Pregenerated sensors for ABCA5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000018800Ensembl transcript IDs: ENSMUST00000043961.12, ENSMUST00000124714.8, ENSMUST00000134721.2
Found 191 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCCACAGAAGGCAAACCTCCCAGAACGCTTTCCACTGCTTCCTCCTaGCCGGCCCCTCTGCTGCAGACAGCAATGCCTTCAACTCGGCAG | + |
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Preference number: 1 (lower is better) Translates to: PTEGKPPRTLSTASS*PAPLLQTAMPSTRQ Trigger: CTGCCGAGTTGAAGGCATTGCTGTCTGCAGCAGAGGGGCCGGTCAGGAGGAAGCAGTGGAAAGCGTTCTGGGAGGTTTGCCTTCTGTGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043961.12 |
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| 3UTR GCA 90 bp | CTCCCAGAACGCTTTCCACTGCTTCCTCCTGACCGGCCCCTCTGCTaGAGACAGCAATGCCTTCAACTCGGCAGAGTCTGCCTTTGTTCT | + |
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Preference number: 1 (lower is better) Translates to: LPERFPLLPPDRPLC*RQQCLQLGRVCLCS Trigger: AGAACAAAGGCAGACTCTGCCGAGTTGAAGGCATTGCTGTCTGCAGCAGAGGGGCCGGTCAGGAGGAAGCAGTGGAAAGCGTTCTGGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043961.12 |
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| 3UTR GCA 90 bp | TTTCCACTGCTTCCTCCTGACCGGCCCCTCTGCTGCAGACAGCAATaGCTTCAACTCGGCAGAGTCTGCCTTTGTTCTACTCTTACTGTT | + |
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Preference number: 1 (lower is better) Translates to: FPLLPPDRPLCCRQQ*LQLGRVCLCSTLTV Trigger: AACAGTAAGAGTAGAACAAAGGCAGACTCTGCCGAGTTGAAGGCATTGCTGTCTGCAGCAGAGGGGCCGGTCAGGAGGAAGCAGTGGAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043961.12 |
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| 3UTR CCA 90 bp | ATGCTAATAGACAGTGACCAAGTCTATATGAGAAAGAAGGCGATATaGCCTGTGTTCACCATCTCTATGAGACAGTTCTGTCTTAGGAGG | + |
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Preference number: 1 (lower is better) Translates to: MLIDSDQVYMRKKAI*PVFTISMRQFCLRR Trigger: CCTCCTAAGACAGAACTGTCTCATAGAGATGGTGAACACAGGCCATATCGCCTTCTTTCTCATATAGACTTGGTCACTGTCTATTAGCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043961.12 |
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| 3UTR GCA 90 bp | CCACTAAGAGCTTCTTTTAGACATATCAAAGGGAAAGCCAGTTTCTaGATTGCTTTGTGTCTCTCTTCTATGTTATTAGTCAGGCACTGG | + |
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Preference number: 1 (lower is better) Translates to: PLRASFRHIKGKASF*IALCLSSMLLVRHW Trigger: CCAGTGCCTGACTAATAACATAGAAGAGAGACACAAAGCAATGCAGAAACTGGCTTTCCCTTTGATATGTCTAAAAGAAGCTCTTAGTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043961.12 |
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| 3UTR TCA 90 bp | ATTATATTTTACACTGAGCACACACTGAGCAATGCTAATAGACAGTaGCCAAGTCTATATGAGAAAGAAGGCGATATGGCCTGTGTTCAC | + |
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Preference number: 1 (lower is better) Translates to: IIFYTEHTLSNANRQ*PSLYEKEGDMACVH Trigger: GTGAACACAGGCCATATCGCCTTCTTTCTCATATAGACTTGGTCACTGTCTATTAGCATTGCTCAGTGTGTGCTCAGTGTAAAATATAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043961.12 |
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| 3UTR TCA 90 bp | GACTTTCATTCCCTAGGAAAATTATATTTTACACTGAGCACACACTaGGCAATGCTAATAGACAGTGACCAAGTCTATATGAGAAAGAAG | + |
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Preference number: 1 (lower is better) Translates to: DFHSLGKLYFTLSTH*AMLIDSDQVYMRKK Trigger: CTTCTTTCTCATATAGACTTGGTCACTGTCTATTAGCATTGCTCAGTGTGTGCTCAGTGTAAAATATAATTTTCCTAGGGAATGAAAGTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043961.12 |
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| 3UTR-3UTR TCA 90 bp | CCACAGAAGGCAAACCTCCCAGAACGCTTTCCACTGCTTCCTCCTGACCGGCCCGCAAGCTACTGCCAATaGAACCTTACAAGAACTTGG | + |
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Preference number: 2 (lower is better) Translates to: PQKANLPERFPLLPPDRPASYCQ*NLTRTW Trigger: CCAAGTTCTTGTAAGGTTTCATTGGCAGTAGCTTGC...GGGCCGGTCAGGAGGAAGCAGTGGAAAGCGTTCTGGGAGGTTTGCCTTCTGTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043961.12 |
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| 3UTR-3UTR TCA 90 bp | CCACAGAAGGCAAACCTCCCAGAACGCTTTCCACTGCTTCCTCCTGACCGGCCCTATAAGGCAGGAAGGTaGCGCTGCAGTTTGTTTTCA | + |
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Preference number: 2 (lower is better) Translates to: PQKANLPERFPLLPPDRPYKAGR*RCSLFS Trigger: TGAAAACAAACTGCAGCGTCACCTTCCTGCCTTATA...GGGCCGGTCAGGAGGAAGCAGTGGAAAGCGTTCTGGGAGGTTTGCCTTCTGTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043961.12 |
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| 3UTR-3UTR GCA 90 bp | CCACAGAAGGCAAACCTCCCAGAACGCTTTCCACTGCTTCCTCCTGACCGGCCCAGCCAGTTTCTGCATTaGTTTGTGTCTCTCTTCTAT | + |
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Preference number: 2 (lower is better) Translates to: PQKANLPERFPLLPPDRPSQFLH*FVSLFY Trigger: ATAGAAGAGAGACACAAAGCAATGCAGAAACTGGCT...GGGCCGGTCAGGAGGAAGCAGTGGAAAGCGTTCTGGGAGGTTTGCCTTCTGTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043961.12 |
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| 3UTR-3UTR CCA 90 bp | CCACAGAAGGCAAACCTCCCAGAACGCTTTCCACTGCTTCCTCCTGACCGGCCCATGCCTTTAGGAAGGTaGAAAGAAACTGTCAAAGCA | + |
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Preference number: 2 (lower is better) Translates to: PQKANLPERFPLLPPDRPMPLGR*KETVKA Trigger: TGCTTTGACAGTTTCTTTCCACCTTCCTAAAGGCAT...GGGCCGGTCAGGAGGAAGCAGTGGAAAGCGTTCTGGGAGGTTTGCCTTCTGTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043961.12 |
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| 3UTR-3UTR TCA 90 bp | CCACAGAAGGCAAACCTCCCAGAACGCTTTCCACTGCTTCCTCCTGACCGGCCCTATTCTACCATGTTCTaGGGTGACCTTTTAAAGGAA | + |
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Preference number: 2 (lower is better) Translates to: PQKANLPERFPLLPPDRPYSTMF*GDLLKE Trigger: TTCCTTTAAAAGGTCACCTCAGAACATGGTAGAATA...GGGCCGGTCAGGAGGAAGCAGTGGAAAGCGTTCTGGGAGGTTTGCCTTCTGTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043961.12 |
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| 3UTR-3UTR TCA 90 bp | GAACAGCATGGAAAGCAGGGAAGAGCCCACAGAAGGCAAACCTCCCAGAACGCTACACTGAGCACACACTaGGCAATGCTAATAGACAGT | + |
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Preference number: 2 (lower is better) Translates to: EQHGKQGRAHRRQTSQNATLSTH*AMLIDS Trigger: ACTGTCTATTAGCATTGCTCAGTGTGTGCTCAGTGT...AGCGTTCTGGGAGGTTTGCCTTCTGTGGGCTCTTCCCTGCTTTCCATGCTGTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043961.12 |
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| 3UTR-3UTR GCA 90 bp | CCACAGAAGGCAAACCTCCCAGAACGCTTTCCACTGCTTCCTCCTGACCGGCCCCCTGAAACATTTAATTaGCCATATCTGCAGTCACTA | + |
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Preference number: 2 (lower is better) Translates to: PQKANLPERFPLLPPDRPPETFN*PYLQSL Trigger: TAGTGACTGCAGATATGGGCAATTAAATGTTTCAGG...GGGCCGGTCAGGAGGAAGCAGTGGAAAGCGTTCTGGGAGGTTTGCCTTCTGTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043961.12 |
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| 3UTR-3UTR TCA 90 bp | GAACAGCATGGAAAGCAGGGAAGAGCCCACAGAAGGCAAACCTCCCAGAACGCTACTTCACTGAAAGCTTaGCCATTGAAAGTTGGTAGC | + |
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Preference number: 2 (lower is better) Translates to: EQHGKQGRAHRRQTSQNATSLKA*PLKVGS Trigger: GCTACCAACTTTCAATGGTCAAGCTTTCAGTGAAGT...AGCGTTCTGGGAGGTTTGCCTTCTGTGGGCTCTTCCCTGCTTTCCATGCTGTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043961.12 |
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| 3UTR-3UTR TCA 90 bp | CCTCTGCTGCAGACAGCAATGCCTTCAACTCGGCAGAGTCTGCCTTTGTTCTACGTGACCAAGTCTATATaGGAAAGAAGGCGATATGGC | + |
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Preference number: 2 (lower is better) Translates to: PLLQTAMPSTRQSLPLFYVTKSI*ERRRYG Trigger: GCCATATCGCCTTCTTTCTCATATAGACTTGGTCAC...GTAGAACAAAGGCAGACTCTGCCGAGTTGAAGGCATTGCTGTCTGCAGCAGAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043961.12 |
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| 3UTR-3UTR GCA 90 bp | CCTCTGCTGCAGACAGCAATGCCTTCAACTCGGCAGAGTCTGCCTTTGTTCTACCAAGCCCTCTGTTCTTaGTATTGTTCTTTACGTCTC | + |
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Preference number: 2 (lower is better) Translates to: PLLQTAMPSTRQSLPLFYQALCS*YCSLRL Trigger: GAGACGTAAAGAACAATAGCAAGAACAGAGGGCTTG...GTAGAACAAAGGCAGACTCTGCCGAGTTGAAGGCATTGCTGTCTGCAGCAGAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043961.12 |
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| 3UTR-3UTR GCA 90 bp | AGAACCCTGCTTTTTCCTAAGAACAGCATGGAAAGCAGGGAAGAGCCCACAGAAAGCAATAGAGAAAGTTaGCAGCCATGTGCCACCTTG | + |
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Preference number: 2 (lower is better) Translates to: RTLLFPKNSMESREEPTESNRES*QPCATL Trigger: CAAGGTGGCACATGGCTGGCAACTTTCTCTATTGCT...TTCTGTGGGCTCTTCCCTGCTTTCCATGCTGTTCTTAGGAAAAAGCAGGGTTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043961.12 |
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| 3UTR-3UTR TCA 90 bp | CCTCTGCTGCAGACAGCAATGCCTTCAACTCGGCAGAGTCTGCCTTTGTTCTACAATTATATTTTACACTaGGCACACACTGAGCAATGC | + |
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Preference number: 2 (lower is better) Translates to: PLLQTAMPSTRQSLPLFYNYILH*AHTEQC Trigger: GCATTGCTCAGTGTGTGCTCAGTGTAAAATATAATT...GTAGAACAAAGGCAGACTCTGCCGAGTTGAAGGCATTGCTGTCTGCAGCAGAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043961.12 |
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| 3UTR-3UTR TCA 90 bp | AGAACCCTGCTTTTTCCTAAGAACAGCATGGAAAGCAGGGAAGAGCCCACAGAAGTCAGAGTCTTTCTGTaGATAACGATCACCAAACAC | + |
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Preference number: 2 (lower is better) Translates to: RTLLFPKNSMESREEPTEVRVFL*ITITKH Trigger: GTGTTTGGTGATCGTTATTCACAGAAAGACTCTGAC...TTCTGTGGGCTCTTCCCTGCTTTCCATGCTGTTCTTAGGAAAAAGCAGGGTTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043961.12 |
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| 3UTR-3UTR CCA 90 bp | CCTCTGCTGCAGACAGCAATGCCTTCAACTCGGCAGAGTCTGCCTTTGTTCTACTCCAAAATTATAATTTaGTATCAGGAGGCAAGCTAC | + |
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Preference number: 2 (lower is better) Translates to: PLLQTAMPSTRQSLPLFYSKIII*YQEASY Trigger: GTAGCTTGCCTCCTGATACCAAATTATAATTTTGGA...GTAGAACAAAGGCAGACTCTGCCGAGTTGAAGGCATTGCTGTCTGCAGCAGAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043961.12 |
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| 3UTR-3UTR CAA 90 bp | CCACAGAAGGCAAACCTCCCAGAACGCTTTCCACTGCTTCCTCCTGACCGGCCCAAACCTTACAAGAACTaGGGGGAGGGGCGTGTCATA | + |
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Preference number: 3 (lower is better) Translates to: PQKANLPERFPLLPPDRPKPYKN*GEGRVI Trigger: TATGACACGCCCCTCCCCCAAGTTCTTGTAAGGTTT...GGGCCGGTCAGGAGGAAGCAGTGGAAAGCGTTCTGGGAGGTTTGCCTTCTGTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043961.12 |
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| 3UTR GCA 72 bp | GACTGCGGCTTCCCTTTATTTCCTGTGACCAACGACTaGCACCTAGTGGACGTTACTTCTCAACGGTTCCAC | + |
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Preference number: 3 (lower is better) Translates to: DCGFPLFPVTND*HLVDVTSQRFH Trigger: GTGGAACCGTTGAGAAGTAACGTCCACTAGGTGGCAGTCGTTGGTCACAGGAAATAAAGGGAAGCCGCAGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043961.12 |
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| 3UTR-3UTR CAA 90 bp | GAACAGCATGGAAAGCAGGGAAGAGCCCACAGAAGGCAAACCTCCCAGAACGCTGCAAGCCCTCTGTTCTaGCTATTGTTCTTTACGTCT | + |
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Preference number: 3 (lower is better) Translates to: EQHGKQGRAHRRQTSQNAASPLF*LLFFTS Trigger: AGACGTAAAGAACAATAGCAAGAACAGAGGGCTTGC...AGCGTTCTGGGAGGTTTGCCTTCTGTGGGCTCTTCCCTGCTTTCCATGCTGTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043961.12 |
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| 3UTR-3UTR CAA 90 bp | GAACAGCATGGAAAGCAGGGAAGAGCCCACAGAAGGCAAACCTCCCAGAACGCTTTCTACTCTTACTGTTaGGCCACAGATGGAAAATAT | + |
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Preference number: 3 (lower is better) Translates to: EQHGKQGRAHRRQTSQNAFYSYC*ATDGKY Trigger: ATATTTTCCATCTGTGGCCAAACAGTAAGAGTAGAA...AGCGTTCTGGGAGGTTTGCCTTCTGTGGGCTCTTCCCTGCTTTCCATGCTGTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043961.12 |
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| 3UTR-3UTR CAA 90 bp | ATTTCCTGTGACCAACGACTGCCACCTAGTGGACGTTACTTCTCAACGGTTCCAAAGCCAGTTTCTGCATaGCTTTGTGTCTCTCTTCTA | + |
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Preference number: 3 (lower is better) Translates to: ISCDQRLPPSGRYFSTVPKPVSA*LCVSLL Trigger: TAGAAGAGAGACACAAAGCAATGCAGAAACTGGCTT...TGGAACCGTTGAGAAGTAACGTCCACTAGGTGGCAGTCGTTGGTCACAGGAAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043961.12 |
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| 3UTR TCA 72 bp | GTAACAAATGTGAAACGCACGATCGGAATGAGACGCTaGGTGACCAACAAAGAACCGGGAAACCAACACTCA | + |
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Preference number: 3 (lower is better) Translates to: VTNVKRTIGMRR*VTNKEPGNQHS Trigger: TGAGTGTTGGTTTCCCGGTTCTTTGTTGGTCACTCAGCGTCTCATTCCGATCGTGCGTTTCACATTTGTTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043961.12 |
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| 3UTR GCA 72 bp | AGAGATGAACTGGCCACCTCGACAAACAGCTGTCACTaGACTTTCAGAGACCTGGACTCTTACATACTAAGA | + |
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Preference number: 3 (lower is better) Translates to: RDELATSTNSCH*TFRDLDSYILR Trigger: TCTTAGTATGTAAGAGTCCAGGTCTCTGAAAGTGCAGTGACAGCTGTTTGTCGAGGTGGCCAGTTCATCTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043961.12 |
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| 3UTR CCA 72 bp | CTCGGCAGAGTCTGCCTTTGTTCTACTCTTACTGTTTaGCCACAGATGGAAAATATAAGGCAGGAAGGTGAC | + |
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Preference number: 3 (lower is better) Translates to: LGRVCLCSTLTV*PQMENIRQEGD Trigger: GTCACCTTCCTGCCTTATATTTTCCATCTGTGGCCAAACAGTAAGAGTAGAACAAAGGCAGACTCTGCCGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043961.12 |
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| 3UTR TCA 72 bp | ATTATAATTTGGTATCAGGAGGCAAGCTACTGCCAATaGAACCTTACAAGAACTTGGGGGAGGGGCGTGTCA | + |
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Preference number: 3 (lower is better) Translates to: IIIWYQEASYCQ*NLTRTWGRGVS Trigger: TGACACGCCCCTCCCCCAAGTTCTTGTAAGGTTTCATTGGCAGTAGCTTGCCTCCTGATACCAAATTATAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043961.12 |
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| 3UTR GCA 72 bp | GAAACATTTAATTGCCCATATCTGCAGTCACTAGACTaGGGCTTCCCTTTATTTCCTGTGACCAACGACTGC | + |
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Preference number: 3 (lower is better) Translates to: ETFNCPYLQSLD*GFPLFPVTNDC Trigger: GCAGTCGTTGGTCACAGGAAATAAAGGGAAGCCGCAGTCTAGTGACTGCAGATATGGGCAATTAAATGTTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043961.12 |
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| 3UTR TCA 72 bp | TACACTGAGCACACACTGAGCAATGCTAATAGACAGTaGCCAAGTCTATATGAGAAAGAAGGCGATATGGCC | + |
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Preference number: 3 (lower is better) Translates to: YTEHTLSNANRQ*PSLYEKEGDMA Trigger: GGCCATATCGCCTTCTTTCTCATATAGACTTGGTCACTGTCTATTAGCATTGCTCAGTGTGTGCTCAGTGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043961.12 |
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| 3UTR CCA 72 bp | GACAGTGACCAAGTCTATATGAGAAAGAAGGCGATATaGCCTGTGTTCACCATCTCTATGAGACAGTTCTGT | + |
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Preference number: 3 (lower is better) Translates to: DSDQVYMRKKAI*PVFTISMRQFC Trigger: ACAGAACTGTCTCATAGAGATGGTGAACACAGGCCATATCGCCTTCTTTCTCATATAGACTTGGTCACTGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043961.12 |
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| 3UTR TCA 72 bp | TGTTTGGCCACAGATGGAAAATATAAGGCAGGAAGGTaGCGCTGCAGTTTGTTTTCATTTGTTGCTAACAAA | + |
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Preference number: 3 (lower is better) Translates to: CLATDGKYKAGR*RCSLFSFVANK Trigger: TTTGTTAGCAACAAATGAAAACAAACTGCAGCGTCACCTTCCTGCCTTATATTTTCCATCTGTGGCCAAACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043961.12 |
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| 3UTR TCA 72 bp | CAAGCCCTCTGTTCTTGCTATTGTTCTTTACGTCTCTaGTGCAAAAGTCACACCACAATATATGTTTTTACA | + |
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Preference number: 3 (lower is better) Translates to: QALCSCYCSLRL*CKSHTTIYVFT Trigger: TGTAAAAACATATATTGTGGTGTGACTTTTGCATCAGAGACGTAAAGAACAATAGCAAGAACAGAGGGCTTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043961.12 |
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| 3UTR TCA 72 bp | TCCCTAGGAAAATTATATTTTACACTGAGCACACACTaGGCAATGCTAATAGACAGTGACCAAGTCTATATG | + |
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Preference number: 3 (lower is better) Translates to: SLGKLYFTLSTH*AMLIDSDQVYM Trigger: CATATAGACTTGGTCACTGTCTATTAGCATTGCTCAGTGTGTGCTCAGTGTAAAATATAATTTTCCTAGGGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043961.12 |
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| 3UTR GCA 72 bp | GCTTCTTTTAGACATATCAAAGGGAAAGCCAGTTTCTaGATTGCTTTGTGTCTCTCTTCTATGTTATTAGTC | + |
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Preference number: 3 (lower is better) Translates to: ASFRHIKGKASF*IALCLSSMLLV Trigger: GACTAATAACATAGAAGAGAGACACAAAGCAATGCAGAAACTGGCTTTCCCTTTGATATGTCTAAAAGAAGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043961.12 |
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| CDS-3UTR TCA 90 bp | CCACAGAAGGCAAACCTCCCAGAACGCTTTCCACTGCTTCCTCCTGACCGGCCCCAGCGGCCTCTCCCATaGTCACAGCTTTGGTCGACT | + |
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Preference number: 4 (lower is better) Translates to: PQKANLPERFPLLPPDRPQRPLP*SQLWST Trigger: AGTCGACCAAAGCTGTGATCATGGGAGAGGCCGCTG...GGGCCGGTCAGGAGGAAGCAGTGGAAAGCGTTCTGGGAGGTTTGCCTTCTGTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043961.12 |
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| CDS-3UTR GCA 90 bp | CCACAGAAGGCAAACCTCCCAGAACGCTTTCCACTGCTTCCTCCTGACCGGCCCGGCAGCATCTATCGATaGCTGCAGAACTGTAAACCC | + |
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Preference number: 4 (lower is better) Translates to: PQKANLPERFPLLPPDRPGSIYR*LQNCKP Trigger: GGGTTTACAGTTCTGCAGGCATCGATAGATGCTGCC...GGGCCGGTCAGGAGGAAGCAGTGGAAAGCGTTCTGGGAGGTTTGCCTTCTGTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043961.12 |
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| CDS-3UTR GCA 90 bp | CCACAGAAGGCAAACCTCCCAGAACGCTTTCCACTGCTTCCTCCTGACCGGCCCATCGTAGACACTTGCTaGTTCCAGAGGCTCATGGTG | + |
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Preference number: 4 (lower is better) Translates to: PQKANLPERFPLLPPDRPIVDTC*FQRLMV Trigger: CACCATGAGCCTCTGGAAGCAGCAAGTGTCTACGAT...GGGCCGGTCAGGAGGAAGCAGTGGAAAGCGTTCTGGGAGGTTTGCCTTCTGTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043961.12 |
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| CDS-3UTR TCA 90 bp | CCACAGAAGGCAAACCTCCCAGAACGCTTTCCACTGCTTCCTCCTGACCGGCCCGCATTCCTTGTGATATaGCAGCTTTCCTGTCGGCAA | + |
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Preference number: 4 (lower is better) Translates to: PQKANLPERFPLLPPDRPAFLVI*QLSCRQ Trigger: TTGCCGACAGGAAAGCTGTCATATCACAAGGAATGC...GGGCCGGTCAGGAGGAAGCAGTGGAAAGCGTTCTGGGAGGTTTGCCTTCTGTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043961.12 |
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| CDS-3UTR TCA 90 bp | ATTTCCTGTGACCAACGACTGCCACCTAGTGGACGTTACTTCTCAACGGTTCCATCCAGCAGCGTCACCTaGGGGTTCCCCAGCATGCTG | + |
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Preference number: 4 (lower is better) Translates to: ISCDQRLPPSGRYFSTVPSSSVT*GFPSML Trigger: CAGCATGCTGGGGAACCCTCAGGTGACGCTGCTGGA...TGGAACCGTTGAGAAGTAACGTCCACTAGGTGGCAGTCGTTGGTCACAGGAAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043961.12 |
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| CDS-3UTR TCA 90 bp | GAACAGCATGGAAAGCAGGGAAGAGCCCACAGAAGGCAAACCTCCCAGAACGCTGCTGCCCAGATACCATaGTGGCCACTCTGTCACAGA | + |
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Preference number: 4 (lower is better) Translates to: EQHGKQGRAHRRQTSQNAAAQIP*WPLCHR Trigger: TCTGTGACAGAGTGGCCATCATGGTATCTGGGCAGC...AGCGTTCTGGGAGGTTTGCCTTCTGTGGGCTCTTCCCTGCTTTCCATGCTGTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043961.12 |
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| CDS-3UTR GCA 90 bp | GAACAGCATGGAAAGCAGGGAAGAGCCCACAGAAGGCAAACCTCCCAGAACGCTGCTCTCCACATGTGCTaGTTGGCTCTTGGGTCCATG | + |
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Preference number: 4 (lower is better) Translates to: EQHGKQGRAHRRQTSQNAALHMC*LALGSM Trigger: CATGGACCCAAGAGCCAAGCAGCACATGTGGAGAGC...AGCGTTCTGGGAGGTTTGCCTTCTGTGGGCTCTTCCCTGCTTTCCATGCTGTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043961.12 |
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| CDS-3UTR TCA 90 bp | CCACAGAAGGCAAACCTCCCAGAACGCTTTCCACTGCTTCCTCCTGACCGGCCCACAATGCTGCTACTCTaGGGGAATAACGAAGAAGCT | + |
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Preference number: 4 (lower is better) Translates to: PQKANLPERFPLLPPDRPTMLLL*GNNEEA Trigger: AGCTTCTTCGTTATTCCCTCAGAGTAGCAGCATTGT...GGGCCGGTCAGGAGGAAGCAGTGGAAAGCGTTCTGGGAGGTTTGCCTTCTGTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043961.12 |
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| CDS-3UTR TCA 90 bp | CCACAGAAGGCAAACCTCCCAGAACGCTTTCCACTGCTTCCTCCTGACCGGCCCAGTCTGGAACGAGTTTaGTGGGAACCACAGCATTTT | + |
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Preference number: 4 (lower is better) Translates to: PQKANLPERFPLLPPDRPSLERV*WEPQHF Trigger: AAAATGCTGTGGTTCCCATCAAACTCGTTCCAGACT...GGGCCGGTCAGGAGGAAGCAGTGGAAAGCGTTCTGGGAGGTTTGCCTTCTGTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043961.12 |
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| CDS-3UTR TCA 90 bp | CCACAGAAGGCAAACCTCCCAGAACGCTTTCCACTGCTTCCTCCTGACCGGCCCCATCTTCATCCTCATTaGTGGGTGGTTCTGGAAACT | + |
|
Preference number: 4 (lower is better) Translates to: PQKANLPERFPLLPPDRPHLHPH*WVVLET Trigger: AGTTTCCAGAACCACCCATCAATGAGGATGAAGATG...GGGCCGGTCAGGAGGAAGCAGTGGAAAGCGTTCTGGGAGGTTTGCCTTCTGTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043961.12 |
||
| CDS-3UTR GCA 90 bp | CCACAGAAGGCAAACCTCCCAGAACGCTTTCCACTGCTTCCTCCTGACCGGCCCGGACTTAGAAAGACTTaGGGCTACCAGTTCTTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: PQKANLPERFPLLPPDRPGLRKT*GYQFFL Trigger: GAGAAAGAACTGGTAGCCGCAAGTCTTTCTAAGTCC...GGGCCGGTCAGGAGGAAGCAGTGGAAAGCGTTCTGGGAGGTTTGCCTTCTGTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043961.12 |
||
| CDS-3UTR TCA 90 bp | CCTCTGCTGCAGACAGCAATGCCTTCAACTCGGCAGAGTCTGCCTTTGTTCTACAACCAGCGACGACAGTaGCTCTGTGGCACAGTATCT | + |
|
Preference number: 4 (lower is better) Translates to: PLLQTAMPSTRQSLPLFYNQRRQ*LCGTVS Trigger: AGATACTGTGCCACAGAGTCACTGTCGTCGCTGGTT...GTAGAACAAAGGCAGACTCTGCCGAGTTGAAGGCATTGCTGTCTGCAGCAGAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043961.12 |
||
| CDS-3UTR TCA 90 bp | GAACAGCATGGAAAGCAGGGAAGAGCCCACAGAAGGCAAACCTCCCAGAACGCTTCCAACCCAATAGGCTaGTGGCAAAAGACCCGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: EQHGKQGRAHRRQTSQNASNPIG*WQKTRK Trigger: CTTTCGGGTCTTTTGCCATCAGCCTATTGGGTTGGA...AGCGTTCTGGGAGGTTTGCCTTCTGTGGGCTCTTCCCTGCTTTCCATGCTGTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043961.12 |
||
| CDS-3UTR GCA 90 bp | CCACAGAAGGCAAACCTCCCAGAACGCTTTCCACTGCTTCCTCCTGACCGGCCCGCTCTCTTGGCGGCTTaGATTTGGGAAAATATATTG | + |
|
Preference number: 4 (lower is better) Translates to: PQKANLPERFPLLPPDRPALLAA*IWENIL Trigger: CAATATATTTTCCCAAATGCAAGCCGCCAAGAGAGC...GGGCCGGTCAGGAGGAAGCAGTGGAAAGCGTTCTGGGAGGTTTGCCTTCTGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043961.12 |
||
| CDS-3UTR CCA 90 bp | GAACAGCATGGAAAGCAGGGAAGAGCCCACAGAAGGCAAACCTCCCAGAACGCTTTTCCTGTTCCACTGTaGCCCAGCAGTGCAGTAATC | + |
|
Preference number: 4 (lower is better) Translates to: EQHGKQGRAHRRQTSQNAFPVPL*PSSAVI Trigger: GATTACTGCACTGCTGGGCCACAGTGGAACAGGAAA...AGCGTTCTGGGAGGTTTGCCTTCTGTGGGCTCTTCCCTGCTTTCCATGCTGTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043961.12 |
||
| CDS-3UTR CCA 90 bp | CCACAGAAGGCAAACCTCCCAGAACGCTTTCCACTGCTTCCTCCTGACCGGCCCACGACAGTGACTCTGTaGCACAGTATCTGTCTATAT | + |
|
Preference number: 4 (lower is better) Translates to: PQKANLPERFPLLPPDRPTTVTL*HSICLY Trigger: ATATAGACAGATACTGTGCCACAGAGTCACTGTCGT...GGGCCGGTCAGGAGGAAGCAGTGGAAAGCGTTCTGGGAGGTTTGCCTTCTGTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043961.12 |
||
| CDS-3UTR GCA 90 bp | CCTCTGCTGCAGACAGCAATGCCTTCAACTCGGCAGAGTCTGCCTTTGTTCTACTCCAGAGGCTCATGGTaGTCACTGAAGAAGCTTTCG | + |
|
Preference number: 4 (lower is better) Translates to: PLLQTAMPSTRQSLPLFYSRGSW*SLKKLS Trigger: CGAAAGCTTCTTCAGTGAGCACCATGAGCCTCTGGA...GTAGAACAAAGGCAGACTCTGCCGAGTTGAAGGCATTGCTGTCTGCAGCAGAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043961.12 |
||
| CDS-3UTR GCA 90 bp | ATTTCCTGTGACCAACGACTGCCACCTAGTGGACGTTACTTCTCAACGGTTCCATTTCCCACCAGAGAGTaGTGGCCAAAGTCCCACAGC | + |
|
Preference number: 4 (lower is better) Translates to: ISCDQRLPPSGRYFSTVPFPTRE*WPKSHS Trigger: GCTGTGGGACTTTGGCCAGCACTCTCTGGTGGGAAA...TGGAACCGTTGAGAAGTAACGTCCACTAGGTGGCAGTCGTTGGTCACAGGAAAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043961.12 |
||
| CDS-3UTR CCA 90 bp | CCTCTGCTGCAGACAGCAATGCCTTCAACTCGGCAGAGTCTGCCTTTGTTCTACGCTTCCAGAGGCTCATaGTGCTCACTGAAGAAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: PLLQTAMPSTRQSLPLFYASRGS*CSLKKL Trigger: AAGCTTCTTCAGTGAGCACCATGAGCCTCTGGAAGC...GTAGAACAAAGGCAGACTCTGCCGAGTTGAAGGCATTGCTGTCTGCAGCAGAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043961.12 |
||
| CDS-3UTR TCA 90 bp | CCTCTGCTGCAGACAGCAATGCCTTCAACTCGGCAGAGTCTGCCTTTGTTCTACCCCAAAGACCAGTACTaGGCAGCATCACATGTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: PLLQTAMPSTRQSLPLFYPKDQY*AASHVF Trigger: AAAGACATGTGATGCTGCTCAGTACTGGTCTTTGGG...GTAGAACAAAGGCAGACTCTGCCGAGTTGAAGGCATTGCTGTCTGCAGCAGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043961.12 |
||
| CDS-3UTR TCA 90 bp | CCTCTGCTGCAGACAGCAATGCCTTCAACTCGGCAGAGTCTGCCTTTGTTCTACATCAGAAAGGCACACTaGCACAAAGGACTGAAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: PLLQTAMPSTRQSLPLFYIRKAH*HKGLKS Trigger: GCTCTTCAGTCCTTTGTGTCAGTGTGCCTTTCTGAT...GTAGAACAAAGGCAGACTCTGCCGAGTTGAAGGCATTGCTGTCTGCAGCAGAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043961.12 |
||
| CDS-3UTR TCA 90 bp | ATTTCCTGTGACCAACGACTGCCACCTAGTGGACGTTACTTCTCAACGGTTCCAGGTTCCCCAGCATGCTaGGAGCAAAACACAGCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: ISCDQRLPPSGRYFSTVPGSPAC*EQNTAF Trigger: GAAAGCTGTGTTTTGCTCTCAGCATGCTGGGGAACC...TGGAACCGTTGAGAAGTAACGTCCACTAGGTGGCAGTCGTTGGTCACAGGAAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043961.12 |
||
| CDS-3UTR GCA 90 bp | CCACAGAAGGCAAACCTCCCAGAACGCTTTCCACTGCTTCCTCCTGACCGGCCCAGATTGGAATGGCTATaGAGAAGGTGTAATGAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: PQKANLPERFPLLPPDRPRLEWL*RRCNER Trigger: TCTTTCATTACACCTTCTGCATAGCCATTCCAATCT...GGGCCGGTCAGGAGGAAGCAGTGGAAAGCGTTCTGGGAGGTTTGCCTTCTGTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043961.12 |
||
| CDS-3UTR GCA 90 bp | ATTTCCTGTGACCAACGACTGCCACCTAGTGGACGTTACTTCTCAACGGTTCCAATAGCTCTCCACATGTaGTGCTTGGCTCTTGGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: ISCDQRLPPSGRYFSTVPIALHM*CLALGS Trigger: GGACCCAAGAGCCAAGCAGCACATGTGGAGAGCTAT...TGGAACCGTTGAGAAGTAACGTCCACTAGGTGGCAGTCGTTGGTCACAGGAAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043961.12 |
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| CDS-3UTR GCA 90 bp | CCTCTGCTGCAGACAGCAATGCCTTCAACTCGGCAGAGTCTGCCTTTGTTCTACCCAATACATCTTAGCTaGCCAGATACCATGATGGCC | + |
|
Preference number: 4 (lower is better) Translates to: PLLQTAMPSTRQSLPLFYPIHLS*PDTMMA Trigger: GGCCATCATGGTATCTGGGCAGCTAAGATGTATTGG...GTAGAACAAAGGCAGACTCTGCCGAGTTGAAGGCATTGCTGTCTGCAGCAGAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043961.12 |
||
| CDS-3UTR CCA 90 bp | ATTTCCTGTGACCAACGACTGCCACCTAGTGGACGTTACTTCTCAACGGTTCCATCCCCTGGAATGACTTaGTCGAGATACACAGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: ISCDQRLPPSGRYFSTVPSPGMT*SRYTAR Trigger: CCTGGCTGTGTATCTCGACCAAGTCATTCCAGGGGA...TGGAACCGTTGAGAAGTAACGTCCACTAGGTGGCAGTCGTTGGTCACAGGAAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043961.12 |
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| CDS-3UTR CCA 90 bp | GAACAGCATGGAAAGCAGGGAAGAGCCCACAGAAGGCAAACCTCCCAGAACGCTAGATTCCAAACAATATaGCGAGAGCAGGGGTCCATT | + |
|
Preference number: 4 (lower is better) Translates to: EQHGKQGRAHRRQTSQNARFQTI*REQGSI Trigger: AATGGACCCCTGCTCTCGCCATATTGTTTGGAATCT...AGCGTTCTGGGAGGTTTGCCTTCTGTGGGCTCTTCCCTGCTTTCCATGCTGTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043961.12 |
||
| CDS-3UTR CCA 90 bp | CCTCTGCTGCAGACAGCAATGCCTTCAACTCGGCAGAGTCTGCCTTTGTTCTACTTTGCCAGCTCCATTTaGACCCAACAGTCCCAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: PLLQTAMPSTRQSLPLFYFASSI*TQQSQD Trigger: ATCTTGGGACTGTTGGGTCCAAATGGAGCTGGCAAA...GTAGAACAAAGGCAGACTCTGCCGAGTTGAAGGCATTGCTGTCTGCAGCAGAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043961.12 |
||
| CDS-3UTR CCA 90 bp | AGAACCCTGCTTTTTCCTAAGAACAGCATGGAAAGCAGGGAAGAGCCCACAGAATCCACATGTGCTGCTTaGCTCTTGGGTCCATGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: RTLLFPKNSMESREEPTESTCAA*LLGPCL Trigger: CAGGCATGGACCCAAGAGCCAAGCAGCACATGTGGA...TTCTGTGGGCTCTTCCCTGCTTTCCATGCTGTTCTTAGGAAAAAGCAGGGTTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043961.12 |
||
| CDS-3UTR TCA 90 bp | CCTCTGCTGCAGACAGCAATGCCTTCAACTCGGCAGAGTCTGCCTTTGTTCTACATTTGTCCATGTCTTTaGAAGGCAGGCTGTACACGA | + |
|
Preference number: 4 (lower is better) Translates to: PLLQTAMPSTRQSLPLFYICPCL*KAGCTR Trigger: TCGTGTACAGCCTGCCTTTCAAAGACATGGACAAAT...GTAGAACAAAGGCAGACTCTGCCGAGTTGAAGGCATTGCTGTCTGCAGCAGAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043961.12 |
||
| CDS-3UTR GCA 90 bp | GAACAGCATGGAAAGCAGGGAAGAGCCCACAGAAGGCAAACCTCCCAGAACGCTCTTCTTTTCTTTTTCTaGCACGATGTGGATTGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: EQHGKQGRAHRRQTSQNALLFFF*HDVDCQ Trigger: CTGGCAATCCACATCGTGGCAGAAAAAGAAAAGAAG...AGCGTTCTGGGAGGTTTGCCTTCTGTGGGCTCTTCCCTGCTTTCCATGCTGTTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043961.12 |
||
| CDS-3UTR GCA 90 bp | GAACAGCATGGAAAGCAGGGAAGAGCCCACAGAAGGCAAACCTCCCAGAACGCTGAAAGATCACAATGCTaGTACTCTGAGGGAATAACG | + |
|
Preference number: 4 (lower is better) Translates to: EQHGKQGRAHRRQTSQNAERSQC*YSEGIT Trigger: CGTTATTCCCTCAGAGTAGCAGCATTGTGATCTTTC...AGCGTTCTGGGAGGTTTGCCTTCTGTGGGCTCTTCCCTGCTTTCCATGCTGTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043961.12 |
||
| CDS-3UTR GCA 90 bp | CCACAGAAGGCAAACCTCCCAGAACGCTTTCCACTGCTTCCTCCTGACCGGCCCAAATACACTATAGTCTaGTTGGTCAATTTCTGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: PQKANLPERFPLLPPDRPKYTIV*LVNFCF Trigger: GAAGCAGAAATTGACCAAGCAGACTATAGTGTATTT...GGGCCGGTCAGGAGGAAGCAGTGGAAAGCGTTCTGGGAGGTTTGCCTTCTGTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043961.12 |
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| CDS-3UTR GCA 90 bp | CCTCTGCTGCAGACAGCAATGCCTTCAACTCGGCAGAGTCTGCCTTTGTTCTACCAGCGCGCACTGATTTaGTTTCTCGTTTCAATGAGA | + |
|
Preference number: 4 (lower is better) Translates to: PLLQTAMPSTRQSLPLFYQRALI*FLVSMR Trigger: TCTCATTGAAACGAGAAAGCAAATCAGTGCGCGCTG...GTAGAACAAAGGCAGACTCTGCCGAGTTGAAGGCATTGCTGTCTGCAGCAGAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043961.12 |
||
| CDS-3UTR GCA 90 bp | GAACAGCATGGAAAGCAGGGAAGAGCCCACAGAAGGCAAACCTCCCAGAACGCTTGCCACACAAGCCAATaGGGTCACAGAATAGATAAA | + |
|
Preference number: 4 (lower is better) Translates to: EQHGKQGRAHRRQTSQNACHTSQ*GHRIDK Trigger: TTTATCTATTCTGTGACCGCATTGGCTTGTGTGGCA...AGCGTTCTGGGAGGTTTGCCTTCTGTGGGCTCTTCCCTGCTTTCCATGCTGTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043961.12 |
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| CDS-3UTR CCA 90 bp | GAACAGCATGGAAAGCAGGGAAGAGCCCACAGAAGGCAAACCTCCCAGAACGCTTCTCTGCATTTTCCATaGCAAAGTAAGGTGGCATTG | + |
|
Preference number: 4 (lower is better) Translates to: EQHGKQGRAHRRQTSQNASLHFP*QSKVAL Trigger: CAATGCCACCTTACTTTGCCATGGAAAATGCAGAGA...AGCGTTCTGGGAGGTTTGCCTTCTGTGGGCTCTTCCCTGCTTTCCATGCTGTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043961.12 |
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| CDS-3UTR TCA 90 bp | ATTTCCTGTGACCAACGACTGCCACCTAGTGGACGTTACTTCTCAACGGTTCCATGGGGAAACTTTCTATaGGGACAATCAGCAGGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: ISCDQRLPPSGRYFSTVPWGNFL*GQSAGQ Trigger: TTGGCCTGCTGATTGTCCTCATAGAAAGTTTCCCCA...TGGAACCGTTGAGAAGTAACGTCCACTAGGTGGCAGTCGTTGGTCACAGGAAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043961.12 |
||
| CDS-3UTR TCA 90 bp | AGAACCCTGCTTTTTCCTAAGAACAGCATGGAAAGCAGGGAAGAGCCCACAGAAAATGTTCCTGTAGAGTaGGATCTGGCCACAGTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: RTLLFPKNSMESREEPTENVPVE*DLATVG Trigger: ACCCACTGTGGCCAGATCTCACTCTACAGGAACATT...TTCTGTGGGCTCTTCCCTGCTTTCCATGCTGTTCTTAGGAAAAAGCAGGGTTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043961.12 |
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| CDS-3UTR GCA 90 bp | CCTCTGCTGCAGACAGCAATGCCTTCAACTCGGCAGAGTCTGCCTTTGTTCTACAAGGAAAATCAAGCTTaGGTACAGAAGAACCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: PLLQTAMPSTRQSLPLFYKENQA*VQKNPG Trigger: TCCTGGGTTCTTCTGTACGCAAGCTTGATTTTCCTT...GTAGAACAAAGGCAGACTCTGCCGAGTTGAAGGCATTGCTGTCTGCAGCAGAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043961.12 |
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| CDS-3UTR GCA 90 bp | AGAACCCTGCTTTTTCCTAAGAACAGCATGGAAAGCAGGGAAGAGCCCACAGAAACTACTCTATCCTCCTaGGTCCTTTCCCACCAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: RTLLFPKNSMESREEPTETTLSS*VLSHQR Trigger: TCTCTGGTGGGAAAGGACGCAGGAGGATAGAGTAGT...TTCTGTGGGCTCTTCCCTGCTTTCCATGCTGTTCTTAGGAAAAAGCAGGGTTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043961.12 |
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| CDS-3UTR CCA 90 bp | AGAACCCTGCTTTTTCCTAAGAACAGCATGGAAAGCAGGGAAGAGCCCACAGAAGGGGTACTCCAGGTCTaGATGGCTTCAGTCACATTT | + |
|
Preference number: 4 (lower is better) Translates to: RTLLFPKNSMESREEPTEGVLQV*MASVTF Trigger: AAATGTGACTGAAGCCATCCAGACCTGGAGTACCCC...TTCTGTGGGCTCTTCCCTGCTTTCCATGCTGTTCTTAGGAAAAAGCAGGGTTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043961.12 |
||
| CDS-3UTR CCA 90 bp | GAACAGCATGGAAAGCAGGGAAGAGCCCACAGAAGGCAAACCTCCCAGAACGCTCATGGCAAAGTAAGGTaGCATTGCAGTAACAATGAT | + |
|
Preference number: 4 (lower is better) Translates to: EQHGKQGRAHRRQTSQNAHGKVR*HCSNND Trigger: ATCATTGTTACTGCAATGCCACCTTACTTTGCCATG...AGCGTTCTGGGAGGTTTGCCTTCTGTGGGCTCTTCCCTGCTTTCCATGCTGTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043961.12 |
||
| CDS-3UTR TCA 90 bp | ATTTCCTGTGACCAACGACTGCCACCTAGTGGACGTTACTTCTCAACGGTTCCAAGGACATGGTGTCTTTaGAAACCACACCTACGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: ISCDQRLPPSGRYFSTVPRTWCL*KPHLRS Trigger: ACTTCGTAGGTGTGGTTTTCAAAGACACCATGTCCT...TGGAACCGTTGAGAAGTAACGTCCACTAGGTGGCAGTCGTTGGTCACAGGAAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043961.12 |
||
| CDS-3UTR TCA 90 bp | GAACAGCATGGAAAGCAGGGAAGAGCCCACAGAAGGCAAACCTCCCAGAACGCTTGGCTGGTATTCCTTTaGTTGAAGCCAAAATTGATA | + |
|
Preference number: 4 (lower is better) Translates to: EQHGKQGRAHRRQTSQNAWLVFL*LKPKLI Trigger: TATCAATTTTGGCTTCAATCAAAGGAATACCAGCCA...AGCGTTCTGGGAGGTTTGCCTTCTGTGGGCTCTTCCCTGCTTTCCATGCTGTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043961.12 |
||
| CDS-3UTR TCA 90 bp | GAACAGCATGGAAAGCAGGGAAGAGCCCACAGAAGGCAAACCTCCCAGAACGCTACTTTCTGCACTTCTTaGATTATATTGTTGGCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: EQHGKQGRAHRRQTSQNATFCTS*IILLAG Trigger: ACCAGCCAACAATATAATTCAAGAAGTGCAGAAAGT...AGCGTTCTGGGAGGTTTGCCTTCTGTGGGCTCTTCCCTGCTTTCCATGCTGTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043961.12 |
||
| CDS-3UTR TCA 90 bp | ATTTCCTGTGACCAACGACTGCCACCTAGTGGACGTTACTTCTCAACGGTTCCAGACAGCTTCCTTTTCTaGCCACCGCTTAACTTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: ISCDQRLPPSGRYFSTVPDSFLF*PPLNFF Trigger: GAAAAAGTTAAGCGGTGGTCAGAAAAGGAAGCTGTC...TGGAACCGTTGAGAAGTAACGTCCACTAGGTGGCAGTCGTTGGTCACAGGAAAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043961.12 |
||
| CDS-3UTR TCA 90 bp | AGAACCCTGCTTTTTCCTAAGAACAGCATGGAAAGCAGGGAAGAGCCCACAGAAGCTCATGGTGCTCACTaGAGAAGCTTTCGTTTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: RTLLFPKNSMESREEPTEAHGAH*RSFRFR Trigger: TCTGAAACGAAAGCTTCTTCAGTGAGCACCATGAGC...TTCTGTGGGCTCTTCCCTGCTTTCCATGCTGTTCTTAGGAAAAAGCAGGGTTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043961.12 |
||
| CDS-3UTR TCA 90 bp | CCTCTGCTGCAGACAGCAATGCCTTCAACTCGGCAGAGTCTGCCTTTGTTCTACTTTGTGAAAGGGCCCTaGAAAATGGATCCTTTCTTA | + |
|
Preference number: 4 (lower is better) Translates to: PLLQTAMPSTRQSLPLFYFVKGP*KMDPFL Trigger: TAAGAAAGGATCCATTTTTCAGGGCCCTTTCACAAA...GTAGAACAAAGGCAGACTCTGCCGAGTTGAAGGCATTGCTGTCTGCAGCAGAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043961.12 |
||
| CDS-3UTR GCA 90 bp | CCTCTGCTGCAGACAGCAATGCCTTCAACTCGGCAGAGTCTGCCTTTGTTCTACCTGACTGCGGACATATaGCAATCATTTTTCTTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: PLLQTAMPSTRQSLPLFYLTADI*QSFFLL Trigger: AAGCAAGAAAAATGATTGGCATATGTCCGCAGTCAG...GTAGAACAAAGGCAGACTCTGCCGAGTTGAAGGCATTGCTGTCTGCAGCAGAGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043961.12 |
||
| CDS-3UTR CCA 90 bp | CCTCTGCTGCAGACAGCAATGCCTTCAACTCGGCAGAGTCTGCCTTTGTTCTACTACTCCAGGTCTGGATaGCTTCAGTCACATTTAAAT | + |
|
Preference number: 4 (lower is better) Translates to: PLLQTAMPSTRQSLPLFYYSRSG*LQSHLN Trigger: ATTTAAATGTGACTGAAGCCATCCAGACCTGGAGTA...GTAGAACAAAGGCAGACTCTGCCGAGTTGAAGGCATTGCTGTCTGCAGCAGAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043961.12 |
||
| CDS-3UTR CCA 90 bp | CCTCTGCTGCAGACAGCAATGCCTTCAACTCGGCAGAGTCTGCCTTTGTTCTACGAAACTTCTTATTTTTaGCCTTTTGTGAAAGGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: PLLQTAMPSTRQSLPLFYETSYF*PFVKGP Trigger: GGGCCCTTTCACAAAAGGCCAAAAATAAGAAGTTTC...GTAGAACAAAGGCAGACTCTGCCGAGTTGAAGGCATTGCTGTCTGCAGCAGAGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043961.12 |
||
| CDS-3UTR CCA 90 bp | GAACAGCATGGAAAGCAGGGAAGAGCCCACAGAAGGCAAACCTCCCAGAACGCTATTGATGGGTGGTTCTaGAAACTTCTTATTTTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: EQHGKQGRAHRRQTSQNAIDGWF*KLLIFG Trigger: GCCAAAAATAAGAAGTTTCCAGAACCACCCATCAAT...AGCGTTCTGGGAGGTTTGCCTTCTGTGGGCTCTTCCCTGCTTTCCATGCTGTTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043961.12 |
||
| CDS-3UTR CCA 90 bp | AGAACCCTGCTTTTTCCTAAGAACAGCATGGAAAGCAGGGAAGAGCCCACAGAAGCATACCATAATGGCTaGCTTCTCCTCACAACACTG | + |
|
Preference number: 4 (lower is better) Translates to: RTLLFPKNSMESREEPTEAYHNG*LLLTTL Trigger: CAGTGTTGTGAGGAGAAGCCAGCCATTATGGTATGC...TTCTGTGGGCTCTTCCCTGCTTTCCATGCTGTTCTTAGGAAAAAGCAGGGTTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043961.12 |
||
| CDS-3UTR TCA 90 bp | ATTTCCTGTGACCAACGACTGCCACCTAGTGGACGTTACTTCTCAACGGTTCCATCGCTTGATTATCTTTaGTGGCTTGCATGTCCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: ISCDQRLPPSGRYFSTVPSLDYL*WLACPD Trigger: ATCTGGACATGCAAGCCATCAAAGATAATCAAGCGA...TGGAACCGTTGAGAAGTAACGTCCACTAGGTGGCAGTCGTTGGTCACAGGAAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043961.12 |
||
| CDS-3UTR TCA 90 bp | AGAACCCTGCTTTTTCCTAAGAACAGCATGGAAAGCAGGGAAGAGCCCACAGAACTTCAGCATTCCTTGTaGTATGACAGCTTTCCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: RTLLFPKNSMESREEPTELQHSL*YDSFPV Trigger: GACAGGAAAGCTGTCATATCACAAGGAATGCTGAAG...TTCTGTGGGCTCTTCCCTGCTTTCCATGCTGTTCTTAGGAAAAAGCAGGGTTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043961.12 |
||
| CDS-3UTR TCA 90 bp | CCTCTGCTGCAGACAGCAATGCCTTCAACTCGGCAGAGTCTGCCTTTGTTCTACAGCAGAAAACAAGCCTaGAAATTTGTCCATGTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: PLLQTAMPSTRQSLPLFYSRKQA*KFVHVF Trigger: AAAGACATGGACAAATTTTCAGGCTTGTTTTCTGCT...GTAGAACAAAGGCAGACTCTGCCGAGTTGAAGGCATTGCTGTCTGCAGCAGAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043961.12 |
||
| CDS-3UTR TCA 90 bp | ATTTCCTGTGACCAACGACTGCCACCTAGTGGACGTTACTTCTCAACGGTTCCAGAGTCAGTAGAATTTTaGAGCAGCAGGCTTGTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: ISCDQRLPPSGRYFSTVPESVEF*SSRLVL Trigger: CAAAACAAGCCTGCTGCTTCAAAATTCTACTGACTC...TGGAACCGTTGAGAAGTAACGTCCACTAGGTGGCAGTCGTTGGTCACAGGAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043961.12 |
||
| CDS-3UTR TCA 90 bp | AGAACCCTGCTTTTTCCTAAGAACAGCATGGAAAGCAGGGAAGAGCCCACAGAAACTGCAGGTAGGGCATaGTTACAGCAACTAAAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: RTLLFPKNSMESREEPTETAGRA*LQQLKV Trigger: GACTTTTAGTTGCTGTAATCATGCCCTACCTGCAGT...TTCTGTGGGCTCTTCCCTGCTTTCCATGCTGTTCTTAGGAAAAAGCAGGGTTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043961.12 |
||
| CDS-3UTR GCA 90 bp | GAACAGCATGGAAAGCAGGGAAGAGCCCACAGAAGGCAAACCTCCCAGAACGCTTTAAAATCTTCTAAATaGATGACCTGTGCAATCCCA | + |
|
Preference number: 4 (lower is better) Translates to: EQHGKQGRAHRRQTSQNALKSSK*MTCAIP Trigger: TGGGATTGCACAGGTCATGCATTTAGAAGATTTTAA...AGCGTTCTGGGAGGTTTGCCTTCTGTGGGCTCTTCCCTGCTTTCCATGCTGTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043961.12 |
||
| CDS-3UTR GCA 90 bp | CCTCTGCTGCAGACAGCAATGCCTTCAACTCGGCAGAGTCTGCCTTTGTTCTACACTGTCATTAAACATTaGCACCATTATGTTCTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: PLLQTAMPSTRQSLPLFYTVIKH*HHYVLV Trigger: CACCAGAACATAATGGTGGCAATGTTTAATGACAGT...GTAGAACAAAGGCAGACTCTGCCGAGTTGAAGGCATTGCTGTCTGCAGCAGAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043961.12 |
||
| CDS-3UTR GCA 90 bp | AGAACCCTGCTTTTTCCTAAGAACAGCATGGAAAGCAGGGAAGAGCCCACAGAACTCCTAGAAAGATCTTaGCTGAAGTTGGCTCAACGT | + |
|
Preference number: 4 (lower is better) Translates to: RTLLFPKNSMESREEPTELLERS*LKLAQR Trigger: ACGTTGAGCCAACTTCAGGCAAGATCTTTCTAGGAG...TTCTGTGGGCTCTTCCCTGCTTTCCATGCTGTTCTTAGGAAAAAGCAGGGTTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043961.12 |
||
| CDS-3UTR CCA 90 bp | AGAACCCTGCTTTTTCCTAAGAACAGCATGGAAAGCAGGGAAGAGCCCACAGAATCAGTAGAAGTGTTCTaGTCTGTCTCCAAACTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: RTLLFPKNSMESREEPTESVEVF*SVSKLP Trigger: TGGGAGTTTGGAGACAGACCAGAACACTTCTACTGA...TTCTGTGGGCTCTTCCCTGCTTTCCATGCTGTTCTTAGGAAAAAGCAGGGTTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043961.12 |
||
| CDS-3UTR CCA 90 bp | AGAACCCTGCTTTTTCCTAAGAACAGCATGGAAAGCAGGGAAGAGCCCACAGAACAAGCCAAATTCCCCTaGAATGACTTGGTCGAGATA | + |
|
Preference number: 4 (lower is better) Translates to: RTLLFPKNSMESREEPTEQAKFP*NDLVEI Trigger: TATCTCGACCAAGTCATTCCAGGGGAATTTGGCTTG...TTCTGTGGGCTCTTCCCTGCTTTCCATGCTGTTCTTAGGAAAAAGCAGGGTTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043961.12 |
||
| CDS-3UTR CCA 90 bp | ATTTCCTGTGACCAACGACTGCCACCTAGTGGACGTTACTTCTCAACGGTTCCAGAGGGTAGATTGGAATaGCTATGCAGAAGGTGTAAT | + |
|
Preference number: 4 (lower is better) Translates to: ISCDQRLPPSGRYFSTVPEGRLE*LCRRCN Trigger: ATTACACCTTCTGCATAGCCATTCCAATCTACCCTC...TGGAACCGTTGAGAAGTAACGTCCACTAGGTGGCAGTCGTTGGTCACAGGAAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043961.12 |
||
| CDS-3UTR CCA 90 bp | CCTCTGCTGCAGACAGCAATGCCTTCAACTCGGCAGAGTCTGCCTTTGTTCTACAAGGGCCCTGAAAAATaGATCCTTTCTTATAGATCT | + |
|
Preference number: 4 (lower is better) Translates to: PLLQTAMPSTRQSLPLFYKGPEK*ILSYRS Trigger: AGATCTATAAGAAAGGATCCATTTTTCAGGGCCCTT...GTAGAACAAAGGCAGACTCTGCCGAGTTGAAGGCATTGCTGTCTGCAGCAGAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043961.12 |
||
| CDS-3UTR TCA 90 bp | AGAACCCTGCTTTTTCCTAAGAACAGCATGGAAAGCAGGGAAGAGCCCACAGAATGTTCCAGGGTTGCTTaGGAAAAGCTGTATTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: RTLLFPKNSMESREEPTECSRVA*EKLYSS Trigger: TGAAGAATACAGCTTTTCTCAAGCAACCCTGGAACA...TTCTGTGGGCTCTTCCCTGCTTTCCATGCTGTTCTTAGGAAAAAGCAGGGTTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043961.12 |
||
| CDS-3UTR GCA 90 bp | AGAACCCTGCTTTTTCCTAAGAACAGCATGGAAAGCAGGGAAGAGCCCACAGAATTATCTTTGATGGCTTaGATGTCCAGATCCAGCAAC | + |
|
Preference number: 4 (lower is better) Translates to: RTLLFPKNSMESREEPTELSLMA*MSRSSN Trigger: GTTGCTGGATCTGGACATGCAAGCCATCAAAGATAA...TTCTGTGGGCTCTTCCCTGCTTTCCATGCTGTTCTTAGGAAAAAGCAGGGTTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043961.12 |
||
| CDS-3UTR GCA 90 bp | ATTTCCTGTGACCAACGACTGCCACCTAGTGGACGTTACTTCTCAACGGTTCCACTTCAATGGCAAAAGTaGGTTTTGCTTCTTCCAACT | + |
|
Preference number: 4 (lower is better) Translates to: ISCDQRLPPSGRYFSTVPLQWQK*VLLLPT Trigger: AGTTGGAAGAAGCAAAACGCACTTTTGCCATTGAAG...TGGAACCGTTGAGAAGTAACGTCCACTAGGTGGCAGTCGTTGGTCACAGGAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043961.12 |
||
| CDS-3UTR TCA 90 bp | ATTTCCTGTGACCAACGACTGCCACCTAGTGGACGTTACTTCTCAACGGTTCCATTTCCCTATAAATTCTaGAGAAACGGGCTCAACAAT | + |
|
Preference number: 4 (lower is better) Translates to: ISCDQRLPPSGRYFSTVPFPYKF*RNGLNN Trigger: ATTGTTGAGCCCGTTTCTTCAGAATTTATAGGGAAA...TGGAACCGTTGAGAAGTAACGTCCACTAGGTGGCAGTCGTTGGTCACAGGAAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043961.12 |
||
| CDS-3UTR TCA 90 bp | ATTTCCTGTGACCAACGACTGCCACCTAGTGGACGTTACTTCTCAACGGTTCCATTCAATGAGAGGAAATaGAACTTTGCAATCGTAGAC | + |
|
Preference number: 4 (lower is better) Translates to: ISCDQRLPPSGRYFSTVPFNERK*NFAIVD Trigger: GTCTACGATTGCAAAGTTTCATTTCCTCTCATTGAA...TGGAACCGTTGAGAAGTAACGTCCACTAGGTGGCAGTCGTTGGTCACAGGAAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043961.12 |
||
| CDS-3UTR TCA 90 bp | AGAACCCTGCTTTTTCCTAAGAACAGCATGGAAAGCAGGGAAGAGCCCACAGAAGCTTTCTCGTTTCAATaGGAGGAAATGAAACTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: RTLLFPKNSMESREEPTEAFSFQ*EEMKLC Trigger: GCAAAGTTTCATTTCCTCTCATTGAAACGAGAAAGC...TTCTGTGGGCTCTTCCCTGCTTTCCATGCTGTTCTTAGGAAAAAGCAGGGTTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043961.12 |
||
| CDS-3UTR TCA 90 bp | AGAACCCTGCTTTTTCCTAAGAACAGCATGGAAAGCAGGGAAGAGCCCACAGAATCCAAGAACCCTTTATaGAAGAAATCAGACAACCCA | + |
|
Preference number: 4 (lower is better) Translates to: RTLLFPKNSMESREEPTESKNPL*KKSDNP Trigger: TGGGTTGTCTGATTTCTTTCATAAAGGGTTCTTGGA...TTCTGTGGGCTCTTCCCTGCTTTCCATGCTGTTCTTAGGAAAAAGCAGGGTTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043961.12 |
||
| CDS-3UTR GCA 90 bp | AGAACCCTGCTTTTTCCTAAGAACAGCATGGAAAGCAGGGAAGAGCCCACAGAAGCCGTAACTGCATATTaGAGAAAGAAAGTTGTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: RTLLFPKNSMESREEPTEAVTAY*RKKVVS Trigger: GGAAACAACTTTCTTTCTGCAATATGCAGTTACGGC...TTCTGTGGGCTCTTCCCTGCTTTCCATGCTGTTCTTAGGAAAAAGCAGGGTTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043961.12 |
||
| CDS-3UTR GCA 90 bp | ATTTCCTGTGACCAACGACTGCCACCTAGTGGACGTTACTTCTCAACGGTTCCAAAAGACAGCCGTAACTaGATATTGCAGAAAGAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: ISCDQRLPPSGRYFSTVPKDSRN*ILQKES Trigger: ACTTTCTTTCTGCAATATGCAGTTACGGCTGTCTTT...TGGAACCGTTGAGAAGTAACGTCCACTAGGTGGCAGTCGTTGGTCACAGGAAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043961.12 |
||
| CDS-3UTR GCA 90 bp | ATTTCCTGTGACCAACGACTGCCACCTAGTGGACGTTACTTCTCAACGGTTCCAAAGTTTATATCTGACTaGGGACATATGCCAATCATT | + |
|
Preference number: 4 (lower is better) Translates to: ISCDQRLPPSGRYFSTVPKFISD*GHMPII Trigger: AATGATTGGCATATGTCCGCAGTCAGATATAAACTT...TGGAACCGTTGAGAAGTAACGTCCACTAGGTGGCAGTCGTTGGTCACAGGAAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043961.12 |
||
| CDS-3UTR GCA 90 bp | ATTTCCTGTGACCAACGACTGCCACCTAGTGGACGTTACTTCTCAACGGTTCCAGATCTTATGATTCTCTaGATTTTCCATGGCAAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: ISCDQRLPPSGRYFSTVPDLMIL*IFHGKV Trigger: TACTTTGCCATGGAAAATGCAGAGAATCATAAGATC...TGGAACCGTTGAGAAGTAACGTCCACTAGGTGGCAGTCGTTGGTCACAGGAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043961.12 |
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| CDS-3UTR CCA 90 bp | AGAACCCTGCTTTTTCCTAAGAACAGCATGGAAAGCAGGGAAGAGCCCACAGAAAGCTGTATTCTTCAATaGCAAAAGTGCGTTTTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: RTLLFPKNSMESREEPTESCILQ*QKCVLL Trigger: AAGCAAAACGCACTTTTGCCATTGAAGAATACAGCT...TTCTGTGGGCTCTTCCCTGCTTTCCATGCTGTTCTTAGGAAAAAGCAGGGTTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000043961.12 |
||
| CDS TCA 90 bp | CCCCTCGCGGGAAGGTGTCAATCTCCACAACAGCGGCCTCTCCCATaGTCACAGCTTTGGTCGACTCCAGCTCGCTCCACACAGAAACAT | + |
|
Preference number: 5 (lower is better) Translates to: PLAGRCQSPQQRPLP*SQLWSTPARSTQKH Trigger: ATGTTTCTGTGTGGAGCGAGCTGGAGTCGACCAAAGCTGTGATCATGGGAGAGGCCGCTGTTGTGGAGATTGACACCTTCCCGCGAGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043961.12 ENSMUST00000124714.8 |
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| CDS GCA 90 bp | ATGTCTTTGAAAGGCAGGCTGTACACGAGCTGCTGGTCATTCTGCTaGAGTAGCGCGGCTGCGGGTATGTGCTGCCTAACCAGCGACGAC | + |
|
Preference number: 5 (lower is better) Translates to: MSLKGRLYTSCWSFC*SSAAAGMCCLTSDD Trigger: GTCGTCGCTGGTTAGGCAGCACATACCCGCAGCCGCGCTACTGCAGCAGAATGACCAGCAGCTCGTGTACAGCCTGCCTTTCAAAGACAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043961.12 ENSMUST00000124714.8 |
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| CDS-3UTR CAA 90 bp | GAACAGCATGGAAAGCAGGGAAGAGCCCACAGAAGGCAAACCTCCCAGAACGCTTGTGCTGCTTGGCTCTaGGGTCCATGCCTGTGGACG | + |
|
Preference number: 5 (lower is better) Translates to: EQHGKQGRAHRRQTSQNACAAWL*GPCLWT Trigger: CGTCCACAGGCATGGACCCAAGAGCCAAGCAGCACA...AGCGTTCTGGGAGGTTTGCCTTCTGTGGGCTCTTCCCTGCTTTCCATGCTGTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043961.12 |
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| CDS GCA 90 bp | CCTGAAAATTTGTCCATGTCTTTGAAAGGCAGGCTGTACACGAGCTaGTGGTCATTCTGCTGCAGTAGCGCGGCTGCGGGTATGTGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: PENLSMSLKGRLYTS*WSFCCSSAAAGMCC Trigger: GCAGCACATACCCGCAGCCGCGCTACTGCAGCAGAATGACCAGCAGCTCGTGTACAGCCTGCCTTTCAAAGACATGGACAAATTTTCAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043961.12 ENSMUST00000124714.8 |
||
| CDS-3UTR CAA 90 bp | CCACAGAAGGCAAACCTCCCAGAACGCTTTCCACTGCTTCCTCCTGACCGGCCCAAGTCTGGAACGAGTTaGATGGGAACCACAGCATTT | + |
|
Preference number: 5 (lower is better) Translates to: PQKANLPERFPLLPPDRPKSGTS*MGTTAF Trigger: AAATGCTGTGGTTCCCATCAAACTCGTTCCAGACTT...GGGCCGGTCAGGAGGAAGCAGTGGAAAGCGTTCTGGGAGGTTTGCCTTCTGTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043961.12 |
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| CDS CCA 90 bp | GAAAATTTGTCCATGTCTTTGAAAGGCAGGCTGTACACGAGCTGCTaGTCATTCTGCTGCAGTAGCGCGGCTGCGGGTATGTGCTGCCTA | + |
|
Preference number: 5 (lower is better) Translates to: ENLSMSLKGRLYTSC*SFCCSSAAAGMCCL Trigger: TAGGCAGCACATACCCGCAGCCGCGCTACTGCAGCAGAATGACCAGCAGCTCGTGTACAGCCTGCCTTTCAAAGACATGGACAAATTTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043961.12 ENSMUST00000124714.8 |
||
| CDS-3UTR CAA 90 bp | ATTTCCTGTGACCAACGACTGCCACCTAGTGGACGTTACTTCTCAACGGTTCCACCCATGATCACAGCTTaGGTCGACTCCAGCTCGCTC | + |
|
Preference number: 5 (lower is better) Translates to: ISCDQRLPPSGRYFSTVPPMITA*VDSSSL Trigger: GAGCGAGCTGGAGTCGACCAAAGCTGTGATCATGGG...TGGAACCGTTGAGAAGTAACGTCCACTAGGTGGCAGTCGTTGGTCACAGGAAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043961.12 |
||
| CDS-3UTR CAA 90 bp | ATTTCCTGTGACCAACGACTGCCACCTAGTGGACGTTACTTCTCAACGGTTCCACTGCCACGATGTGGATaGCCAGGAAGTAGCCGAAGG | + |
|
Preference number: 5 (lower is better) Translates to: ISCDQRLPPSGRYFSTVPLPRCG*PGSSRR Trigger: CCTTCGGCTACTTCCTGGCAATCCACATCGTGGCAG...TGGAACCGTTGAGAAGTAACGTCCACTAGGTGGCAGTCGTTGGTCACAGGAAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043961.12 |
||
| CDS-3UTR CAA 90 bp | CCACAGAAGGCAAACCTCCCAGAACGCTTTCCACTGCTTCCTCCTGACCGGCCCAAACCTGTTCCAGGGTaGCTTGAGAAAAGCTGTATT | + |
|
Preference number: 5 (lower is better) Translates to: PQKANLPERFPLLPPDRPKPVPG*LEKSCI Trigger: AATACAGCTTTTCTCAAGCAACCCTGGAACAGGTTT...GGGCCGGTCAGGAGGAAGCAGTGGAAAGCGTTCTGGGAGGTTTGCCTTCTGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043961.12 |
||
| CDS-3UTR CAA 90 bp | GAACAGCATGGAAAGCAGGGAAGAGCCCACAGAAGGCAAACCTCCCAGAACGCTACAGCGCGCACTGATTaGCTTTCTCGTTTCAATGAG | + |
|
Preference number: 5 (lower is better) Translates to: EQHGKQGRAHRRQTSQNATARTD*LSRFNE Trigger: CTCATTGAAACGAGAAAGCAAATCAGTGCGCGCTGT...AGCGTTCTGGGAGGTTTGCCTTCTGTGGGCTCTTCCCTGCTTTCCATGCTGTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043961.12 |
||
| CDS-3UTR CAA 90 bp | CCACAGAAGGCAAACCTCCCAGAACGCTTTCCACTGCTTCCTCCTGACCGGCCCAGCCGTAACTGCATATaGCAGAAAGAAAGTTGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: PQKANLPERFPLLPPDRPSRNCI*QKESCF Trigger: GAAACAACTTTCTTTCTGCAATATGCAGTTACGGCT...GGGCCGGTCAGGAGGAAGCAGTGGAAAGCGTTCTGGGAGGTTTGCCTTCTGTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043961.12 |
||
| CDS-3UTR CAA 90 bp | CCACAGAAGGCAAACCTCCCAGAACGCTTTCCACTGCTTCCTCCTGACCGGCCCATTCGTCATCTTCACTaGAATGTGAACCATAATCTC | + |
|
Preference number: 5 (lower is better) Translates to: PQKANLPERFPLLPPDRPIRHLH*NVNHNL Trigger: GAGATTATGGTTCACATTCAAGTGAAGATGACGAAT...GGGCCGGTCAGGAGGAAGCAGTGGAAAGCGTTCTGGGAGGTTTGCCTTCTGTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043961.12 |
||
| CDS-3UTR CAA 90 bp | AGAACCCTGCTTTTTCCTAAGAACAGCATGGAAAGCAGGGAAGAGCCCACAGAATTCCCCTGGAATGACTaGGTCGAGATACACAGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: RTLLFPKNSMESREEPTEFPWND*VEIHSQ Trigger: CTGGCTGTGTATCTCGACCAAGTCATTCCAGGGGAA...TTCTGTGGGCTCTTCCCTGCTTTCCATGCTGTTCTTAGGAAAAAGCAGGGTTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043961.12 |
||
| CDS-3UTR CAA 90 bp | CCTCTGCTGCAGACAGCAATGCCTTCAACTCGGCAGAGTCTGCCTTTGTTCTACCTGTTCCAGGGTTGCTaGAGAAAAGCTGTATTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: PLLQTAMPSTRQSLPLFYLFQGC*RKAVFF Trigger: GAAGAATACAGCTTTTCTCAAGCAACCCTGGAACAG...GTAGAACAAAGGCAGACTCTGCCGAGTTGAAGGCATTGCTGTCTGCAGCAGAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043961.12 |
||
| CDS-3UTR CAA 90 bp | AGAACCCTGCTTTTTCCTAAGAACAGCATGGAAAGCAGGGAAGAGCCCACAGAATTTTGCCAGCTCCATTaGGACCCAACAGTCCCAAGA | + |
|
Preference number: 5 (lower is better) Translates to: RTLLFPKNSMESREEPTEFCQLH*DPTVPR Trigger: TCTTGGGACTGTTGGGTCCAAATGGAGCTGGCAAAA...TTCTGTGGGCTCTTCCCTGCTTTCCATGCTGTTCTTAGGAAAAAGCAGGGTTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043961.12 |
||
| CDS-3UTR CAA 90 bp | ATTTCCTGTGACCAACGACTGCCACCTAGTGGACGTTACTTCTCAACGGTTCCAAGGGCGGCCCGCTTTTaGTTTTTAAATGCAGTTCGA | + |
|
Preference number: 5 (lower is better) Translates to: ISCDQRLPPSGRYFSTVPRAARF*FLNAVR Trigger: TCGAACTGCATTTAAAAACAAAAAGCGGGCCGCCCT...TGGAACCGTTGAGAAGTAACGTCCACTAGGTGGCAGTCGTTGGTCACAGGAAAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043961.12 |
||
| CDS-3UTR CAA 90 bp | CCTCTGCTGCAGACAGCAATGCCTTCAACTCGGCAGAGTCTGCCTTTGTTCTACAGCTCTCTTGGCGGCTaGCATTTGGGAAAATATATT | + |
|
Preference number: 5 (lower is better) Translates to: PLLQTAMPSTRQSLPLFYSSLGG*HLGKYI Trigger: AATATATTTTCCCAAATGCAAGCCGCCAAGAGAGCT...GTAGAACAAAGGCAGACTCTGCCGAGTTGAAGGCATTGCTGTCTGCAGCAGAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043961.12 |
||
| CDS CCA 90 bp | GTCACTCTGTTAGCCTTTCTATACTTTAGAAGATTCCAAACAATATaGCGAGAGCAGGGGTCCATTCCTGCTGTAGGCTCGTCTAGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: VTLLAFLYFRRFQTI*REQGSIPAVGSSSR Trigger: CCTGCTAGACGAGCCTACAGCAGGAATGGACCCCTGCTCTCGCCATATTGTTTGGAATCTTCTAAAGTATAGAAAGGCTAACAGAGTGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043961.12 ENSMUST00000124714.8 |
||
| CDS-3UTR CAA 90 bp | ATTTCCTGTGACCAACGACTGCCACCTAGTGGACGTTACTTCTCAACGGTTCCAACCACACCTACGAAGTaGCTGGACTTAGAAAGACTT | + |
|
Preference number: 5 (lower is better) Translates to: ISCDQRLPPSGRYFSTVPTTPTK*LDLERL Trigger: AAGTCTTTCTAAGTCCAGCAACTTCGTAGGTGTGGT...TGGAACCGTTGAGAAGTAACGTCCACTAGGTGGCAGTCGTTGGTCACAGGAAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043961.12 |
||
| CDS-3UTR CAA 90 bp | ATTTCCTGTGACCAACGACTGCCACCTAGTGGACGTTACTTCTCAACGGTTCCACTCCACACAGAAACATaGGTCTTCAGCTGTATAATG | + |
|
Preference number: 5 (lower is better) Translates to: ISCDQRLPPSGRYFSTVPLHTET*VFSCIM Trigger: CATTATACAGCTGAAGACCAATGTTTCTGTGTGGAG...TGGAACCGTTGAGAAGTAACGTCCACTAGGTGGCAGTCGTTGGTCACAGGAAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043961.12 |
||
| CDS-3UTR CAA 90 bp | CCTCTGCTGCAGACAGCAATGCCTTCAACTCGGCAGAGTCTGCCTTTGTTCTACCCACAGCAAGAAATTTaGCAGGATAAAAATACAGTC | + |
|
Preference number: 5 (lower is better) Translates to: PLLQTAMPSTRQSLPLFYPQQEI*QDKNTV Trigger: GACTGTATTTTTATCCTGCAAAATTTCTTGCTGTGG...GTAGAACAAAGGCAGACTCTGCCGAGTTGAAGGCATTGCTGTCTGCAGCAGAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043961.12 |
||
| CDS-3UTR CAA 90 bp | AGAACCCTGCTTTTTCCTAAGAACAGCATGGAAAGCAGGGAAGAGCCCACAGAATCATCTTCATCCTCATaGATGGGTGGTTCTGGAAAC | + |
|
Preference number: 5 (lower is better) Translates to: RTLLFPKNSMESREEPTESSSSS*MGGSGN Trigger: GTTTCCAGAACCACCCATCAATGAGGATGAAGATGA...TTCTGTGGGCTCTTCCCTGCTTTCCATGCTGTTCTTAGGAAAAAGCAGGGTTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043961.12 |
||
| CDS-3UTR CAA 90 bp | CCTCTGCTGCAGACAGCAATGCCTTCAACTCGGCAGAGTCTGCCTTTGTTCTACGTTATCTTCTTCCTCTaGCTCTTTAGTAAGTTCTAC | + |
|
Preference number: 5 (lower is better) Translates to: PLLQTAMPSTRQSLPLFYVIFFL*LFSKFY Trigger: GTAGAACTTACTAAAGAGCAAGAGGAAGAAGATAAC...GTAGAACAAAGGCAGACTCTGCCGAGTTGAAGGCATTGCTGTCTGCAGCAGAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043961.12 |
||
| CDS TCA 90 bp | GAATGTCTAGAGCAGAAAACAAGCCTGAAAATTTGTCCATGTCTTTaGAAGGCAGGCTGTACACGAGCTGCTGGTCATTCTGCTGCAGTA | + |
|
Preference number: 5 (lower is better) Translates to: ECLEQKTSLKICPCL*KAGCTRAAGHSAAV Trigger: TACTGCAGCAGAATGACCAGCAGCTCGTGTACAGCCTGCCTTTCAAAGACATGGACAAATTTTCAGGCTTGTTTTCTGCTCTAGACATTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043961.12 ENSMUST00000124714.8 |
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| CDS-3UTR CAA 90 bp | ATTTCCTGTGACCAACGACTGCCACCTAGTGGACGTTACTTCTCAACGGTTCCATATCCAAGAATAACGTaGGAAAGGCTGAATTTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: ISCDQRLPPSGRYFSTVPYPRIT*ERLNLS Trigger: GGACAAATTCAGCCTTTCCAACGTTATTCTTGGATA...TGGAACCGTTGAGAAGTAACGTCCACTAGGTGGCAGTCGTTGGTCACAGGAAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043961.12 |
||
| CDS-3UTR CAA 90 bp | ATTTCCTGTGACCAACGACTGCCACCTAGTGGACGTTACTTCTCAACGGTTCCACACTTTCTGCACTTCTaGAATTATATTGTTGGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: ISCDQRLPPSGRYFSTVPHFLHF*NYIVGW Trigger: CCAGCCAACAATATAATTCAAGAAGTGCAGAAAGTG...TGGAACCGTTGAGAAGTAACGTCCACTAGGTGGCAGTCGTTGGTCACAGGAAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043961.12 |
||
| CDS-3UTR CAA 90 bp | ATTTCCTGTGACCAACGACTGCCACCTAGTGGACGTTACTTCTCAACGGTTCCAAACAAGCCTGAAAATTaGTCCATGTCTTTGAAAGGC | + |
|
Preference number: 5 (lower is better) Translates to: ISCDQRLPPSGRYFSTVPNKPEN*SMSLKG Trigger: GCCTTTCAAAGACATGGACAAATTTTCAGGCTTGTT...TGGAACCGTTGAGAAGTAACGTCCACTAGGTGGCAGTCGTTGGTCACAGGAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043961.12 |
||
| CDS-3UTR CAA 90 bp | ATTTCCTGTGACCAACGACTGCCACCTAGTGGACGTTACTTCTCAACGGTTCCATACACTATAGTCTGCTaGGTCAATTTCTGCTTCAAC | + |
|
Preference number: 5 (lower is better) Translates to: ISCDQRLPPSGRYFSTVPYTIVC*VNFCFN Trigger: GTTGAAGCAGAAATTGACCAAGCAGACTATAGTGTA...TGGAACCGTTGAGAAGTAACGTCCACTAGGTGGCAGTCGTTGGTCACAGGAAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043961.12 |
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| CDS-3UTR CAA 90 bp | AGAACCCTGCTTTTTCCTAAGAACAGCATGGAAAGCAGGGAAGAGCCCACAGAAGGAAACTTCTTATTTTaGGCCTTTTGTGAAAGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: RTLLFPKNSMESREEPTEGNFLF*AFCERA Trigger: GGCCCTTTCACAAAAGGCCAAAAATAAGAAGTTTCC...TTCTGTGGGCTCTTCCCTGCTTTCCATGCTGTTCTTAGGAAAAAGCAGGGTTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000043961.12 |
||
| CDS TCA 90 bp | GCATCTATCGATGCCTGCAGAACTGTAAACCCCAAAGACCAGTACTaGGCAGCATCACATGTCTTTGAACAGCCTTCTCTTGAATTCATA | + |
|
Preference number: 5 (lower is better) Translates to: ASIDACRTVNPKDQY*AASHVFEQPSLEFI Trigger: TATGAATTCAAGAGAAGGCTGTTCAAAGACATGTGATGCTGCTCAGTACTGGTCTTTGGGGTTTACAGTTCTGCAGGCATCGATAGATGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000043961.12 ENSMUST00000124714.8 ENSMUST00000134721.2 |
||
| CDS-3UTR CAA 90 bp | ATTTCCTGTGACCAACGACTGCCACCTAGTGGACGTTACTTCTCAACGGTTCCACTTGGCGGCTTGCATTaGGGAAAATATATTGAATTT | + |
|
Preference number: 5 (lower is better) Translates to: ISCDQRLPPSGRYFSTVPLGGLH*GKYIEF Trigger: AAATTCAATATATTTTCCCAAATGCAAGCCGCCAAG...TGGAACCGTTGAGAAGTAACGTCCACTAGGTGGCAGTCGTTGGTCACAGGAAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043961.12 |
||
| CDS TCA 90 bp | GCTTCCTTTTCTGACCACCGCTTAACTTTTTCGCTTGATTATCTTTaGTGGCTTGCATGTCCAGATCCAGCAACACTTTCTGCACTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: ASFSDHRLTFSLDYL*WLACPDPATLSALL Trigger: AAGAAGTGCAGAAAGTGTTGCTGGATCTGGACATGCAAGCCATCAAAGATAATCAAGCGAAAAAGTTAAGCGGTGGTCAGAAAAGGAAGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000043961.12 ENSMUST00000124714.8 |
||
| CDS GCA 90 bp | GATTGGAATGGCTATGCAGAAGGTGTAATGAAAGACAGCCGTAACTaGATATTGCAGAAAGAAAGTTGTTTCCGTGATTGCCACACAAGC | + |
|
Preference number: 5 (lower is better) Translates to: DWNGYAEGVMKDSRN*ILQKESCFRDCHTS Trigger: GCTTGTGTGGCAATCACGGAAACAACTTTCTTTCTGCAATATGCAGTTACGGCTGTCTTTCATTACACCTTCTGCATAGCCATTCCAATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043961.12 ENSMUST00000124714.8 |
||
| CDS TCA 90 bp | CACAGCTTTCGCTTGATCCCTGCAGGTAGCTTCTTTACAGTCTTCTaGAGATGTTCTTTCAAATCAAGGGCTTTTGTTATTCGACTGATG | + |
|
Preference number: 5 (lower is better) Translates to: HSFRLIPAGSFFTVF*RCSFKSRAFVIRLM Trigger: CATCAGTCGAATAACAAAAGCCCTTGATTTGAAAGAACATCTTCAGAAGACTGTAAAGAAGCTACCTGCAGGGATCAAGCGAAAGCTGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043961.12 |
||
| CDS GCA 90 bp | GTTGCTGGACTTAGAAAGACTTGCGGCTACCAGTTCTTTCTCATTTaGGTATTCTTCAGTAACTATAACCTTGGGAAGATGATCGGTAGA | + |
|
Preference number: 5 (lower is better) Translates to: VAGLRKTCGYQFFLI*VFFSNYNLGKMIGR Trigger: TCTACCGATCATCTTCCCAAGGTTATAGTTACTGAAGAATACGCAAATGAGAAAGAACTGGTAGCCGCAAGTCTTTCTAAGTCCAGCAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043961.12 ENSMUST00000124714.8 ENSMUST00000134721.2 |
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| CDS TCA 90 bp | AGTGTTGTAAGAGGAAAATCCACAGTATACACTGCAGGTAGGGCATaGTTACAGCAACTAAAAGTCTATCCCAGGGATTGTAGGTATTCT | + |
|
Preference number: 5 (lower is better) Translates to: SVVRGKSTVYTAGRA*LQQLKVYPRDCRYS Trigger: AGAATACCTACAATCCCTGGGATAGACTTTTAGTTGCTGTAATCATGCCCTACCTGCAGTGTATACTGTGGATTTTCCTCTTACAACACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043961.12 |
||
| CDS GCA 90 bp | GTCTTTGAAAACCACACCTACGAAGTTGCTGGACTTAGAAAGACTTaGGGCTACCAGTTCTTTCTCATTTGCGTATTCTTCAGTAACTAT | + |
|
Preference number: 5 (lower is better) Translates to: VFENHTYEVAGLRKT*GYQFFLICVFFSNY Trigger: ATAGTTACTGAAGAATACGCAAATGAGAAAGAACTGGTAGCCGCAAGTCTTTCTAAGTCCAGCAACTTCGTAGGTGTGGTTTTCAAAGAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000043961.12 ENSMUST00000124714.8 ENSMUST00000134721.2 |
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| CDS TCA 90 bp | TTGATGGCTTGCATGTCCAGATCCAGCAACACTTTCTGCACTTCTTaGATTATATTGTTGGCTGGTATTCCTTTGATTGAAGCCAAAATT | + |
|
Preference number: 5 (lower is better) Translates to: LMACMSRSSNTFCTS*IILLAGIPLIEAKI Trigger: AATTTTGGCTTCAATCAAAGGAATACCAGCCAACAATATAATTCAAGAAGTGCAGAAAGTGTTGCTGGATCTGGACATGCAAGCCATCAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043961.12 ENSMUST00000124714.8 |
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| CDS CCA 90 bp | AGCTTTGATCTTATGATTCTCTGCATTTTCCATGGCAAAGTAAGGTaGCATTGCAGTAACAATGATTCCAAGCAAAGCTGCTTGAAAATA | + |
|
Preference number: 5 (lower is better) Translates to: SFDLMILCIFHGKVR*HCSNNDSKQSCLKI Trigger: TATTTTCAAGCAGCTTTGCTTGGAATCATTGTTACTGCAATGCCACCTTACTTTGCCATGGAAAATGCAGAGAATCATAAGATCAAAGCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043961.12 ENSMUST00000124714.8 |
||
| CDS GCA 72 bp | TCATTCTGCTGCAGTAGCGCGGCTGCGGGTATGTGCTaGCTAACCAGCGACGACAGTGACTCTGTGGCACAG | + |
|
Preference number: 6 (lower is better) Translates to: SFCCSSAAAGMC*LTSDDSDSVAQ Trigger: CTGTGCCACAGAGTCACTGTCGTCGCTGGTTAGGCAGCACATACCCGCAGCCGCGCTACTGCAGCAGAATGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043961.12 ENSMUST00000124714.8 |
||
| CDS GCA 72 bp | TGGTCATTCTGCTGCAGTAGCGCGGCTGCGGGTATGTaGTGCCTAACCAGCGACGACAGTGACTCTGTGGCA | + |
|
Preference number: 6 (lower is better) Translates to: WSFCCSSAAAGM*CLTSDDSDSVA Trigger: TGCCACAGAGTCACTGTCGTCGCTGGTTAGGCAGCACATACCCGCAGCCGCGCTACTGCAGCAGAATGACCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043961.12 ENSMUST00000124714.8 |
||
| CDS GCA 72 bp | AAAGGCAGGCTGTACACGAGCTGCTGGTCATTCTGCTaGAGTAGCGCGGCTGCGGGTATGTGCTGCCTAACC | + |
|
Preference number: 6 (lower is better) Translates to: KGRLYTSCWSFC*SSAAAGMCCLT Trigger: GGTTAGGCAGCACATACCCGCAGCCGCGCTACTGCAGCAGAATGACCAGCAGCTCGTGTACAGCCTGCCTTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043961.12 ENSMUST00000124714.8 |
||
| CDS TCA 72 bp | GGAAGGTGTCAATCTCCACAACAGCGGCCTCTCCCATaGTCACAGCTTTGGTCGACTCCAGCTCGCTCCACA | + |
|
Preference number: 6 (lower is better) Translates to: GRCQSPQQRPLP*SQLWSTPARST Trigger: TGTGGAGCGAGCTGGAGTCGACCAAAGCTGTGATCATGGGAGAGGCCGCTGTTGTGGAGATTGACACCTTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043961.12 ENSMUST00000124714.8 |
||
| CDS GCA 72 bp | TTGTCCATGTCTTTGAAAGGCAGGCTGTACACGAGCTaGTGGTCATTCTGCTGCAGTAGCGCGGCTGCGGGT | + |
|
Preference number: 6 (lower is better) Translates to: LSMSLKGRLYTS*WSFCCSSAAAG Trigger: ACCCGCAGCCGCGCTACTGCAGCAGAATGACCAGCAGCTCGTGTACAGCCTGCCTTTCAAAGACATGGACAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043961.12 ENSMUST00000124714.8 |
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| CDS CAA 72 bp | ATCTCCACAACAGCGGCCTCTCCCATGATCACAGCTTaGGTCGACTCCAGCTCGCTCCACACAGAAACATTG | + |
|
Preference number: 6 (lower is better) Translates to: ISTTAASPMITA*VDSSSLHTETL Trigger: CAATGTTTCTGTGTGGAGCGAGCTGGAGTCGACCAAAGCTGTGATCATGGGAGAGGCCGCTGTTGTGGAGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043961.12 ENSMUST00000124714.8 |
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| CDS CAA 90 bp | AAGGTGTCAATCTCCACAACAGCGGCCTCTCCCATGATCACAGCTTaGGTCGACTCCAGCTCGCTCCACACAGAAACATTGGTCTTCAGC | + |
|
Preference number: 6 (lower is better) Translates to: KVSISTTAASPMITA*VDSSSLHTETLVFS Trigger: GCTGAAGACCAATGTTTCTGTGTGGAGCGAGCTGGAGTCGACCAAAGCTGTGATCATGGGAGAGGCCGCTGTTGTGGAGATTGACACCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043961.12 ENSMUST00000124714.8 |
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| CDS TCA 72 bp | TGCATGACCTGTGCAATCCCAATCAGAAAGGCACACTaGCACAAAGGACTGAAGAGCCACACCAGCGACCTG | + |
|
Preference number: 6 (lower is better) Translates to: CMTCAIPIRKAH*HKGLKSHTSDL Trigger: CAGGTCGCTGGTGTGGCTCTTCAGTCCTTTGTGTCAGTGTGCCTTTCTGATTGGGATTGCACAGGTCATGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043961.12 ENSMUST00000124714.8 |
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| CDS TCA 72 bp | GGCTGCGGGTATGTGCTGCCTAACCAGCGACGACAGTaGCTCTGTGGCACAGTATCTGTCTATATACATGCT | + |
|
Preference number: 6 (lower is better) Translates to: GCGYVLPNQRRQ*LCGTVSVYIHA Trigger: AGCATGTATATAGACAGATACTGTGCCACAGAGTCACTGTCGTCGCTGGTTAGGCAGCACATACCCGCAGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043961.12 ENSMUST00000124714.8 |
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| CDS CCA 72 bp | TCCTGTAGAGTGAGATCTGGCCACAGTGGGTTTGTCTaGGGGCAGTACCCCATACACTTAATGGATTCGTCA | + |
|
Preference number: 6 (lower is better) Translates to: SCRVRSGHSGFV*GQYPIHLMDSS Trigger: TGACGAATCCATTAAGTGTATGGGGTACTGCCCCCAGACAAACCCACTGTGGCCAGATCTCACTCTACAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043961.12 |
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| CDS TCA 72 bp | TCACAGCTCCGTAAATCTCAAAATGTTCCTGTAGAGTaGGATCTGGCCACAGTGGGTTTGTCTGGGGGCAGT | + |
|
Preference number: 6 (lower is better) Translates to: SQLRKSQNVPVE*DLATVGLSGGS Trigger: ACTGCCCCCAGACAAACCCACTGTGGCCAGATCTCACTCTACAGGAACATTTTGAGATTTACGGAGCTGTGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043961.12 |
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| CDS GCA 72 bp | AGTAGTCAGGAGGGCGGCCCGCTTTTTGTTTTTAAATaGAGTTCGAATAGCTCTCCACATGTGCTGCTTGGC | + |
|
Preference number: 6 (lower is better) Translates to: SSQEGGPLFVFK*SSNSSPHVLLG Trigger: GCCAAGCAGCACATGTGGAGAGCTATTCGAACTGCATTTAAAAACAAAAAGCGGGCCGCCCTCCTGACTACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000043961.12 |
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| CDS CAA 90 bp | GAAGTTGGCTCAACGTCCCCAACCAGAGTGTTAATGACTGTGCTTTaGCCAGCTCCATTTGGACCCAACAGTCCCAAGATCTCTCCTTTT | + |
|
Preference number: 6 (lower is better) Translates to: EVGSTSPTRVLMTVL*PAPFGPNSPKISPF Trigger: AAAAGGAGAGATCTTGGGACTGTTGGGTCCAAATGGAGCTGGCAAAAGCACAGTCATTAACACTCTGGTTGGGGACGTTGAGCCAACTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043961.12 |
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| CDS CAA 72 bp | GCTTTGGTCGACTCCAGCTCGCTCCACACAGAAACATaGGTCTTCAGCTGTATAATGGCAGCATCTATCGAT | + |
|
Preference number: 6 (lower is better) Translates to: ALVDSSSLHTET*VFSCIMAASID Trigger: ATCGATAGATGCTGCCATTATACAGCTGAAGACCAATGTTTCTGTGTGGAGCGAGCTGGAGTCGACCAAAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043961.12 ENSMUST00000124714.8 |
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| CDS CAA 90 bp | CCAGAGAGTGCTGGCCAAAGTCCCACAGCTGTTATCTTCTTCCTCTaGCTCTTTAGTAAGTTCTACAAAAACCTGTTCCAGGGTTGCTTG | + |
|
Preference number: 6 (lower is better) Translates to: PESAGQSPTAVIFFL*LFSKFYKNLFQGCL Trigger: CAAGCAACCCTGGAACAGGTTTTTGTAGAACTTACTAAAGAGCAAGAGGAAGAAGATAACAGCTGTGGGACTTTGGCCAGCACTCTCTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043961.12 |
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| CDS TCA 72 bp | GAGCAGAAAACAAGCCTGAAAATTTGTCCATGTCTTTaGAAGGCAGGCTGTACACGAGCTGCTGGTCATTCT | + |
|
Preference number: 6 (lower is better) Translates to: EQKTSLKICPCL*KAGCTRAAGHS Trigger: AGAATGACCAGCAGCTCGTGTACAGCCTGCCTTTCAAAGACATGGACAAATTTTCAGGCTTGTTTTCTGCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043961.12 ENSMUST00000124714.8 |
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| CDS GCA 72 bp | ATTGGTCTTCAGCTGTATAATGGCAGCATCTATCGATaGCTGCAGAACTGTAAACCCCAAAGACCAGTACTG | + |
|
Preference number: 6 (lower is better) Translates to: IGLQLYNGSIYR*LQNCKPQRPVL Trigger: CAGTACTGGTCTTTGGGGTTTACAGTTCTGCAGGCATCGATAGATGCTGCCATTATACAGCTGAAGACCAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043961.12 ENSMUST00000124714.8 |
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| CDS GCA 72 bp | CACTTGAATGTGAACCATAATCTCCTAGAAAGATCTTaGCTGAAGTTGGCTCAACGTCCCCAACCAGAGTGT | + |
|
Preference number: 6 (lower is better) Translates to: HLNVNHNLLERS*LKLAQRPQPEC Trigger: ACACTCTGGTTGGGGACGTTGAGCCAACTTCAGGCAAGATCTTTCTAGGAGATTATGGTTCACATTCAAGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043961.12 |
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| CDS CCA 72 bp | TTAGCCTTTCTATACTTTAGAAGATTCCAAACAATATaGCGAGAGCAGGGGTCCATTCCTGCTGTAGGCTCG | + |
|
Preference number: 6 (lower is better) Translates to: LAFLYFRRFQTI*REQGSIPAVGS Trigger: CGAGCCTACAGCAGGAATGGACCCCTGCTCTCGCCATATTGTTTGGAATCTTCTAAAGTATAGAAAGGCTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043961.12 ENSMUST00000124714.8 |
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| CDS GCA 72 bp | AACCACACCTACGAAGTTGCTGGACTTAGAAAGACTTaGGGCTACCAGTTCTTTCTCATTTGCGTATTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: NHTYEVAGLRKT*GYQFFLICVFF Trigger: GAAGAATACGCAAATGAGAAAGAACTGGTAGCCGCAAGTCTTTCTAAGTCCAGCAACTTCGTAGGTGTGGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043961.12 ENSMUST00000124714.8 ENSMUST00000134721.2 |
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| CDS CAA 72 bp | GTAATGTTAGTCACGGGAGTGTATCCAAGAATAACGTaGGAAAGGCTGAATTTGTCCATAGGGCTGAGCTCT | + |
|
Preference number: 6 (lower is better) Translates to: VMLVTGVYPRIT*ERLNLSIGLSS Trigger: AGAGCTCAGCCCTATGGACAAATTCAGCCTTTCCAACGTTATTCTTGGATACACTCCCGTGACTAACATTAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043961.12 ENSMUST00000124714.8 ENSMUST00000134721.2 |
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| CDS TCA 72 bp | TCTGACCACCGCTTAACTTTTTCGCTTGATTATCTTTaGTGGCTTGCATGTCCAGATCCAGCAACACTTTCT | + |
|
Preference number: 6 (lower is better) Translates to: SDHRLTFSLDYL*WLACPDPATLS Trigger: AGAAAGTGTTGCTGGATCTGGACATGCAAGCCATCAAAGATAATCAAGCGAAAAAGTTAAGCGGTGGTCAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000043961.12 ENSMUST00000124714.8 |
||
| CDS TCA 72 bp | CGCACTGATTTGCTTTCTCGTTTCAATGAGAGGAAATaGAACTTTGCAATCGTAGACACTTGCTGCTTCCAG | + |
|
Preference number: 6 (lower is better) Translates to: RTDLLSRFNERK*NFAIVDTCCFQ Trigger: CTGGAAGCAGCAAGTGTCTACGATTGCAAAGTTTCATTTCCTCTCATTGAAACGAGAAAGCAAATCAGTGCG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043961.12 ENSMUST00000124714.8 |
||
| CDS TCA 72 bp | GGGAATATCCACAACAGCTTGTCCAACCCAATAGGCTaGTGGCAAAAGACCCGAAAGTTTAAGTTGAGTATA | + |
|
Preference number: 6 (lower is better) Translates to: GNIHNSLSNPIG*WQKTRKFKLSI Trigger: TATACTCAACTTAAACTTTCGGGTCTTTTGCCATCAGCCTATTGGGTTGGACAAGCTGTTGTGGATATTCCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043961.12 ENSMUST00000124714.8 |
||
| CDS TCA 72 bp | AGAGGAAAATCCACAGTATACACTGCAGGTAGGGCATaGTTACAGCAACTAAAAGTCTATCCCAGGGATTGT | + |
|
Preference number: 6 (lower is better) Translates to: RGKSTVYTAGRA*LQQLKVYPRDC Trigger: ACAATCCCTGGGATAGACTTTTAGTTGCTGTAATCATGCCCTACCTGCAGTGTATACTGTGGATTTTCCTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043961.12 |
||
| CDS GCA 72 bp | GGCTATGCAGAAGGTGTAATGAAAGACAGCCGTAACTaGATATTGCAGAAAGAAAGTTGTTTCCGTGATTGC | + |
|
Preference number: 6 (lower is better) Translates to: GYAEGVMKDSRN*ILQKESCFRDC Trigger: GCAATCACGGAAACAACTTTCTTTCTGCAATATGCAGTTACGGCTGTCTTTCATTACACCTTCTGCATAGCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043961.12 ENSMUST00000124714.8 |
||
| CDS CCA 72 bp | TATGAAAGAAATCAGACAACCCAGGAGAGGGTAGATTaGAATGGCTATGCAGAAGGTGTAATGAAAGACAGC | + |
|
Preference number: 6 (lower is better) Translates to: YERNQTTQERVD*NGYAEGVMKDS Trigger: GCTGTCTTTCATTACACCTTCTGCATAGCCATTCCAATCTACCCTCTCCTGGGTTGTCTGATTTCTTTCATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043961.12 ENSMUST00000124714.8 |
||
| CDS CAA 72 bp | GGAGTGTATCCAAGAATAACGTTGGAAAGGCTGAATTaGTCCATAGGGCTGAGCTCTATATCAGATACCTCT | + |
|
Preference number: 6 (lower is better) Translates to: GVYPRITLERLN*SIGLSSISDTS Trigger: AGAGGTATCTGATATAGAGCTCAGCCCTATGGACAAATTCAGCCTTTCCAACGTTATTCTTGGATACACTCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043961.12 ENSMUST00000124714.8 ENSMUST00000134721.2 |
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| CDS CAA 90 bp | ATGCTGCTTGTAATGTTAGTCACGGGAGTGTATCCAAGAATAACGTaGGAAAGGCTGAATTTGTCCATAGGGCTGAGCTCTATATCAGAT | + |
|
Preference number: 6 (lower is better) Translates to: MLLVMLVTGVYPRIT*ERLNLSIGLSSISD Trigger: ATCTGATATAGAGCTCAGCCCTATGGACAAATTCAGCCTTTCCAACGTTATTCTTGGATACACTCCCGTGACTAACATTACAAGCAGCAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043961.12 ENSMUST00000124714.8 ENSMUST00000134721.2 |
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| CDS CCA 72 bp | CTTATGATTCTCTGCATTTTCCATGGCAAAGTAAGGTaGCATTGCAGTAACAATGATTCCAAGCAAAGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: LMILCIFHGKVR*HCSNNDSKQSC Trigger: GCAGCTTTGCTTGGAATCATTGTTACTGCAATGCCACCTTACTTTGCCATGGAAAATGCAGAGAATCATAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043961.12 ENSMUST00000124714.8 |
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| CDS CAA 90 bp | TTAGTCACGGGAGTGTATCCAAGAATAACGTTGGAAAGGCTGAATTaGTCCATAGGGCTGAGCTCTATATCAGATACCTCTTCATATTTC | + |
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Preference number: 6 (lower is better) Translates to: LVTGVYPRITLERLN*SIGLSSISDTSSYF Trigger: GAAATATGAAGAGGTATCTGATATAGAGCTCAGCCCTATGGACAAATTCAGCCTTTCCAACGTTATTCTTGGATACACTCCCGTGACTAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043961.12 ENSMUST00000124714.8 ENSMUST00000134721.2 |
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| CDS TCA 72 bp | CGCTTGATCCCTGCAGGTAGCTTCTTTACAGTCTTCTaGAGATGTTCTTTCAAATCAAGGGCTTTTGTTATT | + |
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Preference number: 6 (lower is better) Translates to: RLIPAGSFFTVF*RCSFKSRAFVI Trigger: AATAACAAAAGCCCTTGATTTGAAAGAACATCTTCAGAAGACTGTAAAGAAGCTACCTGCAGGGATCAAGCG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043961.12 |
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| CDS GCA 72 bp | CTTAGAAAGACTTGCGGCTACCAGTTCTTTCTCATTTaGGTATTCTTCAGTAACTATAACCTTGGGAAGATG | + |
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Preference number: 6 (lower is better) Translates to: LRKTCGYQFFLI*VFFSNYNLGKM Trigger: CATCTTCCCAAGGTTATAGTTACTGAAGAATACGCAAATGAGAAAGAACTGGTAGCCGCAAGTCTTTCTAAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043961.12 ENSMUST00000124714.8 ENSMUST00000134721.2 |
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| CDS GCA 72 bp | ATTCTCTGCATTTTCCATGGCAAAGTAAGGTGGCATTaGAGTAACAATGATTCCAAGCAAAGCTGCTTGAAA | + |
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Preference number: 6 (lower is better) Translates to: ILCIFHGKVRWH*SNNDSKQSCLK Trigger: TTTCAAGCAGCTTTGCTTGGAATCATTGTTACTGCAATGCCACCTTACTTTGCCATGGAAAATGCAGAGAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043961.12 ENSMUST00000124714.8 |
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| CDS CAA 90 bp | GCTTCTTTCCCTATAAATTCTGAAGAAACGGGCTCAACAATTTCATaGAGACTAATATTGCCATTAATGTTGCCCTCCGATAGCTCCTTA | + |
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Preference number: 6 (lower is better) Translates to: ASFPINSEETGSTIS*RLILPLMLPSDSSL Trigger: TAAGGAGCTATCGGAGGGCAACATTAATGGCAATATTAGTCTCAATGAAATTGTTGAGCCCGTTTCTTCAGAATTTATAGGGAAAGAAGC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043961.12 ENSMUST00000124714.8 |
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| CDS TCA 72 bp | TGCATGTCCAGATCCAGCAACACTTTCTGCACTTCTTaGATTATATTGTTGGCTGGTATTCCTTTGATTGAA | + |
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Preference number: 6 (lower is better) Translates to: CMSRSSNTFCTS*IILLAGIPLIE Trigger: TTCAATCAAAGGAATACCAGCCAACAATATAATTCAAGAAGTGCAGAAAGTGTTGCTGGATCTGGACATGCA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043961.12 ENSMUST00000124714.8 |
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| CDS GCA 72 bp | TTAGAAAATAAGGCACCCTCATTAAAATCTTCTAAATaGATGACCTGTGCAATCCCAATCAGAAAGGCACAC | + |
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Preference number: 6 (lower is better) Translates to: LENKAPSLKSSK*MTCAIPIRKAH Trigger: GTGTGCCTTTCTGATTGGGATTGCACAGGTCATGCATTTAGAAGATTTTAATGAGGGTGCCTTATTTTCTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043961.12 ENSMUST00000124714.8 |
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| CDS CAA 72 bp | CCTATAAATTCTGAAGAAACGGGCTCAACAATTTCATaGAGACTAATATTGCCATTAATGTTGCCCTCCGAT | + |
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Preference number: 6 (lower is better) Translates to: PINSEETGSTIS*RLILPLMLPSD Trigger: ATCGGAGGGCAACATTAATGGCAATATTAGTCTCAATGAAATTGTTGAGCCCGTTTCTTCAGAATTTATAGG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043961.12 ENSMUST00000124714.8 |
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