Pregenerated sensors for ABCB10 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031974Ensembl transcript IDs: ENSMUST00000075578.7
Found 90 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CGAGTTCTGAGGACACCCTGCAAGGAGCTGAGCAGATGTGGACAGTaGAAGGTGACCGTCACAGGTGTGCTGCCTACTCACCCCAAGACC | + |
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Preference number: 1 (lower is better) Translates to: RVLRTPCKELSRCGQ*KVTVTGVLPTHPKT Trigger: GGTCTTGGGGTGAGTAGGCAGCACACCTGTGACGGTCACCTTCCACTGTCCACATCTGCTCAGCTCCTTGCAGGGTGTCCTCAGAACTCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075578.7 |
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| 3UTR TCA 90 bp | CTCTGGTGCTTGGAAGGGCAGCCACACTTGCCACACGGTGACTCCTaGAGGTTTCTAGGACTTAGAGTCTCAGCAGCAGGACCACATGTG | + |
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Preference number: 1 (lower is better) Translates to: LWCLEGQPHLPHGDS*RFLGLRVSAAGPHV Trigger: CACATGTGGTCCTGCTGCTGAGACTCTAAGTCCTAGAAACCTTCAGGAGTCACCGTGTGGCAAGTGTGGCTGCCCTTCCAAGCACCAGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075578.7 |
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| 3UTR CCA 90 bp | CAACAGATGCGCCATGGATTTTCATCCACCTCTGTTGATAACGCCTaGTTATCTGTACCTTGCTTCTCAAAAAGAGTCATTAAACAAGGA | + |
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Preference number: 1 (lower is better) Translates to: QQMRHGFSSTSVDNA*LSVPCFSKRVIKQG Trigger: TCCTTGTTTAATGACTCTTTTTGAGAAGCAAGGTACAGATAACCAGGCGTTATCAACAGAGGTGGATGAAAATCCATGGCGCATCTGTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000075578.7 |
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| 3UTR CAA 90 bp | CCCAGGCTTCACACGGCCTCCAGGCCCTGTTCTCTGCAATGCTGTTaGGTTTTAAGGTCTCTCAGCCCACGGGTAGCTGCTGCTCTGTTT | + |
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Preference number: 2 (lower is better) Translates to: PRLHTASRPCSLQCC*VLRSLSPRVAAALF Trigger: AAACAGAGCAGCAGCTACCCGTGGGCTGAGAGACCTTAAAACCAAACAGCATTGCAGAGAACAGGGCCTGGAGGCCGTGTGAAGCCTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075578.7 |
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| 3UTR-3UTR GCA 90 bp | CTCCTAGCCTTGGTTCTGCAGTTAGATGTTCTCTGGTGCTTGGAAGGGCAGCCATGTATCAGACTCTGGTaGTCAGATGGTGAGCACTGC | + |
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Preference number: 2 (lower is better) Translates to: LLALVLQLDVLWCLEGQPCIRLW*SDGEHC Trigger: GCAGTGCTCACCATCTGAGCACCAGAGTCTGATACA...TGGCTGCCCTTCCAAGCACCAGAGAACATCTAACTGCAGAACCAAGGCTAGGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075578.7 |
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| 3UTR-3UTR GCA 90 bp | GGAGCAGGGCTTCCAAACTCTTCCAATCTCTGTTTGAAACAAAGTCTCAAGCGCAAGGGCAGCCACACTTaGCACACGGTGACTCCTGAA | + |
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Preference number: 2 (lower is better) Translates to: GAGLPNSSNLCLKQSLKRKGSHT*HTVTPE Trigger: TTCAGGAGTCACCGTGTGGCAAGTGTGGCTGCCCTT...GCGCTTGAGACTTTGTTTCAAACAGAGATTGGAAGAGTTTGGAAGCCCTGCTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075578.7 |
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| 3UTR-3UTR CCA 90 bp | CAACAACTCCGAGTTCTGAGGACACCCTGCAAGGAGCTGAGCAGATGTGGACAGCTCTGTTTCTGTCTGTaGACAGGGTATATGATAGAG | + |
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Preference number: 2 (lower is better) Translates to: QQLRVLRTPCKELSRCGQLCFCL*TGYMIE Trigger: CTCTATCATATACCCTGTCCACAGACAGAAACAGAG...CTGTCCACATCTGCTCAGCTCCTTGCAGGGTGTCCTCAGAACTCGGAGTTGTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075578.7 |
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| 3UTR CAA 90 bp | CATGCACTCCATGGAGCAGGGCTTCCAAACTCTTCCAATCTCTGTTaGAAACAAAGTCTCAAGCGCTGGCTGGTTTTAAAGCTCAGGTGG | + |
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Preference number: 2 (lower is better) Translates to: HALHGAGLPNSSNLC*KQSLKRWLVLKLRW Trigger: CCACCTGAGCTTTAAAACCAGCCAGCGCTTGAGACTTTGTTTCAAACAGAGATTGGAAGAGTTTGGAAGCCCTGCTCCATGGAGTGCATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075578.7 |
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| 3UTR-3UTR TCA 90 bp | CAACAACTCCGAGTTCTGAGGACACCCTGCAAGGAGCTGAGCAGATGTGGACAGAGGTACATCGTAAAATaGCATTGTGCACTCTTTGTG | + |
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Preference number: 2 (lower is better) Translates to: QQLRVLRTPCKELSRCGQRYIVK*HCALFV Trigger: CACAAAGAGTGCACAATGTCATTTTACGATGTACCT...CTGTCCACATCTGCTCAGCTCCTTGCAGGGTGTCCTCAGAACTCGGAGTTGTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075578.7 |
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| 3UTR-3UTR TCA 90 bp | GGAGCAGGGCTTCCAAACTCTTCCAATCTCTGTTTGAAACAAAGTCTCAAGCGCCCACACGGTGACTCCTaGAGGTTTCTAGGACTTAGA | + |
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Preference number: 2 (lower is better) Translates to: GAGLPNSSNLCLKQSLKRPHGDS*RFLGLR Trigger: TCTAAGTCCTAGAAACCTTCAGGAGTCACCGTGTGG...GCGCTTGAGACTTTGTTTCAAACAGAGATTGGAAGAGTTTGGAAGCCCTGCTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075578.7 |
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| 3UTR-3UTR CCA 90 bp | GGAGCAGGGCTTCCAAACTCTTCCAATCTCTGTTTGAAACAAAGTCTCAAGCGCCAGTTAGATGTTCTCTaGTGCTTGGAAGGGCAGCCA | + |
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Preference number: 2 (lower is better) Translates to: GAGLPNSSNLCLKQSLKRQLDVL*CLEGQP Trigger: TGGCTGCCCTTCCAAGCACCAGAGAACATCTAACTG...GCGCTTGAGACTTTGTTTCAAACAGAGATTGGAAGAGTTTGGAAGCCCTGCTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075578.7 |
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| 3UTR-3UTR TCA 90 bp | AAAAATAGAAGCTTTCCAGTTTACAGAACGGGACTTCTTCCTTTGGCAAAATGTCTGGTGCTCAGATGGTaGGCACTGCACATTTGGACA | + |
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Preference number: 2 (lower is better) Translates to: KNRSFPVYRTGLLPLAKCLVLRW*ALHIWT Trigger: TGTCCAAATGTGCAGTGCTCACCATCTGAGCACCAG...ACATTTTGCCAAAGGAAGAAGTCCCGTTCTGTAAACTGGAAAGCTTCTATTTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000075578.7 |
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| 3UTR CAA 90 bp | AATACATGCTTCAACAGATGCGCCATGGATTTTCATCCACCTCTGTaGATAACGCCTGGTTATCTGTACCTTGCTTCTCAAAAAGAGTCA | + |
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Preference number: 2 (lower is better) Translates to: NTCFNRCAMDFHPPL*ITPGYLYLASQKES Trigger: TGACTCTTTTTGAGAAGCAAGGTACAGATAACCAGGCGTTATCAACAGAGGTGGATGAAAATCCATGGCGCATCTGTTGAAGCATGTATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000075578.7 |
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| 3UTR-3UTR CCA 90 bp | GGAGCAGGGCTTCCAAACTCTTCCAATCTCTGTTTGAAACAAAGTCTCAAGCGCATTGTGCACTCTTTGTaGAAAGAGGCATATTTCAAA | + |
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Preference number: 2 (lower is better) Translates to: GAGLPNSSNLCLKQSLKRIVHSL*KEAYFK Trigger: TTTGAAATATGCCTCTTTCCACAAAGAGTGCACAAT...GCGCTTGAGACTTTGTTTCAAACAGAGATTGGAAGAGTTTGGAAGCCCTGCTCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075578.7 |
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| 3UTR-3UTR GCA 90 bp | ATTTTACAACTGAAGAAAGGTCTGGGAGGACAGGTACATCGTAAAATGACATTGCCCTGTTCTCTGCAATaGTGTTTGGTTTTAAGGTCT | + |
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Preference number: 2 (lower is better) Translates to: ILQLKKGLGGQVHRKMTLPCSLQ*CLVLRS Trigger: AGACCTTAAAACCAAACAGCATTGCAGAGAACAGGG...CAATGTCATTTTACGATGTACCTGTCCTCCCAGACCTTTCTTCAGTTGTAAAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000075578.7 |
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| 3UTR-3UTR GCA 90 bp | TCTGCAAGAGTCATCATACTCAAGGCTGAAAATTATATTATTCAGATTCAGCCTTCAGATGGTGAGCACTaGACATTTGGACAGGTACAG | + |
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Preference number: 2 (lower is better) Translates to: SARVIILKAENYIIQIQPSDGEH*TFGQVQ Trigger: CTGTACCTGTCCAAATGTGCAGTGCTCACCATCTGA...AGGCTGAATCTGAATAATATAATTTTCAGCCTTGAGTATGATGACTCTTGCAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075578.7 |
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| 3UTR-3UTR GCA 90 bp | AAAATAGAAGCTTTCCAGTTTACAGAACGGGACTTCTTCCTTTGGCAAAATGTACGTAAAATGACATTGTaGACTCTTTGTGGAAAGAGG | + |
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Preference number: 2 (lower is better) Translates to: KIEAFQFTERDFFLWQNVRKMTL*TLCGKR Trigger: CCTCTTTCCACAAAGAGTGCACAATGTCATTTTACG...TACATTTTGCCAAAGGAAGAAGTCCCGTTCTGTAAACTGGAAAGCTTCTATTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000075578.7 |
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| 3UTR CCA 72 bp | AGGACACCCTGCAAGGAGCTGAGCAGATGTGGACAGTaGAAGGTGACCGTCACAGGTGTGCTGCCTACTCAC | + |
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Preference number: 3 (lower is better) Translates to: RTPCKELSRCGQ*KVTVTGVLPTH Trigger: GTGAGTAGGCAGCACACCTGTGACGGTCACCTTCCACTGTCCACATCTGCTCAGCTCCTTGCAGGGTGTCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075578.7 |
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| 3UTR GCA 72 bp | CTCCTAGCCTTGGTTCTGCAGTTAGATGTTCTCTGGTaGTTGGAAGGGCAGCCACACTTGCCACACGGTGAC | + |
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Preference number: 3 (lower is better) Translates to: LLALVLQLDVLW*LEGQPHLPHGD Trigger: GTCACCGTGTGGCAAGTGTGGCTGCCCTTCCAAGCACCAGAGAACATCTAACTGCAGAACCAAGGCTAGGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075578.7 |
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| 3UTR-3UTR CAA 90 bp | ACAACTCCGAGTTCTGAGGACACCCTGCAAGGAGCTGAGCAGATGTGGACAGTGGTGAGCACTGCACATTaGGACAGGTACAGCCCTGTA | + |
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Preference number: 3 (lower is better) Translates to: TTPSSEDTLQGAEQMWTVVSTAH*DRYSPV Trigger: TACAGGGCTGTACCTGTCCAAATGTGCAGTGCTCAC...CACTGTCCACATCTGCTCAGCTCCTTGCAGGGTGTCCTCAGAACTCGGAGTTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075578.7 |
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| 3UTR-3UTR CAA 90 bp | ACAACTCCGAGTTCTGAGGACACCCTGCAAGGAGCTGAGCAGATGTGGACAGTGAGTGAGGTGTTCTGCTaGGCTAGCAAACACTGGAAC | + |
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Preference number: 3 (lower is better) Translates to: TTPSSEDTLQGAEQMWTVSEVFC*ASKHWN Trigger: GTTCCAGTGTTTGCTAGCCAAGCAGAACACCTCACT...CACTGTCCACATCTGCTCAGCTCCTTGCAGGGTGTCCTCAGAACTCGGAGTTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075578.7 |
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| 3UTR GCA 72 bp | TCGACTCTGACAGCACACACAGGAAGTGAGGTGTTCTaGTTGGCTAGCAAACACTGGAACCCTGCAGTCACT | + |
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Preference number: 3 (lower is better) Translates to: STLTAHTGSEVF*LASKHWNPAVT Trigger: AGTGACTGCAGGGTTCCAGTGTTTGCTAGCCAAGCAGAACACCTCACTTCCTGTGTGTGCTGTCAGAGTCGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075578.7 |
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| 3UTR GCA 72 bp | TTTGTGGAAAGAGGCATATTTCAAATAACTGAAGTATaGTCCCAGGCTTCACACGGCCTCCAGGCCCTGTTC | + |
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Preference number: 3 (lower is better) Translates to: FVERGIFQITEV*SQASHGLQALF Trigger: GAACAGGGCCTGGAGGCCGTGTGAAGCCTGGGAGCATACTTCAGTTATTTGAAATATGCCTCTTTCCACAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075578.7 |
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| 3UTR GCA 72 bp | GGACTTCTTCCTTTGGCAAAATGTATCAGACTCTGGTaGTCAGATGGTGAGCACTGCACATTTGGACAGGTA | + |
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Preference number: 3 (lower is better) Translates to: GLLPLAKCIRLW*SDGEHCTFGQV Trigger: TACCTGTCCAAATGTGCAGTGCTCACCATCTGAGCACCAGAGTCTGATACATTTTGCCAAAGGAAGAAGTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075578.7 |
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| 3UTR-3UTR CAA 90 bp | GGAGCAGGGCTTCCAAACTCTTCCAATCTCTGTTTGAAACAAAGTCTCAAGCGCGACATTGTGCACTCTTaGTGGAAAGAGGCATATTTC | + |
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Preference number: 3 (lower is better) Translates to: GAGLPNSSNLCLKQSLKRDIVHS*WKEAYF Trigger: GAAATATGCCTCTTTCCACAAAGAGTGCACAATGTC...GCGCTTGAGACTTTGTTTCAAACAGAGATTGGAAGAGTTTGGAAGCCCTGCTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075578.7 |
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| 3UTR-3UTR CAA 90 bp | GACACTGCTTCTCATCAAGAGGCACGGCAGGTGTGTCCATTTAACTACCTCTCACTGGTTATCTGTACCTaGCTTCTCAAAAAGAGTCAT | + |
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Preference number: 3 (lower is better) Translates to: DTASHQEARQVCPFNYLSLVICT*LLKKSH Trigger: ATGACTCTTTTTGAGAAGCAAGGTACAGATAACCAG...TGAGAGGTAGTTAAATGGACACACCTGCCGTGCCTCTTGATGAGAAGCAGTGTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000075578.7 |
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| 3UTR CCA 72 bp | GAAGCTTTCCAGTTTACAGAACGGGACTTCTTCCTTTaGCAAAATGTATCAGACTCTGGTGCTCAGATGGTG | + |
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Preference number: 3 (lower is better) Translates to: EAFQFTERDFFL*QNVSDSGAQMV Trigger: CACCATCTGAGCACCAGAGTCTGATACATTTTGCCAAAGGAAGAAGTCCCGTTCTGTAAACTGGAAAGCTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075578.7 |
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| 3UTR CCA 72 bp | CGCCATGGATTTTCATCCACCTCTGTTGATAACGCCTaGTTATCTGTACCTTGCTTCTCAAAAAGAGTCATT | + |
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Preference number: 3 (lower is better) Translates to: RHGFSSTSVDNA*LSVPCFSKRVI Trigger: AATGACTCTTTTTGAGAAGCAAGGTACAGATAACCAGGCGTTATCAACAGAGGTGGATGAAAATCCATGGCG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000075578.7 |
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| 3UTR GCA 72 bp | GGTCTGGGAGGACAGGTACATCGTAAAATGACATTGTaGACTCTTTGTGGAAAGAGGCATATTTCAAATAAC | + |
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Preference number: 3 (lower is better) Translates to: GLGGQVHRKMTL*TLCGKRHISNN Trigger: GTTATTTGAAATATGCCTCTTTCCACAAAGAGTGCACAATGTCATTTTACGATGTACCTGTCCTCCCAGACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075578.7 |
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| 3UTR GCA 72 bp | TCCACCTCTGTTGATAACGCCTGGTTATCTGTACCTTaGTTCTCAAAAAGAGTCATTAAACAAGGAGGTAAT | + |
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Preference number: 3 (lower is better) Translates to: STSVDNAWLSVP*FSKRVIKQGGN Trigger: ATTACCTCCTTGTTTAATGACTCTTTTTGAGAAGCAAGGTACAGATAACCAGGCGTTATCAACAGAGGTGGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000075578.7 |
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| 3UTR-3UTR CAA 90 bp | TCTGCAAGAGTCATCATACTCAAGGCTGAAAATTATATTATTCAGATTCAGCCTACGGGACTTCTTCCTTaGGCAAAATGTATCAGACTC | + |
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Preference number: 3 (lower is better) Translates to: SARVIILKAENYIIQIQPTGLLP*AKCIRL Trigger: GAGTCTGATACATTTTGCCAAAGGAAGAAGTCCCGT...AGGCTGAATCTGAATAATATAATTTTCAGCCTTGAGTATGATGACTCTTGCAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075578.7 |
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| 3UTR TCA 72 bp | ATGCCTTGCCTCTGCAAGAGTCATCATACTCAAGGCTaGAAATTATATTATTCAGATTCAGCCTTATTAATA | + |
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Preference number: 3 (lower is better) Translates to: MPCLCKSHHTQG*KLYYSDSALLI Trigger: TATTAATAAGGCTGAATCTGAATAATATAATTTTCAGCCTTGAGTATGATGACTCTTGCAGAGGCAAGGCAT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075578.7 |
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| CDS-3UTR GCA 90 bp | CAGTTAGATGTTCTCTGGTGCTTGGAAGGGCAGCCACACTTGCCACACGGTGACTGCGGCGCGGGGTCCTaGCAGCACCCAGCACCTGCG | + |
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Preference number: 4 (lower is better) Translates to: QLDVLWCLEGQPHLPHGDCGAGS*QHPAPA Trigger: CGCAGGTGCTGGGTGCTGGCAGGACCCCGCGCCGCA...GTCACCGTGTGGCAAGTGTGGCTGCCCTTCCAAGCACCAGAGAACATCTAACTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075578.7 |
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| CDS-3UTR CCA 90 bp | CTCCAGGCCCTGTTCTCTGCAATGCTGTTTGGTTTTAAGGTCTCTCAGCCCACGGTGGCAGCTGCACCCTaGAGCCTGGCGAACAGGGGA | + |
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Preference number: 4 (lower is better) Translates to: LQALFSAMLFGFKVSQPTVAAAP*SLANRG Trigger: TCCCCTGTTCGCCAGGCTCCAGGGTGCAGCTGCCAC...CGTGGGCTGAGAGACCTTAAAACCAAACAGCATTGCAGAGAACAGGGCCTGGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075578.7 |
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| CDS-3UTR CCA 90 bp | CTCCAGGCCCTGTTCTCTGCAATGCTGTTTGGTTTTAAGGTCTCTCAGCCCACGGCCCTCTCCACCTGCTaGGCTGTGACCGAGGAGAGG | + |
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Preference number: 4 (lower is better) Translates to: LQALFSAMLFGFKVSQPTALSTC*AVTEER Trigger: CCTCTCCTCGGTCACAGCCCAGCAGGTGGAGAGGGC...CGTGGGCTGAGAGACCTTAAAACCAAACAGCATTGCAGAGAACAGGGCCTGGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075578.7 |
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| CDS-3UTR TCA 90 bp | CAGTTAGATGTTCTCTGGTGCTTGGAAGGGCAGCCACACTTGCCACACGGTGACGGCCAACCAGCGCTGTaGCAGATCCAGATGGGATGG | + |
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Preference number: 4 (lower is better) Translates to: QLDVLWCLEGQPHLPHGDGQPAL*QIQMGW Trigger: CCATCCCATCTGGATCTGTCACAGCGCTGGTTGGCC...GTCACCGTGTGGCAAGTGTGGCTGCCCTTCCAAGCACCAGAGAACATCTAACTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075578.7 |
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| CDS-3UTR TCA 90 bp | CAGTTAGATGTTCTCTGGTGCTTGGAAGGGCAGCCACACTTGCCACACGGTGACCTGCTTCTGCCCACCTaGCAGGAGGATGCCCTTCTC | + |
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Preference number: 4 (lower is better) Translates to: QLDVLWCLEGQPHLPHGDLLLPT*QEDALL Trigger: GAGAAGGGCATCCTCCTGTCAGGTGGGCAGAAGCAG...GTCACCGTGTGGCAAGTGTGGCTGCCCTTCCAAGCACCAGAGAACATCTAACTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075578.7 |
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| CDS-3UTR TCA 90 bp | ACAACTCCGAGTTCTGAGGACACCCTGCAAGGAGCTGAGCAGATGTGGACAGTGACAGGCGGTGGGCTATaGTCAGCACGGTTCTCCCTT | + |
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Preference number: 4 (lower is better) Translates to: TTPSSEDTLQGAEQMWTVTGGGL*SARFSL Trigger: AAGGGAGAACCGTGCTGATCATAGCCCACCGCCTGT...CACTGTCCACATCTGCTCAGCTCCTTGCAGGGTGTCCTCAGAACTCGGAGTTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075578.7 |
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| 3UTR CAA 72 bp | CACACGGCCTCCAGGCCCTGTTCTCTGCAATGCTGTTaGGTTTTAAGGTCTCTCAGCCCACGGGTAGCTGCT | + |
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Preference number: 4 (lower is better) Translates to: HTASRPCSLQCC*VLRSLSPRVAA Trigger: AGCAGCTACCCGTGGGCTGAGAGACCTTAAAACCAAACAGCATTGCAGAGAACAGGGCCTGGAGGCCGTGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075578.7 |
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| CDS-3UTR GCA 90 bp | CTCCAGGCCCTGTTCTCTGCAATGCTGTTTGGTTTTAAGGTCTCTCAGCCCACGCAAGGCCTCCTTCTGTaGCAGCTGCAGCAACTGGTC | + |
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Preference number: 4 (lower is better) Translates to: LQALFSAMLFGFKVSQPTQGLLL*QLQQLV Trigger: GACCAGTTGCTGCAGCTGGCACAGAAGGAGGCCTTG...CGTGGGCTGAGAGACCTTAAAACCAAACAGCATTGCAGAGAACAGGGCCTGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075578.7 |
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| CDS-3UTR CCA 90 bp | TTTCCAAAGGCTGATGTTCCTTCTGATGCCTTGCCTCTGCAAGAGTCATCATACGGTCTCGCACACCGGTaGCAGCTGCACCCTGGAGCC | + |
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Preference number: 4 (lower is better) Translates to: FPKADVPSDALPLQESSYGLAHR*QLHPGA Trigger: GGCTCCAGGGTGCAGCTGCCACCGGTGTGCGAGACC...GTATGATGACTCTTGCAGAGGCAAGGCATCAGAAGGAACATCAGCCTTTGGAAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075578.7 |
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| CDS-3UTR CCA 90 bp | TCAGACTCTGGTGCTCAGATGGTGAGCACTGCACATTTGGACAGGTACAGCCCTCCTCGGCTAGCTGTGTaGCTTCTGCCAAGGAGTCCT | + |
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Preference number: 4 (lower is better) Translates to: SDSGAQMVSTAHLDRYSPPRLAV*LLPRSP Trigger: AGGACTCCTTGGCAGAAGCCACACAGCTAGCCGAGG...AGGGCTGTACCTGTCCAAATGTGCAGTGCTCACCATCTGAGCACCAGAGTCTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075578.7 |
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| CDS-3UTR CCA 90 bp | ACAACTCCGAGTTCTGAGGACACCCTGCAAGGAGCTGAGCAGATGTGGACAGTGTTTCCCAGAACCACTTaGGCCAACCAGCGCTGTGAC | + |
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Preference number: 4 (lower is better) Translates to: TTPSSEDTLQGAEQMWTVFPRTT*ANQRCD Trigger: GTCACAGCGCTGGTTGGCCCAAGTGGTTCTGGGAAA...CACTGTCCACATCTGCTCAGCTCCTTGCAGGGTGTCCTCAGAACTCGGAGTTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075578.7 |
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| 3UTR CAA 72 bp | CTAGCCTTGGTTCTGCAGTTAGATGTTCTCTGGTGCTaGGAAGGGCAGCCACACTTGCCACACGGTGACTCC | + |
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Preference number: 4 (lower is better) Translates to: LALVLQLDVLWC*EGQPHLPHGDS Trigger: GGAGTCACCGTGTGGCAAGTGTGGCTGCCCTTCCAAGCACCAGAGAACATCTAACTGCAGAACCAAGGCTAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075578.7 |
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| CDS-3UTR GCA 90 bp | CTCCTAGCCTTGGTTCTGCAGTTAGATGTTCTCTGGTGCTTGGAAGGGCAGCCACTGTCATATGGGCACTaGCCATCAGCAGGCCTCCTT | + |
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Preference number: 4 (lower is better) Translates to: LLALVLQLDVLWCLEGQPLSYGH*PSAGLL Trigger: AAGGAGGCCTGCTGATGGGCAGTGCCCATATGACAG...TGGCTGCCCTTCCAAGCACCAGAGAACATCTAACTGCAGAACCAAGGCTAGGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075578.7 |
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| CDS-3UTR TCA 90 bp | TGTCTGTGGACAGGGTATATGATAGAGTCACAGCCCTGCTTCAGTTACCCAATAAAACCCAACTGCAGCTaGCAGTCTCCCGCGCTCGGG | + |
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Preference number: 4 (lower is better) Translates to: CLWTGYMIESQPCFSYPIKPNCS*QSPALG Trigger: CCCGAGCGCGGGAGACTGTCAGCTGCAGTTGGGTTT...TATTGGGTAACTGAAGCAGGGCTGTGACTCTATCATATACCCTGTCCACAGACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075578.7 |
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| CDS-3UTR TCA 90 bp | TGTCTGTGGACAGGGTATATGATAGAGTCACAGCCCTGCTTCAGTTACCCAATACCACCTGCTGGGCTGTaGCCGAGGAGAGGTTGTCAG | + |
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Preference number: 4 (lower is better) Translates to: CLWTGYMIESQPCFSYPIPPAGL*PRRGCQ Trigger: CTGACAACCTCTCCTCGGTCACAGCCCAGCAGGTGG...TATTGGGTAACTGAAGCAGGGCTGTGACTCTATCATATACCCTGTCCACAGACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075578.7 |
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| CDS-3UTR CCA 90 bp | CAACAACTCCGAGTTCTGAGGACACCCTGCAAGGAGCTGAGCAGATGTGGACAGGCCATAGCCCTCGCTTaGGTTGGTATAGATGACATC | + |
|
Preference number: 4 (lower is better) Translates to: QQLRVLRTPCKELSRCGQAIALA*VGIDDI Trigger: GATGTCATCTATACCAACCCAAGCGAGGGCTATGGC...CTGTCCACATCTGCTCAGCTCCTTGCAGGGTGTCCTCAGAACTCGGAGTTGTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075578.7 |
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| 3UTR CAA 72 bp | TCAGACTCTGGTGCTCAGATGGTGAGCACTGCACATTaGGACAGGTACAGCCCTGTAGTGCTCCAGAACTCT | + |
|
Preference number: 4 (lower is better) Translates to: SDSGAQMVSTAH*DRYSPVVLQNS Trigger: AGAGTTCTGGAGCACTACAGGGCTGTACCTGTCCAAATGTGCAGTGCTCACCATCTGAGCACCAGAGTCTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075578.7 |
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| CDS-3UTR TCA 90 bp | CTCCAGGCCCTGTTCTCTGCAATGCTGTTTGGTTTTAAGGTCTCTCAGCCCACGCACAATGCTCTGACCTaGAGACTGCATGAGGTAGAC | + |
|
Preference number: 4 (lower is better) Translates to: LQALFSAMLFGFKVSQPTHNALT*RLHEVD Trigger: GTCTACCTCATGCAGTCTTCAGGTCAGAGCATTGTG...CGTGGGCTGAGAGACCTTAAAACCAAACAGCATTGCAGAGAACAGGGCCTGGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075578.7 |
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| CDS-3UTR CCA 90 bp | ACAACTCCGAGTTCTGAGGACACCCTGCAAGGAGCTGAGCAGATGTGGACAGTGCACTCAGAACAAAGGTaGCCAGACTTGGTGACACAA | + |
|
Preference number: 4 (lower is better) Translates to: TTPSSEDTLQGAEQMWTVHSEQR*PDLVTQ Trigger: TTGTGTCACCAAGTCTGGCCACCTTTGTTCTGAGTG...CACTGTCCACATCTGCTCAGCTCCTTGCAGGGTGTCCTCAGAACTCGGAGTTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075578.7 |
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| CDS-3UTR CCA 90 bp | GGAGCAGGGCTTCCAAACTCTTCCAATCTCTGTTTGAAACAAAGTCTCAAGCGCCGGTCAAGGGCCTCCTaGACCAGGTGCTCATTTTCG | + |
|
Preference number: 4 (lower is better) Translates to: GAGLPNSSNLCLKQSLKRRSRAS*TRCSFS Trigger: CGAAAATGAGCACCTGGTCCAGGAGGCCCTTGACCG...GCGCTTGAGACTTTGTTTCAAACAGAGATTGGAAGAGTTTGGAAGCCCTGCTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075578.7 |
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| CDS-3UTR CCA 90 bp | CAACAACTCCGAGTTCTGAGGACACCCTGCAAGGAGCTGAGCAGATGTGGACAGTTCTGTAAAGCCCATTaGGCTTCAGGAGCAGCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: QQLRVLRTPCKELSRCGQFCKAH*ASGAAL Trigger: AAGAGCTGCTCCTGAAGCCCAATGGGCTTTACAGAA...CTGTCCACATCTGCTCAGCTCCTTGCAGGGTGTCCTCAGAACTCGGAGTTGTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075578.7 |
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| 3UTR CAA 72 bp | ACTCTGACAGCACACACAGGAAGTGAGGTGTTCTGCTaGGCTAGCAAACACTGGAACCCTGCAGTCACTTCA | + |
|
Preference number: 4 (lower is better) Translates to: TLTAHTGSEVFC*ASKHWNPAVTS Trigger: TGAAGTGACTGCAGGGTTCCAGTGTTTGCTAGCCAAGCAGAACACCTCACTTCCTGTGTGTGCTGTCAGAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075578.7 |
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| CDS-3UTR TCA 90 bp | CAATCTCTGTTTGAAACAAAGTCTCAAGCGCTGGCTGGTTTTAAAGCTCAGGTGACAGGAACACACAGGTaGGCACAGCACAGAGCCGAG | + |
|
Preference number: 4 (lower is better) Translates to: QSLFETKSQALAGFKAQVTGTHR*AQHRAE Trigger: CTCGGCTCTGTGCTGTGCTCACCTGTGTGTTCCTGT...CACCTGAGCTTTAAAACCAGCCAGCGCTTGAGACTTTGTTTCAAACAGAGATTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075578.7 |
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| CDS-3UTR TCA 90 bp | CTGTTTCTGTCTGTGGACAGGGTATATGATAGAGTCACAGCCCTGCTTCAGTTACCCAGAAAGCGTACATaGGGAAGGAAGAGAGCTCGC | + |
|
Preference number: 4 (lower is better) Translates to: LFLSVDRVYDRVTALLQLPRKRT*GRKRAR Trigger: GCGAGCTCTCTTCCTTCCTCATGTACGCTTTCTGGG...TAACTGAAGCAGGGCTGTGACTCTATCATATACCCTGTCCACAGACAGAAACAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075578.7 |
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| CDS-3UTR GCA 90 bp | AAAAATAGAAGCTTTCCAGTTTACAGAACGGGACTTCTTCCTTTGGCAAAATGTGGCGTTGGCCACCTCTaGGGCCCTCTCCACCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: KNRSFPVYRTGLLPLAKCGVGHL*GPLHLL Trigger: CAGCAGGTGGAGAGGGCCGCAGAGGTGGCCAACGCC...ACATTTTGCCAAAGGAAGAAGTCCCGTTCTGTAAACTGGAAAGCTTCTATTTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000075578.7 |
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| CDS-3UTR CCA 90 bp | GAGAACAACTCGACTCTGACAGCACACACAGGAAGTGAGGTGTTCTGCTTGGCTAACTCCAGGGCACCCTaGAAGGTTTTCTCATCTAAC | + |
|
Preference number: 4 (lower is better) Translates to: ENNSTLTAHTGSEVFCLANSRAP*KVFSSN Trigger: GTTAGATGAGAAAACCTTCCAGGGTGCCCTGGAGTT...AGCCAAGCAGAACACCTCACTTCCTGTGTGTGCTGTCAGAGTCGAGTTGTTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075578.7 |
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| CDS-3UTR GCA 90 bp | CAATCTCTGTTTGAAACAAAGTCTCAAGCGCTGGCTGGTTTTAAAGCTCAGGTGGCCTCCTGGACCAGGTaGTCATTTTCGGCATCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: QSLFETKSQALAGFKAQVASWTR*SFSASS Trigger: ACTGGATGCCGAAAATGAGCACCTGGTCCAGGAGGC...CACCTGAGCTTTAAAACCAGCCAGCGCTTGAGACTTTGTTTCAAACAGAGATTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075578.7 |
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| CDS-3UTR CCA 90 bp | AAAAATAGAAGCTTTCCAGTTTACAGAACGGGACTTCTTCCTTTGGCAAAATGTACACCAACGGAGGCCTaGGCCCCAGCTCTCAGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: KNRSFPVYRTGLLPLAKCTPTEA*APALRP Trigger: TGGCCTGAGAGCTGGGGCCCAGGCCTCCGTTGGTGT...ACATTTTGCCAAAGGAAGAAGTCCCGTTCTGTAAACTGGAAAGCTTCTATTTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000075578.7 |
||
| CDS-3UTR CCA 90 bp | GGAGCAGGGCTTCCAAACTCTTCCAATCTCTGTTTGAAACAAAGTCTCAAGCGCCCAAGGAGTCCTGTGTaGCTTTGGACAGTTTCCGTA | + |
|
Preference number: 4 (lower is better) Translates to: GAGLPNSSNLCLKQSLKRPRSPV*LWTVSV Trigger: TACGGAAACTGTCCAAAGCCACACAGGACTCCTTGG...GCGCTTGAGACTTTGTTTCAAACAGAGATTGGAAGAGTTTGGAAGCCCTGCTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075578.7 |
||
| CDS-3UTR CCA 90 bp | TGTCTGTGGACAGGGTATATGATAGAGTCACAGCCCTGCTTCAGTTACCCAATAAGTGTCGAAGCCCTGTaGGAAGCTTCGGATGAACTC | + |
|
Preference number: 4 (lower is better) Translates to: CLWTGYMIESQPCFSYPISVEAL*EASDEL Trigger: GAGTTCATCCGAAGCTTCCCACAGGGCTTCGACACT...TATTGGGTAACTGAAGCAGGGCTGTGACTCTATCATATACCCTGTCCACAGACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075578.7 |
||
| CDS-3UTR TCA 90 bp | CAATCTCTGTTTGAAACAAAGTCTCAAGCGCTGGCTGGTTTTAAAGCTCAGGTGCACAATCAGGTTTCCTaGGAGCCCAGCTGCTCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: QSLFETKSQALAGFKAQVHNQVS*EPSCSK Trigger: TTTGGAGCAGCTGGGCTCTCAGGAAACCTGATTGTG...CACCTGAGCTTTAAAACCAGCCAGCGCTTGAGACTTTGTTTCAAACAGAGATTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075578.7 |
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| CDS-3UTR GCA 90 bp | TTTCCAAAGGCTGATGTTCCTTCTGATGCCTTGCCTCTGCAAGAGTCATCATACGCAGGGTATGTGAAGTaGACGTTTCTGAACTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: FPKADVPSDALPLQESSYAGYVK*TFLNSR Trigger: CCTGGAGTTCAGAAACGTGCACTTCACATACCCTGC...GTATGATGACTCTTGCAGAGGCAAGGCATCAGAAGGAACATCAGCCTTTGGAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075578.7 |
||
| CDS-3UTR CCA 90 bp | CAATCTCTGTTTGAAACAAAGTCTCAAGCGCTGGCTGGTTTTAAAGCTCAGGTGCCTCTTGCCTTAGAATaGAGGAGAACAGAGAGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: QSLFETKSQALAGFKAQVPLALE*RRTERC Trigger: GCACCTCTCTGTTCTCCTCCATTCTAAGGCAAGAGG...CACCTGAGCTTTAAAACCAGCCAGCGCTTGAGACTTTGTTTCAAACAGAGATTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075578.7 |
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| 3UTR CAA 72 bp | CATGGAGCAGGGCTTCCAAACTCTTCCAATCTCTGTTaGAAACAAAGTCTCAAGCGCTGGCTGGTTTTAAAG | + |
|
Preference number: 4 (lower is better) Translates to: HGAGLPNSSNLC*KQSLKRWLVLK Trigger: CTTTAAAACCAGCCAGCGCTTGAGACTTTGTTTCAAACAGAGATTGGAAGAGTTTGGAAGCCCTGCTCCATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075578.7 |
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| 3UTR CAA 72 bp | AGAAGCTTTCCAGTTTACAGAACGGGACTTCTTCCTTaGGCAAAATGTATCAGACTCTGGTGCTCAGATGGT | + |
|
Preference number: 4 (lower is better) Translates to: RSFPVYRTGLLP*AKCIRLWCSDG Trigger: ACCATCTGAGCACCAGAGTCTGATACATTTTGCCAAAGGAAGAAGTCCCGTTCTGTAAACTGGAAAGCTTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075578.7 |
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| CDS-3UTR GCA 90 bp | AAAAATAGAAGCTTTCCAGTTTACAGAACGGGACTTCTTCCTTTGGCAAAATGTAGGAGAACAGAGAGGTaGGCAGCCTGTTCACAATGC | + |
|
Preference number: 4 (lower is better) Translates to: KNRSFPVYRTGLLPLAKCRRTER*AACSQC Trigger: GCATTGTGAACAGGCTGCGCACCTCTCTGTTCTCCT...ACATTTTGCCAAAGGAAGAAGTCCCGTTCTGTAAACTGGAAAGCTTCTATTTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000075578.7 |
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| CDS-3UTR GCA 90 bp | TCTGCAAGAGTCATCATACTCAAGGCTGAAAATTATATTATTCAGATTCAGCCTCAGGGCTCTGGCTATTaGAATCCTCTGCTTCTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: SARVIILKAENYIIQIQPQGSGY*NPLLLP Trigger: GGGCAGAAGCAGAGGATTGCAATAGCCAGAGCCCTG...AGGCTGAATCTGAATAATATAATTTTCAGCCTTGAGTATGATGACTCTTGCAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075578.7 |
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| CDS-3UTR CCA 90 bp | TCTGCAAGAGTCATCATACTCAAGGCTGAAAATTATATTATTCAGATTCAGCCTGTTAAAAGGCAGCCGTaGCTGTCTCTCCAGCAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: SARVIILKAENYIIQIQPVKRQP*LSLQQL Trigger: GAGCTGCTGGAGAGACAGCCACGGCTGCCTTTTAAC...AGGCTGAATCTGAATAATATAATTTTCAGCCTTGAGTATGATGACTCTTGCAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075578.7 |
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| CDS-3UTR CCA 90 bp | AAAAATAGAAGCTTTCCAGTTTACAGAACGGGACTTCTTCCTTTGGCAAAATGTTCTTCAGCAGGGCTCTaGCTATTGCAATCCTCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: KNRSFPVYRTGLLPLAKCSSAGL*LLQSSA Trigger: AGCAGAGGATTGCAATAGCCAGAGCCCTGCTGAAGA...ACATTTTGCCAAAGGAAGAAGTCCCGTTCTGTAAACTGGAAAGCTTCTATTTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000075578.7 |
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| CDS-3UTR TCA 90 bp | TCTGCAAGAGTCATCATACTCAAGGCTGAAAATTATATTATTCAGATTCAGCCTCTGTTCACAATGCTCTaGCCTGAAGACTGCATGAGG | + |
|
Preference number: 4 (lower is better) Translates to: SARVIILKAENYIIQIQPLFTML*PEDCMR Trigger: CCTCATGCAGTCTTCAGGTCAGAGCATTGTGAACAG...AGGCTGAATCTGAATAATATAATTTTCAGCCTTGAGTATGATGACTCTTGCAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075578.7 |
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| CDS-3UTR CCA 90 bp | AAAATAGAAGCTTTCCAGTTTACAGAACGGGACTTCTTCCTTTGGCAAAATGTATCACAGATCTTTCCGTaGTCAAGGACAGCAACAAAG | + |
|
Preference number: 4 (lower is better) Translates to: KIEAFQFTERDFFLWQNVSQIFP*SRTATK Trigger: CTTTGTTGCTGTCCTTGACCACGGAAAGATCTGTGA...TACATTTTGCCAAAGGAAGAAGTCCCGTTCTGTAAACTGGAAAGCTTCTATTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075578.7 |
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| CDS GCA 90 bp | CCTGCCAGCACCCAGCACCTGCGGGCCCCCGAGGAGGTGGCCCACTaGCCCACGCCGCCAGGCAGCCCGGATAGGGGCGCGGGAAAGCGG | + |
|
Preference number: 5 (lower is better) Translates to: PASTQHLRAPEEVAH*PTPPGSPDRGAGKR Trigger: CCGCTTTCCCGCGCCCCTATCCGGGCTGCCTGGCGGCGTGGGGCAGTGGGCCACCTCCTCGGGGGCCCGCAGGTGCTGGGTGCTGGCAGG 78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000075578.7 |
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| CDS CCA 90 bp | CCGCGGGACGCCGCTGCGAGTCGTTCCCAAGGTCTCGCACACCGGTaGCAGCTGCACCCTGGAGCCTGGCGAACAGGGGATGTGCGGCGC | + |
|
Preference number: 5 (lower is better) Translates to: PRDAAASRSQGLAHR*QLHPGAWRTGDVRR Trigger: GCGCCGCACATCCCCTGTTCGCCAGGCTCCAGGGTGCAGCTGCCACCGGTGTGCGAGACCTTGGGAACGACTCGCAGCGGCGTCCCGCGG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075578.7 |
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| CDS CCA 90 bp | CGTTCCCAAGGTCTCGCACACCGGTGGCAGCTGCACCCTGGAGCCTaGCGAACAGGGGATGTGCGGCGCGGGGTCCTGCCAGCACCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: RSQGLAHRWQLHPGA*RTGDVRRGVLPAPS Trigger: GCTGGGTGCTGGCAGGACCCCGCGCCGCACATCCCCTGTTCGCCAGGCTCCAGGGTGCAGCTGCCACCGGTGTGCGAGACCTTGGGAACG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075578.7 |
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| CDS CCA 90 bp | TGCGAGTCGTTCCCAAGGTCTCGCACACCGGTGGCAGCTGCACCCTaGAGCCTGGCGAACAGGGGATGTGCGGCGCGGGGTCCTGCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: CESFPRSRTPVAAAP*SLANRGCAARGPAS Trigger: GCTGGCAGGACCCCGCGCCGCACATCCCCTGTTCGCCAGGCTCCAGGGTGCAGCTGCCACCGGTGTGCGAGACCTTGGGAACGACTCGCA 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075578.7 |
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| CDS GCA 90 bp | GCCCTGTGGGAAGCTTCGGATGAACTCAGCGGCGTTGGCCACCTCTaGGGCCCTCTCCACCTGCTGGGCTGTGACCGAGGAGAGGTTGTC | + |
|
Preference number: 5 (lower is better) Translates to: ALWEASDELSGVGHL*GPLHLLGCDRGEVV Trigger: GACAACCTCTCCTCGGTCACAGCCCAGCAGGTGGAGAGGGCCGCAGAGGTGGCCAACGCCGCTGAGTTCATCCGAAGCTTCCCACAGGGC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075578.7 |
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| CDS CCA 90 bp | AAGCCGGCTCGTGCCAAGGCCTCCTTCTGTGCCAGCTGCAGCAACTaGTCCACTCGGCCGGTGTACTTCTCCACTTCCGTCATCTCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: KPARAKASFCASCSN*STRPVYFSTSVISF Trigger: GAAGGAGATGACGGAAGTGGAGAAGTACACCGGCCGAGTGGACCAGTTGCTGCAGCTGGCACAGAAGGAGGCCTTGGCACGAGCCGGCTT 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075578.7 |
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| CDS-3UTR CAA 90 bp | CAGTTAGATGTTCTCTGGTGCTTGGAAGGGCAGCCACACTTGCCACACGGTGACCATCCAGTGCACTGGTaGCTTCATCAAGGAGAAGAA | + |
|
Preference number: 5 (lower is better) Translates to: QLDVLWCLEGQPHLPHGDHPVHW*LHQGEE Trigger: TTCTTCTCCTTGATGAAGCAACCAGTGCACTGGATG...GTCACCGTGTGGCAAGTGTGGCTGCCCTTCCAAGCACCAGAGAACATCTAACTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075578.7 |
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| CDS GCA 72 bp | ACCCAGCACCTGCGGGCCCCCGAGGAGGTGGCCCACTaGCCCACGCCGCCAGGCAGCCCGGATAGGGGCGCG | + |
|
Preference number: 6 (lower is better) Translates to: TQHLRAPEEVAH*PTPPGSPDRGA Trigger: CGCGCCCCTATCCGGGCTGCCTGGCGGCGTGGGGCAGTGGGCCACCTCCTCGGGGGCCCGCAGGTGCTGGGT 79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000075578.7 |
||
| CDS CCA 72 bp | GGTCTCGCACACCGGTGGCAGCTGCACCCTGGAGCCTaGCGAACAGGGGATGTGCGGCGCGGGGTCCTGCCA | + |
|
Preference number: 6 (lower is better) Translates to: GLAHRWQLHPGA*RTGDVRRGVLP Trigger: TGGCAGGACCCCGCGCCGCACATCCCCTGTTCGCCAGGCTCCAGGGTGCAGCTGCCACCGGTGTGCGAGACC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075578.7 |
||
| CDS CCA 72 bp | TTCCCAAGGTCTCGCACACCGGTGGCAGCTGCACCCTaGAGCCTGGCGAACAGGGGATGTGCGGCGCGGGGT | + |
|
Preference number: 6 (lower is better) Translates to: FPRSRTPVAAAP*SLANRGCAARG Trigger: ACCCCGCGCCGCACATCCCCTGTTCGCCAGGCTCCAGGGTGCAGCTGCCACCGGTGTGCGAGACCTTGGGAA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075578.7 |
||
| CDS CAA 72 bp | AAGCCCTGTGGGAAGCTTCGGATGAACTCAGCGGCGTaGGCCACCTCTGCGGCCCTCTCCACCTGCTGGGCT | + |
|
Preference number: 6 (lower is better) Translates to: KPCGKLRMNSAA*ATSAALSTCWA Trigger: AGCCCAGCAGGTGGAGAGGGCCGCAGAGGTGGCCAACGCCGCTGAGTTCATCCGAAGCTTCCCACAGGGCTT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075578.7 |
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| CDS CAA 90 bp | ACAGTGTCGAAGCCCTGTGGGAAGCTTCGGATGAACTCAGCGGCGTaGGCCACCTCTGCGGCCCTCTCCACCTGCTGGGCTGTGACCGAG | + |
|
Preference number: 6 (lower is better) Translates to: TVSKPCGKLRMNSAA*ATSAALSTCWAVTE Trigger: CTCGGTCACAGCCCAGCAGGTGGAGAGGGCCGCAGAGGTGGCCAACGCCGCTGAGTTCATCCGAAGCTTCCCACAGGGCTTCGACACTGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075578.7 |
||
| CDS GCA 72 bp | AAGCCGGCTCGTGCCAAGGCCTCCTTCTGTGCCAGCTaGAGCAACTGGTCCACTCGGCCGGTGTACTTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: KPARAKASFCAS*SNWSTRPVYFS Trigger: GGAGAAGTACACCGGCCGAGTGGACCAGTTGCTGCAGCTGGCACAGAAGGAGGCCTTGGCACGAGCCGGCTT 64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075578.7 |
||
| CDS CCA 72 bp | CGTGCCAAGGCCTCCTTCTGTGCCAGCTGCAGCAACTaGTCCACTCGGCCGGTGTACTTCTCCACTTCCGTC | + |
|
Preference number: 6 (lower is better) Translates to: RAKASFCASCSN*STRPVYFSTSV Trigger: GACGGAAGTGGAGAAGTACACCGGCCGAGTGGACCAGTTGCTGCAGCTGGCACAGAAGGAGGCCTTGGCACG 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075578.7 |
||
| CDS TCA 72 bp | TGCCGTTGGCAGCAGCGCCGCACAGGAACACACAGGTaGGCACAGCACAGAGCCGAGTCAAGCTATCGCCAT | + |
|
Preference number: 6 (lower is better) Translates to: CRWQQRRTGTHR*AQHRAESSYRH Trigger: ATGGCGATAGCTTGACTCGGCTCTGTGCTGTGCTCACCTGTGTGTTCCTGTGCGGCGCTGCTGCCAACGGCA 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075578.7 |
||
| CDS CCA 72 bp | TTCTTATGTTTCCAATCCGCTCCTCGGCTAGCTGTGTaGCTTCTGCCAAGGAGTCCTGTGTGGCTTTGGACA | + |
|
Preference number: 6 (lower is better) Translates to: FLCFQSAPRLAV*LLPRSPVWLWT Trigger: TGTCCAAAGCCACACAGGACTCCTTGGCAGAAGCCACACAGCTAGCCGAGGAGCGGATTGGAAACATAAGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075578.7 |
||
| CDS CCA 72 bp | TATGTGAAGTGCACGTTTCTGAACTCCAGGGCACCCTaGAAGGTTTTCTCATCTAACACCATCCCCTCGTTA | + |
|
Preference number: 6 (lower is better) Translates to: YVKCTFLNSRAP*KVFSSNTIPSL Trigger: TAACGAGGGGATGGTGTTAGATGAGAAAACCTTCCAGGGTGCCCTGGAGTTCAGAAACGTGCACTTCACATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075578.7 |
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