGCTGCTGGAGCCCAACGCAGGGCGAGTGC...CTTCCCGCCCACCCGCCAGGGCTGCTGGTCTATGTTTTCCTCTGTGCTTCTACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS-3UTR CCA 90 bp GGTAGAAGCACAGAGGAAAACATAGACCAGCAGCCCTGGCGGGTGGGCGGGAAGAACAGGGAGTGCGGCTaGTTGCGCAGGGCTGAGGGG +
Preference number: 4 (lower is better)
Translates to: GRSTEENIDQQPWRVGGKNRECG*LRRAEG
Trigger: CCCCTCAGCCCTGCGCAACCAGCCGCACTCCCTGTT...CTTCCCGCCCACCCGCCAGGGCTGCTGGTCTATGTTTTCCTCTGTGCTTCTACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS-3UTR GCA 90 bp GGTAGAAGCACAGAGGAAAACATAGACCAGCAGCCCTGGCGGGTGGGCGGGAAGAAGGAGGAAGGATGCTaGGAGTCGGAGGCGCCAGCC +
Preference number: 4 (lower is better)
Translates to: GRSTEENIDQQPWRVGGKKEEGC*ESEAPA
Trigger: GGCTGGCGCCTCCGACTCGCAGCATCCTTCCTCCTT...CTTCCCGCCCACCCGCCAGGGCTGCTGGTCTATGTTTTCCTCTGTGCTTCTACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
ENSMUST00000171584.2
CDS-3UTR GCA 90 bp GGCAGGATCTCAGAGGGAGGCCCTGTTCGGACCAATTGCCCGGCTTCCATCAACAAGGAGGAAGGATGCTaGGAGTCGGAGGCGCCAGCC +
Preference number: 4 (lower is better)
Translates to: GRISEGGPVRTNCPASINKEEGC*ESEAPA
Trigger: GGCTGGCGCCTCCGACTCGCAGCATCCTTCCTCCTT...GTTGATGGAAGCCGGGCAATTGGTCCGAACAGGGCCTCCCTCTGAGATCCTGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000171584.2
CDS-3UTR GCA 90 bp GGTAGAAGCACAGAGGAAAACATAGACCAGCAGCCCTGGCGGGTGGGCGGGAAGACTCAGTGCGGTGGGTaGACAGCAGCCGGGTGGTGT +
Preference number: 4 (lower is better)
Translates to: GRSTEENIDQQPWRVGGKTQCGG*TAAGWC
Trigger: ACACCACCCGGCTGCTGTGCACCCACCGCACTGAGT...CTTCCCGCCCACCCGCCAGGGCTGCTGGTCTATGTTTTCCTCTGTGCTTCTACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS-3UTR GCA 90 bp GGTAGAAGCACAGAGGAAAACATAGACCAGCAGCCCTGGCGGGTGGGCGGGAAGCAGCCCGGAGAAGGGTaGAGAGGGAGTTCACCCCTG +
Preference number: 4 (lower is better)
Translates to: GRSTEENIDQQPWRVGGKQPGEG*RGSSPL
Trigger: CAGGGGTGAACTCCCTCTGCACCCTTCTCCGGGCTG...CTTCCCGCCCACCCGCCAGGGCTGCTGGTCTATGTTTTCCTCTGTGCTTCTACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS-3UTR GCA 90 bp GGTAGAAGCACAGAGGAAAACATAGACCAGCAGCCCTGGCGGGTGGGCGGGAAGGAGCACAGGGAGGCCTaGCAGGGTGTCAGCCAGATG +
Preference number: 4 (lower is better)
Translates to: GRSTEENIDQQPWRVGGKEHREA*QGVSQM
Trigger: CATCTGGCTGACACCCTGGCAGGCCTCCCTGTGCTC...CTTCCCGCCCACCCGCCAGGGCTGCTGGTCTATGTTTTCCTCTGTGCTTCTACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS-3UTR GCA 90 bp CCAGGAGTGGTTTTCATGAGGAAGCCAGGGTGCTGTGTCCCCTCTGAGCACGTGCCTGTAAGTGGCCCCTaGAGCCCGGAGCACAGGGAG +
Preference number: 4 (lower is better)
Translates to: PGVVFMRKPGCCVPSEHVPVSGP*SPEHRE
Trigger: CTCCCTGTGCTCCGGGCTGCAGGGGCCACTTACAGG...CACGTGCTCAGAGGGGACACAGCACCCTGGCTTCCTCATGAAAACCACTCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS-3UTR GCA 90 bp CCAGGAGTGGTTTTCATGAGGAAGCCAGGGTGCTGTGTCCCCTCTGAGCACGTGAGGCCCTGCTGGTGCTaGACCAGGGCAATGCCCGCA +
Preference number: 4 (lower is better)
Translates to: PGVVFMRKPGCCVPSEHVRPCWC*TRAMPA
Trigger: TGCGGGCATTGCCCTGGTGCAGCACCAGCAGGGCCT...CACGTGCTCAGAGGGGACACAGCACCCTGGCTTCCTCATGAAAACCACTCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS-3UTR GCA 90 bp CCAGGAGTGGTTTTCATGAGGAAGCCAGGGTGCTGTGTCCCCTCTGAGCACGTGGGGTTGGCAAGGCCCTaGTGGTGCTGCACCAGGGCA +
Preference number: 4 (lower is better)
Translates to: PGVVFMRKPGCCVPSEHVGLARP*WCCTRA
Trigger: TGCCCTGGTGCAGCACCAGCAGGGCCTTGCCAACCC...CACGTGCTCAGAGGGGACACAGCACCCTGGCTTCCTCATGAAAACCACTCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS-3UTR GCA 90 bp GGTAGAAGCACAGAGGAAAACATAGACCAGCAGCCCTGGCGGGTGGGCGGGAAGCTGTGCGGCCCACGATaGCCAGCTTCTCTCCAGGCT +
Preference number: 4 (lower is better)
Translates to: GRSTEENIDQQPWRVGGKLCGPR*PASLQA
Trigger: AGCCTGGAGAGAAGCTGGGCATCGTGGGCCGCACAG...CTTCCCGCCCACCCGCCAGGGCTGCTGGTCTATGTTTTCCTCTGTGCTTCTACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS-3UTR GCA 90 bp GGAGTGGTTTTCATGAGGAAGCCAGGGTGCTGTGTCCCCTCTGAGCACGTGAGAGGGAGTGCGGCTGGTTaGGCAGGGCTGAGGGGGAGT +
Preference number: 4 (lower is better)
Translates to: GVVFMRKPGCCVPSEHVRGSAAG*AGLRGS
Trigger: ACTCCCCCTCAGCCCTGCGCAACCAGCCGCACTCCC...TCTCACGTGCTCAGAGGGGACACAGCACCCTGGCTTCCTCATGAAAACCACTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS-3UTR GCA 90 bp GGTAGAAGCACAGAGGAAAACATAGACCAGCAGCCCTGGCGGGTGGGCGGGAAGTGCTGGAACAGGGAGTaGGGCTGGTTGCGCAGGGCT +
Preference number: 4 (lower is better)
Translates to: GRSTEENIDQQPWRVGGKCWNRE*GWLRRA
Trigger: AGCCCTGCGCAACCAGCCGCACTCCCTGTTCCAGCA...CTTCCCGCCCACCCGCCAGGGCTGCTGGTCTATGTTTTCCTCTGTGCTTCTACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS-3UTR CCA 90 bp GGTAGAAGCACAGAGGAAAACATAGACCAGCAGCCCTGGCGGGTGGGCGGGAAGAGCTGGGTGAAGCAGTaGCCCGTCGTGTCCCCTTCC +
Preference number: 4 (lower is better)
Translates to: GRSTEENIDQQPWRVGGKSWVKQ*PVVSPS
Trigger: GGAAGGGGACACGACGGGCCACTGCTTCACCCAGCT...CTTCCCGCCCACCCGCCAGGGCTGCTGGTCTATGTTTTCCTCTGTGCTTCTACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
ENSMUST00000171584.2
CDS-3UTR CCA 90 bp AGAAGAGTGCTGTGGAGCCTGGGCTGCAGGAAGCTGGATCCTCCCTGGATCCATCTTGGGGTGCCCAAGTaGCAGGCACTGAGGACGGCG +
Preference number: 4 (lower is better)
Translates to: RRVLWSLGCRKLDPPWIHLGVPK*QALRTA
Trigger: CGCCGTCCTCAGTGCCTGCCACTTGGGCACCCCAAG...ATGGATCCAGGGAGGATCCAGCTTCCTGCAGCCCAGGCTCCACAGCACTCTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000171584.2
CDS-3UTR CCA 90 bp GGTAGAAGCACAGAGGAAAACATAGACCAGCAGCCCTGGCGGGTGGGCGGGAAGCACAGGGCCAGGCTGTaGGTGAACCAGGCCACAGCT +
Preference number: 4 (lower is better)
Translates to: GRSTEENIDQQPWRVGGKHRARL*VNQATA
Trigger: AGCTGTGGCCTGGTTCACCCACAGCCTGGCCCTGTG...CTTCCCGCCCACCCGCCAGGGCTGCTGGTCTATGTTTTCCTCTGTGCTTCTACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
ENSMUST00000171584.2
CDS-3UTR CCA 90 bp CTGTGGAAGGGAAACCGGCCCCGAATTCTGAGTAAAAAGGCCCATGTGGGTTGGGCAGAGAGACGAGGATaGCGGCGGCCAGGCCGCTGC +
Preference number: 4 (lower is better)
Translates to: LWKGNRPRILSKKAHVGWAERRG*RRPGRC
Trigger: GCAGCGGCCTGGCCGCCGCCATCCTCGTCTCTCTGC...CCAACCCACATGGGCCTTTTTACTCAGAATTCGGGGCCGGTTTCCCTTCCACAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS-3UTR TCA 90 bp GTTTTCATGAGGAAGCCAGGGTGCTGTGTCCCCTCTGAGCACGTGAGAAGAGGTCCAAGTGGCAGGCACTaGGGACGGCGAGGAGCGCGT +
Preference number: 4 (lower is better)
Translates to: VFMRKPGCCVPSEHVRRGPSGRH*GRRGAR
Trigger: ACGCGCTCCTCGCCGTCCTCAGTGCCTGCCACTTGG...ACCTCTTCTCACGTGCTCAGAGGGGACACAGCACCCTGGCTTCCTCATGAAAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
ENSMUST00000171584.2
CDS-3UTR TCA 90 bp CCAGGAGTGGTTTTCATGAGGAAGCCAGGGTGCTGTGTCCCCTCTGAGCACGTGGGCGCCAGCCAGGATTaGGAGCTGGGGAGTGATTGG +
Preference number: 4 (lower is better)
Translates to: PGVVFMRKPGCCVPSEHVGASQD*ELGSDW
Trigger: CCAATCACTCCCCAGCTCTCAATCCTGGCTGGCGCC...CACGTGCTCAGAGGGGACACAGCACCCTGGCTTCCTCATGAAAACCACTCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
ENSMUST00000171584.2
CDS-3UTR TCA 90 bp ATGAGCATGCGCACAAGCGCCAGCGCTGTAAACACCTTGGTGGCAGTGAGCTGGGGCGCCAGCCAGGATTaGGAGCTGGGGAGTGATTGG +
Preference number: 4 (lower is better)
Translates to: MSMRTSASAVNTLVAVSWGASQD*ELGSDW
Trigger: CCAATCACTCCCCAGCTCTCAATCCTGGCTGGCGCC...CCAGCTCACTGCCACCAAGGTGTTTACAGCGCTGGCGCTTGTGCGCATGCTCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000171584.2
CDS-3UTR TCA 90 bp CTGTGGAAGGGAAACCGGCCCCGAATTCTGAGTAAAAAGGCCCATGTGGGTTGGGCGCTGCTGGTGGGGTaGCTGCAGTGGCTGGCTGTG +
Preference number: 4 (lower is better)
Translates to: LWKGNRPRILSKKAHVGWALLVG*LQWLAV
Trigger: CACAGCCAGCCACTGCAGTCACCCCACCAGCAGCGC...CCAACCCACATGGGCCTTTTTACTCAGAATTCGGGGCCGGTTTCCCTTCCACAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS-3UTR TCA 90 bp GTTTTCATGAGGAAGCCAGGGTGCTGTGTCCCCTCTGAGCACGTGAGAAGAGGTGCGCTGCTGGTGGGGTaGCTGCAGTGGCTGGCTGTG +
Preference number: 4 (lower is better)
Translates to: VFMRKPGCCVPSEHVRRGALLVG*LQWLAV
Trigger: CACAGCCAGCCACTGCAGTCACCCCACCAGCAGCGC...ACCTCTTCTCACGTGCTCAGAGGGGACACAGCACCCTGGCTTCCTCATGAAAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS-3UTR TCA 90 bp CTGTGGAAGGGAAACCGGCCCCGAATTCTGAGTAAAAAGGCCCATGTGGGTTGGCCTGGGTCAGCCAGCTaGTGCGCTGCTGGTGGGGTG +
Preference number: 4 (lower is better)
Translates to: LWKGNRPRILSKKAHVGWPGSAS*CAAGGV
Trigger: CACCCCACCAGCAGCGCATCAGCTGGCTGACCCAGG...CCAACCCACATGGGCCTTTTTACTCAGAATTCGGGGCCGGTTTCCCTTCCACAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS-3UTR GCA 90 bp GGTAGAAGCACAGAGGAAAACATAGACCAGCAGCCCTGGCGGGTGGGCGGGAAGGGAAAGGAGGAAGGATaGTGCGAGTCGGAGGCGCCA +
Preference number: 4 (lower is better)
Translates to: GRSTEENIDQQPWRVGGKGKEEG*CESEAP
Trigger: TGGCGCCTCCGACTCGCAGCATCCTTCCTCCTTTCC...CTTCCCGCCCACCCGCCAGGGCTGCTGGTCTATGTTTTCCTCTGTGCTTCTACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
ENSMUST00000171584.2
CDS-3UTR GCA 90 bp GACCCAAGTCCTCTGGCTGTGCTCAGAGGCTCTCCTAGACCCAGGTGTCAAGGCCAGCCAGGAAGGCCATaGCCACCTGCTGGTACAGCA +
Preference number: 4 (lower is better)
Translates to: DPSPLAVLRGSPRPRCQGQPGRP*PPAGTA
Trigger: TGCTGTACCAGCAGGTGGGCATGGCCTTCCTGGCTG...GCCTTGACACCTGGGTCTAGGAGAGCCTCTGAGCACAGCCAGAGGACTTGGGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000171584.2
CDS-3UTR GCA 90 bp GGTAGAAGCACAGAGGAAAACATAGACCAGCAGCCCTGGCGGGTGGGCGGGAAGTGCTTGAAGGGCGCCTaGTGCAAAGAGCACAGCCCG +
Preference number: 4 (lower is better)
Translates to: GRSTEENIDQQPWRVGGKCLKGA*CKEHSP
Trigger: CGGGCTGTGCTCTTTGCAGCAGGCGCCCTTCAAGCA...CTTCCCGCCCACCCGCCAGGGCTGCTGGTCTATGTTTTCCTCTGTGCTTCTACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS-3UTR GCA 90 bp GGAGTGGTTTTCATGAGGAAGCCAGGGTGCTGTGTCCCCTCTGAGCACGTGAGATGCTGGTGGGGTGACTaGAGTGGCTGGCTGTGGGGC +
Preference number: 4 (lower is better)
Translates to: GVVFMRKPGCCVPSEHVRCWWGD*SGWLWG
Trigger: GCCCCACAGCCAGCCACTGCAGTCACCCCACCAGCA...TCTCACGTGCTCAGAGGGGACACAGCACCCTGGCTTCCTCATGAAAACCACTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS-3UTR GCA 90 bp GGAGTGGTTTTCATGAGGAAGCCAGGGTGCTGTGTCCCCTCTGAGCACGTGAGAACTTGCCGGAGCCTGTaGGGCCCACGATGCCCAGCT +
Preference number: 4 (lower is better)
Translates to: GVVFMRKPGCCVPSEHVRTCRSL*GPRCPA
Trigger: AGCTGGGCATCGTGGGCCGCACAGGCTCCGGCAAGT...TCTCACGTGCTCAGAGGGGACACAGCACCCTGGCTTCCTCATGAAAACCACTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS-3UTR CCA 90 bp ATGAGCATGCGCACAAGCGCCAGCGCTGTAAACACCTTGGTGGCAGTGAGCTGGAGCTGGGTGAAGCAGTaGCCCGTCGTGTCCCCTTCC +
Preference number: 4 (lower is better)
Translates to: MSMRTSASAVNTLVAVSWSWVKQ*PVVSPS
Trigger: GGAAGGGGACACGACGGGCCACTGCTTCACCCAGCT...CCAGCTCACTGCCACCAAGGTGTTTACAGCGCTGGCGCTTGTGCGCATGCTCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000171584.2
CDS-3UTR CCA 90 bp GGAGTGGTTTTCATGAGGAAGCCAGGGTGCTGTGTCCCCTCTGAGCACGTGAGAGCGCTGAGCACCAGCTaGGTGAAGCAGTGGCCCGTC +
Preference number: 4 (lower is better)
Translates to: GVVFMRKPGCCVPSEHVRALSTS*VKQWPV
Trigger: GACGGGCCACTGCTTCACCCAGCTGGTGCTCAGCGC...TCTCACGTGCTCAGAGGGGACACAGCACCCTGGCTTCCTCATGAAAACCACTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
ENSMUST00000171584.2
CDS-3UTR CCA 90 bp GACCCAAGTCCTCTGGCTGTGCTCAGAGGCTCTCCTAGACCCAGGTGTCAAGGCAGGGCCCTCCACAGTTaGGCCCCCTCCTTCCAATGT +
Preference number: 4 (lower is better)
Translates to: DPSPLAVLRGSPRPRCQGRALHS*APSFQC
Trigger: ACATTGGAAGGAGGGGGCCCAACTGTGGAGGGCCCT...GCCTTGACACCTGGGTCTAGGAGAGCCTCTGAGCACAGCCAGAGGACTTGGGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000171584.2
CDS-3UTR CCA 90 bp GGTAGAAGCACAGAGGAAAACATAGACCAGCAGCCCTGGCGGGTGGGCGGGAAGCGGATGGTGGCACACTaGATCCAGGGTTCCTGGGTG +
Preference number: 4 (lower is better)
Translates to: GRSTEENIDQQPWRVGGKRMVAH*IQGSWV
Trigger: CACCCAGGAACCCTGGATCCAGTGTGCCACCATCCG...CTTCCCGCCCACCCGCCAGGGCTGCTGGTCTATGTTTTCCTCTGTGCTTCTACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS-3UTR CCA 90 bp CCAGGAGTGGTTTTCATGAGGAAGCCAGGGTGCTGTGTCCCCTCTGAGCACGTGAGCAGCCGGGTGGTGTaGCTCAGCACTCCCAGGATG +
Preference number: 4 (lower is better)
Translates to: PGVVFMRKPGCCVPSEHVSSRVV*LSTPRM
Trigger: CATCCTGGGAGTGCTGAGCCACACCACCCGGCTGCT...CACGTGCTCAGAGGGGACACAGCACCCTGGCTTCCTCATGAAAACCACTCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS-3UTR CCA 90 bp CCAGGAGTGGTTTTCATGAGGAAGCCAGGGTGCTGTGTCCCCTCTGAGCACGTGAGGTACTCAGTGCGGTaGGTGCACAGCAGCCGGGTG +
Preference number: 4 (lower is better)
Translates to: PGVVFMRKPGCCVPSEHVRYSVR*VHSSRV
Trigger: CACCCGGCTGCTGTGCACCCACCGCACTGAGTACCT...CACGTGCTCAGAGGGGACACAGCACCCTGGCTTCCTCATGAAAACCACTCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS-3UTR CCA 90 bp GGTAGAAGCACAGAGGAAAACATAGACCAGCAGCCCTGGCGGGTGGGCGGGAAGGAGTGCTGTGGAGCCTaGGCTGCAGGAAGCTGGATC +
Preference number: 4 (lower is better)
Translates to: GRSTEENIDQQPWRVGGKECCGA*AAGSWI
Trigger: GATCCAGCTTCCTGCAGCCCAGGCTCCACAGCACTC...CTTCCCGCCCACCCGCCAGGGCTGCTGGTCTATGTTTTCCTCTGTGCTTCTACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS-3UTR CCA 90 bp CTGTGGAAGGGAAACCGGCCCCGAATTCTGAGTAAAAAGGCCCATGTGGGTTGGGAGGCCCACCAGCCCTaGGTTGGCAAGGCCCTGCTG +
Preference number: 4 (lower is better)
Translates to: LWKGNRPRILSKKAHVGWEAHQP*VGKALL
Trigger: CAGCAGGGCCTTGCCAACCCAGGGCTGGTGGGCCTC...CCAACCCACATGGGCCTTTTTACTCAGAATTCGGGGCCGGTTTCCCTTCCACAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS-3UTR CCA 90 bp CCAGGAGTGGTTTTCATGAGGAAGCCAGGGTGCTGTGTCCCCTCTGAGCACGTGCTGATGCGCTGCTGGTaGGGTGACTGCAGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: PGVVFMRKPGCCVPSEHVLMRCW*GDCSGW
Trigger: CCAGCCACTGCAGTCACCCCACCAGCAGCGCATCAG...CACGTGCTCAGAGGGGACACAGCACCCTGGCTTCCTCATGAAAACCACTCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS-3UTR CCA 90 bp GGAGTGGTTTTCATGAGGAAGCCAGGGTGCTGTGTCCCCTCTGAGCACGTGAGAAACAGGGAGTGCGGCTaGTTGCGCAGGGCTGAGGGG +
Preference number: 4 (lower is better)
Translates to: GVVFMRKPGCCVPSEHVRNRECG*LRRAEG
Trigger: CCCCTCAGCCCTGCGCAACCAGCCGCACTCCCTGTT...TCTCACGTGCTCAGAGGGGACACAGCACCCTGGCTTCCTCATGAAAACCACTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS-3UTR CCA 90 bp GGTAGAAGCACAGAGGAAAACATAGACCAGCAGCCCTGGCGGGTGGGCGGGAAGCATCCAGGCCACCCATaGCGACAGCCACCTCACTCA +
Preference number: 4 (lower is better)
Translates to: GRSTEENIDQQPWRVGGKHPGHP*RQPPHS
Trigger: TGAGTGAGGTGGCTGTCGCCATGGGTGGCCTGGATG...CTTCCCGCCCACCCGCCAGGGCTGCTGGTCTATGTTTTCCTCTGTGCTTCTACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000167360.8
3UTR CAA 72 bp CGGCAGGATCTCAGAGGGAGGCCCTGTTCGGACCAATaGCCCGGCTTCCATCAACAGCACCACATCAGCCCT +
Preference number: 4 (lower is better)
Translates to: RQDLRGRPCSDQ*PGFHQQHHISP
Trigger: AGGGCTGATGTGGTGCTGTTGATGGAAGCCGGGCAATTGGTCCGAACAGGGCCTCCCTCTGAGATCCTGCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000171584.2
CDS-3UTR TCA 90 bp GGAGTGGTTTTCATGAGGAAGCCAGGGTGCTGTGTCCCCTCTGAGCACGTGAGAGGCGCCAGCCAGGATTaGGAGCTGGGGAGTGATTGG +
Preference number: 4 (lower is better)
Translates to: GVVFMRKPGCCVPSEHVRGASQD*ELGSDW
Trigger: CCAATCACTCCCCAGCTCTCAATCCTGGCTGGCGCC...TCTCACGTGCTCAGAGGGGACACAGCACCCTGGCTTCCTCATGAAAACCACTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
ENSMUST00000171584.2
CDS-3UTR TCA 90 bp CTGGCTGTGCTCAGAGGCTCTCCTAGACCCAGGTGTCAAGGCAACTGGAAAAGAGGGCCAGGCTGTGGGTaGACCAGGCCACAGCTGTCA +
Preference number: 4 (lower is better)
Translates to: LAVLRGSPRPRCQGNWKRGPGCG*TRPQLS
Trigger: TGACAGCTGTGGCCTGGTTCACCCACAGCCTGGCCC...TCTTTTCCAGTTGCCTTGACACCTGGGTCTAGGAGAGCCTCTGAGCACAGCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000171584.2
CDS-3UTR TCA 90 bp GTTTTCATGAGGAAGCCAGGGTGCTGTGTCCCCTCTGAGCACGTGAGAAGAGGTCAGCCAGCTGGGATCTaGGCTCGGCCAGCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: VFMRKPGCCVPSEHVRRGQPAGI*ARPAPA
Trigger: AGCTGGAGCTGGCCGAGCTCAGATCCCAGCTGGCTG...ACCTCTTCTCACGTGCTCAGAGGGGACACAGCACCCTGGCTTCCTCATGAAAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS-3UTR GCA 90 bp GTCCCCTCTGAGCACGTGAGAAGAGGTAGAAGCACAGAGGAAAACATAGACCAGGCCAGGAAGGCAGGATaGAGCCTGCGGGGGAGGCGG +
Preference number: 4 (lower is better)
Translates to: VPSEHVRRGRSTEENIDQARKAG*SLRGRR
Trigger: CCGCCTCCCCCGCAGGCTGCATCCTGCCTTCCTGGC...CTGGTCTATGTTTTCCTCTGTGCTTCTACCTCTTCTCACGTGCTCAGAGGGGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
ENSMUST00000171584.2
CDS-3UTR GCA 90 bp GGTAGAAGCACAGAGGAAAACATAGACCAGCAGCCCTGGCGGGTGGGCGGGAAGCTTTGCGGTAGAGGGTaGTCAGCACAGCCACTCGTG +
Preference number: 4 (lower is better)
Translates to: GRSTEENIDQQPWRVGGKLCGRG*SAQPLV
Trigger: CACGAGTGGCTGTGCTGAGCACCCTCTACCGCAAAG...CTTCCCGCCCACCCGCCAGGGCTGCTGGTCTATGTTTTCCTCTGTGCTTCTACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
ENSMUST00000171584.2
CDS-3UTR GCA 90 bp GGAGTGGTTTTCATGAGGAAGCCAGGGTGCTGTGTCCCCTCTGAGCACGTGAGACTGTGGAGCCTGGGCTaGAGGAAGCTGGATCCTCCC +
Preference number: 4 (lower is better)
Translates to: GVVFMRKPGCCVPSEHVRLWSLG*RKLDPP
Trigger: GGGAGGATCCAGCTTCCTGCAGCCCAGGCTCCACAG...TCTCACGTGCTCAGAGGGGACACAGCACCCTGGCTTCCTCATGAAAACCACTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS-3UTR GCA 90 bp CCAGGAGTGGTTTTCATGAGGAAGCCAGGGTGCTGTGTCCCCTCTGAGCACGTGTTGAAGGGCGCCTGCTaGAAAGAGCACAGCCCGGAG +
Preference number: 4 (lower is better)
Translates to: PGVVFMRKPGCCVPSEHVLKGAC*KEHSPE
Trigger: CTCCGGGCTGTGCTCTTTGCAGCAGGCGCCCTTCAA...CACGTGCTCAGAGGGGACACAGCACCCTGGCTTCCTCATGAAAACCACTCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS-3UTR GCA 90 bp GGAGTGGTTTTCATGAGGAAGCCAGGGTGCTGTGTCCCCTCTGAGCACGTGAGAGAGCACAGGGAGGCCTaGCAGGGTGTCAGCCAGATG +
Preference number: 4 (lower is better)
Translates to: GVVFMRKPGCCVPSEHVREHREA*QGVSQM
Trigger: CATCTGGCTGACACCCTGGCAGGCCTCCCTGTGCTC...TCTCACGTGCTCAGAGGGGACACAGCACCCTGGCTTCCTCATGAAAACCACTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS-3UTR GCA 90 bp CTGTGGAAGGGAAACCGGCCCCGAATTCTGAGTAAAAAGGCCCATGTGGGTTGGCCTGTAAGTGGCCCCTaGAGCCCGGAGCACAGGGAG +
Preference number: 4 (lower is better)
Translates to: LWKGNRPRILSKKAHVGWPVSGP*SPEHRE
Trigger: CTCCCTGTGCTCCGGGCTGCAGGGGCCACTTACAGG...CCAACCCACATGGGCCTTTTTACTCAGAATTCGGGGCCGGTTTCCCTTCCACAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS-3UTR GCA 90 bp CTGTGGAAGGGAAACCGGCCCCGAATTCTGAGTAAAAAGGCCCATGTGGGTTGGGGCGCTGACCACTGCTaGCCCCATGAGCTGCAGTCG +
Preference number: 4 (lower is better)
Translates to: LWKGNRPRILSKKAHVGWGADHC*PHELQS
Trigger: CGACTGCAGCTCATGGGGGCAGCAGTGGTCAGCGCC...CCAACCCACATGGGCCTTTTTACTCAGAATTCGGGGCCGGTTTCCCTTCCACAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS-3UTR GCA 90 bp CCAGGAGTGGTTTTCATGAGGAAGCCAGGGTGCTGTGTCCCCTCTGAGCACGTGAATGGCGCTGACCACTaGTGCCCCCATGAGCTGCAG +
Preference number: 4 (lower is better)
Translates to: PGVVFMRKPGCCVPSEHVNGADH*CPHELQ
Trigger: CTGCAGCTCATGGGGGCAGCAGTGGTCAGCGCCATT...CACGTGCTCAGAGGGGACACAGCACCCTGGCTTCCTCATGAAAACCACTCCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS-3UTR GCA 90 bp CTGTGGAAGGGAAACCGGCCCCGAATTCTGAGTAAAAAGGCCCATGTGGGTTGGGCAAGGCCCTGCTGGTaGTGCACCAGGGCAATGCCC +
Preference number: 4 (lower is better)
Translates to: LWKGNRPRILSKKAHVGWARPCW*CTRAMP
Trigger: GGGCATTGCCCTGGTGCAGCACCAGCAGGGCCTTGC...CCAACCCACATGGGCCTTTTTACTCAGAATTCGGGGCCGGTTTCCCTTCCACAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS-3UTR GCA 90 bp CTGTGGAAGGGAAACCGGCCCCGAATTCTGAGTAAAAAGGCCCATGTGGGTTGGACTTGCCGGAGCCTGTaGGGCCCACGATGCCCAGCT +
Preference number: 4 (lower is better)
Translates to: LWKGNRPRILSKKAHVGWTCRSL*GPRCPA
Trigger: AGCTGGGCATCGTGGGCCGCACAGGCTCCGGCAAGT...CCAACCCACATGGGCCTTTTTACTCAGAATTCGGGGCCGGTTTCCCTTCCACAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS-3UTR GCA 90 bp CCAGGAGTGGTTTTCATGAGGAAGCCAGGGTGCTGTGTCCCCTCTGAGCACGTGGAAACAGGGAAGACTTaGCGGAGCCTGTGCGGCCCA +
Preference number: 4 (lower is better)
Translates to: PGVVFMRKPGCCVPSEHVETGKT*RSLCGP
Trigger: TGGGCCGCACAGGCTCCGGCAAGTCTTCCCTGTTTC...CACGTGCTCAGAGGGGACACAGCACCCTGGCTTCCTCATGAAAACCACTCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS-3UTR GCA 90 bp GGAGTGGTTTTCATGAGGAAGCCAGGGTGCTGTGTCCCCTCTGAGCACGTGAGACTGCTCTGCAGGAGCTaGTGGAACAGGGAGTGCGGC +
Preference number: 4 (lower is better)
Translates to: GVVFMRKPGCCVPSEHVRLLCRS*WNRECG
Trigger: GCCGCACTCCCTGTTCCAGCAGCTCCTGCAGAGCAG...TCTCACGTGCTCAGAGGGGACACAGCACCCTGGCTTCCTCATGAAAACCACTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS-3UTR CCA 90 bp GTTTTCATGAGGAAGCCAGGGTGCTGTGTCCCCTCTGAGCACGTGAGAAGAGGTCTTGGGGTGCCCAAGTaGCAGGCACTGAGGACGGCG +
Preference number: 4 (lower is better)
Translates to: VFMRKPGCCVPSEHVRRGLGVPK*QALRTA
Trigger: CGCCGTCCTCAGTGCCTGCCACTTGGGCACCCCAAG...ACCTCTTCTCACGTGCTCAGAGGGGACACAGCACCCTGGCTTCCTCATGAAAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
ENSMUST00000171584.2
CDS-3UTR CCA 90 bp CCAGGAGTGGTTTTCATGAGGAAGCCAGGGTGCTGTGTCCCCTCTGAGCACGTGAGGGCCCTCCACAGTTaGGCCCCCTCCTTCCAATGT +
Preference number: 4 (lower is better)
Translates to: PGVVFMRKPGCCVPSEHVRALHS*APSFQC
Trigger: ACATTGGAAGGAGGGGGCCCAACTGTGGAGGGCCCT...CACGTGCTCAGAGGGGACACAGCACCCTGGCTTCCTCATGAAAACCACTCCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
ENSMUST00000171584.2
CDS-3UTR CCA 90 bp GGAGTGGTTTTCATGAGGAAGCCAGGGTGCTGTGTCCCCTCTGAGCACGTGAGATGCACAGCAGCCGGGTaGTGTGGCTCAGCACTCCCA +
Preference number: 4 (lower is better)
Translates to: GVVFMRKPGCCVPSEHVRCTAAG*CGSALP
Trigger: TGGGAGTGCTGAGCCACACCACCCGGCTGCTGTGCA...TCTCACGTGCTCAGAGGGGACACAGCACCCTGGCTTCCTCATGAAAACCACTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS-3UTR CCA 90 bp GTTTTCATGAGGAAGCCAGGGTGCTGTGTCCCCTCTGAGCACGTGAGAAGAGGTCCAGGCCGCTGCCCATaGCCCTCCAGTATGCTCGGT +
Preference number: 4 (lower is better)
Translates to: VFMRKPGCCVPSEHVRRGPGRCP*PSSMLG
Trigger: ACCGAGCATACTGGAGGGCCATGGGCAGCGGCCTGG...ACCTCTTCTCACGTGCTCAGAGGGGACACAGCACCCTGGCTTCCTCATGAAAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS-3UTR CCA 90 bp CCAGGAGTGGTTTTCATGAGGAAGCCAGGGTGCTGTGTCCCCTCTGAGCACGTGCGATGCAGTAGGCGGTaGTGTAGGCTGGCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: PGVVFMRKPGCCVPSEHVRCSRR*CRLAAA
Trigger: AGCAGCTGCCAGCCTACACCACCGCCTACTGCATCG...CACGTGCTCAGAGGGGACACAGCACCCTGGCTTCCTCATGAAAACCACTCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS-3UTR CCA 90 bp GGTAGAAGCACAGAGGAAAACATAGACCAGCAGCCCTGGCGGGTGGGCGGGAAGCTTCAAACCTGTAAGTaGCCCCTGCAGCCCGGAGCA +
Preference number: 4 (lower is better)
Translates to: GRSTEENIDQQPWRVGGKLQTCK*PLQPGA
Trigger: TGCTCCGGGCTGCAGGGGCCACTTACAGGTTTGAAG...CTTCCCGCCCACCCGCCAGGGCTGCTGGTCTATGTTTTCCTCTGTGCTTCTACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS-3UTR CCA 90 bp GTTTTCATGAGGAAGCCAGGGTGCTGTGTCCCCTCTGAGCACGTGAGAAGAGGTCCACCAGCCCTGGGTTaGCAAGGCCCTGCTGGTGCT +
Preference number: 4 (lower is better)
Translates to: VFMRKPGCCVPSEHVRRGPPALG*QGPAGA
Trigger: AGCACCAGCAGGGCCTTGCCAACCCAGGGCTGGTGG...ACCTCTTCTCACGTGCTCAGAGGGGACACAGCACCCTGGCTTCCTCATGAAAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS-3UTR CCA 90 bp GTTTTCATGAGGAAGCCAGGGTGCTGTGTCCCCTCTGAGCACGTGAGAAGAGGTGCACTCGCCCTGCGTTaGGCTCCAGCAGCCGGAAGA +
Preference number: 4 (lower is better)
Translates to: VFMRKPGCCVPSEHVRRGALALR*APAAGR
Trigger: TCTTCCGGCTGCTGGAGCCCAACGCAGGGCGAGTGC...ACCTCTTCTCACGTGCTCAGAGGGGACACAGCACCCTGGCTTCCTCATGAAAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS-3UTR CCA 90 bp GGAGTGGTTTTCATGAGGAAGCCAGGGTGCTGTGTCCCCTCTGAGCACGTGAGAACCACCCTCCCGGCTTaGAGCACCAGCACACGGTCA +
Preference number: 4 (lower is better)
Translates to: GVVFMRKPGCCVPSEHVRTTLPA*STSTRS
Trigger: TGACCGTGTGCTGGTGCTCCAAGCCGGGAGGGTGGT...TCTCACGTGCTCAGAGGGGACACAGCACCCTGGCTTCCTCATGAAAACCACTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS-3UTR TCA 90 bp GGTAGAAGCACAGAGGAAAACATAGACCAGCAGCCCTGGCGGGTGGGCGGGAAGTTGAGAGCTGGGGAGTaGTTGGTAGTCCTTGGGGTG +
Preference number: 4 (lower is better)
Translates to: GRSTEENIDQQPWRVGGKLRAGE*LVVLGV
Trigger: CACCCCAAGGACTACCAATCACTCCCCAGCTCTCAA...CTTCCCGCCCACCCGCCAGGGCTGCTGGTCTATGTTTTCCTCTGTGCTTCTACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
ENSMUST00000171584.2
CDS-3UTR TCA 90 bp CCAGGAGTGGTTTTCATGAGGAAGCCAGGGTGCTGTGTCCCCTCTGAGCACGTGACAGCAGGTAGAGAGTaGTGGCCAGCTGCAGAGGCA +
Preference number: 4 (lower is better)
Translates to: PGVVFMRKPGCCVPSEHVTAGRE*WPAAEA
Trigger: TGCCTCTGCAGCTGGCCATCACTCTCTACCTGCTGT...CACGTGCTCAGAGGGGACACAGCACCCTGGCTTCCTCATGAAAACCACTCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
ENSMUST00000171584.2
CDS-3UTR TCA 90 bp TCCACCACCCTCCCGGCTTGGAGCACCAGCACACGGTCAGAGTTTAGGATCGTGCCTGGTTGCTGGCCATaGTTCGGGTGGCAATCACTT +
Preference number: 4 (lower is better)
Translates to: STTLPAWSTSTRSEFRIVPGCWP*FGWQSL
Trigger: AAGTGATTGCCACCCGAATCATGGCCAGCAACCAGG...CACGATCCTAAACTCTGACCGTGTGCTGGTGCTCCAAGCCGGGAGGGTGGTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000171584.2
CDS-3UTR TCA 90 bp GGAGTGGTTTTCATGAGGAAGCCAGGGTGCTGTGTCCCCTCTGAGCACGTGAGATGCGCGTGGCTTGCATaGGGAGCAGAGAGACGAGGA +
Preference number: 4 (lower is better)
Translates to: GVVFMRKPGCCVPSEHVRCAWLA*GAERRG
Trigger: TCCTCGTCTCTCTGCTCCTCATGCAAGCCACGCGCA...TCTCACGTGCTCAGAGGGGACACAGCACCCTGGCTTCCTCATGAAAACCACTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS-3UTR TCA 90 bp GGAGTGGTTTTCATGAGGAAGCCAGGGTGCTGTGTCCCCTCTGAGCACGTGAGATGTGCAGTGGGGTGCTaGGCAGTGGGGTGTAGAGGT +
Preference number: 4 (lower is better)
Translates to: GVVFMRKPGCCVPSEHVRCAVGC*AVGCRG
Trigger: ACCTCTACACCCCACTGCTCAGCACCCCACTGCACA...TCTCACGTGCTCAGAGGGGACACAGCACCCTGGCTTCCTCATGAAAACCACTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS-3UTR TCA 90 bp GTTTTCATGAGGAAGCCAGGGTGCTGTGTCCCCTCTGAGCACGTGAGAAGAGGTAGGCTGGCAGCTGCTTaGAGGGCGCCTGCTGCAAAG +
Preference number: 4 (lower is better)
Translates to: VFMRKPGCCVPSEHVRRGRLAAA*RAPAAK
Trigger: CTTTGCAGCAGGCGCCCTTCAAGCAGCTGCCAGCCT...ACCTCTTCTCACGTGCTCAGAGGGGACACAGCACCCTGGCTTCCTCATGAAAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS-3UTR TCA 90 bp GTCCCCTCTGAGCACGTGAGAAGAGGTAGAAGCACAGAGGAAAACATAGACCAGCCTGGGTCAGCCAGCTaGTGCGCTGCTGGTGGGGTG +
Preference number: 4 (lower is better)
Translates to: VPSEHVRRGRSTEENIDQPGSAS*CAAGGV
Trigger: CACCCCACCAGCAGCGCATCAGCTGGCTGACCCAGG...CTGGTCTATGTTTTCCTCTGTGCTTCTACCTCTTCTCACGTGCTCAGAGGGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS-3UTR TCA 90 bp CCAGGAGTGGTTTTCATGAGGAAGCCAGGGTGCTGTGTCCCCTCTGAGCACGTGGCCACCTCACTCAGGTaGCACTGTTCCAAGGCTTGC +
Preference number: 4 (lower is better)
Translates to: PGVVFMRKPGCCVPSEHVATSLR*HCSKAC
Trigger: GCAAGCCTTGGAACAGTGTCACCTGAGTGAGGTGGC...CACGTGCTCAGAGGGGACACAGCACCCTGGCTTCCTCATGAAAACCACTCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS-3UTR GCA 90 bp CCACACAGCCTGTGGAGCTCCCCAGTGATGGCGGCCAGCAGCGAACTCTTCCCAACGAGCAAGCAAGGGTaGCAACCAGGCATAGGAAAA +
Preference number: 4 (lower is better)
Translates to: PHSLWSSPVMAASSELFPTSKQG*QPGIGK
Trigger: TTTTCCTATGCCTGGTTGGCACCCTTGCTTGCTCGT...TGGGAAGAGTTCGCTGCTGGCCGCCATCACTGGGGAGCTCCACAGGCTGTGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000171584.2
CDS-3UTR GCA 90 bp CTGTGGAAGGGAAACCGGCCCCGAATTCTGAGTAAAAAGGCCCATGTGGGTTGGCTGTGGAGCCTGGGCTaGAGGAAGCTGGATCCTCCC +
Preference number: 4 (lower is better)
Translates to: LWKGNRPRILSKKAHVGWLWSLG*RKLDPP
Trigger: GGGAGGATCCAGCTTCCTGCAGCCCAGGCTCCACAG...CCAACCCACATGGGCCTTTTTACTCAGAATTCGGGGCCGGTTTCCCTTCCACAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS-3UTR GCA 90 bp GTCCCCTCTGAGCACGTGAGAAGAGGTAGAAGCACAGAGGAAAACATAGACCAGCAGGAGCACTCGCCCTaGGTTGGGCTCCAGCAGCCG +
Preference number: 4 (lower is better)
Translates to: VPSEHVRRGRSTEENIDQQEHSP*VGLQQP
Trigger: CGGCTGCTGGAGCCCAACGCAGGGCGAGTGCTCCTG...CTGGTCTATGTTTTCCTCTGTGCTTCTACCTCTTCTCACGTGCTCAGAGGGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS-3UTR GCA 90 bp GTTTTCATGAGGAAGCCAGGGTGCTGTGTCCCCTCTGAGCACGTGAGAAGAGGTCTGCTCTGCAGGAGCTaGTGGAACAGGGAGTGCGGC +
Preference number: 4 (lower is better)
Translates to: VFMRKPGCCVPSEHVRRGLLCRS*WNRECG
Trigger: GCCGCACTCCCTGTTCCAGCAGCTCCTGCAGAGCAG...ACCTCTTCTCACGTGCTCAGAGGGGACACAGCACCCTGGCTTCCTCATGAAAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS-3UTR GCA 90 bp GGCAGTGAGCTGGTGCCCCATGAGGACATAGGTGATGAAGATGGTGATGCAGATCTCGCGCTCCTTCTCTaGCTGTTGCTGGGTGGGGCC +
Preference number: 4 (lower is better)
Translates to: GSELVPHEDIGDEDGDADLALLL*LLLGGA
Trigger: GGCCCCACCCAGCAACAGGCAGAGAAGGAGCGCGAG...ATCTGCATCACCATCTTCATCACCTATGTCCTCATGGGGCACCAGCTCACTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000171584.2
CDS-3UTR CCA 90 bp TGTGTCCCCTCTGAGCACGTGAGAAGAGGTAGAAGCACAGAGGAAAACATAGACACGGCGAGGAGCGCGTaGGGAAGGGCGCTGAGCACC +
Preference number: 4 (lower is better)
Translates to: CVPSEHVRRGRSTEENIDTARSA*GRALST
Trigger: GGTGCTCAGCGCCCTTCCCCACGCGCTCCTCGCCGT...GTCTATGTTTTCCTCTGTGCTTCTACCTCTTCTCACGTGCTCAGAGGGGACACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
ENSMUST00000171584.2
CDS-3UTR CCA 90 bp CTGTGGAAGGGAAACCGGCCCCGAATTCTGAGTAAAAAGGCCCATGTGGGTTGGCACAGGGCCAGGCTGTaGGTGAACCAGGCCACAGCT +
Preference number: 4 (lower is better)
Translates to: LWKGNRPRILSKKAHVGWHRARL*VNQATA
Trigger: AGCTGTGGCCTGGTTCACCCACAGCCTGGCCCTGTG...CCAACCCACATGGGCCTTTTTACTCAGAATTCGGGGCCGGTTTCCCTTCCACAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
ENSMUST00000171584.2
CDS-3UTR CCA 90 bp GTCCCCTCTGAGCACGTGAGAAGAGGTAGAAGCACAGAGGAAAACATAGACCAGCGGTGGGAGGGCGGCTaGGCCCAAGCTTCAGGGCTT +
Preference number: 4 (lower is better)
Translates to: VPSEHVRRGRSTEENIDQRWEGG*AQASGL
Trigger: AAGCCCTGAAGCTTGGGCCCAGCCGCCCTCCCACCG...CTGGTCTATGTTTTCCTCTGTGCTTCTACCTCTTCTCACGTGCTCAGAGGGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
ENSMUST00000171584.2
CDS-3UTR CCA 90 bp GGTAGAAGCACAGAGGAAAACATAGACCAGCAGCCCTGGCGGGTGGGCGGGAAGTGGATCCAGGGTTCCTaGGTGGCTAGTCCAAAGCCT +
Preference number: 4 (lower is better)
Translates to: GRSTEENIDQQPWRVGGKWIQGS*VASPKP
Trigger: AGGCTTTGGACTAGCCACCCAGGAACCCTGGATCCA...CTTCCCGCCCACCCGCCAGGGCTGCTGGTCTATGTTTTCCTCTGTGCTTCTACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS-3UTR CCA 90 bp GTTTTCATGAGGAAGCCAGGGTGCTGTGTCCCCTCTGAGCACGTGAGAAGAGGTTGCACAGCAGCCGGGTaGTGTGGCTCAGCACTCCCA +
Preference number: 4 (lower is better)
Translates to: VFMRKPGCCVPSEHVRRGCTAAG*CGSALP
Trigger: TGGGAGTGCTGAGCCACACCACCCGGCTGCTGTGCA...ACCTCTTCTCACGTGCTCAGAGGGGACACAGCACCCTGGCTTCCTCATGAAAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS-3UTR CCA 90 bp TGTGTCCCCTCTGAGCACGTGAGAAGAGGTAGAAGCACAGAGGAAAACATAGACGCAGAGAGACGAGGATaGCGGCGGCCAGGCCGCTGC +
Preference number: 4 (lower is better)
Translates to: CVPSEHVRRGRSTEENIDAERRG*RRPGRC
Trigger: GCAGCGGCCTGGCCGCCGCCATCCTCGTCTCTCTGC...GTCTATGTTTTCCTCTGTGCTTCTACCTCTTCTCACGTGCTCAGAGGGGACACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS-3UTR CCA 90 bp CCAGGAGTGGTTTTCATGAGGAAGCCAGGGTGCTGTGTCCCCTCTGAGCACGTGCTTCAAACCTGTAAGTaGCCCCTGCAGCCCGGAGCA +
Preference number: 4 (lower is better)
Translates to: PGVVFMRKPGCCVPSEHVLQTCK*PLQPGA
Trigger: TGCTCCGGGCTGCAGGGGCCACTTACAGGTTTGAAG...CACGTGCTCAGAGGGGACACAGCACCCTGGCTTCCTCATGAAAACCACTCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS-3UTR CCA 90 bp GGTAGAAGCACAGAGGAAAACATAGACCAGCAGCCCTGGCGGGTGGGCGGGAAGGCAAACTGGCACCTCTaGTTCAGCTCCAAGAGTCGC +
Preference number: 4 (lower is better)
Translates to: GRSTEENIDQQPWRVGGKANWHL*FSSKSR
Trigger: GCGACTCTTGGAGCTGAACCAGAGGTGCCAGTTTGC...CTTCCCGCCCACCCGCCAGGGCTGCTGGTCTATGTTTTCCTCTGTGCTTCTACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS-3UTR CCA 90 bp GGAGTGGTTTTCATGAGGAAGCCAGGGTGCTGTGTCCCCTCTGAGCACGTGAGATTGGCAAGGCCCTGCTaGTGCTGCACCAGGGCAATG +
Preference number: 4 (lower is better)
Translates to: GVVFMRKPGCCVPSEHVRLARPC*CCTRAM
Trigger: CATTGCCCTGGTGCAGCACCAGCAGGGCCTTGCCAA...TCTCACGTGCTCAGAGGGGACACAGCACCCTGGCTTCCTCATGAAAACCACTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS-3UTR CCA 90 bp GTCCCCTCTGAGCACGTGAGAAGAGGTAGAAGCACAGAGGAAAACATAGACCAGGAGGCCCACCAGCCCTaGGTTGGCAAGGCCCTGCTG +
Preference number: 4 (lower is better)
Translates to: VPSEHVRRGRSTEENIDQEAHQP*VGKALL
Trigger: CAGCAGGGCCTTGCCAACCCAGGGCTGGTGGGCCTC...CTGGTCTATGTTTTCCTCTGTGCTTCTACCTCTTCTCACGTGCTCAGAGGGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS-3UTR CCA 90 bp CTGTGGAAGGGAAACCGGCCCCGAATTCTGAGTAAAAAGGCCCATGTGGGTTGGCTGATGCGCTGCTGGTaGGGTGACTGCAGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: LWKGNRPRILSKKAHVGWLMRCW*GDCSGW
Trigger: CCAGCCACTGCAGTCACCCCACCAGCAGCGCATCAG...CCAACCCACATGGGCCTTTTTACTCAGAATTCGGGGCCGGTTTCCCTTCCACAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS-3UTR CCA 90 bp CTGTGGAAGGGAAACCGGCCCCGAATTCTGAGTAAAAAGGCCCATGTGGGTTGGCAGCTGATGCGCTGCTaGTGGGGTGACTGCAGTGGC +
Preference number: 4 (lower is better)
Translates to: LWKGNRPRILSKKAHVGWQLMRC*WGDCSG
Trigger: GCCACTGCAGTCACCCCACCAGCAGCGCATCAGCTG...CCAACCCACATGGGCCTTTTTACTCAGAATTCGGGGCCGGTTTCCCTTCCACAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS-3UTR CCA 90 bp GTTTTCATGAGGAAGCCAGGGTGCTGTGTCCCCTCTGAGCACGTGAGAAGAGGTCAGCTGATGCGCTGCTaGTGGGGTGACTGCAGTGGC +
Preference number: 4 (lower is better)
Translates to: VFMRKPGCCVPSEHVRRGQLMRC*WGDCSG
Trigger: GCCACTGCAGTCACCCCACCAGCAGCGCATCAGCTG...ACCTCTTCTCACGTGCTCAGAGGGGACACAGCACCCTGGCTTCCTCATGAAAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS-3UTR CCA 90 bp CCAGGAGTGGTTTTCATGAGGAAGCCAGGGTGCTGTGTCCCCTCTGAGCACGTGCCAGCTCCAGCTGGCTaGTGTCCACATTGTCCAGGA +
Preference number: 4 (lower is better)
Translates to: PGVVFMRKPGCCVPSEHVPAPAG*CPHCPG
Trigger: TCCTGGACAATGTGGACACCAGCCAGCTGGAGCTGG...CACGTGCTCAGAGGGGACACAGCACCCTGGCTTCCTCATGAAAACCACTCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS-3UTR CCA 90 bp CTGTGGAAGGGAAACCGGCCCCGAATTCTGAGTAAAAAGGCCCATGTGGGTTGGCTCTGCAGGAGCTGCTaGAACAGGGAGTGCGGCTGG +
Preference number: 4 (lower is better)
Translates to: LWKGNRPRILSKKAHVGWLCRSC*NRECGW
Trigger: CCAGCCGCACTCCCTGTTCCAGCAGCTCCTGCAGAG...CCAACCCACATGGGCCTTTTTACTCAGAATTCGGGGCCGGTTTCCCTTCCACAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS-3UTR TCA 90 bp GTCCCCTCTGAGCACGTGAGAAGAGGTAGAAGCACAGAGGAAAACATAGACCAGGGGCCAGGCTGTGGGTaGACCAGGCCACAGCTGTCA +
Preference number: 4 (lower is better)
Translates to: VPSEHVRRGRSTEENIDQGPGCG*TRPQLS
Trigger: TGACAGCTGTGGCCTGGTTCACCCACAGCCTGGCCC...CTGGTCTATGTTTTCCTCTGTGCTTCTACCTCTTCTCACGTGCTCAGAGGGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
ENSMUST00000171584.2
CDS-3UTR TCA 90 bp CCAGGAGTGGTTTTCATGAGGAAGCCAGGGTGCTGTGTCCCCTCTGAGCACGTGCTGCCAGTTGCAGAATaGGAAGACACACACGGCCCA +
Preference number: 4 (lower is better)
Translates to: PGVVFMRKPGCCVPSEHVLPVAE*EDTHGP
Trigger: TGGGCCGTGTGTGTCTTCTCATTCTGCAACTGGCAG...CACGTGCTCAGAGGGGACACAGCACCCTGGCTTCCTCATGAAAACCACTCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
ENSMUST00000171584.2
CDS-3UTR TCA 90 bp GGAGTGGTTTTCATGAGGAAGCCAGGGTGCTGTGTCCCCTCTGAGCACGTGAGATGGCTTAGAGGCTCTTaGCCTTCCTCCAGGAAGCCC +
Preference number: 4 (lower is better)
Translates to: GVVFMRKPGCCVPSEHVRWLRGS*PSSRKP
Trigger: GGGCTTCCTGGAGGAAGGTCAAGAGCCTCTAAGCCA...TCTCACGTGCTCAGAGGGGACACAGCACCCTGGCTTCCTCATGAAAACCACTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
ENSMUST00000171584.2
CDS-3UTR TCA 90 bp GTTTTCATGAGGAAGCCAGGGTGCTGTGTCCCCTCTGAGCACGTGAGAAGAGGTAGCTGCCAGCAAAGTTaGGCAGCCTCTCGGAGTCGG +
Preference number: 4 (lower is better)
Translates to: VFMRKPGCCVPSEHVRRGSCQQS*AASRSR
Trigger: CCGACTCCGAGAGGCTGCTCAACTTTGCTGGCAGCT...ACCTCTTCTCACGTGCTCAGAGGGGACACAGCACCCTGGCTTCCTCATGAAAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
ENSMUST00000171584.2
CDS-3UTR TCA 90 bp GGTAGAAGCACAGAGGAAAACATAGACCAGCAGCCCTGGCGGGTGGGCGGGAAGTGGCAATCACTTTGTTaGCAGGTACCAGCAGCAGCG +
Preference number: 4 (lower is better)
Translates to: GRSTEENIDQQPWRVGGKWQSLC*QVPAAA
Trigger: CGCTGCTGCTGGTACCTGTCAACAAAGTGATTGCCA...CTTCCCGCCCACCCGCCAGGGCTGCTGGTCTATGTTTTCCTCTGTGCTTCTACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
ENSMUST00000171584.2
CDS-3UTR TCA 90 bp CTGTGGAAGGGAAACCGGCCCCGAATTCTGAGTAAAAAGGCCCATGTGGGTTGGTGTGCAGTGGGGTGCTaGGCAGTGGGGTGTAGAGGT +
Preference number: 4 (lower is better)
Translates to: LWKGNRPRILSKKAHVGWCAVGC*AVGCRG
Trigger: ACCTCTACACCCCACTGCTCAGCACCCCACTGCACA...CCAACCCACATGGGCCTTTTTACTCAGAATTCGGGGCCGGTTTCCCTTCCACAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS-3UTR GCA 90 bp ACTGATGAAGGTCTTCTGGCTTGCTCCAATTGGGTCCCAGGAGAACAGGGCCTCAGGGGAATGAACCAGTaGCCACAGGGCCAGGCTGTG +
Preference number: 4 (lower is better)
Translates to: TDEGLLACSNWVPGEQGLRGMNQ*PQGQAV
Trigger: CACAGCCTGGCCCTGTGGGCACTGGTTCATTCCCCT...GAGGCCCTGTTCTCCTGGGACCCAATTGGAGCAAGCCAGAAGACCTTCATCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000171584.2
CDS-3UTR GCA 90 bp GGTAGAAGCACAGAGGAAAACATAGACCAGCAGCCCTGGCGGGTGGGCGGGAAGGTACCTCGCTGGCAATaGCACAGCAGAGTTAGTACC +
Preference number: 4 (lower is better)
Translates to: GRSTEENIDQQPWRVGGKVPRWQ*HSRVST
Trigger: GGTACTAACTCTGCTGTGGCATTGCCAGCGAGGTAC...CTTCCCGCCCACCCGCCAGGGCTGCTGGTCTATGTTTTCCTCTGTGCTTCTACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
ENSMUST00000171584.2
CDS-3UTR GCA 90 bp GACCCAAGTCCTCTGGCTGTGCTCAGAGGCTCTCCTAGACCCAGGTGTCAAGGCCCCATAGGCCAAGACTaGTGCCAGTTGCAGAATGAG +
Preference number: 4 (lower is better)
Translates to: DPSPLAVLRGSPRPRCQGPIGQD*CQLQNE
Trigger: CTCATTCTGCAACTGGCAGCAGTCTTGGCCTATGGG...GCCTTGACACCTGGGTCTAGGAGAGCCTCTGAGCACAGCCAGAGGACTTGGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000171584.2
CDS-3UTR GCA 90 bp TGTGTCCCCTCTGAGCACGTGAGAAGAGGTAGAAGCACAGAGGAAAACATAGACTGGTCCCCCAGGGGCTaGCCAGCCCAACCCATAGGC +
Preference number: 4 (lower is better)
Translates to: CVPSEHVRRGRSTEENIDWSPRG*PAQPIG
Trigger: GCCTATGGGTTGGGCTGGGCAGCCCCTGGGGGACCA...GTCTATGTTTTCCTCTGTGCTTCTACCTCTTCTCACGTGCTCAGAGGGGACACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
ENSMUST00000171584.2
CDS-3UTR GCA 90 bp GTTTTCATGAGGAAGCCAGGGTGCTGTGTCCCCTCTGAGCACGTGAGAAGAGGTCAGCCAGGAAGGCCATaGCCACCTGCTGGTACAGCA +
Preference number: 4 (lower is better)
Translates to: VFMRKPGCCVPSEHVRRGQPGRP*PPAGTA
Trigger: TGCTGTACCAGCAGGTGGGCATGGCCTTCCTGGCTG...ACCTCTTCTCACGTGCTCAGAGGGGACACAGCACCCTGGCTTCCTCATGAAAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
ENSMUST00000171584.2
CDS-3UTR GCA 90 bp GGTAGAAGCACAGAGGAAAACATAGACCAGCAGCCCTGGCGGGTGGGCGGGAAGGAAGGTCTTCTGGCTTaGTCCAATTGGGTCCCAGGA +
Preference number: 4 (lower is better)
Translates to: GRSTEENIDQQPWRVGGKEGLLA*SNWVPG
Trigger: TCCTGGGACCCAATTGGAGCAAGCCAGAAGACCTTC...CTTCCCGCCCACCCGCCAGGGCTGCTGGTCTATGTTTTCCTCTGTGCTTCTACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS-3UTR GCA 90 bp GGAGTGGTTTTCATGAGGAAGCCAGGGTGCTGTGTCCCCTCTGAGCACGTGAGATTTCCAGGTACTCAGTaGGGTGGGTGCACAGCAGCC +
Preference number: 4 (lower is better)
Translates to: GVVFMRKPGCCVPSEHVRFPGTQ*GGCTAA
Trigger: GGCTGCTGTGCACCCACCGCACTGAGTACCTGGAAA...TCTCACGTGCTCAGAGGGGACACAGCACCCTGGCTTCCTCATGAAAACCACTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS-3UTR GCA 90 bp CTGTGGAAGGGAAACCGGCCCCGAATTCTGAGTAAAAAGGCCCATGTGGGTTGGTTGAAGGGCGCCTGCTaGAAAGAGCACAGCCCGGAG +
Preference number: 4 (lower is better)
Translates to: LWKGNRPRILSKKAHVGWLKGAC*KEHSPE
Trigger: CTCCGGGCTGTGCTCTTTGCAGCAGGCGCCCTTCAA...CCAACCCACATGGGCCTTTTTACTCAGAATTCGGGGCCGGTTTCCCTTCCACAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS-3UTR GCA 90 bp CTGTGGAAGGGAAACCGGCCCCGAATTCTGAGTAAAAAGGCCCATGTGGGTTGGAATGGCGCTGACCACTaGTGCCCCCATGAGCTGCAG +
Preference number: 4 (lower is better)
Translates to: LWKGNRPRILSKKAHVGWNGADH*CPHELQ
Trigger: CTGCAGCTCATGGGGGCAGCAGTGGTCAGCGCCATT...CCAACCCACATGGGCCTTTTTACTCAGAATTCGGGGCCGGTTTCCCTTCCACAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS-3UTR GCA 90 bp GTCCCCTCTGAGCACGTGAGAAGAGGTAGAAGCACAGAGGAAAACATAGACCAGAGGCCCTGCTGGTGCTaGACCAGGGCAATGCCCGCA +
Preference number: 4 (lower is better)
Translates to: VPSEHVRRGRSTEENIDQRPCWC*TRAMPA
Trigger: TGCGGGCATTGCCCTGGTGCAGCACCAGCAGGGCCT...CTGGTCTATGTTTTCCTCTGTGCTTCTACCTCTTCTCACGTGCTCAGAGGGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS-3UTR GCA 90 bp CTGTGGAAGGGAAACCGGCCCCGAATTCTGAGTAAAAAGGCCCATGTGGGTTGGGAAACAGGGAAGACTTaGCGGAGCCTGTGCGGCCCA +
Preference number: 4 (lower is better)
Translates to: LWKGNRPRILSKKAHVGWETGKT*RSLCGP
Trigger: TGGGCCGCACAGGCTCCGGCAAGTCTTCCCTGTTTC...CCAACCCACATGGGCCTTTTTACTCAGAATTCGGGGCCGGTTTCCCTTCCACAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS-3UTR CCA 90 bp GTCCCCTCTGAGCACGTGAGAAGAGGTAGAAGCACAGAGGAAAACATAGACCAGCTTGGGGTGCCCAAGTaGCAGGCACTGAGGACGGCG +
Preference number: 4 (lower is better)
Translates to: VPSEHVRRGRSTEENIDQLGVPK*QALRTA
Trigger: CGCCGTCCTCAGTGCCTGCCACTTGGGCACCCCAAG...CTGGTCTATGTTTTCCTCTGTGCTTCTACCTCTTCTCACGTGCTCAGAGGGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
ENSMUST00000171584.2
CDS-3UTR CCA 90 bp GTTTTCATGAGGAAGCCAGGGTGCTGTGTCCCCTCTGAGCACGTGAGAAGAGGTAGGGCCCTCCACAGTTaGGCCCCCTCCTTCCAATGT +
Preference number: 4 (lower is better)
Translates to: VFMRKPGCCVPSEHVRRGRALHS*APSFQC
Trigger: ACATTGGAAGGAGGGGGCCCAACTGTGGAGGGCCCT...ACCTCTTCTCACGTGCTCAGAGGGGACACAGCACCCTGGCTTCCTCATGAAAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
ENSMUST00000171584.2
CDS-3UTR CCA 90 bp GGCAGGATCTCAGAGGGAGGCCCTGTTCGGACCAATTGCCCGGCTTCCATCAACCGGAGAATCCCAGCATaGTCCCCACCATCTTCAACA +
Preference number: 4 (lower is better)
Translates to: GRISEGGPVRTNCPASINRRIPA*SPPSST
Trigger: TGTTGAAGATGGTGGGGACCATGCTGGGATTCTCCG...GTTGATGGAAGCCGGGCAATTGGTCCGAACAGGGCCTCCCTCTGAGATCCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000171584.2
CDS-3UTR CCA 90 bp TGTGTCCCCTCTGAGCACGTGAGAAGAGGTAGAAGCACAGAGGAAAACATAGACCGGTGGGAGGGCGGCTaGGCCCAAGCTTCAGGGCTT +
Preference number: 4 (lower is better)
Translates to: CVPSEHVRRGRSTEENIDRWEGG*AQASGL
Trigger: AAGCCCTGAAGCTTGGGCCCAGCCGCCCTCCCACCG...GTCTATGTTTTCCTCTGTGCTTCTACCTCTTCTCACGTGCTCAGAGGGGACACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
ENSMUST00000171584.2
CDS-3UTR CCA 90 bp GGAGTGGTTTTCATGAGGAAGCCAGGGTGCTGTGTCCCCTCTGAGCACGTGAGAAGGCCCCAGGCCTCATaGAAGCTGCCAGCAAAGTTG +
Preference number: 4 (lower is better)
Translates to: GVVFMRKPGCCVPSEHVRRPQAS*KLPAKL
Trigger: CAACTTTGCTGGCAGCTTCCATGAGGCCTGGGGCCT...TCTCACGTGCTCAGAGGGGACACAGCACCCTGGCTTCCTCATGAAAACCACTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
ENSMUST00000171584.2
CDS-3UTR CCA 90 bp CCAGGAGTGGTTTTCATGAGGAAGCCAGGGTGCTGTGTCCCCTCTGAGCACGTGTGCCGTAGCATCTCCTaGTTGCTGGCCATGATTCGG +
Preference number: 4 (lower is better)
Translates to: PGVVFMRKPGCCVPSEHVCRSIS*LLAMIR
Trigger: CCGAATCATGGCCAGCAACCAGGAGATGCTACGGCA...CACGTGCTCAGAGGGGACACAGCACCCTGGCTTCCTCATGAAAACCACTCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
ENSMUST00000171584.2
CDS-3UTR CCA 90 bp GTTTTCATGAGGAAGCCAGGGTGCTGTGTCCCCTCTGAGCACGTGAGAAGAGGTCATCCACACAGCCTGTaGAGCTCCCCAGTGATGGCG +
Preference number: 4 (lower is better)
Translates to: VFMRKPGCCVPSEHVRRGHPHSL*SSPVMA
Trigger: CGCCATCACTGGGGAGCTCCACAGGCTGTGTGGATG...ACCTCTTCTCACGTGCTCAGAGGGGACACAGCACCCTGGCTTCCTCATGAAAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS-3UTR CCA 90 bp CTGTGGAAGGGAAACCGGCCCCGAATTCTGAGTAAAAAGGCCCATGTGGGTTGGCGGATGGTGGCACACTaGATCCAGGGTTCCTGGGTG +
Preference number: 4 (lower is better)
Translates to: LWKGNRPRILSKKAHVGWRMVAH*IQGSWV
Trigger: CACCCAGGAACCCTGGATCCAGTGTGCCACCATCCG...CCAACCCACATGGGCCTTTTTACTCAGAATTCGGGGCCGGTTTCCCTTCCACAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS-3UTR CCA 90 bp GGTAGAAGCACAGAGGAAAACATAGACCAGCAGCCCTGGCGGGTGGGCGGGAAGTGTTGTCTCGGATGGTaGCACACTGGATCCAGGGTT +
Preference number: 4 (lower is better)
Translates to: GRSTEENIDQQPWRVGGKCCLGW*HTGSRV
Trigger: AACCCTGGATCCAGTGTGCCACCATCCGAGACAACA...CTTCCCGCCCACCCGCCAGGGCTGCTGGTCTATGTTTTCCTCTGTGCTTCTACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS-3UTR CCA 90 bp GTTTTCATGAGGAAGCCAGGGTGCTGTGTCCCCTCTGAGCACGTGAGAAGAGGTGGGAGAAGAGTGCTGTaGAGCCTGGGCTGCAGGAAG +
Preference number: 4 (lower is better)
Translates to: VFMRKPGCCVPSEHVRRGGRRVL*SLGCRK
Trigger: CTTCCTGCAGCCCAGGCTCCACAGCACTCTTCTCCC...ACCTCTTCTCACGTGCTCAGAGGGGACACAGCACCCTGGCTTCCTCATGAAAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS-3UTR CCA 90 bp GTCCCCTCTGAGCACGTGAGAAGAGGTAGAAGCACAGAGGAAAACATAGACCAGGGCGGTGGTGTAGGCTaGCAGCTGCTTGAAGGGCGC +
Preference number: 4 (lower is better)
Translates to: VPSEHVRRGRSTEENIDQGGGVG*QLLEGR
Trigger: GCGCCCTTCAAGCAGCTGCCAGCCTACACCACCGCC...CTGGTCTATGTTTTCCTCTGTGCTTCTACCTCTTCTCACGTGCTCAGAGGGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS-3UTR CCA 90 bp CTGTGGAAGGGAAACCGGCCCCGAATTCTGAGTAAAAAGGCCCATGTGGGTTGGCGATGCAGTAGGCGGTaGTGTAGGCTGGCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: LWKGNRPRILSKKAHVGWRCSRR*CRLAAA
Trigger: AGCAGCTGCCAGCCTACACCACCGCCTACTGCATCG...CCAACCCACATGGGCCTTTTTACTCAGAATTCGGGGCCGGTTTCCCTTCCACAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS-3UTR CCA 90 bp CTGTGGAAGGGAAACCGGCCCCGAATTCTGAGTAAAAAGGCCCATGTGGGTTGGTTGGCAAGGCCCTGCTaGTGCTGCACCAGGGCAATG +
Preference number: 4 (lower is better)
Translates to: LWKGNRPRILSKKAHVGWLARPC*CCTRAM
Trigger: CATTGCCCTGGTGCAGCACCAGCAGGGCCTTGCCAA...CCAACCCACATGGGCCTTTTTACTCAGAATTCGGGGCCGGTTTCCCTTCCACAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS-3UTR CCA 90 bp GTCCCCTCTGAGCACGTGAGAAGAGGTAGAAGCACAGAGGAAAACATAGACCAGCCACCAGCCCTGGGTTaGCAAGGCCCTGCTGGTGCT +
Preference number: 4 (lower is better)
Translates to: VPSEHVRRGRSTEENIDQPPALG*QGPAGA
Trigger: AGCACCAGCAGGGCCTTGCCAACCCAGGGCTGGTGG...CTGGTCTATGTTTTCCTCTGTGCTTCTACCTCTTCTCACGTGCTCAGAGGGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS-3UTR CCA 90 bp GGAGTGGTTTTCATGAGGAAGCCAGGGTGCTGTGTCCCCTCTGAGCACGTGAGATGGCTGTGGGGCTCCTaGGGAACGTCACAGGAATAC +
Preference number: 4 (lower is better)
Translates to: GVVFMRKPGCCVPSEHVRWLWGS*GTSQEY
Trigger: GTATTCCTGTGACGTTCCCCAGGAGCCCCACAGCCA...TCTCACGTGCTCAGAGGGGACACAGCACCCTGGCTTCCTCATGAAAACCACTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS-3UTR CCA 90 bp GTTTTCATGAGGAAGCCAGGGTGCTGTGTCCCCTCTGAGCACGTGAGAAGAGGTTCGGCCAGCTCCAGCTaGCTGGTGTCCACATTGTCC +
Preference number: 4 (lower is better)
Translates to: VFMRKPGCCVPSEHVRRGSASSS*LVSTLS
Trigger: GGACAATGTGGACACCAGCCAGCTGGAGCTGGCCGA...ACCTCTTCTCACGTGCTCAGAGGGGACACAGCACCCTGGCTTCCTCATGAAAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS-3UTR CCA 90 bp GTTTTCATGAGGAAGCCAGGGTGCTGTGTCCCCTCTGAGCACGTGAGAAGAGGTCCTGGGACTCACCCATaGCGACAGCCACCTCACTCA +
Preference number: 4 (lower is better)
Translates to: VFMRKPGCCVPSEHVRRGPGTHP*RQPPHS
Trigger: TGAGTGAGGTGGCTGTCGCCATGGGTGAGTCCCAGG...ACCTCTTCTCACGTGCTCAGAGGGGACACAGCACCCTGGCTTCCTCATGAAAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000047970.14
3UTR CAA 72 bp GGGGATCAGGACTGTAATAGGCCTCAGGGCTGTAGCTaGGAAGATCGAGGAAACGCTGGATCCGGTCCAGGG +
Preference number: 4 (lower is better)
Translates to: GDQDCNRPQGCS*EDRGNAGSGPG
Trigger: CCCTGGACCGGATCCAGCGTTTCCTCGATCTTCCAAGCTACAGCCCTGAGGCCTATTACAGTCCTGATCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000171584.2
CDS-3UTR TCA 90 bp TGTGTCCCCTCTGAGCACGTGAGAAGAGGTAGAAGCACAGAGGAAAACATAGACGGGCCAGGCTGTGGGTaGACCAGGCCACAGCTGTCA +
Preference number: 4 (lower is better)
Translates to: CVPSEHVRRGRSTEENIDGPGCG*TRPQLS
Trigger: TGACAGCTGTGGCCTGGTTCACCCACAGCCTGGCCC...GTCTATGTTTTCCTCTGTGCTTCTACCTCTTCTCACGTGCTCAGAGGGGACACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
ENSMUST00000171584.2
CDS-3UTR TCA 90 bp GGAGTGGTTTTCATGAGGAAGCCAGGGTGCTGTGTCCCCTCTGAGCACGTGAGAGACAGGAAGGGATCATaGGTCCAGGGCTCTTGTGGT +
Preference number: 4 (lower is better)
Translates to: GVVFMRKPGCCVPSEHVRDRKGS*VQGSCG
Trigger: ACCACAAGAGCCCTGGACTCATGATCCCTTCCTGTC...TCTCACGTGCTCAGAGGGGACACAGCACCCTGGCTTCCTCATGAAAACCACTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
ENSMUST00000171584.2
CDS-3UTR TCA 90 bp CCAGGAGTGGTTTTCATGAGGAAGCCAGGGTGCTGTGTCCCCTCTGAGCACGTGGGCATAGGAAAAGCGTaGCAGCCAACTCTCTCCATC +
Preference number: 4 (lower is better)
Translates to: PGVVFMRKPGCCVPSEHVGIGKA*QPTLSI
Trigger: GATGGAGAGAGTTGGCTGTCACGCTTTTCCTATGCC...CACGTGCTCAGAGGGGACACAGCACCCTGGCTTCCTCATGAAAACCACTCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
ENSMUST00000171584.2
CDS-3UTR TCA 90 bp GTTTTCATGAGGAAGCCAGGGTGCTGTGTCCCCTCTGAGCACGTGAGAAGAGGTACAGCAGGTAGAGAGTaGTGGCCAGCTGCAGAGGCA +
Preference number: 4 (lower is better)
Translates to: VFMRKPGCCVPSEHVRRGTAGRE*WPAAEA
Trigger: TGCCTCTGCAGCTGGCCATCACTCTCTACCTGCTGT...ACCTCTTCTCACGTGCTCAGAGGGGACACAGCACCCTGGCTTCCTCATGAAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
ENSMUST00000171584.2
CDS-3UTR TCA 90 bp GACCAATTGCCCGGCTTCCATCAACAGCACCACATCAGCCCTTTCCAGGTACTCACAGCAGGTAGAGAGTaGTGGCCAGCTGCAGAGGCA +
Preference number: 4 (lower is better)
Translates to: DQLPGFHQQHHISPFQVLTAGRE*WPAAEA
Trigger: TGCCTCTGCAGCTGGCCATCACTCTCTACCTGCTGT...GAGTACCTGGAAAGGGCTGATGTGGTGCTGTTGATGGAAGCCGGGCAATTGGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000171584.2
CDS-3UTR TCA 90 bp GGAGTGGTTTTCATGAGGAAGCCAGGGTGCTGTGTCCCCTCTGAGCACGTGAGACCTGGTTGCTGGCCATaGTTCGGGTGGCAATCACTT +
Preference number: 4 (lower is better)
Translates to: GVVFMRKPGCCVPSEHVRPGCWP*FGWQSL
Trigger: AAGTGATTGCCACCCGAATCATGGCCAGCAACCAGG...TCTCACGTGCTCAGAGGGGACACAGCACCCTGGCTTCCTCATGAAAACCACTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
ENSMUST00000171584.2
CDS-3UTR TCA 90 bp GGAGTGGTTTTCATGAGGAAGCCAGGGTGCTGTGTCCCCTCTGAGCACGTGAGAGCCTTTGGACAGTTCTaGCACTGCCACCCATCCACA +
Preference number: 4 (lower is better)
Translates to: GVVFMRKPGCCVPSEHVRAFGQF*HCHPST
Trigger: TGTGGATGGGTGGCAGTGTCAGAACTGTCCAAAGGC...TCTCACGTGCTCAGAGGGGACACAGCACCCTGGCTTCCTCATGAAAACCACTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS-3UTR TCA 90 bp GGAGTGGTTTTCATGAGGAAGCCAGGGTGCTGTGTCCCCTCTGAGCACGTGAGAAGATGGGGACTGGCCTaGGGTAGCCACTTGTTCCTT +
Preference number: 4 (lower is better)
Translates to: GVVFMRKPGCCVPSEHVRRWGLA*GSHLFL
Trigger: AAGGAACAAGTGGCTACCTCAGGCCAGTCCCCATCT...TCTCACGTGCTCAGAGGGGACACAGCACCCTGGCTTCCTCATGAAAACCACTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS-3UTR TCA 90 bp GTTTTCATGAGGAAGCCAGGGTGCTGTGTCCCCTCTGAGCACGTGAGAAGAGGTTGGCTTCCGTCTGTGTaGAACTGCTCACCAGACCCG +
Preference number: 4 (lower is better)
Translates to: VFMRKPGCCVPSEHVRRGWLPSV*NCSPDP
Trigger: CGGGTCTGGTGAGCAGTTTCACACAGACGGAAGCCA...ACCTCTTCTCACGTGCTCAGAGGGGACACAGCACCCTGGCTTCCTCATGAAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS-3UTR TCA 90 bp TGTGTCCCCTCTGAGCACGTGAGAAGAGGTAGAAGCACAGAGGAAAACATAGACCAGCCAGCTGGGATCTaGGCTCGGCCAGCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: CVPSEHVRRGRSTEENIDQPAGI*ARPAPA
Trigger: AGCTGGAGCTGGCCGAGCTCAGATCCCAGCTGGCTG...GTCTATGTTTTCCTCTGTGCTTCTACCTCTTCTCACGTGCTCAGAGGGGACACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS-3UTR TCA 90 bp CTGTGGAAGGGAAACCGGCCCCGAATTCTGAGTAAAAAGGCCCATGTGGGTTGGGCCACCTCACTCAGGTaGCACTGTTCCAAGGCTTGC +
Preference number: 4 (lower is better)
Translates to: LWKGNRPRILSKKAHVGWATSLR*HCSKAC
Trigger: GCAAGCCTTGGAACAGTGTCACCTGAGTGAGGTGGC...CCAACCCACATGGGCCTTTTTACTCAGAATTCGGGGCCGGTTTCCCTTCCACAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS-3UTR GCA 90 bp GTCCTCTGGCTGTGCTCAGAGGCTCTCCTAGACCCAGGTGTCAAGGCAACTGGAGTACCTCGCTGGCAATaGCACAGCAGAGTTAGTACC +
Preference number: 4 (lower is better)
Translates to: VLWLCSEALLDPGVKATGVPRWQ*HSRVST
Trigger: GGTACTAACTCTGCTGTGGCATTGCCAGCGAGGTAC...TCCAGTTGCCTTGACACCTGGGTCTAGGAGAGCCTCTGAGCACAGCCAGAGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000171584.2
CDS-3UTR GCA 90 bp AGCACGGGCAAGTGCAATCCGGGCCCTCTGTCCCCCGCTGAGGGTCACACCTTTAAGACTGCTGCCAGTTaGAGAATGAGAAGACACACA +
Preference number: 4 (lower is better)
Translates to: STGKCNPGPLSPAEGHTFKTAAS*RMRRHT
Trigger: TGTGTGTCTTCTCATTCTGCAACTGGCAGCAGTCTT...AAAGGTGTGACCCTCAGCGGGGGACAGAGGGCCCGGATTGCACTTGCCCGTGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000171584.2
CDS-3UTR GCA 90 bp GGAGTGGTTTTCATGAGGAAGCCAGGGTGCTGTGTCCCCTCTGAGCACGTGAGACCCCTCCTTCCAATGTaGTTGGAAAACTCGGGCCAG +
Preference number: 4 (lower is better)
Translates to: GVVFMRKPGCCVPSEHVRPLLPM*LENSGQ
Trigger: CTGGCCCGAGTTTTCCAAGCACATTGGAAGGAGGGG...TCTCACGTGCTCAGAGGGGACACAGCACCCTGGCTTCCTCATGAAAACCACTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
ENSMUST00000171584.2
CDS-3UTR GCA 90 bp GTTTTCATGAGGAAGCCAGGGTGCTGTGTCCCCTCTGAGCACGTGAGAAGAGGTCTTTGCGGTAGAGGGTaGTCAGCACAGCCACTCGTG +
Preference number: 4 (lower is better)
Translates to: VFMRKPGCCVPSEHVRRGLCGRG*SAQPLV
Trigger: CACGAGTGGCTGTGCTGAGCACCCTCTACCGCAAAG...ACCTCTTCTCACGTGCTCAGAGGGGACACAGCACCCTGGCTTCCTCATGAAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
ENSMUST00000171584.2
CDS-3UTR GCA 90 bp GTCCAAAGCCTTTGGACAGTTCTGACACTGCCACCCATCCACACAGCCTGTGGACTTTGCGGTAGAGGGTaGTCAGCACAGCCACTCGTG +
Preference number: 4 (lower is better)
Translates to: VQSLWTVLTLPPIHTACGLCGRG*SAQPLV
Trigger: CACGAGTGGCTGTGCTGAGCACCCTCTACCGCAAAG...TCCACAGGCTGTGTGGATGGGTGGCAGTGTCAGAACTGTCCAAAGGCTTTGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000171584.2
CDS-3UTR GCA 90 bp GTTTTCATGAGGAAGCCAGGGTGCTGTGTCCCCTCTGAGCACGTGAGAAGAGGTCGGTCCCCCAGAGCCTaGTCCCACCTGAAGAATTTG +
Preference number: 4 (lower is better)
Translates to: VFMRKPGCCVPSEHVRRGRSPRA*SHLKNL
Trigger: CAAATTCTTCAGGTGGGAGCAGGCTCTGGGGGACCG...ACCTCTTCTCACGTGCTCAGAGGGGACACAGCACCCTGGCTTCCTCATGAAAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS-3UTR GCA 90 bp CCAGGAGTGGTTTTCATGAGGAAGCCAGGGTGCTGTGTCCCCTCTGAGCACGTGCCACCTTTCCCACGATaGCCACCAGCATACCCTTTT +
Preference number: 4 (lower is better)
Translates to: PGVVFMRKPGCCVPSEHVPPFPR*PPAYPF
Trigger: AAAAGGGTATGCTGGTGGGCATCGTGGGAAAGGTGG...CACGTGCTCAGAGGGGACACAGCACCCTGGCTTCCTCATGAAAACCACTCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS-3UTR GCA 90 bp GGTAGAAGCACAGAGGAAAACATAGACCAGCAGCCCTGGCGGGTGGGCGGGAAGGTCGAGGAGATAGAGTaGTTTCTCCTGGTAGACAGC +
Preference number: 4 (lower is better)
Translates to: GRSTEENIDQQPWRVGGKVEEIE*FLLVDS
Trigger: GCTGTCTACCAGGAGAAAGCACTCTATCTCCTCGAC...CTTCCCGCCCACCCGCCAGGGCTGCTGGTCTATGTTTTCCTCTGTGCTTCTACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS-3UTR GCA 90 bp TGTGTCCCCTCTGAGCACGTGAGAAGAGGTAGAAGCACAGAGGAAAACATAGACGGCGCTGACCACTGCTaGCCCCATGAGCTGCAGTCG +
Preference number: 4 (lower is better)
Translates to: CVPSEHVRRGRSTEENIDGADHC*PHELQS
Trigger: CGACTGCAGCTCATGGGGGCAGCAGTGGTCAGCGCC...GTCTATGTTTTCCTCTGTGCTTCTACCTCTTCTCACGTGCTCAGAGGGGACACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS-3UTR GCA 90 bp TGTGTCCCCTCTGAGCACGTGAGAAGAGGTAGAAGCACAGAGGAAAACATAGACGCAAGGCCCTGCTGGTaGTGCACCAGGGCAATGCCC +
Preference number: 4 (lower is better)
Translates to: CVPSEHVRRGRSTEENIDARPCW*CTRAMP
Trigger: GGGCATTGCCCTGGTGCAGCACCAGCAGGGCCTTGC...GTCTATGTTTTCCTCTGTGCTTCTACCTCTTCTCACGTGCTCAGAGGGGACACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS-3UTR GCA 90 bp GGAGTGGTTTTCATGAGGAAGCCAGGGTGCTGTGTCCCCTCTGAGCACGTGAGACCAGTGGCCATTCTTTaGTTCTCGCTGGCTCCTCTG +
Preference number: 4 (lower is better)
Translates to: GVVFMRKPGCCVPSEHVRPVAIL*FSLAPL
Trigger: CAGAGGAGCCAGCGAGAAGCAAAGAATGGCCACTGG...TCTCACGTGCTCAGAGGGGACACAGCACCCTGGCTTCCTCATGAAAACCACTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000047970.14
CDS-3UTR GCA 90 bp CCAGGAGTGGTTTTCATGAGGAAGCCAGGGTGCTGTGTCCCCTCTGAGCACGTGCTTCTGGTCCACACTTaGTGTGGCCTCGTCAATGCA +
Preference number: 4 (lower is better)
Translates to: PGVVFMRKPGCCVPSEHVLLVHT*CGLVNA
Trigger: TGCATTGACGAGGCCACAGCAAGTGTGGACCAGAAG...CACGTGCTCAGAGGGGACACAGCACCCTGGCTTCCTCATGAAAACCACTCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS-3UTR CCA 90 bp CCAGGAGTGGTTTTCATGAGGAAGCCAGGGTGCTGTGTCCCCTCTGAGCACGTGCGGAGAATCCCAGCATaGTCCCCACCATCTTCAACA +
Preference number: 4 (lower is better)
Translates to: PGVVFMRKPGCCVPSEHVRRIPA*SPPSST
Trigger: TGTTGAAGATGGTGGGGACCATGCTGGGATTCTCCG...CACGTGCTCAGAGGGGACACAGCACCCTGGCTTCCTCATGAAAACCACTCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
ENSMUST00000171584.2
CDS-3UTR CCA 90 bp CTGTGGAAGGGAAACCGGCCCCGAATTCTGAGTAAAAAGGCCCATGTGGGTTGGAGGCCCCAGGCCTCATaGAAGCTGCCAGCAAAGTTG +
Preference number: 4 (lower is better)
Translates to: LWKGNRPRILSKKAHVGWRPQAS*KLPAKL
Trigger: CAACTTTGCTGGCAGCTTCCATGAGGCCTGGGGCCT...CCAACCCACATGGGCCTTTTTACTCAGAATTCGGGGCCGGTTTCCCTTCCACAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
ENSMUST00000171584.2
CDS-3UTR CCA 90 bp GGTAGAAGCACAGAGGAAAACATAGACCAGCAGCCCTGGCGGGTGGGCGGGAAGCTGATGAAGGTCTTCTaGCTTGCTCCAATTGGGTCC +
Preference number: 4 (lower is better)
Translates to: GRSTEENIDQQPWRVGGKLMKVF*LAPIGS
Trigger: GGACCCAATTGGAGCAAGCCAGAAGACCTTCATCAG...CTTCCCGCCCACCCGCCAGGGCTGCTGGTCTATGTTTTCCTCTGTGCTTCTACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS-3UTR CCA 90 bp GGAGTGGTTTTCATGAGGAAGCCAGGGTGCTGTGTCCCCTCTGAGCACGTGAGAGGATGTTGTCTCGGATaGTGGCACACTGGATCCAGG +
Preference number: 4 (lower is better)
Translates to: GVVFMRKPGCCVPSEHVRGCCLG*WHTGSR
Trigger: CCTGGATCCAGTGTGCCACCATCCGAGACAACATCC...TCTCACGTGCTCAGAGGGGACACAGCACCCTGGCTTCCTCATGAAAACCACTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS-3UTR CCA 90 bp CCAGGAGTGGTTTTCATGAGGAAGCCAGGGTGCTGTGTCCCCTCTGAGCACGTGTCTCCAACCTCTGTCTaGTCTCCAGCAGGCAGGATA +
Preference number: 4 (lower is better)
Translates to: PGVVFMRKPGCCVPSEHVSPTSV*SPAGRI
Trigger: TATCCTGCCTGCTGGAGACCAGACAGAGGTTGGAGA...CACGTGCTCAGAGGGGACACAGCACCCTGGCTTCCTCATGAAAACCACTCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS-3UTR CCA 90 bp GTCCCCTCTGAGCACGTGAGAAGAGGTAGAAGCACAGAGGAAAACATAGACCAGAGGTACTCAGTGCGGTaGGTGCACAGCAGCCGGGTG +
Preference number: 4 (lower is better)
Translates to: VPSEHVRRGRSTEENIDQRYSVR*VHSSRV
Trigger: CACCCGGCTGCTGTGCACCCACCGCACTGAGTACCT...CTGGTCTATGTTTTCCTCTGTGCTTCTACCTCTTCTCACGTGCTCAGAGGGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS-3UTR CCA 90 bp TGTGTCCCCTCTGAGCACGTGAGAAGAGGTAGAAGCACAGAGGAAAACATAGACGGCGGTGGTGTAGGCTaGCAGCTGCTTGAAGGGCGC +
Preference number: 4 (lower is better)
Translates to: CVPSEHVRRGRSTEENIDGGGVG*QLLEGR
Trigger: GCGCCCTTCAAGCAGCTGCCAGCCTACACCACCGCC...GTCTATGTTTTCCTCTGTGCTTCTACCTCTTCTCACGTGCTCAGAGGGGACACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS-3UTR CCA 90 bp CTGTGGAAGGGAAACCGGCCCCGAATTCTGAGTAAAAAGGCCCATGTGGGTTGGTGGCTGTGGGGCTCCTaGGGAACGTCACAGGAATAC +
Preference number: 4 (lower is better)
Translates to: LWKGNRPRILSKKAHVGWWLWGS*GTSQEY
Trigger: GTATTCCTGTGACGTTCCCCAGGAGCCCCACAGCCA...CCAACCCACATGGGCCTTTTTACTCAGAATTCGGGGCCGGTTTCCCTTCCACAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS-3UTR CCA 90 bp GTTTTCATGAGGAAGCCAGGGTGCTGTGTCCCCTCTGAGCACGTGAGAAGAGGTCCAGCTCCAGCTGGCTaGTGTCCACATTGTCCAGGA +
Preference number: 4 (lower is better)
Translates to: VFMRKPGCCVPSEHVRRGPAPAG*CPHCPG
Trigger: TCCTGGACAATGTGGACACCAGCCAGCTGGAGCTGG...ACCTCTTCTCACGTGCTCAGAGGGGACACAGCACCCTGGCTTCCTCATGAAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS-3UTR CCA 90 bp GTTTTCATGAGGAAGCCAGGGTGCTGTGTCCCCTCTGAGCACGTGAGAAGAGGTCCTAGGGACAGGTTCTaGCCCCTTTCTCCCAGCTCT +
Preference number: 4 (lower is better)
Translates to: VFMRKPGCCVPSEHVRRGPRDRF*PLSPSS
Trigger: AGAGCTGGGAGAAAGGGGCCAGAACCTGTCCCTAGG...ACCTCTTCTCACGTGCTCAGAGGGGACACAGCACCCTGGCTTCCTCATGAAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS-3UTR CCA 90 bp CCAGGAGTGGTTTTCATGAGGAAGCCAGGGTGCTGTGTCCCCTCTGAGCACGTGGGTCCACACTTGCTGTaGCCTCGTCAATGCACAAGA +
Preference number: 4 (lower is better)
Translates to: PGVVFMRKPGCCVPSEHVGPHLL*PRQCTR
Trigger: TCTTGTGCATTGACGAGGCCACAGCAAGTGTGGACC...CACGTGCTCAGAGGGGACACAGCACCCTGGCTTCCTCATGAAAACCACTCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS-3UTR CCA 90 bp GGAGTGGTTTTCATGAGGAAGCCAGGGTGCTGTGTCCCCTCTGAGCACGTGAGAAGCTGGTCTGTCTTCTaGTCCACACTTGCTGTGGCC +
Preference number: 4 (lower is better)
Translates to: GVVFMRKPGCCVPSEHVRSWSVF*STLAVA
Trigger: GGCCACAGCAAGTGTGGACCAGAAGACAGACCAGCT...TCTCACGTGCTCAGAGGGGACACAGCACCCTGGCTTCCTCATGAAAACCACTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS-3UTR CCA 90 bp CCAGGAGTGGTTTTCATGAGGAAGCCAGGGTGCTGTGTCCCCTCTGAGCACGTGGTTTGCTGGAGCAGCTaGTCTGTCTTCTGGTCCACA +
Preference number: 4 (lower is better)
Translates to: PGVVFMRKPGCCVPSEHVVCWSS*SVFWST
Trigger: TGTGGACCAGAAGACAGACCAGCTGCTCCAGCAAAC...CACGTGCTCAGAGGGGACACAGCACCCTGGCTTCCTCATGAAAACCACTCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
3UTR CAA 72 bp TGGATCCAGGGTTCCTGGGTGGCTAGTCCAAAGCCTTaGGACAGTTCTGACACTGCCACCCATCCACACAGC +
Preference number: 4 (lower is better)
Translates to: WIQGSWVASPKP*DSSDTATHPHS
Trigger: GCTGTGTGGATGGGTGGCAGTGTCAGAACTGTCCAAAGGCTTTGGACTAGCCACCCAGGAACCCTGGATCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000171584.2
CDS-3UTR TCA 90 bp ACAGCACCACATCAGCCCTTTCCAGGTACTCAGTGCGGTGGGTGCACAGCAGCCACCTCATACCCATACTaGTTCTGCAGCACAGCACTT +
Preference number: 4 (lower is better)
Translates to: TAPHQPFPGTQCGGCTAATSYPY*FCSTAL
Trigger: AAGTGCTGTGCTGCAGAATCAGTATGGGTATGAGGT...GGCTGCTGTGCACCCACCGCACTGAGTACCTGGAAAGGGCTGATGTGGTGCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000171584.2
CDS-3UTR TCA 90 bp GGAGTGGTTTTCATGAGGAAGCCAGGGTGCTGTGTCCCCTCTGAGCACGTGAGATGGCAATCACTTTGTTaGCAGGTACCAGCAGCAGCG +
Preference number: 4 (lower is better)
Translates to: GVVFMRKPGCCVPSEHVRWQSLC*QVPAAA
Trigger: CGCTGCTGCTGGTACCTGTCAACAAAGTGATTGCCA...TCTCACGTGCTCAGAGGGGACACAGCACCCTGGCTTCCTCATGAAAACCACTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
ENSMUST00000171584.2
CDS-3UTR TCA 90 bp CTGTGGAAGGGAAACCGGCCCCGAATTCTGAGTAAAAAGGCCCATGTGGGTTGGAGATGGGGACTGGCCTaGGGTAGCCACTTGTTCCTT +
Preference number: 4 (lower is better)
Translates to: LWKGNRPRILSKKAHVGWRWGLA*GSHLFL
Trigger: AAGGAACAAGTGGCTACCTCAGGCCAGTCCCCATCT...CCAACCCACATGGGCCTTTTTACTCAGAATTCGGGGCCGGTTTCCCTTCCACAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS-3UTR TCA 90 bp CCAGGAGTGGTTTTCATGAGGAAGCCAGGGTGCTGTGTCCCCTCTGAGCACGTGTGGTTGCATACACGATaGGGTAGAAGTGGACGTCTG +
Preference number: 4 (lower is better)
Translates to: PGVVFMRKPGCCVPSEHVWLHTR*GRSGRL
Trigger: CAGACGTCCACTTCTACCTCATCGTGTATGCAACCA...CACGTGCTCAGAGGGGACACAGCACCCTGGCTTCCTCATGAAAACCACTCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS-3UTR GCA 90 bp TGTGTCCCCTCTGAGCACGTGAGAAGAGGTAGAAGCACAGAGGAAAACATAGACAAGGAGGAAGGATGCTaGGAGTCGGAGGCGCCAGCC +
Preference number: 4 (lower is better)
Translates to: CVPSEHVRRGRSTEENIDKEEGC*ESEAPA
Trigger: GGCTGGCGCCTCCGACTCGCAGCATCCTTCCTCCTT...GTCTATGTTTTCCTCTGTGCTTCTACCTCTTCTCACGTGCTCAGAGGGGACACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
ENSMUST00000171584.2
CDS-3UTR GCA 90 bp TGCTCCCACCTGAAGAATTTGATGACTCGAATGCCACTCAGTAACTCTGTCATGTGGTCCCCCAGGGGCTaGCCAGCCCAACCCATAGGC +
Preference number: 4 (lower is better)
Translates to: CSHLKNLMTRMPLSNSVMWSPRG*PAQPIG
Trigger: GCCTATGGGTTGGGCTGGGCAGCCCCTGGGGGACCA...CATGACAGAGTTACTGAGTGGCATTCGAGTCATCAAATTCTTCAGGTGGGAGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000171584.2
CDS-3UTR GCA 90 bp CCAGGAGTGGTTTTCATGAGGAAGCCAGGGTGCTGTGTCCCCTCTGAGCACGTGACGAGCAAGCAAGGGTaGCAACCAGGCATAGGAAAA +
Preference number: 4 (lower is better)
Translates to: PGVVFMRKPGCCVPSEHVTSKQG*QPGIGK
Trigger: TTTTCCTATGCCTGGTTGGCACCCTTGCTTGCTCGT...CACGTGCTCAGAGGGGACACAGCACCCTGGCTTCCTCATGAAAACCACTCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
ENSMUST00000171584.2
CDS-3UTR GCA 90 bp GTTTTCATGAGGAAGCCAGGGTGCTGTGTCCCCTCTGAGCACGTGAGAAGAGGTCCCCTCCTTCCAATGTaGTTGGAAAACTCGGGCCAG +
Preference number: 4 (lower is better)
Translates to: VFMRKPGCCVPSEHVRRGPLLPM*LENSGQ
Trigger: CTGGCCCGAGTTTTCCAAGCACATTGGAAGGAGGGG...ACCTCTTCTCACGTGCTCAGAGGGGACACAGCACCCTGGCTTCCTCATGAAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
ENSMUST00000171584.2
CDS-3UTR GCA 90 bp GACCAATTGCCCGGCTTCCATCAACAGCACCACATCAGCCCTTTCCAGGTACTCCCCCTCCTTCCAATGTaGTTGGAAAACTCGGGCCAG +
Preference number: 4 (lower is better)
Translates to: DQLPGFHQQHHISPFQVLPLLPM*LENSGQ
Trigger: CTGGCCCGAGTTTTCCAAGCACATTGGAAGGAGGGG...GAGTACCTGGAAAGGGCTGATGTGGTGCTGTTGATGGAAGCCGGGCAATTGGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000171584.2
CDS-3UTR GCA 90 bp CAGCAGCCAGAGGGTCGTCGAGGAGATAGAGTGCTTTCTCCTAGACAGAATGGAGCCTCTCGGAGTCGGTaGCTAGTAGGTTCAGGACCT +
Preference number: 4 (lower is better)
Translates to: QQPEGRRGDRVLSPRQNGASRSR*LVGSGP
Trigger: AGGTCCTGAACCTACTAGGCACCGACTCCGAGAGGC...TCCATTCTGTCTAGGAGAAAGCACTCTATCTCCTCGACGACCCTCTGGCTGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000171584.2
CDS-3UTR GCA 90 bp GTCCCCTCTGAGCACGTGAGAAGAGGTAGAAGCACAGAGGAAAACATAGACCAGCAGCCAGGAAGGCCATaGCCACCTGCTGGTACAGCA +
Preference number: 4 (lower is better)
Translates to: VPSEHVRRGRSTEENIDQQPGRP*PPAGTA
Trigger: TGCTGTACCAGCAGGTGGGCATGGCCTTCCTGGCTG...CTGGTCTATGTTTTCCTCTGTGCTTCTACCTCTTCTCACGTGCTCAGAGGGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
ENSMUST00000171584.2
CDS-3UTR GCA 90 bp GTTTTCATGAGGAAGCCAGGGTGCTGTGTCCCCTCTGAGCACGTGAGAAGAGGTTTGGAAGCAGCCTTGTaGAGTGGGGTGCTGAGCAGT +
Preference number: 4 (lower is better)
Translates to: VFMRKPGCCVPSEHVRRGLEAAL*SGVLSS
Trigger: ACTGCTCAGCACCCCACTGCACAAGGCTGCTTCCAA...ACCTCTTCTCACGTGCTCAGAGGGGACACAGCACCCTGGCTTCCTCATGAAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS-3UTR GCA 90 bp TGTGTCCCCTCTGAGCACGTGAGAAGAGGTAGAAGCACAGAGGAAAACATAGACCAGCCCGGAGAAGGGTaGAGAGGGAGTTCACCCCTG +
Preference number: 4 (lower is better)
Translates to: CVPSEHVRRGRSTEENIDQPGEG*RGSSPL
Trigger: CAGGGGTGAACTCCCTCTGCACCCTTCTCCGGGCTG...GTCTATGTTTTCCTCTGTGCTTCTACCTCTTCTCACGTGCTCAGAGGGGACACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS-3UTR GCA 90 bp GTCCCCTCTGAGCACGTGAGAAGAGGTAGAAGCACAGAGGAAAACATAGACCAGTGCTTGAAGGGCGCCTaGTGCAAAGAGCACAGCCCG +
Preference number: 4 (lower is better)
Translates to: VPSEHVRRGRSTEENIDQCLKGA*CKEHSP
Trigger: CGGGCTGTGCTCTTTGCAGCAGGCGCCCTTCAAGCA...CTGGTCTATGTTTTCCTCTGTGCTTCTACCTCTTCTCACGTGCTCAGAGGGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS-3UTR GCA 90 bp TGTGTCCCCTCTGAGCACGTGAGAAGAGGTAGAAGCACAGAGGAAAACATAGACCTGTGCGGCCCACGATaGCCAGCTTCTCTCCAGGCT +
Preference number: 4 (lower is better)
Translates to: CVPSEHVRRGRSTEENIDLCGPR*PASLQA
Trigger: AGCCTGGAGAGAAGCTGGGCATCGTGGGCCGCACAG...GTCTATGTTTTCCTCTGTGCTTCTACCTCTTCTCACGTGCTCAGAGGGGACACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS-3UTR GCA 90 bp GTCCCCTCTGAGCACGTGAGAAGAGGTAGAAGCACAGAGGAAAACATAGACCAGCACTGTTCCAAGGCTTaGCACAGGGCCCTGTCCTCG +
Preference number: 4 (lower is better)
Translates to: VPSEHVRRGRSTEENIDQHCSKA*HRALSS
Trigger: CGAGGACAGGGCCCTGTGGCAAGCCTTGGAACAGTG...CTGGTCTATGTTTTCCTCTGTGCTTCTACCTCTTCTCACGTGCTCAGAGGGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS-3UTR GCA 90 bp CCAGGAGTGGTTTTCATGAGGAAGCCAGGGTGCTGTGTCCCCTCTGAGCACGTGCGTTTACAGATGGTTTaGTGGAGCAGCTGGTCTGTC +
Preference number: 4 (lower is better)
Translates to: PGVVFMRKPGCCVPSEHVRLQMV*WSSWSV
Trigger: GACAGACCAGCTGCTCCAGCAAACCATCTGTAAACG...CACGTGCTCAGAGGGGACACAGCACCCTGGCTTCCTCATGAAAACCACTCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS-3UTR GCA 90 bp TGTGTCCCCTCTGAGCACGTGAGAAGAGGTAGAAGCACAGAGGAAAACATAGACTGCTGGAACAGGGAGTaGGGCTGGTTGCGCAGGGCT +
Preference number: 4 (lower is better)
Translates to: CVPSEHVRRGRSTEENIDCWNRE*GWLRRA
Trigger: AGCCCTGCGCAACCAGCCGCACTCCCTGTTCCAGCA...GTCTATGTTTTCCTCTGTGCTTCTACCTCTTCTCACGTGCTCAGAGGGGACACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS-3UTR CCA 90 bp TGTGTCCCCTCTGAGCACGTGAGAAGAGGTAGAAGCACAGAGGAAAACATAGACAGCTGGGTGAAGCAGTaGCCCGTCGTGTCCCCTTCC +
Preference number: 4 (lower is better)
Translates to: CVPSEHVRRGRSTEENIDSWVKQ*PVVSPS
Trigger: GGAAGGGGACACGACGGGCCACTGCTTCACCCAGCT...GTCTATGTTTTCCTCTGTGCTTCTACCTCTTCTCACGTGCTCAGAGGGGACACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
ENSMUST00000171584.2
CDS-3UTR CCA 90 bp CCTAGACCCAGGTGTCAAGGCAACTGGAAAAGACAGGTGCGAACAACTCTAGAACACAGGGCCAGGCTGTaGGTGAACCAGGCCACAGCT +
Preference number: 4 (lower is better)
Translates to: PRPRCQGNWKRQVRTTLEHRARL*VNQATA
Trigger: AGCTGTGGCCTGGTTCACCCACAGCCTGGCCCTGTG...TTCTAGAGTTGTTCGCACCTGTCTTTTCCAGTTGCCTTGACACCTGGGTCTAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000171584.2
CDS-3UTR CCA 90 bp GGTAGAAGCACAGAGGAAAACATAGACCAGCAGCCCTGGCGGGTGGGCGGGAAGAGAAATGTACCTCGCTaGCAATGCCACAGCAGAGTT +
Preference number: 4 (lower is better)
Translates to: GRSTEENIDQQPWRVGGKRNVPR*QCHSRV
Trigger: AACTCTGCTGTGGCATTGCCAGCGAGGTACATTTCT...CTTCCCGCCCACCCGCCAGGGCTGCTGGTCTATGTTTTCCTCTGTGCTTCTACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
ENSMUST00000171584.2
CDS-3UTR CCA 90 bp GTTTTCATGAGGAAGCCAGGGTGCTGTGTCCCCTCTGAGCACGTGAGAAGAGGTTGCCGTAGCATCTCCTaGTTGCTGGCCATGATTCGG +
Preference number: 4 (lower is better)
Translates to: VFMRKPGCCVPSEHVRRGCRSIS*LLAMIR
Trigger: CCGAATCATGGCCAGCAACCAGGAGATGCTACGGCA...ACCTCTTCTCACGTGCTCAGAGGGGACACAGCACCCTGGCTTCCTCATGAAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
ENSMUST00000171584.2
CDS-3UTR CCA 90 bp GGAGTGGTTTTCATGAGGAAGCCAGGGTGCTGTGTCCCCTCTGAGCACGTGAGAAGATCGAGGAAACGCTaGATCCGGTCCAGGGATACT +
Preference number: 4 (lower is better)
Translates to: GVVFMRKPGCCVPSEHVRRSRKR*IRSRDT
Trigger: AGTATCCCTGGACCGGATCCAGCGTTTCCTCGATCT...TCTCACGTGCTCAGAGGGGACACAGCACCCTGGCTTCCTCATGAAAACCACTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS-3UTR CCA 90 bp TGTGTCCCCTCTGAGCACGTGAGAAGAGGTAGAAGCACAGAGGAAAACATAGACAGCAGCCGGGTGGTGTaGCTCAGCACTCCCAGGATG +
Preference number: 4 (lower is better)
Translates to: CVPSEHVRRGRSTEENIDSSRVV*LSTPRM
Trigger: CATCCTGGGAGTGCTGAGCCACACCACCCGGCTGCT...GTCTATGTTTTCCTCTGTGCTTCTACCTCTTCTCACGTGCTCAGAGGGGACACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS-3UTR CCA 90 bp GTTTTCATGAGGAAGCCAGGGTGCTGTGTCCCCTCTGAGCACGTGAGAAGAGGTGAAGAGAAGCAGCCGTaGGGAGAAGAGTGCTGTGGA +
Preference number: 4 (lower is better)
Translates to: VFMRKPGCCVPSEHVRRGEEKQP*GEECCG
Trigger: TCCACAGCACTCTTCTCCCCACGGCTGCTTCTCTTC...ACCTCTTCTCACGTGCTCAGAGGGGACACAGCACCCTGGCTTCCTCATGAAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS-3UTR CCA 90 bp GTTTTCATGAGGAAGCCAGGGTGCTGTGTCCCCTCTGAGCACGTGAGAAGAGGTGCAAACTGGCACCTCTaGTTCAGCTCCAAGAGTCGC +
Preference number: 4 (lower is better)
Translates to: VFMRKPGCCVPSEHVRRGANWHL*FSSKSR
Trigger: GCGACTCTTGGAGCTGAACCAGAGGTGCCAGTTTGC...ACCTCTTCTCACGTGCTCAGAGGGGACACAGCACCCTGGCTTCCTCATGAAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS-3UTR CCA 90 bp CTGTGGAAGGGAAACCGGCCCCGAATTCTGAGTAAAAAGGCCCATGTGGGTTGGAATTCCACACTTCCCTaGGTCAGCCAGCTGATGCGC +
Preference number: 4 (lower is better)
Translates to: LWKGNRPRILSKKAHVGWNSTLP*VSQLMR
Trigger: GCGCATCAGCTGGCTGACCCAGGGAAGTGTGGAATT...CCAACCCACATGGGCCTTTTTACTCAGAATTCGGGGCCGGTTTCCCTTCCACAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS-3UTR CCA 90 bp TGTGTCCCCTCTGAGCACGTGAGAAGAGGTAGAAGCACAGAGGAAAACATAGACTCCTCGTGTAGGCCCTaGGGGTCCAGGTTCTCCCGA +
Preference number: 4 (lower is better)
Translates to: CVPSEHVRRGRSTEENIDSSCRP*GSRFSR
Trigger: TCGGGAGAACCTGGACCCCCAGGGCCTACACGAGGA...GTCTATGTTTTCCTCTGTGCTTCTACCTCTTCTCACGTGCTCAGAGGGGACACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS-3UTR CCA 90 bp GGAGTGGTTTTCATGAGGAAGCCAGGGTGCTGTGTCCCCTCTGAGCACGTGAGAGGTCCACACTTGCTGTaGCCTCGTCAATGCACAAGA +
Preference number: 4 (lower is better)
Translates to: GVVFMRKPGCCVPSEHVRGPHLL*PRQCTR
Trigger: TCTTGTGCATTGACGAGGCCACAGCAAGTGTGGACC...TCTCACGTGCTCAGAGGGGACACAGCACCCTGGCTTCCTCATGAAAACCACTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS-3UTR CCA 90 bp GTTTTCATGAGGAAGCCAGGGTGCTGTGTCCCCTCTGAGCACGTGAGAAGAGGTAGCTGGTCTGTCTTCTaGTCCACACTTGCTGTGGCC +
Preference number: 4 (lower is better)
Translates to: VFMRKPGCCVPSEHVRRGSWSVF*STLAVA
Trigger: GGCCACAGCAAGTGTGGACCAGAAGACAGACCAGCT...ACCTCTTCTCACGTGCTCAGAGGGGACACAGCACCCTGGCTTCCTCATGAAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS-3UTR CCA 90 bp TGTGTCCCCTCTGAGCACGTGAGAAGAGGTAGAAGCACAGAGGAAAACATAGACCTCTGCAGGAGCTGCTaGAACAGGGAGTGCGGCTGG +
Preference number: 4 (lower is better)
Translates to: CVPSEHVRRGRSTEENIDLCRSC*NRECGW
Trigger: CCAGCCGCACTCCCTGTTCCAGCAGCTCCTGCAGAG...GTCTATGTTTTCCTCTGTGCTTCTACCTCTTCTCACGTGCTCAGAGGGGACACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS-3UTR TCA 90 bp GTTTTCATGAGGAAGCCAGGGTGCTGTGTCCCCTCTGAGCACGTGAGAAGAGGTGGCATAGGAAAAGCGTaGCAGCCAACTCTCTCCATC +
Preference number: 4 (lower is better)
Translates to: VFMRKPGCCVPSEHVRRGGIGKA*QPTLSI
Trigger: GATGGAGAGAGTTGGCTGTCACGCTTTTCCTATGCC...ACCTCTTCTCACGTGCTCAGAGGGGACACAGCACCCTGGCTTCCTCATGAAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
ENSMUST00000171584.2
CDS-3UTR TCA 90 bp GCTCCAGTGCCCCAGACCTTTATTTTTGCCTTGAACCTGGTAGACAGCACGGGCGGCATAGGAAAAGCGTaGCAGCCAACTCTCTCCATC +
Preference number: 4 (lower is better)
Translates to: APVPQTFIFALNLVDSTGGIGKA*QPTLSI
Trigger: GATGGAGAGAGTTGGCTGTCACGCTTTTCCTATGCC...GCCCGTGCTGTCTACCAGGTTCAAGGCAAAAATAAAGGTCTGGGGCACTGGAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000171584.2
CDS-3UTR TCA 90 bp GTCCCCTCTGAGCACGTGAGAAGAGGTAGAAGCACAGAGGAAAACATAGACCAGTGGCTTAGAGGCTCTTaGCCTTCCTCCAGGAAGCCC +
Preference number: 4 (lower is better)
Translates to: VPSEHVRRGRSTEENIDQWLRGS*PSSRKP
Trigger: GGGCTTCCTGGAGGAAGGTCAAGAGCCTCTAAGCCA...CTGGTCTATGTTTTCCTCTGTGCTTCTACCTCTTCTCACGTGCTCAGAGGGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
ENSMUST00000171584.2
CDS-3UTR TCA 90 bp CCAGGAGTGGTTTTCATGAGGAAGCCAGGGTGCTGTGTCCCCTCTGAGCACGTGACCTCATACCCATACTaGTTCTGCAGCACAGCACTT +
Preference number: 4 (lower is better)
Translates to: PGVVFMRKPGCCVPSEHVTSYPY*FCSTAL
Trigger: AAGTGCTGTGCTGCAGAATCAGTATGGGTATGAGGT...CACGTGCTCAGAGGGGACACAGCACCCTGGCTTCCTCATGAAAACCACTCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
ENSMUST00000171584.2
CDS-3UTR TCA 90 bp CTGTGGAAGGGAAACCGGCCCCGAATTCTGAGTAAAAAGGCCCATGTGGGTTGGTGGCAATCACTTTGTTaGCAGGTACCAGCAGCAGCG +
Preference number: 4 (lower is better)
Translates to: LWKGNRPRILSKKAHVGWWQSLC*QVPAAA
Trigger: CGCTGCTGCTGGTACCTGTCAACAAAGTGATTGCCA...CCAACCCACATGGGCCTTTTTACTCAGAATTCGGGGCCGGTTTCCCTTCCACAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
ENSMUST00000171584.2
CDS-3UTR TCA 90 bp GGTAGAAGCACAGAGGAAAACATAGACCAGCAGCCCTGGCGGGTGGGCGGGAAGACCTCCCTGTATAGTTaGGCATCAAATGTCTTCCCA +
Preference number: 4 (lower is better)
Translates to: GRSTEENIDQQPWRVGGKTSLYS*ASNVFP
Trigger: TGGGAAGACATTTGATGCTCAACTATACAGGGAGGT...CTTCCCGCCCACCCGCCAGGGCTGCTGGTCTATGTTTTCCTCTGTGCTTCTACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS-3UTR TCA 90 bp TGTGTCCCCTCTGAGCACGTGAGAAGAGGTAGAAGCACAGAGGAAAACATAGACTGCGCGTGGCTTGCATaGGGAGCAGAGAGACGAGGA +
Preference number: 4 (lower is better)
Translates to: CVPSEHVRRGRSTEENIDCAWLA*GAERRG
Trigger: TCCTCGTCTCTCTGCTCCTCATGCAAGCCACGCGCA...GTCTATGTTTTCCTCTGTGCTTCTACCTCTTCTCACGTGCTCAGAGGGGACACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS-3UTR TCA 90 bp GTCCCCTCTGAGCACGTGAGAAGAGGTAGAAGCACAGAGGAAAACATAGACCAGTGGCTTCCGTCTGTGTaGAACTGCTCACCAGACCCG +
Preference number: 4 (lower is better)
Translates to: VPSEHVRRGRSTEENIDQWLPSV*NCSPDP
Trigger: CGGGTCTGGTGAGCAGTTTCACACAGACGGAAGCCA...CTGGTCTATGTTTTCCTCTGTGCTTCTACCTCTTCTCACGTGCTCAGAGGGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS-3UTR GCA 90 bp TGTGTCCCCTCTGAGCACGTGAGAAGAGGTAGAAGCACAGAGGAAAACATAGACGGAAAGGAGGAAGGATaGTGCGAGTCGGAGGCGCCA +
Preference number: 4 (lower is better)
Translates to: CVPSEHVRRGRSTEENIDGKEEG*CESEAP
Trigger: TGGCGCCTCCGACTCGCAGCATCCTTCCTCCTTTCC...GTCTATGTTTTCCTCTGTGCTTCTACCTCTTCTCACGTGCTCAGAGGGGACACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
ENSMUST00000171584.2
CDS-3UTR GCA 90 bp TGTGTCCCCTCTGAGCACGTGAGAAGAGGTAGAAGCACAGAGGAAAACATAGACAGGGGAATGAACCAGTaGCCACAGGGCCAGGCTGTG +
Preference number: 4 (lower is better)
Translates to: CVPSEHVRRGRSTEENIDRGMNQ*PQGQAV
Trigger: CACAGCCTGGCCCTGTGGGCACTGGTTCATTCCCCT...GTCTATGTTTTCCTCTGTGCTTCTACCTCTTCTCACGTGCTCAGAGGGGACACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
ENSMUST00000171584.2
CDS-3UTR GCA 90 bp GGTAGAAGCACAGAGGAAAACATAGACCAGCAGCCCTGGCGGGTGGGCGGGAAGAAGACTGCTGCCAGTTaGAGAATGAGAAGACACACA +
Preference number: 4 (lower is better)
Translates to: GRSTEENIDQQPWRVGGKKTAAS*RMRRHT
Trigger: TGTGTGTCTTCTCATTCTGCAACTGGCAGCAGTCTT...CTTCCCGCCCACCCGCCAGGGCTGCTGGTCTATGTTTTCCTCTGTGCTTCTACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
ENSMUST00000171584.2
CDS-3UTR GCA 90 bp CTGTGGAAGGGAAACCGGCCCCGAATTCTGAGTAAAAAGGCCCATGTGGGTTGGCCCATAGGCCAAGACTaGTGCCAGTTGCAGAATGAG +
Preference number: 4 (lower is better)
Translates to: LWKGNRPRILSKKAHVGWPIGQD*CQLQNE
Trigger: CTCATTCTGCAACTGGCAGCAGTCTTGGCCTATGGG...CCAACCCACATGGGCCTTTTTACTCAGAATTCGGGGCCGGTTTCCCTTCCACAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
ENSMUST00000171584.2
CDS-3UTR GCA 90 bp GTTTTCATGAGGAAGCCAGGGTGCTGTGTCCCCTCTGAGCACGTGAGAAGAGGTGAAGGTCTTCTGGCTTaGTCCAATTGGGTCCCAGGA +
Preference number: 4 (lower is better)
Translates to: VFMRKPGCCVPSEHVRRGEGLLA*SNWVPG
Trigger: TCCTGGGACCCAATTGGAGCAAGCCAGAAGACCTTC...ACCTCTTCTCACGTGCTCAGAGGGGACACAGCACCCTGGCTTCCTCATGAAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS-3UTR GCA 90 bp GTTTTCATGAGGAAGCCAGGGTGCTGTGTCCCCTCTGAGCACGTGAGAAGAGGTTCAGCACTCCCAGGATaGACCTGTGTAACAGGTGGT +
Preference number: 4 (lower is better)
Translates to: VFMRKPGCCVPSEHVRRGSALPG*TCVTGG
Trigger: ACCACCTGTTACACAGGTGCATCCTGGGAGTGCTGA...ACCTCTTCTCACGTGCTCAGAGGGGACACAGCACCCTGGCTTCCTCATGAAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS-3UTR GCA 90 bp GTCCCCTCTGAGCACGTGAGAAGAGGTAGAAGCACAGAGGAAAACATAGACCAGGCTGCCCCCATGAGCTaGAGTCGAATGTCCAACCAC +
Preference number: 4 (lower is better)
Translates to: VPSEHVRRGRSTEENIDQAAPMS*SRMSNH
Trigger: GTGGTTGGACATTCGACTGCAGCTCATGGGGGCAGC...CTGGTCTATGTTTTCCTCTGTGCTTCTACCTCTTCTCACGTGCTCAGAGGGGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS-3UTR GCA 90 bp TGTGTCCCCTCTGAGCACGTGAGAAGAGGTAGAAGCACAGAGGAAAACATAGACCACTGTTCCAAGGCTTaGCACAGGGCCCTGTCCTCG +
Preference number: 4 (lower is better)
Translates to: CVPSEHVRRGRSTEENIDHCSKA*HRALSS
Trigger: CGAGGACAGGGCCCTGTGGCAAGCCTTGGAACAGTG...GTCTATGTTTTCCTCTGTGCTTCTACCTCTTCTCACGTGCTCAGAGGGGACACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS-3UTR GCA 90 bp TGTGTCCCCTCTGAGCACGTGAGAAGAGGTAGAAGCACAGAGGAAAACATAGACCTGGCTCCTCTGACATaGCTGGGACTCACCCATGGC +
Preference number: 4 (lower is better)
Translates to: CVPSEHVRRGRSTEENIDLAPLT*LGLTHG
Trigger: GCCATGGGTGAGTCCCAGGCATGTCAGAGGAGCCAG...GTCTATGTTTTCCTCTGTGCTTCTACCTCTTCTCACGTGCTCAGAGGGGACACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000047970.14
CDS-3UTR GCA 90 bp GGAGTGGTTTTCATGAGGAAGCCAGGGTGCTGTGTCCCCTCTGAGCACGTGAGAAGCAGAGCACTGCATTaGCAGTGGCCATTCTTTGCT +
Preference number: 4 (lower is better)
Translates to: GVVFMRKPGCCVPSEHVRSRALH*QWPFFA
Trigger: AGCAAAGAATGGCCACTGGCAATGCAGTGCTCTGCT...TCTCACGTGCTCAGAGGGGACACAGCACCCTGGCTTCCTCATGAAAACCACTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000047970.14
CDS-3UTR CCA 90 bp CTGTGGAAGGGAAACCGGCCCCGAATTCTGAGTAAAAAGGCCCATGTGGGTTGGCGGAGAATCCCAGCATaGTCCCCACCATCTTCAACA +
Preference number: 4 (lower is better)
Translates to: LWKGNRPRILSKKAHVGWRRIPA*SPPSST
Trigger: TGTTGAAGATGGTGGGGACCATGCTGGGATTCTCCG...CCAACCCACATGGGCCTTTTTACTCAGAATTCGGGGCCGGTTTCCCTTCCACAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
ENSMUST00000171584.2
CDS-3UTR CCA 90 bp GTCGTCGAGGAGATAGAGTGCTTTCTCCTAGACAGAATGGACAGCAGGCACCATAGGCCCCAGGCCTCATaGAAGCTGCCAGCAAAGTTG +
Preference number: 4 (lower is better)
Translates to: VVEEIECFLLDRMDSRHHRPQAS*KLPAKL
Trigger: CAACTTTGCTGGCAGCTTCCATGAGGCCTGGGGCCT...ATGGTGCCTGCTGTCCATTCTGTCTAGGAGAAAGCACTCTATCTCCTCGACGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000171584.2
CDS-3UTR CCA 90 bp GTCCCCTCTGAGCACGTGAGAAGAGGTAGAAGCACAGAGGAAAACATAGACCAGGATGCAGATGACCACTaGCAGGGCAGCCCAGAGGTA +
Preference number: 4 (lower is better)
Translates to: VPSEHVRRGRSTEENIDQDADDH*QGSPEV
Trigger: TACCTCTGGGCTGCCCTGCCAGTGGTCATCTGCATC...CTGGTCTATGTTTTCCTCTGTGCTTCTACCTCTTCTCACGTGCTCAGAGGGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS-3UTR CCA 90 bp GTTTTCATGAGGAAGCCAGGGTGCTGTGTCCCCTCTGAGCACGTGAGAAGAGGTAGATCGAGGAAACGCTaGATCCGGTCCAGGGATACT +
Preference number: 4 (lower is better)
Translates to: VFMRKPGCCVPSEHVRRGRSRKR*IRSRDT
Trigger: AGTATCCCTGGACCGGATCCAGCGTTTCCTCGATCT...ACCTCTTCTCACGTGCTCAGAGGGGACACAGCACCCTGGCTTCCTCATGAAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS-3UTR CCA 90 bp CTGTGGAAGGGAAACCGGCCCCGAATTCTGAGTAAAAAGGCCCATGTGGGTTGGCTCAGGGCTGTAGCTTaGAAGATCGAGGAAACGCTG +
Preference number: 4 (lower is better)
Translates to: LWKGNRPRILSKKAHVGWLRAVA*KIEETL
Trigger: CAGCGTTTCCTCGATCTTCCAAGCTACAGCCCTGAG...CCAACCCACATGGGCCTTTTTACTCAGAATTCGGGGCCGGTTTCCCTTCCACAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS-3UTR CCA 90 bp CCAGGAGTGGTTTTCATGAGGAAGCCAGGGTGCTGTGTCCCCTCTGAGCACGTGCTAGTCCAAAGCCTTTaGACAGTTCTGACACTGCCA +
Preference number: 4 (lower is better)
Translates to: PGVVFMRKPGCCVPSEHVLVQSL*TVLTLP
Trigger: TGGCAGTGTCAGAACTGTCCAAAGGCTTTGGACTAG...CACGTGCTCAGAGGGGACACAGCACCCTGGCTTCCTCATGAAAACCACTCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS-3UTR CCA 90 bp CTGTGGAAGGGAAACCGGCCCCGAATTCTGAGTAAAAAGGCCCATGTGGGTTGGTGTTGTCTCGGATGGTaGCACACTGGATCCAGGGTT +
Preference number: 4 (lower is better)
Translates to: LWKGNRPRILSKKAHVGWCCLGW*HTGSRV
Trigger: AACCCTGGATCCAGTGTGCCACCATCCGAGACAACA...CCAACCCACATGGGCCTTTTTACTCAGAATTCGGGGCCGGTTTCCCTTCCACAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS-3UTR CCA 90 bp TGTGTCCCCTCTGAGCACGTGAGAAGAGGTAGAAGCACAGAGGAAAACATAGACGAGTGCTGTGGAGCCTaGGCTGCAGGAAGCTGGATC +
Preference number: 4 (lower is better)
Translates to: CVPSEHVRRGRSTEENIDECCGA*AAGSWI
Trigger: GATCCAGCTTCCTGCAGCCCAGGCTCCACAGCACTC...GTCTATGTTTTCCTCTGTGCTTCTACCTCTTCTCACGTGCTCAGAGGGGACACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS-3UTR CCA 90 bp TGTGTCCCCTCTGAGCACGTGAGAAGAGGTAGAAGCACAGAGGAAAACATAGACGGGAGAAGAGTGCTGTaGAGCCTGGGCTGCAGGAAG +
Preference number: 4 (lower is better)
Translates to: CVPSEHVRRGRSTEENIDGRRVL*SLGCRK
Trigger: CTTCCTGCAGCCCAGGCTCCACAGCACTCTTCTCCC...GTCTATGTTTTCCTCTGTGCTTCTACCTCTTCTCACGTGCTCAGAGGGGACACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS-3UTR CCA 90 bp CCAGGAGTGGTTTTCATGAGGAAGCCAGGGTGCTGTGTCCCCTCTGAGCACGTGTTACAGATGGTTTGCTaGAGCAGCTGGTCTGTCTTC +
Preference number: 4 (lower is better)
Translates to: PGVVFMRKPGCCVPSEHVLQMVC*SSWSVF
Trigger: GAAGACAGACCAGCTGCTCCAGCAAACCATCTGTAA...CACGTGCTCAGAGGGGACACAGCACCCTGGCTTCCTCATGAAAACCACTCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
3UTR CAA 72 bp GCAGCCCAGAGGTACACACAGGCTGCATCCAAGTATTaGATAACACGGAGTCGTCCCAGCTCTTTAGTCCGG +
Preference number: 4 (lower is better)
Translates to: AAQRYTQAASKY*ITRSRPSSLVR
Trigger: CCGGACTAAAGAGCTGGGACGACTCCGTGTTATCAAATACTTGGATGCAGCCTGTGTGTACCTCTGGGCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000171584.2
3UTR CAA 72 bp GTCTGGTCTCCAGCAGGCAGGATACTTAGATCATCATaGAGGGCGCAGGCCTCCAGAACCTCCCTGTATAGT +
Preference number: 4 (lower is better)
Translates to: VWSPAGRILRSS*RAQASRTSLYS
Trigger: ACTATACAGGGAGGTTCTGGAGGCCTGCGCCCTCAATGATGATCTAAGTATCCTGCCTGCTGGAGACCAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000171584.2
CDS-3UTR TCA 90 bp GTCCCCTCTGAGCACGTGAGAAGAGGTAGAAGCACAGAGGAAAACATAGACCAGCTGCCAGTTGCAGAATaGGAAGACACACACGGCCCA +
Preference number: 4 (lower is better)
Translates to: VPSEHVRRGRSTEENIDQLPVAE*EDTHGP
Trigger: TGGGCCGTGTGTGTCTTCTCATTCTGCAACTGGCAG...CTGGTCTATGTTTTCCTCTGTGCTTCTACCTCTTCTCACGTGCTCAGAGGGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
ENSMUST00000171584.2
CDS-3UTR TCA 90 bp GTTTTCATGAGGAAGCCAGGGTGCTGTGTCCCCTCTGAGCACGTGAGAAGAGGTGCTACCTCTGTTTCTTaGCTCTCAGAGGACAGGAAG +
Preference number: 4 (lower is better)
Translates to: VFMRKPGCCVPSEHVRRGATSVS*LSEDRK
Trigger: CTTCCTGTCCTCTGAGAGTCAAGAAACAGAGGTAGC...ACCTCTTCTCACGTGCTCAGAGGGGACACAGCACCCTGGCTTCCTCATGAAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
ENSMUST00000171584.2
CDS-3UTR TCA 90 bp GTCCCCTCTGAGCACGTGAGAAGAGGTAGAAGCACAGAGGAAAACATAGACCAGACAGCCACTCGTGCCTaGAGTGTCACTTTACGGACC +
Preference number: 4 (lower is better)
Translates to: VPSEHVRRGRSTEENIDQTATRA*SVTLRT
Trigger: GGTCCGTAAAGTGACACTTCAGGCACGAGTGGCTGT...CTGGTCTATGTTTTCCTCTGTGCTTCTACCTCTTCTCACGTGCTCAGAGGGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
ENSMUST00000171584.2
CDS-3UTR TCA 90 bp GTCCCCTCTGAGCACGTGAGAAGAGGTAGAAGCACAGAGGAAAACATAGACCAGCCTGGTTGCTGGCCATaGTTCGGGTGGCAATCACTT +
Preference number: 4 (lower is better)
Translates to: VPSEHVRRGRSTEENIDQPGCWP*FGWQSL
Trigger: AAGTGATTGCCACCCGAATCATGGCCAGCAACCAGG...CTGGTCTATGTTTTCCTCTGTGCTTCTACCTCTTCTCACGTGCTCAGAGGGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
ENSMUST00000171584.2
CDS-3UTR TCA 90 bp GGAGTGGTTTTCATGAGGAAGCCAGGGTGCTGTGTCCCCTCTGAGCACGTGAGAATTCCAAGAGACCATTaGTCACCCAGGGGAAGTTGT +
Preference number: 4 (lower is better)
Translates to: GVVFMRKPGCCVPSEHVRIPRDH*SPRGSC
Trigger: ACAACTTCCCCTGGGTGATCAATGGTCTCTTGGAAT...TCTCACGTGCTCAGAGGGGACACAGCACCCTGGCTTCCTCATGAAAACCACTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS-3UTR TCA 90 bp GTCCCCTCTGAGCACGTGAGAAGAGGTAGAAGCACAGAGGAAAACATAGACCAGGCCTTTGGACAGTTCTaGCACTGCCACCCATCCACA +
Preference number: 4 (lower is better)
Translates to: VPSEHVRRGRSTEENIDQAFGQF*HCHPST
Trigger: TGTGGATGGGTGGCAGTGTCAGAACTGTCCAAAGGC...CTGGTCTATGTTTTCCTCTGTGCTTCTACCTCTTCTCACGTGCTCAGAGGGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS-3UTR TCA 90 bp CTGTGGAAGGGAAACCGGCCCCGAATTCTGAGTAAAAAGGCCCATGTGGGTTGGTGGTTGCATACACGATaGGGTAGAAGTGGACGTCTG +
Preference number: 4 (lower is better)
Translates to: LWKGNRPRILSKKAHVGWWLHTR*GRSGRL
Trigger: CAGACGTCCACTTCTACCTCATCGTGTATGCAACCA...CCAACCCACATGGGCCTTTTTACTCAGAATTCGGGGCCGGTTTCCCTTCCACAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS-3UTR GCA 90 bp CCAGGAGTGGTTTTCATGAGGAAGCCAGGGTGCTGTGTCCCCTCTGAGCACGTGAAGACTGCTGCCAGTTaGAGAATGAGAAGACACACA +
Preference number: 4 (lower is better)
Translates to: PGVVFMRKPGCCVPSEHVKTAAS*RMRRHT
Trigger: TGTGTGTCTTCTCATTCTGCAACTGGCAGCAGTCTT...CACGTGCTCAGAGGGGACACAGCACCCTGGCTTCCTCATGAAAACCACTCCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
ENSMUST00000171584.2
CDS-3UTR GCA 90 bp TGTGTCCCCTCTGAGCACGTGAGAAGAGGTAGAAGCACAGAGGAAAACATAGACGCCTCTCGGAGTCGGTaGCTAGTAGGTTCAGGACCT +
Preference number: 4 (lower is better)
Translates to: CVPSEHVRRGRSTEENIDASRSR*LVGSGP
Trigger: AGGTCCTGAACCTACTAGGCACCGACTCCGAGAGGC...GTCTATGTTTTCCTCTGTGCTTCTACCTCTTCTCACGTGCTCAGAGGGGACACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
ENSMUST00000171584.2
CDS-3UTR GCA 90 bp TGTGTCCCCTCTGAGCACGTGAGAAGAGGTAGAAGCACAGAGGAAAACATAGACCGGTCCCCCAGAGCCTaGTCCCACCTGAAGAATTTG +
Preference number: 4 (lower is better)
Translates to: CVPSEHVRRGRSTEENIDRSPRA*SHLKNL
Trigger: CAAATTCTTCAGGTGGGAGCAGGCTCTGGGGGACCG...GTCTATGTTTTCCTCTGTGCTTCTACCTCTTCTCACGTGCTCAGAGGGGACACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS-3UTR GCA 90 bp TGTGTCCCCTCTGAGCACGTGAGAAGAGGTAGAAGCACAGAGGAAAACATAGACGCTGCCCCCATGAGCTaGAGTCGAATGTCCAACCAC +
Preference number: 4 (lower is better)
Translates to: CVPSEHVRRGRSTEENIDAAPMS*SRMSNH
Trigger: GTGGTTGGACATTCGACTGCAGCTCATGGGGGCAGC...GTCTATGTTTTCCTCTGTGCTTCTACCTCTTCTCACGTGCTCAGAGGGGACACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS-3UTR GCA 90 bp CTGTGGAAGGGAAACCGGCCCCGAATTCTGAGTAAAAAGGCCCATGTGGGTTGGCGTTTACAGATGGTTTaGTGGAGCAGCTGGTCTGTC +
Preference number: 4 (lower is better)
Translates to: LWKGNRPRILSKKAHVGWRLQMV*WSSWSV
Trigger: GACAGACCAGCTGCTCCAGCAAACCATCTGTAAACG...CCAACCCACATGGGCCTTTTTACTCAGAATTCGGGGCCGGTTTCCCTTCCACAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS-3UTR CCA 90 bp GGAGTGGTTTTCATGAGGAAGCCAGGGTGCTGTGTCCCCTCTGAGCACGTGAGAAGAAATGTACCTCGCTaGCAATGCCACAGCAGAGTT +
Preference number: 4 (lower is better)
Translates to: GVVFMRKPGCCVPSEHVRRNVPR*QCHSRV
Trigger: AACTCTGCTGTGGCATTGCCAGCGAGGTACATTTCT...TCTCACGTGCTCAGAGGGGACACAGCACCCTGGCTTCCTCATGAAAACCACTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
ENSMUST00000171584.2
CDS-3UTR CCA 90 bp GCTTTGCTGGGCTCCAGTGCCCCAGACCTTTATTTTTGCCTTGAACCTGGTAGATGCCGTAGCATCTCCTaGTTGCTGGCCATGATTCGG +
Preference number: 4 (lower is better)
Translates to: ALLGSSAPDLYFCLEPGRCRSIS*LLAMIR
Trigger: CCGAATCATGGCCAGCAACCAGGAGATGCTACGGCA...TCTACCAGGTTCAAGGCAAAAATAAAGGTCTGGGGCACTGGAGCCCAGCAAAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000171584.2
CDS-3UTR CCA 90 bp TGTGTCCCCTCTGAGCACGTGAGAAGAGGTAGAAGCACAGAGGAAAACATAGACGATGCAGATGACCACTaGCAGGGCAGCCCAGAGGTA +
Preference number: 4 (lower is better)
Translates to: CVPSEHVRRGRSTEENIDDADDH*QGSPEV
Trigger: TACCTCTGGGCTGCCCTGCCAGTGGTCATCTGCATC...GTCTATGTTTTCCTCTGTGCTTCTACCTCTTCTCACGTGCTCAGAGGGGACACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS-3UTR CCA 90 bp GTCCCCTCTGAGCACGTGAGAAGAGGTAGAAGCACAGAGGAAAACATAGACCAGTCCAGGGTTCCTGGGTaGCTAGTCCAAAGCCTTTGG +
Preference number: 4 (lower is better)
Translates to: VPSEHVRRGRSTEENIDQSRVPG*LVQSLW
Trigger: CCAAAGGCTTTGGACTAGCCACCCAGGAACCCTGGA...CTGGTCTATGTTTTCCTCTGTGCTTCTACCTCTTCTCACGTGCTCAGAGGGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS-3UTR CCA 90 bp GTTTTCATGAGGAAGCCAGGGTGCTGTGTCCCCTCTGAGCACGTGAGAAGAGGTTGTGTAACAGGTGGTTaGCCACATCTGCATCCACAG +
Preference number: 4 (lower is better)
Translates to: VFMRKPGCCVPSEHVRRGCVTGG*PHLHPQ
Trigger: CTGTGGATGCAGATGTGGCCAACCACCTGTTACACA...ACCTCTTCTCACGTGCTCAGAGGGGACACAGCACCCTGGCTTCCTCATGAAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS-3UTR CCA 90 bp GGAGTGGTTTTCATGAGGAAGCCAGGGTGCTGTGTCCCCTCTGAGCACGTGAGATTACAGATGGTTTGCTaGAGCAGCTGGTCTGTCTTC +
Preference number: 4 (lower is better)
Translates to: GVVFMRKPGCCVPSEHVRLQMVC*SSWSVF
Trigger: GAAGACAGACCAGCTGCTCCAGCAAACCATCTGTAA...TCTCACGTGCTCAGAGGGGACACAGCACCCTGGCTTCCTCATGAAAACCACTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
3UTR CAA 72 bp ACTCGGTCCCCCAGAGCCTGCTCCCACCTGAAGAATTaGATGACTCGAATGCCACTCAGTAACTCTGTCATG +
Preference number: 4 (lower is better)
Translates to: TRSPRACSHLKN*MTRMPLSNSVM
Trigger: CATGACAGAGTTACTGAGTGGCATTCGAGTCATCAAATTCTTCAGGTGGGAGCAGGCTCTGGGGGACCGAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000171584.2
CDS-3UTR TCA 90 bp TGTGTCCCCTCTGAGCACGTGAGAAGAGGTAGAAGCACAGAGGAAAACATAGACTTGAGAGCTGGGGAGTaGTTGGTAGTCCTTGGGGTG +
Preference number: 4 (lower is better)
Translates to: CVPSEHVRRGRSTEENIDLRAGE*LVVLGV
Trigger: CACCCCAAGGACTACCAATCACTCCCCAGCTCTCAA...GTCTATGTTTTCCTCTGTGCTTCTACCTCTTCTCACGTGCTCAGAGGGGACACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
ENSMUST00000171584.2
CDS-3UTR TCA 90 bp TGTGTCCCCTCTGAGCACGTGAGAAGAGGTAGAAGCACAGAGGAAAACATAGACGACAGGAAGGGATCATaGGTCCAGGGCTCTTGTGGT +
Preference number: 4 (lower is better)
Translates to: CVPSEHVRRGRSTEENIDDRKGS*VQGSCG
Trigger: ACCACAAGAGCCCTGGACTCATGATCCCTTCCTGTC...GTCTATGTTTTCCTCTGTGCTTCTACCTCTTCTCACGTGCTCAGAGGGGACACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
ENSMUST00000171584.2
CDS-3UTR TCA 90 bp CCTAGACCCAGGTGTCAAGGCAACTGGAAAAGACAGGTGCGAACAACTCTAGAAGACAGGAAGGGATCATaGGTCCAGGGCTCTTGTGGT +
Preference number: 4 (lower is better)
Translates to: PRPRCQGNWKRQVRTTLEDRKGS*VQGSCG
Trigger: ACCACAAGAGCCCTGGACTCATGATCCCTTCCTGTC...TTCTAGAGTTGTTCGCACCTGTCTTTTCCAGTTGCCTTGACACCTGGGTCTAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000171584.2
CDS-3UTR TCA 90 bp TGTGTCCCCTCTGAGCACGTGAGAAGAGGTAGAAGCACAGAGGAAAACATAGACACAGCCACTCGTGCCTaGAGTGTCACTTTACGGACC +
Preference number: 4 (lower is better)
Translates to: CVPSEHVRRGRSTEENIDTATRA*SVTLRT
Trigger: GGTCCGTAAAGTGACACTTCAGGCACGAGTGGCTGT...GTCTATGTTTTCCTCTGTGCTTCTACCTCTTCTCACGTGCTCAGAGGGGACACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
ENSMUST00000171584.2
CDS-3UTR TCA 90 bp CTGTGGAAGGGAAACCGGCCCCGAATTCTGAGTAAAAAGGCCCATGTGGGTTGGATTCCAAGAGACCATTaGTCACCCAGGGGAAGTTGT +
Preference number: 4 (lower is better)
Translates to: LWKGNRPRILSKKAHVGWIPRDH*SPRGSC
Trigger: ACAACTTCCCCTGGGTGATCAATGGTCTCTTGGAAT...CCAACCCACATGGGCCTTTTTACTCAGAATTCGGGGCCGGTTTCCCTTCCACAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS-3UTR TCA 90 bp GGAGTGGTTTTCATGAGGAAGCCAGGGTGCTGTGTCCCCTCTGAGCACGTGAGATTTTTCACTTGGAGGTaGCTGATGAAGGTCTTCTGG +
Preference number: 4 (lower is better)
Translates to: GVVFMRKPGCCVPSEHVRFFTWR*LMKVFW
Trigger: CCAGAAGACCTTCATCAGTCACCTCCAAGTGAAAAA...TCTCACGTGCTCAGAGGGGACACAGCACCCTGGCTTCCTCATGAAAACCACTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS-3UTR GCA 90 bp GTCCCCTCTGAGCACGTGAGAAGAGGTAGAAGCACAGAGGAAAACATAGACCAGCCCATAGGCCAAGACTaGTGCCAGTTGCAGAATGAG +
Preference number: 4 (lower is better)
Translates to: VPSEHVRRGRSTEENIDQPIGQD*CQLQNE
Trigger: CTCATTCTGCAACTGGCAGCAGTCTTGGCCTATGGG...CTGGTCTATGTTTTCCTCTGTGCTTCTACCTCTTCTCACGTGCTCAGAGGGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
ENSMUST00000171584.2
CDS-3UTR GCA 90 bp TGTGTCCCCTCTGAGCACGTGAGAAGAGGTAGAAGCACAGAGGAAAACATAGACTTGGAAGCAGCCTTGTaGAGTGGGGTGCTGAGCAGT +
Preference number: 4 (lower is better)
Translates to: CVPSEHVRRGRSTEENIDLEAAL*SGVLSS
Trigger: ACTGCTCAGCACCCCACTGCACAAGGCTGCTTCCAA...GTCTATGTTTTCCTCTGTGCTTCTACCTCTTCTCACGTGCTCAGAGGGGACACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS-3UTR CCA 90 bp TGTGTCCCCTCTGAGCACGTGAGAAGAGGTAGAAGCACAGAGGAAAACATAGACGGATGTTGTCTCGGATaGTGGCACACTGGATCCAGG +
Preference number: 4 (lower is better)
Translates to: CVPSEHVRRGRSTEENIDGCCLG*WHTGSR
Trigger: CCTGGATCCAGTGTGCCACCATCCGAGACAACATCC...GTCTATGTTTTCCTCTGTGCTTCTACCTCTTCTCACGTGCTCAGAGGGGACACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS-3UTR CCA 90 bp GTCCCCTCTGAGCACGTGAGAAGAGGTAGAAGCACAGAGGAAAACATAGACCAGTCTCCAACCTCTGTCTaGTCTCCAGCAGGCAGGATA +
Preference number: 4 (lower is better)
Translates to: VPSEHVRRGRSTEENIDQSPTSV*SPAGRI
Trigger: TATCCTGCCTGCTGGAGACCAGACAGAGGTTGGAGA...CTGGTCTATGTTTTCCTCTGTGCTTCTACCTCTTCTCACGTGCTCAGAGGGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS-3UTR CCA 90 bp TGTGTCCCCTCTGAGCACGTGAGAAGAGGTAGAAGCACAGAGGAAAACATAGACGAAGAGAAGCAGCCGTaGGGAGAAGAGTGCTGTGGA +
Preference number: 4 (lower is better)
Translates to: CVPSEHVRRGRSTEENIDEEKQP*GEECCG
Trigger: TCCACAGCACTCTTCTCCCCACGGCTGCTTCTCTTC...GTCTATGTTTTCCTCTGTGCTTCTACCTCTTCTCACGTGCTCAGAGGGGACACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS-3UTR CCA 90 bp TGTGTCCCCTCTGAGCACGTGAGAAGAGGTAGAAGCACAGAGGAAAACATAGACAATTCCACACTTCCCTaGGTCAGCCAGCTGATGCGC +
Preference number: 4 (lower is better)
Translates to: CVPSEHVRRGRSTEENIDNSTLP*VSQLMR
Trigger: GCGCATCAGCTGGCTGACCCAGGGAAGTGTGGAATT...GTCTATGTTTTCCTCTGTGCTTCTACCTCTTCTCACGTGCTCAGAGGGGACACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS-3UTR CCA 90 bp CTGTGGAAGGGAAACCGGCCCCGAATTCTGAGTAAAAAGGCCCATGTGGGTTGGCAAAGCGTTTACAGATaGTTTGCTGGAGCAGCTGGT +
Preference number: 4 (lower is better)
Translates to: LWKGNRPRILSKKAHVGWQSVYR*FAGAAG
Trigger: ACCAGCTGCTCCAGCAAACCATCTGTAAACGCTTTG...CCAACCCACATGGGCCTTTTTACTCAGAATTCGGGGCCGGTTTCCCTTCCACAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS-3UTR CCA 90 bp TGTGTCCCCTCTGAGCACGTGAGAAGAGGTAGAAGCACAGAGGAAAACATAGACATCGTGTTGAGCCTGTaGGCGATGGTCAGCACTGTC +
Preference number: 4 (lower is better)
Translates to: CVPSEHVRRGRSTEENIDIVLSL*AMVSTV
Trigger: GACAGTGCTGACCATCGCCCACAGGCTCAACACGAT...GTCTATGTTTTCCTCTGTGCTTCTACCTCTTCTCACGTGCTCAGAGGGGACACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS-3UTR TCA 90 bp GTCCCCTCTGAGCACGTGAGAAGAGGTAGAAGCACAGAGGAAAACATAGACCAGGCTACCTCTGTTTCTTaGCTCTCAGAGGACAGGAAG +
Preference number: 4 (lower is better)
Translates to: VPSEHVRRGRSTEENIDQATSVS*LSEDRK
Trigger: CTTCCTGTCCTCTGAGAGTCAAGAAACAGAGGTAGC...CTGGTCTATGTTTTCCTCTGTGCTTCTACCTCTTCTCACGTGCTCAGAGGGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
ENSMUST00000171584.2
CDS-3UTR GCA 90 bp TGTGTCCCCTCTGAGCACGTGAGAAGAGGTAGAAGCACAGAGGAAAACATAGACGTACCTCGCTGGCAATaGCACAGCAGAGTTAGTACC +
Preference number: 4 (lower is better)
Translates to: CVPSEHVRRGRSTEENIDVPRWQ*HSRVST
Trigger: GGTACTAACTCTGCTGTGGCATTGCCAGCGAGGTAC...GTCTATGTTTTCCTCTGTGCTTCTACCTCTTCTCACGTGCTCAGAGGGGACACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
ENSMUST00000171584.2
CDS-3UTR GCA 90 bp GTCCCCTCTGAGCACGTGAGAAGAGGTAGAAGCACAGAGGAAAACATAGACCAGACGAGCAAGCAAGGGTaGCAACCAGGCATAGGAAAA +
Preference number: 4 (lower is better)
Translates to: VPSEHVRRGRSTEENIDQTSKQG*QPGIGK
Trigger: TTTTCCTATGCCTGGTTGGCACCCTTGCTTGCTCGT...CTGGTCTATGTTTTCCTCTGTGCTTCTACCTCTTCTCACGTGCTCAGAGGGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
ENSMUST00000171584.2
CDS-3UTR GCA 90 bp GGAGTGGTTTTCATGAGGAAGCCAGGGTGCTGTGTCCCCTCTGAGCACGTGAGAGAGGTACACACAGGCTaGATCCAAGTATTTGATAAC +
Preference number: 4 (lower is better)
Translates to: GVVFMRKPGCCVPSEHVREVHTG*IQVFDN
Trigger: GTTATCAAATACTTGGATGCAGCCTGTGTGTACCTC...TCTCACGTGCTCAGAGGGGACACAGCACCCTGGCTTCCTCATGAAAACCACTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS-3UTR GCA 90 bp GTCCCCTCTGAGCACGTGAGAAGAGGTAGAAGCACAGAGGAAAACATAGACCAGGTCGAGGAGATAGAGTaGTTTCTCCTGGTAGACAGC +
Preference number: 4 (lower is better)
Translates to: VPSEHVRRGRSTEENIDQVEEIE*FLLVDS
Trigger: GCTGTCTACCAGGAGAAAGCACTCTATCTCCTCGAC...CTGGTCTATGTTTTCCTCTGTGCTTCTACCTCTTCTCACGTGCTCAGAGGGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS-3UTR GCA 90 bp TGTGTCCCCTCTGAGCACGTGAGAAGAGGTAGAAGCACAGAGGAAAACATAGACTCAGCACTCCCAGGATaGACCTGTGTAACAGGTGGT +
Preference number: 4 (lower is better)
Translates to: CVPSEHVRRGRSTEENIDSALPG*TCVTGG
Trigger: ACCACCTGTTACACAGGTGCATCCTGGGAGTGCTGA...GTCTATGTTTTCCTCTGTGCTTCTACCTCTTCTCACGTGCTCAGAGGGGACACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS-3UTR GCA 90 bp TGTGTCCCCTCTGAGCACGTGAGAAGAGGTAGAAGCACAGAGGAAAACATAGACCTTCTGGTCCACACTTaGTGTGGCCTCGTCAATGCA +
Preference number: 4 (lower is better)
Translates to: CVPSEHVRRGRSTEENIDLLVHT*CGLVNA
Trigger: TGCATTGACGAGGCCACAGCAAGTGTGGACCAGAAG...GTCTATGTTTTCCTCTGTGCTTCTACCTCTTCTCACGTGCTCAGAGGGGACACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS-3UTR CCA 90 bp GTCCCCTCTGAGCACGTGAGAAGAGGTAGAAGCACAGAGGAAAACATAGACCAGAGCTCCAAGAGTCGCTaGTTCTCCTCTTCAAACCTG +
Preference number: 4 (lower is better)
Translates to: VPSEHVRRGRSTEENIDQSSKSR*FSSSNL
Trigger: CAGGTTTGAAGAGGAGAACCAGCGACTCTTGGAGCT...CTGGTCTATGTTTTCCTCTGTGCTTCTACCTCTTCTCACGTGCTCAGAGGGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS-3UTR CCA 90 bp TGTGTCCCCTCTGAGCACGTGAGAAGAGGTAGAAGCACAGAGGAAAACATAGACGTTTGCTGGAGCAGCTaGTCTGTCTTCTGGTCCACA +
Preference number: 4 (lower is better)
Translates to: CVPSEHVRRGRSTEENIDVCWSS*SVFWST
Trigger: TGTGGACCAGAAGACAGACCAGCTGCTCCAGCAAAC...GTCTATGTTTTCCTCTGTGCTTCTACCTCTTCTCACGTGCTCAGAGGGGACACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS-3UTR CCA 90 bp CTGTGGAAGGGAAACCGGCCCCGAATTCTGAGTAAAAAGGCCCATGTGGGTTGGTCAGCACTGTCTTGTTaGCAAAGCGTTTACAGATGG +
Preference number: 4 (lower is better)
Translates to: LWKGNRPRILSKKAHVGWSALSC*QSVYRW
Trigger: CCATCTGTAAACGCTTTGCCAACAAGACAGTGCTGA...CCAACCCACATGGGCCTTTTTACTCAGAATTCGGGGCCGGTTTCCCTTCCACAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS-3UTR TCA 90 bp TGCTCCCACCTGAAGAATTTGATGACTCGAATGCCACTCAGTAACTCTGTCATGCTGCCAGTTGCAGAATaGGAAGACACACACGGCCCA +
Preference number: 4 (lower is better)
Translates to: CSHLKNLMTRMPLSNSVMLPVAE*EDTHGP
Trigger: TGGGCCGTGTGTGTCTTCTCATTCTGCAACTGGCAG...CATGACAGAGTTACTGAGTGGCATTCGAGTCATCAAATTCTTCAGGTGGGAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000171584.2
CDS-3UTR TCA 90 bp GTCCCCTCTGAGCACGTGAGAAGAGGTAGAAGCACAGAGGAAAACATAGACCAGACCTCATACCCATACTaGTTCTGCAGCACAGCACTT +
Preference number: 4 (lower is better)
Translates to: VPSEHVRRGRSTEENIDQTSYPY*FCSTAL
Trigger: AAGTGCTGTGCTGCAGAATCAGTATGGGTATGAGGT...CTGGTCTATGTTTTCCTCTGTGCTTCTACCTCTTCTCACGTGCTCAGAGGGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
ENSMUST00000171584.2
CDS-3UTR GCA 90 bp CTGTGGAAGGGAAACCGGCCCCGAATTCTGAGTAAAAAGGCCCATGTGGGTTGGGAGGTACACACAGGCTaGATCCAAGTATTTGATAAC +
Preference number: 4 (lower is better)
Translates to: LWKGNRPRILSKKAHVGWEVHTG*IQVFDN
Trigger: GTTATCAAATACTTGGATGCAGCCTGTGTGTACCTC...CCAACCCACATGGGCCTTTTTACTCAGAATTCGGGGCCGGTTTCCCTTCCACAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS-3UTR CCA 90 bp TGTGTCCCCTCTGAGCACGTGAGAAGAGGTAGAAGCACAGAGGAAAACATAGACTGTGTAACAGGTGGTTaGCCACATCTGCATCCACAG +
Preference number: 4 (lower is better)
Translates to: CVPSEHVRRGRSTEENIDCVTGG*PHLHPQ
Trigger: CTGTGGATGCAGATGTGGCCAACCACCTGTTACACA...GTCTATGTTTTCCTCTGTGCTTCTACCTCTTCTCACGTGCTCAGAGGGGACACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS-3UTR TCA 90 bp GTCCCCTCTGAGCACGTGAGAAGAGGTAGAAGCACAGAGGAAAACATAGACCAGTTTTTCACTTGGAGGTaGCTGATGAAGGTCTTCTGG +
Preference number: 4 (lower is better)
Translates to: VPSEHVRRGRSTEENIDQFFTWR*LMKVFW
Trigger: CCAGAAGACCTTCATCAGTCACCTCCAAGTGAAAAA...CTGGTCTATGTTTTCCTCTGTGCTTCTACCTCTTCTCACGTGCTCAGAGGGGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS-3UTR TCA 90 bp GTCCCCTCTGAGCACGTGAGAAGAGGTAGAAGCACAGAGGAAAACATAGACCAGACCTCCCTGTATAGTTaGGCATCAAATGTCTTCCCA +
Preference number: 4 (lower is better)
Translates to: VPSEHVRRGRSTEENIDQTSLYS*ASNVFP
Trigger: TGGGAAGACATTTGATGCTCAACTATACAGGGAGGT...CTGGTCTATGTTTTCCTCTGTGCTTCTACCTCTTCTCACGTGCTCAGAGGGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS-3UTR CCA 90 bp TGTGTCCCCTCTGAGCACGTGAGAAGAGGTAGAAGCACAGAGGAAAACATAGACCTAGTCCAAAGCCTTTaGACAGTTCTGACACTGCCA +
Preference number: 4 (lower is better)
Translates to: CVPSEHVRRGRSTEENIDLVQSL*TVLTLP
Trigger: TGGCAGTGTCAGAACTGTCCAAAGGCTTTGGACTAG...GTCTATGTTTTCCTCTGTGCTTCTACCTCTTCTCACGTGCTCAGAGGGGACACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS-3UTR CCA 90 bp GTCCCCTCTGAGCACGTGAGAAGAGGTAGAAGCACAGAGGAAAACATAGACCAGTCAGCACTGTCTTGTTaGCAAAGCGTTTACAGATGG +
Preference number: 4 (lower is better)
Translates to: VPSEHVRRGRSTEENIDQSALSC*QSVYRW
Trigger: CCATCTGTAAACGCTTTGCCAACAAGACAGTGCTGA...CTGGTCTATGTTTTCCTCTGTGCTTCTACCTCTTCTCACGTGCTCAGAGGGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS-3UTR TCA 90 bp TGCTCCCACCTGAAGAATTTGATGACTCGAATGCCACTCAGTAACTCTGTCATGGCTACCTCTGTTTCTTaGCTCTCAGAGGACAGGAAG +
Preference number: 4 (lower is better)
Translates to: CSHLKNLMTRMPLSNSVMATSVS*LSEDRK
Trigger: CTTCCTGTCCTCTGAGAGTCAAGAAACAGAGGTAGC...CATGACAGAGTTACTGAGTGGCATTCGAGTCATCAAATTCTTCAGGTGGGAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000171584.2
CDS CCA 90 bp AGGAGCGCGTGGGGAAGGGCGCTGAGCACCAGCTGGGTGAAGCAGTaGCCCGTCGTGTCCCCTTCCCACAGCGGGAGCGGCCGCGCCGCG +
Preference number: 5 (lower is better)
Translates to: RSAWGRALSTSWVKQ*PVVSPSHSGSGRAA
Trigger: CGCGGCGCGGCCGCTCCCGCTGTGGGAAGGGGACACGACGGGCCACTGCTTCACCCAGCTGGTGCTCAGCGCCCTTCCCCACGCGCTCCT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
ENSMUST00000171584.2
CDS CCA 90 bp CTGAGGACGGCGAGGAGCGCGTGGGGAAGGGCGCTGAGCACCAGCTaGGTGAAGCAGTGGCCCGTCGTGTCCCCTTCCCACAGCGGGAGC +
Preference number: 5 (lower is better)
Translates to: LRTARSAWGRALSTS*VKQWPVVSPSHSGS
Trigger: GCTCCCGCTGTGGGAAGGGGACACGACGGGCCACTGCTTCACCCAGCTGGTGCTCAGCGCCCTTCCCCACGCGCTCCTCGCCGTCCTCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
ENSMUST00000171584.2
CDS CCA 90 bp CTTGGGGTGCCCAAGTGGCAGGCACTGAGGACGGCGAGGAGCGCGTaGGGAAGGGCGCTGAGCACCAGCTGGGTGAAGCAGTGGCCCGTC +
Preference number: 5 (lower is better)
Translates to: LGVPKWQALRTARSA*GRALSTSWVKQWPV
Trigger: GACGGGCCACTGCTTCACCCAGCTGGTGCTCAGCGCCCTTCCCCACGCGCTCCTCGCCGTCCTCAGTGCCTGCCACTTGGGCACCCCAAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
ENSMUST00000171584.2
CDS CCA 90 bp GCAGGATGCAGCCTGCGGGGGAGGCGGCAAGTGTCCCGGGGCTGCTaGAGCTCTCCTCGGACTCCACGAGCAAGCAAGGGTGCCAACCAG +
Preference number: 5 (lower is better)
Translates to: AGCSLRGRRQVSRGC*SSPRTPRASKGANQ
Trigger: CTGGTTGGCACCCTTGCTTGCTCGTGGAGTCCGAGGAGAGCTCCAGCAGCCCCGGGACACTTGCCGCCTCCCCCGCAGGCTGCATCCTGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000047970.14
ENSMUST00000095261.10
ENSMUST00000167360.8
ENSMUST00000171584.2
CDS GCA 90 bp AAGGCAGGATGCAGCCTGCGGGGGAGGCGGCAAGTGTCCCGGGGCTaGTGGAGCTCTCCTCGGACTCCACGAGCAAGCAAGGGTGCCAAC +
Preference number: 5 (lower is better)
Translates to: KAGCSLRGRRQVSRG*WSSPRTPRASKGAN
Trigger: GTTGGCACCCTTGCTTGCTCGTGGAGTCCGAGGAGAGCTCCAGCAGCCCCGGGACACTTGCCGCCTCCCCCGCAGGCTGCATCCTGCCTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000047970.14
ENSMUST00000095261.10
ENSMUST00000167360.8
ENSMUST00000171584.2
CDS GCA 90 bp GAAAGCACGAGGCCCACCAGCCCTGGGTTGGCAAGGCCCTGCTGGTaGTGCACCAGGGCAATGCCCGCAATGGCGCTGACCACTGCTGCC +
Preference number: 5 (lower is better)
Translates to: ESTRPTSPGLARPCW*CTRAMPAMALTTAA
Trigger: GGCAGCAGTGGTCAGCGCCATTGCGGGCATTGCCCTGGTGCAGCACCAGCAGGGCCTTGCCAACCCAGGGCTGGTGGGCCTCGTGCTTTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000047970.14
ENSMUST00000095261.10
ENSMUST00000167360.8
CDS TCA 90 bp GGCCTGCCAGGGTGTCAGCCAGATGGGAGTAGAGCGGAGACCAGGTaGGGCTGCCCAGGCGCCGTAGCTCCCGGAAGGAAGCCCTGTAGT +
Preference number: 5 (lower is better)
Translates to: GLPGCQPDGSRAETR*GCPGAVAPGRKPCS
Trigger: ACTACAGGGCTTCCTTCCGGGAGCTACGGCGCCTGGGCAGCCTCACCTGGTCTCCGCTCTACTCCCATCTGGCTGACACCCTGGCAGGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000047970.14
ENSMUST00000095261.10
ENSMUST00000167360.8
CDS GCA 90 bp GGACCTCCCCGGTGGGAGGGCGGCTGGGCCCAAGCTTCAGGGCTTTaGGGTAGAGGGTGCTCAGCACAGCCACTCGTGCCTGAAGTGTCA +
Preference number: 5 (lower is better)
Translates to: GPPRWEGGWAQASGL*GRGCSAQPLVPEVS
Trigger: TGACACTTCAGGCACGAGTGGCTGTGCTGAGCACCCTCTACCGCAAAGCCCTGAAGCTTGGGCCCAGCCGCCCTCCCACCGGGGAGGTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000047970.14
ENSMUST00000095261.10
ENSMUST00000167360.8
ENSMUST00000171584.2
CDS GCA 90 bp GGCCCTGTACAGGGCCCTCCACAGTTGGGCCCCCTCCTTCCAATGTaGTTGGAAAACTCGGGCCAGGAAGGCAGGATGCAGCCTGCGGGG +
Preference number: 5 (lower is better)
Translates to: GPVQGPPQLGPLLPM*LENSGQEGRMQPAG
Trigger: CCCCGCAGGCTGCATCCTGCCTTCCTGGCCCGAGTTTTCCAAGCACATTGGAAGGAGGGGGCCCAACTGTGGAGGGCCCTGTACAGGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000047970.14
ENSMUST00000095261.10
ENSMUST00000167360.8
ENSMUST00000171584.2
CDS CCA 90 bp GAGGCGCCAGCCAGGATTGAGAGCTGGGGAGTGATTGGTAGTCCTTaGGGTGCCCAAGTGGCAGGCACTGAGGACGGCGAGGAGCGCGTG +
Preference number: 5 (lower is better)
Translates to: EAPARIESWGVIGSP*GAQVAGTEDGEERV
Trigger: CACGCGCTCCTCGCCGTCCTCAGTGCCTGCCACTTGGGCACCCCAAGGACTACCAATCACTCCCCAGCTCTCAATCCTGGCTGGCGCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
ENSMUST00000171584.2
CDS CCA 90 bp AGTCGGTGCCTAGTAGGTTCAGGACCTCCCCGGTGGGAGGGCGGCTaGGCCCAAGCTTCAGGGCTTTGCGGTAGAGGGTGCTCAGCACAG +
Preference number: 5 (lower is better)
Translates to: SRCLVGSGPPRWEGG*AQASGLCGRGCSAQ
Trigger: CTGTGCTGAGCACCCTCTACCGCAAAGCCCTGAAGCTTGGGCCCAGCCGCCCTCCCACCGGGGAGGTCCTGAACCTACTAGGCACCGACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000047970.14
ENSMUST00000095261.10
ENSMUST00000167360.8
ENSMUST00000171584.2
CDS-3UTR CAA 90 bp GGTAGAAGCACAGAGGAAAACATAGACCAGCAGCCCTGGCGGGTGGGCGGGAAGCCCACCAGCCCTGGGTaGGCAAGGCCCTGCTGGTGC +
Preference number: 5 (lower is better)
Translates to: GRSTEENIDQQPWRVGGKPTSPG*ARPCWC
Trigger: GCACCAGCAGGGCCTTGCCAACCCAGGGCTGGTGGG...CTTCCCGCCCACCCGCCAGGGCTGCTGGTCTATGTTTTCCTCTGTGCTTCTACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS CCA 90 bp AGCCAGCTGATGCGCTGCTGGTGGGGTGACTGCAGTGGCTGGCTGTaGGGCTCCTGGGGAACGTCACAGGAATACTCCTCCAGTCGCTCG +
Preference number: 5 (lower is better)
Translates to: SQLMRCWWGDCSGWL*GSWGTSQEYSSSRS
Trigger: CGAGCGACTGGAGGAGTATTCCTGTGACGTTCCCCAGGAGCCCCACAGCCAGCCACTGCAGTCACCCCACCAGCAGCGCATCAGCTGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000047970.14
ENSMUST00000095261.10
ENSMUST00000167360.8
CDS CCA 90 bp CCTGGCCGGTACACCAGCACCACGTCCTGGAATTCCACACTTCCCTaGGTCAGCCAGCTGATGCGCTGCTGGTGGGGTGACTGCAGTGGC +
Preference number: 5 (lower is better)
Translates to: PGRYTSTTSWNSTLP*VSQLMRCWWGDCSG
Trigger: GCCACTGCAGTCACCCCACCAGCAGCGCATCAGCTGGCTGACCCAGGGAAGTGTGGAATTCCAGGACGTGGTGCTGGTGTACCGGCCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000047970.14
ENSMUST00000095261.10
ENSMUST00000167360.8
CDS-3UTR CAA 90 bp CCAGGAGTGGTTTTCATGAGGAAGCCAGGGTGCTGTGTCCCCTCTGAGCACGTGAGGGAGTGCGGCTGGTaGCGCAGGGCTGAGGGGGAG +
Preference number: 5 (lower is better)
Translates to: PGVVFMRKPGCCVPSEHVRECGW*RRAEGE
Trigger: CTCCCCCTCAGCCCTGCGCAACCAGCCGCACTCCCT...CACGTGCTCAGAGGGGACACAGCACCCTGGCTTCCTCATGAAAACCACTCCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS TCA 90 bp GCTGCAGAGGCAGGCCCCAGGCCTCATGGAAGCTGCCAGCAAAGTTaGGCAGCCTCTCGGAGTCGGTGCCTAGTAGGTTCAGGACCTCCC +
Preference number: 5 (lower is better)
Translates to: AAEAGPRPHGSCQQS*AASRSRCLVGSGPP
Trigger: GGGAGGTCCTGAACCTACTAGGCACCGACTCCGAGAGGCTGCTCAACTTTGCTGGCAGCTTCCATGAGGCCTGGGGCCTGCCTCTGCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000047970.14
ENSMUST00000095261.10
ENSMUST00000167360.8
ENSMUST00000171584.2
CDS GCA 90 bp TGGTCCCCCAGGGGCTGCCCAGCCCAACCCATAGGCCAAGACTGCTaGCAGTTGCAGAATGAGAAGACACACACGGCCCAGAGGTCCTGG +
Preference number: 5 (lower is better)
Translates to: WSPRGCPAQPIGQDC*QLQNEKTHTAQRSW
Trigger: CCAGGACCTCTGGGCCGTGTGTGTCTTCTCATTCTGCAACTGGCAGCAGTCTTGGCCTATGGGTTGGGCTGGGCAGCCCCTGGGGGACCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000047970.14
ENSMUST00000095261.10
ENSMUST00000167360.8
ENSMUST00000171584.2
CDS GCA 90 bp CTGGTGCTGCACCAGGGCAATGCCCGCAATGGCGCTGACCACTGCTaGCCCCATGAGCTGCAGTCGAATGTCCAACCACTGCATCGTGGC +
Preference number: 5 (lower is better)
Translates to: LVLHQGNARNGADHC*PHELQSNVQPLHRG
Trigger: GCCACGATGCAGTGGTTGGACATTCGACTGCAGCTCATGGGGGCAGCAGTGGTCAGCGCCATTGCGGGCATTGCCCTGGTGCAGCACCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000047970.14
ENSMUST00000095261.10
ENSMUST00000167360.8
CDS GCA 90 bp TTGTGGTCCCCCAGGGGCTGCCCAGCCCAACCCATAGGCCAAGACTaGTGCCAGTTGCAGAATGAGAAGACACACACGGCCCAGAGGTCC +
Preference number: 5 (lower is better)
Translates to: LWSPRGCPAQPIGQD*CQLQNEKTHTAQRS
Trigger: GGACCTCTGGGCCGTGTGTGTCTTCTCATTCTGCAACTGGCAGCAGTCTTGGCCTATGGGTTGGGCTGGGCAGCCCCTGGGGGACCACAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000047970.14
ENSMUST00000095261.10
ENSMUST00000167360.8
ENSMUST00000171584.2
CDS GCA 90 bp CTCCAAGAGTCGCTGGTTCTCCTCTTCAAACCTGTAAGTGGCCCCTaGAGCCCGGAGCACAGGGAGGCCTGCCAGGGTGTCAGCCAGATG +
Preference number: 5 (lower is better)
Translates to: LQESLVLLFKPVSGP*SPEHREACQGVSQM
Trigger: CATCTGGCTGACACCCTGGCAGGCCTCCCTGTGCTCCGGGCTGCAGGGGCCACTTACAGGTTTGAAGAGGAGAACCAGCGACTCTTGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000047970.14
ENSMUST00000095261.10
ENSMUST00000167360.8
CDS GCA 90 bp CTGCTGGTGCTGCACCAGGGCAATGCCCGCAATGGCGCTGACCACTaGTGCCCCCATGAGCTGCAGTCGAATGTCCAACCACTGCATCGT +
Preference number: 5 (lower is better)
Translates to: LLVLHQGNARNGADH*CPHELQSNVQPLHR
Trigger: ACGATGCAGTGGTTGGACATTCGACTGCAGCTCATGGGGGCAGCAGTGGTCAGCGCCATTGCGGGCATTGCCCTGGTGCAGCACCAGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000047970.14
ENSMUST00000095261.10
ENSMUST00000167360.8
CDS CCA 90 bp GAGGAAGGATGCTGCGAGTCGGAGGCGCCAGCCAGGATTGAGAGCTaGGGAGTGATTGGTAGTCCTTGGGGTGCCCAAGTGGCAGGCACT +
Preference number: 5 (lower is better)
Translates to: EEGCCESEAPARIES*GVIGSPWGAQVAGT
Trigger: AGTGCCTGCCACTTGGGCACCCCAAGGACTACCAATCACTCCCCAGCTCTCAATCCTGGCTGGCGCCTCCGACTCGCAGCATCCTTCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
ENSMUST00000171584.2
CDS CCA 90 bp GGTTCAGCTCCAAGAGTCGCTGGTTCTCCTCTTCAAACCTGTAAGTaGCCCCTGCAGCCCGGAGCACAGGGAGGCCTGCCAGGGTGTCAG +
Preference number: 5 (lower is better)
Translates to: GSAPRVAGSPLQTCK*PLQPGAQGGLPGCQ
Trigger: CTGACACCCTGGCAGGCCTCCCTGTGCTCCGGGCTGCAGGGGCCACTTACAGGTTTGAAGAGGAGAACCAGCGACTCTTGGAGCTGAACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000047970.14
ENSMUST00000095261.10
ENSMUST00000167360.8
CDS CCA 90 bp TCTAGGGCATTTGGCAGCCCTGGCCGGTACACCAGCACCACGTCCTaGAATTCCACACTTCCCTGGGTCAGCCAGCTGATGCGCTGCTGG +
Preference number: 5 (lower is better)
Translates to: SRAFGSPGRYTSTTS*NSTLPWVSQLMRCW
Trigger: CCAGCAGCGCATCAGCTGGCTGACCCAGGGAAGTGTGGAATTCCAGGACGTGGTGCTGGTGTACCGGCCAGGGCTGCCAAATGCCCTAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000047970.14
ENSMUST00000095261.10
ENSMUST00000167360.8
CDS CCA 90 bp CACTGTTCCAAGGCTTGCCACAGGGCCCTGTCCTCGTGTAGGCCCTaGGGGTCCAGGTTCTCCCGAATAGTCCCGCTGAACAGGAAAGGC +
Preference number: 5 (lower is better)
Translates to: HCSKACHRALSSCRP*GSRFSRIVPLNRKG
Trigger: GCCTTTCCTGTTCAGCGGGACTATTCGGGAGAACCTGGACCCCCAGGGCCTACACGAGGACAGGGCCCTGTGGCAAGCCTTGGAACAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000047970.14
ENSMUST00000095261.10
ENSMUST00000167360.8
CDS-3UTR CAA 90 bp GGTAGAAGCACAGAGGAAAACATAGACCAGCAGCCCTGGCGGGTGGGCGGGAAGGTACCAGGGCCGGGGTaGGTAGAAAGGCTGCCAGAG +
Preference number: 5 (lower is better)
Translates to: GRSTEENIDQQPWRVGGKVPGPG*VERLPE
Trigger: CTCTGGCAGCCTTTCTACCAACCCCGGCCCTGGTAC...CTTCCCGCCCACCCGCCAGGGCTGCTGGTCTATGTTTTCCTCTGTGCTTCTACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
ENSMUST00000171584.2
CDS-3UTR CAA 90 bp GGTAGAAGCACAGAGGAAAACATAGACCAGCAGCCCTGGCGGGTGGGCGGGAAGAGAAACAGGGAAGACTaGCCGGAGCCTGTGCGGCCC +
Preference number: 5 (lower is better)
Translates to: GRSTEENIDQQPWRVGGKRNRED*PEPVRP
Trigger: GGGCCGCACAGGCTCCGGCAAGTCTTCCCTGTTTCT...CTTCCCGCCCACCCGCCAGGGCTGCTGGTCTATGTTTTCCTCTGTGCTTCTACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS-3UTR CAA 90 bp GGAGTGGTTTTCATGAGGAAGCCAGGGTGCTGTGTCCCCTCTGAGCACGTGAGACACCACCCTCCCGGCTaGGAGCACCAGCACACGGTC +
Preference number: 5 (lower is better)
Translates to: GVVFMRKPGCCVPSEHVRHHPPG*EHQHTV
Trigger: GACCGTGTGCTGGTGCTCCAAGCCGGGAGGGTGGTG...TCTCACGTGCTCAGAGGGGACACAGCACCCTGGCTTCCTCATGAAAACCACTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS TCA 90 bp CTGCCCAGCCCAACCCATAGGCCAAGACTGCTGCCAGTTGCAGAATaGGAAGACACACACGGCCCAGAGGTCCTGGGAGAAGTGGGGGCA +
Preference number: 5 (lower is better)
Translates to: LPSPTHRPRLLPVAE*EDTHGPEVLGEVGA
Trigger: TGCCCCCACTTCTCCCAGGACCTCTGGGCCGTGTGTGTCTTCTCATTCTGCAACTGGCAGCAGTCTTGGCCTATGGGTTGGGCTGGGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000047970.14
ENSMUST00000095261.10
ENSMUST00000167360.8
ENSMUST00000171584.2
CDS TCA 90 bp ACTCCTCCAGTCGCTCGACGCTCACCATCATGGCTTCCGTCTGTGTaGAACTGCTCACCAGACCCGAGAGCAGGCCCGTCAGAGACAGGG +
Preference number: 5 (lower is better)
Translates to: TPPVARRSPSWLPSV*NCSPDPRAGPSETG
Trigger: CCCTGTCTCTGACGGGCCTGCTCTCGGGTCTGGTGAGCAGTTTCACACAGACGGAAGCCATGATGGTGAGCGTCGAGCGACTGGAGGAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000047970.14
ENSMUST00000095261.10
ENSMUST00000167360.8
CDS GCA 90 bp CAGGAAGGGATCATGAGTCCAGGGCTCTTGTGGTCCCCCAGGGGCTaGCCAGCCCAACCCATAGGCCAAGACTGCTGCCAGTTGCAGAAT +
Preference number: 5 (lower is better)
Translates to: QEGIMSPGLLWSPRG*PAQPIGQDCCQLQN
Trigger: ATTCTGCAACTGGCAGCAGTCTTGGCCTATGGGTTGGGCTGGGCAGCCCCTGGGGGACCACAAGAGCCCTGGACTCATGATCCCTTCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000047970.14
ENSMUST00000095261.10
ENSMUST00000167360.8
ENSMUST00000171584.2
CDS CCA 90 bp CGGCCCAGAGGTCCTGGGAGAAGTGGGGGCAGAAATGTACCTCGCTaGCAATGCCACAGCAGAGTTAGTACCAGGGCCGGGGTTGGTAGA +
Preference number: 5 (lower is better)
Translates to: RPRGPGRSGGRNVPR*QCHSRVSTRAGVGR
Trigger: TCTACCAACCCCGGCCCTGGTACTAACTCTGCTGTGGCATTGCCAGCGAGGTACATTTCTGCCCCCACTTCTCCCAGGACCTCTGGGCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000047970.14
ENSMUST00000095261.10
ENSMUST00000167360.8
ENSMUST00000171584.2
CDS CCA 90 bp TTGACTCTCAGAGGACAGGAAGGGATCATGAGTCCAGGGCTCTTGTaGTCCCCCAGGGGCTGCCCAGCCCAACCCATAGGCCAAGACTGC +
Preference number: 5 (lower is better)
Translates to: LTLRGQEGIMSPGLL*SPRGCPAQPIGQDC
Trigger: GCAGTCTTGGCCTATGGGTTGGGCTGGGCAGCCCCTGGGGGACCACAAGAGCCCTGGACTCATGATCCCTTCCTGTCCTCTGAGAGTCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000047970.14
ENSMUST00000095261.10
ENSMUST00000167360.8
ENSMUST00000171584.2
CDS CCA 90 bp AGCCCACCAGGAGGGAGAGCAGCAGAGGCCCGGAGAATCCCAGCATaGTCCCCACCATCTTCAACAGTCCAAGGGCCAGGTAGCAACATC +
Preference number: 5 (lower is better)
Translates to: SPPGGRAAEARRIPA*SPPSSTVQGPGSNI
Trigger: GATGTTGCTACCTGGCCCTTGGACTGTTGAAGATGGTGGGGACCATGCTGGGATTCTCCGGGCCTCTGCTGCTCTCCCTCCTGGTGGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000047970.14
ENSMUST00000095261.10
ENSMUST00000167360.8
ENSMUST00000171584.2
CDS CCA 90 bp ACAGGTTCTGGCCCCTTTCTCCCAGCTCTCCATCCAGGCCACCCATaGCGACAGCCACCTCACTCAGGTGACACTGTTCCAAGGCTTGCC +
Preference number: 5 (lower is better)
Translates to: TGSGPFLPALHPGHP*RQPPHSGDTVPRLA
Trigger: GGCAAGCCTTGGAACAGTGTCACCTGAGTGAGGTGGCTGTCGCCATGGGTGGCCTGGATGGAGAGCTGGGAGAAAGGGGCCAGAACCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095261.10
ENSMUST00000167360.8
CDS-3UTR CAA 90 bp CGGGTGGTGTGGCTCAGCACTCCCAGGATGCACCTGTGTAACAGGTGGTTGGCCCGTAGCATCTCCTGGTaGCTGGCCATGATTCGGGTG +
Preference number: 5 (lower is better)
Translates to: RVVWLSTPRMHLCNRWLARSISW*LAMIRV
Trigger: CACCCGAATCATGGCCAGCAACCAGGAGATGCTACG...GGCCAACCACCTGTTACACAGGTGCATCCTGGGAGTGCTGAGCCACACCACCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000171584.2
CDS-3UTR CAA 90 bp CCAGGAGTGGTTTTCATGAGGAAGCCAGGGTGCTGTGTCCCCTCTGAGCACGTGACGGCGCCCTCGCTTTaGCTTTCCTCCTGCACGAGG +
Preference number: 5 (lower is better)
Translates to: PGVVFMRKPGCCVPSEHVTAPSL*LSSCTR
Trigger: CCTCGTGCAGGAGGAAAGCAAAAGCGAGGGCGCCGT...CACGTGCTCAGAGGGGACACAGCACCCTGGCTTCCTCATGAAAACCACTCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS-3UTR CAA 90 bp GTTTTCATGAGGAAGCCAGGGTGCTGTGTCCCCTCTGAGCACGTGAGAAGAGGTAGCACTCGCCCTGCGTaGGGCTCCAGCAGCCGGAAG +
Preference number: 5 (lower is better)
Translates to: VFMRKPGCCVPSEHVRRGSTRPA*GSSSRK
Trigger: CTTCCGGCTGCTGGAGCCCAACGCAGGGCGAGTGCT...ACCTCTTCTCACGTGCTCAGAGGGGACACAGCACCCTGGCTTCCTCATGAAAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS TCA 90 bp AGACCCGGCCGGAAGGTGTGGAGTCATAGAAAGTCACCGGTGCCATaGGGAGTCGATGCAGTAGGCGGTGGTGTAGGCTGGCAGCTGCTT +
Preference number: 5 (lower is better)
Translates to: RPGRKVWSHRKSPVP*GVDAVGGGVGWQLL
Trigger: AAGCAGCTGCCAGCCTACACCACCGCCTACTGCATCGACTCCTCATGGCACCGGTGACTTTCTATGACTCCACACCTTCCGGCCGGGTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000047970.14
ENSMUST00000095261.10
ENSMUST00000167360.8
CDS GCA 90 bp GTCGAGGAGATAGAGTGCTTTCTCCTGGTAGACAGCACGGGCAAGTaGAATCCGGGCCCTCTGTCCCCCGCTGAGGGTCACACCTTTCTC +
Preference number: 5 (lower is better)
Translates to: VEEIECFLLVDSTGK*NPGPLSPAEGHTFL
Trigger: GAGAAAGGTGTGACCCTCAGCGGGGGACAGAGGGCCCGGATTGCACTTGCCCGTGCTGTCTACCAGGAGAAAGCACTCTATCTCCTCGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000047970.14
ENSMUST00000095261.10
ENSMUST00000167360.8
ENSMUST00000168490.2
CDS GCA 90 bp GCCGAAGGACCCCAGAAGCCCCTCACCTTAACCCGTGCATCCTTGTaGCGTAGCATCTCCTGGTTGCTGGCCATGATTCGGGTGGCAATC +
Preference number: 5 (lower is better)
Translates to: AEGPQKPLTLTRASL*RSISWLLAMIRVAI
Trigger: GATTGCCACCCGAATCATGGCCAGCAACCAGGAGATGCTACGGCACAAGGATGCACGGGTTAAGGTGAGGGGCTTCTGGGGTCCTTCGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000171584.2
CDS-3UTR CAA 90 bp GGTAGAAGCACAGAGGAAAACATAGACCAGCAGCCCTGGCGGGTGGGCGGGAAGCGTAGCATCTCCTGGTaGCTGGCCATGATTCGGGTG +
Preference number: 5 (lower is better)
Translates to: GRSTEENIDQQPWRVGGKRSISW*LAMIRV
Trigger: CACCCGAATCATGGCCAGCAACCAGGAGATGCTACG...CTTCCCGCCCACCCGCCAGGGCTGCTGGTCTATGTTTTCCTCTGTGCTTCTACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
ENSMUST00000171584.2
CDS-3UTR CAA 90 bp GGTAGAAGCACAGAGGAAAACATAGACCAGCAGCCCTGGCGGGTGGGCGGGAAGTCTGGCTTGCTCCAATaGGGTCCCAGGAGAACAGGG +
Preference number: 5 (lower is better)
Translates to: GRSTEENIDQQPWRVGGKSGLLQ*GPRRTG
Trigger: CCCTGTTCTCCTGGGACCCAATTGGAGCAAGCCAGA...CTTCCCGCCCACCCGCCAGGGCTGCTGGTCTATGTTTTCCTCTGTGCTTCTACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS-3UTR CAA 90 bp CCAGGAGTGGTTTTCATGAGGAAGCCAGGGTGCTGTGTCCCCTCTGAGCACGTGCCATTGGAAGCAGCCTaGTGCAGTGGGGTGCTGAGC +
Preference number: 5 (lower is better)
Translates to: PGVVFMRKPGCCVPSEHVPLEAA*CSGVLS
Trigger: GCTCAGCACCCCACTGCACAAGGCTGCTTCCAATGG...CACGTGCTCAGAGGGGACACAGCACCCTGGCTTCCTCATGAAAACCACTCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS-3UTR CAA 90 bp GTCCCCTCTGAGCACGTGAGAAGAGGTAGAAGCACAGAGGAAAACATAGACCAGAGGGAGTGCGGCTGGTaGCGCAGGGCTGAGGGGGAG +
Preference number: 5 (lower is better)
Translates to: VPSEHVRRGRSTEENIDQRECGW*RRAEGE
Trigger: CTCCCCCTCAGCCCTGCGCAACCAGCCGCACTCCCT...CTGGTCTATGTTTTCCTCTGTGCTTCTACCTCTTCTCACGTGCTCAGAGGGGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS GCA 90 bp GCATTGCCAGTGGCCATTCTTTGCTTCTCGCTGGCTCCTCTGACATaGCTGGGACTCACCCATGGCGACAGCCACCTCACTCAGGTGACA +
Preference number: 5 (lower is better)
Translates to: ALPVAILCFSLAPLT*LGLTHGDSHLTQVT
Trigger: TGTCACCTGAGTGAGGTGGCTGTCGCCATGGGTGAGTCCCAGGCATGTCAGAGGAGCCAGCGAGAAGCAAAGAATGGCCACTGGCAATGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000047970.14
CDS GCA 90 bp CAGGCCACCTGTAAGCAGAGCACTGCATTGCCAGTGGCCATTCTTTaGTTCTCGCTGGCTCCTCTGACATGCCTGGGACTCACCCATGGC +
Preference number: 5 (lower is better)
Translates to: QATCKQSTALPVAIL*FSLAPLTCLGLTHG
Trigger: GCCATGGGTGAGTCCCAGGCATGTCAGAGGAGCCAGCGAGAAGCAAAGAATGGCCACTGGCAATGCAGTGCTCTGCTTACAGGTGGCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000047970.14
CDS CCA 90 bp TCTTTGCTTCTCGCTGGCTCCTCTGACATGCCTGGGACTCACCCATaGCGACAGCCACCTCACTCAGGTGACACTGTTCCAAGGCTTGCC +
Preference number: 5 (lower is better)
Translates to: SLLLAGSSDMPGTHP*RQPPHSGDTVPRLA
Trigger: GGCAAGCCTTGGAACAGTGTCACCTGAGTGAGGTGGCTGTCGCCATGGGTGAGTCCCAGGCATGTCAGAGGAGCCAGCGAGAAGCAAAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000047970.14
CDS-3UTR CAA 90 bp CTGTGGAAGGGAAACCGGCCCCGAATTCTGAGTAAAAAGGCCCATGTGGGTTGGGTACCAGGGCCGGGGTaGGTAGAAAGGCTGCCAGAG +
Preference number: 5 (lower is better)
Translates to: LWKGNRPRILSKKAHVGWVPGPG*VERLPE
Trigger: CTCTGGCAGCCTTTCTACCAACCCCGGCCCTGGTAC...CCAACCCACATGGGCCTTTTTACTCAGAATTCGGGGCCGGTTTCCCTTCCACAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
ENSMUST00000171584.2
CDS-3UTR CAA 90 bp CCAGGAGTGGTTTTCATGAGGAAGCCAGGGTGCTGTGTCCCCTCTGAGCACGTGAAGCTGCCAGCAAAGTaGAGCAGCCTCTCGGAGTCG +
Preference number: 5 (lower is better)
Translates to: PGVVFMRKPGCCVPSEHVKLPAK*SSLSES
Trigger: CGACTCCGAGAGGCTGCTCAACTTTGCTGGCAGCTT...CACGTGCTCAGAGGGGACACAGCACCCTGGCTTCCTCATGAAAACCACTCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
ENSMUST00000171584.2
CDS-3UTR CAA 90 bp GGAGTGGTTTTCATGAGGAAGCCAGGGTGCTGTGTCCCCTCTGAGCACGTGAGATGGCTGGTGTCCACATaGTCCAGGAGCACTCGCCCT +
Preference number: 5 (lower is better)
Translates to: GVVFMRKPGCCVPSEHVRWLVST*SRSTRP
Trigger: AGGGCGAGTGCTCCTGGACAATGTGGACACCAGCCA...TCTCACGTGCTCAGAGGGGACACAGCACCCTGGCTTCCTCATGAAAACCACTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS-3UTR CAA 90 bp GGTAGAAGCACAGAGGAAAACATAGACCAGCAGCCCTGGCGGGTGGGCGGGAAGTCTTCTGGTCCACACTaGCTGTGGCCTCGTCAATGC +
Preference number: 5 (lower is better)
Translates to: GRSTEENIDQQPWRVGGKSSGPH*LWPRQC
Trigger: GCATTGACGAGGCCACAGCAAGTGTGGACCAGAAGA...CTTCCCGCCCACCCGCCAGGGCTGCTGGTCTATGTTTTCCTCTGTGCTTCTACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS-3UTR CAA 90 bp GTCCCCTCTGAGCACGTGAGAAGAGGTAGAAGCACAGAGGAAAACATAGACCAGCACCACCCTCCCGGCTaGGAGCACCAGCACACGGTC +
Preference number: 5 (lower is better)
Translates to: VPSEHVRRGRSTEENIDQHHPPG*EHQHTV
Trigger: GACCGTGTGCTGGTGCTCCAAGCCGGGAGGGTGGTG...CTGGTCTATGTTTTCCTCTGTGCTTCTACCTCTTCTCACGTGCTCAGAGGGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS GCA 90 bp AGAGGTCCTGGGAGAAGTGGGGGCAGAAATGTACCTCGCTGGCAATaGCACAGCAGAGTTAGTACCAGGGCCGGGGTTGGTAGAAAGGCT +
Preference number: 5 (lower is better)
Translates to: RGPGRSGGRNVPRWQ*HSRVSTRAGVGRKA
Trigger: AGCCTTTCTACCAACCCCGGCCCTGGTACTAACTCTGCTGTGGCATTGCCAGCGAGGTACATTTCTGCCCCCACTTCTCCCAGGACCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000047970.14
ENSMUST00000095261.10
ENSMUST00000167360.8
ENSMUST00000171584.2
CDS GCA 90 bp CACCCCTGCAATGGTTGCATACACGATGAGGTAGAAGTGGACGTCTaGGGTGCCATTGGAAGCAGCCTTGTGCAGTGGGGTGCTGAGCAG +
Preference number: 5 (lower is better)
Translates to: HPCNGCIHDEVEVDV*GAIGSSLVQWGAEQ
Trigger: CTGCTCAGCACCCCACTGCACAAGGCTGCTTCCAATGGCACCGCAGACGTCCACTTCTACCTCATCGTGTATGCAACCATTGCAGGGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000047970.14
ENSMUST00000095261.10
ENSMUST00000167360.8
CDS GCA 90 bp CACAGCCCGGAGAAGGGTGCAGAGGGAGTTCACCCCTGCAATGGTTaGATACACGATGAGGTAGAAGTGGACGTCTGCGGTGCCATTGGA +
Preference number: 5 (lower is better)
Translates to: HSPEKGAEGVHPCNG*IHDEVEVDVCGAIG
Trigger: TCCAATGGCACCGCAGACGTCCACTTCTACCTCATCGTGTATGCAACCATTGCAGGGGTGAACTCCCTCTGCACCCTTCTCCGGGCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000047970.14
ENSMUST00000095261.10
ENSMUST00000167360.8
CDS CCA 90 bp TGCTGCCAGTTGCAGAATGAGAAGACACACACGGCCCAGAGGTCCTaGGAGAAGTGGGGGCAGAAATGTACCTCGCTGGCAATGCCACAG +
Preference number: 5 (lower is better)
Translates to: CCQLQNEKTHTAQRS*EKWGQKCTSLAMPQ
Trigger: CTGTGGCATTGCCAGCGAGGTACATTTCTGCCCCCACTTCTCCCAGGACCTCTGGGCCGTGTGTGTCTTCTCATTCTGCAACTGGCAGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000047970.14
ENSMUST00000095261.10
ENSMUST00000167360.8
ENSMUST00000171584.2
CDS-3UTR CAA 90 bp GGTAGAAGCACAGAGGAAAACATAGACCAGCAGCCCTGGCGGGTGGGCGGGAAGGTGGCAATCACTTTGTaGACAGGTACCAGCAGCAGC +
Preference number: 5 (lower is better)
Translates to: GRSTEENIDQQPWRVGGKVAITL*TGTSSS
Trigger: GCTGCTGCTGGTACCTGTCAACAAAGTGATTGCCAC...CTTCCCGCCCACCCGCCAGGGCTGCTGGTCTATGTTTTCCTCTGTGCTTCTACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
ENSMUST00000171584.2
CDS-3UTR CAA 90 bp CTGTGGAAGGGAAACCGGCCCCGAATTCTGAGTAAAAAGGCCCATGTGGGTTGGACCGTTGCGCGTGGCTaGCATGAGGAGCAGAGAGAC +
Preference number: 5 (lower is better)
Translates to: LWKGNRPRILSKKAHVGWTVARG*HEEQRD
Trigger: GTCTCTCTGCTCCTCATGCAAGCCACGCGCAACGGT...CCAACCCACATGGGCCTTTTTACTCAGAATTCGGGGCCGGTTTCCCTTCCACAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS-3UTR CAA 90 bp CTGTGGAAGGGAAACCGGCCCCGAATTCTGAGTAAAAAGGCCCATGTGGGTTGGCCATTGGAAGCAGCCTaGTGCAGTGGGGTGCTGAGC +
Preference number: 5 (lower is better)
Translates to: LWKGNRPRILSKKAHVGWPLEAA*CSGVLS
Trigger: GCTCAGCACCCCACTGCACAAGGCTGCTTCCAATGG...CCAACCCACATGGGCCTTTTTACTCAGAATTCGGGGCCGGTTTCCCTTCCACAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS-3UTR CAA 90 bp CTGTGGAAGGGAAACCGGCCCCGAATTCTGAGTAAAAAGGCCCATGTGGGTTGGAGCAGGCCCACGGAATaGGCCAGCAGGATGTTGAGG +
Preference number: 5 (lower is better)
Translates to: LWKGNRPRILSKKAHVGWSRPTE*ASRMLR
Trigger: CCTCAACATCCTGCTGGCCAATTCCGTGGGCCTGCT...CCAACCCACATGGGCCTTTTTACTCAGAATTCGGGGCCGGTTTCCCTTCCACAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS-3UTR CAA 90 bp CCAGGAGTGGTTTTCATGAGGAAGCCAGGGTGCTGTGTCCCCTCTGAGCACGTGTCTTCTGGTCCACACTaGCTGTGGCCTCGTCAATGC +
Preference number: 5 (lower is better)
Translates to: PGVVFMRKPGCCVPSEHVSSGPH*LWPRQC
Trigger: GCATTGACGAGGCCACAGCAAGTGTGGACCAGAAGA...CACGTGCTCAGAGGGGACACAGCACCCTGGCTTCCTCATGAAAACCACTCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS GCA 90 bp TGCAAAGAGCACAGCCCGGAGAAGGGTGCAGAGGGAGTTCACCCCTaGAATGGTTGCATACACGATGAGGTAGAAGTGGACGTCTGCGGT +
Preference number: 5 (lower is better)
Translates to: CKEHSPEKGAEGVHP*NGCIHDEVEVDVCG
Trigger: ACCGCAGACGTCCACTTCTACCTCATCGTGTATGCAACCATTGCAGGGGTGAACTCCCTCTGCACCCTTCTCCGGGCTGTGCTCTTTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000047970.14
ENSMUST00000095261.10
ENSMUST00000167360.8
CDS-3UTR CAA 90 bp GAAGATCGAGGAAACGCTGGATCCGGTCCAGGGATACTTTGGATTCCAAGAGACGTACCAGGGCCGGGGTaGGTAGAAAGGCTGCCAGAG +
Preference number: 5 (lower is better)
Translates to: EDRGNAGSGPGILWIPRDVPGPG*VERLPE
Trigger: CTCTGGCAGCCTTTCTACCAACCCCGGCCCTGGTAC...GTCTCTTGGAATCCAAAGTATCCCTGGACCGGATCCAGCGTTTCCTCGATCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000171584.2
CDS-3UTR CAA 90 bp CGGGTGGTGTGGCTCAGCACTCCCAGGATGCACCTGTGTAACAGGTGGTTGGCCAGCTACCTCTGTTTCTaGACTCTCAGAGGACAGGAA +
Preference number: 5 (lower is better)
Translates to: RVVWLSTPRMHLCNRWLASYLCF*TLRGQE
Trigger: TTCCTGTCCTCTGAGAGTCAAGAAACAGAGGTAGCT...GGCCAACCACCTGTTACACAGGTGCATCCTGGGAGTGCTGAGCCACACCACCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000171584.2
CDS-3UTR CAA 90 bp GTTTTCATGAGGAAGCCAGGGTGCTGTGTCCCCTCTGAGCACGTGAGAAGAGGTCGTAGCATCTCCTGGTaGCTGGCCATGATTCGGGTG +
Preference number: 5 (lower is better)
Translates to: VFMRKPGCCVPSEHVRRGRSISW*LAMIRV
Trigger: CACCCGAATCATGGCCAGCAACCAGGAGATGCTACG...ACCTCTTCTCACGTGCTCAGAGGGGACACAGCACCCTGGCTTCCTCATGAAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
ENSMUST00000171584.2
CDS-3UTR CAA 90 bp GTTTTCATGAGGAAGCCAGGGTGCTGTGTCCCCTCTGAGCACGTGAGAAGAGGTAGCGCTGTAAACACCTaGGTGGCAGTGAGCTGGTGC +
Preference number: 5 (lower is better)
Translates to: VFMRKPGCCVPSEHVRRGSAVNT*VAVSWC
Trigger: GCACCAGCTCACTGCCACCAAGGTGTTTACAGCGCT...ACCTCTTCTCACGTGCTCAGAGGGGACACAGCACCCTGGCTTCCTCATGAAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS-3UTR CAA 90 bp CCAGGAGTGGTTTTCATGAGGAAGCCAGGGTGCTGTGTCCCCTCTGAGCACGTGCTGTGTAACAGGTGGTaGGCCACATCTGCATCCACA +
Preference number: 5 (lower is better)
Translates to: PGVVFMRKPGCCVPSEHVLCNRW*ATSAST
Trigger: TGTGGATGCAGATGTGGCCAACCACCTGTTACACAG...CACGTGCTCAGAGGGGACACAGCACCCTGGCTTCCTCATGAAAACCACTCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS-3UTR CAA 90 bp GTCCCCTCTGAGCACGTGAGAAGAGGTAGAAGCACAGAGGAAAACATAGACCAGAGAAACAGGGAAGACTaGCCGGAGCCTGTGCGGCCC +
Preference number: 5 (lower is better)
Translates to: VPSEHVRRGRSTEENIDQRNRED*PEPVRP
Trigger: GGGCCGCACAGGCTCCGGCAAGTCTTCCCTGTTTCT...CTGGTCTATGTTTTCCTCTGTGCTTCTACCTCTTCTCACGTGCTCAGAGGGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS TCA 90 bp GAAGGGTGCAGAGGGAGTTCACCCCTGCAATGGTTGCATACACGATaGGGTAGAAGTGGACGTCTGCGGTGCCATTGGAAGCAGCCTTGT +
Preference number: 5 (lower is better)
Translates to: EGCRGSSPLQWLHTR*GRSGRLRCHWKQPC
Trigger: ACAAGGCTGCTTCCAATGGCACCGCAGACGTCCACTTCTACCTCATCGTGTATGCAACCATTGCAGGGGTGAACTCCCTCTGCACCCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000047970.14
ENSMUST00000095261.10
ENSMUST00000167360.8
CDS TCA 90 bp GATGCTGCGAGTCGGAGGCGCCAGCCAGGATTGAGAGCTGGGGAGTaGTTGGTAGTCCTGGGAAAGAAAGAGAAGAAAAGAAGACCGCAG +
Preference number: 5 (lower is better)
Translates to: DAASRRRQPGLRAGE*LVVLGKKEKKRRPQ
Trigger: CTGCGGTCTTCTTTTCTTCTCTTTCTTTCCCAGGACTACCAATCACTCCCCAGCTCTCAATCCTGGCTGGCGCCTCCGACTCGCAGCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000095261.10
CDS-3UTR CAA 90 bp CCAGGAGTGGTTTTCATGAGGAAGCCAGGGTGCTGTGTCCCCTCTGAGCACGTGCAAGACTGCTGCCAGTaGCAGAATGAGAAGACACAC +
Preference number: 5 (lower is better)
Translates to: PGVVFMRKPGCCVPSEHVQDCCQ*QNEKTH
Trigger: GTGTGTCTTCTCATTCTGCAACTGGCAGCAGTCTTG...CACGTGCTCAGAGGGGACACAGCACCCTGGCTTCCTCATGAAAACCACTCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
ENSMUST00000171584.2
CDS-3UTR CAA 90 bp GGTCTGCTGCTTTGCTGGGCTCCAGTGCCCCAGACCTTTATTTTTGCCTTGAACAAGCTGCCAGCAAAGTaGAGCAGCCTCTCGGAGTCG +
Preference number: 5 (lower is better)
Translates to: GLLLCWAPVPQTFIFALNKLPAK*SSLSES
Trigger: CGACTCCGAGAGGCTGCTCAACTTTGCTGGCAGCTT...GTTCAAGGCAAAAATAAAGGTCTGGGGCACTGGAGCCCAGCAAAGCAGCAGACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000171584.2
CDS-3UTR CAA 90 bp GGAGTGGTTTTCATGAGGAAGCCAGGGTGCTGTGTCCCCTCTGAGCACGTGAGAGTGGCAATCACTTTGTaGACAGGTACCAGCAGCAGC +
Preference number: 5 (lower is better)
Translates to: GVVFMRKPGCCVPSEHVRVAITL*TGTSSS
Trigger: GCTGCTGCTGGTACCTGTCAACAAAGTGATTGCCAC...TCTCACGTGCTCAGAGGGGACACAGCACCCTGGCTTCCTCATGAAAACCACTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
ENSMUST00000171584.2
CDS-3UTR CAA 90 bp GGTAGAAGCACAGAGGAAAACATAGACCAGCAGCCCTGGCGGGTGGGCGGGAAGTCCCACCTGAAGAATTaGATGACTCGAATGCCACTC +
Preference number: 5 (lower is better)
Translates to: GRSTEENIDQQPWRVGGKSHLKN*MTRMPL
Trigger: GAGTGGCATTCGAGTCATCAAATTCTTCAGGTGGGA...CTTCCCGCCCACCCGCCAGGGCTGCTGGTCTATGTTTTCCTCTGTGCTTCTACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS-3UTR CAA 90 bp CCAGGAGTGGTTTTCATGAGGAAGCCAGGGTGCTGTGTCCCCTCTGAGCACGTGCGGTCCAGGGATACTTaGGATTCCAAGAGACCATTG +
Preference number: 5 (lower is better)
Translates to: PGVVFMRKPGCCVPSEHVRSRDT*DSKRPL
Trigger: CAATGGTCTCTTGGAATCCAAAGTATCCCTGGACCG...CACGTGCTCAGAGGGGACACAGCACCCTGGCTTCCTCATGAAAACCACTCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS-3UTR CAA 90 bp CTGTGGAAGGGAAACCGGCCCCGAATTCTGAGTAAAAAGGCCCATGTGGGTTGGCCTCAGGGCTGTAGCTaGGAAGATCGAGGAAACGCT +
Preference number: 5 (lower is better)
Translates to: LWKGNRPRILSKKAHVGWPQGCS*EDRGNA
Trigger: AGCGTTTCCTCGATCTTCCAAGCTACAGCCCTGAGG...CCAACCCACATGGGCCTTTTTACTCAGAATTCGGGGCCGGTTTCCCTTCCACAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS-3UTR CAA 90 bp GGAGTGGTTTTCATGAGGAAGCCAGGGTGCTGTGTCCCCTCTGAGCACGTGAGATTCCCAAAGAGGATGTaGTCTCGGATGGTGGCACAC +
Preference number: 5 (lower is better)
Translates to: GVVFMRKPGCCVPSEHVRFPKRM*SRMVAH
Trigger: GTGTGCCACCATCCGAGACAACATCCTCTTTGGGAA...TCTCACGTGCTCAGAGGGGACACAGCACCCTGGCTTCCTCATGAAAACCACTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS-3UTR CAA 90 bp CCAGGAGTGGTTTTCATGAGGAAGCCAGGGTGCTGTGTCCCCTCTGAGCACGTGATACTTAGATCATCATaGAGGGCGCAGGCCTCCAGA +
Preference number: 5 (lower is better)
Translates to: PGVVFMRKPGCCVPSEHVILRSS*RAQASR
Trigger: TCTGGAGGCCTGCGCCCTCAATGATGATCTAAGTAT...CACGTGCTCAGAGGGGACACAGCACCCTGGCTTCCTCATGAAAACCACTCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS-3UTR CAA 90 bp TGTGTCCCCTCTGAGCACGTGAGAAGAGGTAGAAGCACAGAGGAAAACATAGACACGGCGCCCTCGCTTTaGCTTTCCTCCTGCACGAGG +
Preference number: 5 (lower is better)
Translates to: CVPSEHVRRGRSTEENIDTAPSL*LSSCTR
Trigger: CCTCGTGCAGGAGGAAAGCAAAAGCGAGGGCGCCGT...GTCTATGTTTTCCTCTGTGCTTCTACCTCTTCTCACGTGCTCAGAGGGGACACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS-3UTR CAA 90 bp GTCCCCTCTGAGCACGTGAGAAGAGGTAGAAGCACAGAGGAAAACATAGACCAGAGCAGGCCCACGGAATaGGCCAGCAGGATGTTGAGG +
Preference number: 5 (lower is better)
Translates to: VPSEHVRRGRSTEENIDQSRPTE*ASRMLR
Trigger: CCTCAACATCCTGCTGGCCAATTCCGTGGGCCTGCT...CTGGTCTATGTTTTCCTCTGTGCTTCTACCTCTTCTCACGTGCTCAGAGGGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS-3UTR CAA 90 bp GGTAGAAGCACAGAGGAAAACATAGACCAGCAGCCCTGGCGGGTGGGCGGGAAGGTCAGCACTGTCTTGTaGGCAAAGCGTTTACAGATG +
Preference number: 5 (lower is better)
Translates to: GRSTEENIDQQPWRVGGKVSTVL*AKRLQM
Trigger: CATCTGTAAACGCTTTGCCAACAAGACAGTGCTGAC...CTTCCCGCCCACCCGCCAGGGCTGCTGGTCTATGTTTTCCTCTGTGCTTCTACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS-3UTR CAA 90 bp GGTAGAAGCACAGAGGAAAACATAGACCAGCAGCCCTGGCGGGTGGGCGGGAAGATGGTCAGCACTGTCTaGTTGGCAAAGCGTTTACAG +
Preference number: 5 (lower is better)
Translates to: GRSTEENIDQQPWRVGGKMVSTV*LAKRLQ
Trigger: CTGTAAACGCTTTGCCAACAAGACAGTGCTGACCAT...CTTCCCGCCCACCCGCCAGGGCTGCTGGTCTATGTTTTCCTCTGTGCTTCTACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS-3UTR CAA 90 bp GTTTTCATGAGGAAGCCAGGGTGCTGTGTCCCCTCTGAGCACGTGAGAAGAGGTGAGTTTAGGATCGTGTaGAGCCTGTGGGCGATGGTC +
Preference number: 5 (lower is better)
Translates to: VFMRKPGCCVPSEHVRRGEFRIV*SLWAMV
Trigger: GACCATCGCCCACAGGCTCAACACGATCCTAAACTC...ACCTCTTCTCACGTGCTCAGAGGGGACACAGCACCCTGGCTTCCTCATGAAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS CCA 90 bp AAGCCCCTCACCTTAACCCGTGCATCCTTGTGCCGTAGCATCTCCTaGTTGCTGGCCATGATTCGGGTGGCAATCACTTTGTTGACAGGT +
Preference number: 5 (lower is better)
Translates to: KPLTLTRASLCRSIS*LLAMIRVAITLLTG
Trigger: ACCTGTCAACAAAGTGATTGCCACCCGAATCATGGCCAGCAACCAGGAGATGCTACGGCACAAGGATGCACGGGTTAAGGTGAGGGGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000171584.2
CDS-3UTR CAA 90 bp CCAGGAGTGGTTTTCATGAGGAAGCCAGGGTGCTGTGTCCCCTCTGAGCACGTGAGCTACCTCTGTTTCTaGACTCTCAGAGGACAGGAA +
Preference number: 5 (lower is better)
Translates to: PGVVFMRKPGCCVPSEHVSYLCF*TLRGQE
Trigger: TTCCTGTCCTCTGAGAGTCAAGAAACAGAGGTAGCT...CACGTGCTCAGAGGGGACACAGCACCCTGGCTTCCTCATGAAAACCACTCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
ENSMUST00000171584.2
CDS-3UTR CAA 90 bp GTCCCCTCTGAGCACGTGAGAAGAGGTAGAAGCACAGAGGAAAACATAGACCAGAAGCTGCCAGCAAAGTaGAGCAGCCTCTCGGAGTCG +
Preference number: 5 (lower is better)
Translates to: VPSEHVRRGRSTEENIDQKLPAK*SSLSES
Trigger: CGACTCCGAGAGGCTGCTCAACTTTGCTGGCAGCTT...CTGGTCTATGTTTTCCTCTGTGCTTCTACCTCTTCTCACGTGCTCAGAGGGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
ENSMUST00000171584.2
CDS-3UTR CAA 90 bp GTCCCCTCTGAGCACGTGAGAAGAGGTAGAAGCACAGAGGAAAACATAGACCAGAGCGCTGTAAACACCTaGGTGGCAGTGAGCTGGTGC +
Preference number: 5 (lower is better)
Translates to: VPSEHVRRGRSTEENIDQSAVNT*VAVSWC
Trigger: GCACCAGCTCACTGCCACCAAGGTGTTTACAGCGCT...CTGGTCTATGTTTTCCTCTGTGCTTCTACCTCTTCTCACGTGCTCAGAGGGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS-3UTR CAA 90 bp GTCCCCTCTGAGCACGTGAGAAGAGGTAGAAGCACAGAGGAAAACATAGACCAGTCTGGCTTGCTCCAATaGGGTCCCAGGAGAACAGGG +
Preference number: 5 (lower is better)
Translates to: VPSEHVRRGRSTEENIDQSGLLQ*GPRRTG
Trigger: CCCTGTTCTCCTGGGACCCAATTGGAGCAAGCCAGA...CTGGTCTATGTTTTCCTCTGTGCTTCTACCTCTTCTCACGTGCTCAGAGGGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS-3UTR CAA 90 bp GTTTTCATGAGGAAGCCAGGGTGCTGTGTCCCCTCTGAGCACGTGAGAAGAGGTTTCCCAAAGAGGATGTaGTCTCGGATGGTGGCACAC +
Preference number: 5 (lower is better)
Translates to: VFMRKPGCCVPSEHVRRGFPKRM*SRMVAH
Trigger: GTGTGCCACCATCCGAGACAACATCCTCTTTGGGAA...ACCTCTTCTCACGTGCTCAGAGGGGACACAGCACCCTGGCTTCCTCATGAAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS-3UTR CAA 90 bp GTTTTCATGAGGAAGCCAGGGTGCTGTGTCCCCTCTGAGCACGTGAGAAGAGGTCTGTGTAACAGGTGGTaGGCCACATCTGCATCCACA +
Preference number: 5 (lower is better)
Translates to: VFMRKPGCCVPSEHVRRGLCNRW*ATSAST
Trigger: TGTGGATGCAGATGTGGCCAACCACCTGTTACACAG...ACCTCTTCTCACGTGCTCAGAGGGGACACAGCACCCTGGCTTCCTCATGAAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS-3UTR CAA 90 bp TGTGTCCCCTCTGAGCACGTGAGAAGAGGTAGAAGCACAGAGGAAAACATAGACACCGTTGCGCGTGGCTaGCATGAGGAGCAGAGAGAC +
Preference number: 5 (lower is better)
Translates to: CVPSEHVRRGRSTEENIDTVARG*HEEQRD
Trigger: GTCTCTCTGCTCCTCATGCAAGCCACGCGCAACGGT...GTCTATGTTTTCCTCTGTGCTTCTACCTCTTCTCACGTGCTCAGAGGGGACACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS-3UTR CAA 90 bp TGTGTCCCCTCTGAGCACGTGAGAAGAGGTAGAAGCACAGAGGAAAACATAGACTGGCTGGTGTCCACATaGTCCAGGAGCACTCGCCCT +
Preference number: 5 (lower is better)
Translates to: CVPSEHVRRGRSTEENIDWLVST*SRSTRP
Trigger: AGGGCGAGTGCTCCTGGACAATGTGGACACCAGCCA...GTCTATGTTTTCCTCTGTGCTTCTACCTCTTCTCACGTGCTCAGAGGGGACACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS-3UTR CAA 90 bp GTCCCCTCTGAGCACGTGAGAAGAGGTAGAAGCACAGAGGAAAACATAGACCAGGCCAGTGGCCATTCTTaGCTTCTCGCTGGCTCCTCT +
Preference number: 5 (lower is better)
Translates to: VPSEHVRRGRSTEENIDQASGHS*LLAGSS
Trigger: AGAGGAGCCAGCGAGAAGCAAAGAATGGCCACTGGC...CTGGTCTATGTTTTCCTCTGTGCTTCTACCTCTTCTCACGTGCTCAGAGGGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000047970.14
CDS GCA 90 bp AAGCTTCAGGGCTTTGCGGTAGAGGGTGCTCAGCACAGCCACTCGTaGCTGAAGTGTCACTTTACGGACCTCATACCCATACTGATTCTG +
Preference number: 5 (lower is better)
Translates to: KLQGFAVEGAQHSHS*LKCHFTDLIPILIL
Trigger: CAGAATCAGTATGGGTATGAGGTCCGTAAAGTGACACTTCAGGCACGAGTGGCTGTGCTGAGCACCCTCTACCGCAAAGCCCTGAAGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000047970.14
ENSMUST00000095261.10
ENSMUST00000167360.8
ENSMUST00000171584.2
CDS GCA 90 bp ATGCCACTCAGTAACTCTGTCATGAGCTTAACCCGTGCATCCTTGTaGCGTAGCATCTCCTGGTTGCTGGCCATGATTCGGGTGGCAATC +
Preference number: 5 (lower is better)
Translates to: MPLSNSVMSLTRASL*RSISWLLAMIRVAI
Trigger: GATTGCCACCCGAATCATGGCCAGCAACCAGGAGATGCTACGGCACAAGGATGCACGGGTTAAGCTCATGACAGAGTTACTGAGTGGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000047970.14
ENSMUST00000095261.10
ENSMUST00000167360.8
CDS-3UTR CAA 90 bp GTTTTCATGAGGAAGCCAGGGTGCTGTGTCCCCTCTGAGCACGTGAGAAGAGGTCAAGACTGCTGCCAGTaGCAGAATGAGAAGACACAC +
Preference number: 5 (lower is better)
Translates to: VFMRKPGCCVPSEHVRRGQDCCQ*QNEKTH
Trigger: GTGTGTCTTCTCATTCTGCAACTGGCAGCAGTCTTG...ACCTCTTCTCACGTGCTCAGAGGGGACACAGCACCCTGGCTTCCTCATGAAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
ENSMUST00000171584.2
CDS-3UTR CAA 90 bp GGTCTGCTGCTTTGCTGGGCTCCAGTGCCCCAGACCTTTATTTTTGCCTTGAACGTGGCAATCACTTTGTaGACAGGTACCAGCAGCAGC +
Preference number: 5 (lower is better)
Translates to: GLLLCWAPVPQTFIFALNVAITL*TGTSSS
Trigger: GCTGCTGCTGGTACCTGTCAACAAAGTGATTGCCAC...GTTCAAGGCAAAAATAAAGGTCTGGGGCACTGGAGCCCAGCAAAGCAGCAGACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000171584.2
CDS-3UTR CAA 90 bp GTCCCCTCTGAGCACGTGAGAAGAGGTAGAAGCACAGAGGAAAACATAGACCAGCCTCAGGGCTGTAGCTaGGAAGATCGAGGAAACGCT +
Preference number: 5 (lower is better)
Translates to: VPSEHVRRGRSTEENIDQPQGCS*EDRGNA
Trigger: AGCGTTTCCTCGATCTTCCAAGCTACAGCCCTGAGG...CTGGTCTATGTTTTCCTCTGTGCTTCTACCTCTTCTCACGTGCTCAGAGGGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS-3UTR CAA 90 bp CCAGGAGTGGTTTTCATGAGGAAGCCAGGGTGCTGTGTCCCCTCTGAGCACGTGCATACCCTTTTTCACTaGGAGGTGACTGATGAAGGT +
Preference number: 5 (lower is better)
Translates to: PGVVFMRKPGCCVPSEHVHTLFH*EVTDEG
Trigger: ACCTTCATCAGTCACCTCCAAGTGAAAAAGGGTATG...CACGTGCTCAGAGGGGACACAGCACCCTGGCTTCCTCATGAAAACCACTCCTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS-3UTR CAA 90 bp GTTTTCATGAGGAAGCCAGGGTGCTGTGTCCCCTCTGAGCACGTGAGAAGAGGTATACTTAGATCATCATaGAGGGCGCAGGCCTCCAGA +
Preference number: 5 (lower is better)
Translates to: VFMRKPGCCVPSEHVRRGILRSS*RAQASR
Trigger: TCTGGAGGCCTGCGCCCTCAATGATGATCTAAGTAT...ACCTCTTCTCACGTGCTCAGAGGGGACACAGCACCCTGGCTTCCTCATGAAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS-3UTR CAA 90 bp GTCCCCTCTGAGCACGTGAGAAGAGGTAGAAGCACAGAGGAAAACATAGACCAGGAGTTTAGGATCGTGTaGAGCCTGTGGGCGATGGTC +
Preference number: 5 (lower is better)
Translates to: VPSEHVRRGRSTEENIDQEFRIV*SLWAMV
Trigger: GACCATCGCCCACAGGCTCAACACGATCCTAAACTC...CTGGTCTATGTTTTCCTCTGTGCTTCTACCTCTTCTCACGTGCTCAGAGGGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS TCA 90 bp GACTCCACGAGCAAGCAAGGGTGCCAACCAGGCATAGGAAAAGCGTaGCAGCCAACTCTCTCCATCTTCAGCTACCTCTGTTTCTTGACT +
Preference number: 5 (lower is better)
Translates to: DSTSKQGCQPGIGKA*QPTLSIFSYLCFLT
Trigger: AGTCAAGAAACAGAGGTAGCTGAAGATGGAGAGAGTTGGCTGTCACGCTTTTCCTATGCCTGGTTGGCACCCTTGCTTGCTCGTGGAGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000047970.14
ENSMUST00000095261.10
ENSMUST00000167360.8
ENSMUST00000171584.2
CDS CCA 90 bp TCTGTCATGAGCTTAACCCGTGCATCCTTGTGCCGTAGCATCTCCTaGTTGCTGGCCATGATTCGGGTGGCAATCACTTTGTTGACAGGT +
Preference number: 5 (lower is better)
Translates to: SVMSLTRASLCRSIS*LLAMIRVAITLLTG
Trigger: ACCTGTCAACAAAGTGATTGCCACCCGAATCATGGCCAGCAACCAGGAGATGCTACGGCACAAGGATGCACGGGTTAAGCTCATGACAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000047970.14
ENSMUST00000095261.10
ENSMUST00000167360.8
CDS CCA 90 bp ACTGTCTTGTTGGCAAAGCGTTTACAGATGGTTTGCTGGAGCAGCTaGTCTGTCTTCTGGTCCACACTTGCTGTGGCCTCGTCAATGCAC +
Preference number: 5 (lower is better)
Translates to: TVLLAKRLQMVCWSS*SVFWSTLAVASSMH
Trigger: GTGCATTGACGAGGCCACAGCAAGTGTGGACCAGAAGACAGACCAGCTGCTCCAGCAAACCATCTGTAAACGCTTTGCCAACAAGACAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000047970.14
ENSMUST00000095261.10
ENSMUST00000167360.8
CDS-3UTR CAA 90 bp GGAGTGGTTTTCATGAGGAAGCCAGGGTGCTGTGTCCCCTCTGAGCACGTGAGACATACCCTTTTTCACTaGGAGGTGACTGATGAAGGT +
Preference number: 5 (lower is better)
Translates to: GVVFMRKPGCCVPSEHVRHTLFH*EVTDEG
Trigger: ACCTTCATCAGTCACCTCCAAGTGAAAAAGGGTATG...TCTCACGTGCTCAGAGGGGACACAGCACCCTGGCTTCCTCATGAAAACCACTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS-3UTR CAA 90 bp GTTTTCATGAGGAAGCCAGGGTGCTGTGTCCCCTCTGAGCACGTGAGAAGAGGTGTCAGCACTGTCTTGTaGGCAAAGCGTTTACAGATG +
Preference number: 5 (lower is better)
Translates to: VFMRKPGCCVPSEHVRRGVSTVL*AKRLQM
Trigger: CATCTGTAAACGCTTTGCCAACAAGACAGTGCTGAC...ACCTCTTCTCACGTGCTCAGAGGGGACACAGCACCCTGGCTTCCTCATGAAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS-3UTR CAA 90 bp CTGTGGAAGGGAAACCGGCCCCGAATTCTGAGTAAAAAGGCCCATGTGGGTTGGATGGTCAGCACTGTCTaGTTGGCAAAGCGTTTACAG +
Preference number: 5 (lower is better)
Translates to: LWKGNRPRILSKKAHVGWMVSTV*LAKRLQ
Trigger: CTGTAAACGCTTTGCCAACAAGACAGTGCTGACCAT...CCAACCCACATGGGCCTTTTTACTCAGAATTCGGGGCCGGTTTCCCTTCCACAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS-3UTR CAA 90 bp GTCCCCTCTGAGCACGTGAGAAGAGGTAGAAGCACAGAGGAAAACATAGACCAGCGGTCCAGGGATACTTaGGATTCCAAGAGACCATTG +
Preference number: 5 (lower is better)
Translates to: VPSEHVRRGRSTEENIDQRSRDT*DSKRPL
Trigger: CAATGGTCTCTTGGAATCCAAAGTATCCCTGGACCG...CTGGTCTATGTTTTCCTCTGTGCTTCTACCTCTTCTCACGTGCTCAGAGGGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS CCA 90 bp GCAAAGCGTTTACAGATGGTTTGCTGGAGCAGCTGGTCTGTCTTCTaGTCCACACTTGCTGTGGCCTCGTCAATGCACAAGATTTTAGCA +
Preference number: 5 (lower is better)
Translates to: AKRLQMVCWSSWSVF*STLAVASSMHKILA
Trigger: TGCTAAAATCTTGTGCATTGACGAGGCCACAGCAAGTGTGGACCAGAAGACAGACCAGCTGCTCCAGCAAACCATCTGTAAACGCTTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000047970.14
ENSMUST00000095261.10
ENSMUST00000167360.8
CDS-3UTR CAA 90 bp TGTGTCCCCTCTGAGCACGTGAGAAGAGGTAGAAGCACAGAGGAAAACATAGACTCCCACCTGAAGAATTaGATGACTCGAATGCCACTC +
Preference number: 5 (lower is better)
Translates to: CVPSEHVRRGRSTEENIDSHLKN*MTRMPL
Trigger: GAGTGGCATTCGAGTCATCAAATTCTTCAGGTGGGA...GTCTATGTTTTCCTCTGTGCTTCTACCTCTTCTCACGTGCTCAGAGGGGACACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
CDS CCA 72 bp GCGAGGAGCGCGTGGGGAAGGGCGCTGAGCACCAGCTaGGTGAAGCAGTGGCCCGTCGTGTCCCCTTCCCAC +
Preference number: 6 (lower is better)
Translates to: ARSAWGRALSTS*VKQWPVVSPSH
Trigger: GTGGGAAGGGGACACGACGGGCCACTGCTTCACCCAGCTGGTGCTCAGCGCCCTTCCCCACGCGCTCCTCGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
ENSMUST00000171584.2
CDS GCA 72 bp TGCAGCCTGCGGGGGAGGCGGCAAGTGTCCCGGGGCTaGTGGAGCTCTCCTCGGACTCCACGAGCAAGCAAG +
Preference number: 6 (lower is better)
Translates to: CSLRGRRQVSRG*WSSPRTPRASK
Trigger: CTTGCTTGCTCGTGGAGTCCGAGGAGAGCTCCAGCAGCCCCGGGACACTTGCCGCCTCCCCCGCAGGCTGCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000047970.14
ENSMUST00000095261.10
ENSMUST00000167360.8
ENSMUST00000171584.2
CDS GCA 72 bp AGGCCCACCAGCCCTGGGTTGGCAAGGCCCTGCTGGTaGTGCACCAGGGCAATGCCCGCAATGGCGCTGACC +
Preference number: 6 (lower is better)
Translates to: RPTSPGLARPCW*CTRAMPAMALT
Trigger: GGTCAGCGCCATTGCGGGCATTGCCCTGGTGCAGCACCAGCAGGGCCTTGCCAACCCAGGGCTGGTGGGCCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000047970.14
ENSMUST00000095261.10
ENSMUST00000167360.8
CDS GCA 72 bp AGCACGAGGCCCACCAGCCCTGGGTTGGCAAGGCCCTaGTGGTGCTGCACCAGGGCAATGCCCGCAATGGCG +
Preference number: 6 (lower is better)
Translates to: STRPTSPGLARP*WCCTRAMPAMA
Trigger: CGCCATTGCGGGCATTGCCCTGGTGCAGCACCAGCAGGGCCTTGCCAACCCAGGGCTGGTGGGCCTCGTGCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000047970.14
ENSMUST00000095261.10
ENSMUST00000167360.8
CDS CCA 72 bp CCCAAGTGGCAGGCACTGAGGACGGCGAGGAGCGCGTaGGGAAGGGCGCTGAGCACCAGCTGGGTGAAGCAG +
Preference number: 6 (lower is better)
Translates to: PKWQALRTARSA*GRALSTSWVKQ
Trigger: CTGCTTCACCCAGCTGGTGCTCAGCGCCCTTCCCCACGCGCTCCTCGCCGTCCTCAGTGCCTGCCACTTGGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
ENSMUST00000171584.2
CDS CCA 72 bp AGCCTGCGGGGGAGGCGGCAAGTGTCCCGGGGCTGCTaGAGCTCTCCTCGGACTCCACGAGCAAGCAAGGGT +
Preference number: 6 (lower is better)
Translates to: SLRGRRQVSRGC*SSPRTPRASKG
Trigger: ACCCTTGCTTGCTCGTGGAGTCCGAGGAGAGCTCCAGCAGCCCCGGGACACTTGCCGCCTCCCCCGCAGGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000047970.14
ENSMUST00000095261.10
ENSMUST00000167360.8
ENSMUST00000171584.2
CDS CCA 72 bp ACGAGGCCCACCAGCCCTGGGTTGGCAAGGCCCTGCTaGTGCTGCACCAGGGCAATGCCCGCAATGGCGCTG +
Preference number: 6 (lower is better)
Translates to: TRPTSPGLARPC*CCTRAMPAMAL
Trigger: CAGCGCCATTGCGGGCATTGCCCTGGTGCAGCACCAGCAGGGCCTTGCCAACCCAGGGCTGGTGGGCCTCGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000047970.14
ENSMUST00000095261.10
ENSMUST00000167360.8
CDS GCA 72 bp CGGTGGGAGGGCGGCTGGGCCCAAGCTTCAGGGCTTTaGGGTAGAGGGTGCTCAGCACAGCCACTCGTGCCT +
Preference number: 6 (lower is better)
Translates to: RWEGGWAQASGL*GRGCSAQPLVP
Trigger: AGGCACGAGTGGCTGTGCTGAGCACCCTCTACCGCAAAGCCCTGAAGCTTGGGCCCAGCCGCCCTCCCACCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000047970.14
ENSMUST00000095261.10
ENSMUST00000167360.8
ENSMUST00000171584.2
CDS CCA 72 bp CTAGTAGGTTCAGGACCTCCCCGGTGGGAGGGCGGCTaGGCCCAAGCTTCAGGGCTTTGCGGTAGAGGGTGC +
Preference number: 6 (lower is better)
Translates to: LVGSGPPRWEGG*AQASGLCGRGC
Trigger: GCACCCTCTACCGCAAAGCCCTGAAGCTTGGGCCCAGCCGCCCTCCCACCGGGGAGGTCCTGAACCTACTAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000047970.14
ENSMUST00000095261.10
ENSMUST00000167360.8
ENSMUST00000171584.2
CDS CCA 72 bp TCCACACTTCCCTGGGTCAGCCAGCTGATGCGCTGCTaGTGGGGTGACTGCAGTGGCTGGCTGTGGGGCTCC +
Preference number: 6 (lower is better)
Translates to: STLPWVSQLMRC*WGDCSGWLWGS
Trigger: GGAGCCCCACAGCCAGCCACTGCAGTCACCCCACCAGCAGCGCATCAGCTGGCTGACCCAGGGAAGTGTGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000047970.14
ENSMUST00000095261.10
ENSMUST00000167360.8
CDS GCA 72 bp ATCATGAGTCCAGGGCTCTTGTGGTCCCCCAGGGGCTaGCCAGCCCAACCCATAGGCCAAGACTGCTGCCAG +
Preference number: 6 (lower is better)
Translates to: IMSPGLLWSPRG*PAQPIGQDCCQ
Trigger: CTGGCAGCAGTCTTGGCCTATGGGTTGGGCTGGGCAGCCCCTGGGGGACCACAAGAGCCCTGGACTCATGAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000047970.14
ENSMUST00000095261.10
ENSMUST00000167360.8
ENSMUST00000171584.2
CDS GCA 72 bp TCGCTGGTTCTCCTCTTCAAACCTGTAAGTGGCCCCTaGAGCCCGGAGCACAGGGAGGCCTGCCAGGGTGTC +
Preference number: 6 (lower is better)
Translates to: SLVLLFKPVSGP*SPEHREACQGV
Trigger: GACACCCTGGCAGGCCTCCCTGTGCTCCGGGCTGCAGGGGCCACTTACAGGTTTGAAGAGGAGAACCAGCGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000047970.14
ENSMUST00000095261.10
ENSMUST00000167360.8
CDS GCA 72 bp AATTCCACACTTCCCTGGGTCAGCCAGCTGATGCGCTaGTGGTGGGGTGACTGCAGTGGCTGGCTGTGGGGC +
Preference number: 6 (lower is better)
Translates to: NSTLPWVSQLMR*WWGDCSGWLWG
Trigger: GCCCCACAGCCAGCCACTGCAGTCACCCCACCAGCAGCGCATCAGCTGGCTGACCCAGGGAAGTGTGGAATT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000047970.14
ENSMUST00000095261.10
ENSMUST00000167360.8
CDS CCA 72 bp AGAGGACAGGAAGGGATCATGAGTCCAGGGCTCTTGTaGTCCCCCAGGGGCTGCCCAGCCCAACCCATAGGC +
Preference number: 6 (lower is better)
Translates to: RGQEGIMSPGLL*SPRGCPAQPIG
Trigger: GCCTATGGGTTGGGCTGGGCAGCCCCTGGGGGACCACAAGAGCCCTGGACTCATGATCCCTTCCTGTCCTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000047970.14
ENSMUST00000095261.10
ENSMUST00000167360.8
ENSMUST00000171584.2
CDS CCA 72 bp ATGCGCTGCTGGTGGGGTGACTGCAGTGGCTGGCTGTaGGGCTCCTGGGGAACGTCACAGGAATACTCCTCC +
Preference number: 6 (lower is better)
Translates to: MRCWWGDCSGWL*GSWGTSQEYSS
Trigger: GGAGGAGTATTCCTGTGACGTTCCCCAGGAGCCCCACAGCCAGCCACTGCAGTCACCCCACCAGCAGCGCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000047970.14
ENSMUST00000095261.10
ENSMUST00000167360.8
CDS CAA 90 bp CCCAGGGGCTGCCCAGCCCAACCCATAGGCCAAGACTGCTGCCAGTaGCAGAATGAGAAGACACACACGGCCCAGAGGTCCTGGGAGAAG +
Preference number: 6 (lower is better)
Translates to: PRGCPAQPIGQDCCQ*QNEKTHTAQRSWEK
Trigger: CTTCTCCCAGGACCTCTGGGCCGTGTGTGTCTTCTCATTCTGCAACTGGCAGCAGTCTTGGCCTATGGGTTGGGCTGGGCAGCCCCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000047970.14
ENSMUST00000095261.10
ENSMUST00000167360.8
ENSMUST00000171584.2
CDS TCA 72 bp AGTCGGAGGCGCCAGCCAGGATTGAGAGCTGGGGAGTaGTTGGTAGTCCTTGGGGTGCCCAAGTGGCAGGCA +
Preference number: 6 (lower is better)
Translates to: SRRRQPGLRAGE*LVVLGVPKWQA
Trigger: TGCCTGCCACTTGGGCACCCCAAGGACTACCAATCACTCCCCAGCTCTCAATCCTGGCTGGCGCCTCCGACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
ENSMUST00000171584.2
CDS GCA 72 bp CCCAGGGGCTGCCCAGCCCAACCCATAGGCCAAGACTaGTGCCAGTTGCAGAATGAGAAGACACACACGGCC +
Preference number: 6 (lower is better)
Translates to: PRGCPAQPIGQD*CQLQNEKTHTA
Trigger: GGCCGTGTGTGTCTTCTCATTCTGCAACTGGCAGCAGTCTTGGCCTATGGGTTGGGCTGGGCAGCCCCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000047970.14
ENSMUST00000095261.10
ENSMUST00000167360.8
ENSMUST00000171584.2
CDS GCA 72 bp CAGGGCCCTCCACAGTTGGGCCCCCTCCTTCCAATGTaGTTGGAAAACTCGGGCCAGGAAGGCAGGATGCAG +
Preference number: 6 (lower is better)
Translates to: QGPPQLGPLLPM*LENSGQEGRMQ
Trigger: CTGCATCCTGCCTTCCTGGCCCGAGTTTTCCAAGCACATTGGAAGGAGGGGGCCCAACTGTGGAGGGCCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000047970.14
ENSMUST00000095261.10
ENSMUST00000167360.8
ENSMUST00000171584.2
CDS GCA 72 bp CACCAGGGCAATGCCCGCAATGGCGCTGACCACTGCTaGCCCCATGAGCTGCAGTCGAATGTCCAACCACTG +
Preference number: 6 (lower is better)
Translates to: HQGNARNGADHC*PHELQSNVQPL
Trigger: CAGTGGTTGGACATTCGACTGCAGCTCATGGGGGCAGCAGTGGTCAGCGCCATTGCGGGCATTGCCCTGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000047970.14
ENSMUST00000095261.10
ENSMUST00000167360.8
CDS GCA 72 bp CTGCACCAGGGCAATGCCCGCAATGGCGCTGACCACTaGTGCCCCCATGAGCTGCAGTCGAATGTCCAACCA +
Preference number: 6 (lower is better)
Translates to: LHQGNARNGADH*CPHELQSNVQP
Trigger: TGGTTGGACATTCGACTGCAGCTCATGGGGGCAGCAGTGGTCAGCGCCATTGCGGGCATTGCCCTGGTGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000047970.14
ENSMUST00000095261.10
ENSMUST00000167360.8
CDS CCA 72 bp GCCAGGATTGAGAGCTGGGGAGTGATTGGTAGTCCTTaGGGTGCCCAAGTGGCAGGCACTGAGGACGGCGAG +
Preference number: 6 (lower is better)
Translates to: ARIESWGVIGSP*GAQVAGTEDGE
Trigger: CTCGCCGTCCTCAGTGCCTGCCACTTGGGCACCCCAAGGACTACCAATCACTCCCCAGCTCTCAATCCTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
ENSMUST00000171584.2
CDS CCA 72 bp TGCTGCGAGTCGGAGGCGCCAGCCAGGATTGAGAGCTaGGGAGTGATTGGTAGTCCTTGGGGTGCCCAAGTG +
Preference number: 6 (lower is better)
Translates to: CCESEAPARIES*GVIGSPWGAQV
Trigger: CACTTGGGCACCCCAAGGACTACCAATCACTCCCCAGCTCTCAATCCTGGCTGGCGCCTCCGACTCGCAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000047970.14
ENSMUST00000167360.8
ENSMUST00000171584.2
CDS CCA 72 bp CCAAGAGTCGCTGGTTCTCCTCTTCAAACCTGTAAGTaGCCCCTGCAGCCCGGAGCACAGGGAGGCCTGCCA +
Preference number: 6 (lower is better)
Translates to: PRVAGSPLQTCK*PLQPGAQGGLP
Trigger: TGGCAGGCCTCCCTGTGCTCCGGGCTGCAGGGGCCACTTACAGGTTTGAAGAGGAGAACCAGCGACTCTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000047970.14
ENSMUST00000095261.10
ENSMUST00000167360.8
CDS CCA 72 bp TGGTGTCCACATTGTCCAGGAGCACTCGCCCTGCGTTaGGCTCCAGCAGCCGGAAGAGCACCAGAAACAGGG +
Preference number: 6 (lower is better)
Translates to: WCPHCPGALALR*APAAGRAPETG
Trigger: CCCTGTTTCTGGTGCTCTTCCGGCTGCTGGAGCCCAACGCAGGGCGAGTGCTCCTGGACAATGTGGACACCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000047970.14
ENSMUST00000095261.10
ENSMUST00000167360.8
CDS CAA 72 bp GGCCCTCCACAGTTGGGCCCCCTCCTTCCAATGTGCTaGGAAAACTCGGGCCAGGAAGGCAGGATGCAGCCT +
Preference number: 6 (lower is better)
Translates to: GPPQLGPLLPMC*ENSGQEGRMQP
Trigger: AGGCTGCATCCTGCCTTCCTGGCCCGAGTTTTCCAAGCACATTGGAAGGAGGGGGCCCAACTGTGGAGGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000047970.14
ENSMUST00000095261.10
ENSMUST00000167360.8
ENSMUST00000171584.2
CDS CAA 72 bp CTGGTGTCCACATTGTCCAGGAGCACTCGCCCTGCGTaGGGCTCCAGCAGCCGGAAGAGCACCAGAAACAGG +
Preference number: 6 (lower is better)
Translates to: LVSTLSRSTRPA*GSSSRKSTRNR
Trigger: CCTGTTTCTGGTGCTCTTCCGGCTGCTGGAGCCCAACGCAGGGCGAGTGCTCCTGGACAATGTGGACACCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000047970.14
ENSMUST00000095261.10
ENSMUST00000167360.8
CDS CAA 90 bp AGACCAGAACCTAGGACAGCCAGGAGGCCCAGCAGGCCCACGGAATaGGCCAGCAGGATGTTGAGGAGGAAGGGCAGGCTGTCGTCTACA +
Preference number: 6 (lower is better)
Translates to: RPEPRTARRPSRPTE*ASRMLRRKGRLSST
Trigger: TGTAGACGACAGCCTGCCCTTCCTCCTCAACATCCTGCTGGCCAATTCCGTGGGCCTGCTGGGCCTCCTGGCTGTCCTAGGTTCTGGTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000047970.14
ENSMUST00000095261.10
ENSMUST00000167360.8
CDS TCA 72 bp GCAGGCCCCAGGCCTCATGGAAGCTGCCAGCAAAGTTaGGCAGCCTCTCGGAGTCGGTGCCTAGTAGGTTCA +
Preference number: 6 (lower is better)
Translates to: AGPRPHGSCQQS*AASRSRCLVGS
Trigger: TGAACCTACTAGGCACCGACTCCGAGAGGCTGCTCAACTTTGCTGGCAGCTTCCATGAGGCCTGGGGCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000047970.14
ENSMUST00000095261.10
ENSMUST00000167360.8
ENSMUST00000171584.2
CDS TCA 72 bp GTCGCTCGACGCTCACCATCATGGCTTCCGTCTGTGTaGAACTGCTCACCAGACCCGAGAGCAGGCCCGTCA +
Preference number: 6 (lower is better)
Translates to: VARRSPSWLPSV*NCSPDPRAGPS
Trigger: TGACGGGCCTGCTCTCGGGTCTGGTGAGCAGTTTCACACAGACGGAAGCCATGATGGTGAGCGTCGAGCGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000047970.14
ENSMUST00000095261.10
ENSMUST00000167360.8
CDS CCA 72 bp TACACCAGCACCACGTCCTGGAATTCCACACTTCCCTaGGTCAGCCAGCTGATGCGCTGCTGGTGGGGTGAC +
Preference number: 6 (lower is better)
Translates to: YTSTTSWNSTLP*VSQLMRCWWGD
Trigger: GTCACCCCACCAGCAGCGCATCAGCTGGCTGACCCAGGGAAGTGTGGAATTCCAGGACGTGGTGCTGGTGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000047970.14
ENSMUST00000095261.10
ENSMUST00000167360.8
CDS CCA 72 bp TTTGGCAGCCCTGGCCGGTACACCAGCACCACGTCCTaGAATTCCACACTTCCCTGGGTCAGCCAGCTGATG +
Preference number: 6 (lower is better)
Translates to: FGSPGRYTSTTS*NSTLPWVSQLM
Trigger: CATCAGCTGGCTGACCCAGGGAAGTGTGGAATTCCAGGACGTGGTGCTGGTGTACCGGCCAGGGCTGCCAAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000047970.14
ENSMUST00000095261.10
ENSMUST00000167360.8
CDS CCA 72 bp AGACACAGCAGCTGTCTCTGTCCTAGGGACAGGTTCTaGCCCCTTTCTCCCAGCTCTCCATCCAGGCCACCC +
Preference number: 6 (lower is better)
Translates to: RHSSCLCPRDRF*PLSPSSPSRPP
Trigger: GGGTGGCCTGGATGGAGAGCTGGGAGAAAGGGGCCAGAACCTGTCCCTAGGACAGAGACAGCTGCTGTGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095261.10
ENSMUST00000167360.8
CDS CAA 90 bp ATGGCCGAAGGACCCCAGAAGCCCCTCACCTTAACCCGTGCATCCTaGTGCCGTAGCATCTCCTGGTTGCTGGCCATGATTCGGGTGGCA +
Preference number: 6 (lower is better)
Translates to: MAEGPQKPLTLTRAS*CRSISWLLAMIRVA
Trigger: TGCCACCCGAATCATGGCCAGCAACCAGGAGATGCTACGGCACAAGGATGCACGGGTTAAGGTGAGGGGCTTCTGGGGTCCTTCGGCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000171584.2
CDS GCA 72 bp GTGGCCATTCTTTGCTTCTCGCTGGCTCCTCTGACATaGCTGGGACTCACCCATGGCGACAGCCACCTCACT +
Preference number: 6 (lower is better)
Translates to: VAILCFSLAPLT*LGLTHGDSHLT
Trigger: AGTGAGGTGGCTGTCGCCATGGGTGAGTCCCAGGCATGTCAGAGGAGCCAGCGAGAAGCAAAGAATGGCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000047970.14
CDS GCA 72 bp CCCCAGAAGCCCCTCACCTTAACCCGTGCATCCTTGTaGCGTAGCATCTCCTGGTTGCTGGCCATGATTCGG +
Preference number: 6 (lower is better)
Translates to: PQKPLTLTRASL*RSISWLLAMIR
Trigger: CCGAATCATGGCCAGCAACCAGGAGATGCTACGGCACAAGGATGCACGGGTTAAGGTGAGGGGCTTCTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000171584.2
CDS CCA 72 bp GAGAAGACACACACGGCCCAGAGGTCCTGGGAGAAGTaGGGGCAGAAATGTACCTCGCTGGCAATGCCACAG +
Preference number: 6 (lower is better)
Translates to: EKTHTAQRSWEK*GQKCTSLAMPQ
Trigger: CTGTGGCATTGCCAGCGAGGTACATTTCTGCCCCCACTTCTCCCAGGACCTCTGGGCCGTGTGTGTCTTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000047970.14
ENSMUST00000095261.10
ENSMUST00000167360.8
ENSMUST00000171584.2
CDS CCA 72 bp AGACACAGCAGCTGTCTCTGTCCTAGGGACAGGTTCTaGCCCCTTTCTCCCAGCTCTCCATCCAGGCCACCT +
Preference number: 6 (lower is better)
Translates to: RHSSCLCPRDRF*PLSPSSPSRPP
Trigger: AGGTGGCCTGGATGGAGAGCTGGGAGAAAGGGGCCAGAACCTGTCCCTAGGACAGAGACAGCTGCTGTGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000047970.14
CDS CAA 90 bp CGTAGCATCTCCTGGTTGCTGGCCATGATTCGGGTGGCAATCACTTaGTTGACAGGTACCAGCAGCAGCGCCAAGACCAGCCCAGCCAGG +
Preference number: 6 (lower is better)
Translates to: RSISWLLAMIRVAIT*LTGTSSSAKTSPAR
Trigger: CCTGGCTGGGCTGGTCTTGGCGCTGCTGCTGGTACCTGTCAACAAAGTGATTGCCACCCGAATCATGGCCAGCAACCAGGAGATGCTACG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000047970.14
ENSMUST00000095261.10
ENSMUST00000167360.8
ENSMUST00000171584.2
CDS CAA 90 bp AGCATCTCCTGGTTGCTGGCCATGATTCGGGTGGCAATCACTTTGTaGACAGGTACCAGCAGCAGCGCCAAGACCAGCCCAGCCAGGAAG +
Preference number: 6 (lower is better)
Translates to: SISWLLAMIRVAITL*TGTSSSAKTSPARK
Trigger: CTTCCTGGCTGGGCTGGTCTTGGCGCTGCTGCTGGTACCTGTCAACAAAGTGATTGCCACCCGAATCATGGCCAGCAACCAGGAGATGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000047970.14
ENSMUST00000095261.10
ENSMUST00000167360.8
ENSMUST00000171584.2
CDS CCA 72 bp CAACATCCAAAGGCCCTGTACAGGGCCCTCCACAGTTaGGCCCCCTCCTTCCAATGTGCTTGGAAAACTCGG +
Preference number: 6 (lower is better)
Translates to: QHPKALYRALHS*APSFQCAWKTR
Trigger: CCGAGTTTTCCAAGCACATTGGAAGGAGGGGGCCCAACTGTGGAGGGCCCTGTACAGGGCCTTTGGATGTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000047970.14
ENSMUST00000095261.10
ENSMUST00000167360.8
ENSMUST00000171584.2
CDS CAA 72 bp GGACCCCAGAAGCCCCTCACCTTAACCCGTGCATCCTaGTGCCGTAGCATCTCCTGGTTGCTGGCCATGATT +
Preference number: 6 (lower is better)
Translates to: GPQKPLTLTRAS*CRSISWLLAMI
Trigger: AATCATGGCCAGCAACCAGGAGATGCTACGGCACAAGGATGCACGGGTTAAGGTGAGGGGCTTCTGGGGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000171584.2
CDS CAA 90 bp TTCTCCCAGCTCTCCATCCAGGCCACCTGTAAGCAGAGCACTGCATaGCCAGTGGCCATTCTTTGCTTCTCGCTGGCTCCTCTGACATGC +
Preference number: 6 (lower is better)
Translates to: FSQLSIQATCKQSTA*PVAILCFSLAPLTC
Trigger: GCATGTCAGAGGAGCCAGCGAGAAGCAAAGAATGGCCACTGGCAATGCAGTGCTCTGCTTACAGGTGGCCTGGATGGAGAGCTGGGAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000047970.14
CDS TCA 72 bp CCAACCCATAGGCCAAGACTGCTGCCAGTTGCAGAATaGGAAGACACACACGGCCCAGAGGTCCTGGGAGAA +
Preference number: 6 (lower is better)
Translates to: PTHRPRLLPVAE*EDTHGPEVLGE
Trigger: TTCTCCCAGGACCTCTGGGCCGTGTGTGTCTTCTCATTCTGCAACTGGCAGCAGTCTTGGCCTATGGGTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000047970.14
ENSMUST00000095261.10
ENSMUST00000167360.8
ENSMUST00000171584.2
CDS GCA 72 bp CACAGCCCGGAGAAGGGTGCAGAGGGAGTTCACCCCTaGAATGGTTGCATACACGATGAGGTAGAAGTGGAC +
Preference number: 6 (lower is better)
Translates to: HSPEKGAEGVHP*NGCIHDEVEVD
Trigger: GTCCACTTCTACCTCATCGTGTATGCAACCATTGCAGGGGTGAACTCCCTCTGCACCCTTCTCCGGGCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000047970.14
ENSMUST00000095261.10
ENSMUST00000167360.8
CDS GCA 72 bp TCTCCATCCAGGCCACCTGTAAGCAGAGCACTGCATTaGCAGTGGCCATTCTTTGCTTCTCGCTGGCTCCTC +
Preference number: 6 (lower is better)
Translates to: SPSRPPVSRALH*QWPFFASRWLL
Trigger: GAGGAGCCAGCGAGAAGCAAAGAATGGCCACTGGCAATGCAGTGCTCTGCTTACAGGTGGCCTGGATGGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000047970.14
CDS CCA 72 bp TGCTGCGAGTCGGAGGCGCCAGCCAGGATTGAGAGCTaGGGAGTGATTGGTAGTCCTGGGAAAGAAAGAGAA +
Preference number: 6 (lower is better)
Translates to: CCESEAPARIES*GVIGSPGKERE
Trigger: TTCTCTTTCTTTCCCAGGACTACCAATCACTCCCCAGCTCTCAATCCTGGCTGGCGCCTCCGACTCGCAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095261.10
CDS CAA 72 bp TGGTTGCTGGCCATGATTCGGGTGGCAATCACTTTGTaGACAGGTACCAGCAGCAGCGCCAAGACCAGCCCA +
Preference number: 6 (lower is better)
Translates to: WLLAMIRVAITL*TGTSSSAKTSP
Trigger: TGGGCTGGTCTTGGCGCTGCTGCTGGTACCTGTCAACAAAGTGATTGCCACCCGAATCATGGCCAGCAACCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000047970.14
ENSMUST00000095261.10
ENSMUST00000167360.8
ENSMUST00000171584.2
CDS CAA 72 bp TCCTGGTTGCTGGCCATGATTCGGGTGGCAATCACTTaGTTGACAGGTACCAGCAGCAGCGCCAAGACCAGC +
Preference number: 6 (lower is better)
Translates to: SWLLAMIRVAIT*LTGTSSSAKTS
Trigger: GCTGGTCTTGGCGCTGCTGCTGGTACCTGTCAACAAAGTGATTGCCACCCGAATCATGGCCAGCAACCAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000047970.14
ENSMUST00000095261.10
ENSMUST00000167360.8
ENSMUST00000171584.2
CDS CAA 90 bp CCCCTCACCTTAACCCGTGCATCCTTGTGCCGTAGCATCTCCTGGTaGCTGGCCATGATTCGGGTGGCAATCACTTTGTTGACAGGTACC +
Preference number: 6 (lower is better)
Translates to: PLTLTRASLCRSISW*LAMIRVAITLLTGT
Trigger: GGTACCTGTCAACAAAGTGATTGCCACCCGAATCATGGCCAGCAACCAGGAGATGCTACGGCACAAGGATGCACGGGTTAAGGTGAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000171584.2
CDS GCA 72 bp GGCTTTGCGGTAGAGGGTGCTCAGCACAGCCACTCGTaGCTGAAGTGTCACTTTACGGACCTCATACCCATA +
Preference number: 6 (lower is better)
Translates to: GFAVEGAQHSHS*LKCHFTDLIPI
Trigger: TATGGGTATGAGGTCCGTAAAGTGACACTTCAGGCACGAGTGGCTGTGCTGAGCACCCTCTACCGCAAAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000047970.14
ENSMUST00000095261.10
ENSMUST00000167360.8
ENSMUST00000171584.2
CDS GCA 72 bp GAGAAGGGTGCAGAGGGAGTTCACCCCTGCAATGGTTaGATACACGATGAGGTAGAAGTGGACGTCTGCGGT +
Preference number: 6 (lower is better)
Translates to: EKGAEGVHPCNG*IHDEVEVDVCG
Trigger: ACCGCAGACGTCCACTTCTACCTCATCGTGTATGCAACCATTGCAGGGGTGAACTCCCTCTGCACCCTTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000047970.14
ENSMUST00000095261.10
ENSMUST00000167360.8
CDS TCA 72 bp AGAGGGAGTTCACCCCTGCAATGGTTGCATACACGATaGGGTAGAAGTGGACGTCTGCGGTGCCATTGGAAG +
Preference number: 6 (lower is better)
Translates to: RGSSPLQWLHTR*GRSGRLRCHWK
Trigger: CTTCCAATGGCACCGCAGACGTCCACTTCTACCTCATCGTGTATGCAACCATTGCAGGGGTGAACTCCCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000047970.14
ENSMUST00000095261.10
ENSMUST00000167360.8
CDS GCA 72 bp AATGGTTGCATACACGATGAGGTAGAAGTGGACGTCTaGGGTGCCATTGGAAGCAGCCTTGTGCAGTGGGGT +
Preference number: 6 (lower is better)
Translates to: NGCIHDEVEVDV*GAIGSSLVQWG
Trigger: ACCCCACTGCACAAGGCTGCTTCCAATGGCACCGCAGACGTCCACTTCTACCTCATCGTGTATGCAACCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000047970.14
ENSMUST00000095261.10
ENSMUST00000167360.8
CDS CCA 72 bp AGCTTAACCCGTGCATCCTTGTGCCGTAGCATCTCCTaGTTGCTGGCCATGATTCGGGTGGCAATCACTTTG +
Preference number: 6 (lower is better)
Translates to: SLTRASLCRSIS*LLAMIRVAITL
Trigger: CAAAGTGATTGCCACCCGAATCATGGCCAGCAACCAGGAGATGCTACGGCACAAGGATGCACGGGTTAAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000047970.14
ENSMUST00000095261.10
ENSMUST00000167360.8
CDS CCA 72 bp TTGGCAAAGCGTTTACAGATGGTTTGCTGGAGCAGCTaGTCTGTCTTCTGGTCCACACTTGCTGTGGCCTCG +
Preference number: 6 (lower is better)
Translates to: LAKRLQMVCWSS*SVFWSTLAVAS
Trigger: CGAGGCCACAGCAAGTGTGGACCAGAAGACAGACCAGCTGCTCCAGCAAACCATCTGTAAACGCTTTGCCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000047970.14
ENSMUST00000095261.10
ENSMUST00000167360.8
CDS CCA 72 bp ACCTTAACCCGTGCATCCTTGTGCCGTAGCATCTCCTaGTTGCTGGCCATGATTCGGGTGGCAATCACTTTG +
Preference number: 6 (lower is better)
Translates to: TLTRASLCRSIS*LLAMIRVAITL
Trigger: CAAAGTGATTGCCACCCGAATCATGGCCAGCAACCAGGAGATGCTACGGCACAAGGATGCACGGGTTAAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000171584.2
CDS CAA 90 bp GTCATGAGCTTAACCCGTGCATCCTTGTGCCGTAGCATCTCCTGGTaGCTGGCCATGATTCGGGTGGCAATCACTTTGTTGACAGGTACC +
Preference number: 6 (lower is better)
Translates to: VMSLTRASLCRSISW*LAMIRVAITLLTGT
Trigger: GGTACCTGTCAACAAAGTGATTGCCACCCGAATCATGGCCAGCAACCAGGAGATGCTACGGCACAAGGATGCACGGGTTAAGCTCATGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000047970.14
ENSMUST00000095261.10
ENSMUST00000167360.8
CDS TCA 72 bp AGCAAGCAAGGGTGCCAACCAGGCATAGGAAAAGCGTaGCAGCCAACTCTCTCCATCTTCAGCTACCTCTGT +
Preference number: 6 (lower is better)
Translates to: SKQGCQPGIGKA*QPTLSIFSYLC
Trigger: ACAGAGGTAGCTGAAGATGGAGAGAGTTGGCTGTCACGCTTTTCCTATGCCTGGTTGGCACCCTTGCTTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000047970.14
ENSMUST00000095261.10
ENSMUST00000167360.8
ENSMUST00000171584.2
CDS GCA 72 bp AGTAACTCTGTCATGAGCTTAACCCGTGCATCCTTGTaGCGTAGCATCTCCTGGTTGCTGGCCATGATTCGG +
Preference number: 6 (lower is better)
Translates to: SNSVMSLTRASL*RSISWLLAMIR
Trigger: CCGAATCATGGCCAGCAACCAGGAGATGCTACGGCACAAGGATGCACGGGTTAAGCTCATGACAGAGTTACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000047970.14
ENSMUST00000095261.10
ENSMUST00000167360.8
CDS CCA 72 bp TTACAGATGGTTTGCTGGAGCAGCTGGTCTGTCTTCTaGTCCACACTTGCTGTGGCCTCGTCAATGCACAAG +
Preference number: 6 (lower is better)
Translates to: LQMVCWSSWSVF*STLAVASSMHK
Trigger: CTTGTGCATTGACGAGGCCACAGCAAGTGTGGACCAGAAGACAGACCAGCTGCTCCAGCAAACCATCTGTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000047970.14
ENSMUST00000095261.10
ENSMUST00000167360.8
CDS CAA 72 bp TTAACCCGTGCATCCTTGTGCCGTAGCATCTCCTGGTaGCTGGCCATGATTCGGGTGGCAATCACTTTGTTG +
Preference number: 6 (lower is better)
Translates to: LTRASLCRSISW*LAMIRVAITLL
Trigger: CAACAAAGTGATTGCCACCCGAATCATGGCCAGCAACCAGGAGATGCTACGGCACAAGGATGCACGGGTTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000047970.14
ENSMUST00000095261.10
ENSMUST00000167360.8
ENSMUST00000171584.2
CDS CAA 90 bp CAAGCCTTCACTCGGTCCCCCAGAGCCTGCTCCCACCTGAAGAATTaGATGACTCGAATGCCACTCAGTAACTCTGTCATGAGCTTAACC +
Preference number: 6 (lower is better)
Translates to: QAFTRSPRACSHLKN*MTRMPLSNSVMSLT
Trigger: GGTTAAGCTCATGACAGAGTTACTGAGTGGCATTCGAGTCATCAAATTCTTCAGGTGGGAGCAGGCTCTGGGGGACCGAGTGAAGGCTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000047970.14
ENSMUST00000095261.10
ENSMUST00000167360.8
CDS CCA 72 bp TGGTCAGCACTGTCTTGTTGGCAAAGCGTTTACAGATaGTTTGCTGGAGCAGCTGGTCTGTCTTCTGGTCCA +
Preference number: 6 (lower is better)
Translates to: WSALSCWQSVYR*FAGAAGLSSGP
Trigger: TGGACCAGAAGACAGACCAGCTGCTCCAGCAAACCATCTGTAAACGCTTTGCCAACAAGACAGTGCTGACCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000047970.14
ENSMUST00000095261.10
ENSMUST00000167360.8
CDS CAA 72 bp CTCAGTAACTCTGTCATGAGCTTAACCCGTGCATCCTaGTGCCGTAGCATCTCCTGGTTGCTGGCCATGATT +
Preference number: 6 (lower is better)
Translates to: LSNSVMSLTRAS*CRSISWLLAMI
Trigger: AATCATGGCCAGCAACCAGGAGATGCTACGGCACAAGGATGCACGGGTTAAGCTCATGACAGAGTTACTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000047970.14
ENSMUST00000095261.10
ENSMUST00000167360.8