Pregenerated sensors for ABCB6 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026198Ensembl transcript IDs: ENSMUST00000027396.15, ENSMUST00000161215.2
Found 128 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | CTCACGATGCTTTCTGGAAGGTCCCTTTTCCTTACAATAGCTAGCACCAAACTCTACACCAGGATGAAATaGAGGCAAGAGAGGGGACAT | + |
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Preference number: 2 (lower is better) Translates to: LTMLSGRSLFLTIASTKLYTRMK*RQERGH Trigger: ATGTCCCCTCTCTTGCCTTCATTTCATCCTGGTGTA...GAGTTTGGTGCTAGCTATTGTAAGGAAAAGGGACCTTCCAGAAAGCATCGTGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027396.15 |
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| CDS-3UTR CCA 90 bp | ACAATAGCTAGCACCAAACTCCTACACCAGGATGAAATGAAGGCAAGAGAGGGGGGCCCAGATCTGCTCTaGCCCACCACCACTGCGGGC | + |
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Preference number: 4 (lower is better) Translates to: TIASTKLLHQDEMKAREGGPDLL*PTTTAG Trigger: GCCCGCAGTGGTGGTGGGCCAGAGCAGATCTGGGCC...CCCCTCTCTTGCCTTCATTTCATCCTGGTGTAGGAGTTTGGTGCTAGCTATTGT 57% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000027396.15 |
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| CDS-3UTR GCA 90 bp | TTGCGCAGGCCATTTATTTCCTCACGATGCTTTCTGGAAGGTCCCTTTTCCTTAGCACCTCCCGACGCCTaGGGGGAAGAACCAGCACCA | + |
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Preference number: 4 (lower is better) Translates to: LRRPFISSRCFLEGPFSLAPPDA*GEEPAP Trigger: TGGTGCTGGTTCTTCCCCGCAGGCGTCGGGAGGTGC...TAAGGAAAAGGGACCTTCCAGAAAGCATCGTGAGGAAATAAATGGCCTGCGCAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027396.15 |
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| CDS-3UTR CCA 90 bp | GGGGACATATCTTTTTCTCCTGAGTTCGCCTTTGGAAGGAAAGAGGTCCCTTTTCAGCTGCAGCACATATaGGGCCACCCGAGGGCCAGC | + |
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Preference number: 4 (lower is better) Translates to: GDISFSPEFAFGRKEVPFQLQHI*GHPRAS Trigger: GCTGGCCCTCGGGTGGCCCCATATGTGCTGCAGCTG...AAAAGGGACCTCTTTCCTTCCAAAGGCGAACTCAGGAGAAAAAGATATGTCCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000027396.15 |
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| CDS-3UTR CCA 90 bp | AGAGGGGACATATCTTTTTCTCCTGAGTTCGCCTTTGGAAGGAAAGAGGTCCCTAGACTCTGCCGTGCCTaGCTCCGTTCCACCACGAGC | + |
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Preference number: 4 (lower is better) Translates to: RGDISFSPEFAFGRKEVPRLCRA*LRSTTS Trigger: GCTCGTGGTGGAACGGAGCCAGGCACGGCAGAGTCT...AGGGACCTCTTTCCTTCCAAAGGCGAACTCAGGAGAAAAAGATATGTCCCCTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027396.15 |
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| CDS-3UTR GCA 90 bp | GGAAGGTCCCTTTTCCTTACAATAGCTAGCACCAAACTCCTACACCAGGATGAAGTACGCCGGCCCAGGTaGCAGCGCAGTGAGAGTTCA | + |
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Preference number: 4 (lower is better) Translates to: GRSLFLTIASTKLLHQDEVRRPR*QRSESS Trigger: TGAACTCTCACTGCGCTGGCACCTGGGCCGGCGTAC...TTCATCCTGGTGTAGGAGTTTGGTGCTAGCTATTGTAAGGAAAAGGGACCTTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027396.15 |
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| CDS-3UTR CCA 90 bp | ATGCTTTCTGGAAGGTCCCTTTTCCTTACAATAGCTAGCACCAAACTCCTACACCTGGGGGCGAAGTCCTaGGGCCCAGAGCCCCAAGAT | + |
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Preference number: 4 (lower is better) Translates to: MLSGRSLFLTIASTKLLHLGAKS*GPEPQD Trigger: ATCTTGGGGCTCTGGGCCCCAGGACTTCGCCCCCAG...GTGTAGGAGTTTGGTGCTAGCTATTGTAAGGAAAAGGGACCTTCCAGAAAGCAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000027396.15 |
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| CDS-3UTR CCA 90 bp | ATGCTTTCTGGAAGGTCCCTTTTCCTTACAATAGCTAGCACCAAACTCCTACACGGATGGTGCGGGCGATaGCCACTCGCTGCTTCTCGC | + |
|
Preference number: 4 (lower is better) Translates to: MLSGRSLFLTIASTKLLHGWCGR*PLAASR Trigger: GCGAGAAGCAGCGAGTGGCCATCGCCCGCACCATCC...GTGTAGGAGTTTGGTGCTAGCTATTGTAAGGAAAAGGGACCTTCCAGAAAGCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027396.15 |
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| CDS-3UTR TCA 90 bp | ACAATAGCTAGCACCAAACTCCTACACCAGGATGAAATGAAGGCAAGAGAGGGGAGGGGCAGTGCCATCTaGAGTGTGGCCAGAAACAGC | + |
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Preference number: 4 (lower is better) Translates to: TIASTKLLHQDEMKAREGRGSAI*SVARNS Trigger: GCTGTTTCTGGCCACACTTCAGATGGCACTGCCCCT...CCCCTCTCTTGCCTTCATTTCATCCTGGTGTAGGAGTTTGGTGCTAGCTATTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027396.15 |
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| CDS-3UTR TCA 90 bp | ACAATAGCTAGCACCAAACTCCTACACCAGGATGAAATGAAGGCAAGAGAGGGGCAGGTGCCAGCGCAGTaGGAGTTCATGCAGGTGAGA | + |
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Preference number: 4 (lower is better) Translates to: TIASTKLLHQDEMKAREGQVPAQ*EFMQVR Trigger: TCTCACCTGCATGAACTCTCACTGCGCTGGCACCTG...CCCCTCTCTTGCCTTCATTTCATCCTGGTGTAGGAGTTTGGTGCTAGCTATTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027396.15 |
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| CDS-3UTR GCA 90 bp | CTTACAATAGCTAGCACCAAACTCCTACACCAGGATGAAATGAAGGCAAGAGAGCCCATTGCCAGACTCTaGCGTGCCTGGCTCCGTTCC | + |
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Preference number: 4 (lower is better) Translates to: LTIASTKLLHQDEMKAREPIARL*RAWLRS Trigger: GGAACGGAGCCAGGCACGGCAGAGTCTGGCAATGGG...CTCTCTTGCCTTCATTTCATCCTGGTGTAGGAGTTTGGTGCTAGCTATTGTAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027396.15 |
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| CDS-3UTR GCA 90 bp | AGAGGGGACATATCTTTTTCTCCTGAGTTCGCCTTTGGAAGGAAAGAGGTCCCTTGGTGGTGCGGTTGGTaGAGACTTTGGCCAGAGAGG | + |
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Preference number: 4 (lower is better) Translates to: RGDISFSPEFAFGRKEVPWWCGW*RLWPER Trigger: CCTCTCTGGCCAAAGTCTGCACCAACCGCACCACCA...AGGGACCTCTTTCCTTCCAAAGGCGAACTCAGGAGAAAAAGATATGTCCCCTCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027396.15 |
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| CDS-3UTR TCA 90 bp | ACAATAGCTAGCACCAAACTCCTACACCAGGATGAAATGAAGGCAAGAGAGGGGTGGGGACCAACACATTaGGTGCTCGTTCCAACCCCA | + |
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Preference number: 4 (lower is better) Translates to: TIASTKLLHQDEMKAREGWGPTH*VLVPTP Trigger: TGGGGTTGGAACGAGCACTCAATGTGTTGGTCCCCA...CCCCTCTCTTGCCTTCATTTCATCCTGGTGTAGGAGTTTGGTGCTAGCTATTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027396.15 |
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| CDS-3UTR TCA 90 bp | GGGGACATATCTTTTTCTCCTGAGTTCGCCTTTGGAAGGAAAGAGGTCCCTTTTAGAGCCTGTGTGCTATaGCGATGGTGGTGCGGTTGG | + |
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Preference number: 4 (lower is better) Translates to: GDISFSPEFAFGRKEVPFRACVL*RWWCGW Trigger: CCAACCGCACCACCATCGTCATAGCACACAGGCTCT...AAAAGGGACCTCTTTCCTTCCAAAGGCGAACTCAGGAGAAAAAGATATGTCCCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000027396.15 ENSMUST00000161215.2 |
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| CDS-3UTR GCA 90 bp | CTCACGATGCTTTCTGGAAGGTCCCTTTTCCTTACAATAGCTAGCACCAAACTCGTGGCCAGAAACAGCTaGAGCACATATGGGGCCACC | + |
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Preference number: 4 (lower is better) Translates to: LTMLSGRSLFLTIASTKLVARNS*STYGAT Trigger: GGTGGCCCCATATGTGCTGCAGCTGTTTCTGGCCAC...GAGTTTGGTGCTAGCTATTGTAAGGAAAAGGGACCTTCCAGAAAGCATCGTGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027396.15 |
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| CDS-3UTR GCA 90 bp | TTGCGCAGGCCATTTATTTCCTCACGATGCTTTCTGGAAGGTCCCTTTTCCTTACCTCGGGACGTAAACTaGTGCACCCGGATCCATAGG | + |
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Preference number: 4 (lower is better) Translates to: LRRPFISSRCFLEGPFSLPRDVN*CTRIHR Trigger: CCTATGGATCCGGGTGCAGCAGTTTACGTCCCGAGG...TAAGGAAAAGGGACCTTCCAGAAAGCATCGTGAGGAAATAAATGGCCTGCGCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027396.15 |
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| CDS-3UTR GCA 90 bp | TTGCGCAGGCCATTTATTTCCTCACGATGCTTTCTGGAAGGTCCCTTTTCCTTAGGCATCATGAATGCCTaGAGCCTGAGCAGCAGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: LRRPFISSRCFLEGPFSLGIMNA*SLSSSL Trigger: GAGGCTGCTGCTCAGGCTGCAGGCATTCATGATGCC...TAAGGAAAAGGGACCTTCCAGAAAGCATCGTGAGGAAATAAATGGCCTGCGCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027396.15 |
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| CDS-3UTR CCA 90 bp | CTTTTCCTTACAATAGCTAGCACCAAACTCCTACACCAGGATGAAATGAAGGCACCAAGACAGCTCTTCTaGGCCAGCAGGCACCTCCCG | + |
|
Preference number: 4 (lower is better) Translates to: LFLTIASTKLLHQDEMKAPRQLF*ASRHLP Trigger: CGGGAGGTGCCTGCTGGCCCAGAAGAGCTGTCTTGG...TGCCTTCATTTCATCCTGGTGTAGGAGTTTGGTGCTAGCTATTGTAAGGAAAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027396.15 |
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| CDS-3UTR CCA 90 bp | GGAAGGTCCCTTTTCCTTACAATAGCTAGCACCAAACTCCTACACCAGGATGAAACAAGCCACAGACGCTaGCCAGACTCTCCAGCACAG | + |
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Preference number: 4 (lower is better) Translates to: GRSLFLTIASTKLLHQDETSHRR*PDSPAQ Trigger: CTGTGCTGGAGAGTCTGGCCAGCGTCTGTGGCTTGT...TTCATCCTGGTGTAGGAGTTTGGTGCTAGCTATTGTAAGGAAAAGGGACCTTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027396.15 |
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| CDS-3UTR CCA 90 bp | TTGCGCAGGCCATTTATTTCCTCACGATGCTTTCTGGAAGGTCCCTTTTCCTTAGGTTGGTGCAGACTTTaGCCAGAGAGGCCTGGATGG | + |
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Preference number: 4 (lower is better) Translates to: LRRPFISSRCFLEGPFSLGWCRL*PERPGW Trigger: CCATCCAGGCCTCTCTGGCCAAAGTCTGCACCAACC...TAAGGAAAAGGGACCTTCCAGAAAGCATCGTGAGGAAATAAATGGCCTGCGCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027396.15 |
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| CDS-3UTR CCA 90 bp | GAGGGGACATATCTTTTTCTCCTGAGTTCGCCTTTGGAAGGAAAGAGGTCCCTTCGATGGTGGTGCGGTTaGTGCAGACTTCAGGGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: EGTYLFLLSSPLEGKRSLRWWCG*CRLQGK Trigger: CTTTCCCTGAAGTCTGCACCAACCGCACCACCATCG...AAGGGACCTCTTTCCTTCCAAAGGCGAACTCAGGAGAAAAAGATATGTCCCCTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000161215.2 |
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| CDS-3UTR TCA 90 bp | CTCACGATGCTTTCTGGAAGGTCCCTTTTCCTTACAATAGCTAGCACCAAACTCACCCACAGGCCAAATTaGACCTGCTGGCCCAGATCT | + |
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Preference number: 4 (lower is better) Translates to: LTMLSGRSLFLTIASTKLTHRPN*TCWPRS Trigger: AGATCTGGGCCAGCAGGTTCAATTTGGCCTGTGGGT...GAGTTTGGTGCTAGCTATTGTAAGGAAAAGGGACCTTCCAGAAAGCATCGTGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027396.15 |
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| CDS-3UTR TCA 90 bp | CTTACAATAGCTAGCACCAAACTCCTACACCAGGATGAAATGAAGGCAAGAGAGAGAGCCTGTGTGCTATaGCGATGGTGGTGCGGTTGG | + |
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Preference number: 4 (lower is better) Translates to: LTIASTKLLHQDEMKARERACVL*RWWCGW Trigger: CCAACCGCACCACCATCGTCATAGCACACAGGCTCT...CTCTCTTGCCTTCATTTCATCCTGGTGTAGGAGTTTGGTGCTAGCTATTGTAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027396.15 ENSMUST00000161215.2 |
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| CDS-3UTR GCA 90 bp | CTTTTCCTTACAATAGCTAGCACCAAACTCCTACACCAGGATGAAATGAAGGCACATCCAGACGCCCATTaGCAGACTCTGCCGTGCCTG | + |
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Preference number: 4 (lower is better) Translates to: LFLTIASTKLLHQDEMKAHPDAH*QTLPCL Trigger: CAGGCACGGCAGAGTCTGGCAATGGGCGTCTGGATG...TGCCTTCATTTCATCCTGGTGTAGGAGTTTGGTGCTAGCTATTGTAAGGAAAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027396.15 |
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| CDS-3UTR GCA 90 bp | GGGGACATATCTTTTTCTCCTGAGTTCGCCTTTGGAAGGAAAGAGGTCCCTTTTCGGGACGTAAACTGCTaGACCCGGATCCATAGGAAG | + |
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Preference number: 4 (lower is better) Translates to: GDISFSPEFAFGRKEVPFRDVNC*TRIHRK Trigger: CTTCCTATGGATCCGGGTGCAGCAGTTTACGTCCCG...AAAAGGGACCTCTTTCCTTCCAAAGGCGAACTCAGGAGAAAAAGATATGTCCCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000027396.15 |
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| CDS-3UTR GCA 90 bp | TTCCTTACAATAGCTAGCACCAAACTCCTACACCAGGATGAAATGAAGGCAAGAGAGCAGAGAGTCTACTaGTCGTGCCCGGGTGGCGTT | + |
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Preference number: 4 (lower is better) Translates to: FLTIASTKLLHQDEMKAREQRVY*SCPGGV Trigger: AACGCCACCCGGGCACGAGCAGTAGACTCTCTGCTC...TCTTGCCTTCATTTCATCCTGGTGTAGGAGTTTGGTGCTAGCTATTGTAAGGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027396.15 |
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| CDS-3UTR CCA 90 bp | ATGCTTTCTGGAAGGTCCCTTTTCCTTACAATAGCTAGCACCAAACTCCTACACCTGCTCGTGCCCGGGTaGCGTTTTCCTGTGTGTTCA | + |
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Preference number: 4 (lower is better) Translates to: MLSGRSLFLTIASTKLLHLLVPG*RFPVCS Trigger: TGAACACACAGGAAAACGCCACCCGGGCACGAGCAG...GTGTAGGAGTTTGGTGCTAGCTATTGTAAGGAAAAGGGACCTTCCAGAAAGCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027396.15 |
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| CDS-3UTR TCA 90 bp | ACAATAGCTAGCACCAAACTCCTACACCAGGATGAAATGAAGGCAAGAGAGGGGGTAGCTTCTGCTCACTaGCGAAGTATGCGCAAAGCA | + |
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Preference number: 4 (lower is better) Translates to: TIASTKLLHQDEMKAREGVASAH*RSMRKA Trigger: TGCTTTGCGCATACTTCGTCAGTGAGCAGAAGCTAC...CCCCTCTCTTGCCTTCATTTCATCCTGGTGTAGGAGTTTGGTGCTAGCTATTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027396.15 |
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| CDS-3UTR TCA 90 bp | GGAAGGTCCCTTTTCCTTACAATAGCTAGCACCAAACTCCTACACCAGGATGAAAGATGTATCCAGTGCTaGTGTGGCCTCATCCAGCAG | + |
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Preference number: 4 (lower is better) Translates to: GRSLFLTIASTKLLHQDERCIQC*CGLIQQ Trigger: CTGCTGGATGAGGCCACATCAGCACTGGATACATCT...TTCATCCTGGTGTAGGAGTTTGGTGCTAGCTATTGTAAGGAAAAGGGACCTTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027396.15 |
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| CDS-3UTR TCA 90 bp | AGAGGGGACATATCTTTTTCTCCTGAGTTCGCCTTTGGAAGGAAAGAGGTCCCTGAATCTGGTCAGCATTaGCCACAGTTGAGAGCCTGT | + |
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Preference number: 4 (lower is better) Translates to: RGDISFSPEFAFGRKEVPESGQH*PQLRAC Trigger: ACAGGCTCTCAACTGTGGTCAATGCTGACCAGATTC...AGGGACCTCTTTCCTTCCAAAGGCGAACTCAGGAGAAAAAGATATGTCCCCTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027396.15 ENSMUST00000161215.2 |
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| CDS-3UTR GCA 90 bp | GACATATCTTTTTCTCCTGAGTTCGCCTTTGGAAGGAAAGAGGTCCCTTTTATTACCAGCCAGGGGCAGTaGCATCTGAAGTGTGGCCAG | + |
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Preference number: 4 (lower is better) Translates to: DISFSPEFAFGRKEVPFITSQGQ*HLKCGQ Trigger: CTGGCCACACTTCAGATGGCACTGCCCCTGGCTGGT...AATAAAAGGGACCTCTTTCCTTCCAAAGGCGAACTCAGGAGAAAAAGATATGTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000027396.15 |
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| CDS-3UTR GCA 90 bp | TTGCGCAGGCCATTTATTTCCTCACGATGCTTTCTGGAAGGTCCCTTTTCCTTAGGCCAAGTTCTCGGCTaGAAATGTCACAGTCCAGAG | + |
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Preference number: 4 (lower is better) Translates to: LRRPFISSRCFLEGPFSLGQVLG*KCHSPE Trigger: CTCTGGACTGTGACATTTGCAGCCGAGAACTTGGCC...TAAGGAAAAGGGACCTTCCAGAAAGCATCGTGAGGAAATAAATGGCCTGCGCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027396.15 |
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| CDS-3UTR GCA 90 bp | ACAATAGCTAGCACCAAACTCCTACACCAGGATGAAATGAAGGCAAGAGAGGGGGACCAACACATTGAGTaGTCGTTCCAACCCCATGAG | + |
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Preference number: 4 (lower is better) Translates to: TIASTKLLHQDEMKAREGDQHIE*SFQPHE Trigger: CTCATGGGGTTGGAACGAGCACTCAATGTGTTGGTC...CCCCTCTCTTGCCTTCATTTCATCCTGGTGTAGGAGTTTGGTGCTAGCTATTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027396.15 |
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| CDS-3UTR GCA 90 bp | ACAATAGCTAGCACCAAACTCCTACACCAGGATGAAATGAAGGCAAGAGAGGGGCCAACCTGTAGCTTCTaGTCACTGACGAAGTATGCG | + |
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Preference number: 4 (lower is better) Translates to: TIASTKLLHQDEMKAREGPTCSF*SLTKYA Trigger: CGCATACTTCGTCAGTGAGCAGAAGCTACAGGTTGG...CCCCTCTCTTGCCTTCATTTCATCCTGGTGTAGGAGTTTGGTGCTAGCTATTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027396.15 |
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| CDS-3UTR GCA 90 bp | GGAAGGTCCCTTTTCCTTACAATAGCTAGCACCAAACTCCTACACCAGGATGAAAAAACGAAGGGGCCCTaGACCAGGAACATCCTTCAC | + |
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Preference number: 4 (lower is better) Translates to: GRSLFLTIASTKLLHQDEKTKGP*TRNILH Trigger: GTGAAGGATGTTCCTGGTGCAGGGCCCCTTCGTTTT...TTCATCCTGGTGTAGGAGTTTGGTGCTAGCTATTGTAAGGAAAAGGGACCTTCC 49% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000027396.15 |
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| CDS-3UTR GCA 90 bp | TTCCTTACAATAGCTAGCACCAAACTCCTACACCAGGATGAAATGAAGGCAAGAGGCATCATGAATGCCTaGAGCCTGAGCAGCAGCCTC | + |
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Preference number: 4 (lower is better) Translates to: FLTIASTKLLHQDEMKARGIMNA*SLSSSL Trigger: GAGGCTGCTGCTCAGGCTGCAGGCATTCATGATGCC...TCTTGCCTTCATTTCATCCTGGTGTAGGAGTTTGGTGCTAGCTATTGTAAGGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027396.15 ENSMUST00000161215.2 |
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| CDS-3UTR GCA 90 bp | CTCACGATGCTTTCTGGAAGGTCCCTTTTCCTTACAATAGCTAGCACCAAACTCAGATGGCATCATGAATaGCTGCAGCCTGAGCAGCAG | + |
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Preference number: 4 (lower is better) Translates to: LTMLSGRSLFLTIASTKLRWHHE*LQPEQQ Trigger: CTGCTGCTCAGGCTGCAGGCATTCATGATGCCATCT...GAGTTTGGTGCTAGCTATTGTAAGGAAAAGGGACCTTCCAGAAAGCATCGTGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027396.15 |
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| CDS-3UTR GCA 90 bp | GGGGACATATCTTTTTCTCCTGAGTTCGCCTTTGGAAGGAAAGAGGTCCCTTTTAGATGGCATCATGAATaGCTGCAGCCTGAGCAGCAG | + |
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Preference number: 4 (lower is better) Translates to: GDISFSPEFAFGRKEVPFRWHHE*LQPEQQ Trigger: CTGCTGCTCAGGCTGCAGGCATTCATGATGCCATCT...AAAAGGGACCTCTTTCCTTCCAAAGGCGAACTCAGGAGAAAAAGATATGTCCCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000027396.15 ENSMUST00000161215.2 |
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| CDS-3UTR CCA 90 bp | TTCCTTACAATAGCTAGCACCAAACTCCTACACCAGGATGAAATGAAGGCAAGACGATGGTGGTGCGGTTaGTGCAGACTTTGGCCAGAG | + |
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Preference number: 4 (lower is better) Translates to: FLTIASTKLLHQDEMKARRWWCG*CRLWPE Trigger: CTCTGGCCAAAGTCTGCACCAACCGCACCACCATCG...TCTTGCCTTCATTTCATCCTGGTGTAGGAGTTTGGTGCTAGCTATTGTAAGGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027396.15 |
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| CDS-3UTR TCA 90 bp | TTCCTTACAATAGCTAGCACCAAACTCCTACACCAGGATGAAATGAAGGCAAGATCGAGGGCACTAGCGTaGAGAAGAAGCAGGGACTCA | + |
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Preference number: 4 (lower is better) Translates to: FLTIASTKLLHQDEMKARSRALA*RRSRDS Trigger: TGAGTCCCTGCTTCTTCTTCACGCTAGTGCCCTCGA...TCTTGCCTTCATTTCATCCTGGTGTAGGAGTTTGGTGCTAGCTATTGTAAGGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027396.15 |
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| CDS-3UTR TCA 90 bp | CTTACAATAGCTAGCACCAAACTCCTACACCAGGATGAAATGAAGGCAAGAGAGGAGAGTTCATGCAGGTaGGAGAAGAGACGTAGCTCC | + |
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Preference number: 4 (lower is better) Translates to: LTIASTKLLHQDEMKAREESSCR*EKRRSS Trigger: GGAGCTACGTCTCTTCTCTCACCTGCATGAACTCTC...CTCTCTTGCCTTCATTTCATCCTGGTGTAGGAGTTTGGTGCTAGCTATTGTAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027396.15 |
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| CDS-3UTR TCA 90 bp | CTTACAATAGCTAGCACCAAACTCCTACACCAGGATGAAATGAAGGCAAGAGAGAGGTGCCAAACCAGTTaGGAGGCATGTACAGTTGGG | + |
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Preference number: 4 (lower is better) Translates to: LTIASTKLLHQDEMKARERCQTS*EACTVG Trigger: CCCAACTGTACATGCCTCTCAACTGGTTTGGCACCT...CTCTCTTGCCTTCATTTCATCCTGGTGTAGGAGTTTGGTGCTAGCTATTGTAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027396.15 |
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| CDS-3UTR TCA 90 bp | TTCCTTACAATAGCTAGCACCAAACTCCTACACCAGGATGAAATGAAGGCAAGATCAATCCGGCCCTTATaGAAACGAAGGGGCCCTGCA | + |
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Preference number: 4 (lower is better) Translates to: FLTIASTKLLHQDEMKARSIRPL*KRRGPA Trigger: TGCAGGGCCCCTTCGTTTTCATAAGGGCCGGATTGA...TCTTGCCTTCATTTCATCCTGGTGTAGGAGTTTGGTGCTAGCTATTGTAAGGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027396.15 |
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| CDS-3UTR TCA 90 bp | GGGGACATATCTTTTTCTCCTGAGTTCGCCTTTGGAAGGAAAGAGGTCCCTTTTGTCCAGGCATCACAGTaGAGGACACATCTTGTAAGG | + |
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Preference number: 4 (lower is better) Translates to: GDISFSPEFAFGRKEVPFVQASQ*RTHLVR Trigger: CCTTACAAGATGTGTCCTTCACTGTGATGCCTGGAC...AAAAGGGACCTCTTTCCTTCCAAAGGCGAACTCAGGAGAAAAAGATATGTCCCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000027396.15 |
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| CDS-3UTR TCA 90 bp | GGGGACATATCTTTTTCTCCTGAGTTCGCCTTTGGAAGGAAAGAGGTCCCTTTTAGCATTGACCACAGTTaGGAGCCTGTGTGCTATGAC | + |
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Preference number: 4 (lower is better) Translates to: GDISFSPEFAFGRKEVPFSIDHS*EPVCYD Trigger: GTCATAGCACACAGGCTCTCAACTGTGGTCAATGCT...AAAAGGGACCTCTTTCCTTCCAAAGGCGAACTCAGGAGAAAAAGATATGTCCCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000027396.15 ENSMUST00000161215.2 |
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| CDS-3UTR TCA 90 bp | CTCACGATGCTTTCTGGAAGGTCCCTTTTCCTTACAATAGCTAGCACCAAACTCGAATCTGGTCAGCATTaGCCACAGTTGAGAGCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: LTMLSGRSLFLTIASTKLESGQH*PQLRAC Trigger: ACAGGCTCTCAACTGTGGTCAATGCTGACCAGATTC...GAGTTTGGTGCTAGCTATTGTAAGGAAAAGGGACCTTCCAGAAAGCATCGTGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027396.15 |
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| CDS-3UTR GCA 90 bp | GGAAGGTCCCTTTTCCTTACAATAGCTAGCACCAAACTCCTACACCAGGATGAAAATTGTGCTCTTTCCTaGCCCAGATGGACCTACCAG | + |
|
Preference number: 4 (lower is better) Translates to: GRSLFLTIASTKLLHQDENCALS*PRWTYQ Trigger: CTGGTAGGTCCATCTGGGGCAGGAAAGAGCACAATT...TTCATCCTGGTGTAGGAGTTTGGTGCTAGCTATTGTAAGGAAAAGGGACCTTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027396.15 |
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| CDS-3UTR GCA 90 bp | ATGCTTTCTGGAAGGTCCCTTTTCCTTACAATAGCTAGCACCAAACTCCTACACGCAGGCGCAAAATTGTaGTCTTTCCTGCCCCAGATG | + |
|
Preference number: 4 (lower is better) Translates to: MLSGRSLFLTIASTKLLHAGAKL*SFLPQM Trigger: CATCTGGGGCAGGAAAGAGCACAATTTTGCGCCTGC...GTGTAGGAGTTTGGTGCTAGCTATTGTAAGGAAAAGGGACCTTCCAGAAAGCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027396.15 |
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| CDS-3UTR GCA 90 bp | GGGACATATCTTTTTCTCCTGAGTTCGCCTTTGGAAGGAAAGAGGTCCCTTTTATGGTGGTGCGGTTGGTaGAGACTTCAGGGAAAGACA | + |
|
Preference number: 4 (lower is better) Translates to: GTYLFLLSSPLEGKRSLLWWCGW*RLQGKT Trigger: TGTCTTTCCCTGAAGTCTGCACCAACCGCACCACCA...TAAAAGGGACCTCTTTCCTTCCAAAGGCGAACTCAGGAGAAAAAGATATGTCCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000161215.2 |
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| CDS-3UTR CCA 90 bp | GGGGACATATCTTTTTCTCCTGAGTTCGCCTTTGGAAGGAAAGAGGTCCCTTTTTTGGCCAGAGAGGCCTaGATGGCTCTCTCATTAGAT | + |
|
Preference number: 4 (lower is better) Translates to: GDISFSPEFAFGRKEVPFLAREA*MALSLD Trigger: ATCTAATGAGAGAGCCATCCAGGCCTCTCTGGCCAA...AAAAGGGACCTCTTTCCTTCCAAAGGCGAACTCAGGAGAAAAAGATATGTCCCC 48% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000027396.15 |
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| CDS-3UTR TCA 90 bp | GGAAGGTCCCTTTTCCTTACAATAGCTAGCACCAAACTCCTACACCAGGATGAAGGATGCAGCCAGAGCTaGTGTCATAGAAGCGAAATA | + |
|
Preference number: 4 (lower is better) Translates to: GRSLFLTIASTKLLHQDEGCSQS*CHRSEI Trigger: TATTTCGCTTCTATGACATCAGCTCTGGCTGCATCC...TTCATCCTGGTGTAGGAGTTTGGTGCTAGCTATTGTAAGGAAAAGGGACCTTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027396.15 |
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| CDS-3UTR TCA 90 bp | CTTTTCCTTACAATAGCTAGCACCAAACTCCTACACCAGGATGAAATGAAGGCAGGCACAACTCCAATGTaGGATCGGAGAGAGATCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LFLTIASTKLLHQDEMKAGTTPM*DRREIW Trigger: CCAGATCTCTCTCCGATCTCACATTGGAGTTGTGCC...TGCCTTCATTTCATCCTGGTGTAGGAGTTTGGTGCTAGCTATTGTAAGGAAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027396.15 |
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| CDS-3UTR CCA 90 bp | GAGGGGACATATCTTTTTCTCCTGAGTTCGCCTTTGGAAGGAAAGAGGTCCCTTTTGATGACCAGAATCTaGTCAGCATTGACCACAGTT | + |
|
Preference number: 4 (lower is better) Translates to: EGTYLFLLSSPLEGKRSLLMTRI*SALTTV Trigger: AACTGTGGTCAATGCTGACCAGATTCTGGTCATCAA...AAGGGACCTCTTTCCTTCCAAAGGCGAACTCAGGAGAAAAAGATATGTCCCCTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000027396.15 ENSMUST00000161215.2 |
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| CDS-3UTR TCA 90 bp | GACATATCTTTTTCTCCTGAGTTCGCCTTTGGAAGGAAAGAGGTCCCTTTTATTACCAGGTTCTGTGTCTaGTTCAGCACAACCAGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: DISFSPEFAFGRKEVPFITRFCV*FSTTSE Trigger: CTCACTGGTTGTGCTGAATCAGACACAGAACCTGGT...AATAAAAGGGACCTCTTTCCTTCCAAAGGCGAACTCAGGAGAAAAAGATATGTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027396.15 |
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| CDS-3UTR TCA 90 bp | GACATATCTTTTTCTCCTGAGTTCGCCTTTGGAAGGAAAGAGGTCCCTTTTATTAGCATTGACCACAGTTaGGAGCCTGTGTGCTATGAC | + |
|
Preference number: 4 (lower is better) Translates to: DISFSPEFAFGRKEVPFISIDHS*EPVCYD Trigger: GTCATAGCACACAGGCTCTCAACTGTGGTCAATGCT...AATAAAAGGGACCTCTTTCCTTCCAAAGGCGAACTCAGGAGAAAAAGATATGTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027396.15 ENSMUST00000161215.2 |
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| CDS-3UTR CCA 90 bp | TTCCTTACAATAGCTAGCACCAAACTCCTACACCAGGATGAAATGAAGGCAAGACAGGGAAAGACAAGATaGCATCATGAATGCCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: FLTIASTKLLHQDEMKARQGKTR*HHECLQ Trigger: CTGCAGGCATTCATGATGCCATCTTGTCTTTCCCTG...TCTTGCCTTCATTTCATCCTGGTGTAGGAGTTTGGTGCTAGCTATTGTAAGGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027396.15 ENSMUST00000161215.2 |
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| CDS-3UTR CCA 90 bp | CTTTTCCTTACAATAGCTAGCACCAAACTCCTACACCAGGATGAAATGAAGGCACAGGGAAAGACAAGATaGCATCATGAATGCCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LFLTIASTKLLHQDEMKAQGKTR*HHECLQ Trigger: CTGCAGGCATTCATGATGCCATCTTGTCTTTCCCTG...TGCCTTCATTTCATCCTGGTGTAGGAGTTTGGTGCTAGCTATTGTAAGGAAAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027396.15 ENSMUST00000161215.2 |
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| CDS-3UTR CCA 90 bp | GACATATCTTTTTCTCCTGAGTTCGCCTTTGGAAGGAAAGAGGTCCCTTTTATTTTGATGACCAGAATCTaGTCAGCATTGACCACAGTT | + |
|
Preference number: 4 (lower is better) Translates to: DISFSPEFAFGRKEVPFILMTRI*SALTTV Trigger: AACTGTGGTCAATGCTGACCAGATTCTGGTCATCAA...AATAAAAGGGACCTCTTTCCTTCCAAAGGCGAACTCAGGAGAAAAAGATATGTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000027396.15 ENSMUST00000161215.2 |
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| CDS CCA 90 bp | CACATATGGGGCCACCCGAGGGCCAGCCGCCCAAGACAGCTCTTCTaGGCCAGCAGGCACCTCCCGACGCCTGCGGGGAAGAACCAGCAC | + |
|
Preference number: 5 (lower is better) Translates to: HIWGHPRASRPRQLF*ASRHLPTPAGKNQH Trigger: GTGCTGGTTCTTCCCCGCAGGCGTCGGGAGGTGCCTGCTGGCCCAGAAGAGCTGTCTTGGGCGGCTGGCCCTCGGGTGGCCCCATATGTG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027396.15 |
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| CDS CCA 90 bp | GGGCAGTGCCATCTGAAGTGTGGCCAGAAACAGCTGCAGCACATATaGGGCCACCCGAGGGCCAGCCGCCCAAGACAGCTCTTCTGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: GQCHLKCGQKQLQHI*GHPRASRPRQLFWA Trigger: GGCCCAGAAGAGCTGTCTTGGGCGGCTGGCCCTCGGGTGGCCCCATATGTGCTGCAGCTGTTTCTGGCCACACTTCAGATGGCACTGCCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027396.15 |
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| CDS CCA 90 bp | GTGCCTGGCTCCGTTCCACCACGAGCAGCCACAAGCCACAGACGCTaGCCAGACTCTCCAGCACAGAAGCCAGCAGTAGGTAGCCTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: VPGSVPPRAATSHRR*PDSPAQKPAVGSLA Trigger: TGCCAGGCTACCTACTGCTGGCTTCTGTGCTGGAGAGTCTGGCCAGCGTCTGTGGCTTGTGGCTGCTCGTGGTGGAACGGAGCCAGGCAC 63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027396.15 |
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| CDS CCA 90 bp | TGCCTGAACTTCATCCAGACGCCCATTGCCAGACTCTGCCGTGCCTaGCTCCGTTCCACCACGAGCAGCCACAAGCCACAGACGCTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: CLNFIQTPIARLCRA*LRSTTSSHKPQTLA Trigger: GGCCAGCGTCTGTGGCTTGTGGCTGCTCGTGGTGGAACGGAGCCAGGCACGGCAGAGTCTGGCAATGGGCGTCTGGATGAAGTTCAGGCA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027396.15 |
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| CDS GCA 90 bp | ATGATGTCAGGAGCCTTAAGGATGGTGCGGGCGATGGCCACTCGCTaGTTCTCGCCACCACTCAGCTTCAGACCCCGCTCCCCGACCTGT | + |
|
Preference number: 5 (lower is better) Translates to: MMSGALRMVRAMATR*FSPPLSFRPRSPTC Trigger: ACAGGTCGGGGAGCGGGGTCTGAAGCTGAGTGGTGGCGAGAAGCAGCGAGTGGCCATCGCCCGCACCATCCTTAAGGCTCCTGACATCAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027396.15 |
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| CDS GCA 90 bp | GCTATGCCTGAACTTCATCCAGACGCCCATTGCCAGACTCTGCCGTaGCTGGCTCCGTTCCACCACGAGCAGCCACAAGCCACAGACGCT | + |
|
Preference number: 5 (lower is better) Translates to: AMPELHPDAHCQTLP*LAPFHHEQPQATDA Trigger: AGCGTCTGTGGCTTGTGGCTGCTCGTGGTGGAACGGAGCCAGGCACGGCAGAGTCTGGCAATGGGCGTCTGGATGAAGTTCAGGCATAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027396.15 |
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| CDS GCA 90 bp | CCCAAGCTATGCCTGAACTTCATCCAGACGCCCATTGCCAGACTCTaGCGTGCCTGGCTCCGTTCCACCACGAGCAGCCACAAGCCACAG | + |
|
Preference number: 5 (lower is better) Translates to: PKLCLNFIQTPIARL*RAWLRSTTSSHKPQ Trigger: CTGTGGCTTGTGGCTGCTCGTGGTGGAACGGAGCCAGGCACGGCAGAGTCTGGCAATGGGCGTCTGGATGAAGTTCAGGCATAGCTTGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027396.15 |
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| CDS GCA 90 bp | GAGCAGGAGACCCAAGCTATGCCTGAACTTCATCCAGACGCCCATTaGCAGACTCTGCCGTGCCTGGCTCCGTTCCACCACGAGCAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: EQETQAMPELHPDAH*QTLPCLAPFHHEQP Trigger: TGGCTGCTCGTGGTGGAACGGAGCCAGGCACGGCAGAGTCTGGCAATGGGCGTCTGGATGAAGTTCAGGCATAGCTTGGGTCTCCTGCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027396.15 |
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| CDS TCA 90 bp | CCAAGGCCAGTACCCCCAGAGTCAGGAGTGTCGAGGGCACTAGCGTaGAGAAGAAGCAGGGACTCAAGCCATTCTGAGTCCAAGCGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: PRPVPPESGVSRALA*RRSRDSSHSESKRA Trigger: GGCCCGCTTGGACTCAGAATGGCTTGAGTCCCTGCTTCTTCTTCACGCTAGTGCCCTCGACACTCCTGACTCTGGGGGTACTGGCCTTGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027396.15 |
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| CDS CCA 90 bp | GCAGGACCCACAGGCCAAATTGAACCTGCTGGCCCAGATCTGCTCTaGCCCACCACCACTGCGGGCTGTTCCAAGATACTAGGGCCAAGT | + |
|
Preference number: 5 (lower is better) Translates to: AGPTGQIEPAGPDLL*PTTTAGCSKILGPS Trigger: ACTTGGCCCTAGTATCTTGGAACAGCCCGCAGTGGTGGTGGGCCAGAGCAGATCTGGGCCAGCAGGTTCAATTTGGCCTGTGGGTCCTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027396.15 |
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| CDS TCA 90 bp | CTGCAAATGTCACAGTCCAGAGGAGCAGGAGACCCAAGCTATGCCTaGACTTCATCCAGACGCCCATTGCCAGACTCTGCCGTGCCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: LQMSQSRGAGDPSYA*TSSRRPLPDSAVPG Trigger: GCCAGGCACGGCAGAGTCTGGCAATGGGCGTCTGGATGAAGTTCAGGCATAGCTTGGGTCTCCTGCTCCTCTGGACTGTGACATTTGCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027396.15 |
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| CDS GCA 90 bp | TCGGCTGCAAATGTCACAGTCCAGAGGAGCAGGAGACCCAAGCTATaGCTGAACTTCATCCAGACGCCCATTGCCAGACTCTGCCGTGCC | + |
|
Preference number: 5 (lower is better) Translates to: SAANVTVQRSRRPKL*LNFIQTPIARLCRA Trigger: GGCACGGCAGAGTCTGGCAATGGGCGTCTGGATGAAGTTCAGGCATAGCTTGGGTCTCCTGCTCCTCTGGACTGTGACATTTGCAGCCGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027396.15 |
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| CDS TCA 90 bp | AAGGAGCCAGCAAGGAGGCCAAGCCCGATCACCAGGTTCTGTGTCTaGTTCAGCACAACCAGTGAGGCGGTTGACTTCCACTCCAAACCC | + |
|
Preference number: 5 (lower is better) Translates to: KEPARRPSPITRFCV*FSTTSEAVDFHSKP Trigger: GGGTTTGGAGTGGAAGTCAACCGCCTCACTGGTTGTGCTGAATCAGACACAGAACCTGGTGATCGGGCTTGGCCTCCTTGCTGGCTCCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027396.15 |
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| CDS GCA 90 bp | CCTGTGTCTCATACCCTTCAGGGAAAGACAAGATGGCATCATGAATaGCTGCAGCCTGAGCAGCAGCCTCTACCTCACTGTCCCCAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: PVSHTLQGKTRWHHE*LQPEQQPLPHCPQL Trigger: CAGCTGGGGACAGTGAGGTAGAGGCTGCTGCTCAGGCTGCAGGCATTCATGATGCCATCTTGTCTTTCCCTGAAGGGTATGAGACACAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027396.15 |
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| CDS CCA 90 bp | ATGACGATGGTGGTGCGGTTGGTGCAGACTTTGGCCAGAGAGGCCTaGATGGCTCTCTCATTAGATGTATCCAGTGCTGATGTGGCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: MTMVVRLVQTLAREA*MALSLDVSSADVAS Trigger: TGAGGCCACATCAGCACTGGATACATCTAATGAGAGAGCCATCCAGGCCTCTCTGGCCAAAGTCTGCACCAACCGCACCACCATCGTCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027396.15 |
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| CDS GCA 90 bp | GGCACCATAGTATTTCACCGTTTCAAAGTTGAGCAGAGAGTCTACTaGTCGTGCCCGGGTGGCGTTTTCCTGTGTGTTCATATCACGGCG | + |
|
Preference number: 5 (lower is better) Translates to: GTIVFHRFKVEQRVY*SCPGGVFLCVHITA Trigger: CGCCGTGATATGAACACACAGGAAAACGCCACCCGGGCACGAGCAGTAGACTCTCTGCTCAACTTTGAAACGGTGAAATACTATGGTGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027396.15 |
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| CDS-3UTR CAA 90 bp | GAGGGGACATATCTTTTTCTCCTGAGTTCGCCTTTGGAAGGAAAGAGGTCCCTTGACCCACAGGCCAAATaGAACCTGCTGGCCCAGATC | + |
|
Preference number: 5 (lower is better) Translates to: EGTYLFLLSSPLEGKRSLDPQAK*NLLAQI Trigger: GATCTGGGCCAGCAGGTTCAATTTGGCCTGTGGGTC...AAGGGACCTCTTTCCTTCCAAAGGCGAACTCAGGAGAAAAAGATATGTCCCCTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027396.15 |
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| CDS TCA 90 bp | CTACTTCATAACCCTCGGCACCATAGTATTTCACCGTTTCAAAGTTaGGCAGAGAGTCTACTGCTCGTGCCCGGGTGGCGTTTTCCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: LLHNPRHHSISPFQS*AESLLLVPGWRFPV Trigger: CACAGGAAAACGCCACCCGGGCACGAGCAGTAGACTCTCTGCTCAACTTTGAAACGGTGAAATACTATGGTGCCGAGGGTTATGAAGTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027396.15 |
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| CDS TCA 90 bp | ATGGTGTCGTTGAAGAGGACAGTGTCCTGGGGCACAACTCCAATGTaGGATCGGAGAGAGATCTGGGTCACCTGTGAAATATCCTGTCCA | + |
|
Preference number: 5 (lower is better) Translates to: MVSLKRTVSWGTTPM*DRREIWVTCEISCP Trigger: TGGACAGGATATTTCACAGGTGACCCAGATCTCTCTCCGATCTCACATTGGAGTTGTGCCCCAGGACACTGTCCTCTTCAACGACACCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027396.15 |
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| CDS-3UTR CAA 90 bp | GGGACATATCTTTTTCTCCTGAGTTCGCCTTTGGAAGGAAAGAGGTCCCTTTTATCATCCAGACGCCCATaGCCAGACTCTGCCGTGCCT | + |
|
Preference number: 5 (lower is better) Translates to: GTYLFLLSSPLEGKRSLLSSRRP*PDSAVP Trigger: AGGCACGGCAGAGTCTGGCAATGGGCGTCTGGATGA...TAAAAGGGACCTCTTTCCTTCCAAAGGCGAACTCAGGAGAAAAAGATATGTCCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027396.15 |
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| CDS-3UTR CAA 90 bp | TTGCGCAGGCCATTTATTTCCTCACGATGCTTTCTGGAAGGTCCCTTTTCCTTAACGATGGTGGTGCGGTaGGTGCAGACTTTGGCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: LRRPFISSRCFLEGPFSLTMVVR*VQTLAR Trigger: TCTGGCCAAAGTCTGCACCAACCGCACCACCATCGT...TAAGGAAAAGGGACCTTCCAGAAAGCATCGTGAGGAAATAAATGGCCTGCGCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027396.15 |
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| CDS-3UTR CAA 90 bp | GAGGGGACATATCTTTTTCTCCTGAGTTCGCCTTTGGAAGGAAAGAGGTCCCTTACGATGGTGGTGCGGTaGGTGCAGACTTCAGGGAAA | + |
|
Preference number: 5 (lower is better) Translates to: EGTYLFLLSSPLEGKRSLTMVVR*VQTSGK Trigger: TTTCCCTGAAGTCTGCACCAACCGCACCACCATCGT...AAGGGACCTCTTTCCTTCCAAAGGCGAACTCAGGAGAAAAAGATATGTCCCCTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000161215.2 |
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| CDS CCA 90 bp | TGCCTTCCTCTCTCTATGATGCAACCGTCCTTGATGACCAGAATCTaGTCAGCATTGACCACAGTTGAGAGCCTGTGTGCTATGACGATG | + |
|
Preference number: 5 (lower is better) Translates to: CLPLSMMQPSLMTRI*SALTTVESLCAMTM Trigger: CATCGTCATAGCACACAGGCTCTCAACTGTGGTCAATGCTGACCAGATTCTGGTCATCAAGGACGGTTGCATCATAGAGAGAGGAAGGCA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027396.15 ENSMUST00000161215.2 |
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| CDS-3UTR CAA 90 bp | GAGGGGACATATCTTTTTCTCCTGAGTTCGCCTTTGGAAGGAAAGAGGTCCCTTATAGCAGGCGCAAAATaGTGCTCTTTCCTGCCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: EGTYLFLLSSPLEGKRSLIAGAK*CSFLPQ Trigger: CTGGGGCAGGAAAGAGCACAATTTTGCGCCTGCTAT...AAGGGACCTCTTTCCTTCCAAAGGCGAACTCAGGAGAAAAAGATATGTCCCCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000027396.15 |
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| CDS-3UTR CAA 90 bp | AGAGGGGACATATCTTTTTCTCCTGAGTTCGCCTTTGGAAGGAAAGAGGTCCCTTTCAGGGACAGTTTCTaGTCCTTGCTGCTGCAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: RGDISFSPEFAFGRKEVPFRDSF*SLLLQL Trigger: CAGCTGCAGCAGCAAGGACAAGAAACTGTCCCTGAA...AGGGACCTCTTTCCTTCCAAAGGCGAACTCAGGAGAAAAAGATATGTCCCCTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027396.15 ENSMUST00000161215.2 |
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| CDS-3UTR CAA 90 bp | CTCACGATGCTTTCTGGAAGGTCCCTTTTCCTTACAATAGCTAGCACCAAACTCTTCAGGGACAGTTTCTaGTCCTTGCTGCTGCAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: LTMLSGRSLFLTIASTKLFRDSF*SLLLQL Trigger: CAGCTGCAGCAGCAAGGACAAGAAACTGTCCCTGAA...GAGTTTGGTGCTAGCTATTGTAAGGAAAAGGGACCTTCCAGAAAGCATCGTGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027396.15 |
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| CDS GCA 90 bp | ATAGTATTTCACCGTTTCAAAGTTGAGCAGAGAGTCTACTGCTCGTaGCCGGGTGGCGTTTTCCTGTGTGTTCATATCACGGCGAAACTT | + |
|
Preference number: 5 (lower is better) Translates to: IVFHRFKVEQRVYCS*PGGVFLCVHITAKL Trigger: AAGTTTCGCCGTGATATGAACACACAGGAAAACGCCACCCGGGCACGAGCAGTAGACTCTCTGCTCAACTTTGAAACGGTGAAATACTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027396.15 |
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| CDS-3UTR CAA 90 bp | CTTTTCCTTACAATAGCTAGCACCAAACTCCTACACCAGGATGAAATGAAGGCACAACCAGTGAGGCGGTaGACTTCCACTCCAAACCCT | + |
|
Preference number: 5 (lower is better) Translates to: LFLTIASTKLLHQDEMKAQPVRR*TSTPNP Trigger: AGGGTTTGGAGTGGAAGTCAACCGCCTCACTGGTTG...TGCCTTCATTTCATCCTGGTGTAGGAGTTTGGTGCTAGCTATTGTAAGGAAAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027396.15 |
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| CDS-3UTR CAA 90 bp | GAGGGGACATATCTTTTTCTCCTGAGTTCGCCTTTGGAAGGAAAGAGGTCCCTTGAGAGGCATGTACAGTaGGGTGATGTAAGTGCCAAA | + |
|
Preference number: 5 (lower is better) Translates to: EGTYLFLLSSPLEGKRSLERHVQ*GDVSAK Trigger: TTTGGCACTTACATCACCCAACTGTACATGCCTCTC...AAGGGACCTCTTTCCTTCCAAAGGCGAACTCAGGAGAAAAAGATATGTCCCCTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027396.15 |
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| CDS-3UTR CAA 90 bp | GGGGACATATCTTTTTCTCCTGAGTTCGCCTTTGGAAGGAAAGAGGTCCCTTTTAGAATCTGGTCAGCATaGACCACAGTTGAGAGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: GDISFSPEFAFGRKEVPFRIWSA*TTVESL Trigger: CAGGCTCTCAACTGTGGTCAATGCTGACCAGATTCT...AAAAGGGACCTCTTTCCTTCCAAAGGCGAACTCAGGAGAAAAAGATATGTCCCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000027396.15 ENSMUST00000161215.2 |
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| CDS-3UTR CAA 90 bp | ATGCTTTCTGGAAGGTCCCTTTTCCTTACAATAGCTAGCACCAAACTCCTACACAGGAAGGTTCGCAGGTaGCTCACAAAACCTGTACTG | + |
|
Preference number: 5 (lower is better) Translates to: MLSGRSLFLTIASTKLLHRKVRR*LTKPVL Trigger: CAGTACAGGTTTTGTGAGCAACCTGCGAACCTTCCT...GTGTAGGAGTTTGGTGCTAGCTATTGTAAGGAAAAGGGACCTTCCAGAAAGCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027396.15 |
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| CDS-3UTR CAA 90 bp | GGGACATATCTTTTTCTCCTGAGTTCGCCTTTGGAAGGAAAGAGGTCCCTTTTATTAGCAATGGTGTCGTaGAAGAGGACAGTGTCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: GTYLFLLSSPLEGKRSLLLAMVS*KRTVSW Trigger: CCAGGACACTGTCCTCTTCAACGACACCATTGCTAA...TAAAAGGGACCTCTTTCCTTCCAAAGGCGAACTCAGGAGAAAAAGATATGTCCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027396.15 |
||
| CDS-3UTR CAA 90 bp | ATGCTTTCTGGAAGGTCCCTTTTCCTTACAATAGCTAGCACCAAACTCCTACACAGAATCTGGTCAGCATaGACCACAGTTGAGAGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: MLSGRSLFLTIASTKLLHRIWSA*TTVESL Trigger: CAGGCTCTCAACTGTGGTCAATGCTGACCAGATTCT...GTGTAGGAGTTTGGTGCTAGCTATTGTAAGGAAAAGGGACCTTCCAGAAAGCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027396.15 |
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| CDS TCA 90 bp | TCACCTGTGAAATATCCTGTCCATCTATTCGGATGCAGCCAGAGCTaGTGTCATAGAAGCGAAATAGCAGGCGCAAAATTGTGCTCTTTC | + |
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Preference number: 5 (lower is better) Translates to: SPVKYPVHLFGCSQS*CHRSEIAGAKLCSF Trigger: GAAAGAGCACAATTTTGCGCCTGCTATTTCGCTTCTATGACATCAGCTCTGGCTGCATCCGAATAGATGGACAGGATATTTCACAGGTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027396.15 |
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| CDS-3UTR CAA 90 bp | ATGCTTTCTGGAAGGTCCCTTTTCCTTACAATAGCTAGCACCAAACTCCTACACTTCACCGTTTCAAAGTaGAGCAGAGAGTCTACTGCT | + |
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Preference number: 5 (lower is better) Translates to: MLSGRSLFLTIASTKLLHFTVSK*SRESTA Trigger: AGCAGTAGACTCTCTGCTCAACTTTGAAACGGTGAA...GTGTAGGAGTTTGGTGCTAGCTATTGTAAGGAAAAGGGACCTTCCAGAAAGCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027396.15 |
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| CDS CCA 72 bp | GGCCACCCGAGGGCCAGCCGCCCAAGACAGCTCTTCTaGGCCAGCAGGCACCTCCCGACGCCTGCGGGGAAG | + |
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Preference number: 6 (lower is better) Translates to: GHPRASRPRQLF*ASRHLPTPAGK Trigger: CTTCCCCGCAGGCGTCGGGAGGTGCCTGCTGGCCCAGAAGAGCTGTCTTGGGCGGCTGGCCCTCGGGTGGCC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027396.15 |
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| CDS GCA 72 bp | GGAGCCTTAAGGATGGTGCGGGCGATGGCCACTCGCTaGTTCTCGCCACCACTCAGCTTCAGACCCCGCTCC | + |
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Preference number: 6 (lower is better) Translates to: GALRMVRAMATR*FSPPLSFRPRS Trigger: GGAGCGGGGTCTGAAGCTGAGTGGTGGCGAGAAGCAGCGAGTGGCCATCGCCCGCACCATCCTTAAGGCTCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027396.15 |
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| CDS TCA 72 bp | ACTAGCGTGAAGAAGAAGCAGGGACTCAAGCCATTCTaGGTCCAAGCGGGCCCCGCCGGCCCTTCGGTCTCG | + |
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Preference number: 6 (lower is better) Translates to: TSVKKKQGLKPF*VQAGPAGPSVS Trigger: CGAGACCGAAGGGCCGGCGGGGCCCGCTTGGACTCAGAATGGCTTGAGTCCCTGCTTCTTCTTCACGCTAGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027396.15 |
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| CDS GCA 72 bp | GAACTTCATCCAGACGCCCATTGCCAGACTCTGCCGTaGCTGGCTCCGTTCCACCACGAGCAGCCACAAGCC | + |
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Preference number: 6 (lower is better) Translates to: ELHPDAHCQTLP*LAPFHHEQPQA Trigger: GGCTTGTGGCTGCTCGTGGTGGAACGGAGCCAGGCACGGCAGAGTCTGGCAATGGGCGTCTGGATGAAGTTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027396.15 |
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| CDS GCA 72 bp | TGCCTGAACTTCATCCAGACGCCCATTGCCAGACTCTaGCGTGCCTGGCTCCGTTCCACCACGAGCAGCCAC | + |
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Preference number: 6 (lower is better) Translates to: CLNFIQTPIARL*RAWLRSTTSSH Trigger: GTGGCTGCTCGTGGTGGAACGGAGCCAGGCACGGCAGAGTCTGGCAATGGGCGTCTGGATGAAGTTCAGGCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027396.15 |
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| CDS CCA 72 bp | CATCTGAAGTGTGGCCAGAAACAGCTGCAGCACATATaGGGCCACCCGAGGGCCAGCCGCCCAAGACAGCTC | + |
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Preference number: 6 (lower is better) Translates to: HLKCGQKQLQHI*GHPRASRPRQL Trigger: GAGCTGTCTTGGGCGGCTGGCCCTCGGGTGGCCCCATATGTGCTGCAGCTGTTTCTGGCCACACTTCAGATG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027396.15 |
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| CDS CCA 72 bp | TTCATCCAGACGCCCATTGCCAGACTCTGCCGTGCCTaGCTCCGTTCCACCACGAGCAGCCACAAGCCACAG | + |
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Preference number: 6 (lower is better) Translates to: FIQTPIARLCRA*LRSTTSSHKPQ Trigger: CTGTGGCTTGTGGCTGCTCGTGGTGGAACGGAGCCAGGCACGGCAGAGTCTGGCAATGGGCGTCTGGATGAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027396.15 |
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| CDS GCA 72 bp | ACCCAAGCTATGCCTGAACTTCATCCAGACGCCCATTaGCAGACTCTGCCGTGCCTGGCTCCGTTCCACCAC | + |
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Preference number: 6 (lower is better) Translates to: TQAMPELHPDAH*QTLPCLAPFHH Trigger: GTGGTGGAACGGAGCCAGGCACGGCAGAGTCTGGCAATGGGCGTCTGGATGAAGTTCAGGCATAGCTTGGGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027396.15 |
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| CDS TCA 72 bp | GTACCCCCAGAGTCAGGAGTGTCGAGGGCACTAGCGTaGAGAAGAAGCAGGGACTCAAGCCATTCTGAGTCC | + |
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Preference number: 6 (lower is better) Translates to: VPPESGVSRALA*RRSRDSSHSES Trigger: GGACTCAGAATGGCTTGAGTCCCTGCTTCTTCTTCACGCTAGTGCCCTCGACACTCCTGACTCTGGGGGTAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027396.15 |
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| CDS TCA 72 bp | TCACAGTCCAGAGGAGCAGGAGACCCAAGCTATGCCTaGACTTCATCCAGACGCCCATTGCCAGACTCTGCC | + |
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Preference number: 6 (lower is better) Translates to: SQSRGAGDPSYA*TSSRRPLPDSA Trigger: GGCAGAGTCTGGCAATGGGCGTCTGGATGAAGTTCAGGCATAGCTTGGGTCTCCTGCTCCTCTGGACTGTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027396.15 |
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| CDS TCA 72 bp | GCAAGGAGGCCAAGCCCGATCACCAGGTTCTGTGTCTaGTTCAGCACAACCAGTGAGGCGGTTGACTTCCAC | + |
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Preference number: 6 (lower is better) Translates to: ARRPSPITRFCV*FSTTSEAVDFH Trigger: GTGGAAGTCAACCGCCTCACTGGTTGTGCTGAATCAGACACAGAACCTGGTGATCGGGCTTGGCCTCCTTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027396.15 |
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| CDS GCA 72 bp | AAGAGACGTAGCTCCACACCTCGGGACGTAAACTGCTaGACCCGGATCCATAGGAAGGTTCGCAGGTTGCTC | + |
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Preference number: 6 (lower is better) Translates to: KRRSSTPRDVNC*TRIHRKVRRLL Trigger: GAGCAACCTGCGAACCTTCCTATGGATCCGGGTGCAGCAGTTTACGTCCCGAGGTGTGGAGCTACGTCTCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027396.15 |
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| CDS GCA 72 bp | GAGAAGAGACGTAGCTCCACACCTCGGGACGTAAACTaGTGCACCCGGATCCATAGGAAGGTTCGCAGGTTG | + |
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Preference number: 6 (lower is better) Translates to: EKRRSSTPRDVN*CTRIHRKVRRL Trigger: CAACCTGCGAACCTTCCTATGGATCCGGGTGCAGCAGTTTACGTCCCGAGGTGTGGAGCTACGTCTCTTCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027396.15 |
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| CDS CCA 72 bp | ACAGGCCAAATTGAACCTGCTGGCCCAGATCTGCTCTaGCCCACCACCACTGCGGGCTGTTCCAAGATACTA | + |
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Preference number: 6 (lower is better) Translates to: TGQIEPAGPDLL*PTTTAGCSKIL Trigger: TAGTATCTTGGAACAGCCCGCAGTGGTGGTGGGCCAGAGCAGATCTGGGCCAGCAGGTTCAATTTGGCCTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027396.15 |
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| CDS TCA 72 bp | GACCTACCAGAGCCACCGTCTGTCCAGGCATCACAGTaGAGGACACATCTTGTAAGGTCTCCTGCCCATCAG | + |
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Preference number: 6 (lower is better) Translates to: DLPEPPSVQASQ*RTHLVRSPAHQ Trigger: CTGATGGGCAGGAGACCTTACAAGATGTGTCCTTCACTGTGATGCCTGGACAGACGGTGGCTCTGGTAGGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027396.15 |
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| CDS CAA 90 bp | GAGAGCCTGTGTGCTATGACGATGGTGGTGCGGTTGGTGCAGACTTaGGCCAGAGAGGCCTGGATGGCTCTCTCATTAGATGTATCCAGT | + |
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Preference number: 6 (lower is better) Translates to: ESLCAMTMVVRLVQT*AREAWMALSLDVSS Trigger: ACTGGATACATCTAATGAGAGAGCCATCCAGGCCTCTCTGGCCAAAGTCTGCACCAACCGCACCACCATCGTCATAGCACACAGGCTCTC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027396.15 |
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| CDS CAA 90 bp | TGCCGTGTCCTGAGGTTTAGATTCTTCAGGGACAGTTTCTTGTCCTaGCTGCTGCAGCTGCCACATCTCGGCATAAACGCCACCTCGGGA | + |
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Preference number: 6 (lower is better) Translates to: CRVLRFRFFRDSFLS*LLQLPHLGINATSG Trigger: TCCCGAGGTGGCGTTTATGCCGAGATGTGGCAGCTGCAGCAGCAAGGACAAGAAACTGTCCCTGAAGAATCTAAACCTCAGGACACGGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027396.15 ENSMUST00000161215.2 |
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| CDS TCA 72 bp | AACCCTCGGCACCATAGTATTTCACCGTTTCAAAGTTaGGCAGAGAGTCTACTGCTCGTGCCCGGGTGGCGT | + |
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Preference number: 6 (lower is better) Translates to: NPRHHSISPFQS*AESLLLVPGWR Trigger: ACGCCACCCGGGCACGAGCAGTAGACTCTCTGCTCAACTTTGAAACGGTGAAATACTATGGTGCCGAGGGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027396.15 |
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| CDS GCA 72 bp | AATGTCACAGTCCAGAGGAGCAGGAGACCCAAGCTATaGCTGAACTTCATCCAGACGCCCATTGCCAGACTC | + |
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Preference number: 6 (lower is better) Translates to: NVTVQRSRRPKL*LNFIQTPIARL Trigger: GAGTCTGGCAATGGGCGTCTGGATGAAGTTCAGGCATAGCTTGGGTCTCCTGCTCCTCTGGACTGTGACATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027396.15 |
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| CDS CCA 72 bp | GTGGTGCGGTTGGTGCAGACTTTGGCCAGAGAGGCCTaGATGGCTCTCTCATTAGATGTATCCAGTGCTGAT | + |
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Preference number: 6 (lower is better) Translates to: VVRLVQTLAREA*MALSLDVSSAD Trigger: ATCAGCACTGGATACATCTAATGAGAGAGCCATCCAGGCCTCTCTGGCCAAAGTCTGCACCAACCGCACCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027396.15 |
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| CDS CAA 72 bp | TGTGCTATGACGATGGTGGTGCGGTTGGTGCAGACTTaGGCCAGAGAGGCCTGGATGGCTCTCTCATTAGAT | + |
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Preference number: 6 (lower is better) Translates to: CAMTMVVRLVQT*AREAWMALSLD Trigger: ATCTAATGAGAGAGCCATCCAGGCCTCTCTGGCCAAAGTCTGCACCAACCGCACCACCATCGTCATAGCACA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027396.15 |
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| CDS GCA 72 bp | CACCGTTTCAAAGTTGAGCAGAGAGTCTACTGCTCGTaGCCGGGTGGCGTTTTCCTGTGTGTTCATATCACG | + |
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Preference number: 6 (lower is better) Translates to: HRFKVEQRVYCS*PGGVFLCVHIT Trigger: CGTGATATGAACACACAGGAAAACGCCACCCGGGCACGAGCAGTAGACTCTCTGCTCAACTTTGAAACGGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027396.15 |
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| CDS GCA 72 bp | CATACCCTTCAGGGAAAGACAAGATGGCATCATGAATaGCTGCAGCCTGAGCAGCAGCCTCTACCTCACTGT | + |
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Preference number: 6 (lower is better) Translates to: HTLQGKTRWHHE*LQPEQQPLPHC Trigger: ACAGTGAGGTAGAGGCTGCTGCTCAGGCTGCAGGCATTCATGATGCCATCTTGTCTTTCCCTGAAGGGTATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027396.15 |
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| CDS CAA 72 bp | GTGGCGTTTTCCTGTGTGTTCATATCACGGCGAAACTaGGCTCTCCACTCGGTGACCACGATAGTCAGGATG | + |
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Preference number: 6 (lower is better) Translates to: VAFSCVFISRRN*ALHSVTTIVRM Trigger: CATCCTGACTATCGTGGTCACCGAGTGGAGAGCCAAGTTTCGCCGTGATATGAACACACAGGAAAACGCCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027396.15 |
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| CDS CAA 72 bp | GTTGAGAGCCTGTGTGCTATGACGATGGTGGTGCGGTaGGTGCAGACTTCAGGGAAAGACAAGATGGCATCA | + |
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Preference number: 6 (lower is better) Translates to: VESLCAMTMVVR*VQTSGKDKMAS Trigger: TGATGCCATCTTGTCTTTCCCTGAAGTCTGCACCAACCGCACCACCATCGTCATAGCACACAGGCTCTCAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161215.2 |
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| CDS CAA 90 bp | CTCTCTATGATGCAACCGTCCTTGATGACCAGAATCTGGTCAGCATaGACCACAGTTGAGAGCCTGTGTGCTATGACGATGGTGGTGCGG | + |
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Preference number: 6 (lower is better) Translates to: LSMMQPSLMTRIWSA*TTVESLCAMTMVVR Trigger: CCGCACCACCATCGTCATAGCACACAGGCTCTCAACTGTGGTCAATGCTGACCAGATTCTGGTCATCAAGGACGGTTGCATCATAGAGAG 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027396.15 ENSMUST00000161215.2 |
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| CDS TCA 72 bp | CTGAAGTGCACATTTTCAAACTCAATCCGGCCCTTATaGAAACGAAGGGGCCCTGCACCAGGAACATCCTTC | + |
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Preference number: 6 (lower is better) Translates to: LKCTFSNSIRPL*KRRGPAPGTSF Trigger: GAAGGATGTTCCTGGTGCAGGGCCCCTTCGTTTTCATAAGGGCCGGATTGAGTTTGAAAATGTGCACTTCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027396.15 |
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| CDS TCA 72 bp | TTGAAGAGGACAGTGTCCTGGGGCACAACTCCAATGTaGGATCGGAGAGAGATCTGGGTCACCTGTGAAATA | + |
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Preference number: 6 (lower is better) Translates to: LKRTVSWGTTPM*DRREIWVTCEI Trigger: TATTTCACAGGTGACCCAGATCTCTCTCCGATCTCACATTGGAGTTGTGCCCCAGGACACTGTCCTCTTCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027396.15 |
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| CDS GCA 72 bp | AATGTCCCTATAGAAGATGGGGACCAACACATTGAGTaGTCGTTCCAACCCCATGAGTCCCAGGCATATGAG | + |
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Preference number: 6 (lower is better) Translates to: NVPIEDGDQHIE*SFQPHESQAYE Trigger: CTCATATGCCTGGGACTCATGGGGTTGGAACGAGCACTCAATGTGTTGGTCCCCATCTTCTATAGGGACATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027396.15 |
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| CDS GCA 72 bp | GTATTTCACCGTTTCAAAGTTGAGCAGAGAGTCTACTaGTCGTGCCCGGGTGGCGTTTTCCTGTGTGTTCAT | + |
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Preference number: 6 (lower is better) Translates to: VFHRFKVEQRVY*SCPGGVFLCVH Trigger: ATGAACACACAGGAAAACGCCACCCGGGCACGAGCAGTAGACTCTCTGCTCAACTTTGAAACGGTGAAATAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027396.15 |
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| CDS CCA 72 bp | CTCTCTATGATGCAACCGTCCTTGATGACCAGAATCTaGTCAGCATTGACCACAGTTGAGAGCCTGTGTGCT | + |
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Preference number: 6 (lower is better) Translates to: LSMMQPSLMTRI*SALTTVESLCA Trigger: AGCACACAGGCTCTCAACTGTGGTCAATGCTGACCAGATTCTGGTCATCAAGGACGGTTGCATCATAGAGAG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027396.15 ENSMUST00000161215.2 |
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| CDS CAA 72 bp | ATGCAACCGTCCTTGATGACCAGAATCTGGTCAGCATaGACCACAGTTGAGAGCCTGTGTGCTATGACGATG | + |
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Preference number: 6 (lower is better) Translates to: MQPSLMTRIWSA*TTVESLCAMTM Trigger: CATCGTCATAGCACACAGGCTCTCAACTGTGGTCAATGCTGACCAGATTCTGGTCATCAAGGACGGTTGCAT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027396.15 ENSMUST00000161215.2 |
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| CDS CAA 72 bp | GTAGTAGGTGCCAAACCAGTTGAGAGGCATGTACAGTaGGGTGATGTAAGTGCCAAAAAGCACAAAGTCCCC | + |
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Preference number: 6 (lower is better) Translates to: VVGAKPVERHVQ*GDVSAKKHKVP Trigger: GGGGACTTTGTGCTTTTTGGCACTTACATCACCCAACTGTACATGCCTCTCAACTGGTTTGGCACCTACTAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027396.15 |
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| CDS TCA 72 bp | ACACATCTTGTAAGGTCTCCTGCCCATCAGCGTAGCTaGAGTGCACATTTTCAAACTCAATCCGGCCCTTAT | + |
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Preference number: 6 (lower is better) Translates to: THLVRSPAHQRS*SAHFQTQSGPY Trigger: ATAAGGGCCGGATTGAGTTTGAAAATGTGCACTTCAGCTACGCTGATGGGCAGGAGACCTTACAAGATGTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027396.15 |
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| CDS TCA 72 bp | AAATATCCTGTCCATCTATTCGGATGCAGCCAGAGCTaGTGTCATAGAAGCGAAATAGCAGGCGCAAAATTG | + |
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Preference number: 6 (lower is better) Translates to: KYPVHLFGCSQS*CHRSEIAGAKL Trigger: CAATTTTGCGCCTGCTATTTCGCTTCTATGACATCAGCTCTGGCTGCATCCGAATAGATGGACAGGATATTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027396.15 |
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