Pregenerated sensors for ABCB1B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028970Ensembl transcript IDs: ENSMUST00000009058.10, ENSMUST00000196580.5, ENSMUST00000198650.2, ENSMUST00000199955.5
Found 161 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ATACATCATGGCCTGGGTGAAGGAGAACGTGATCCCAAACACGTGTaGTTTCTTCATCGCATTTCTGTATGGTACCTGCAAGCTCTGGGC | + |
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Preference number: 1 (lower is better) Translates to: IHHGLGEGERDPKHV*FLHRISVWYLQALG Trigger: GCCCAGAGCTTGCAGGTACCATACAGAAATGCGATGAAGAAAGCACACGTGTTTGGGATCACGTTCTCCTTCACCCAGGCCATGATGTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199955.5 |
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| 3UTR CCA 90 bp | GCATCACTGGCGAGCCTGGTGGTCAGTGAGCCAGTGCTGTTCTTATaGTCATCGAACCAGCTTATATCCTGTCTCAGCATGGATTTGAAA | + |
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Preference number: 1 (lower is better) Translates to: ASLASLVVSEPVLFL*SSNQLISCLSMDLK Trigger: TTTCAAATCCATGCTGAGACAGGATATAAGCTGGTTCGATGACCATAAGAACAGCACTGGCTCACTGACCACCAGGCTCGCCAGTGATGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199955.5 |
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| 3UTR GCA 90 bp | ATCCCAAACACGTGTGCTTTCTTCATCGCATTTCTGTATGGTACCTaGAAGCTCTGGGCATACATGGTTTCAAACTTCTGCTCCCGAGTC | + |
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Preference number: 1 (lower is better) Translates to: IPNTCAFFIAFLYGT*KLWAYMVSNFCSRV Trigger: GACTCGGGAGCAGAAGTTTGAAACCATGTATGCCCAGAGCTTGCAGGTACCATACAGAAATGCGATGAAGAAAGCACACGTGTTTGGGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199955.5 |
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| 3UTR GCA 90 bp | GTCAATGCTTGGCTCGTTATCAATTATCTTGAAGATTTCAAAGGCTaGCCCTCGTGCGTTTGCAAAGGCTTCTATGTTTGGGGCCAAGTG | + |
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Preference number: 1 (lower is better) Translates to: VNAWLVINYLEDFKG*PSCVCKGFYVWGQV Trigger: CACTTGGCCCCAAACATAGAAGCCTTTGCAAACGCACGAGGGGCAGCCTTTGAAATCTTCAAGATAATTGATAACGAGCCAAGCATTGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199955.5 |
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| 3UTR GCA 90 bp | TGGCTCGTTATCAATTATCTTGAAGATTTCAAAGGCTGCCCCTCGTaGGTTTGCAAAGGCTTCTATGTTTGGGGCCAAGTGTCCAATACT | + |
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Preference number: 1 (lower is better) Translates to: WLVINYLEDFKGCPS*VCKGFYVWGQVSNT Trigger: AGTATTGGACACTTGGCCCCAAACATAGAAGCCTTTGCAAACGCACGAGGGGCAGCCTTTGAAATCTTCAAGATAATTGATAACGAGCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000199955.5 |
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| 3UTR GCA 90 bp | CTGTATGGTACCTGCAAGCTCTGGGCATACATGGTTTCAAACTTCTaGTCCCGAGTCAAAGAGACAATAGTGCGGAAGTTTTCAATTGCT | + |
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Preference number: 1 (lower is better) Translates to: LYGTCKLWAYMVSNF*SRVKETIVRKFSIA Trigger: AGCAATTGAAAACTTCCGCACTATTGTCTCTTTGACTCGGGAGCAGAAGTTTGAAACCATGTATGCCCAGAGCTTGCAGGTACCATACAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199955.5 |
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| 3UTR TCA 90 bp | CCTTTGTTGAGAAGCTGTCAATGCTTGGCTCGTTATCAATTATCTTaGAGATTTCAAAGGCTGCCCCTCGTGCGTTTGCAAAGGCTTCTA | + |
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Preference number: 1 (lower is better) Translates to: PLLRSCQCLARYQLS*RFQRLPLVRLQRLL Trigger: TAGAAGCCTTTGCAAACGCACGAGGGGCAGCCTTTGAAATCTTCAAGATAATTGATAACGAGCCAAGCATTGACAGCTTCTCAACAAAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199955.5 |
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| 3UTR GCA 90 bp | AATCAATACTTACAACATAACATTTTCAAAAGTCATGAGTTGTTGTaGCACCAAGTAGGCACCGAACCGGAAACAAGCAGCATAAGAAAA | + |
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Preference number: 1 (lower is better) Translates to: NQYLQHNIFKSHELL*HQVGTEPETSSIRK Trigger: TTTTCTTATGCTGCTTGTTTCCGGTTCGGTGCCTACTTGGTGGCACAACAACTCATGACTTTTGAAAATGTTATGTTGTAAGTATTGATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000199955.5 |
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| 3UTR-3UTR GCA 90 bp | GCAAGCCTGGCGCCCATCGCCCCTTTAACACTAGAAGCATCACTGGCGAGCCTGAGCTCCCCAACATCATaGACATCAAACCAGCCTATC | + |
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Preference number: 2 (lower is better) Translates to: ASLAPIAPLTLEASLASLSSPTS*TSNQPI Trigger: GATAGGCTGGTTTGATGTGCATGATGTTGGGGAGCT...CAGGCTCGCCAGTGATGCTTCTAGTGTTAAAGGGGCGATGGGCGCCAGGCTTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000199955.5 |
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| 3UTR-3UTR CCA 90 bp | ATCGCCCCTTTAACACTAGAAGCATCACTGGCGAGCCTGGTGGTCAGTGAGCCAACCAGGGTGTCAAATTaGTGGGGCAGTTTCATGATG | + |
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Preference number: 2 (lower is better) Translates to: IAPLTLEASLASLVVSEPTRVSN*WGSFMM Trigger: CATCATGAAACTGCCCCACCAATTTGACACCCTGGT...TGGCTCACTGACCACCAGGCTCGCCAGTGATGCTTCTAGTGTTAAAGGGGCGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000199955.5 |
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| 3UTR-3UTR TCA 90 bp | ATCGCCCCTTTAACACTAGAAGCATCACTGGCGAGCCTGGTGGTCAGTGAGCCATTTGTAGCCCTTTGTTaGGAAGCTGTCAATGCTTGG | + |
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Preference number: 2 (lower is better) Translates to: IAPLTLEASLASLVVSEPFVALC*EAVNAW Trigger: CCAAGCATTGACAGCTTCTCAACAAAGGGCTACAAA...TGGCTCACTGACCACCAGGCTCGCCAGTGATGCTTCTAGTGTTAAAGGGGCGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199955.5 |
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| 3UTR-3UTR GCA 90 bp | ATCGCCCCTTTAACACTAGAAGCATCACTGGCGAGCCTGGTGGTCAGTGAGCCACTTCTCTCTTGGTCTTaGTTTCTGTGGACACTTCTG | + |
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Preference number: 2 (lower is better) Translates to: IAPLTLEASLASLVVSEPLLSWS*FLWTLL Trigger: CAGAAGTGTCCACAGAAAGCAAGACCAAGAGAGAAG...TGGCTCACTGACCACCAGGCTCGCCAGTGATGCTTCTAGTGTTAAAGGGGCGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199955.5 |
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| 3UTR-3UTR TCA 90 bp | TCTCAGCATGGATTTGAAAACCATGTATCGGACTCGCTTGGTGAGGATCTCTCCAGGCCCTTCAAGATCTaGACTTCGCTTCTCGATGGG | + |
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Preference number: 2 (lower is better) Translates to: SQHGFENHVSDSLGEDLSRPFKI*TSLLDG Trigger: CCCATCGAGAAGCGAAGTTCAGATCTTGAAGGGCCT...GGAGAGATCCTCACCAAGCGAGTCCGATACATGGTTTTCAAATCCATGCTGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199955.5 |
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| 3UTR-3UTR TCA 90 bp | ATGGTTTCAAACTTCTGCTCCCGAGTCAAAGAGACAATAGTGCGGAAGTTTTCAAGACTAAGGAGAGGATaGCTCCTGTCCCGAGGTTTG | + |
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Preference number: 2 (lower is better) Translates to: MVSNFCSRVKETIVRKFSRLRRG*LLSRGL Trigger: CAAACCTCGGGACAGGAGTCATCCTCTCCTTAGTCT...TGAAAACTTCCGCACTATTGTCTCTTTGACTCGGGAGCAGAAGTTTGAAACCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199955.5 |
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| 3UTR CAA 90 bp | CCCTTTGTTGAGAAGCTGTCAATGCTTGGCTCGTTATCAATTATCTaGAAGATTTCAAAGGCTGCCCCTCGTGCGTTTGCAAAGGCTTCT | + |
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Preference number: 2 (lower is better) Translates to: PFVEKLSMLGSLSII*KISKAAPRAFAKAS Trigger: AGAAGCCTTTGCAAACGCACGAGGGGCAGCCTTTGAAATCTTCAAGATAATTGATAACGAGCCAAGCATTGACAGCTTCTCAACAAAGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199955.5 |
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| 3UTR-3UTR TCA 90 bp | CCGGAAACAAGCAGCATAAGAAAAATACATCATGGCCTGGGTGAAGGAGAACGTAGGCATTGGCTTCCTTaGCAGCTTTCTCAATCTCAT | + |
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Preference number: 2 (lower is better) Translates to: PETSSIRKIHHGLGEGERRHWLP*QLSQSH Trigger: ATGAGATTGAGAAAGCTGTCAAGGAAGCCAATGCCT...ACGTTCTCCTTCACCCAGGCCATGATGTATTTTTCTTATGCTGCTTGTTTCCGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000199955.5 |
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| 3UTR-3UTR TCA 90 bp | TTTCTTCATCGCATTTCTGTATGGTACCTGCAAGCTCTGGGCATACATGGTTTCAGGCAATCACAGTTCTaGTGGCTGCTAAGACTTCTT | + |
|
Preference number: 2 (lower is better) Translates to: FLHRISVWYLQALGIHGFRQSQF*WLLRLL Trigger: AAGAAGTCTTAGCAGCCATCAGAACTGTGATTGCCT...GAAACCATGTATGCCCAGAGCTTGCAGGTACCATACAGAAATGCGATGAAGAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199955.5 |
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| 3UTR-3UTR TCA 90 bp | TCTCAAGCTGTTTCTTGTCCTTCAAGGCTTGGCCAGACAACAGCTTCATTTCAACATCAAAACCAGCAATaGCGTCAGCATTACGAACTG | + |
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Preference number: 2 (lower is better) Translates to: SQAVSCPSRLGQTTASFQHQNQQ*RQHYEL Trigger: CAGTTCGTAATGCTGACGTCATTGCTGGTTTTGATG...TTGAAATGAAGCTGTTGTCTGGCCAAGCCTTGAAGGACAAGAAACAGCTTGAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199955.5 |
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| 3UTR CAA 90 bp | TTTGAAGTAAATGCCCTTTTCTCTCATGAGCTCATCATGATTTCCTaGCTCCACAATGACACCACCATCAAAACCAGCAATGACGTCAGC | + |
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Preference number: 2 (lower is better) Translates to: FEVNALFSHELIMIS*LHNDTTIKTSNDVS Trigger: GCTGACGTCATTGCTGGTTTTGATGGTGGTGTCATTGTGGAGCAAGGAAATCATGATGAGCTCATGAGAGAAAAGGGCATTTACTTCAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000199955.5 |
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| 3UTR CAA 90 bp | AGCAATCTTCCCAGAGATCTCAAGCTGTTTCTTGTCCTTCAAGGCTaGGCCAGACAACAGCTTCATTTCAATAATTCCGCCCAATACAAT | + |
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Preference number: 2 (lower is better) Translates to: SNLPRDLKLFLVLQG*ARQQLHFNNSAQYN Trigger: ATTGTATTGGGCGGAATTATTGAAATGAAGCTGTTGTCTGGCCAAGCCTTGAAGGACAAGAAACAGCTTGAGATCTCTGGGAAGATTGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199955.5 |
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| 3UTR-3UTR TCA 90 bp | CTCCCGAGTCAAAGAGACAATAGTGCGGAAGTTTTCAATTGCTTCTGTAGCAATCTCATGAGCTCATCATaGTTTCCTTGCTCCACAATG | + |
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Preference number: 2 (lower is better) Translates to: LPSQRDNSAEVFNCFCSNLMSSS*FPCSTM Trigger: CATTGTGGAGCAAGGAAATCATGATGAGCTCATGAG...ATTGCTACAGAAGCAATTGAAAACTTCCGCACTATTGTCTCTTTGACTCGGGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199955.5 |
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| 3UTR-3UTR CCA 90 bp | CTCCCGAGTCAAAGAGACAATAGTGCGGAAGTTTTCAATTGCTTCTGTAGCAATAGGTTTGCTACATTCTaGGTAACTACAGCAAGCCTG | + |
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Preference number: 2 (lower is better) Translates to: LPSQRDNSAEVFNCFCSNRFATF*VTTASL Trigger: CAGGCTTGCTGTAGTTACCCAGAATGTAGCAAACCT...ATTGCTACAGAAGCAATTGAAAACTTCCGCACTATTGTCTCTTTGACTCGGGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199955.5 |
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| 3UTR CAA 90 bp | TCAATTGCTTCTGTAGCAATCTTCCCAGAGATCTCAAGCTGTTTCTaGTCCTTCAAGGCTTGGCCAGACAACAGCTTCATTTCAATAATT | + |
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Preference number: 2 (lower is better) Translates to: SIASVAIFPEISSCF*SFKAWPDNSFISII Trigger: AATTATTGAAATGAAGCTGTTGTCTGGCCAAGCCTTGAAGGACAAGAAACAGCTTGAGATCTCTGGGAAGATTGCTACAGAAGCAATTGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199955.5 |
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| 3UTR-3UTR TCA 90 bp | TTTGTCACCAATTCCGTCATTAATTTTGGAGACATCATCTGTGAGCCGGGTGTTAACCAGCCTATCTCCTaGTTCATTATAGCATGGAAA | + |
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Preference number: 2 (lower is better) Translates to: FVTNSVINFGDIICEPGVNQPIS*FIIAWK Trigger: TTTCCATGCTATAATGAATCAGGAGATAGGCTGGTT...AACACCCGGCTCACAGATGATGTCTCCAAAATTAATGACGGAATTGGTGACAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000196580.5 ENSMUST00000199955.5 |
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| 3UTR-3UTR TCA 90 bp | TGGTCATCGAACCAGCTTATATCCTGTCTCAGCATGGATTTGAAAACCATGTATAACCAGCCTATCTCCTaGTTCATTATAGCATGGAAA | + |
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Preference number: 2 (lower is better) Translates to: WSSNQLISCLSMDLKTMYNQPIS*FIIAWK Trigger: TTTCCATGCTATAATGAATCAGGAGATAGGCTGGTT...ATACATGGTTTTCAAATCCATGCTGAGACAGGATATAAGCTGGTTCGATGACCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199955.5 |
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| 3UTR-3UTR GCA 90 bp | TCCTGGTTCAATTTCATTTCCTCTAGTCTGTGTCATGACAAGTTTGAAGTAAATGACTTCTTCAGCAACTaGTCCAGCTTTTGCATAAGC | + |
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Preference number: 2 (lower is better) Translates to: SWFNFISSSLCHDKFEVNDFFSN*SSFCIS Trigger: GCTTATGCAAAAGCTGGAGCAGTTGCTGAAGAAGTC...ATTTACTTCAAACTTGTCATGACACAGACTAGAGGAAATGAAATTGAACCAGGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199955.5 |
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| 3UTR CCA 72 bp | GAGAGGATGACTCCTGTCCCGAGGTTTGCTACATTCTaGGTAACTACAGCAAGCCTGGCGCCCATCGCCCCT | + |
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Preference number: 3 (lower is better) Translates to: ERMTPVPRFATF*VTTASLAPIAP Trigger: AGGGGCGATGGGCGCCAGGCTTGCTGTAGTTACCCAGAATGTAGCAAACCTCGGGACAGGAGTCATCCTCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199955.5 |
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| 3UTR-3UTR CAA 90 bp | TCTCTAGCCTTATCCAGTGCGGCCTGCACCACAGCTTCACTTTCTGTATCCAGGTCTGTGAGCCGGGTGTaGAGCTCCCCAACATCATGC | + |
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Preference number: 3 (lower is better) Translates to: SLALSSAACTTASLSVSRSVSRV*SSPTSC Trigger: GCATGATGTTGGGGAGCTCAACACCCGGCTCACAGA...CCTGGATACAGAAAGTGAAGCTGTGGTGCAGGCCGCACTGGATAAGGCTAGAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199955.5 |
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| 3UTR CCA 72 bp | GCGAGCCTGGTGGTCAGTGAGCCAGTGCTGTTCTTATaGTCATCGAACCAGCTTATATCCTGTCTCAGCATG | + |
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Preference number: 3 (lower is better) Translates to: ASLVVSEPVLFL*SSNQLISCLSM Trigger: CATGCTGAGACAGGATATAAGCTGGTTCGATGACCATAAGAACAGCACTGGCTCACTGACCACCAGGCTCGC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199955.5 |
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| 3UTR-3UTR CAA 90 bp | CTAGCCTTATCCAGTGCGGCCTGCACCACAGCTTCACTTTCTGTATCCAGGGCTGTTTGTAGCCCTTTGTaGAGAAGCTGTCAATGCTTG | + |
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Preference number: 3 (lower is better) Translates to: LALSSAACTTASLSVSRAVCSPL*RSCQCL Trigger: CAAGCATTGACAGCTTCTCAACAAAGGGCTACAAAC...AGCCCTGGATACAGAAAGTGAAGCTGTGGTGCAGGCCGCACTGGATAAGGCTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199955.5 |
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| 3UTR GCA 72 bp | GGCCTGGGTGAAGGAGAACGTGATCCCAAACACGTGTaGTTTCTTCATCGCATTTCTGTATGGTACCTGCAA | + |
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Preference number: 3 (lower is better) Translates to: GLGEGERDPKHV*FLHRISVWYLQ Trigger: TTGCAGGTACCATACAGAAATGCGATGAAGAAAGCACACGTGTTTGGGATCACGTTCTCCTTCACCCAGGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199955.5 |
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| 3UTR TCA 72 bp | GTTCCTTCTGTTGTCCTCCAAAGGCAATCACAGTTCTaGTGGCTGCTAAGACTTCTTCAGCAACTGCTCCAG | + |
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Preference number: 3 (lower is better) Translates to: VPSVVLQRQSQF*WLLRLLQQLLQ Trigger: CTGGAGCAGTTGCTGAAGAAGTCTTAGCAGCCATCAGAACTGTGATTGCCTTTGGAGGACAACAGAAGGAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199955.5 |
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| 3UTR-3UTR CAA 90 bp | GAGACATCATCTGTGAGCCGGGTGTTGAGCTCCCCAACATCATGCACATCAAACAACTTCTGCCTAATCTaGTGTATCTGTCTTCCAGCT | + |
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Preference number: 3 (lower is better) Translates to: ETSSVSRVLSSPTSCTSNNFCLI*CICLPA Trigger: AGCTGGAAGACAGATACACAAGATTAGGCAGAAGTT...GTTTGATGTGCATGATGTTGGGGAGCTCAACACCCGGCTCACAGATGATGTCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000196580.5 ENSMUST00000199955.5 |
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| 3UTR GCA 72 bp | TATCTTGAAGATTTCAAAGGCTGCCCCTCGTGCGTTTaGAAAGGCTTCTATGTTTGGGGCCAAGTGTCCAAT | + |
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Preference number: 3 (lower is better) Translates to: YLEDFKGCPSCV*KGFYVWGQVSN Trigger: ATTGGACACTTGGCCCCAAACATAGAAGCCTTTGCAAACGCACGAGGGGCAGCCTTTGAAATCTTCAAGATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000199955.5 |
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| 3UTR GCA 72 bp | ACCTGCAAGCTCTGGGCATACATGGTTTCAAACTTCTaGTCCCGAGTCAAAGAGACAATAGTGCGGAAGTTT | + |
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Preference number: 3 (lower is better) Translates to: TCKLWAYMVSNF*SRVKETIVRKF Trigger: AAACTTCCGCACTATTGTCTCTTTGACTCGGGAGCAGAAGTTTGAAACCATGTATGCCCAGAGCTTGCAGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199955.5 |
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| 3UTR GCA 72 bp | ATCAATTATCTTGAAGATTTCAAAGGCTGCCCCTCGTaGGTTTGCAAAGGCTTCTATGTTTGGGGCCAAGTG | + |
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Preference number: 3 (lower is better) Translates to: INYLEDFKGCPS*VCKGFYVWGQV Trigger: CACTTGGCCCCAAACATAGAAGCCTTTGCAAACGCACGAGGGGCAGCCTTTGAAATCTTCAAGATAATTGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000199955.5 |
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| 3UTR CCA 72 bp | CATTTCTGTATGGTACCTGCAAGCTCTGGGCATACATaGTTTCAAACTTCTGCTCCCGAGTCAAAGAGACAA | + |
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Preference number: 3 (lower is better) Translates to: HFCMVPASSGHT*FQTSAPESKRQ Trigger: TTGTCTCTTTGACTCGGGAGCAGAAGTTTGAAACCATGTATGCCCAGAGCTTGCAGGTACCATACAGAAATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199955.5 |
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| 3UTR CCA 72 bp | CCCAAACACGTGTGCTTTCTTCATCGCATTTCTGTATaGTACCTGCAAGCTCTGGGCATACATGGTTTCAAA | + |
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Preference number: 3 (lower is better) Translates to: PKHVCFLHRISV*YLQALGIHGFK Trigger: TTTGAAACCATGTATGCCCAGAGCTTGCAGGTACCATACAGAAATGCGATGAAGAAAGCACACGTGTTTGGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199955.5 |
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| 3UTR-3UTR CAA 90 bp | CTTTCAAGTTCCTTCTGTTGTCCTCCAAAGGCAATCACAGTTCTGATGGCTGCTAACTTCTGCCTAATCTaGTGTATCTGTCTTCCAGCT | + |
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Preference number: 3 (lower is better) Translates to: LSSSFCCPPKAITVLMAANFCLI*CICLPA Trigger: AGCTGGAAGACAGATACACAAGATTAGGCAGAAGTT...AGCAGCCATCAGAACTGTGATTGCCTTTGGAGGACAACAGAAGGAACTTGAAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199955.5 |
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| 3UTR-3UTR CAA 90 bp | CTCCCGAGTCAAAGAGACAATAGTGCGGAAGTTTTCAATTGCTTCTGTAGCAATCAAAGGCTTCTATGTTaGGGGCCAAGTGTCCAATAC | + |
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Preference number: 3 (lower is better) Translates to: LPSQRDNSAEVFNCFCSNQRLLC*GPSVQY Trigger: GTATTGGACACTTGGCCCCAAACATAGAAGCCTTTG...ATTGCTACAGAAGCAATTGAAAACTTCCGCACTATTGTCTCTTTGACTCGGGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000199955.5 |
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| 3UTR TCA 72 bp | AGAAGCTGTCAATGCTTGGCTCGTTATCAATTATCTTaGAGATTTCAAAGGCTGCCCCTCGTGCGTTTGCAA | + |
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Preference number: 3 (lower is better) Translates to: RSCQCLARYQLS*RFQRLPLVRLQ Trigger: TTGCAAACGCACGAGGGGCAGCCTTTGAAATCTTCAAGATAATTGATAACGAGCCAAGCATTGACAGCTTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199955.5 |
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| 3UTR GCA 72 bp | TGGCTCGTTATCAATTATCTTGAAGATTTCAAAGGCTaGCCCTCGTGCGTTTGCAAAGGCTTCTATGTTTGG | + |
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Preference number: 3 (lower is better) Translates to: WLVINYLEDFKG*PSCVCKGFYVW Trigger: CCAAACATAGAAGCCTTTGCAAACGCACGAGGGGCAGCCTTTGAAATCTTCAAGATAATTGATAACGAGCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199955.5 |
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| 3UTR TCA 72 bp | GAAGACAGTAAGCACTTCTCCAATAGAATATTCATTTaGGAGGACCAAGGATGTCCCATACCAGAATGCCAG | + |
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Preference number: 3 (lower is better) Translates to: EDSKHFSNRIFI*EDQGCPIPECQ Trigger: CTGGCATTCTGGTATGGGACATCCTTGGTCCTCTCAAATGAATATTCTATTGGAGAAGTGCTTACTGTCTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199955.5 |
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| 3UTR TCA 72 bp | GTTTCCCATTATACTGTCTGGTTTGTAGCCCTTTGTTaGGAAGCTGTCAATGCTTGGCTCGTTATCAATTAT | + |
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Preference number: 3 (lower is better) Translates to: VSHYTVWFVALC*EAVNAWLVINY Trigger: ATAATTGATAACGAGCCAAGCATTGACAGCTTCTCAACAAAGGGCTACAAACCAGACAGTATAATGGGAAAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199955.5 |
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| 3UTR CCA 72 bp | CACTTCTGTAAATTGATCTCCTTATTAAAGGTGATTTaGATTCTTCTGAAGTCAGTTCAGAAGCATCAGTGT | + |
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Preference number: 3 (lower is better) Translates to: HFCKLISLLKVI*ILLKSVQKHQC Trigger: ACACTGATGCTTCTGAACTGACTTCAGAAGAATCCAAATCACCTTTAATAAGGAGATCAATTTACAGAAGTG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199955.5 |
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| CDS-3UTR CCA 90 bp | CAAAGTCTCGGAAGGCTTCTCATCTTGATGGAGTTACCTTTAACAGCCCTTGCCCATCACTGGCGAGCCTaGTGGTCAGTGAGCCAGTGC | + |
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Preference number: 4 (lower is better) Translates to: QSLGRLLILMELPLTALAHHWRA*WSVSQC Trigger: GCACTGGCTCACTGACCACCAGGCTCGCCAGTGATG...GGCAAGGGCTGTTAAAGGTAACTCCATCAAGATGAGAAGCCTTCCGAGACTTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009058.10 |
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| CDS-3UTR TCA 90 bp | CAAAGTCTCGGAAGGCTTCTCATCTTGATGGAGTTACCTTTAACAGCCCTTGCCAAATGTGAGGCTGTCTaGCGAGGGCACGTGCGATGG | + |
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Preference number: 4 (lower is better) Translates to: QSLGRLLILMELPLTALAKCEAV*RGHVRW Trigger: CCATCGCACGTGCCCTCGTCAGACAGCCTCACATTT...GGCAAGGGCTGTTAAAGGTAACTCCATCAAGATGAGAAGCCTTCCGAGACTTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009058.10 |
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| CDS-3UTR GCA 90 bp | CAAAGTCTCGGAAGGCTTCTCATCTTGATGGAGTTACCTTTAACAGCCCTTGCCGTTGGCCTCCTTGGCTaGCCTCACAATCTCCTCATG | + |
|
Preference number: 4 (lower is better) Translates to: QSLGRLLILMELPLTALAVGLLG*PHNLLM Trigger: CATGAGGAGATTGTGAGGGCAGCCAAGGAGGCCAAC...GGCAAGGGCTGTTAAAGGTAACTCCATCAAGATGAGAAGCCTTCCGAGACTTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009058.10 |
||
| CDS-3UTR GCA 90 bp | CAAAGTCTCGGAAGGCTTCTCATCTTGATGGAGTTACCTTTAACAGCCCTTGCCCACCCGACAGCTGAGTaGCTTTGTCTCCTACTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: QSLGRLLILMELPLTALAHPTAE*LCLLLW Trigger: CCAGAGTAGGAGACAAAGGCACTCAGCTGTCGGGTG...GGCAAGGGCTGTTAAAGGTAACTCCATCAAGATGAGAAGCCTTCCGAGACTTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009058.10 |
||
| CDS-3UTR TCA 90 bp | CAAAGTCTCGGAAGGCTTCTCATCTTGATGGAGTTACCTTTAACAGCCCTTGCCTCCAGCCTGGACCATTaGGAAGTAGATGCCCTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: QSLGRLLILMELPLTALASSLDH*EVDALL Trigger: CAGAAGGGCATCTACTTCTCAATGGTCCAGGCTGGA...GGCAAGGGCTGTTAAAGGTAACTCCATCAAGATGAGAAGCCTTCCGAGACTTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009058.10 |
||
| CDS-3UTR GCA 90 bp | CAAAGTCTCGGAAGGCTTCTCATCTTGATGGAGTTACCTTTAACAGCCCTTGCCGCTTCAAGCCCTCTGTaGTGTAGCTGTCAATCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: QSLGRLLILMELPLTALAASSPL*CSCQSQ Trigger: CTGAGATTGACAGCTACAGCACAGAGGGCTTGAAGC...GGCAAGGGCTGTTAAAGGTAACTCCATCAAGATGAGAAGCCTTCCGAGACTTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009058.10 |
||
| CDS-3UTR CCA 90 bp | CTAGCCTTATCCAGTGCGGCCTGCACCACAGCTTCACTTTCTGTATCCAGGGCTTTGATTAGTAATGCTTaGCAGAATACTGGCTTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LALSSAACTTASLSVSRALISNA*QNTGFC Trigger: GCAGAAGCCAGTATTCTGCCAAGCATTACTAATCAA...AGCCCTGGATACAGAAAGTGAAGCTGTGGTGCAGGCCGCACTGGATAAGGCTAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199955.5 |
||
| CDS-3UTR TCA 90 bp | TCTCATCTTGATGGAGTTACCTTTAACAGCCCTTGCCTTTTAACTTTGGTTTGGTGCCCACCCGACAGCTaGGTGCCTTTGTCTCCTACT | + |
|
Preference number: 4 (lower is better) Translates to: SHLDGVTFNSPCLLTLVWCPPDS*VPLSPT Trigger: AGTAGGAGACAAAGGCACTCAGCTGTCGGGTGGGCA...CCAAACCAAAGTTAAAAGGCAAGGGCTGTTAAAGGTAACTCCATCAAGATGAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009058.10 |
||
| CDS-3UTR GCA 90 bp | CAAAGTCTCGGAAGGCTTCTCATCTTGATGGAGTTACCTTTAACAGCCCTTGCCAGCTCCCCAACATCATaGACATCAAACCAGCCTATC | + |
|
Preference number: 4 (lower is better) Translates to: QSLGRLLILMELPLTALASSPTS*TSNQPI Trigger: GATAGGCTGGTTTGATGTGCATGATGTTGGGGAGCT...GGCAAGGGCTGTTAAAGGTAACTCCATCAAGATGAGAAGCCTTCCGAGACTTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009058.10 |
||
| CDS-3UTR CCA 90 bp | CTTGATGGAGTTACCTTTAACAGCCCTTGCCTTTTAACTTTGGTTTGGTGCCATGGATGTTGGCCTCCTTaGCTGCCCTCACAATCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LDGVTFNSPCLLTLVWCHGCWPP*LPSQSP Trigger: AGGAGATTGTGAGGGCAGCCAAGGAGGCCAACATCC...ATGGCACCAAACCAAAGTTAAAAGGCAAGGGCTGTTAAAGGTAACTCCATCAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009058.10 |
||
| CDS-3UTR TCA 90 bp | CTTGATGGAGTTACCTTTAACAGCCCTTGCCTTTTAACTTTGGTTTGGTGCCATGGATGTAGGCAACTATaGGCACACCAGCACCAATCC | + |
|
Preference number: 4 (lower is better) Translates to: LDGVTFNSPCLLTLVWCHGCRQL*AHQHQS Trigger: GGATTGGTGCTGGTGTGCTCATAGTTGCCTACATCC...ATGGCACCAAACCAAAGTTAAAAGGCAAGGGCTGTTAAAGGTAACTCCATCAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009058.10 |
||
| CDS-3UTR TCA 90 bp | CAAAGTCTCGGAAGGCTTCTCATCTTGATGGAGTTACCTTTAACAGCCCTTGCCGAATGCCAGTGCATATaGTGCATAGACCAACAGGTA | + |
|
Preference number: 4 (lower is better) Translates to: QSLGRLLILMELPLTALAECQCI*CIDQQV Trigger: TACCTGTTGGTCTATGCATCATATGCACTGGCATTC...GGCAAGGGCTGTTAAAGGTAACTCCATCAAGATGAGAAGCCTTCCGAGACTTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009058.10 |
||
| CDS-3UTR TCA 90 bp | TCTCATCTTGATGGAGTTACCTTTAACAGCCCTTGCCTTTTAACTTTGGTTTGGGAGCCTGGTGGTCAGTaGGCCAGTGCTGTTCTTATG | + |
|
Preference number: 4 (lower is better) Translates to: SHLDGVTFNSPCLLTLVWEPGGQ*ASAVLM Trigger: CATAAGAACAGCACTGGCTCACTGACCACCAGGCTC...CCAAACCAAAGTTAAAAGGCAAGGGCTGTTAAAGGTAACTCCATCAAGATGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009058.10 |
||
| CDS-3UTR GCA 90 bp | TGTGAGCCGGGTGTTGAGCTCCCCAACATCATGCACATCAAACCAGCCTATCTCCCTTTTTACTCTTTTTaGCCATCTTCGAGAAGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: CEPGVELPNIMHIKPAYLPFYSF*PSSRSS Trigger: AGAACTTCTCGAAGATGGGCAAAAAGAGTAAAAAGG...GAGATAGGCTGGTTTGATGTGCATGATGTTGGGGAGCTCAACACCCGGCTCACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000196580.5 ENSMUST00000199955.5 |
||
| CDS-3UTR GCA 90 bp | GAGCCGGGTGTTGAGCTCCCCAACATCATGCACATCAAACCAGCCTATCTCCTGCAGAATACTGGCTTCTaGTTTTGTAAAACTATCTGT | + |
|
Preference number: 4 (lower is better) Translates to: EPGVELPNIMHIKPAYLLQNTGF*FCKTIC Trigger: ACAGATAGTTTTACAAAAGCAGAAGCCAGTATTCTG...CAGGAGATAGGCTGGTTTGATGTGCATGATGTTGGGGAGCTCAACACCCGGCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000196580.5 ENSMUST00000199955.5 |
||
| CDS-3UTR GCA 90 bp | CAAAGTCTCGGAAGGCTTCTCATCTTGATGGAGTTACCTTTAACAGCCCTTGCCCTTCTCTCTTGGTCTTaGTTTCTGTGGACACTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: QSLGRLLILMELPLTALALLSWS*FLWTLL Trigger: CAGAAGTGTCCACAGAAAGCAAGACCAAGAGAGAAG...GGCAAGGGCTGTTAAAGGTAACTCCATCAAGATGAGAAGCCTTCCGAGACTTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009058.10 |
||
| CDS-3UTR GCA 90 bp | CAAAGTCTCGGAAGGCTTCTCATCTTGATGGAGTTACCTTTAACAGCCCTTGCCTTTCTGTATGGTACCTaGAAGCTCTGGGCATACATG | + |
|
Preference number: 4 (lower is better) Translates to: QSLGRLLILMELPLTALAFLYGT*KLWAYM Trigger: CATGTATGCCCAGAGCTTGCAGGTACCATACAGAAA...GGCAAGGGCTGTTAAAGGTAACTCCATCAAGATGAGAAGCCTTCCGAGACTTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009058.10 |
||
| CDS-3UTR CCA 90 bp | CAAAGTCTCGGAAGGCTTCTCATCTTGATGGAGTTACCTTTAACAGCCCTTGCCTTGTCCAGCGCTTCCTaGACAACCTTTTCACTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: QSLGRLLILMELPLTALALSSAS*TTFSLS Trigger: AGAAAGTGAAAAGGTTGTCCAGGAAGCGCTGGACAA...GGCAAGGGCTGTTAAAGGTAACTCCATCAAGATGAGAAGCCTTCCGAGACTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009058.10 |
||
| 3UTR CAA 72 bp | TCATTAATTTTGGAGACATCATCTGTGAGCCGGGTGTaGAGCTCCCCAACATCATGCACATCAAACCAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: SLILETSSVSRV*SSPTSCTSNQP Trigger: AGGCTGGTTTGATGTGCATGATGTTGGGGAGCTCAACACCCGGCTCACAGATGATGTCTCCAAAATTAATGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000196580.5 ENSMUST00000199955.5 |
||
| 3UTR CAA 72 bp | CCCAGAGATCTCAAGCTGTTTCTTGTCCTTCAAGGCTaGGCCAGACAACAGCTTCATTTCAATAATTCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: PRDLKLFLVLQG*ARQQLHFNNSA Trigger: GGCGGAATTATTGAAATGAAGCTGTTGTCTGGCCAAGCCTTGAAGGACAAGAAACAGCTTGAGATCTCTGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199955.5 |
||
| CDS-3UTR TCA 90 bp | TCTCATCTTGATGGAGTTACCTTTAACAGCCCTTGCCTTTTAACTTTGGTTTGGAGGCCCTTCAAGATCTaGACTTCGCTTCTCGATGGG | + |
|
Preference number: 4 (lower is better) Translates to: SHLDGVTFNSPCLLTLVWRPFKI*TSLLDG Trigger: CCCATCGAGAAGCGAAGTTCAGATCTTGAAGGGCCT...CCAAACCAAAGTTAAAAGGCAAGGGCTGTTAAAGGTAACTCCATCAAGATGAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009058.10 |
||
| CDS-3UTR GCA 90 bp | CAAAGTCTCGGAAGGCTTCTCATCTTGATGGAGTTACCTTTAACAGCCCTTGCCGATCCCAAACACGTGTaGTTTCTTCATCGCATTTCT | + |
|
Preference number: 4 (lower is better) Translates to: QSLGRLLILMELPLTALADPKHV*FLHRIS Trigger: AGAAATGCGATGAAGAAAGCACACGTGTTTGGGATC...GGCAAGGGCTGTTAAAGGTAACTCCATCAAGATGAGAAGCCTTCCGAGACTTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009058.10 |
||
| CDS-3UTR CCA 90 bp | TCACGTAATGCAATTAAAAACATGGCCCTGTTTAACTATGGCTTGTTTGTTTGTCACTGGCGAGCCTGGTaGTCAGTGAGCCAGTGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: SRNAIKNMALFNYGLFVCHWRAW*SVSQCC Trigger: ACAGCACTGGCTCACTGACCACCAGGCTCGCCAGTG...ACAAACAAACAAGCCATAGTTAAACAGGGCCATGTTTTTAATTGCATTACGTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000009058.10 |
||
| 3UTR CAA 72 bp | GAGAAGCTGTCAATGCTTGGCTCGTTATCAATTATCTaGAAGATTTCAAAGGCTGCCCCTCGTGCGTTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: EKLSMLGSLSII*KISKAAPRAFA Trigger: TGCAAACGCACGAGGGGCAGCCTTTGAAATCTTCAAGATAATTGATAACGAGCCAAGCATTGACAGCTTCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199955.5 |
||
| 3UTR CAA 72 bp | TCTGTAGCAATCTTCCCAGAGATCTCAAGCTGTTTCTaGTCCTTCAAGGCTTGGCCAGACAACAGCTTCATT | + |
|
Preference number: 4 (lower is better) Translates to: SVAIFPEISSCF*SFKAWPDNSFI Trigger: AATGAAGCTGTTGTCTGGCCAAGCCTTGAAGGACAAGAAACAGCTTGAGATCTCTGGGAAGATTGCTACAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199955.5 |
||
| CDS-3UTR TCA 90 bp | CTTGATGGAGTTACCTTTAACAGCCCTTGCCTTTTAACTTTGGTTTGGTGCCATTGCCCACAAAGCAGATaGCAATCCAATAAGAGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: LDGVTFNSPCLLTLVWCHCPQSR*QSNKRA Trigger: AGCCCTCTTATTGGATTGTCATCTGCTTTGTGGGCA...ATGGCACCAAACCAAAGTTAAAAGGCAAGGGCTGTTAAAGGTAACTCCATCAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009058.10 |
||
| CDS-3UTR TCA 90 bp | TCACGTAATGCAATTAAAAACATGGCCCTGTTTAACTATGGCTTGTTTGTTTGTCTCACAATCTCCTCATaGGACACGGCCCGGCTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: SRNAIKNMALFNYGLFVCLTISS*DTARLL Trigger: CAACAGCCGGGCCGTGTCTCATGAGGAGATTGTGAG...ACAAACAAACAAGCCATAGTTAAACAGGGCCATGTTTTTAATTGCATTACGTGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000009058.10 |
||
| CDS-3UTR GCA 90 bp | GTTGAGCTCCCCAACATCATGCACATCAAACCAGCCTATCTCCTGATTCATTATCTTGTCCAGCCAATCTaGATAGCGAAACATCCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: VELPNIMHIKPAYLLIHYLVQPI*IAKHPK Trigger: TTTGGGATGTTTCGCTATGCAGATTGGCTGGACAAG...ATAATGAATCAGGAGATAGGCTGGTTTGATGTGCATGATGTTGGGGAGCTCAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000196580.5 ENSMUST00000199955.5 |
||
| CDS-3UTR GCA 90 bp | CTTGATGGAGTTACCTTTAACAGCCCTTGCCTTTTAACTTTGGTTTGGTGCCATTGGTCAGTGAGCCAGTaGTGTTCTTATGGTCATCGA | + |
|
Preference number: 4 (lower is better) Translates to: LDGVTFNSPCLLTLVWCHWSVSQ*CSYGHR Trigger: TCGATGACCATAAGAACAGCACTGGCTCACTGACCA...ATGGCACCAAACCAAAGTTAAAAGGCAAGGGCTGTTAAAGGTAACTCCATCAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009058.10 |
||
| CDS-3UTR GCA 90 bp | CTTGATGGAGTTACCTTTAACAGCCCTTGCCTTTTAACTTTGGTTTGGTGCCATAGTCATGAGTTGTTGTaGCACCAAGTAGGCACCGAA | + |
|
Preference number: 4 (lower is better) Translates to: LDGVTFNSPCLLTLVWCHSHELL*HQVGTE Trigger: TTCGGTGCCTACTTGGTGGCACAACAACTCATGACT...ATGGCACCAAACCAAAGTTAAAAGGCAAGGGCTGTTAAAGGTAACTCCATCAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009058.10 |
||
| CDS-3UTR CCA 90 bp | CTTGATGGAGTTACCTTTAACAGCCCTTGCCTTTTAACTTTGGTTTGGTGCCATACCAGGGTGTCAAATTaGTGGGGCAGTTTCATGATG | + |
|
Preference number: 4 (lower is better) Translates to: LDGVTFNSPCLLTLVWCHTRVSN*WGSFMM Trigger: CATCATGAAACTGCCCCACCAATTTGACACCCTGGT...ATGGCACCAAACCAAAGTTAAAAGGCAAGGGCTGTTAAAGGTAACTCCATCAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000009058.10 |
||
| CDS-3UTR CCA 90 bp | CTTGATGGAGTTACCTTTAACAGCCCTTGCCTTTTAACTTTGGTTTGGTGCCATAGCTCTGGGCATACATaGTTTCAAACTTCTGCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: LDGVTFNSPCLLTLVWCHSSGHT*FQTSAP Trigger: GGGAGCAGAAGTTTGAAACCATGTATGCCCAGAGCT...ATGGCACCAAACCAAAGTTAAAAGGCAAGGGCTGTTAAAGGTAACTCCATCAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009058.10 |
||
| CDS-3UTR CCA 90 bp | TCTCATCTTGATGGAGTTACCTTTAACAGCCCTTGCCTTTTAACTTTGGTTTGGAGTGAGTCGATGAACTaGTGGATGTTGGCCTCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: SHLDGVTFNSPCLLTLVWSESMN*WMLASL Trigger: CAAGGAGGCCAACATCCACCAGTTCATCGACTCACT...CCAAACCAAAGTTAAAAGGCAAGGGCTGTTAAAGGTAACTCCATCAAGATGAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009058.10 |
||
| CDS-3UTR TCA 90 bp | CTTGATGGAGTTACCTTTAACAGCCCTTGCCTTTTAACTTTGGTTTGGTGCCATCTCATGAGCTCATCATaGTTTCCTTGCTCCACAATG | + |
|
Preference number: 4 (lower is better) Translates to: LDGVTFNSPCLLTLVWCHLMSSS*FPCSTM Trigger: CATTGTGGAGCAAGGAAATCATGATGAGCTCATGAG...ATGGCACCAAACCAAAGTTAAAAGGCAAGGGCTGTTAAAGGTAACTCCATCAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009058.10 |
||
| CDS-3UTR GCA 90 bp | CAAAGTCTCGGAAGGCTTCTCATCTTGATGGAGTTACCTTTAACAGCCCTTGCCCCTTTTTACTCTTTTTaGCCATCTTCGAGAAGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: QSLGRLLILMELPLTALAPFYSF*PSSRSS Trigger: AGAACTTCTCGAAGATGGGCAAAAAGAGTAAAAAGG...GGCAAGGGCTGTTAAAGGTAACTCCATCAAGATGAGAAGCCTTCCGAGACTTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000009058.10 |
||
| CDS-3UTR GCA 90 bp | TCTCATCTTGATGGAGTTACCTTTAACAGCCCTTGCCTTTTAACTTTGGTTTGGACTAGTATTCCCAGCTaGCATGGCACCAAAGACAAC | + |
|
Preference number: 4 (lower is better) Translates to: SHLDGVTFNSPCLLTLVWTSIPS*HGTKDN Trigger: GTTGTCTTTGGTGCCATGGCAGCTGGGAATACTAGT...CCAAACCAAAGTTAAAAGGCAAGGGCTGTTAAAGGTAACTCCATCAAGATGAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009058.10 |
||
| CDS-3UTR GCA 90 bp | CTTGATGGAGTTACCTTTAACAGCCCTTGCCTTTTAACTTTGGTTTGGTGCCATCGATGTTCTCTGCAATaGTGCAGTCAAAGAGAATGG | + |
|
Preference number: 4 (lower is better) Translates to: LDGVTFNSPCLLTLVWCHRCSLQ*CSQREW Trigger: CCATTCTCTTTGACTGCAGCATTGCAGAGAACATCG...ATGGCACCAAACCAAAGTTAAAAGGCAAGGGCTGTTAAAGGTAACTCCATCAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009058.10 |
||
| CDS-3UTR CCA 90 bp | CTTGATGGAGTTACCTTTAACAGCCCTTGCCTTTTAACTTTGGTTTGGTGCCATAATAGTAGGCGTATATaGCCATCTCTTCCTCCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: LDGVTFNSPCLLTLVWCHNSRRI*PSLPPD Trigger: GTCTGGAGGAAGAGATGGCCATATACGCCTACTATT...ATGGCACCAAACCAAAGTTAAAAGGCAAGGGCTGTTAAAGGTAACTCCATCAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009058.10 |
||
| CDS-3UTR CCA 90 bp | CTTGATGGAGTTACCTTTAACAGCCCTTGCCTTTTAACTTTGGTTTGGTGCCATGAGATGCTGATACTTTaGCTTTCGCATAGTCAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: LDGVTFNSPCLLTLVWCHEMLIL*LSHSQE Trigger: CTCCTGACTATGCGAAAGCCAAAGTATCAGCATCTC...ATGGCACCAAACCAAAGTTAAAAGGCAAGGGCTGTTAAAGGTAACTCCATCAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009058.10 |
||
| 3UTR CAA 72 bp | AATGCCCTTTTCTCTCATGAGCTCATCATGATTTCCTaGCTCCACAATGACACCACCATCAAAACCAGCAAT | + |
|
Preference number: 4 (lower is better) Translates to: NALFSHELIMIS*LHNDTTIKTSN Trigger: ATTGCTGGTTTTGATGGTGGTGTCATTGTGGAGCAAGGAAATCATGATGAGCTCATGAGAGAAAAGGGCATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000199955.5 |
||
| CDS-3UTR TCA 90 bp | TCTCATCTTGATGGAGTTACCTTTAACAGCCCTTGCCTTTTAACTTTGGTTTGGCTGTTGGGTCCACTTTaGTTAGTAATGCTTGGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: SHLDGVTFNSPCLLTLVWLLGPL*LVMLGR Trigger: TCTGCCAAGCATTACTAATCAAAGTGGACCCAACAG...CCAAACCAAAGTTAAAAGGCAAGGGCTGTTAAAGGTAACTCCATCAAGATGAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009058.10 |
||
| CDS-3UTR TCA 90 bp | TGTTTGTTTCCGATTTTGGTTCATTTAATTACAAAGTCTCGGAAGGCTTCTCATTGCCAGGCACCAAAGTaGAACCTGGATGTAGGCAAC | + |
|
Preference number: 4 (lower is better) Translates to: CLFPILVHLITKSRKASHCQAPK*NLDVGN Trigger: GTTGCCTACATCCAGGTTTCACTTTGGTGCCTGGCA...ATGAGAAGCCTTCCGAGACTTTGTAATTAAATGAACCAAAATCGGAAACAAACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009058.10 |
||
| CDS-3UTR TCA 90 bp | CACGTAATGCAATTAAAAACATGGCCCTGTTTAACTATGGCTTGTTTGTTTGTTAGACTAAGGAGAGGATaGCTCCTGTCCCGAGGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: HVMQLKTWPCLTMACLFVRLRRG*LLSRGL Trigger: CAAACCTCGGGACAGGAGTCATCCTCTCCTTAGTCT...AACAAACAAACAAGCCATAGTTAAACAGGGCCATGTTTTTAATTGCATTACGTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000009058.10 |
||
| CDS-3UTR GCA 90 bp | TCTCATCTTGATGGAGTTACCTTTAACAGCCCTTGCCTTTTAACTTTGGTTTGGCTTGTCCAGCCAATCTaGATAGCGAAACATCCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: SHLDGVTFNSPCLLTLVWLVQPI*IAKHPK Trigger: TTTGGGATGTTTCGCTATGCAGATTGGCTGGACAAG...CCAAACCAAAGTTAAAAGGCAAGGGCTGTTAAAGGTAACTCCATCAAGATGAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009058.10 |
||
| CDS-3UTR GCA 90 bp | TCTCATCTTGATGGAGTTACCTTTAACAGCCCTTGCCTTTTAACTTTGGTTTGGAACTGCTCCAGCTTTTaGATAAGCCTGGAGTTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: SHLDGVTFNSPCLLTLVWNCSSF*ISLEFL Trigger: AAGGAACTCCAGGCTTATGCAAAAGCTGGAGCAGTT...CCAAACCAAAGTTAAAAGGCAAGGGCTGTTAAAGGTAACTCCATCAAGATGAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000009058.10 |
||
| CDS-3UTR CCA 90 bp | TCTCATCTTGATGGAGTTACCTTTAACAGCCCTTGCCTTTTAACTTTGGTTTGGTTGTCCTTCAAGGCTTaGCCAGACAACAGCTTCATT | + |
|
Preference number: 4 (lower is better) Translates to: SHLDGVTFNSPCLLTLVWLSFKA*PDNSFI Trigger: AATGAAGCTGTTGTCTGGCCAAGCCTTGAAGGACAA...CCAAACCAAAGTTAAAAGGCAAGGGCTGTTAAAGGTAACTCCATCAAGATGAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009058.10 |
||
| CDS-3UTR TCA 90 bp | CTTGATGGAGTTACCTTTAACAGCCCTTGCCTTTTAACTTTGGTTTGGTGCCATAACCAGCCTATCTCCTaGTTCATTATAGCATGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: LDGVTFNSPCLLTLVWCHNQPIS*FIIAWK Trigger: TTTCCATGCTATAATGAATCAGGAGATAGGCTGGTT...ATGGCACCAAACCAAAGTTAAAAGGCAAGGGCTGTTAAAGGTAACTCCATCAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009058.10 |
||
| CDS-3UTR TCA 90 bp | CTTGATGGAGTTACCTTTAACAGCCCTTGCCTTTTAACTTTGGTTTGGTGCCATAACCCCTACAATCCTTaGAAATACTATGGCAAACAC | + |
|
Preference number: 4 (lower is better) Translates to: LDGVTFNSPCLLTLVWCHNPYNP*KYYGKH Trigger: GTGTTTGCCATAGTATTTTCAAGGATTGTAGGGGTT...ATGGCACCAAACCAAAGTTAAAAGGCAAGGGCTGTTAAAGGTAACTCCATCAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000009058.10 |
||
| CDS-3UTR TCA 90 bp | CACGTAATGCAATTAAAAACATGGCCCTGTTTAACTATGGCTTGTTTGTTTGTTTCCAGAAGTAAAATGTaGGGCTGTCTGACGAGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: HVMQLKTWPCLTMACLFVSRSKM*GCLTRA Trigger: TGCCCTCGTCAGACAGCCTCACATTTTACTTCTGGA...AACAAACAAACAAGCCATAGTTAAACAGGGCCATGTTTTTAATTGCATTACGTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000009058.10 |
||
| CDS-3UTR GCA 90 bp | TGTTTGTTTCCGATTTTGGTTCATTTAATTACAAAGTCTCGGAAGGCTTCTCATTTATCCAGTGCGGCCTaGACCACAGCTTCACTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: CLFPILVHLITKSRKASHLSSAA*TTASLS Trigger: AGAAAGTGAAGCTGTGGTGCAGGCCGCACTGGATAA...ATGAGAAGCCTTCCGAGACTTTGTAATTAAATGAACCAAAATCGGAAACAAACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009058.10 |
||
| CDS-3UTR CCA 90 bp | ATTTTGTCACCAATTCCGTCATTAATTTTGGAGACATCATCTGTGAGCCGGGTGTTGATTAGTAATGCTTaGCAGAATACTGGCTTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: ILSPIPSLILETSSVSRVLISNA*QNTGFC Trigger: GCAGAAGCCAGTATTCTGCCAAGCATTACTAATCAA...CACCCGGCTCACAGATGATGTCTCCAAAATTAATGACGGAATTGGTGACAAAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000196580.5 ENSMUST00000199955.5 |
||
| CDS-3UTR CCA 90 bp | CACGTAATGCAATTAAAAACATGGCCCTGTTTAACTATGGCTTGTTTGTTTGTTTATTCCCAGCTGCCATaGCACCAAAGACAACAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: HVMQLKTWPCLTMACLFVYSQLP*HQRQQQ Trigger: CTGCTGTTGTCTTTGGTGCCATGGCAGCTGGGAATA...AACAAACAAACAAGCCATAGTTAAACAGGGCCATGTTTTTAATTGCATTACGTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000009058.10 |
||
| CDS-3UTR TCA 90 bp | TCTCATCTTGATGGAGTTACCTTTAACAGCCCTTGCCTTTTAACTTTGGTTTGGATGATCCTGATGATATaGGATGCTGATACTTTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: SHLDGVTFNSPCLLTLVWMILMI*DADTLA Trigger: AGCCAAAGTATCAGCATCTCATATCATCAGGATCAT...CCAAACCAAAGTTAAAAGGCAAGGGCTGTTAAAGGTAACTCCATCAAGATGAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009058.10 |
||
| CDS-3UTR GCA 90 bp | ATTTTGTCACCAATTCCGTCATTAATTTTGGAGACATCATCTGTGAGCCGGGTGCCTTTTTACTCTTTTTaGCCATCTTCGAGAAGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: ILSPIPSLILETSSVSRVPFYSF*PSSRSS Trigger: AGAACTTCTCGAAGATGGGCAAAAAGAGTAAAAAGG...CACCCGGCTCACAGATGATGTCTCCAAAATTAATGACGGAATTGGTGACAAAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000196580.5 ENSMUST00000199955.5 |
||
| CDS-3UTR GCA 90 bp | TCACGTAATGCAATTAAAAACATGGCCCTGTTTAACTATGGCTTGTTTGTTTGTTCCTGTCCCGAGGTTTaGTACATTCTGGGTAACTAC | + |
|
Preference number: 4 (lower is better) Translates to: SRNAIKNMALFNYGLFVCSCPEV*YILGNY Trigger: GTAGTTACCCAGAATGTAGCAAACCTCGGGACAGGA...ACAAACAAACAAGCCATAGTTAAACAGGGCCATGTTTTTAATTGCATTACGTGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000009058.10 |
||
| CDS-3UTR GCA 90 bp | CTTGATGGAGTTACCTTTAACAGCCCTTGCCTTTTAACTTTGGTTTGGTGCCATCACTGGACATTCAGTTaGTTTATTTCTTTGCCATCT | + |
|
Preference number: 4 (lower is better) Translates to: LDGVTFNSPCLLTLVWCHHWTFS*FISLPS Trigger: AGATGGCAAAGAAATAAAGCAACTGAATGTCCAGTG...ATGGCACCAAACCAAAGTTAAAAGGCAAGGGCTGTTAAAGGTAACTCCATCAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009058.10 |
||
| CDS-3UTR CCA 90 bp | TGTTTGTTTCCGATTTTGGTTCATTTAATTACAAAGTCTCGGAAGGCTTCTCATGGTACCTGCAAGCTCTaGGCATACATGGTTTCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: CLFPILVHLITKSRKASHGTCKL*AYMVSN Trigger: GTTTGAAACCATGTATGCCCAGAGCTTGCAGGTACC...ATGAGAAGCCTTCCGAGACTTTGTAATTAAATGAACCAAAATCGGAAACAAACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009058.10 |
||
| 3UTR CAA 72 bp | AGTTTCCCATTATACTGTCTGGTTTGTAGCCCTTTGTaGAGAAGCTGTCAATGCTTGGCTCGTTATCAATTA | + |
|
Preference number: 4 (lower is better) Translates to: SFPLYCLVCSPL*RSCQCLARYQL Trigger: TAATTGATAACGAGCCAAGCATTGACAGCTTCTCAACAAAGGGCTACAAACCAGACAGTATAATGGGAAACT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199955.5 |
||
| CDS-3UTR TCA 90 bp | CACGTAATGCAATTAAAAACATGGCCCTGTTTAACTATGGCTTGTTTGTTTGTTAGGCAATCACAGTTCTaGTGGCTGCTAAGACTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: HVMQLKTWPCLTMACLFVRQSQF*WLLRLL Trigger: AAGAAGTCTTAGCAGCCATCAGAACTGTGATTGCCT...AACAAACAAACAAGCCATAGTTAAACAGGGCCATGTTTTTAATTGCATTACGTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000009058.10 |
||
| CDS-3UTR TCA 90 bp | TCACGTAATGCAATTAAAAACATGGCCCTGTTTAACTATGGCTTGTTTGTTTGTTTTGTAGCCCTTTGTTaGGAAGCTGTCAATGCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: SRNAIKNMALFNYGLFVCFVALC*EAVNAW Trigger: CCAAGCATTGACAGCTTCTCAACAAAGGGCTACAAA...ACAAACAAACAAGCCATAGTTAAACAGGGCCATGTTTTTAATTGCATTACGTGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000009058.10 |
||
| CDS-3UTR TCA 90 bp | CACGTAATGCAATTAAAAACATGGCCCTGTTTAACTATGGCTTGTTTGTTTGTTAGGCATTGGCTTCCTTaGCAGCTTTCTCAATCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: HVMQLKTWPCLTMACLFVRHWLP*QLSQSH Trigger: ATGAGATTGAGAAAGCTGTCAAGGAAGCCAATGCCT...AACAAACAAACAAGCCATAGTTAAACAGGGCCATGTTTTTAATTGCATTACGTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000009058.10 |
||
| CDS-3UTR TCA 90 bp | TCACGTAATGCAATTAAAAACATGGCCCTGTTTAACTATGGCTTGTTTGTTTGTCATCAAAACCAGCAATaGCGTCAGCATTACGAACTG | + |
|
Preference number: 4 (lower is better) Translates to: SRNAIKNMALFNYGLFVCHQNQQ*RQHYEL Trigger: CAGTTCGTAATGCTGACGTCATTGCTGGTTTTGATG...ACAAACAAACAAGCCATAGTTAAACAGGGCCATGTTTTTAATTGCATTACGTGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000009058.10 |
||
| CDS-3UTR TCA 90 bp | TCACGTAATGCAATTAAAAACATGGCCCTGTTTAACTATGGCTTGTTTGTTTGTCGGCTTTGCCAAATGTaGAGCCCTGAAAGAAATATG | + |
|
Preference number: 4 (lower is better) Translates to: SRNAIKNMALFNYGLFVCRLCQM*SPERNM Trigger: CATATTTCTTTCAGGGCTTCACATTTGGCAAAGCCG...ACAAACAAACAAGCCATAGTTAAACAGGGCCATGTTTTTAATTGCATTACGTGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000009058.10 |
||
| CDS-3UTR TCA 90 bp | CACGTAATGCAATTAAAAACATGGCCCTGTTTAACTATGGCTTGTTTGTTTGTTATAGTCAGGAGCAAATaGACTAGTATTCCCAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: HVMQLKTWPCLTMACLFVIVRSK*TSIPSC Trigger: GCAGCTGGGAATACTAGTTCATTTGCTCCTGACTAT...AACAAACAAACAAGCCATAGTTAAACAGGGCCATGTTTTTAATTGCATTACGTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000009058.10 |
||
| CDS-3UTR GCA 90 bp | ATGGTTTCAAACTTCTGCTCCCGAGTCAAAGAGACAATAGTGCGGAAGTTTTCACAGAATACTGGCTTCTaGTTTTGTAAAACTATCTGT | + |
|
Preference number: 4 (lower is better) Translates to: MVSNFCSRVKETIVRKFSQNTGF*FCKTIC Trigger: ACAGATAGTTTTACAAAAGCAGAAGCCAGTATTCTG...TGAAAACTTCCGCACTATTGTCTCTTTGACTCGGGAGCAGAAGTTTGAAACCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000199955.5 |
||
| CDS-3UTR GCA 90 bp | TGTTTGTTTCCGATTTTGGTTCATTTAATTACAAAGTCTCGGAAGGCTTCTCATGACTTCTTCAGCAACTaGTCCAGCTTTTGCATAAGC | + |
|
Preference number: 4 (lower is better) Translates to: CLFPILVHLITKSRKASHDFFSN*SSFCIS Trigger: GCTTATGCAAAAGCTGGAGCAGTTGCTGAAGAAGTC...ATGAGAAGCCTTCCGAGACTTTGTAATTAAATGAACCAAAATCGGAAACAAACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000009058.10 |
||
| CDS-3UTR GCA 90 bp | TCACGTAATGCAATTAAAAACATGGCCCTGTTTAACTATGGCTTGTTTGTTTGTTGTTCTCTGCAATGCTaGAGTCAAAGAGAATGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: SRNAIKNMALFNYGLFVCCSLQC*SQREWA Trigger: AGCCCATTCTCTTTGACTGCAGCATTGCAGAGAACA...ACAAACAAACAAGCCATAGTTAAACAGGGCCATGTTTTTAATTGCATTACGTGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000009058.10 |
||
| CDS-3UTR CCA 90 bp | TGTTTGTTTCCGATTTTGGTTCATTTAATTACAAAGTCTCGGAAGGCTTCTCATAGGTTTGCTACATTCTaGGTAACTACAGCAAGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: CLFPILVHLITKSRKASHRFATF*VTTASL Trigger: CAGGCTTGCTGTAGTTACCCAGAATGTAGCAAACCT...ATGAGAAGCCTTCCGAGACTTTGTAATTAAATGAACCAAAATCGGAAACAAACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009058.10 |
||
| CDS-3UTR CCA 90 bp | CACGTAATGCAATTAAAAACATGGCCCTGTTTAACTATGGCTTGTTTGTTTGTTAAATACATCATGGCCTaGGTGAAGGAGAACGTGATC | + |
|
Preference number: 4 (lower is better) Translates to: HVMQLKTWPCLTMACLFVKYIMA*VKENVI Trigger: GATCACGTTCTCCTTCACCCAGGCCATGATGTATTT...AACAAACAAACAAGCCATAGTTAAACAGGGCCATGTTTTTAATTGCATTACGTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000009058.10 |
||
| CDS-3UTR TCA 90 bp | CACGTAATGCAATTAAAAACATGGCCCTGTTTAACTATGGCTTGTTTGTTTGTTTGCCCTTTTCTCTCATaGGCTCATCATGATTTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: HVMQLKTWPCLTMACLFVCPFLS*AHHDFL Trigger: AAGGAAATCATGATGAGCTCATGAGAGAAAAGGGCA...AACAAACAAACAAGCCATAGTTAAACAGGGCCATGTTTTTAATTGCATTACGTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000009058.10 |
||
| CDS-3UTR GCA 90 bp | CACGTAATGCAATTAAAAACATGGCCCTGTTTAACTATGGCTTGTTTGTTTGTTGCGGAAGTTTTCAATTaGTTCTGTAGCAATCTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: HVMQLKTWPCLTMACLFVAEVFN*FCSNLP Trigger: GGGAAGATTGCTACAGAAGCAATTGAAAACTTCCGC...AACAAACAAACAAGCCATAGTTAAACAGGGCCATGTTTTTAATTGCATTACGTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000009058.10 |
||
| CDS-3UTR CCA 90 bp | CACGTAATGCAATTAAAAACATGGCCCTGTTTAACTATGGCTTGTTTGTTTGTTAAAGGCTTCTATGTTTaGGGCCAAGTGTCCAATACT | + |
|
Preference number: 4 (lower is better) Translates to: HVMQLKTWPCLTMACLFVKGFYV*GQVSNT Trigger: AGTATTGGACACTTGGCCCCAAACATAGAAGCCTTT...AACAAACAAACAAGCCATAGTTAAACAGGGCCATGTTTTTAATTGCATTACGTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000009058.10 |
||
| 3UTR CAA 72 bp | TCTCTTGGTCTTGCTTTCTGTGGACACTTCTGTAAATaGATCTCCTTATTAAAGGTGATTTGGATTCTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: SLGLAFCGHFCK*ISLLKVIWILL Trigger: CAGAAGAATCCAAATCACCTTTAATAAGGAGATCAATTTACAGAAGTGTCCACAGAAAGCAAGACCAAGAGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199955.5 |
||
| CDS-3UTR CCA 90 bp | TCACGTAATGCAATTAAAAACATGGCCCTGTTTAACTATGGCTTGTTTGTTTGTTTGATTAGTAATGCTTaGCAGAATACTGGCTTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: SRNAIKNMALFNYGLFVCLISNA*QNTGFC Trigger: GCAGAAGCCAGTATTCTGCCAAGCATTACTAATCAA...ACAAACAAACAAGCCATAGTTAAACAGGGCCATGTTTTTAATTGCATTACGTGA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000009058.10 |
||
| CDS-3UTR CCA 90 bp | TCACGTAATGCAATTAAAAACATGGCCCTGTTTAACTATGGCTTGTTTGTTTGTCTTTGTCTCCTACTCTaGTGTTGTATTTATCAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: SRNAIKNMALFNYGLFVCLCLLL*CCIYQA Trigger: TGCCTGATAAATACAACACCAGAGTAGGAGACAAAG...ACAAACAAACAAGCCATAGTTAAACAGGGCCATGTTTTTAATTGCATTACGTGA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000009058.10 |
||
| 3UTR CAA 72 bp | TGGCTTGTTTGTTTGTTTGTTTGTTTGTTTCCGATTTaGGTTCATTTAATTACAAAGTCTCGGAAGGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: WLVCLFVCLFPI*VHLITKSRKAS Trigger: AGAAGCCTTCCGAGACTTTGTAATTAAATGAACCAAAATCGGAAACAAACAAACAAACAAACAAACAAGCCA 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009058.10 |
||
| CDS-3UTR GCA 90 bp | TGTTTGTTTCCGATTTTGGTTCATTTAATTACAAAGTCTCGGAAGGCTTCTCATCAGAATACTGGCTTCTaGTTTTGTAAAACTATCTGT | + |
|
Preference number: 4 (lower is better) Translates to: CLFPILVHLITKSRKASHQNTGF*FCKTIC Trigger: ACAGATAGTTTTACAAAAGCAGAAGCCAGTATTCTG...ATGAGAAGCCTTCCGAGACTTTGTAATTAAATGAACCAAAATCGGAAACAAACA 34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000009058.10 |
||
| CDS-3UTR CAA 90 bp | CAAAGTCTCGGAAGGCTTCTCATCTTGATGGAGTTACCTTTAACAGCCCTTGCCTCTGTGAGCCGGGTGTaGAGCTCCCCAACATCATGC | + |
|
Preference number: 5 (lower is better) Translates to: QSLGRLLILMELPLTALASVSRV*SSPTSC Trigger: GCATGATGTTGGGGAGCTCAACACCCGGCTCACAGA...GGCAAGGGCTGTTAAAGGTAACTCCATCAAGATGAGAAGCCTTCCGAGACTTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009058.10 |
||
| CDS TCA 90 bp | TTCCAGCTGCCAGGCACCAAAGTGAAACCTGGATGTAGGCAACTATaGGCACACCAGCACCAATCCCGGTGTAATAGTAGGCGTATATGG | + |
|
Preference number: 5 (lower is better) Translates to: FQLPGTKVKPGCRQL*AHQHQSRCNSRRIW Trigger: CCATATACGCCTACTATTACACCGGGATTGGTGCTGGTGTGCTCATAGTTGCCTACATCCAGGTTTCACTTTGGTGCCTGGCAGCTGGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009058.10 |
||
| CDS-3UTR CAA 90 bp | GAGCCGGGTGTTGAGCTCCCCAACATCATGCACATCAAACCAGCCTATCTCCTGATCTTCGAGAAGTTCTaGTCTGCTCTTCCCTTAAGG | + |
|
Preference number: 5 (lower is better) Translates to: EPGVELPNIMHIKPAYLLIFEKF*SALPLR Trigger: CCTTAAGGGAAGAGCAGACAAGAACTTCTCGAAGAT...CAGGAGATAGGCTGGTTTGATGTGCATGATGTTGGGGAGCTCAACACCCGGCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000196580.5 ENSMUST00000199955.5 |
||
| CDS TCA 90 bp | CTTTGTCTCCTACTCTGGTGTTGTATTTATCAGGCAGTGAGTCGATaGACTGGTGGATGTTGGCCTCCTTGGCTGCCCTCACAATCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: LCLLLWCCIYQAVSR*TGGCWPPWLPSQSP Trigger: AGGAGATTGTGAGGGCAGCCAAGGAGGCCAACATCCACCAGTTCATCGACTCACTGCCTGATAAATACAACACCAGAGTAGGAGACAAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009058.10 |
||
| CDS-3UTR CAA 90 bp | TCTGTGAGCCGGGTGTTGAGCTCCCCAACATCATGCACATCAAACCAGCCTATCATCTTCGAGAAGTTCTaGTCTGCTCTTCCCTTAAGG | + |
|
Preference number: 5 (lower is better) Translates to: SVSRVLSSPTSCTSNQPIIFEKF*SALPLR Trigger: CCTTAAGGGAAGAGCAGACAAGAACTTCTCGAAGAT...GATAGGCTGGTTTGATGTGCATGATGTTGGGGAGCTCAACACCCGGCTCACAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000196580.5 ENSMUST00000199955.5 |
||
| CDS-3UTR CAA 90 bp | TCTCATCTTGATGGAGTTACCTTTAACAGCCCTTGCCTTTTAACTTTGGTTTGGCGGCCTTCCCTGGCTTaGTCCAGCGCTTCCTGGACA | + |
|
Preference number: 5 (lower is better) Translates to: SHLDGVTFNSPCLLTLVWRPSLA*SSASWT Trigger: TGTCCAGGAAGCGCTGGACAAAGCCAGGGAAGGCCG...CCAAACCAAAGTTAAAAGGCAAGGGCTGTTAAAGGTAACTCCATCAAGATGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009058.10 |
||
| CDS-3UTR CAA 90 bp | GAGCCGGGTGTTGAGCTCCCCAACATCATGCACATCAAACCAGCCTATCTCCTGTCCTTTTTACTCTTTTaGCCCATCTTCGAGAAGTTC | + |
|
Preference number: 5 (lower is better) Translates to: EPGVELPNIMHIKPAYLLSFLLF*PIFEKF Trigger: GAACTTCTCGAAGATGGGCAAAAAGAGTAAAAAGGA...CAGGAGATAGGCTGGTTTGATGTGCATGATGTTGGGGAGCTCAACACCCGGCTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000196580.5 ENSMUST00000199955.5 |
||
| CDS CCA 90 bp | GTCATGTTTCCAAACACCAGCATCAAGAGGGGAAGTAATGTTCCATaGATAATAGCAGCGAGAGTTCCCAGAATCATGCACAGCTTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: VMFPNTSIKRGSNVP*IIAARVPRIMHSLS Trigger: GGACAAGCTGTGCATGATTCTGGGAACTCTCGCTGCTATTATCCATGGAACATTACTTCCCCTCTTGATGCTGGTGTTTGGAAACATGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000009058.10 ENSMUST00000196580.5 ENSMUST00000199955.5 |
||
| CDS-3UTR CAA 90 bp | CAAAGTCTCGGAAGGCTTCTCATCTTGATGGAGTTACCTTTAACAGCCCTTGCCATCTTCGAGAAGTTCTaGTCTGCTCTTCCCTTAAGG | + |
|
Preference number: 5 (lower is better) Translates to: QSLGRLLILMELPLTALAIFEKF*SALPLR Trigger: CCTTAAGGGAAGAGCAGACAAGAACTTCTCGAAGAT...GGCAAGGGCTGTTAAAGGTAACTCCATCAAGATGAGAAGCCTTCCGAGACTTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009058.10 |
||
| CDS-3UTR CAA 90 bp | CAAAGTCTCGGAAGGCTTCTCATCTTGATGGAGTTACCTTTAACAGCCCTTGCCTCTTCTCTCTTGGTCTaGCTTTCTGTGGACACTTCT | + |
|
Preference number: 5 (lower is better) Translates to: QSLGRLLILMELPLTALASSLLV*LSVDTS Trigger: AGAAGTGTCCACAGAAAGCAAGACCAAGAGAGAAGA...GGCAAGGGCTGTTAAAGGTAACTCCATCAAGATGAGAAGCCTTCCGAGACTTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009058.10 |
||
| CDS-3UTR CAA 90 bp | TCTCATCTTGATGGAGTTACCTTTAACAGCCCTTGCCTTTTAACTTTGGTTTGGTGGGTGCCGTGCTCCTaGACTTTGCCGTTCTCAATC | + |
|
Preference number: 5 (lower is better) Translates to: SHLDGVTFNSPCLLTLVWWVPCS*TLPFSI Trigger: GATTGAGAACGGCAAAGTCAAGGAGCACGGCACCCA...CCAAACCAAAGTTAAAAGGCAAGGGCTGTTAAAGGTAACTCCATCAAGATGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009058.10 |
||
| CDS-3UTR CAA 90 bp | CAAAGTCTCGGAAGGCTTCTCATCTTGATGGAGTTACCTTTAACAGCCCTTGCCTCCTTTTTACTCTTTTaGCCCATCTTCGAGAAGTTC | + |
|
Preference number: 5 (lower is better) Translates to: QSLGRLLILMELPLTALASFLLF*PIFEKF Trigger: GAACTTCTCGAAGATGGGCAAAAAGAGTAAAAAGGA...GGCAAGGGCTGTTAAAGGTAACTCCATCAAGATGAGAAGCCTTCCGAGACTTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000009058.10 |
||
| CDS-3UTR CAA 90 bp | CTTGATGGAGTTACCTTTAACAGCCCTTGCCTTTTAACTTTGGTTTGGTGCCATGTTTGTAGCCCTTTGTaGAGAAGCTGTCAATGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: LDGVTFNSPCLLTLVWCHVCSPL*RSCQCL Trigger: CAAGCATTGACAGCTTCTCAACAAAGGGCTACAAAC...ATGGCACCAAACCAAAGTTAAAAGGCAAGGGCTGTTAAAGGTAACTCCATCAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009058.10 |
||
| CDS-3UTR CAA 90 bp | TCACGTAATGCAATTAAAAACATGGCCCTGTTTAACTATGGCTTGTTTGTTTGTATGTATCGGACTCGCTaGGTGAGGATCTCTCCGGCT | + |
|
Preference number: 5 (lower is better) Translates to: SRNAIKNMALFNYGLFVCMYRTR*VRISPA Trigger: AGCCGGAGAGATCCTCACCAAGCGAGTCCGATACAT...ACAAACAAACAAGCCATAGTTAAACAGGGCCATGTTTTTAATTGCATTACGTGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000009058.10 |
||
| CDS-3UTR CAA 90 bp | TCACGTAATGCAATTAAAAACATGGCCCTGTTTAACTATGGCTTGTTTGTTTGTCCGTGCTCCTTGACTTaGCCGTTCTCAATCACCACG | + |
|
Preference number: 5 (lower is better) Translates to: SRNAIKNMALFNYGLFVCPCSLT*PFSITT Trigger: CGTGGTGATTGAGAACGGCAAAGTCAAGGAGCACGG...ACAAACAAACAAGCCATAGTTAAACAGGGCCATGTTTTTAATTGCATTACGTGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000009058.10 |
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| CDS-3UTR CAA 90 bp | TCTCATCTTGATGGAGTTACCTTTAACAGCCCTTGCCTTTTAACTTTGGTTTGGACTAAGTCTTCTCTCTaGGTCTTGCTTTCTGTGGAC | + |
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Preference number: 5 (lower is better) Translates to: SHLDGVTFNSPCLLTLVWTKSSL*VLLSVD Trigger: GTCCACAGAAAGCAAGACCAAGAGAGAAGACTTAGT...CCAAACCAAAGTTAAAAGGCAAGGGCTGTTAAAGGTAACTCCATCAAGATGAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009058.10 |
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| CDS-3UTR CAA 90 bp | TCTCATCTTGATGGAGTTACCTTTAACAGCCCTTGCCTTTTAACTTTGGTTTGGTCTCCTACTCTGGTGTaGTATTTATCAGGCAGTGAG | + |
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Preference number: 5 (lower is better) Translates to: SHLDGVTFNSPCLLTLVWSPTLV*YLSGSE Trigger: CTCACTGCCTGATAAATACAACACCAGAGTAGGAGA...CCAAACCAAAGTTAAAAGGCAAGGGCTGTTAAAGGTAACTCCATCAAGATGAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009058.10 |
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| CDS TCA 90 bp | TATGAGCACACCAGCACCAATCCCGGTGTAATAGTAGGCGTATTTTaGTTAGTAATGCTTGGCAGAATACTGGCTTCTGCTTTTGTAAAA | + |
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Preference number: 5 (lower is better) Translates to: YEHTSTNPGVIVGVF*LVMLGRILASAFVK Trigger: TTTTACAAAAGCAGAAGCCAGTATTCTGCCAAGCATTACTAATCAAAATACGCCTACTATTACACCGGGATTGGTGCTGGTGTGCTCATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000196580.5 ENSMUST00000199955.5 |
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| CDS-3UTR CAA 90 bp | CACGTAATGCAATTAAAAACATGGCCCTGTTTAACTATGGCTTGTTTGTTTGTTCAACTGCTCCAGCTTTaGCATAAGCCTGGAGTTCCT | + |
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Preference number: 5 (lower is better) Translates to: HVMQLKTWPCLTMACLFVQLLQL*HKPGVP Trigger: AGGAACTCCAGGCTTATGCAAAAGCTGGAGCAGTTG...AACAAACAAACAAGCCATAGTTAAACAGGGCCATGTTTTTAATTGCATTACGTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000009058.10 |
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| CDS-3UTR CAA 90 bp | TGTTTGTTTCCGATTTTGGTTCATTTAATTACAAAGTCTCGGAAGGCTTCTCATCAAAGGCTTCTATGTTaGGGGCCAAGTGTCCAATAC | + |
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Preference number: 5 (lower is better) Translates to: CLFPILVHLITKSRKASHQRLLC*GPSVQY Trigger: GTATTGGACACTTGGCCCCAAACATAGAAGCCTTTG...ATGAGAAGCCTTCCGAGACTTTGTAATTAAATGAACCAAAATCGGAAACAAACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000009058.10 |
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| CDS-3UTR CAA 90 bp | TGTTTGTTTCCGATTTTGGTTCATTTAATTACAAAGTCTCGGAAGGCTTCTCATCTCATCATGATTTCCTaGCTCCACAATGACACCACC | + |
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Preference number: 5 (lower is better) Translates to: CLFPILVHLITKSRKASHLIMIS*LHNDTT Trigger: GGTGGTGTCATTGTGGAGCAAGGAAATCATGATGAG...ATGAGAAGCCTTCCGAGACTTTGTAATTAAATGAACCAAAATCGGAAACAAACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009058.10 |
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| CDS-3UTR CAA 90 bp | TCACGTAATGCAATTAAAAACATGGCCCTGTTTAACTATGGCTTGTTTGTTTGTAAAAGTCATGAGTTGTaGTGCCACCAAGTAGGCACC | + |
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Preference number: 5 (lower is better) Translates to: SRNAIKNMALFNYGLFVCKSHEL*CHQVGT Trigger: GGTGCCTACTTGGTGGCACAACAACTCATGACTTTT...ACAAACAAACAAGCCATAGTTAAACAGGGCCATGTTTTTAATTGCATTACGTGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000009058.10 |
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| CDS-3UTR CAA 90 bp | TCTCATCTTGATGGAGTTACCTTTAACAGCCCTTGCCTTTTAACTTTGGTTTGGGGACACTTCTGTAAATaGATCTCCTTATTAAAGGTG | + |
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Preference number: 5 (lower is better) Translates to: SHLDGVTFNSPCLLTLVWGHFCK*ISLLKV Trigger: CACCTTTAATAAGGAGATCAATTTACAGAAGTGTCC...CCAAACCAAAGTTAAAAGGCAAGGGCTGTTAAAGGTAACTCCATCAAGATGAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000009058.10 |
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| CDS-3UTR CAA 90 bp | TCTCATCTTGATGGAGTTACCTTTAACAGCCCTTGCCTTTTAACTTTGGTTTGGAAACCCCTACAATCCTaGAAAATACTATGGCAAACA | + |
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Preference number: 5 (lower is better) Translates to: SHLDGVTFNSPCLLTLVWKPLQS*KILWQT Trigger: TGTTTGCCATAGTATTTTCAAGGATTGTAGGGGTTT...CCAAACCAAAGTTAAAAGGCAAGGGCTGTTAAAGGTAACTCCATCAAGATGAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000009058.10 |
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| CDS-3UTR CAA 90 bp | TGTTTGTTTCCGATTTTGGTTCATTTAATTACAAAGTCTCGGAAGGCTTCTCATTTCAAAAGTCATGAGTaGTTGTGCCACCAAGTAGGC | + |
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Preference number: 5 (lower is better) Translates to: CLFPILVHLITKSRKASHFKSHE*LCHQVG Trigger: GCCTACTTGGTGGCACAACAACTCATGACTTTTGAA...ATGAGAAGCCTTCCGAGACTTTGTAATTAAATGAACCAAAATCGGAAACAAACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000009058.10 |
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| CDS-3UTR CAA 90 bp | CACGTAATGCAATTAAAAACATGGCCCTGTTTAACTATGGCTTGTTTGTTTGTTAACTTCTGCCTAATCTaGTGTATCTGTCTTCCAGCT | + |
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Preference number: 5 (lower is better) Translates to: HVMQLKTWPCLTMACLFVNFCLI*CICLPA Trigger: AGCTGGAAGACAGATACACAAGATTAGGCAGAAGTT...AACAAACAAACAAGCCATAGTTAAACAGGGCCATGTTTTTAATTGCATTACGTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000009058.10 |
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| CDS-3UTR CAA 90 bp | CACGTAATGCAATTAAAAACATGGCCCTGTTTAACTATGGCTTGTTTGTTTGTTCCACTGGACATTCAGTaGCTTTATTTCTTTGCCATC | + |
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Preference number: 5 (lower is better) Translates to: HVMQLKTWPCLTMACLFVPLDIQ*LYFFAI Trigger: GATGGCAAAGAAATAAAGCAACTGAATGTCCAGTGG...AACAAACAAACAAGCCATAGTTAAACAGGGCCATGTTTTTAATTGCATTACGTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000009058.10 |
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| CDS TCA 72 bp | CCAGCGCTTCCTGGACAACATCAGGCAGTGAGTCGATaGACTGGTGGATGTTGGCCTCCTTGGCTGCCCTCA | + |
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Preference number: 6 (lower is better) Translates to: PALPGQHQAVSR*TGGCWPPWLPS Trigger: TGAGGGCAGCCAAGGAGGCCAACATCCACCAGTTCATCGACTCACTGCCTGATGTTGTCCAGGAAGCGCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198650.2 |
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| CDS CCA 72 bp | TCCTGGACAACATCAGGCAGTGAGTCGATGAACTGGTaGATGTTGGCCTCCTTGGCTGCCCTCACAATCTCC | + |
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Preference number: 6 (lower is better) Translates to: SWTTSGSESMNW*MLASLAALTIS Trigger: GGAGATTGTGAGGGCAGCCAAGGAGGCCAACATCCACCAGTTCATCGACTCACTGCCTGATGTTGTCCAGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198650.2 |
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| CDS CCA 72 bp | GCTTCCTGGACAACATCAGGCAGTGAGTCGATGAACTaGTGGATGTTGGCCTCCTTGGCTGCCCTCACAATC | + |
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Preference number: 6 (lower is better) Translates to: ASWTTSGSESMN*WMLASLAALTI Trigger: GATTGTGAGGGCAGCCAAGGAGGCCAACATCCACCAGTTCATCGACTCACTGCCTGATGTTGTCCAGGAAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198650.2 |
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| CDS TCA 72 bp | CCAGGCACCAAAGTGAAACCTGGATGTAGGCAACTATaGGCACACCAGCACCAATCCCGGTGTAATAGTAGG | + |
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Preference number: 6 (lower is better) Translates to: PGTKVKPGCRQL*AHQHQSRCNSR Trigger: CCTACTATTACACCGGGATTGGTGCTGGTGTGCTCATAGTTGCCTACATCCAGGTTTCACTTTGGTGCCTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009058.10 |
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| CDS TCA 72 bp | CTACTCTGGTGTTGTATTTATCAGGCAGTGAGTCGATaGACTGGTGGATGTTGGCCTCCTTGGCTGCCCTCA | + |
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Preference number: 6 (lower is better) Translates to: LLWCCIYQAVSR*TGGCWPPWLPS Trigger: TGAGGGCAGCCAAGGAGGCCAACATCCACCAGTTCATCGACTCACTGCCTGATAAATACAACACCAGAGTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009058.10 |
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| CDS CCA 72 bp | GTGTTGTATTTATCAGGCAGTGAGTCGATGAACTGGTaGATGTTGGCCTCCTTGGCTGCCCTCACAATCTCC | + |
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Preference number: 6 (lower is better) Translates to: VLYLSGSESMNW*MLASLAALTIS Trigger: GGAGATTGTGAGGGCAGCCAAGGAGGCCAACATCCACCAGTTCATCGACTCACTGCCTGATAAATACAACAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009058.10 |
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| CDS CCA 72 bp | CTGGTGTTGTATTTATCAGGCAGTGAGTCGATGAACTaGTGGATGTTGGCCTCCTTGGCTGCCCTCACAATC | + |
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Preference number: 6 (lower is better) Translates to: LVLYLSGSESMN*WMLASLAALTI Trigger: GATTGTGAGGGCAGCCAAGGAGGCCAACATCCACCAGTTCATCGACTCACTGCCTGATAAATACAACACCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009058.10 |
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| CDS GCA 72 bp | AGTTCCCAGAATCATGCACAGCTTGTCCAGCCAATCTaGATAGCGAAACATCCCAAATACGCCAACAGCAGG | + |
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Preference number: 6 (lower is better) Translates to: SSQNHAQLVQPI*IAKHPKYANSR Trigger: CCTGCTGTTGGCGTATTTGGGATGTTTCGCTATGCAGATTGGCTGGACAAGCTGTGCATGATTCTGGGAACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000009058.10 ENSMUST00000196580.5 ENSMUST00000199955.5 |
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| CDS TCA 72 bp | TTTGTCTCCTACTCTGGTGTTGTATTTATCAGGCAGTaGGTCGATGAACTGGTGGATGTTGGCCTCCTTGGC | + |
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Preference number: 6 (lower is better) Translates to: FVSYSGVVFIRQ*VDELVDVGLLG Trigger: GCCAAGGAGGCCAACATCCACCAGTTCATCGACTCACTGCCTGATAAATACAACACCAGAGTAGGAGACAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009058.10 |
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| CDS CCA 72 bp | CCAAACACCAGCATCAAGAGGGGAAGTAATGTTCCATaGATAATAGCAGCGAGAGTTCCCAGAATCATGCAC | + |
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Preference number: 6 (lower is better) Translates to: PNTSIKRGSNVP*IIAARVPRIMH Trigger: GTGCATGATTCTGGGAACTCTCGCTGCTATTATCCATGGAACATTACTTCCCCTCTTGATGCTGGTGTTTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000009058.10 ENSMUST00000196580.5 ENSMUST00000199955.5 |
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| CDS CCA 72 bp | CAGAGTACTGTTGGGTCCACTTTGATTAGTAATGCTTaGCAGAATACTGGCTTCTGCTTTTGTAAAACTATC | + |
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Preference number: 6 (lower is better) Translates to: QSTVGSTLISNA*QNTGFCFCKTI Trigger: GATAGTTTTACAAAAGCAGAAGCCAGTATTCTGCCAAGCATTACTAATCAAAGTGGACCCAACAGTACTCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000009058.10 |
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| CDS GCA 72 bp | ACTTTGATTAGTAATGCTTGGCAGAATACTGGCTTCTaGTTTTGTAAAACTATCTGTCATGTTTCCAAACAC | + |
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Preference number: 6 (lower is better) Translates to: TLISNAWQNTGF*FCKTICHVSKH Trigger: GTGTTTGGAAACATGACAGATAGTTTTACAAAAGCAGAAGCCAGTATTCTGCCAAGCATTACTAATCAAAGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000009058.10 |
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