Pregenerated sensors for ABCA9 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000041797Ensembl transcript IDs: ENSMUST00000044850.4
Found 121 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CATATACGCCTGACACTACATGTATGTGGAGATCAGAAAACAGCTTaGGTGATGGTTCTCTCCTTCCACAATTTGGGTCCCACCCAAGGA | + |
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Preference number: 1 (lower is better) Translates to: HIRLTLHVCGDQKTA*VMVLSFHNLGPTQG Trigger: TCCTTGGGTGGGACCCAAATTGTGGAAGGAGAGAACCATCACTCAAGCTGTTTTCTGATCTCCACATACATGTAGTGTCAGGCGTATATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044850.4 |
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| 3UTR TCA 90 bp | TATTGTAAATGCAGTTTAAAACTCCACACTGTGTGCAACGTGACTTaGTTGAGCGTAGTCTGGCTGCGTGTTCTAAGCTGTTTGCACACC | + |
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Preference number: 1 (lower is better) Translates to: YCKCSLKLHTVCNVT*LSVVWLRVLSCLHT Trigger: GGTGTGCAAACAGCTTAGAACACGCAGCCAGACTACGCTCAATCAAGTCACGTTGCACACAGTGTGGAGTTTTAAACTGCATTTACAATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044850.4 |
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| 3UTR-3UTR TCA 90 bp | ACTACATGTATGTGGAGATCAGAAAACAGCTTGAGTGATGGTTCTCTCCTTCCATCTGGACATCAGACTTaGCAACTGGGCACCTTAACC | + |
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Preference number: 2 (lower is better) Translates to: TTCMWRSENSLSDGSLLPSGHQT*QLGTLT Trigger: GGTTAAGGTGCCCAGTTGTCAAGTCTGATGTCCAGA...TGGAAGGAGAGAACCATCACTCAAGCTGTTTTCTGATCTCCACATACATGTAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044850.4 |
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| 3UTR-3UTR GCA 90 bp | GTGCTGTTGGGAAATCAATTGATCCTCTTCTCCCTAAAATCAATATTGTTTACATCAGTCTCTTTAGCATaGTCAGAAGCATCAATACTA | + |
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Preference number: 2 (lower is better) Translates to: VLLGNQLILFSLKSILFTSVSLA*SEASIL Trigger: TAGTATTGATGCTTCTGAGCATGCTAAAGAGACTGA...TGTAAACAATATTGATTTTAGGGAGAAGAGGATCAATTGATTTCCCAACAGCAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044850.4 |
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| 3UTR TCA 72 bp | CACTACATGTATGTGGAGATCAGAAAACAGCTTGAGTaGTGGTTCTCTCCTTCCACAATTTGGGTCCCACCC | + |
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Preference number: 3 (lower is better) Translates to: HYMYVEIRKQLE*WFSPSTIWVPP Trigger: GGGTGGGACCCAAATTGTGGAAGGAGAGAACCATCACTCAAGCTGTTTTCTGATCTCCACATACATGTAGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044850.4 |
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| 3UTR TCA 72 bp | CTGACACTACATGTATGTGGAGATCAGAAAACAGCTTaGGTGATGGTTCTCTCCTTCCACAATTTGGGTCCC | + |
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Preference number: 3 (lower is better) Translates to: LTLHVCGDQKTA*VMVLSFHNLGP Trigger: GGGACCCAAATTGTGGAAGGAGAGAACCATCACTCAAGCTGTTTTCTGATCTCCACATACATGTAGTGTCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044850.4 |
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| 3UTR TCA 72 bp | GTTTGTCCTGAGTGCAGGTATGTAGACATATACGCCTaGCACTACATGTATGTGGAGATCAGAAAACAGCTT | + |
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Preference number: 3 (lower is better) Translates to: VCPECRYVDIYA*HYMYVEIRKQL Trigger: AAGCTGTTTTCTGATCTCCACATACATGTAGTGTCAGGCGTATATGTCTACATACCTGCACTCAGGACAAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044850.4 |
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| 3UTR-3UTR CAA 90 bp | ACTACATGTATGTGGAGATCAGAAAACAGCTTGAGTGATGGTTCTCTCCTTCCACTGTTGGGAAATCAATaGATCCTCTTCTCCCTAAAA | + |
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Preference number: 3 (lower is better) Translates to: TTCMWRSENSLSDGSLLPLLGNQ*ILFSLK Trigger: TTTTAGGGAGAAGAGGATCAATTGATTTCCCAACAG...TGGAAGGAGAGAACCATCACTCAAGCTGTTTTCTGATCTCCACATACATGTAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044850.4 |
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| 3UTR TCA 72 bp | TTGCTCAAAGTCTACTTGAGAAGTCTCCTTGTAAGTTaGGGGCAGTTGATATTCACATACACTATGAAGTTA | + |
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Preference number: 3 (lower is better) Translates to: LLKVYLRSLLVS*GQLIFTYTMKL Trigger: TAACTTCATAGTGTATGTGAATATCAACTGCCCTCAACTTACAAGGAGACTTCTCAAGTAGACTTTGAGCAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044850.4 |
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| CDS-3UTR GCA 90 bp | ACTACATGTATGTGGAGATCAGAAAACAGCTTGAGTGATGGTTCTCTCCTTCCAGCGAACCTTCGCGACTaGGCAGAGCTGCTGCCTCCA | + |
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Preference number: 4 (lower is better) Translates to: TTCMWRSENSLSDGSLLPANLRD*AELLPP Trigger: TGGAGGCAGCAGCTCTGCGCAGTCGCGAAGGTTCGC...TGGAAGGAGAGAACCATCACTCAAGCTGTTTTCTGATCTCCACATACATGTAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044850.4 |
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| CDS-3UTR GCA 90 bp | AGGCACAGTGATGCTCTTAAATATACTGTCTGTAAGAGGGATGTGAGCTTGAGGATCGCCTGCCACATTTaGTGCTGCCCTTCGGGGTCC | + |
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Preference number: 4 (lower is better) Translates to: RHSDALKYTVCKRDVSLRIACHI*CCPSGS Trigger: GGACCCCGAAGGGCAGCAGCAAATGTGGCAGGCGAT...CCTCAAGCTCACATCCCTCTTACAGACAGTATATTTAAGAGCATCACTGTGCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044850.4 |
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| CDS-3UTR GCA 90 bp | TATACGCCTGACACTACATGTATGTGGAGATCAGAAAACAGCTTGAGTGATGGTGCCTCCACAGCGCCATaGCACTCACTGAGCTTCCTG | + |
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Preference number: 4 (lower is better) Translates to: YTPDTTCMWRSENSLSDGASTAP*HSLSFL Trigger: CAGGAAGCTCAGTGAGTGGCATGGCGCTGTGGAGGC...ACCATCACTCAAGCTGTTTTCTGATCTCCACATACATGTAGTGTCAGGCGTATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044850.4 |
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| CDS-3UTR GCA 90 bp | AGGCACAGTGATGCTCTTAAATATACTGTCTGTAAGAGGGATGTGAGCTTGAGGACAGCGCCTCTTCTGTaGCATTTCTGGTCCCCAGGG | + |
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Preference number: 4 (lower is better) Translates to: RHSDALKYTVCKRDVSLRTAPLL*HFWSPG Trigger: CCCTGGGGACCAGAAATGGCACAGAAGAGGCGCTGT...CCTCAAGCTCACATCCCTCTTACAGACAGTATATTTAAGAGCATCACTGTGCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044850.4 |
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| CDS-3UTR TCA 90 bp | ACTACATGTATGTGGAGATCAGAAAACAGCTTGAGTGATGGTTCTCTCCTTCCATCGCAATGTAAGGGGTaGGGCTGGCAGCCACTGGTA | + |
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Preference number: 4 (lower is better) Translates to: TTCMWRSENSLSDGSLLPSQCKG*GWQPLV Trigger: TACCAGTGGCTGCCAGCCTCACCCCTTACATTGCGA...TGGAAGGAGAGAACCATCACTCAAGCTGTTTTCTGATCTCCACATACATGTAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044850.4 |
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| CDS-3UTR TCA 90 bp | AGGCACAGTGATGCTCTTAAATATACTGTCTGTAAGAGGGATGTGAGCTTGAGGAGACGGGTAAAGGCCTaGAGTCCACAGCTGGGAAAG | + |
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Preference number: 4 (lower is better) Translates to: RHSDALKYTVCKRDVSLRRRVKA*SPQLGK Trigger: CTTTCCCAGCTGTGGACTTCAGGCCTTTACCCGTCT...CCTCAAGCTCACATCCCTCTTACAGACAGTATATTTAAGAGCATCACTGTGCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044850.4 |
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| CDS-3UTR CCA 90 bp | TATACGCCTGACACTACATGTATGTGGAGATCAGAAAACAGCTTGAGTGATGGTTCCTGCCGAGCAGCCTaGGGGAACAGTCTCATGATC | + |
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Preference number: 4 (lower is better) Translates to: YTPDTTCMWRSENSLSDGSCRAA*GNSLMI Trigger: GATCATGAGACTGTTCCCCCAGGCTGCTCGGCAGGA...ACCATCACTCAAGCTGTTTTCTGATCTCCACATACATGTAGTGTCAGGCGTATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044850.4 |
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| CDS-3UTR TCA 90 bp | ACTACATGTATGTGGAGATCAGAAAACAGCTTGAGTGATGGTTCTCTCCTTCCAAGCGCCCACATTTGCTaGCCCAGTCTCAAGTGTCTC | + |
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Preference number: 4 (lower is better) Translates to: TTCMWRSENSLSDGSLLPSAHIC*PSLKCL Trigger: GAGACACTTGAGACTGGGTCAGCAAATGTGGGCGCT...TGGAAGGAGAGAACCATCACTCAAGCTGTTTTCTGATCTCCACATACATGTAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044850.4 |
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| CDS-3UTR GCA 90 bp | ACTACATGTATGTGGAGATCAGAAAACAGCTTGAGTGATGGTTCTCTCCTTCCAAGCTCCAGGAAGACCTaGTCCAGAGTAGACTGTGAG | + |
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Preference number: 4 (lower is better) Translates to: TTCMWRSENSLSDGSLLPSSRKT*SRVDCE Trigger: CTCACAGTCTACTCTGGAGCAGGTCTTCCTGGAGCT...TGGAAGGAGAGAACCATCACTCAAGCTGTTTTCTGATCTCCACATACATGTAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044850.4 |
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| CDS-3UTR TCA 90 bp | AGGCACAGTGATGCTCTTAAATATACTGTCTGTAAGAGGGATGTGAGCTTGAGGGTTTGTATAACGCTGTaGATCCCAGACTTCCCCAGA | + |
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Preference number: 4 (lower is better) Translates to: RHSDALKYTVCKRDVSLRVCITL*IPDFPR Trigger: TCTGGGGAAGTCTGGGATTCACAGCGTTATACAAAC...CCTCAAGCTCACATCCCTCTTACAGACAGTATATTTAAGAGCATCACTGTGCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044850.4 |
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| CDS-3UTR CCA 90 bp | AGGCACAGTGATGCTCTTAAATATACTGTCTGTAAGAGGGATGTGAGCTTGAGGCTGTACGTTGGACTGTaGACAAACTCCAGTGATCGT | + |
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Preference number: 4 (lower is better) Translates to: RHSDALKYTVCKRDVSLRLYVGL*TNSSDR Trigger: ACGATCACTGGAGTTTGTCCACAGTCCAACGTACAG...CCTCAAGCTCACATCCCTCTTACAGACAGTATATTTAAGAGCATCACTGTGCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044850.4 |
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| CDS-3UTR CCA 90 bp | AGGCACAGTGATGCTCTTAAATATACTGTCTGTAAGAGGGATGTGAGCTTGAGGGTGCTTCTGTCGGTCTaGATGCGTTCAGAAGAGTTA | + |
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Preference number: 4 (lower is better) Translates to: RHSDALKYTVCKRDVSLRVLLSV*MRSEEL Trigger: TAACTCTTCTGAACGCATCCAGACCGACAGAAGCAC...CCTCAAGCTCACATCCCTCTTACAGACAGTATATTTAAGAGCATCACTGTGCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044850.4 |
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| 3UTR CAA 72 bp | CCTGACACTACATGTATGTGGAGATCAGAAAACAGCTaGAGTGATGGTTCTCTCCTTCCACAATTTGGGTCC | + |
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Preference number: 4 (lower is better) Translates to: PDTTCMWRSENS*SDGSLLPQFGS Trigger: GGACCCAAATTGTGGAAGGAGAGAACCATCACTCAAGCTGTTTTCTGATCTCCACATACATGTAGTGTCAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044850.4 |
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| CDS-3UTR TCA 90 bp | AGGCACAGTGATGCTCTTAAATATACTGTCTGTAAGAGGGATGTGAGCTTGAGGGAAGGAACACCACCATaGAACCAGTTAAGACGACAA | + |
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Preference number: 4 (lower is better) Translates to: RHSDALKYTVCKRDVSLREGTPP*NQLRRQ Trigger: TTGTCGTCTTAACTGGTTTCATGGTGGTGTTCCTTC...CCTCAAGCTCACATCCCTCTTACAGACAGTATATTTAAGAGCATCACTGTGCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044850.4 |
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| CDS-3UTR TCA 90 bp | ACTACATGTATGTGGAGATCAGAAAACAGCTTGAGTGATGGTTCTCTCCTTCCAGTGCTTTTTGACCAGTaGCGTTATACCCTCTGGATC | + |
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Preference number: 4 (lower is better) Translates to: TTCMWRSENSLSDGSLLPVLFDQ*RYTLWI Trigger: GATCCAGAGGGTATAACGTCACTGGTCAAAAAGCAC...TGGAAGGAGAGAACCATCACTCAAGCTGTTTTCTGATCTCCACATACATGTAGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044850.4 |
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| CDS-3UTR TCA 90 bp | TATACGCCTGACACTACATGTATGTGGAGATCAGAAAACAGCTTGAGTGATGGTTGGTGGCTGTCCTGGTaGAAGGAAATACATACTTGG | + |
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Preference number: 4 (lower is better) Translates to: YTPDTTCMWRSENSLSDGWWLSW*KEIHTW Trigger: CCAAGTATGTATTTCCTTTCACCAGGACAGCCACCA...ACCATCACTCAAGCTGTTTTCTGATCTCCACATACATGTAGTGTCAGGCGTATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044850.4 |
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| CDS-3UTR TCA 90 bp | TATACGCCTGACACTACATGTATGTGGAGATCAGAAAACAGCTTGAGTGATGGTACGCTACGGAAAATCTaGGAGCCTTTTCTTCACCCA | + |
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Preference number: 4 (lower is better) Translates to: YTPDTTCMWRSENSLSDGTLRKI*EPFLHP Trigger: TGGGTGAAGAAAAGGCTCTCAGATTTTCCGTAGCGT...ACCATCACTCAAGCTGTTTTCTGATCTCCACATACATGTAGTGTCAGGCGTATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000044850.4 |
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| CDS-3UTR TCA 90 bp | AAAACAAATACTGTGCTGTTGGGAAATCAATTGATCCTCTTCTCCCTAAAATCACCCGCTCTGTGTTTGTaGAAGTGGCTCGGATCGCCT | + |
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Preference number: 4 (lower is better) Translates to: KTNTVLLGNQLILFSLKSPALCL*KWLGSP Trigger: AGGCGATCCGAGCCACTTTCACAAACACAGAGCGGG...TGATTTTAGGGAGAAGAGGATCAATTGATTTCCCAACAGCACAGTATTTGTTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044850.4 |
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| CDS-3UTR TCA 90 bp | TATACGCCTGACACTACATGTATGTGGAGATCAGAAAACAGCTTGAGTGATGGTTTGTTCTTCCTTTCATaGATGGAGCTGAGGCCACTT | + |
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Preference number: 4 (lower is better) Translates to: YTPDTTCMWRSENSLSDGLFFLS*MELRPL Trigger: AAGTGGCCTCAGCTCCATTCATGAAAGGAAGAACAA...ACCATCACTCAAGCTGTTTTCTGATCTCCACATACATGTAGTGTCAGGCGTATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044850.4 |
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| CDS-3UTR TCA 90 bp | TATACGCCTGACACTACATGTATGTGGAGATCAGAAAACAGCTTGAGTGATGGTAACAATGGAGACCGTTaGTGTCCGTACTTACTGAGT | + |
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Preference number: 4 (lower is better) Translates to: YTPDTTCMWRSENSLSDGNNGDR*CPYLLS Trigger: ACTCAGTAAGTACGGACATCAACGGTCTCCATTGTT...ACCATCACTCAAGCTGTTTTCTGATCTCCACATACATGTAGTGTCAGGCGTATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044850.4 |
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| CDS-3UTR TCA 90 bp | ACTACATGTATGTGGAGATCAGAAAACAGCTTGAGTGATGGTTCTCTCCTTCCATCAGTGACTTCTTCCTaGGGTATCTTTCCAGACATC | + |
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Preference number: 4 (lower is better) Translates to: TTCMWRSENSLSDGSLLPSVTSS*GIFPDI Trigger: GATGTCTGGAAAGATACCTCAGGAAGAAGTCACTGA...TGGAAGGAGAGAACCATCACTCAAGCTGTTTTCTGATCTCCACATACATGTAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044850.4 |
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| CDS-3UTR CCA 90 bp | AGGCACAGTGATGCTCTTAAATATACTGTCTGTAAGAGGGATGTGAGCTTGAGGTCTTCCATCACGGAGTaGTTTGTGATCATCTCAATG | + |
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Preference number: 4 (lower is better) Translates to: RHSDALKYTVCKRDVSLRSSITE*FVIISM Trigger: CATTGAGATGATCACAAACCACTCCGTGATGGAAGA...CCTCAAGCTCACATCCCTCTTACAGACAGTATATTTAAGAGCATCACTGTGCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044850.4 |
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| CDS-3UTR CCA 90 bp | AGGCACAGTGATGCTCTTAAATATACTGTCTGTAAGAGGGATGTGAGCTTGAGGCATTCAGGGTTGTCATaGAAACGCCATAATCCTCAA | + |
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Preference number: 4 (lower is better) Translates to: RHSDALKYTVCKRDVSLRHSGLS*KRHNPQ Trigger: TTGAGGATTATGGCGTTTCCATGACAACCCTGAATG...CCTCAAGCTCACATCCCTCTTACAGACAGTATATTTAAGAGCATCACTGTGCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044850.4 |
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| CDS-3UTR CCA 90 bp | AGGCACAGTGATGCTCTTAAATATACTGTCTGTAAGAGGGATGTGAGCTTGAGGTTGCTCTTCAGATGTTaGATAGAACCAATGCACCTC | + |
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Preference number: 4 (lower is better) Translates to: RHSDALKYTVCKRDVSLRLLFRC*IEPMHL Trigger: GAGGTGCATTGGTTCTATCCAACATCTGAAGAGCAA...CCTCAAGCTCACATCCCTCTTACAGACAGTATATTTAAGAGCATCACTGTGCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044850.4 |
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| CDS-3UTR GCA 90 bp | AGGCACAGTGATGCTCTTAAATATACTGTCTGTAAGAGGGATGTGAGCTTGAGGGCTGAATGGTCTTTGTaGTCTTTTGTTTTAGGGATC | + |
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Preference number: 4 (lower is better) Translates to: RHSDALKYTVCKRDVSLRAEWSL*SFVLGI Trigger: GATCCCTAAAACAAAAGAGCACAAAGACCATTCAGC...CCTCAAGCTCACATCCCTCTTACAGACAGTATATTTAAGAGCATCACTGTGCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044850.4 |
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| CDS-3UTR GCA 90 bp | AGGCACAGTGATGCTCTTAAATATACTGTCTGTAAGAGGGATGTGAGCTTGAGGTGGTATCCAGAAAAATaGGTTGCTCATGAATCCGTA | + |
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Preference number: 4 (lower is better) Translates to: RHSDALKYTVCKRDVSLRWYPEK*VAHESV Trigger: TACGGATTCATGAGCAACGCATTTTTCTGGATACCA...CCTCAAGCTCACATCCCTCTTACAGACAGTATATTTAAGAGCATCACTGTGCCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044850.4 |
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| CDS-3UTR GCA 90 bp | TATACGCCTGACACTACATGTATGTGGAGATCAGAAAACAGCTTGAGTGATGGTGAGGGACTAAAAAGGTaGAGATTAGCAGCTCTAGAA | + |
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Preference number: 4 (lower is better) Translates to: YTPDTTCMWRSENSLSDGEGLKR*RLAALE Trigger: TTCTAGAGCTGCTAATCTGCACCTTTTTAGTCCCTC...ACCATCACTCAAGCTGTTTTCTGATCTCCACATACATGTAGTGTCAGGCGTATA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044850.4 |
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| CDS-3UTR GCA 90 bp | TCAGCAAGTCCAGCATTAATGTCTCTTTTTAACTTTAAAGGCTTAGAGCCTTTGGCCTTCAAGTGGTCCTaGAGTTTAAGGGCATTCACC | + |
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Preference number: 4 (lower is better) Translates to: SASPALMSLFNFKGLEPLAFKWS*SLRAFT Trigger: GGTGAATGCCCTTAAACTGCAGGACCACTTGAAGGC...CAAAGGCTCTAAGCCTTTAAAGTTAAAAAGAGACATTAATGCTGGACTTGCTGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044850.4 |
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| CDS-3UTR CCA 90 bp | ACTACATGTATGTGGAGATCAGAAAACAGCTTGAGTGATGGTTCTCTCCTTCCAATCCCGGTAAAGGTCTaGAAACTTGTTTGTCCTTTC | + |
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Preference number: 4 (lower is better) Translates to: TTCMWRSENSLSDGSLLPIPVKV*KLVCPF Trigger: GAAAGGACAAACAAGTTTCCAGACCTTTACCGGGAT...TGGAAGGAGAGAACCATCACTCAAGCTGTTTTCTGATCTCCACATACATGTAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044850.4 |
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| CDS-3UTR CCA 90 bp | ACTACATGTATGTGGAGATCAGAAAACAGCTTGAGTGATGGTTCTCTCCTTCCAAGATGTTCCAAAAGTTaGGGGACAAAGCTAATGCCA | + |
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Preference number: 4 (lower is better) Translates to: TTCMWRSENSLSDGSLLPRCSKS*GTKLMP Trigger: TGGCATTAGCTTTGTCCCCCAACTTTTGGAACATCT...TGGAAGGAGAGAACCATCACTCAAGCTGTTTTCTGATCTCCACATACATGTAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000044850.4 |
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| CDS-3UTR TCA 90 bp | ACTACATGTATGTGGAGATCAGAAAACAGCTTGAGTGATGGTTCTCTCCTTCCATTTCATGAATGGAGCTaGGGCCACTTTGTTCATTAT | + |
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Preference number: 4 (lower is better) Translates to: TTCMWRSENSLSDGSLLPFHEWS*GHFVHY Trigger: ATAATGAACAAAGTGGCCTCAGCTCCATTCATGAAA...TGGAAGGAGAGAACCATCACTCAAGCTGTTTTCTGATCTCCACATACATGTAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044850.4 |
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| CDS-3UTR TCA 90 bp | AAAACAAATACTGTGCTGTTGGGAAATCAATTGATCCTCTTCTCCCTAAAATCAGGTTTTCTCGCACGGTaGGAAAGCCAAACTGTACGT | + |
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Preference number: 4 (lower is better) Translates to: KTNTVLLGNQLILFSLKSGFLAR*ESQTVR Trigger: ACGTACAGTTTGGCTTTCTCACCGTGCGAGAAAACC...TGATTTTAGGGAGAAGAGGATCAATTGATTTCCCAACAGCACAGTATTTGTTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000044850.4 |
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| CDS-3UTR TCA 90 bp | TCAGCAAGTCCAGCATTAATGTCTCTTTTTAACTTTAAAGGCTTAGAGCCTTTGCGGAGATGTGCTTTTTaGCCAGTGACGTTATACCCT | + |
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Preference number: 4 (lower is better) Translates to: SASPALMSLFNFKGLEPLRRCAF*PVTLYP Trigger: AGGGTATAACGTCACTGGTCAAAAAGCACATCTCCG...CAAAGGCTCTAAGCCTTTAAAGTTAAAAAGAGACATTAATGCTGGACTTGCTGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000044850.4 |
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| CDS-3UTR TCA 90 bp | GTGCTGTTGGGAAATCAATTGATCCTCTTCTCCCTAAAATCAATATTGTTTACAAGGGTCCACTCTCAGTaGCTTCTTCCTGAGGTATCT | + |
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Preference number: 4 (lower is better) Translates to: VLLGNQLILFSLKSILFTRVHSQ*LLPEVS Trigger: AGATACCTCAGGAAGAAGTCACTGAGAGTGGACCCT...TGTAAACAATATTGATTTTAGGGAGAAGAGGATCAATTGATTTCCCAACAGCAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044850.4 |
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| CDS-3UTR GCA 90 bp | TCAGCAAGTCCAGCATTAATGTCTCTTTTTAACTTTAAAGGCTTAGAGCCTTTGCTTCCGCAGACAGCTTaGAATGATGACTGGTTTCTC | + |
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Preference number: 4 (lower is better) Translates to: SASPALMSLFNFKGLEPLLPQTA*NDDWFL Trigger: GAGAAACCAGTCATCATTGCAAGCTGTCTGCGGAAG...CAAAGGCTCTAAGCCTTTAAAGTTAAAAAGAGACATTAATGCTGGACTTGCTGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044850.4 |
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| CDS-3UTR CCA 90 bp | AAAACAAATACTGTGCTGTTGGGAAATCAATTGATCCTCTTCTCCCTAAAATCAGTTGCAACTCCTCCTTaGGCAATAAAAGGCGGCATC | + |
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Preference number: 4 (lower is better) Translates to: KTNTVLLGNQLILFSLKSVATPP*AIKGGI Trigger: GATGCCGCCTTTTATTGCCCAAGGAGGAGTTGCAAC...TGATTTTAGGGAGAAGAGGATCAATTGATTTCCCAACAGCACAGTATTTGTTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000044850.4 |
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| CDS-3UTR TCA 90 bp | AAAACAAATACTGTGCTGTTGGGAAATCAATTGATCCTCTTCTCCCTAAAATCAGTGAGCCAATCAGTGTaGAAGGAGGGACTAAAAAGG | + |
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Preference number: 4 (lower is better) Translates to: KTNTVLLGNQLILFSLKSVSQSV*KEGLKR Trigger: CCTTTTTAGTCCCTCCTTTCACACTGATTGGCTCAC...TGATTTTAGGGAGAAGAGGATCAATTGATTTCCCAACAGCACAGTATTTGTTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000044850.4 |
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| CDS-3UTR TCA 90 bp | AAAACAAATACTGTGCTGTTGGGAAATCAATTGATCCTCTTCTCCCTAAAATCATTCTCGGAGAAATTCTaGACACAGGGTCCACTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: KTNTVLLGNQLILFSLKSFSEKF*TQGPLS Trigger: TGAGAGTGGACCCTGTGTTCAGAATTTCTCCGAGAA...TGATTTTAGGGAGAAGAGGATCAATTGATTTCCCAACAGCACAGTATTTGTTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044850.4 |
||
| CDS-3UTR CCA 90 bp | GTGCTGTTGGGAAATCAATTGATCCTCTTCTCCCTAAAATCAATATTGTTTACAAGCCAAACTGTACGTTaGACTGTGGACAAACTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: VLLGNQLILFSLKSILFTSQTVR*TVDKLQ Trigger: CTGGAGTTTGTCCACAGTCCAACGTACAGTTTGGCT...TGTAAACAATATTGATTTTAGGGAGAAGAGGATCAATTGATTTCCCAACAGCAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044850.4 |
||
| CDS-3UTR CCA 90 bp | GTGCTGTTGGGAAATCAATTGATCCTCTTCTCCCTAAAATCAATATTGTTTACATTGATGACCAGTAAGTaGGTCAGAGGATCCTGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: VLLGNQLILFSLKSILFTLMTSK*VRGSCG Trigger: ACCACAGGATCCTCTGACCCACTTACTGGTCATCAA...TGTAAACAATATTGATTTTAGGGAGAAGAGGATCAATTGATTTCCCAACAGCAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044850.4 |
||
| CDS-3UTR CCA 90 bp | GTGCTGTTGGGAAATCAATTGATCCTCTTCTCCCTAAAATCAATATTGTTTACATTACAGCTCTTCCTGTaGGAGGAGCTTCCATTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: VLLGNQLILFSLKSILFTLQLFL*EELPFH Trigger: GTGAAATGGAAGCTCCTCCCACAGGAAGAGCTGTAA...TGTAAACAATATTGATTTTAGGGAGAAGAGGATCAATTGATTTCCCAACAGCAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044850.4 |
||
| 3UTR CAA 72 bp | ACAGACTTGGTAAATAAATACATACAAAGCCAGTCCTaGGACCTAAGAGTACCCCTCCTCTGCATTACTTTT | + |
|
Preference number: 4 (lower is better) Translates to: TDLVNKYIQSQS*DLRVPLLCITF Trigger: AAAAGTAATGCAGAGGAGGGGTACTCTTAGGTCCAAGGACTGGCTTTGTATGTATTTATTTACCAAGTCTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044850.4 |
||
| CDS-3UTR GCA 90 bp | GTGCTGTTGGGAAATCAATTGATCCTCTTCTCCCTAAAATCAATATTGTTTACATCTAAAGACAACACTTaGTCCAGCTCAACGAGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: VLLGNQLILFSLKSILFTSKDNT*SSSTRL Trigger: AAGCCTCGTTGAGCTGGAGCAAGTGTTGTCTTTAGA...TGTAAACAATATTGATTTTAGGGAGAAGAGGATCAATTGATTTCCCAACAGCAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044850.4 |
||
| CDS-3UTR CCA 90 bp | AAAACAAATACTGTGCTGTTGGGAAATCAATTGATCCTCTTCTCCCTAAAATCATTGTTCATTATCTCATaGGTGGCTTCGGACTCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: KTNTVLLGNQLILFSLKSLFIIS*VASDSG Trigger: TCCTGAGTCCGAAGCCACCCATGAGATAATGAACAA...TGATTTTAGGGAGAAGAGGATCAATTGATTTCCCAACAGCACAGTATTTGTTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044850.4 |
||
| CDS-3UTR GCA 90 bp | TCAGCAAGTCCAGCATTAATGTCTCTTTTTAACTTTAAAGGCTTAGAGCCTTTGGTAAGGTATCAGCAATaGCAGAAATACGAGTTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: SASPALMSLFNFKGLEPLVRYQQ*QKYELR Trigger: TCTCAACTCGTATTTCTGGCATTGCTGATACCTTAC...CAAAGGCTCTAAGCCTTTAAAGTTAAAAAGAGACATTAATGCTGGACTTGCTGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044850.4 |
||
| CDS-3UTR GCA 90 bp | AAAACAAATACTGTGCTGTTGGGAAATCAATTGATCCTCTTCTCCCTAAAATCACCAGCAGGTAATCTTTaGCGAATTTGCTCTTCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: KTNTVLLGNQLILFSLKSPAGNL*RICSSD Trigger: ATCTGAAGAGCAAATTCGGCAAAGATTACCTGCTGG...TGATTTTAGGGAGAAGAGGATCAATTGATTTCCCAACAGCACAGTATTTGTTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044850.4 |
||
| CDS-3UTR CCA 90 bp | AAAACAAATACTGTGCTGTTGGGAAATCAATTGATCCTCTTCTCCCTAAAATCACTTCAGGAAAAACAATaGAGACCGTTGATGTCCGTA | + |
|
Preference number: 4 (lower is better) Translates to: KTNTVLLGNQLILFSLKSLQEKQ*RPLMSV Trigger: TACGGACATCAACGGTCTCCATTGTTTTTCCTGAAG...TGATTTTAGGGAGAAGAGGATCAATTGATTTCCCAACAGCACAGTATTTGTTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000044850.4 |
||
| CDS-3UTR TCA 90 bp | TCAGCAAGTCCAGCATTAATGTCTCTTTTTAACTTTAAAGGCTTAGAGCCTTTGCTTTTCCCAGAAGGCTaGGTTTTCACAAATCATTTT | + |
|
Preference number: 4 (lower is better) Translates to: SASPALMSLFNFKGLEPLLFPEG*VFTNHF Trigger: AAAATGATTTGTGAAAACTCAGCCTTCTGGGAAAAG...CAAAGGCTCTAAGCCTTTAAAGTTAAAAAGAGACATTAATGCTGGACTTGCTGA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000044850.4 |
||
| CDS-3UTR CCA 90 bp | TCAGCAAGTCCAGCATTAATGTCTCTTTTTAACTTTAAAGGCTTAGAGCCTTTGAGTCTAGCTCATTCATaGATTTTTCATCAGGACATG | + |
|
Preference number: 4 (lower is better) Translates to: SASPALMSLFNFKGLEPLSLAHS*IFHQDM Trigger: CATGTCCTGATGAAAAATCCATGAATGAGCTAGACT...CAAAGGCTCTAAGCCTTTAAAGTTAAAAAGAGACATTAATGCTGGACTTGCTGA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000044850.4 |
||
| CDS-3UTR CCA 90 bp | GTGCTGTTGGGAAATCAATTGATCCTCTTCTCCCTAAAATCAATATTGTTTACATCACAAGGAGCTGAATaGTCTTTGTGCTCTTTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: VLLGNQLILFSLKSILFTSQGAE*SLCSFV Trigger: AACAAAAGAGCACAAAGACCATTCAGCTCCTTGTGA...TGTAAACAATATTGATTTTAGGGAGAAGAGGATCAATTGATTTCCCAACAGCAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044850.4 |
||
| CDS-3UTR CCA 90 bp | GTGCTGTTGGGAAATCAATTGATCCTCTTCTCCCTAAAATCAATATTGTTTACAAGCAGTTTAGTCTTTTaGCATTACACGCTACGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: VLLGNQLILFSLKSILFTSSLVF*HYTLRK Trigger: TTTCCGTAGCGTGTAATGCCAAAAGACTAAACTGCT...TGTAAACAATATTGATTTTAGGGAGAAGAGGATCAATTGATTTCCCAACAGCAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044850.4 |
||
| CDS-3UTR GCA 90 bp | TCAGCAAGTCCAGCATTAATGTCTCTTTTTAACTTTAAAGGCTTAGAGCCTTTGTTTTTCATCAGGACATaGCACAATTGTTCTTCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: SASPALMSLFNFKGLEPLFFIRT*HNCSSF Trigger: AAAGGAAGAACAATTGTGGCATGTCCTGATGAAAAA...CAAAGGCTCTAAGCCTTTAAAGTTAAAAAGAGACATTAATGCTGGACTTGCTGA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000044850.4 |
||
| CDS-3UTR GCA 90 bp | AAAACAAATACTGTGCTGTTGGGAAATCAATTGATCCTCTTCTCCCTAAAATCAACACTGTCCATTATTTaGATGAGAAAGAGAATGAGG | + |
|
Preference number: 4 (lower is better) Translates to: KTNTVLLGNQLILFSLKSTLSII*MRKRMR Trigger: CCTCATTCTCTTTCTCATGCAAATAATGGACAGTGT...TGATTTTAGGGAGAAGAGGATCAATTGATTTCCCAACAGCACAGTATTTGTTTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044850.4 |
||
| CDS-3UTR CCA 90 bp | AAAACAAATACTGTGCTGTTGGGAAATCAATTGATCCTCTTCTCCCTAAAATCAGTTAAGACGACAACTTaGGCAGATTTCACAATAAGA | + |
|
Preference number: 4 (lower is better) Translates to: KTNTVLLGNQLILFSLKSVKTTT*ADFTIR Trigger: TCTTATTGTGAAATCTGCCCAAGTTGTCGTCTTAAC...TGATTTTAGGGAGAAGAGGATCAATTGATTTCCCAACAGCACAGTATTTGTTTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044850.4 |
||
| CDS GCA 90 bp | TTCTTGAGCTTGAAGAAGCGAACCTTCGCGACTGCGCAGAGCTGCTaGCTCCACAGCGCCATGCCACTCACTGAGCTTCCTGACGAATCT | + |
|
Preference number: 5 (lower is better) Translates to: FLSLKKRTFATAQSC*LHSAMPLTELPDES Trigger: AGATTCGTCAGGAAGCTCAGTGAGTGGCATGGCGCTGTGGAGGCAGCAGCTCTGCGCAGTCGCGAAGGTTCGCTTCTTCAAGCTCAAGAA 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044850.4 |
||
| CDS GCA 90 bp | TCATTCTTGAGCTTGAAGAAGCGAACCTTCGCGACTGCGCAGAGCTaGTGCCTCCACAGCGCCATGCCACTCACTGAGCTTCCTGACGAA | + |
|
Preference number: 5 (lower is better) Translates to: SFLSLKKRTFATAQS*CLHSAMPLTELPDE Trigger: TTCGTCAGGAAGCTCAGTGAGTGGCATGGCGCTGTGGAGGCAGCAGCTCTGCGCAGTCGCGAAGGTTCGCTTCTTCAAGCTCAAGAATGA 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044850.4 |
||
| CDS GCA 90 bp | GCCATGCCACTCACTGAGCTTCCTGACGAATCTAAAGACAACACTTaGTCCAGCTCAACGAGGCTTTCCATGTCTCTTGCCCCATCGCTT | + |
|
Preference number: 5 (lower is better) Translates to: AMPLTELPDESKDNT*SSSTRLSMSLAPSL Trigger: AAGCGATGGGGCAAGAGACATGGAAAGCCTCGTTGAGCTGGAGCAAGTGTTGTCTTTAGATTCGTCAGGAAGCTCAGTGAGTGGCATGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044850.4 |
||
| CDS-3UTR CAA 90 bp | AGGCACAGTGATGCTCTTAAATATACTGTCTGTAAGAGGGATGTGAGCTTGAGGGATCGCCTGCCACATTaGCTGCTGCCCTTCGGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: RHSDALKYTVCKRDVSLRDRLPH*LLPFGV Trigger: GACCCCGAAGGGCAGCAGCAAATGTGGCAGGCGATC...CCTCAAGCTCACATCCCTCTTACAGACAGTATATTTAAGAGCATCACTGTGCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044850.4 |
||
| CDS TCA 90 bp | TTCATCAGGACATGCCACAATTGTTCTTCCTTTCATGAATGGAGCTaGGGCCACTTTGTTCATTATCTCATGGGTGGCTTCGGACTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: FIRTCHNCSSFHEWS*GHFVHYLMGGFGLR Trigger: CCTGAGTCCGAAGCCACCCATGAGATAATGAACAAAGTGGCCTCAGCTCCATTCATGAAAGGAAGAACAATTGTGGCATGTCCTGATGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044850.4 |
||
| CDS GCA 90 bp | CGCAATGTAAGGGGTGAGGCTGGCAGCCACTGGTATCCAGAAAAATaGGTTGCTCATGAATCCGTACTCATAAAGCATGTGTTCTTCAAA | + |
|
Preference number: 5 (lower is better) Translates to: RNVRGEAGSHWYPEK*VAHESVLIKHVFFK Trigger: TTTGAAGAACACATGCTTTATGAGTACGGATTCATGAGCAACGCATTTTTCTGGATACCAGTGGCTGCCAGCCTCACCCCTTACATTGCG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044850.4 |
||
| CDS CCA 90 bp | ACAAAGTTATCGATGCTTGAACCTGTTCTATTGATGACCAGTAAGTaGGTCAGAGGATCCTGTGGTGGCTGTCCTGGTGAAAGGAAATAC | + |
|
Preference number: 5 (lower is better) Translates to: TKLSMLEPVLLMTSK*VRGSCGGCPGERKY Trigger: GTATTTCCTTTCACCAGGACAGCCACCACAGGATCCTCTGACCCACTTACTGGTCATCAATAGAACAGGTTCAAGCATCGATAACTTTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044850.4 |
||
| CDS-3UTR CAA 90 bp | TATACGCCTGACACTACATGTATGTGGAGATCAGAAAACAGCTTGAGTGATGGTGGAGCTGAGGCCACTTaGTTCATTATCTCATGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: YTPDTTCMWRSENSLSDGGAEAT*FIISWV Trigger: CACCCATGAGATAATGAACAAAGTGGCCTCAGCTCC...ACCATCACTCAAGCTGTTTTCTGATCTCCACATACATGTAGTGTCAGGCGTATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044850.4 |
||
| CDS-3UTR CAA 90 bp | ACTACATGTATGTGGAGATCAGAAAACAGCTTGAGTGATGGTTCTCTCCTTCCAGGCGGCATCTTCATATaGGAACCAATGACAGACATC | + |
|
Preference number: 5 (lower is better) Translates to: TTCMWRSENSLSDGSLLPGGIFI*EPMTDI Trigger: GATGTCTGTCATTGGTTCCAATATGAAGATGCCGCC...TGGAAGGAGAGAACCATCACTCAAGCTGTTTTCTGATCTCCACATACATGTAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044850.4 |
||
| CDS-3UTR CAA 90 bp | TATACGCCTGACACTACATGTATGTGGAGATCAGAAAACAGCTTGAGTGATGGTGAGATGTTCCAAAAGTaGGGGGACAAAGCTAATGCC | + |
|
Preference number: 5 (lower is better) Translates to: YTPDTTCMWRSENSLSDGEMFQK*GDKANA Trigger: GGCATTAGCTTTGTCCCCCAACTTTTGGAACATCTC...ACCATCACTCAAGCTGTTTTCTGATCTCCACATACATGTAGTGTCAGGCGTATA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000044850.4 |
||
| CDS TCA 90 bp | GGCTGTATTCTTCCAGGTCAAAATTCTCTTTCAATCTCTCCAATTTaGAGAAAGCCTCGGATAAAGGTCGTACGTCCTCAACAGGCAACT | + |
|
Preference number: 5 (lower is better) Translates to: GCILPGQNSLSISPI*RKPRIKVVRPQQAT Trigger: AGTTGCCTGTTGAGGACGTACGACCTTTATCCGAGGCTTTCTTCAAATTGGAGAGATTGAAAGAGAATTTTGACCTGGAAGAATACAGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044850.4 |
||
| CDS-3UTR CAA 90 bp | ACTACATGTATGTGGAGATCAGAAAACAGCTTGAGTGATGGTTCTCTCCTTCCAGGAGCTGAATGGTCTTaGTGCTCTTTTGTTTTAGGG | + |
|
Preference number: 5 (lower is better) Translates to: TTCMWRSENSLSDGSLLPGAEWS*CSFVLG Trigger: CCCTAAAACAAAAGAGCACAAAGACCATTCAGCTCC...TGGAAGGAGAGAACCATCACTCAAGCTGTTTTCTGATCTCCACATACATGTAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000044850.4 |
||
| CDS-3UTR CAA 90 bp | AGGCACAGTGATGCTCTTAAATATACTGTCTGTAAGAGGGATGTGAGCTTGAGGAACTTGTTGTACCTCTaGTTCCACTTCATGTGGCAA | + |
|
Preference number: 5 (lower is better) Translates to: RHSDALKYTVCKRDVSLRNLLYL*FHFMWQ Trigger: TTGCCACATGAAGTGGAACAAGAGGTACAACAAGTT...CCTCAAGCTCACATCCCTCTTACAGACAGTATATTTAAGAGCATCACTGTGCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044850.4 |
||
| CDS-3UTR CAA 90 bp | TCAGCAAGTCCAGCATTAATGTCTCTTTTTAACTTTAAAGGCTTAGAGCCTTTGTTTCTGAGCCAGTTCTaGCAGAGAAGCGCCCACATT | + |
|
Preference number: 5 (lower is better) Translates to: SASPALMSLFNFKGLEPLFLSQF*QRSAHI Trigger: AATGTGGGCGCTTCTCTGCAAGAACTGGCTCAGAAA...CAAAGGCTCTAAGCCTTTAAAGTTAAAAAGAGACATTAATGCTGGACTTGCTGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044850.4 |
||
| CDS-3UTR CAA 90 bp | AGGCACAGTGATGCTCTTAAATATACTGTCTGTAAGAGGGATGTGAGCTTGAGGAAAGGAAATACATACTaGGAGATAGCCCCCATGAAT | + |
|
Preference number: 5 (lower is better) Translates to: RHSDALKYTVCKRDVSLRKGNTY*EIAPMN Trigger: ATTCATGGGGGCTATCTCCAAGTATGTATTTCCTTT...CCTCAAGCTCACATCCCTCTTACAGACAGTATATTTAAGAGCATCACTGTGCCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044850.4 |
||
| CDS-3UTR CAA 90 bp | AAAACAAATACTGTGCTGTTGGGAAATCAATTGATCCTCTTCTCCCTAAAATCACTTTTGCCAGCTCCATaGTGTCCTAAGAGCCCTAGG | + |
|
Preference number: 5 (lower is better) Translates to: KTNTVLLGNQLILFSLKSLLPAP*CPKSPR Trigger: CCTAGGGCTCTTAGGACACAATGGAGCTGGCAAAAG...TGATTTTAGGGAGAAGAGGATCAATTGATTTCCCAACAGCACAGTATTTGTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000044850.4 |
||
| CDS-3UTR CAA 90 bp | ACTACATGTATGTGGAGATCAGAAAACAGCTTGAGTGATGGTTCTCTCCTTCCATTTGCTCTTCAGATGTaGGATAGAACCAATGCACCT | + |
|
Preference number: 5 (lower is better) Translates to: TTCMWRSENSLSDGSLLPFALQM*DRTNAP Trigger: AGGTGCATTGGTTCTATCCAACATCTGAAGAGCAAA...TGGAAGGAGAGAACCATCACTCAAGCTGTTTTCTGATCTCCACATACATGTAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044850.4 |
||
| CDS-3UTR CAA 90 bp | GTGCTGTTGGGAAATCAATTGATCCTCTTCTCCCTAAAATCAATATTGTTTACAAGTTGCAACTCCTCCTaGGGCAATAAAAGGCGGCAT | + |
|
Preference number: 5 (lower is better) Translates to: VLLGNQLILFSLKSILFTSCNSS*GNKRRH Trigger: ATGCCGCCTTTTATTGCCCAAGGAGGAGTTGCAACT...TGTAAACAATATTGATTTTAGGGAGAAGAGGATCAATTGATTTCCCAACAGCAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044850.4 |
||
| CDS-3UTR CAA 90 bp | TATACGCCTGACACTACATGTATGTGGAGATCAGAAAACAGCTTGAGTGATGGTTCATCGCCATTAATGTaGTCATGTACTGTCTTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: YTPDTTCMWRSENSLSDGSSPLM*SCTVFL Trigger: AAGAAAGACAGTACATGACAACATTAATGGCGATGA...ACCATCACTCAAGCTGTTTTCTGATCTCCACATACATGTAGTGTCAGGCGTATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044850.4 |
||
| CDS-3UTR CAA 90 bp | GTGCTGTTGGGAAATCAATTGATCCTCTTCTCCCTAAAATCAATATTGTTTACAAAGCCAAACTGTACGTaGGACTGTGGACAAACTCCA | + |
|
Preference number: 5 (lower is better) Translates to: VLLGNQLILFSLKSILFTKPNCT*DCGQTP Trigger: TGGAGTTTGTCCACAGTCCAACGTACAGTTTGGCTT...TGTAAACAATATTGATTTTAGGGAGAAGAGGATCAATTGATTTCCCAACAGCAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044850.4 |
||
| CDS-3UTR CAA 90 bp | ACTACATGTATGTGGAGATCAGAAAACAGCTTGAGTGATGGTTCTCTCCTTCCAATAATCCTCAATGCCTaGGTTAGAACATCTATCAAG | + |
|
Preference number: 5 (lower is better) Translates to: TTCMWRSENSLSDGSLLPIILNA*VRTSIK Trigger: CTTGATAGATGTTCTAACCAAGGCATTGAGGATTAT...TGGAAGGAGAGAACCATCACTCAAGCTGTTTTCTGATCTCCACATACATGTAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044850.4 |
||
| CDS-3UTR CAA 90 bp | AAAACAAATACTGTGCTGTTGGGAAATCAATTGATCCTCTTCTCCCTAAAATCACATTTCACTGAGGAATaGGCTTCTTCGCCAAAGTCG | + |
|
Preference number: 5 (lower is better) Translates to: KTNTVLLGNQLILFSLKSHFTEE*ASSPKS Trigger: CGACTTTGGCGAAGAAGCCAATTCCTCAGTGAAATG...TGATTTTAGGGAGAAGAGGATCAATTGATTTCCCAACAGCACAGTATTTGTTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044850.4 |
||
| CDS-3UTR CAA 90 bp | GTGCTGTTGGGAAATCAATTGATCCTCTTCTCCCTAAAATCAATATTGTTTACACTTTTCCGTTCATTCTaGAGCTTGAAGAAGCGAACC | + |
|
Preference number: 5 (lower is better) Translates to: VLLGNQLILFSLKSILFTLFRSF*SLKKRT Trigger: GGTTCGCTTCTTCAAGCTCAAGAATGAACGGAAAAG...TGTAAACAATATTGATTTTAGGGAGAAGAGGATCAATTGATTTCCCAACAGCAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044850.4 |
||
| CDS-3UTR CAA 90 bp | AAAACAAATACTGTGCTGTTGGGAAATCAATTGATCCTCTTCTCCCTAAAATCACTTGAACCTGTTCTATaGATGACCAGTAAGTGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: KTNTVLLGNQLILFSLKSLEPVL*MTSKWV Trigger: GACCCACTTACTGGTCATCAATAGAACAGGTTCAAG...TGATTTTAGGGAGAAGAGGATCAATTGATTTCCCAACAGCACAGTATTTGTTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044850.4 |
||
| CDS-3UTR CAA 90 bp | TCAGCAAGTCCAGCATTAATGTCTCTTTTTAACTTTAAAGGCTTAGAGCCTTTGTTCAATCTCTCCAATTaGAAGAAAGCCTCGGATAAA | + |
|
Preference number: 5 (lower is better) Translates to: SASPALMSLFNFKGLEPLFNLSN*KKASDK Trigger: TTTATCCGAGGCTTTCTTCAAATTGGAGAGATTGAA...CAAAGGCTCTAAGCCTTTAAAGTTAAAAAGAGACATTAATGCTGGACTTGCTGA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044850.4 |
||
| CDS-3UTR CAA 90 bp | AAAACAAATACTGTGCTGTTGGGAAATCAATTGATCCTCTTCTCCCTAAAATCAAACACTGTCCATTATTaGCATGAGAAAGAGAATGAG | + |
|
Preference number: 5 (lower is better) Translates to: KTNTVLLGNQLILFSLKSNTVHY*HEKENE Trigger: CTCATTCTCTTTCTCATGCAAATAATGGACAGTGTT...TGATTTTAGGGAGAAGAGGATCAATTGATTTCCCAACAGCACAGTATTTGTTTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044850.4 |
||
| CDS GCA 72 bp | TTGAAGAAGCGAACCTTCGCGACTGCGCAGAGCTGCTaGCTCCACAGCGCCATGCCACTCACTGAGCTTCCT | + |
|
Preference number: 6 (lower is better) Translates to: LKKRTFATAQSC*LHSAMPLTELP Trigger: AGGAAGCTCAGTGAGTGGCATGGCGCTGTGGAGGCAGCAGCTCTGCGCAGTCGCGAAGGTTCGCTTCTTCAA 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044850.4 |
||
| CDS GCA 72 bp | AGCTTGAAGAAGCGAACCTTCGCGACTGCGCAGAGCTaGTGCCTCCACAGCGCCATGCCACTCACTGAGCTT | + |
|
Preference number: 6 (lower is better) Translates to: SLKKRTFATAQS*CLHSAMPLTEL Trigger: AAGCTCAGTGAGTGGCATGGCGCTGTGGAGGCAGCAGCTCTGCGCAGTCGCGAAGGTTCGCTTCTTCAAGCT 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044850.4 |
||
| CDS GCA 72 bp | TTCATTCTTGAGCTTGAAGAAGCGAACCTTCGCGACTaGGCAGAGCTGCTGCCTCCACAGCGCCATGCCACT | + |
|
Preference number: 6 (lower is better) Translates to: FILELEEANLRD*AELLPPQRHAT Trigger: AGTGGCATGGCGCTGTGGAGGCAGCAGCTCTGCGCAGTCGCGAAGGTTCGCTTCTTCAAGCTCAAGAATGAA 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044850.4 |
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| CDS GCA 72 bp | CTCTGCCTGCTCTCCTCTCTTTCAGTAGGTTCCATATaGGATGCCTCGAGAGTGGATCCAACCCAGCAGTTG | + |
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Preference number: 6 (lower is better) Translates to: LCLLSSLSVGSI*DASRVDPTQQL Trigger: CAACTGCTGGGTTGGATCCACTCTCGAGGCATCGCATATGGAACCTACTGAAAGAGAGGAGAGCAGGCAGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044850.4 |
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| CDS CAA 72 bp | ATATGCGATGCCTCGAGAGTGGATCCAACCCAGCAGTaGGTTCATCCAGGAGCAAAACCTGGGGGTCTCCTA | + |
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Preference number: 6 (lower is better) Translates to: ICDASRVDPTQQ*VHPGAKPGGLL Trigger: TAGGAGACCCCCAGGTTTTGCTCCTGGATGAACCAACTGCTGGGTTGGATCCACTCTCGAGGCATCGCATAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044850.4 |
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| CDS CCA 72 bp | GCCCATCGCAATGTAAGGGGTGAGGCTGGCAGCCACTaGTATCCAGAAAAATGCGTTGCTCATGAATCCGTA | + |
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Preference number: 6 (lower is better) Translates to: AHRNVRGEAGSH*YPEKCVAHESV Trigger: TACGGATTCATGAGCAACGCATTTTTCTGGATACCAGTGGCTGCCAGCCTCACCCCTTACATTGCGATGGGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044850.4 |
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| CDS CAA 72 bp | TTCCAGGGGCAAGATATAGACAAGCCGTTCTTCGCTTaGCGTGGTCAGCCTGGCGTCGGAGATGTGCTTTTT | + |
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Preference number: 6 (lower is better) Translates to: FQGQDIDKPFFA*RGQPGVGDVLF Trigger: AAAAAGCACATCTCCGACGCCAGGCTGACCACGCAAAGCGAAGAACGGCTTGTCTATATCTTGCCCCTGGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044850.4 |
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| CDS TCA 72 bp | TTACAGCTCTTCCTGTGGGAGGAGCTTCCATTTCACTaGGGAATTGGCTTCTTCGCCAAAGTCGTCCAGCTC | + |
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Preference number: 6 (lower is better) Translates to: LQLFLWEELPFH*GIGFFAKVVQL Trigger: GAGCTGGACGACTTTGGCGAAGAAGCCAATTCCTCAGTGAAATGGAAGCTCCTCCCACAGGAAGAGCTGTAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044850.4 |
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| CDS CAA 72 bp | ACACTTGCTCCAGCTCAACGAGGCTTTCCATGTCTCTaGCCCCATCGCTTTGTAAGCGCCCACAAATTCCAA | + |
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Preference number: 6 (lower is better) Translates to: TLAPAQRGFPCL*PHRFVSAHKFQ Trigger: TTGGAATTTGTGGGCGCTTACAAAGCGATGGGGCAAGAGACATGGAAAGCCTCGTTGAGCTGGAGCAAGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044850.4 |
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| CDS GCA 72 bp | CTCACTGAGCTTCCTGACGAATCTAAAGACAACACTTaGTCCAGCTCAACGAGGCTTTCCATGTCTCTTGCC | + |
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Preference number: 6 (lower is better) Translates to: LTELPDESKDNT*SSSTRLSMSLA Trigger: GGCAAGAGACATGGAAAGCCTCGTTGAGCTGGAGCAAGTGTTGTCTTTAGATTCGTCAGGAAGCTCAGTGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044850.4 |
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| CDS GCA 72 bp | CATTTCTGGTCCCCAGGGCATCCAGGTCTAATGCTATaGCCTGCTGTCTTAGTGCGTGTACAAAGTTATCGA | + |
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Preference number: 6 (lower is better) Translates to: HFWSPGHPGLML*PAVLVRVQSYR Trigger: TCGATAACTTTGTACACGCACTAAGACAGCAGGGCATAGCATTAGACCTGGATGCCCTGGGGACCAGAAATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044850.4 |
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| CDS GCA 72 bp | AGGGGTGAGGCTGGCAGCCACTGGTATCCAGAAAAATaGGTTGCTCATGAATCCGTACTCATAAAGCATGTG | + |
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Preference number: 6 (lower is better) Translates to: RGEAGSHWYPEK*VAHESVLIKHV Trigger: CACATGCTTTATGAGTACGGATTCATGAGCAACGCATTTTTCTGGATACCAGTGGCTGCCAGCCTCACCCCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044850.4 |
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| CDS CAA 90 bp | AAAAGCAATAACACAGTCATCAGACTTTTCCGTTCATTCTTGAGCTaGAAGAAGCGAACCTTCGCGACTGCGCAGAGCTGCTGCCTCCAC | + |
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Preference number: 6 (lower is better) Translates to: KSNNTVIRLFRSFLS*KKRTFATAQSCCLH Trigger: GTGGAGGCAGCAGCTCTGCGCAGTCGCGAAGGTTCGCTTCTTCAAGCTCAAGAATGAACGGAAAAGTCTGATGACTGTGTTATTGCTTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044850.4 |
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| CDS CAA 90 bp | CATGCCACAATTGTTCTTCCTTTCATGAATGGAGCTGAGGCCACTTaGTTCATTATCTCATGGGTGGCTTCGGACTCAGGAGCAAACACC | + |
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Preference number: 6 (lower is better) Translates to: HATIVLPFMNGAEAT*FIISWVASDSGANT Trigger: GGTGTTTGCTCCTGAGTCCGAAGCCACCCATGAGATAATGAACAAAGTGGCCTCAGCTCCATTCATGAAAGGAAGAACAATTGTGGCATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044850.4 |
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| CDS CAA 90 bp | CTAAAGACAACACTTGCTCCAGCTCAACGAGGCTTTCCATGTCTCTaGCCCCATCGCTTTGTAAGCGCCCACAAATTCCAACATCTGATT | + |
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Preference number: 6 (lower is better) Translates to: LKTTLAPAQRGFPCL*PHRFVSAHKFQHLI Trigger: AATCAGATGTTGGAATTTGTGGGCGCTTACAAAGCGATGGGGCAAGAGACATGGAAAGCCTCGTTGAGCTGGAGCAAGTGTTGTCTTTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044850.4 |
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| CDS CAA 90 bp | ATGCCAAAAAGCAATAACACAGTCATCAGACTTTTCCGTTCATTCTaGAGCTTGAAGAAGCGAACCTTCGCGACTGCGCAGAGCTGCTGC | + |
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Preference number: 6 (lower is better) Translates to: MPKSNNTVIRLFRSF*SLKKRTFATAQSCC Trigger: GCAGCAGCTCTGCGCAGTCGCGAAGGTTCGCTTCTTCAAGCTCAAGAATGAACGGAAAAGTCTGATGACTGTGTTATTGCTTTTTGGCAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044850.4 |
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| CDS CAA 90 bp | TGTCTTAGTGCGTGTACAAAGTTATCGATGCTTGAACCTGTTCTATaGATGACCAGTAAGTGGGTCAGAGGATCCTGTGGTGGCTGTCCT | + |
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Preference number: 6 (lower is better) Translates to: CLSACTKLSMLEPVL*MTSKWVRGSCGGCP Trigger: AGGACAGCCACCACAGGATCCTCTGACCCACTTACTGGTCATCAATAGAACAGGTTCAAGCATCGATAACTTTGTACACGCACTAAGACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044850.4 |
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| CDS CCA 72 bp | ATGAATGGAGCTGAGGCCACTTTGTTCATTATCTCATaGGTGGCTTCGGACTCAGGAGCAAACACCATCATA | + |
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Preference number: 6 (lower is better) Translates to: MNGAEATLFIIS*VASDSGANTII Trigger: TATGATGGTGTTTGCTCCTGAGTCCGAAGCCACCCATGAGATAATGAACAAAGTGGCCTCAGCTCCATTCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044850.4 |
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| CDS CCA 72 bp | CCCACCGCTCCCTTTCAAAAACACCTGACCTGCGGTTaGTATTGTGTCTCCTGTTATCATGCTAATTGTTGT | + |
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Preference number: 6 (lower is better) Translates to: PTAPFQKHLTCG*YCVSCYHANCC Trigger: ACAACAATTAGCATGATAACAGGAGACACAATACCAACCGCAGGTCAGGTGTTTTTGAAAGGGAGCGGTGGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044850.4 |
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| CDS CCA 72 bp | ATGGAGCTGAGGCCACTTTGTTCATTATCTCATGGGTaGCTTCGGACTCAGGAGCAAACACCATCATATAAT | + |
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Preference number: 6 (lower is better) Translates to: MELRPLCSLSHG*LRTQEQTPSYN Trigger: ATTATATGATGGTGTTTGCTCCTGAGTCCGAAGCCACCCATGAGATAATGAACAAAGTGGCCTCAGCTCCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044850.4 |
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| CDS CAA 72 bp | ATTGTTCTTCCTTTCATGAATGGAGCTGAGGCCACTTaGTTCATTATCTCATGGGTGGCTTCGGACTCAGGA | + |
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Preference number: 6 (lower is better) Translates to: IVLPFMNGAEAT*FIISWVASDSG Trigger: TCCTGAGTCCGAAGCCACCCATGAGATAATGAACAAAGTGGCCTCAGCTCCATTCATGAAAGGAAGAACAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044850.4 |
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| CDS CAA 72 bp | GCGTGTACAAAGTTATCGATGCTTGAACCTGTTCTATaGATGACCAGTAAGTGGGTCAGAGGATCCTGTGGT | + |
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Preference number: 6 (lower is better) Translates to: ACTKLSMLEPVL*MTSKWVRGSCG Trigger: ACCACAGGATCCTCTGACCCACTTACTGGTCATCAATAGAACAGGTTCAAGCATCGATAACTTTGTACACGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044850.4 |
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| CDS CCA 72 bp | AGCATGTGTTCTTCAAAGACTGTGCTTCTGTCGGTCTaGATGCGTTCAGAAGAGTTAAATATTCCAAGCAGC | + |
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Preference number: 6 (lower is better) Translates to: SMCSSKTVLLSV*MRSEELNIPSS Trigger: GCTGCTTGGAATATTTAACTCTTCTGAACGCATCCAGACCGACAGAAGCACAGTCTTTGAAGAACACATGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044850.4 |
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| CDS CAA 72 bp | ATCTATCAAGATCCCGGTAAAGGTCTGGAAACTTGTTaGTCCTTTCCAGGGGCAAGATATAGACAAGCCGTT | + |
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Preference number: 6 (lower is better) Translates to: IYQDPGKGLETC*SFPGARYRQAV Trigger: AACGGCTTGTCTATATCTTGCCCCTGGAAAGGACAAACAAGTTTCCAGACCTTTACCGGGATCTTGATAGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044850.4 |
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| CDS CCA 72 bp | GAACCAATGACAGACATCAGCTCTTCCATCACGGAGTaGTTTGTGATCATCTCAATGATACCAGCATTAATG | + |
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Preference number: 6 (lower is better) Translates to: EPMTDISSSITE*FVIISMIPALM Trigger: CATTAATGCTGGTATCATTGAGATGATCACAAACCACTCCGTGATGGAAGAGCTGATGTCTGTCATTGGTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044850.4 |
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| CDS CCA 72 bp | AGGAACACCACCATGAAACCAGTTAAGACGACAACTTaGGCAGATTTCACAATAAGAGACATCAAAACAGCC | + |
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Preference number: 6 (lower is better) Translates to: RNTTMKPVKTTT*ADFTIRDIKTA Trigger: GGCTGTTTTGATGTCTCTTATTGTGAAATCTGCCCAAGTTGTCGTCTTAACTGGTTTCATGGTGGTGTTCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044850.4 |
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| CDS CAA 90 bp | TCGGTCTGGATGCGTTCAGAAGAGTTAAATATTCCAAGCAGCCCATaGCTAATAATATCCATGAGGACTGGGAAGCAGTTTAGTCTTTTG | + |
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Preference number: 6 (lower is better) Translates to: SVWMRSEELNIPSSP*LIISMRTGKQFSLL Trigger: CAAAAGACTAAACTGCTTCCCAGTCCTCATGGATATTATTAGCAATGGGCTGCTTGGAATATTTAACTCTTCTGAACGCATCCAGACCGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044850.4 |
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| CDS TCA 72 bp | AGGGATCCTCTGACCCCAAGAAAATTTCAAATGATATaGGAAAGTGTCCTTGAAGATGACTCTCACTGCATC | + |
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Preference number: 6 (lower is better) Translates to: RDPLTPRKFQMI*ESVLEDDSHCI Trigger: GATGCAGTGAGAGTCATCTTCAAGGACACTTTCTCATATCATTTGAAATTTTCTTGGGGTCAGAGGATCCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044850.4 |
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| CDS CAA 72 bp | ATAATATCCATGAGGACTGGGAAGCAGTTTAGTCTTTaGGCATTACACGCTACGGAAAATCTGAGAGCCTTT | + |
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Preference number: 6 (lower is better) Translates to: IISMRTGKQFSL*ALHATENLRAF Trigger: AAAGGCTCTCAGATTTTCCGTAGCGTGTAATGCCAAAAGACTAAACTGCTTCCCAGTCCTCATGGATATTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044850.4 |
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| CDS CAA 72 bp | TCTTCCAGGTCAAAATTCTCTTTCAATCTCTCCAATTaGAAGAAAGCCTCGGATAAAGGTCGTACGTCCTCA | + |
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Preference number: 6 (lower is better) Translates to: SSRSKFSFNLSN*KKASDKGRTSS Trigger: TGAGGACGTACGACCTTTATCCGAGGCTTTCTTCAAATTGGAGAGATTGAAAGAGAATTTTGACCTGGAAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044850.4 |
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| CDS TCA 72 bp | TTTCATCAGGACATGCCACAATTGTTCTTCCTTTCATaGATGGAGCTGAGGCCACTTTGTTCATTATCTCAT | + |
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Preference number: 6 (lower is better) Translates to: FHQDMPQLFFLS*MELRPLCSLSH Trigger: ATGAGATAATGAACAAAGTGGCCTCAGCTCCATTCATGAAAGGAAGAACAATTGTGGCATGTCCTGATGAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044850.4 |
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| CDS CAA 72 bp | ATGCGTTCAGAAGAGTTAAATATTCCAAGCAGCCCATaGCTAATAATATCCATGAGGACTGGGAAGCAGTTT | + |
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Preference number: 6 (lower is better) Translates to: MRSEELNIPSSP*LIISMRTGKQF Trigger: AAACTGCTTCCCAGTCCTCATGGATATTATTAGCAATGGGCTGCTTGGAATATTTAACTCTTCTGAACGCAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044850.4 |
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