RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ABCA4 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000028125

Ensembl transcript IDs: ENSMUST00000013995.13, ENSMUST00000141135.5

Found 467 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS-3UTR GCA 90 bp CCACTCAGAATGAAAGTATCGCTAAGGCCAAAGCCACCAGTCAGGGGTTCTGGAGACCCCACTGCAGGCTaGTGCAAGGCTGGCCTTGGA +
Preference number: 4 (lower is better)
Translates to: PLRMKVSLRPKPPVRGSGDPTAG*CKAGLG
Trigger: TCCAAGGCCAGCCTTGCAGCAGCCTGCAGTGGGGTC...TCCAGAACCCCTGACTGGTGGCTTTGGCCTTAGCGATACTTTCATTCTGAGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000013995.13
CDS-3UTR GCA 90 bp ACAGGTGACCATTCTGATAGGTCAGTTTTGCCATCAGGAGTTCCGGTGAGCCAGCCACAGCATGCGGCGTaGCTGGGGATCCATCCCTGT +
Preference number: 4 (lower is better)
Translates to: TGDHSDRSVLPSGVPVSQPQHAA*LGIHPC
Trigger: ACAGGGATGGATCCCCAGGCACGCCGCATGCTGTGG...CTGGCTCACCGGAACTCCTGATGGCAAAACTGACCTATCAGAATGGTCACCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR CCA 90 bp AAAGCAGATCCACTCAGAATGAAAGTATCGCTAAGGCCAAAGCCACCAGTCAGGGCGCTGTGTCCTCTGTaGGGGTGGGAGCCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: KADPLRMKVSLRPKPPVRALCPL*GWEPSS
Trigger: GCTGGAGGGCTCCCACCCCCACAGAGGACACAGCGC...CCTGACTGGTGGCTTTGGCCTTAGCGATACTTTCATTCTGAGTGGATCTGCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR GCA 90 bp CCACTCAGAATGAAAGTATCGCTAAGGCCAAAGCCACCAGTCAGGGGTTCTGGATGGTGTTCCACAGCATaGGGCGTGCCTGGGGATCCA +
Preference number: 4 (lower is better)
Translates to: PLRMKVSLRPKPPVRGSGWCSTA*GVPGDP
Trigger: TGGATCCCCAGGCACGCCGCATGCTGTGGAACACCA...TCCAGAACCCCTGACTGGTGGCTTTGGCCTTAGCGATACTTTCATTCTGAGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR CCA 90 bp CCACTCAGAATGAAAGTATCGCTAAGGCCAAAGCCACCAGTCAGGGGTTCTGGACACTGTAGGGTGACCTaGGAGAGGGGACACAGGGCA +
Preference number: 4 (lower is better)
Translates to: PLRMKVSLRPKPPVRGSGHCRVT*ERGHRA
Trigger: TGCCCTGTGTCCCCTCTCCCAGGTCACCCTACAGTG...TCCAGAACCCCTGACTGGTGGCTTTGGCCTTAGCGATACTTTCATTCTGAGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000013995.13
CDS-3UTR CCA 90 bp CCACTCAGAATGAAAGTATCGCTAAGGCCAAAGCCACCAGTCAGGGGTTCTGGAGGCTCTGGGGAAGGTTaGCCCTTGGGAGGATCCACT +
Preference number: 4 (lower is better)
Translates to: PLRMKVSLRPKPPVRGSGGSGEG*PLGGST
Trigger: AGTGGATCCTCCCAAGGGCCAACCTTCCCCAGAGCC...TCCAGAACCCCTGACTGGTGGCTTTGGCCTTAGCGATACTTTCATTCTGAGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR CCA 90 bp CCCACACATCCATACCCTTCCCACTCCACAAAAGCAGATCCACTCAGAATGAAAGACACCGGGGTCCTCTaGCTCTGGGGAAGGTTGGCC +
Preference number: 4 (lower is better)
Translates to: PTHPYPSHSTKADPLRMKDTGVL*LWGRLA
Trigger: GGCCAACCTTCCCCAGAGCCAGAGGACCCCGGTGTC...TTTCATTCTGAGTGGATCTGCTTTTGTGGAGTGGGAAGGGTATGGATGTGTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR CCA 90 bp TCAGGGGTTCTGGATAAACAGGTGACCATTCTGATAGGTCAGTTTTGCCATCAGGCGCTGTGTCCTCTGTaGGGGTGGGAGCCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: SGVLDKQVTILIGQFCHQALCPL*GWEPSS
Trigger: GCTGGAGGGCTCCCACCCCCACAGAGGACACAGCGC...CTGATGGCAAAACTGACCTATCAGAATGGTCACCTGTTTATCCAGAACCCCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR CCA 90 bp TCAGGGGTTCTGGATAAACAGGTGACCATTCTGATAGGTCAGTTTTGCCATCAGGCTTGGCTTGCCAGCTaGCTCCAGCAGCCCGGGGGT +
Preference number: 4 (lower is better)
Translates to: SGVLDKQVTILIGQFCHQAWLAS*LQQPGG
Trigger: ACCCCCGGGCTGCTGGAGCCAGCTGGCAAGCCAAGC...CTGATGGCAAAACTGACCTATCAGAATGGTCACCTGTTTATCCAGAACCCCTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR CCA 90 bp CAGTCAGGGGTTCTGGATAAACAGGTGACCATTCTGATAGGTCAGTTTTGCCATGCTTGGCTTGCCAGCTaGCTCCAGCAGCCCGGGGGT +
Preference number: 4 (lower is better)
Translates to: QSGVLDKQVTILIGQFCHAWLAS*LQQPGG
Trigger: ACCCCCGGGCTGCTGGAGCCAGCTGGCAAGCCAAGC...ATGGCAAAACTGACCTATCAGAATGGTCACCTGTTTATCCAGAACCCCTGACTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR TCA 90 bp ACAGGTGACCATTCTGATAGGTCAGTTTTGCCATCAGGAGTTCCGGTGAGCCAGTTTCCCGCTCCGTTGTaGCCCAGGAACGCCGTGATT +
Preference number: 4 (lower is better)
Translates to: TGDHSDRSVLPSGVPVSQFPAPL*PRNAVI
Trigger: AATCACGGCGTTCCTGGGTCACAACGGAGCGGGAAA...CTGGCTCACCGGAACTCCTGATGGCAAAACTGACCTATCAGAATGGTCACCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000013995.13
CDS-3UTR TCA 90 bp CCACTCAGAATGAAAGTATCGCTAAGGCCAAAGCCACCAGTCAGGGGTTCTGGACCACATTCAGAAAGCTaGCCAGGGCATGCCAGCCCT +
Preference number: 4 (lower is better)
Translates to: PLRMKVSLRPKPPVRGSGPHSES*PGHASP
Trigger: AGGGCTGGCATGCCCTGGTCAGCTTTCTGAATGTGG...TCCAGAACCCCTGACTGGTGGCTTTGGCCTTAGCGATACTTTCATTCTGAGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR TCA 90 bp CCACTCAGAATGAAAGTATCGCTAAGGCCAAAGCCACCAGTCAGGGGTTCTGGACCATGCTGTGGGAGGTaGGAACCACAGCTCTCCCTT +
Preference number: 4 (lower is better)
Translates to: PLRMKVSLRPKPPVRGSGPCCGR*EPQLSL
Trigger: AAGGGAGAGCTGTGGTTCTCACCTCCCACAGCATGG...TCCAGAACCCCTGACTGGTGGCTTTGGCCTTAGCGATACTTTCATTCTGAGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR TCA 90 bp CCACTCAGAATGAAAGTATCGCTAAGGCCAAAGCCACCAGTCAGGGGTTCTGGACGTGGTCTGGGTGACTaGGTACTCCTCGATGAGCAG +
Preference number: 4 (lower is better)
Translates to: PLRMKVSLRPKPPVRGSGRGLGD*VLLDEQ
Trigger: CTGCTCATCGAGGAGTACTCAGTCACCCAGACCACG...TCCAGAACCCCTGACTGGTGGCTTTGGCCTTAGCGATACTTTCATTCTGAGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR GCA 90 bp AAAGCAGATCCACTCAGAATGAAAGTATCGCTAAGGCCAAAGCCACCAGTCAGGCTCTGGTGCTGCACTTaGAGGAGGGAGAGGGGTGGG +
Preference number: 4 (lower is better)
Translates to: KADPLRMKVSLRPKPPVRLWCCT*RRERGG
Trigger: CCCACCCCTCTCCCTCCTGCAAGTGCAGCACCAGAG...CCTGACTGGTGGCTTTGGCCTTAGCGATACTTTCATTCTGAGTGGATCTGCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR GCA 90 bp CTCCACAAAAGCAGATCCACTCAGAATGAAAGTATCGCTAAGGCCAAAGCCACCCTCTGGTGCTGCACTTaGAGGAGGGAGAGGGGTGGG +
Preference number: 4 (lower is better)
Translates to: LHKSRSTQNESIAKAKATLWCCT*RRERGG
Trigger: CCCACCCCTCTCCCTCCTGCAAGTGCAGCACCAGAG...GGTGGCTTTGGCCTTAGCGATACTTTCATTCTGAGTGGATCTGCTTTTGTGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR GCA 90 bp ACAGGTGACCATTCTGATAGGTCAGTTTTGCCATCAGGAGTTCCGGTGAGCCAGGTAGGACTTCAGTGCTaGGCTGTGTCCTCTGTGGGG +
Preference number: 4 (lower is better)
Translates to: TGDHSDRSVLPSGVPVSQVGLQC*AVSSVG
Trigger: CCCCACAGAGGACACAGCGCAGCACTGAAGTCCTAC...CTGGCTCACCGGAACTCCTGATGGCAAAACTGACCTATCAGAATGGTCACCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR GCA 90 bp CCACTCAGAATGAAAGTATCGCTAAGGCCAAAGCCACCAGTCAGGGGTTCTGGACACAGCTTGGCTCAGTaGCAGGTCAATGAGGCCCCT +
Preference number: 4 (lower is better)
Translates to: PLRMKVSLRPKPPVRGSGHSLAQ*QVNEAP
Trigger: AGGGGCCTCATTGACCTGGCACTGAGCCAAGCTGTG...TCCAGAACCCCTGACTGGTGGCTTTGGCCTTAGCGATACTTTCATTCTGAGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR GCA 90 bp ACAGGTGACCATTCTGATAGGTCAGTTTTGCCATCAGGAGTTCCGGTGAGCCAGCGCTGCCAGGGAAGTTaGCCTGGAAGAACTGCTCCA +
Preference number: 4 (lower is better)
Translates to: TGDHSDRSVLPSGVPVSQRCQGS*PGRTAP
Trigger: TGGAGCAGTTCTTCCAGGGCAACTTCCCTGGCAGCG...CTGGCTCACCGGAACTCCTGATGGCAAAACTGACCTATCAGAATGGTCACCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR CCA 90 bp ACTCAGAATGAAAGTATCGCTAAGGCCAAAGCCACCAGTCAGGGGTTCTGGATAACCTGGCCAAGGTGCTaGACCTCCGGGGTGTCCATG +
Preference number: 4 (lower is better)
Translates to: TQNESIAKAKATSQGFWITWPRC*TSGVSM
Trigger: CATGGACACCCCGGAGGTCCAGCACCTTGGCCAGGT...TATCCAGAACCCCTGACTGGTGGCTTTGGCCTTAGCGATACTTTCATTCTGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000013995.13
CDS-3UTR CCA 90 bp ACCCACACATCCATACCCTTCCCACTCCACAAAAGCAGATCCACTCAGAATGAAAGCTCGGCCCAAACCTaGCCAAGGTGCTGGACCTCC +
Preference number: 4 (lower is better)
Translates to: THTSIPFPLHKSRSTQNESSAQT*PRCWTS
Trigger: GGAGGTCCAGCACCTTGGCCAGGTTTGGGCCGAGCT...TTCATTCTGAGTGGATCTGCTTTTGTGGAGTGGGAAGGGTATGGATGTGTGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000013995.13
CDS-3UTR CCA 90 bp CAGAATGAAAGTATCGCTAAGGCCAAAGCCACCAGTCAGGGGTTCTGGATAAACGGAGCCTCCTCCCTCTaGGTACCCACACAGGAGGTC +
Preference number: 4 (lower is better)
Translates to: QNESIAKAKATSQGFWINGASSL*VPTQEV
Trigger: GACCTCCTGTGTGGGTACCCAGAGGGAGGAGGCTCC...GTTTATCCAGAACCCCTGACTGGTGGCTTTGGCCTTAGCGATACTTTCATTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000013995.13
CDS-3UTR CCA 90 bp CTCCACAAAAGCAGATCCACTCAGAATGAAAGTATCGCTAAGGCCAAAGCCACCCAGACGGTCCACAGCTaGCCGGCCACTGGGCTCAAA +
Preference number: 4 (lower is better)
Translates to: LHKSRSTQNESIAKAKATQTVHS*PATGLK
Trigger: TTTGAGCCCAGTGGCCGGCCAGCTGTGGACCGTCTG...GGTGGCTTTGGCCTTAGCGATACTTTCATTCTGAGTGGATCTGCTTTTGTGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000013995.13
CDS-3UTR CCA 90 bp GTCAGTTTTGCCATCAGGAGTTCCGGTGAGCCAGTGAATTTTGGTTTCTTTCTGGGGGTCCTCTGGCTCTaGGGAAGGTTGGCCCTTGGG +
Preference number: 4 (lower is better)
Translates to: VSFAIRSSGEPVNFGFFLGVLWL*GRLALG
Trigger: CCCAAGGGCCAACCTTCCCCAGAGCCAGAGGACCCC...CAGAAAGAAACCAAAATTCACTGGCTCACCGGAACTCCTGATGGCAAAACTGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR CCA 90 bp ACAAAAGCAGATCCACTCAGAATGAAAGTATCGCTAAGGCCAAAGCCACCAGTCGACACCGGGGTCCTCTaGCTCTGGGGAAGGTTGGCC +
Preference number: 4 (lower is better)
Translates to: TKADPLRMKVSLRPKPPVDTGVL*LWGRLA
Trigger: GGCCAACCTTCCCCAGAGCCAGAGGACCCCGGTGTC...GACTGGTGGCTTTGGCCTTAGCGATACTTTCATTCTGAGTGGATCTGCTTTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR CCA 90 bp ACAAAAGCAGATCCACTCAGAATGAAAGTATCGCTAAGGCCAAAGCCACCAGTCCAGGGTCCCTGTCCCTaGGCAGGCTGGCCCGTAAGA +
Preference number: 4 (lower is better)
Translates to: TKADPLRMKVSLRPKPPVQGPCP*AGWPVR
Trigger: TCTTACGGGCCAGCCTGCCCAGGGACAGGGACCCTG...GACTGGTGGCTTTGGCCTTAGCGATACTTTCATTCTGAGTGGATCTGCTTTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR CCA 90 bp TACCCTTCCCACTCCACAAAAGCAGATCCACTCAGAATGAAAGTATCGCTAAGGCAGGGTCCCTGTCCCTaGGCAGGCTGGCCCGTAAGA +
Preference number: 4 (lower is better)
Translates to: YPSHSTKADPLRMKVSLRQGPCP*AGWPVR
Trigger: TCTTACGGGCCAGCCTGCCCAGGGACAGGGACCCTG...CCTTAGCGATACTTTCATTCTGAGTGGATCTGCTTTTGTGGAGTGGGAAGGGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR CCA 90 bp CCCACACATCCATACCCTTCCCACTCCACAAAAGCAGATCCACTCAGAATGAAAAGCATGCGGCGTGCCTaGGGATCCATCCCTGTCGTG +
Preference number: 4 (lower is better)
Translates to: PTHPYPSHSTKADPLRMKSMRRA*GSIPVV
Trigger: CACGACAGGGATGGATCCCCAGGCACGCCGCATGCT...TTTCATTCTGAGTGGATCTGCTTTTGTGGAGTGGGAAGGGTATGGATGTGTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR CCA 90 bp ACAGGTGACCATTCTGATAGGTCAGTTTTGCCATCAGGAGTTCCGGTGAGCCAGTGGTCCAGCGTGGTCTaGGTGACTGAGTACTCCTCG +
Preference number: 4 (lower is better)
Translates to: TGDHSDRSVLPSGVPVSQWSSVV*VTEYSS
Trigger: CGAGGAGTACTCAGTCACCCAGACCACGCTGGACCA...CTGGCTCACCGGAACTCCTGATGGCAAAACTGACCTATCAGAATGGTCACCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR TCA 90 bp TCAGGGGTTCTGGATAAACAGGTGACCATTCTGATAGGTCAGTTTTGCCATCAGTCAGTGCCAGGTCAATaGGGCCCCTGCCCAGGCAGA +
Preference number: 4 (lower is better)
Translates to: SGVLDKQVTILIGQFCHQSVPGQ*GPCPGR
Trigger: TCTGCCTGGGCAGGGGCCTCATTGACCTGGCACTGA...CTGATGGCAAAACTGACCTATCAGAATGGTCACCTGTTTATCCAGAACCCCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR GCA 90 bp AGCCACCAGTCAGGGGTTCTGGATAAACAGGTGACCATTCTGATAGGTCAGTTTTGGCCCAGGGATACATaGCAGGGAACACCACTCCGG +
Preference number: 4 (lower is better)
Translates to: SHQSGVLDKQVTILIGQFWPRDT*QGTPLR
Trigger: CCGGAGTGGTGTTCCCTGGCATGTATCCCTGGGCCA...AAACTGACCTATCAGAATGGTCACCTGTTTATCCAGAACCCCTGACTGGTGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000013995.13
CDS-3UTR GCA 90 bp TCAGGGGTTCTGGATAAACAGGTGACCATTCTGATAGGTCAGTTTTGCCATCAGTGCAGCCCCAGGCCTTaGTCCTCAAAGCGGACCAGG +
Preference number: 4 (lower is better)
Translates to: SGVLDKQVTILIGQFCHQCSPRP*SSKRTR
Trigger: CCTGGTCCGCTTTGAGGAGCAAGGCCTGGGGCTGCA...CTGATGGCAAAACTGACCTATCAGAATGGTCACCTGTTTATCCAGAACCCCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000013995.13
CDS-3UTR GCA 90 bp GTCAGTTTTGCCATCAGGAGTTCCGGTGAGCCAGTGAATTTTGGTTTCTTTCTGCCACAGCATGCGGCGTaGCTGGGGATCCATCCCTGT +
Preference number: 4 (lower is better)
Translates to: VSFAIRSSGEPVNFGFFLPQHAA*LGIHPC
Trigger: ACAGGGATGGATCCCCAGGCACGCCGCATGCTGTGG...CAGAAAGAAACCAAAATTCACTGGCTCACCGGAACTCCTGATGGCAAAACTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR GCA 90 bp CCCACACATCCATACCCTTCCCACTCCACAAAAGCAGATCCACTCAGAATGAAATCTCCCTCTGCACGCTaGCAGGGAAGTTGCCCTGGA +
Preference number: 4 (lower is better)
Translates to: PTHPYPSHSTKADPLRMKSPSAR*QGSCPG
Trigger: TCCAGGGCAACTTCCCTGGCAGCGTGCAGAGGGAGA...TTTCATTCTGAGTGGATCTGCTTTTGTGGAGTGGGAAGGGTATGGATGTGTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR GCA 90 bp ACCCACACATCCATACCCTTCCCACTCCACAAAAGCAGATCCACTCAGAATGAATCTCCCTCTGCACGCTaGCAGGGAAGTTGCCCTGGA +
Preference number: 4 (lower is better)
Translates to: THTSIPFPLHKSRSTQNESPSAR*QGSCPG
Trigger: TCCAGGGCAACTTCCCTGGCAGCGTGCAGAGGGAGA...TTCATTCTGAGTGGATCTGCTTTTGTGGAGTGGGAAGGGTATGGATGTGTGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR CCA 90 bp CTCCACAAAAGCAGATCCACTCAGAATGAAAGTATCGCTAAGGCCAAAGCCACCCGACAGGATCCGCCCTaGGACCAGAATCCCAGTACC +
Preference number: 4 (lower is better)
Translates to: LHKSRSTQNESIAKAKATRQDPP*DQNPST
Trigger: GGTACTGGGATTCTGGTCCCAGGGCGGATCCTGTCG...GGTGGCTTTGGCCTTAGCGATACTTTCATTCTGAGTGGATCTGCTTTTGTGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000013995.13
CDS-3UTR CCA 90 bp CCCACACATCCATACCCTTCCCACTCCACAAAAGCAGATCCACTCAGAATGAAACAGGAGGGAGAGGGGTaGGCTGCTGTCCATTTCTGC +
Preference number: 4 (lower is better)
Translates to: PTHPYPSHSTKADPLRMKQEGEG*AAVHFC
Trigger: GCAGAAATGGACAGCAGCCCACCCCTCTCCCTCCTG...TTTCATTCTGAGTGGATCTGCTTTTGTGGAGTGGGAAGGGTATGGATGTGTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR CCA 90 bp AGCCACCAGTCAGGGGTTCTGGATAAACAGGTGACCATTCTGATAGGTCAGTTTTGTCCCTGGGCAGGCTaGCCCGTAAGATGGCGTTGT +
Preference number: 4 (lower is better)
Translates to: SHQSGVLDKQVTILIGQFCPWAG*PVRWRC
Trigger: ACAACGCCATCTTACGGGCCAGCCTGCCCAGGGACA...AAACTGACCTATCAGAATGGTCACCTGTTTATCCAGAACCCCTGACTGGTGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR CCA 90 bp ACAAAAGCAGATCCACTCAGAATGAAAGTATCGCTAAGGCCAAAGCCACCAGTCAGCATGCGGCGTGCCTaGGGATCCATCCCTGTCGTG +
Preference number: 4 (lower is better)
Translates to: TKADPLRMKVSLRPKPPVSMRRA*GSIPVV
Trigger: CACGACAGGGATGGATCCCCAGGCACGCCGCATGCT...GACTGGTGGCTTTGGCCTTAGCGATACTTTCATTCTGAGTGGATCTGCTTTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR CCA 90 bp CCACTCAGAATGAAAGTATCGCTAAGGCCAAAGCCACCAGTCAGGGGTTCTGGAAACTGGAGCATGCTGTaGTGTCTCTCCCTCTGCACG +
Preference number: 4 (lower is better)
Translates to: PLRMKVSLRPKPPVRGSGNWSML*CLSLCT
Trigger: CGTGCAGAGGGAGAGACACCACAGCATGCTCCAGTT...TCCAGAACCCCTGACTGGTGGCTTTGGCCTTAGCGATACTTTCATTCTGAGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR CCA 90 bp ACAAAAGCAGATCCACTCAGAATGAAAGTATCGCTAAGGCCAAAGCCACCAGTCGCAGCTGGAAGATCCTaGCCAGGGAGGACGAGGGGA +
Preference number: 4 (lower is better)
Translates to: TKADPLRMKVSLRPKPPVAAGRS*PGRTRG
Trigger: TCCCCTCGTCCTCCCTGGCCAGGATCTTCCAGCTGC...GACTGGTGGCTTTGGCCTTAGCGATACTTTCATTCTGAGTGGATCTGCTTTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR CCA 90 bp GTCAGTTTTGCCATCAGGAGTTCCGGTGAGCCAGTGAATTTTGGTTTCTTTCTGGCAGCTGGAAGATCCTaGCCAGGGAGGACGAGGGGA +
Preference number: 4 (lower is better)
Translates to: VSFAIRSSGEPVNFGFFLAAGRS*PGRTRG
Trigger: TCCCCTCGTCCTCCCTGGCCAGGATCTTCCAGCTGC...CAGAAAGAAACCAAAATTCACTGGCTCACCGGAACTCCTGATGGCAAAACTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR CCA 90 bp ACAGGTGACCATTCTGATAGGTCAGTTTTGCCATCAGGAGTTCCGGTGAGCCAGTGGGAAATGAGCAGCTaGAAGATCCTGGCCAGGGAG +
Preference number: 4 (lower is better)
Translates to: TGDHSDRSVLPSGVPVSQWEMSS*KILARE
Trigger: CTCCCTGGCCAGGATCTTCCAGCTGCTCATTTCCCA...CTGGCTCACCGGAACTCCTGATGGCAAAACTGACCTATCAGAATGGTCACCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR TCA 90 bp CTCCACAAAAGCAGATCCACTCAGAATGAAAGTATCGCTAAGGCCAAAGCCACCCGGCTGCGGATGGTGTaGTGGAATCGCTTGACTAGC +
Preference number: 4 (lower is better)
Translates to: LHKSRSTQNESIAKAKATRLRMV*WNRLTS
Trigger: GCTAGTCAAGCGATTCCATCACACCATCCGCAGCCG...GGTGGCTTTGGCCTTAGCGATACTTTCATTCTGAGTGGATCTGCTTTTGTGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR TCA 90 bp ACACATCCATACCCTTCCCACTCCACAAAAGCAGATCCACTCAGAATGAAAGTATCAGTGCCAGGTCAATaGGGCCCCTGCCCAGGCAGA +
Preference number: 4 (lower is better)
Translates to: THPYPSHSTKADPLRMKVSVPGQ*GPCPGR
Trigger: TCTGCCTGGGCAGGGGCCTCATTGACCTGGCACTGA...TACTTTCATTCTGAGTGGATCTGCTTTTGTGGAGTGGGAAGGGTATGGATGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR TCA 90 bp CACACATCCATACCCTTCCCACTCCACAAAAGCAGATCCACTCAGAATGAAAGTAGGTGCCCTTCACCATaGTGGCCAGCCGCGTACACA +
Preference number: 4 (lower is better)
Translates to: HTSIPFPLHKSRSTQNESRCPSP*WPAAYT
Trigger: TGTGTACGCGGCTGGCCATCATGGTGAAGGGCACCT...ACTTTCATTCTGAGTGGATCTGCTTTTGTGGAGTGGGAAGGGTATGGATGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR TCA 90 bp AAAGCAGATCCACTCAGAATGAAAGTATCGCTAAGGCCAAAGCCACCAGTCAGGCGTGGTCTGGGTGACTaGGTACTCCTCGATGAGCAG +
Preference number: 4 (lower is better)
Translates to: KADPLRMKVSLRPKPPVRRGLGD*VLLDEQ
Trigger: CTGCTCATCGAGGAGTACTCAGTCACCCAGACCACG...CCTGACTGGTGGCTTTGGCCTTAGCGATACTTTCATTCTGAGTGGATCTGCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR GCA 90 bp CTCCACAAAAGCAGATCCACTCAGAATGAAAGTATCGCTAAGGCCAAAGCCACCAGGGTGTCCATGAACTaGGACAAGGTGCGGAGCTCG +
Preference number: 4 (lower is better)
Translates to: LHKSRSTQNESIAKAKATRVSMN*DKVRSS
Trigger: CGAGCTCCGCACCTTGTCGCAGTTCATGGACACCCT...GGTGGCTTTGGCCTTAGCGATACTTTCATTCTGAGTGGATCTGCTTTTGTGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000013995.13
CDS-3UTR GCA 90 bp ACCCACACATCCATACCCTTCCCACTCCACAAAAGCAGATCCACTCAGAATGAACCCACTGCAGGCTGCTaGAAGGCTGGCCTTGGAAAA +
Preference number: 4 (lower is better)
Translates to: THTSIPFPLHKSRSTQNEPTAGC*KAGLGK
Trigger: TTTTCCAAGGCCAGCCTTGCAGCAGCCTGCAGTGGG...TTCATTCTGAGTGGATCTGCTTTTGTGGAGTGGGAAGGGTATGGATGTGTGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000013995.13
CDS-3UTR GCA 90 bp CTCCACAAAAGCAGATCCACTCAGAATGAAAGTATCGCTAAGGCCAAAGCCACCCCAATGTTGCTCCATTaGAGCCCCAGGCCTTGCTCC +
Preference number: 4 (lower is better)
Translates to: LHKSRSTQNESIAKAKATPMLLH*SPRPCS
Trigger: GGAGCAAGGCCTGGGGCTGCAATGGAGCAACATTGG...GGTGGCTTTGGCCTTAGCGATACTTTCATTCTGAGTGGATCTGCTTTTGTGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000013995.13
CDS-3UTR GCA 90 bp CCACTCAGAATGAAAGTATCGCTAAGGCCAAAGCCACCAGTCAGGGGTTCTGGACAAAGTCCTTGCGGCTaGGGATGGTGTGATGGAATC +
Preference number: 4 (lower is better)
Translates to: PLRMKVSLRPKPPVRGSGQSPCG*GWCDGI
Trigger: GATTCCATCACACCATCCGCAGCCGCAAGGACTTTG...TCCAGAACCCCTGACTGGTGGCTTTGGCCTTAGCGATACTTTCATTCTGAGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR GCA 90 bp ACAGGTGACCATTCTGATAGGTCAGTTTTGCCATCAGGAGTTCCGGTGAGCCAGCAAAGTCCTTGCGGCTaGGGATGGTGTGATGGAATC +
Preference number: 4 (lower is better)
Translates to: TGDHSDRSVLPSGVPVSQQSPCG*GWCDGI
Trigger: GATTCCATCACACCATCCGCAGCCGCAAGGACTTTG...CTGGCTCACCGGAACTCCTGATGGCAAAACTGACCTATCAGAATGGTCACCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR GCA 90 bp CCCACACATCCATACCCTTCCCACTCCACAAAAGCAGATCCACTCAGAATGAAAGCTTCTCTCTGGTGCTaGACTTGCAGGAGGGAGAGG +
Preference number: 4 (lower is better)
Translates to: PTHPYPSHSTKADPLRMKASLWC*TCRRER
Trigger: CCTCTCCCTCCTGCAAGTGCAGCACCAGAGAGAAGC...TTTCATTCTGAGTGGATCTGCTTTTGTGGAGTGGGAAGGGTATGGATGTGTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR GCA 90 bp AGCCACCAGTCAGGGGTTCTGGATAAACAGGTGACCATTCTGATAGGTCAGTTTCGCTGCCAGGGAAGTTaGCCTGGAAGAACTGCTCCA +
Preference number: 4 (lower is better)
Translates to: SHQSGVLDKQVTILIGQFRCQGS*PGRTAP
Trigger: TGGAGCAGTTCTTCCAGGGCAACTTCCCTGGCAGCG...AAACTGACCTATCAGAATGGTCACCTGTTTATCCAGAACCCCTGACTGGTGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR GCA 90 bp CAGAATGAAAGTATCGCTAAGGCCAAAGCCACCAGTCAGGGGTTCTGGATAAACTCTTCAAGCTTGGCTTaGCAGCTGGCTCCAGCAGCC +
Preference number: 4 (lower is better)
Translates to: QNESIAKAKATSQGFWINSSSLA*QLAPAA
Trigger: GGCTGCTGGAGCCAGCTGGCAAGCCAAGCTTGAAGA...GTTTATCCAGAACCCCTGACTGGTGGCTTTGGCCTTAGCGATACTTTCATTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR CCA 90 bp CTCCACAAAAGCAGATCCACTCAGAATGAAAGTATCGCTAAGGCCAAAGCCACCGAGGAGGTAAGGAGCTaGCCCAGGGATACATGCCAG +
Preference number: 4 (lower is better)
Translates to: LHKSRSTQNESIAKAKATEEVRS*PRDTCQ
Trigger: CTGGCATGTATCCCTGGGCCAGCTCCTTACCTCCTC...GGTGGCTTTGGCCTTAGCGATACTTTCATTCTGAGTGGATCTGCTTTTGTGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000013995.13
CDS-3UTR CCA 90 bp CTCCACAAAAGCAGATCCACTCAGAATGAAAGTATCGCTAAGGCCAAAGCCACCCAGCTGGCCGGCCACTaGGCTCAAAAACCTTCACCA +
Preference number: 4 (lower is better)
Translates to: LHKSRSTQNESIAKAKATQLAGH*AQKPSP
Trigger: TGGTGAAGGTTTTTGAGCCCAGTGGCCGGCCAGCTG...GGTGGCTTTGGCCTTAGCGATACTTTCATTCTGAGTGGATCTGCTTTTGTGGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000013995.13
CDS-3UTR CCA 90 bp AGCCACCAGTCAGGGGTTCTGGATAAACAGGTGACCATTCTGATAGGTCAGTTTTGGGGAACAGGTATGTaGGGCCTGGGCATACTGCCT +
Preference number: 4 (lower is better)
Translates to: SHQSGVLDKQVTILIGQFWGTGM*GLGILP
Trigger: AGGCAGTATGCCCAGGCCCCACATACCTGTTCCCCA...AAACTGACCTATCAGAATGGTCACCTGTTTATCCAGAACCCCTGACTGGTGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR CCA 90 bp CAGAATGAAAGTATCGCTAAGGCCAAAGCCACCAGTCAGGGGTTCTGGATAAACGGGAAGGTTGGCCCTTaGGAGGATCCACTTGTCCTG +
Preference number: 4 (lower is better)
Translates to: QNESIAKAKATSQGFWINGKVGP*EDPLVL
Trigger: CAGGACAAGTGGATCCTCCCAAGGGCCAACCTTCCC...GTTTATCCAGAACCCCTGACTGGTGGCTTTGGCCTTAGCGATACTTTCATTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR CCA 90 bp CACAAAAGCAGATCCACTCAGAATGAAAGTATCGCTAAGGCCAAAGCCACCAGTGGCTCTGGGGAAGGTTaGCCCTTGGGAGGATCCACT +
Preference number: 4 (lower is better)
Translates to: HKSRSTQNESIAKAKATSGSGEG*PLGGST
Trigger: AGTGGATCCTCCCAAGGGCCAACCTTCCCCAGAGCC...ACTGGTGGCTTTGGCCTTAGCGATACTTTCATTCTGAGTGGATCTGCTTTTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR CCA 90 bp CCACTCAGAATGAAAGTATCGCTAAGGCCAAAGCCACCAGTCAGGGGTTCTGGAACGGTTGCCAAAGCCTaGCCTGTTCAGAAGGACATC +
Preference number: 4 (lower is better)
Translates to: PLRMKVSLRPKPPVRGSGTVAKA*PVQKDI
Trigger: GATGTCCTTCTGAACAGGCCAGGCTTTGGCAACCGT...TCCAGAACCCCTGACTGGTGGCTTTGGCCTTAGCGATACTTTCATTCTGAGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR CCA 90 bp CAGTCAGGGGTTCTGGATAAACAGGTGACCATTCTGATAGGTCAGTTTTGCCATCAGGAGGGAGAGGGGTaGGCTGCTGTCCATTTCTGC +
Preference number: 4 (lower is better)
Translates to: QSGVLDKQVTILIGQFCHQEGEG*AAVHFC
Trigger: GCAGAAATGGACAGCAGCCCACCCCTCTCCCTCCTG...ATGGCAAAACTGACCTATCAGAATGGTCACCTGTTTATCCAGAACCCCTGACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR CCA 90 bp CACAAAAGCAGATCCACTCAGAATGAAAGTATCGCTAAGGCCAAAGCCACCAGTCCGAGAGCTGCTCCTTaGTCAGGTTCAGAGGCTGGC +
Preference number: 4 (lower is better)
Translates to: HKSRSTQNESIAKAKATSPRAAP*SGSEAG
Trigger: GCCAGCCTCTGAACCTGACCAAGGAGCAGCTCTCGG...ACTGGTGGCTTTGGCCTTAGCGATACTTTCATTCTGAGTGGATCTGCTTTTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR CCA 90 bp ACAGGTGACCATTCTGATAGGTCAGTTTTGCCATCAGGAGTTCCGGTGAGCCAGCCACATAGGCTGTGCTaGGGACTTCAAACAGGAAGG +
Preference number: 4 (lower is better)
Translates to: TGDHSDRSVLPSGVPVSQPHRLC*GLQTGR
Trigger: CCTTCCTGTTTGAAGTCCCCAGCACAGCCTATGTGG...CTGGCTCACCGGAACTCCTGATGGCAAAACTGACCTATCAGAATGGTCACCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR CCA 90 bp AAAGCAGATCCACTCAGAATGAAAGTATCGCTAAGGCCAAAGCCACCAGTCAGGGAGGGGACCTGGAACTaGAGCATGCTGTGGTGTCTC +
Preference number: 4 (lower is better)
Translates to: KADPLRMKVSLRPKPPVREGTWN*SMLWCL
Trigger: GAGACACCACAGCATGCTCCAGTTCCAGGTCCCCTC...CCTGACTGGTGGCTTTGGCCTTAGCGATACTTTCATTCTGAGTGGATCTGCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR CCA 90 bp TACCCTTCCCACTCCACAAAAGCAGATCCACTCAGAATGAAAGTATCGCTAAGGGAGGACGAGGGGACCTaGAACTGGAGCATGCTGTGG +
Preference number: 4 (lower is better)
Translates to: YPSHSTKADPLRMKVSLREDEGT*NWSMLW
Trigger: CCACAGCATGCTCCAGTTCCAGGTCCCCTCGTCCTC...CCTTAGCGATACTTTCATTCTGAGTGGATCTGCTTTTGTGGAGTGGGAAGGGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR TCA 90 bp CTCCACAAAAGCAGATCCACTCAGAATGAAAGTATCGCTAAGGCCAAAGCCACCAAATTCCAAAGCTGCTaGGCCCCAGGTCAGCCAGAG +
Preference number: 4 (lower is better)
Translates to: LHKSRSTQNESIAKAKATKFQSC*APGQPE
Trigger: CTCTGGCTGACCTGGGGCTCAGCAGCTTTGGAATTT...GGTGGCTTTGGCCTTAGCGATACTTTCATTCTGAGTGGATCTGCTTTTGTGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR TCA 90 bp TACCCTTCCCACTCCACAAAAGCAGATCCACTCAGAATGAAAGTATCGCTAAGGCGGCTGCGGATGGTGTaGTGGAATCGCTTGACTAGC +
Preference number: 4 (lower is better)
Translates to: YPSHSTKADPLRMKVSLRRLRMV*WNRLTS
Trigger: GCTAGTCAAGCGATTCCATCACACCATCCGCAGCCG...CCTTAGCGATACTTTCATTCTGAGTGGATCTGCTTTTGTGGAGTGGGAAGGGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR TCA 90 bp GTCAGTTTTGCCATCAGGAGTTCCGGTGAGCCAGTGAATTTTGGTTTCTTTCTGCCACATTCAGAAAGCTaGCCAGGGCATGCCAGCCCT +
Preference number: 4 (lower is better)
Translates to: VSFAIRSSGEPVNFGFFLPHSES*PGHASP
Trigger: AGGGCTGGCATGCCCTGGTCAGCTTTCTGAATGTGG...CAGAAAGAAACCAAAATTCACTGGCTCACCGGAACTCCTGATGGCAAAACTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR TCA 90 bp CACACATCCATACCCTTCCCACTCCACAAAAGCAGATCCACTCAGAATGAAAGTCCATGCTGTGGGAGGTaGGAACCACAGCTCTCCCTT +
Preference number: 4 (lower is better)
Translates to: HTSIPFPLHKSRSTQNESPCCGR*EPQLSL
Trigger: AAGGGAGAGCTGTGGTTCTCACCTCCCACAGCATGG...ACTTTCATTCTGAGTGGATCTGCTTTTGTGGAGTGGGAAGGGTATGGATGTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR TCA 90 bp GTTCTGGATAAACAGGTGACCATTCTGATAGGTCAGTTTTGCCATCAGGAGTTCAGGTGCCCTTCACCATaGTGGCCAGCCGCGTACACA +
Preference number: 4 (lower is better)
Translates to: VLDKQVTILIGQFCHQEFRCPSP*WPAAYT
Trigger: TGTGTACGCGGCTGGCCATCATGGTGAAGGGCACCT...GAACTCCTGATGGCAAAACTGACCTATCAGAATGGTCACCTGTTTATCCAGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR TCA 90 bp CACACATCCATACCCTTCCCACTCCACAAAAGCAGATCCACTCAGAATGAAAGTCTGAGTACTCCTCGATaGGCAGGCTGTCCTTGTGGG +
Preference number: 4 (lower is better)
Translates to: HTSIPFPLHKSRSTQNESLSTPR*AGCPCG
Trigger: CCCACAAGGACAGCCTGCTCATCGAGGAGTACTCAG...ACTTTCATTCTGAGTGGATCTGCTTTTGTGGAGTGGGAAGGGTATGGATGTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR GCA 90 bp TCAGGGGTTCTGGATAAACAGGTGACCATTCTGATAGGTCAGTTTTGCCATCAGAAGATGATGAAGCGCTaGAGGAGGGCCTCGCTGCAG +
Preference number: 4 (lower is better)
Translates to: SGVLDKQVTILIGQFCHQKMMKR*RRASLQ
Trigger: CTGCAGCGAGGCCCTCCTGCAGCGCTTCATCATCTT...CTGATGGCAAAACTGACCTATCAGAATGGTCACCTGTTTATCCAGAACCCCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000013995.13
CDS-3UTR GCA 90 bp CAGTCAGGGGTTCTGGATAAACAGGTGACCATTCTGATAGGTCAGTTTTGCCATTCAGGACCACCGTTCTaGAGGAGAGGTCTGCTCACC +
Preference number: 4 (lower is better)
Translates to: QSGVLDKQVTILIGQFCHSGPPF*RRGLLT
Trigger: GGTGAGCAGACCTCTCCTGCAGAACGGTGGTCCTGA...ATGGCAAAACTGACCTATCAGAATGGTCACCTGTTTATCCAGAACCCCTGACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000013995.13
CDS-3UTR GCA 90 bp CAGTCAGGGGTTCTGGATAAACAGGTGACCATTCTGATAGGTCAGTTTTGCCATGGACCAGGTACTCGGTaGCAAACCCAAATGCCACGG +
Preference number: 4 (lower is better)
Translates to: QSGVLDKQVTILIGQFCHGPGTR*QTQMPR
Trigger: CCGTGGCATTTGGGTTTGGCACCGAGTACCTGGTCC...ATGGCAAAACTGACCTATCAGAATGGTCACCTGTTTATCCAGAACCCCTGACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000013995.13
CDS-3UTR GCA 90 bp AGCCACCAGTCAGGGGTTCTGGATAAACAGGTGACCATTCTGATAGGTCAGTTTGAGCCACAAAGTCCTTaGGGCTGCGGATGGTGTGAT +
Preference number: 4 (lower is better)
Translates to: SHQSGVLDKQVTILIGQFEPQSP*GCGWCD
Trigger: ATCACACCATCCGCAGCCGCAAGGACTTTGTGGCTC...AAACTGACCTATCAGAATGGTCACCTGTTTATCCAGAACCCCTGACTGGTGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR GCA 90 bp CAGTCAGGGGTTCTGGATAAACAGGTGACCATTCTGATAGGTCAGTTTTGCCATGGGAGAGGGGTGGGCTaGTGTCCATTTCTGCTTCTG +
Preference number: 4 (lower is better)
Translates to: QSGVLDKQVTILIGQFCHGRGVG*CPFLLL
Trigger: CAGAAGCAGAAATGGACAGCAGCCCACCCCTCTCCC...ATGGCAAAACTGACCTATCAGAATGGTCACCTGTTTATCCAGAACCCCTGACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR GCA 90 bp TACCCTTCCCACTCCACAAAAGCAGATCCACTCAGAATGAAAGTATCGCTAAGGGGGAGAGGGGTGGGCTaGTGTCCATTTCTGCTTCTG +
Preference number: 4 (lower is better)
Translates to: YPSHSTKADPLRMKVSLRGRGVG*CPFLLL
Trigger: CAGAAGCAGAAATGGACAGCAGCCCACCCCTCTCCC...CCTTAGCGATACTTTCATTCTGAGTGGATCTGCTTTTGTGGAGTGGGAAGGGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR GCA 90 bp CACAAAAGCAGATCCACTCAGAATGAAAGTATCGCTAAGGCCAAAGCCACCAGTGCTTCTCTCTGGTGCTaGACTTGCAGGAGGGAGAGG +
Preference number: 4 (lower is better)
Translates to: HKSRSTQNESIAKAKATSASLWC*TCRRER
Trigger: CCTCTCCCTCCTGCAAGTGCAGCACCAGAGAGAAGC...ACTGGTGGCTTTGGCCTTAGCGATACTTTCATTCTGAGTGGATCTGCTTTTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR GCA 90 bp TCAGGGGTTCTGGATAAACAGGTGACCATTCTGATAGGTCAGTTTTGCCATCAGGTAGGACTTCAGTGCTaGGCTGTGTCCTCTGTGGGG +
Preference number: 4 (lower is better)
Translates to: SGVLDKQVTILIGQFCHQVGLQC*AVSSVG
Trigger: CCCCACAGAGGACACAGCGCAGCACTGAAGTCCTAC...CTGATGGCAAAACTGACCTATCAGAATGGTCACCTGTTTATCCAGAACCCCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR GCA 90 bp ACAGGTGACCATTCTGATAGGTCAGTTTTGCCATCAGGAGTTCCGGTGAGCCAGAAGCCACATAGGCTGTaGTGGGGACTTCAAACAGGA +
Preference number: 4 (lower is better)
Translates to: TGDHSDRSVLPSGVPVSQKPHRL*WGLQTG
Trigger: TCCTGTTTGAAGTCCCCAGCACAGCCTATGTGGCTT...CTGGCTCACCGGAACTCCTGATGGCAAAACTGACCTATCAGAATGGTCACCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR GCA 90 bp GTTCTGGATAAACAGGTGACCATTCTGATAGGTCAGTTTTGCCATCAGGAGTTCTGGTGTTCCACAGCATaGGGCGTGCCTGGGGATCCA +
Preference number: 4 (lower is better)
Translates to: VLDKQVTILIGQFCHQEFWCSTA*GVPGDP
Trigger: TGGATCCCCAGGCACGCCGCATGCTGTGGAACACCA...GAACTCCTGATGGCAAAACTGACCTATCAGAATGGTCACCTGTTTATCCAGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR GCA 90 bp CACACATCCATACCCTTCCCACTCCACAAAAGCAGATCCACTCAGAATGAAAGTTCTTCAAGCTTGGCTTaGCAGCTGGCTCCAGCAGCC +
Preference number: 4 (lower is better)
Translates to: HTSIPFPLHKSRSTQNESSSSLA*QLAPAA
Trigger: GGCTGCTGGAGCCAGCTGGCAAGCCAAGCTTGAAGA...ACTTTCATTCTGAGTGGATCTGCTTTTGTGGAGTGGGAAGGGTATGGATGTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR CCA 90 bp CTCCACAAAAGCAGATCCACTCAGAATGAAAGTATCGCTAAGGCCAAAGCCACCTTTTCCCATCAGCAATaGCTTTGCCGCCCTCCAGGC +
Preference number: 4 (lower is better)
Translates to: LHKSRSTQNESIAKAKATFSHQQ*LCRPPG
Trigger: GCCTGGAGGGCGGCAAAGCCATTGCTGATGGGAAAA...GGTGGCTTTGGCCTTAGCGATACTTTCATTCTGAGTGGATCTGCTTTTGTGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000013995.13
CDS-3UTR CCA 90 bp ACTCAGAATGAAAGTATCGCTAAGGCCAAAGCCACCAGTCAGGGGTTCTGGATAGGATGGACAAGGTGGTaGTCTTTCCCGCTCCGTTGT +
Preference number: 4 (lower is better)
Translates to: TQNESIAKAKATSQGFWIGWTRW*SFPLRC
Trigger: ACAACGGAGCGGGAAAGACCACCACCTTGTCCATCC...TATCCAGAACCCCTGACTGGTGGCTTTGGCCTTAGCGATACTTTCATTCTGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000013995.13
CDS-3UTR CCA 90 bp CCCACACATCCATACCCTTCCCACTCCACAAAAGCAGATCCACTCAGAATGAAATCAGGATGGACAAGGTaGTGGTCTTTCCCGCTCCGT +
Preference number: 4 (lower is better)
Translates to: PTHPYPSHSTKADPLRMKSGWTR*WSFPLR
Trigger: ACGGAGCGGGAAAGACCACCACCTTGTCCATCCTGA...TTTCATTCTGAGTGGATCTGCTTTTGTGGAGTGGGAAGGGTATGGATGTGTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000013995.13
CDS-3UTR CCA 90 bp TCAGGGGTTCTGGATAAACAGGTGACCATTCTGATAGGTCAGTTTTGCCATCAGGCTTCCATCTCAAGCTaGGCCTCCTCCCAGGATCTC +
Preference number: 4 (lower is better)
Translates to: SGVLDKQVTILIGQFCHQASISS*ASSQDL
Trigger: GAGATCCTGGGAGGAGGCCCAGCTTGAGATGGAAGC...CTGATGGCAAAACTGACCTATCAGAATGGTCACCTGTTTATCCAGAACCCCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000013995.13
CDS-3UTR CCA 90 bp CAGTCAGGGGTTCTGGATAAACAGGTGACCATTCTGATAGGTCAGTTTTGCCATGGGAAGGTTGGCCCTTaGGAGGATCCACTTGTCCTG +
Preference number: 4 (lower is better)
Translates to: QSGVLDKQVTILIGQFCHGKVGP*EDPLVL
Trigger: CAGGACAAGTGGATCCTCCCAAGGGCCAACCTTCCC...ATGGCAAAACTGACCTATCAGAATGGTCACCTGTTTATCCAGAACCCCTGACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR CCA 90 bp ACCCACACATCCATACCCTTCCCACTCCACAAAAGCAGATCCACTCAGAATGAACCAGGGAAGTTGCCCTaGAAGAACTGCTCCACAGGA +
Preference number: 4 (lower is better)
Translates to: THTSIPFPLHKSRSTQNEPGKLP*KNCSTG
Trigger: TCCTGTGGAGCAGTTCTTCCAGGGCAACTTCCCTGG...TTCATTCTGAGTGGATCTGCTTTTGTGGAGTGGGAAGGGTATGGATGTGTGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR CCA 90 bp CCCACACATCCATACCCTTCCCACTCCACAAAAGCAGATCCACTCAGAATGAAACCAGGGAAGTTGCCCTaGAAGAACTGCTCCACAGGA +
Preference number: 4 (lower is better)
Translates to: PTHPYPSHSTKADPLRMKPGKLP*KNCSTG
Trigger: TCCTGTGGAGCAGTTCTTCCAGGGCAACTTCCCTGG...TTTCATTCTGAGTGGATCTGCTTTTGTGGAGTGGGAAGGGTATGGATGTGTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR CCA 90 bp AAAGCAGATCCACTCAGAATGAAAGTATCGCTAAGGCCAAAGCCACCAGTCAGGAACTGGAGCATGCTGTaGTGTCTCTCCCTCTGCACG +
Preference number: 4 (lower is better)
Translates to: KADPLRMKVSLRPKPPVRNWSML*CLSLCT
Trigger: CGTGCAGAGGGAGAGACACCACAGCATGCTCCAGTT...CCTGACTGGTGGCTTTGGCCTTAGCGATACTTTCATTCTGAGTGGATCTGCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR CCA 90 bp CACAAAAGCAGATCCACTCAGAATGAAAGTATCGCTAAGGCCAAAGCCACCAGTGAGGGGACCTGGAACTaGAGCATGCTGTGGTGTCTC +
Preference number: 4 (lower is better)
Translates to: HKSRSTQNESIAKAKATSEGTWN*SMLWCL
Trigger: GAGACACCACAGCATGCTCCAGTTCCAGGTCCCCTC...ACTGGTGGCTTTGGCCTTAGCGATACTTTCATTCTGAGTGGATCTGCTTTTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR CCA 90 bp GTTCTGGATAAACAGGTGACCATTCTGATAGGTCAGTTTTGCCATCAGGAGTTCGAGGACGAGGGGACCTaGAACTGGAGCATGCTGTGG +
Preference number: 4 (lower is better)
Translates to: VLDKQVTILIGQFCHQEFEDEGT*NWSMLW
Trigger: CCACAGCATGCTCCAGTTCCAGGTCCCCTCGTCCTC...GAACTCCTGATGGCAAAACTGACCTATCAGAATGGTCACCTGTTTATCCAGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR CCA 90 bp CACAAAAGCAGATCCACTCAGAATGAAAGTATCGCTAAGGCCAAAGCCACCAGTTGGTCCAGCGTGGTCTaGGTGACTGAGTACTCCTCG +
Preference number: 4 (lower is better)
Translates to: HKSRSTQNESIAKAKATSWSSVV*VTEYSS
Trigger: CGAGGAGTACTCAGTCACCCAGACCACGCTGGACCA...ACTGGTGGCTTTGGCCTTAGCGATACTTTCATTCTGAGTGGATCTGCTTTTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR TCA 90 bp GTCAGTTTTGCCATCAGGAGTTCCGGTGAGCCAGTGAATTTTGGTTTCTTTCTGTGCTCATCAGCTGTGTaGAGGTCTCAGGACCACCGT +
Preference number: 4 (lower is better)
Translates to: VSFAIRSSGEPVNFGFFLCSSAV*RSQDHR
Trigger: ACGGTGGTCCTGAGACCTTCACACAGCTGATGAGCA...CAGAAAGAAACCAAAATTCACTGGCTCACCGGAACTCCTGATGGCAAAACTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000013995.13
CDS-3UTR TCA 90 bp AGCCACCAGTCAGGGGTTCTGGATAAACAGGTGACCATTCTGATAGGTCAGTTTGCCTCGTCCATGTGGTaGGTGGACATGATGATGGTT +
Preference number: 4 (lower is better)
Translates to: SHQSGVLDKQVTILIGQFASSMW*VDMMMV
Trigger: AACCATCATCATGTCCACTCACCACATGGACGAGGC...AAACTGACCTATCAGAATGGTCACCTGTTTATCCAGAACCCCTGACTGGTGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000013995.13
CDS-3UTR TCA 90 bp TCAGGGGTTCTGGATAAACAGGTGACCATTCTGATAGGTCAGTTTTGCCATCAGGCAGGGAGAACAATCTaGGCCACAAAGTCCTTGCGG +
Preference number: 4 (lower is better)
Translates to: SGVLDKQVTILIGQFCHQAGRTI*ATKSLR
Trigger: CCGCAAGGACTTTGTGGCTCAGATTGTTCTCCCTGC...CTGATGGCAAAACTGACCTATCAGAATGGTCACCTGTTTATCCAGAACCCCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR TCA 90 bp CAGTCAGGGGTTCTGGATAAACAGGTGACCATTCTGATAGGTCAGTTTTGCCATGCAGGGAGAACAATCTaGGCCACAAAGTCCTTGCGG +
Preference number: 4 (lower is better)
Translates to: QSGVLDKQVTILIGQFCHAGRTI*ATKSLR
Trigger: CCGCAAGGACTTTGTGGCTCAGATTGTTCTCCCTGC...ATGGCAAAACTGACCTATCAGAATGGTCACCTGTTTATCCAGAACCCCTGACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR TCA 90 bp AGCCACCAGTCAGGGGTTCTGGATAAACAGGTGACCATTCTGATAGGTCAGTTTGGTGTTCTCTGCCTGTaGGCAGGTCATCGATTGCAT +
Preference number: 4 (lower is better)
Translates to: SHQSGVLDKQVTILIGQFGVLCL*AGHRLH
Trigger: ATGCAATCGATGACCTGCTCACAGGCAGAGAACACC...AAACTGACCTATCAGAATGGTCACCTGTTTATCCAGAACCCCTGACTGGTGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR TCA 90 bp CTCCACAAAAGCAGATCCACTCAGAATGAAAGTATCGCTAAGGCCAAAGCCACCATGGTACCCAGACACTaGAAGGTGCCCTTCACCATG +
Preference number: 4 (lower is better)
Translates to: LHKSRSTQNESIAKAKATMVPRH*KVPFTM
Trigger: CATGGTGAAGGGCACCTTTCAGTGTCTGGGTACCAT...GGTGGCTTTGGCCTTAGCGATACTTTCATTCTGAGTGGATCTGCTTTTGTGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR TCA 90 bp ACCCACACATCCATACCCTTCCCACTCCACAAAAGCAGATCCACTCAGAATGAATGTCCTTGTGGGAAATaGGCAGCTGGAAGATCCTGG +
Preference number: 4 (lower is better)
Translates to: THTSIPFPLHKSRSTQNECPCGK*AAGRSW
Trigger: CCAGGATCTTCCAGCTGCTCATTTCCCACAAGGACA...TTCATTCTGAGTGGATCTGCTTTTGTGGAGTGGGAAGGGTATGGATGTGTGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR TCA 90 bp TTCCCACTCCACAAAAGCAGATCCACTCAGAATGAAAGTATCGCTAAGGCCAAACTGAGTACTCCTCGATaGGCAGGCTGTCCTTGTGGG +
Preference number: 4 (lower is better)
Translates to: FPLHKSRSTQNESIAKAKLSTPR*AGCPCG
Trigger: CCCACAAGGACAGCCTGCTCATCGAGGAGTACTCAG...TTTGGCCTTAGCGATACTTTCATTCTGAGTGGATCTGCTTTTGTGGAGTGGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR GCA 90 bp CCCACACATCCATACCCTTCCCACTCCACAAAAGCAGATCCACTCAGAATGAAATGTGTTGTGGACACATaGCCAGGCTCTGCCGTACTA +
Preference number: 4 (lower is better)
Translates to: PTHPYPSHSTKADPLRMKCVVDT*PGSAVL
Trigger: TAGTACGGCAGAGCCTGGGCATGTGTCCACAACACA...TTTCATTCTGAGTGGATCTGCTTTTGTGGAGTGGGAAGGGTATGGATGTGTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000013995.13
CDS-3UTR GCA 90 bp AAAGCAGATCCACTCAGAATGAAAGTATCGCTAAGGCCAAAGCCACCAGTCAGGACAGACAGCTTCCTCTaGATGCCACCTGAAAGGTCC +
Preference number: 4 (lower is better)
Translates to: KADPLRMKVSLRPKPPVRTDSFL*MPPERS
Trigger: GGACCTTTCAGGTGGCATGCAGAGGAAGCTGTCTGT...CCTGACTGGTGGCTTTGGCCTTAGCGATACTTTCATTCTGAGTGGATCTGCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000013995.13
CDS-3UTR GCA 90 bp GTCAGTTTTGCCATCAGGAGTTCCGGTGAGCCAGTGAATTTTGGTTTCTTTCTGCCTTTGATGTACAGCTaGAGACCCCCTCACAGCCAC +
Preference number: 4 (lower is better)
Translates to: VSFAIRSSGEPVNFGFFLPLMYS*RPPHSH
Trigger: GTGGCTGTGAGGGGGTCTGCAGCTGTACATCAAAGG...CAGAAAGAAACCAAAATTCACTGGCTCACCGGAACTCCTGATGGCAAAACTGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000013995.13
CDS-3UTR GCA 90 bp CCCACACATCCATACCCTTCCCACTCCACAAAAGCAGATCCACTCAGAATGAAAGCATTCCACCAGCTTTaGCTCTGGGACATGGTGGTA +
Preference number: 4 (lower is better)
Translates to: PTHPYPSHSTKADPLRMKAFHQL*LWDMVV
Trigger: TACCACCATGTCCCAGAGGCAAAGCTGGTGGAATGC...TTTCATTCTGAGTGGATCTGCTTTTGTGGAGTGGGAAGGGTATGGATGTGTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR GCA 90 bp GTCAGTTTTGCCATCAGGAGTTCCGGTGAGCCAGTGAATTTTGGTTTCTTTCTGGAGCCACAAAGTCCTTaGGGCTGCGGATGGTGTGAT +
Preference number: 4 (lower is better)
Translates to: VSFAIRSSGEPVNFGFFLEPQSP*GCGWCD
Trigger: ATCACACCATCCGCAGCCGCAAGGACTTTGTGGCTC...CAGAAAGAAACCAAAATTCACTGGCTCACCGGAACTCCTGATGGCAAAACTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR GCA 90 bp ACTCAGAATGAAAGTATCGCTAAGGCCAAAGCCACCAGTCAGGGGTTCTGGATAGCTGCTGTCCATTTCTaGTTCTGGAACAGGTGGGTG +
Preference number: 4 (lower is better)
Translates to: TQNESIAKAKATSQGFWIAAVHF*FWNRWV
Trigger: CACCCACCTGTTCCAGAAGCAGAAATGGACAGCAGC...TATCCAGAACCCCTGACTGGTGGCTTTGGCCTTAGCGATACTTTCATTCTGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR GCA 90 bp ACACATCCATACCCTTCCCACTCCACAAAAGCAGATCCACTCAGAATGAAAGTACACAGCTTGGCTCAGTaGCAGGTCAATGAGGCCCCT +
Preference number: 4 (lower is better)
Translates to: THPYPSHSTKADPLRMKVHSLAQ*QVNEAP
Trigger: AGGGGCCTCATTGACCTGGCACTGAGCCAAGCTGTG...TACTTTCATTCTGAGTGGATCTGCTTTTGTGGAGTGGGAAGGGTATGGATGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR GCA 90 bp CCCACACATCCATACCCTTCCCACTCCACAAAAGCAGATCCACTCAGAATGAAATGTGGTGGTTTTGCCTaGACCATTCACTCCCAGGAG +
Preference number: 4 (lower is better)
Translates to: PTHPYPSHSTKADPLRMKCGGFA*TIHSQE
Trigger: CTCCTGGGAGTGAATGGTGCAGGCAAAACCACCACA...TTTCATTCTGAGTGGATCTGCTTTTGTGGAGTGGGAAGGGTATGGATGTGTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR GCA 90 bp ACAGGTGACCATTCTGATAGGTCAGTTTTGCCATCAGGAGTTCCGGTGAGCCAGAGAGTTTCCTCTTATTaGCTCCACTGTAGGTGCCTG +
Preference number: 4 (lower is better)
Translates to: TGDHSDRSVLPSGVPVSQRVSSY*LHCRCL
Trigger: CAGGCACCTACAGTGGAGGCAATAAGAGGAAACTCT...CTGGCTCACCGGAACTCCTGATGGCAAAACTGACCTATCAGAATGGTCACCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR GCA 90 bp CCACTCAGAATGAAAGTATCGCTAAGGCCAAAGCCACCAGTCAGGGGTTCTGGATTGCCCTGGAAGAACTaGTCCACAGGATTCAAATCG +
Preference number: 4 (lower is better)
Translates to: PLRMKVSLRPKPPVRGSGLPWKN*STGFKS
Trigger: CGATTTGAATCCTGTGGAGCAGTTCTTCCAGGGCAA...TCCAGAACCCCTGACTGGTGGCTTTGGCCTTAGCGATACTTTCATTCTGAGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR GCA 90 bp CTCCACAAAAGCAGATCCACTCAGAATGAAAGTATCGCTAAGGCCAAAGCCACCCAGTTGTTCAGATCCTaGGGGCAAAGGCTCCTGTGT +
Preference number: 4 (lower is better)
Translates to: LHKSRSTQNESIAKAKATQLFRS*GQRLLC
Trigger: ACACAGGAGCCTTTGCCCGCAGGATCTGAACAACTG...GGTGGCTTTGGCCTTAGCGATACTTTCATTCTGAGTGGATCTGCTTTTGTGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR CCA 90 bp CACACATCCATACCCTTCCCACTCCACAAAAGCAGATCCACTCAGAATGAAAGTAAGAAGTACCAGATCTaGGGCCCCACTTCCTCCCAG +
Preference number: 4 (lower is better)
Translates to: HTSIPFPLHKSRSTQNESKKYQI*GPTSSQ
Trigger: CTGGGAGGAAGTGGGGCCCCAGATCTGGTACTTCTT...ACTTTCATTCTGAGTGGATCTGCTTTTGTGGAGTGGGAAGGGTATGGATGTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000013995.13
CDS-3UTR CCA 90 bp CAGTCAGGGGTTCTGGATAAACAGGTGACCATTCTGATAGGTCAGTTTTGCCATGAAGTACCAGGGAAGTaGGGTCCCATAGTCTCCTGG +
Preference number: 4 (lower is better)
Translates to: QSGVLDKQVTILIGQFCHEVPGK*GPIVSW
Trigger: CCAGGAGACTATGGGACCCCACTTCCCTGGTACTTC...ATGGCAAAACTGACCTATCAGAATGGTCACCTGTTTATCCAGAACCCCTGACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000013995.13
CDS-3UTR CCA 90 bp ACACATCCATACCCTTCCCACTCCACAAAAGCAGATCCACTCAGAATGAAAGTATGGGGAACAGGTATGTaGGGCCTGGGCATACTGCCT +
Preference number: 4 (lower is better)
Translates to: THPYPSHSTKADPLRMKVWGTGM*GLGILP
Trigger: AGGCAGTATGCCCAGGCCCCACATACCTGTTCCCCA...TACTTTCATTCTGAGTGGATCTGCTTTTGTGGAGTGGGAAGGGTATGGATGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR CCA 90 bp CCACTCAGAATGAAAGTATCGCTAAGGCCAAAGCCACCAGTCAGGGGTTCTGGACCAAGAACACGAAAGTaGCAGGGAGAACAATCTGAG +
Preference number: 4 (lower is better)
Translates to: PLRMKVSLRPKPPVRGSGPRTRK*QGEQSE
Trigger: CTCAGATTGTTCTCCCTGCCACTTTCGTGTTCTTGG...TCCAGAACCCCTGACTGGTGGCTTTGGCCTTAGCGATACTTTCATTCTGAGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR CCA 90 bp AGCCACCAGTCAGGGGTTCTGGATAAACAGGTGACCATTCTGATAGGTCAGTTTACGGTTGCCAAAGCCTaGCCTGTTCAGAAGGACATC +
Preference number: 4 (lower is better)
Translates to: SHQSGVLDKQVTILIGQFTVAKA*PVQKDI
Trigger: GATGTCCTTCTGAACAGGCCAGGCTTTGGCAACCGT...AAACTGACCTATCAGAATGGTCACCTGTTTATCCAGAACCCCTGACTGGTGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR CCA 90 bp GTCAGTTTTGCCATCAGGAGTTCCGGTGAGCCAGTGAATTTTGGTTTCTTTCTGTGCTTCTGGAACAGGTaGGTGATGTTCGGGGACACG +
Preference number: 4 (lower is better)
Translates to: VSFAIRSSGEPVNFGFFLCFWNR*VMFGDT
Trigger: CGTGTCCCCGAACATCACCCACCTGTTCCAGAAGCA...CAGAAAGAAACCAAAATTCACTGGCTCACCGGAACTCCTGATGGCAAAACTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR CCA 90 bp CACAAAAGCAGATCCACTCAGAATGAAAGTATCGCTAAGGCCAAAGCCACCAGTTGCTTCTGGAACAGGTaGGTGATGTTCGGGGACACG +
Preference number: 4 (lower is better)
Translates to: HKSRSTQNESIAKAKATSCFWNR*VMFGDT
Trigger: CGTGTCCCCGAACATCACCCACCTGTTCCAGAAGCA...ACTGGTGGCTTTGGCCTTAGCGATACTTTCATTCTGAGTGGATCTGCTTTTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR CCA 90 bp TACCCTTCCCACTCCACAAAAGCAGATCCACTCAGAATGAAAGTATCGCTAAGGGGCTGGCCCGTAAGATaGCGTTGTGAGCCACATTCA +
Preference number: 4 (lower is better)
Translates to: YPSHSTKADPLRMKVSLRGWPVR*RCEPHS
Trigger: TGAATGTGGCTCACAACGCCATCTTACGGGCCAGCC...CCTTAGCGATACTTTCATTCTGAGTGGATCTGCTTTTGTGGAGTGGGAAGGGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR CCA 90 bp CACACATCCATACCCTTCCCACTCCACAAAAGCAGATCCACTCAGAATGAAAGTCTGCCCAGGCAGAAGTaGGGGAAGACAATGAGCAAC +
Preference number: 4 (lower is better)
Translates to: HTSIPFPLHKSRSTQNESLPRQK*GKTMSN
Trigger: GTTGCTCATTGTCTTCCCCCACTTCTGCCTGGGCAG...ACTTTCATTCTGAGTGGATCTGCTTTTGTGGAGTGGGAAGGGTATGGATGTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR CCA 90 bp ACACATCCATACCCTTCCCACTCCACAAAAGCAGATCCACTCAGAATGAAAGTAGACAAGCCCAGGCTCTaGATACCCCAGTTGGCAACC +
Preference number: 4 (lower is better)
Translates to: THPYPSHSTKADPLRMKVDKPRL*IPQLAT
Trigger: GGTTGCCAACTGGGGTATCCAGAGCCTGGGCTTGTC...TACTTTCATTCTGAGTGGATCTGCTTTTGTGGAGTGGGAAGGGTATGGATGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR CCA 90 bp GTTCTGGATAAACAGGTGACCATTCTGATAGGTCAGTTTTGCCATCAGGAGTTCGACAAGCCCAGGCTCTaGATACCCCAGTTGGCAACC +
Preference number: 4 (lower is better)
Translates to: VLDKQVTILIGQFCHQEFDKPRL*IPQLAT
Trigger: GGTTGCCAACTGGGGTATCCAGAGCCTGGGCTTGTC...GAACTCCTGATGGCAAAACTGACCTATCAGAATGGTCACCTGTTTATCCAGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR CCA 90 bp TACCCTTCCCACTCCACAAAAGCAGATCCACTCAGAATGAAAGTATCGCTAAGGTGGGAAATGAGCAGCTaGAAGATCCTGGCCAGGGAG +
Preference number: 4 (lower is better)
Translates to: YPSHSTKADPLRMKVSLRWEMSS*KILARE
Trigger: CTCCCTGGCCAGGATCTTCCAGCTGCTCATTTCCCA...CCTTAGCGATACTTTCATTCTGAGTGGATCTGCTTTTGTGGAGTGGGAAGGGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR TCA 90 bp CTCCACAAAAGCAGATCCACTCAGAATGAAAGTATCGCTAAGGCCAAAGCCACCATCTTGTACTTCACATaGGGAGGTAAGGAGCTGGCC +
Preference number: 4 (lower is better)
Translates to: LHKSRSTQNESIAKAKATILYFT*GGKELA
Trigger: GGCCAGCTCCTTACCTCCTCATGTGAAGTACAAGAT...GGTGGCTTTGGCCTTAGCGATACTTTCATTCTGAGTGGATCTGCTTTTGTGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000013995.13
CDS-3UTR TCA 90 bp CAGTCAGGGGTTCTGGATAAACAGGTGACCATTCTGATAGGTCAGTTTTGCCATTGTCTTTTCCCCCAATaGGCACAGTTCCTGACGTCG +
Preference number: 4 (lower is better)
Translates to: QSGVLDKQVTILIGQFCHCLFPQ*AQFLTS
Trigger: CGACGTCAGGAACTGTGCTCATTGGGGGAAAAGACA...ATGGCAAAACTGACCTATCAGAATGGTCACCTGTTTATCCAGAACCCCTGACTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000013995.13
CDS-3UTR TCA 90 bp ACACATCCATACCCTTCCCACTCCACAAAAGCAGATCCACTCAGAATGAAAGTAAAATTCCAAAGCTGCTaGGCCCCAGGTCAGCCAGAG +
Preference number: 4 (lower is better)
Translates to: THPYPSHSTKADPLRMKVKFQSC*APGQPE
Trigger: CTCTGGCTGACCTGGGGCTCAGCAGCTTTGGAATTT...TACTTTCATTCTGAGTGGATCTGCTTTTGTGGAGTGGGAAGGGTATGGATGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR TCA 90 bp ACTCAGAATGAAAGTATCGCTAAGGCCAAAGCCACCAGTCAGGGGTTCTGGATAAGTGGGGGAAGACAATaGGCAACTTCCTCAACATGG +
Preference number: 4 (lower is better)
Translates to: TQNESIAKAKATSQGFWISGGRQ*ATSSTW
Trigger: CCATGTTGAGGAAGTTGCTCATTGTCTTCCCCCACT...TATCCAGAACCCCTGACTGGTGGCTTTGGCCTTAGCGATACTTTCATTCTGAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR TCA 90 bp CACAAAAGCAGATCCACTCAGAATGAAAGTATCGCTAAGGCCAAAGCCACCAGTGGTGTTCTCTGCCTGTaGGCAGGTCATCGATTGCAT +
Preference number: 4 (lower is better)
Translates to: HKSRSTQNESIAKAKATSGVLCL*AGHRLH
Trigger: ATGCAATCGATGACCTGCTCACAGGCAGAGAACACC...ACTGGTGGCTTTGGCCTTAGCGATACTTTCATTCTGAGTGGATCTGCTTTTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR TCA 90 bp CACAAAAGCAGATCCACTCAGAATGAAAGTATCGCTAAGGCCAAAGCCACCAGTATGGTACCCAGACACTaGAAGGTGCCCTTCACCATG +
Preference number: 4 (lower is better)
Translates to: HKSRSTQNESIAKAKATSMVPRH*KVPFTM
Trigger: CATGGTGAAGGGCACCTTTCAGTGTCTGGGTACCAT...ACTGGTGGCTTTGGCCTTAGCGATACTTTCATTCTGAGTGGATCTGCTTTTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR TCA 90 bp CAGTCAGGGGTTCTGGATAAACAGGTGACCATTCTGATAGGTCAGTTTTGCCATTGTCCTTGTGGGAAATaGGCAGCTGGAAGATCCTGG +
Preference number: 4 (lower is better)
Translates to: QSGVLDKQVTILIGQFCHCPCGK*AAGRSW
Trigger: CCAGGATCTTCCAGCTGCTCATTTCCCACAAGGACA...ATGGCAAAACTGACCTATCAGAATGGTCACCTGTTTATCCAGAACCCCTGACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR GCA 90 bp ACAAAAGCAGATCCACTCAGAATGAAAGTATCGCTAAGGCCAAAGCCACCAGTCACAGCTTCCTCTGCATaGCACCTGAAAGGTCCTGAG +
Preference number: 4 (lower is better)
Translates to: TKADPLRMKVSLRPKPPVTASSA*HLKGPE
Trigger: CTCAGGACCTTTCAGGTGGCATGCAGAGGAAGCTGT...GACTGGTGGCTTTGGCCTTAGCGATACTTTCATTCTGAGTGGATCTGCTTTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000013995.13
CDS-3UTR GCA 90 bp CACACATCCATACCCTTCCCACTCCACAAAAGCAGATCCACTCAGAATGAAAGTGCTGCTGTCCATTTCTaGTTCTGGAACAGGTGGGTG +
Preference number: 4 (lower is better)
Translates to: HTSIPFPLHKSRSTQNESAAVHF*FWNRWV
Trigger: CACCCACCTGTTCCAGAAGCAGAAATGGACAGCAGC...ACTTTCATTCTGAGTGGATCTGCTTTTGTGGAGTGGGAAGGGTATGGATGTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR GCA 90 bp CCCACACATCCATACCCTTCCCACTCCACAAAAGCAGATCCACTCAGAATGAAAAAGCTGACCAGGGCATaGCAGCCCTTGTTGTTAAAC +
Preference number: 4 (lower is better)
Translates to: PTHPYPSHSTKADPLRMKKLTRA*QPLLLN
Trigger: GTTTAACAACAAGGGCTGGCATGCCCTGGTCAGCTT...TTTCATTCTGAGTGGATCTGCTTTTGTGGAGTGGGAAGGGTATGGATGTGTGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR GCA 90 bp CACAAAAGCAGATCCACTCAGAATGAAAGTATCGCTAAGGCCAAAGCCACCAGTGTGATGTCCGAGAGCTaGTCCTTGGTCAGGTTCAGA +
Preference number: 4 (lower is better)
Translates to: HKSRSTQNESIAKAKATSVMSES*SLVRFR
Trigger: TCTGAACCTGACCAAGGAGCAGCTCTCGGACATCAC...ACTGGTGGCTTTGGCCTTAGCGATACTTTCATTCTGAGTGGATCTGCTTTTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR GCA 90 bp ACACATCCATACCCTTCCCACTCCACAAAAGCAGATCCACTCAGAATGAAAGTACCTGGAACTGGAGCATaGTGTGGTGTCTCTCCCTCT +
Preference number: 4 (lower is better)
Translates to: THPYPSHSTKADPLRMKVPGTGA*CGVSPS
Trigger: AGAGGGAGAGACACCACAGCATGCTCCAGTTCCAGG...TACTTTCATTCTGAGTGGATCTGCTTTTGTGGAGTGGGAAGGGTATGGATGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR GCA 90 bp TTCCCACTCCACAAAAGCAGATCCACTCAGAATGAAAGTATCGCTAAGGCCAAACCTGGAACTGGAGCATaGTGTGGTGTCTCTCCCTCT +
Preference number: 4 (lower is better)
Translates to: FPLHKSRSTQNESIAKAKPGTGA*CGVSPS
Trigger: AGAGGGAGAGACACCACAGCATGCTCCAGTTCCAGG...TTTGGCCTTAGCGATACTTTCATTCTGAGTGGATCTGCTTTTGTGGAGTGGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR GCA 90 bp TCAGGGGTTCTGGATAAACAGGTGACCATTCTGATAGGTCAGTTTTGCCATCAGCAGTTGTTCAGATCCTaGGGGCAAAGGCTCCTGTGT +
Preference number: 4 (lower is better)
Translates to: SGVLDKQVTILIGQFCHQQLFRS*GQRLLC
Trigger: ACACAGGAGCCTTTGCCCGCAGGATCTGAACAACTG...CTGATGGCAAAACTGACCTATCAGAATGGTCACCTGTTTATCCAGAACCCCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR CCA 90 bp CCACTCAGAATGAAAGTATCGCTAAGGCCAAAGCCACCAGTCAGGGGTTCTGGACCCTCCAGGCTATTTTaGTTAAAGGGTTTGACTCCA +
Preference number: 4 (lower is better)
Translates to: PLRMKVSLRPKPPVRGSGPSRLF*LKGLTP
Trigger: TGGAGTCAAACCCTTTAACCAAAATAGCCTGGAGGG...TCCAGAACCCCTGACTGGTGGCTTTGGCCTTAGCGATACTTTCATTCTGAGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000013995.13
CDS-3UTR CCA 90 bp CACAAAAGCAGATCCACTCAGAATGAAAGTATCGCTAAGGCCAAAGCCACCAGTAGAGACAGGGCTCGTTaGGTGAGCTGCACTTCATCA +
Preference number: 4 (lower is better)
Translates to: HKSRSTQNESIAKAKATSRDRAR*VSCTSS
Trigger: TGATGAAGTGCAGCTCACCCAACGAGCCCTGTCTCT...ACTGGTGGCTTTGGCCTTAGCGATACTTTCATTCTGAGTGGATCTGCTTTTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000013995.13
CDS-3UTR CCA 90 bp CCACTCAGAATGAAAGTATCGCTAAGGCCAAAGCCACCAGTCAGGGGTTCTGGAGCATTAGAGACGCCTTaGTTTTTCAAGGTCTCCTTC +
Preference number: 4 (lower is better)
Translates to: PLRMKVSLRPKPPVRGSGALETP*FFKVSF
Trigger: GAAGGAGACCTTGAAAAACCAAGGCGTCTCTAATGC...TCCAGAACCCCTGACTGGTGGCTTTGGCCTTAGCGATACTTTCATTCTGAGTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000013995.13
CDS-3UTR CCA 90 bp CCCACACATCCATACCCTTCCCACTCCACAAAAGCAGATCCACTCAGAATGAAAGAGCCCTTTCTTCTCTaGTCGAACAACCTTCACCAC +
Preference number: 4 (lower is better)
Translates to: PTHPYPSHSTKADPLRMKEPFLL*SNNLHH
Trigger: GTGGTGAAGGTTGTTCGACCAGAGAAGAAAGGGCTC...TTTCATTCTGAGTGGATCTGCTTTTGTGGAGTGGGAAGGGTATGGATGTGTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000013995.13
CDS-3UTR CCA 90 bp CACACATCCATACCCTTCCCACTCCACAAAAGCAGATCCACTCAGAATGAAAGTTCCTTCTGGGTGCTCTaGATCCTCCATCTCCTCTGT +
Preference number: 4 (lower is better)
Translates to: HTSIPFPLHKSRSTQNESSFWVL*ILHLLC
Trigger: ACAGAGGAGATGGAGGATCCAGAGCACCCAGAAGGA...ACTTTCATTCTGAGTGGATCTGCTTTTGTGGAGTGGGAAGGGTATGGATGTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000013995.13
CDS-3UTR CCA 90 bp AGCCACCAGTCAGGGGTTCTGGATAAACAGGTGACCATTCTGATAGGTCAGTTTCACCAGCTTTGCCTCTaGGACATGGTGGTATACCAA +
Preference number: 4 (lower is better)
Translates to: SHQSGVLDKQVTILIGQFHQLCL*DMVVYQ
Trigger: TTGGTATACCACCATGTCCCAGAGGCAAAGCTGGTG...AAACTGACCTATCAGAATGGTCACCTGTTTATCCAGAACCCCTGACTGGTGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR CCA 90 bp TTCCCACTCCACAAAAGCAGATCCACTCAGAATGAAAGTATCGCTAAGGCCAAAGGCTGGCCCGTAAGATaGCGTTGTGAGCCACATTCA +
Preference number: 4 (lower is better)
Translates to: FPLHKSRSTQNESIAKAKGWPVR*RCEPHS
Trigger: TGAATGTGGCTCACAACGCCATCTTACGGGCCAGCC...TTTGGCCTTAGCGATACTTTCATTCTGAGTGGATCTGCTTTTGTGGAGTGGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR CCA 90 bp CCCACACATCCATACCCTTCCCACTCCACAAAAGCAGATCCACTCAGAATGAAAGTCAGGTTCAGAGGCTaGCTGATGACAGTGATTCCA +
Preference number: 4 (lower is better)
Translates to: PTHPYPSHSTKADPLRMKVRFRG*LMTVIP
Trigger: TGGAATCACTGTCATCAGCCAGCCTCTGAACCTGAC...TTTCATTCTGAGTGGATCTGCTTTTGTGGAGTGGGAAGGGTATGGATGTGTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR CCA 90 bp TACCCTTCCCACTCCACAAAAGCAGATCCACTCAGAATGAAAGTATCGCTAAGGCAGGTCCCACTGGAATaGGTTTGCAGAGTACTCCTC +
Preference number: 4 (lower is better)
Translates to: YPSHSTKADPLRMKVSLRQVPLE*VCRVLL
Trigger: GAGGAGTACTCTGCAAACCCATTCCAGTGGGACCTG...CCTTAGCGATACTTTCATTCTGAGTGGATCTGCTTTTGTGGAGTGGGAAGGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR CCA 90 bp CACAAAAGCAGATCCACTCAGAATGAAAGTATCGCTAAGGCCAAAGCCACCAGTCAGGTCCCACTGGAATaGGTTTGCAGAGTACTCCTC +
Preference number: 4 (lower is better)
Translates to: HKSRSTQNESIAKAKATSQVPLE*VCRVLL
Trigger: GAGGAGTACTCTGCAAACCCATTCCAGTGGGACCTG...ACTGGTGGCTTTGGCCTTAGCGATACTTTCATTCTGAGTGGATCTGCTTTTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR TCA 90 bp GTCAGTTTTGCCATCAGGAGTTCCGGTGAGCCAGTGAATTTTGGTTTCTTTCTGCCTCCGGGGTGTCCATaGAGAGTTCTTGAAAATCTC +
Preference number: 4 (lower is better)
Translates to: VSFAIRSSGEPVNFGFFLPPGCP*RVLENL
Trigger: GAGATTTTCAAGAACTCTTCATGGACACCCCGGAGG...CAGAAAGAAACCAAAATTCACTGGCTCACCGGAACTCCTGATGGCAAAACTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000013995.13
CDS-3UTR TCA 90 bp CAGAATGAAAGTATCGCTAAGGCCAAAGCCACCAGTCAGGGGTTCTGGATAAACACCCATAGCAAGTCTTaGACACTTGGCCGATGGATA +
Preference number: 4 (lower is better)
Translates to: QNESIAKAKATSQGFWINTHSKS*TLGRWI
Trigger: TATCCATCGGCCAAGTGTTCAAGACTTGCTATGGGT...GTTTATCCAGAACCCCTGACTGGTGGCTTTGGCCTTAGCGATACTTTCATTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000013995.13
CDS-3UTR TCA 90 bp CCCACACATCCATACCCTTCCCACTCCACAAAAGCAGATCCACTCAGAATGAAAGGTTCTCATAGAAAGTaGTGTTCAGACGGTCCACAG +
Preference number: 4 (lower is better)
Translates to: PTHPYPSHSTKADPLRMKGSHRK*CSDGPQ
Trigger: CTGTGGACCGTCTGAACATCACTTTCTATGAGAACC...TTTCATTCTGAGTGGATCTGCTTTTGTGGAGTGGGAAGGGTATGGATGTGTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000013995.13
CDS-3UTR TCA 90 bp ACTCAGAATGAAAGTATCGCTAAGGCCAAAGCCACCAGTCAGGGGTTCTGGATACTCCAGCATCCTCTGTaGCCTTCAGGAAAATCTCTT +
Preference number: 4 (lower is better)
Translates to: TQNESIAKAKATSQGFWILQHPL*PSGKSL
Trigger: AAGAGATTTTCCTGAAGGTCACAGAGGATGCTGGAG...TATCCAGAACCCCTGACTGGTGGCTTTGGCCTTAGCGATACTTTCATTCTGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR TCA 90 bp CTCCACAAAAGCAGATCCACTCAGAATGAAAGTATCGCTAAGGCCAAAGCCACCCGGAGGCACAATGATTaGAAGCATCAGAGCCAAGAA +
Preference number: 4 (lower is better)
Translates to: LHKSRSTQNESIAKAKATRRHND*KHQSQE
Trigger: TTCTTGGCTCTGATGCTTTCAATCATTGTGCCTCCG...GGTGGCTTTGGCCTTAGCGATACTTTCATTCTGAGTGGATCTGCTTTTGTGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR TCA 90 bp TCAGGGGTTCTGGATAAACAGGTGACCATTCTGATAGGTCAGTTTTGCCATCAGCGTAAGATGGCGTTGTaGGCCACATTCAGAAAGCTG +
Preference number: 4 (lower is better)
Translates to: SGVLDKQVTILIGQFCHQRKMAL*ATFRKL
Trigger: CAGCTTTCTGAATGTGGCTCACAACGCCATCTTACG...CTGATGGCAAAACTGACCTATCAGAATGGTCACCTGTTTATCCAGAACCCCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR TCA 90 bp ACAAAAGCAGATCCACTCAGAATGAAAGTATCGCTAAGGCCAAAGCCACCAGTCCGTAAGATGGCGTTGTaGGCCACATTCAGAAAGCTG +
Preference number: 4 (lower is better)
Translates to: TKADPLRMKVSLRPKPPVRKMAL*ATFRKL
Trigger: CAGCTTTCTGAATGTGGCTCACAACGCCATCTTACG...GACTGGTGGCTTTGGCCTTAGCGATACTTTCATTCTGAGTGGATCTGCTTTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR TCA 90 bp ACCCACACATCCATACCCTTCCCACTCCACAAAAGCAGATCCACTCAGAATGAACTCCAAACTTGTACTTaGGGTGTTGGATGGTACCCA +
Preference number: 4 (lower is better)
Translates to: THTSIPFPLHKSRSTQNELQTCT*GVGWYP
Trigger: TGGGTACCATCCAACACCTCAAGTACAAGTTTGGAG...TTCATTCTGAGTGGATCTGCTTTTGTGGAGTGGGAAGGGTATGGATGTGTGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR GCA 90 bp CAGTCAGGGGTTCTGGATAAACAGGTGACCATTCTGATAGGTCAGTTTTGCCATTCCAATTGGAGGCTCTaGCTGCATCTGACTCTTCAC +
Preference number: 4 (lower is better)
Translates to: QSGVLDKQVTILIGQFCHSNWRL*LHLTLH
Trigger: GTGAAGAGTCAGATGCAGGCAGAGCCTCCAATTGGA...ATGGCAAAACTGACCTATCAGAATGGTCACCTGTTTATCCAGAACCCCTGACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000013995.13
CDS-3UTR GCA 90 bp AAAGCAGATCCACTCAGAATGAAAGTATCGCTAAGGCCAAAGCCACCAGTCAGGAAATCCATCAGCTCCTaGACATCTCCATCCAGGACT +
Preference number: 4 (lower is better)
Translates to: KADPLRMKVSLRPKPPVRKSISS*TSPSRT
Trigger: AGTCCTGGATGGAGATGTGCAGGAGCTGATGGATTT...CCTGACTGGTGGCTTTGGCCTTAGCGATACTTTCATTCTGAGTGGATCTGCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000013995.13
CDS-3UTR GCA 90 bp TTCCCACTCCACAAAAGCAGATCCACTCAGAATGAAAGTATCGCTAAGGCCAAAGCATTCCACCAGCTTTaGCTCTGGGACATGGTGGTA +
Preference number: 4 (lower is better)
Translates to: FPLHKSRSTQNESIAKAKAFHQL*LWDMVV
Trigger: TACCACCATGTCCCAGAGGCAAAGCTGGTGGAATGC...TTTGGCCTTAGCGATACTTTCATTCTGAGTGGATCTGCTTTTGTGGAGTGGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR GCA 90 bp ACAAAAGCAGATCCACTCAGAATGAAAGTATCGCTAAGGCCAAAGCCACCAGTCAAGCTGACCAGGGCATaGCAGCCCTTGTTGTTAAAC +
Preference number: 4 (lower is better)
Translates to: TKADPLRMKVSLRPKPPVKLTRA*QPLLLN
Trigger: GTTTAACAACAAGGGCTGGCATGCCCTGGTCAGCTT...GACTGGTGGCTTTGGCCTTAGCGATACTTTCATTCTGAGTGGATCTGCTTTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR GCA 90 bp ACACATCCATACCCTTCCCACTCCACAAAAGCAGATCCACTCAGAATGAAAGTAGTGATGTCCGAGAGCTaGTCCTTGGTCAGGTTCAGA +
Preference number: 4 (lower is better)
Translates to: THPYPSHSTKADPLRMKVVMSES*SLVRFR
Trigger: TCTGAACCTGACCAAGGAGCAGCTCTCGGACATCAC...TACTTTCATTCTGAGTGGATCTGCTTTTGTGGAGTGGGAAGGGTATGGATGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR GCA 90 bp TACCCTTCCCACTCCACAAAAGCAGATCCACTCAGAATGAAAGTATCGCTAAGGAAGCCACATAGGCTGTaGTGGGGACTTCAAACAGGA +
Preference number: 4 (lower is better)
Translates to: YPSHSTKADPLRMKVSLRKPHRL*WGLQTG
Trigger: TCCTGTTTGAAGTCCCCAGCACAGCCTATGTGGCTT...CCTTAGCGATACTTTCATTCTGAGTGGATCTGCTTTTGTGGAGTGGGAAGGGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR GCA 90 bp CTCCACAAAAGCAGATCCACTCAGAATGAAAGTATCGCTAAGGCCAAAGCCACCCCACTGGAATGGGTTTaGAGAGTACTCCTCACCAAA +
Preference number: 4 (lower is better)
Translates to: LHKSRSTQNESIAKAKATPLEWV*RVLLTK
Trigger: TTTGGTGAGGAGTACTCTGCAAACCCATTCCAGTGG...GGTGGCTTTGGCCTTAGCGATACTTTCATTCTGAGTGGATCTGCTTTTGTGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR GCA 90 bp TTCCCACTCCACAAAAGCAGATCCACTCAGAATGAAAGTATCGCTAAGGCCAAATGTGGTGGTTTTGCCTaGACCATTCACTCCCAGGAG +
Preference number: 4 (lower is better)
Translates to: FPLHKSRSTQNESIAKAKCGGFA*TIHSQE
Trigger: CTCCTGGGAGTGAATGGTGCAGGCAAAACCACCACA...TTTGGCCTTAGCGATACTTTCATTCTGAGTGGATCTGCTTTTGTGGAGTGGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR GCA 90 bp CTCCACAAAAGCAGATCCACTCAGAATGAAAGTATCGCTAAGGCCAAAGCCACCAGAGTTTCCTCTTATTaGCTCCACTGTAGGTGCCTG +
Preference number: 4 (lower is better)
Translates to: LHKSRSTQNESIAKAKATRVSSY*LHCRCL
Trigger: CAGGCACCTACAGTGGAGGCAATAAGAGGAAACTCT...GGTGGCTTTGGCCTTAGCGATACTTTCATTCTGAGTGGATCTGCTTTTGTGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR CCA 90 bp CCCACACATCCATACCCTTCCCACTCCACAAAAGCAGATCCACTCAGAATGAAAATGCTGACTATAGAGTaGGTTGGCATTCCTCAGCCA +
Preference number: 4 (lower is better)
Translates to: PTHPYPSHSTKADPLRMKMLTIE*VGIPQP
Trigger: TGGCTGAGGAATGCCAACCCACTCTATAGTCAGCAT...TTTCATTCTGAGTGGATCTGCTTTTGTGGAGTGGGAAGGGTATGGATGTGTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000013995.13
CDS-3UTR CCA 90 bp GTCAGTTTTGCCATCAGGAGTTCCGGTGAGCCAGTGAATTTTGGTTTCTTTCTGTTGCAGAAAATCCCCTaGAGCCACGGTAACAGTCCT +
Preference number: 4 (lower is better)
Translates to: VSFAIRSSGEPVNFGFFLLQKIP*SHGNSP
Trigger: AGGACTGTTACCGTGGCTCCAGGGGATTTTCTGCAA...CAGAAAGAAACCAAAATTCACTGGCTCACCGGAACTCCTGATGGCAAAACTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000013995.13
CDS-3UTR CCA 90 bp ACACATCCATACCCTTCCCACTCCACAAAAGCAGATCCACTCAGAATGAAAGTAGAGTTGACCAGAAGATaGGCAACCGAGTCAGACAGG +
Preference number: 4 (lower is better)
Translates to: THPYPSHSTKADPLRMKVELTRR*ATESDR
Trigger: CCTGTCTGACTCGGTTGCCCATCTTCTGGTCAACTC...TACTTTCATTCTGAGTGGATCTGCTTTTGTGGAGTGGGAAGGGTATGGATGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000013995.13
CDS-3UTR CCA 90 bp ACTCAGAATGAAAGTATCGCTAAGGCCAAAGCCACCAGTCAGGGGTTCTGGATAAGTGTGGGGAGCACATaGAAGAGTTTGAAGAAGTCC +
Preference number: 4 (lower is better)
Translates to: TQNESIAKAKATSQGFWISVGST*KSLKKS
Trigger: GGACTTCTTCAAACTCTTCCATGTGCTCCCCACACT...TATCCAGAACCCCTGACTGGTGGCTTTGGCCTTAGCGATACTTTCATTCTGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000013995.13
CDS-3UTR CCA 90 bp ACAAAAGCAGATCCACTCAGAATGAAAGTATCGCTAAGGCCAAAGCCACCAGTCAGGCTGCTGCAAGGCTaGCCTTGGAAAACAAAGTAC +
Preference number: 4 (lower is better)
Translates to: TKADPLRMKVSLRPKPPVRLLQG*PWKTKY
Trigger: GTACTTTGTTTTCCAAGGCCAGCCTTGCAGCAGCCT...GACTGGTGGCTTTGGCCTTAGCGATACTTTCATTCTGAGTGGATCTGCTTTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000013995.13
CDS-3UTR CCA 90 bp TTCCCACTCCACAAAAGCAGATCCACTCAGAATGAAAGTATCGCTAAGGCCAAACCGTGTCTTCTAGCATaGCTTCCATCTCAAGCTGGG +
Preference number: 4 (lower is better)
Translates to: FPLHKSRSTQNESIAKAKPCLLA*LPSQAG
Trigger: CCCAGCTTGAGATGGAAGCCATGCTAGAAGACACGG...TTTGGCCTTAGCGATACTTTCATTCTGAGTGGATCTGCTTTTGTGGAGTGGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000013995.13
CDS-3UTR CCA 90 bp TCAGGGGTTCTGGATAAACAGGTGACCATTCTGATAGGTCAGTTTTGCCATCAGTCATTCCTCTTATGGTaGAGGCCCGTGTCTTCTAGC +
Preference number: 4 (lower is better)
Translates to: SGVLDKQVTILIGQFCHQSFLLW*RPVSSS
Trigger: GCTAGAAGACACGGGCCTCCACCATAAGAGGAATGA...CTGATGGCAAAACTGACCTATCAGAATGGTCACCTGTTTATCCAGAACCCCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000013995.13
CDS-3UTR CCA 90 bp CAGTCAGGGGTTCTGGATAAACAGGTGACCATTCTGATAGGTCAGTTTTGCCATCACCAGCTTTGCCTCTaGGACATGGTGGTATACCAA +
Preference number: 4 (lower is better)
Translates to: QSGVLDKQVTILIGQFCHHQLCL*DMVVYQ
Trigger: TTGGTATACCACCATGTCCCAGAGGCAAAGCTGGTG...ATGGCAAAACTGACCTATCAGAATGGTCACCTGTTTATCCAGAACCCCTGACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR CCA 90 bp CTCCACAAAAGCAGATCCACTCAGAATGAAAGTATCGCTAAGGCCAAAGCCACCGTCCATTTCTGCTTCTaGAACAGGTGGGTGATGTTC +
Preference number: 4 (lower is better)
Translates to: LHKSRSTQNESIAKAKATVHFCF*NRWVMF
Trigger: GAACATCACCCACCTGTTCCAGAAGCAGAAATGGAC...GGTGGCTTTGGCCTTAGCGATACTTTCATTCTGAGTGGATCTGCTTTTGTGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR CCA 90 bp ACCCACACATCCATACCCTTCCCACTCCACAAAAGCAGATCCACTCAGAATGAACTCACGTTCATCATCTaGCCAAGGCCACTTAGAAAG +
Preference number: 4 (lower is better)
Translates to: THTSIPFPLHKSRSTQNELTFII*PRPLRK
Trigger: CTTTCTAAGTGGCCTTGGCCAGATGATGAACGTGAG...TTCATTCTGAGTGGATCTGCTTTTGTGGAGTGGGAAGGGTATGGATGTGTGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR CCA 90 bp ACAAAAGCAGATCCACTCAGAATGAAAGTATCGCTAAGGCCAAAGCCACCAGTCGTCAGGTTCAGAGGCTaGCTGATGACAGTGATTCCA +
Preference number: 4 (lower is better)
Translates to: TKADPLRMKVSLRPKPPVVRFRG*LMTVIP
Trigger: TGGAATCACTGTCATCAGCCAGCCTCTGAACCTGAC...GACTGGTGGCTTTGGCCTTAGCGATACTTTCATTCTGAGTGGATCTGCTTTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR CCA 90 bp TACCCTTCCCACTCCACAAAAGCAGATCCACTCAGAATGAAAGTATCGCTAAGGCGAAAATCACACATATaGCAACCACGGCATCCACGG +
Preference number: 4 (lower is better)
Translates to: YPSHSTKADPLRMKVSLRRKSHI*QPRHPR
Trigger: CCGTGGATGCCGTGGTTGCCATATGTGTGATTTTCG...CCTTAGCGATACTTTCATTCTGAGTGGATCTGCTTTTGTGGAGTGGGAAGGGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR CCA 90 bp GTTCTGGATAAACAGGTGACCATTCTGATAGGTCAGTTTTGCCATCAGGAGTTCCCACATAGGCTGTGCTaGGGACTTCAAACAGGAAGG +
Preference number: 4 (lower is better)
Translates to: VLDKQVTILIGQFCHQEFPHRLC*GLQTGR
Trigger: CCTTCCTGTTTGAAGTCCCCAGCACAGCCTATGTGG...GAACTCCTGATGGCAAAACTGACCTATCAGAATGGTCACCTGTTTATCCAGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR CCA 90 bp TCAGGGGTTCTGGATAAACAGGTGACCATTCTGATAGGTCAGTTTTGCCATCAGCCAATCAGGTCCCACTaGAATGGGTTTGCAGAGTAC +
Preference number: 4 (lower is better)
Translates to: SGVLDKQVTILIGQFCHQPIRSH*NGFAEY
Trigger: GTACTCTGCAAACCCATTCCAGTGGGACCTGATTGG...CTGATGGCAAAACTGACCTATCAGAATGGTCACCTGTTTATCCAGAACCCCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR CCA 90 bp GTCAGTTTTGCCATCAGGAGTTCCGGTGAGCCAGTGAATTTTGGTTTCTTTCTGCATTCTTCCATGCTGTaGGAGGTGAGAACCACAGCT +
Preference number: 4 (lower is better)
Translates to: VSFAIRSSGEPVNFGFFLHSSML*EVRTTA
Trigger: AGCTGTGGTTCTCACCTCCCACAGCATGGAAGAATG...CAGAAAGAAACCAAAATTCACTGGCTCACCGGAACTCCTGATGGCAAAACTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR CCA 90 bp TCAGGGGTTCTGGATAAACAGGTGACCATTCTGATAGGTCAGTTTTGCCATCAGATTTCTCTTCAAGCTTaGCTTGCCAGCTGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: SGVLDKQVTILIGQFCHQISLQA*LASWLQ
Trigger: CTGGAGCCAGCTGGCAAGCCAAGCTTGAAGAGAAAT...CTGATGGCAAAACTGACCTATCAGAATGGTCACCTGTTTATCCAGAACCCCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR CCA 90 bp GTCAGTTTTGCCATCAGGAGTTCCGGTGAGCCAGTGAATTTTGGTTTCTTTCTGATTTCTCTTCAAGCTTaGCTTGCCAGCTGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: VSFAIRSSGEPVNFGFFLISLQA*LASWLQ
Trigger: CTGGAGCCAGCTGGCAAGCCAAGCTTGAAGAGAAAT...CAGAAAGAAACCAAAATTCACTGGCTCACCGGAACTCCTGATGGCAAAACTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR TCA 90 bp TCAGGGGTTCTGGATAAACAGGTGACCATTCTGATAGGTCAGTTTTGCCATCAGGCACATGGAAGAGTTTaGAGAAGTCCACATCGGCAT +
Preference number: 4 (lower is better)
Translates to: SGVLDKQVTILIGQFCHQAHGRV*RSPHRH
Trigger: ATGCCGATGTGGACTTCTTCAAACTCTTCCATGTGC...CTGATGGCAAAACTGACCTATCAGAATGGTCACCTGTTTATCCAGAACCCCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000013995.13
CDS-3UTR TCA 90 bp CTCCACAAAAGCAGATCCACTCAGAATGAAAGTATCGCTAAGGCCAAAGCCACCAGAACAGGAAGAGAATaGAGGGATCGCTGTAATGGA +
Preference number: 4 (lower is better)
Translates to: LHKSRSTQNESIAKAKATRTGRE*RDRCNG
Trigger: TCCATTACAGCGATCCCTTCATTCTCTTCCTGTTCT...GGTGGCTTTGGCCTTAGCGATACTTTCATTCTGAGTGGATCTGCTTTTGTGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000013995.13
CDS-3UTR TCA 90 bp CACACATCCATACCCTTCCCACTCCACAAAAGCAGATCCACTCAGAATGAAAGTCCACCTGAAAGGTCCTaGGCTTCTTCATTCCTCTTA +
Preference number: 4 (lower is better)
Translates to: HTSIPFPLHKSRSTQNESPPERS*ASSFLL
Trigger: TAAGAGGAATGAAGAAGCTCAGGACCTTTCAGGTGG...ACTTTCATTCTGAGTGGATCTGCTTTTGTGGAGTGGGAAGGGTATGGATGTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000013995.13
CDS-3UTR TCA 90 bp ACCCACACATCCATACCCTTCCCACTCCACAAAAGCAGATCCACTCAGAATGAAAGGAAGATAAGTTCTTaGCCAATGCATTCCACCAGC +
Preference number: 4 (lower is better)
Translates to: THTSIPFPLHKSRSTQNERKISS*PMHSTS
Trigger: GCTGGTGGAATGCATTGGTCAAGAACTTATCTTCCT...TTCATTCTGAGTGGATCTGCTTTTGTGGAGTGGGAAGGGTATGGATGTGTGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR TCA 90 bp TACCCTTCCCACTCCACAAAAGCAGATCCACTCAGAATGAAAGTATCGCTAAGGCTCCAGCATCCTCTGTaGCCTTCAGGAAAATCTCTT +
Preference number: 4 (lower is better)
Translates to: YPSHSTKADPLRMKVSLRLQHPL*PSGKSL
Trigger: AAGAGATTTTCCTGAAGGTCACAGAGGATGCTGGAG...CCTTAGCGATACTTTCATTCTGAGTGGATCTGCTTTTGTGGAGTGGGAAGGGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR TCA 90 bp CAGAATGAAAGTATCGCTAAGGCCAAAGCCACCAGTCAGGGGTTCTGGATAAACTGTTCTCTTTTCTGCTaGGCGCCACCTACAAACATA +
Preference number: 4 (lower is better)
Translates to: QNESIAKAKATSQGFWINCSLFC*APPTNI
Trigger: TATGTTTGTAGGTGGCGCTCAGCAGAAAAGAGAACA...GTTTATCCAGAACCCCTGACTGGTGGCTTTGGCCTTAGCGATACTTTCATTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR TCA 90 bp AGCCACCAGTCAGGGGTTCTGGATAAACAGGTGACCATTCTGATAGGTCAGTTTCTGAAGAAGGTATATTaGTGCCCATACATCCAGGGA +
Preference number: 4 (lower is better)
Translates to: SHQSGVLDKQVTILIGQFLKKVY*CPYIQG
Trigger: TCCCTGGATGTATGGGCATCAATATACCTTCTTCAG...AAACTGACCTATCAGAATGGTCACCTGTTTATCCAGAACCCCTGACTGGTGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR TCA 90 bp CAGTCAGGGGTTCTGGATAAACAGGTGACCATTCTGATAGGTCAGTTTTGCCATAGATGTTCCTGTTCGTaGGGTCTTGTAGGACTTCAG +
Preference number: 4 (lower is better)
Translates to: QSGVLDKQVTILIGQFCHRCSCS*GLVGLQ
Trigger: CTGAAGTCCTACAAGACCTCACGAACAGGAACATCT...ATGGCAAAACTGACCTATCAGAATGGTCACCTGTTTATCCAGAACCCCTGACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR TCA 90 bp GTTCTGGATAAACAGGTGACCATTCTGATAGGTCAGTTTTGCCATCAGGAGTTCAGTGGGGGAAGACAATaGGCAACTTCCTCAACATGG +
Preference number: 4 (lower is better)
Translates to: VLDKQVTILIGQFCHQEFSGGRQ*ATSSTW
Trigger: CCATGTTGAGGAAGTTGCTCATTGTCTTCCCCCACT...GAACTCCTGATGGCAAAACTGACCTATCAGAATGGTCACCTGTTTATCCAGAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR TCA 90 bp AAAGCAGATCCACTCAGAATGAAAGTATCGCTAAGGCCAAAGCCACCAGTCAGGAAAAATGGTGTTGGATaGGCAGGGTCAGAAGGAAGT +
Preference number: 4 (lower is better)
Translates to: KADPLRMKVSLRPKPPVRKNGVG*AGSEGS
Trigger: ACTTCCTTCTGACCCTGCTCATCCAACACCATTTTT...CCTGACTGGTGGCTTTGGCCTTAGCGATACTTTCATTCTGAGTGGATCTGCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR TCA 90 bp ACTCAGAATGAAAGTATCGCTAAGGCCAAAGCCACCAGTCAGGGGTTCTGGATAAAAAATGGTGTTGGATaGGCAGGGTCAGAAGGAAGT +
Preference number: 4 (lower is better)
Translates to: TQNESIAKAKATSQGFWIKNGVG*AGSEGS
Trigger: ACTTCCTTCTGACCCTGCTCATCCAACACCATTTTT...TATCCAGAACCCCTGACTGGTGGCTTTGGCCTTAGCGATACTTTCATTCTGAGT
47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR TCA 90 bp TACCCTTCCCACTCCACAAAAGCAGATCCACTCAGAATGAAAGTATCGCTAAGGCTCCAAACTTGTACTTaGGGTGTTGGATGGTACCCA +
Preference number: 4 (lower is better)
Translates to: YPSHSTKADPLRMKVSLRLQTCT*GVGWYP
Trigger: TGGGTACCATCCAACACCTCAAGTACAAGTTTGGAG...CCTTAGCGATACTTTCATTCTGAGTGGATCTGCTTTTGTGGAGTGGGAAGGGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR GCA 90 bp AAAGCAGATCCACTCAGAATGAAAGTATCGCTAAGGCCAAAGCCACCAGTCAGGAAGGGTTGTTCATATTaGAGAAAATCCCCTGGAGCC +
Preference number: 4 (lower is better)
Translates to: KADPLRMKVSLRPKPPVRKGCSY*RKSPGA
Trigger: GGCTCCAGGGGATTTTCTGCAATATGAACAACCCTT...CCTGACTGGTGGCTTTGGCCTTAGCGATACTTTCATTCTGAGTGGATCTGCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000013995.13
CDS-3UTR GCA 90 bp AGCCACCAGTCAGGGGTTCTGGATAAACAGGTGACCATTCTGATAGGTCAGTTTTCACGGTCATCTGTGTaGTCTTCTCAAAGAAGTACC +
Preference number: 4 (lower is better)
Translates to: SHQSGVLDKQVTILIGQFSRSSV*SSQRST
Trigger: GGTACTTCTTTGAGAAGAGCACACAGATGACCGTGA...AAACTGACCTATCAGAATGGTCACCTGTTTATCCAGAACCCCTGACTGGTGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000013995.13
CDS-3UTR GCA 90 bp CAGAATGAAAGTATCGCTAAGGCCAAAGCCACCAGTCAGGGGTTCTGGATAAACGTTCAGAAGGACATCTaGCAGTACTTCAAGGTGTTC +
Preference number: 4 (lower is better)
Translates to: QNESIAKAKATSQGFWINVQKDI*QYFKVF
Trigger: GAACACCTTGAAGTACTGGCAGATGTCCTTCTGAAC...GTTTATCCAGAACCCCTGACTGGTGGCTTTGGCCTTAGCGATACTTTCATTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR GCA 90 bp CCCACACATCCATACCCTTCCCACTCCACAAAAGCAGATCCACTCAGAATGAAACATCATAGGAATGACTaGCCATCCATACAGCATGAG +
Preference number: 4 (lower is better)
Translates to: PTHPYPSHSTKADPLRMKHHRND*PSIQHE
Trigger: CTCATGCTGTATGGATGGGCAGTCATTCCTATGATG...TTTCATTCTGAGTGGATCTGCTTTTGTGGAGTGGGAAGGGTATGGATGTGTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR GCA 90 bp CTCCACAAAAGCAGATCCACTCAGAATGAAAGTATCGCTAAGGCCAAAGCCACCCATCATAGGAATGACTaGCCATCCATACAGCATGAG +
Preference number: 4 (lower is better)
Translates to: LHKSRSTQNESIAKAKATHHRND*PSIQHE
Trigger: CTCATGCTGTATGGATGGGCAGTCATTCCTATGATG...GGTGGCTTTGGCCTTAGCGATACTTTCATTCTGAGTGGATCTGCTTTTGTGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR GCA 90 bp ACAAAAGCAGATCCACTCAGAATGAAAGTATCGCTAAGGCCAAAGCCACCAGTCCCACTGGAATGGGTTTaGAGAGTACTCCTCACCAAA +
Preference number: 4 (lower is better)
Translates to: TKADPLRMKVSLRPKPPVPLEWV*RVLLTK
Trigger: TTTGGTGAGGAGTACTCTGCAAACCCATTCCAGTGG...GACTGGTGGCTTTGGCCTTAGCGATACTTTCATTCTGAGTGGATCTGCTTTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR GCA 90 bp CACAAAAGCAGATCCACTCAGAATGAAAGTATCGCTAAGGCCAAAGCCACCAGTTTGCCCTGGAAGAACTaGTCCACAGGATTCAAATCG +
Preference number: 4 (lower is better)
Translates to: HKSRSTQNESIAKAKATSLPWKN*STGFKS
Trigger: CGATTTGAATCCTGTGGAGCAGTTCTTCCAGGGCAA...ACTGGTGGCTTTGGCCTTAGCGATACTTTCATTCTGAGTGGATCTGCTTTTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR CCA 90 bp CTCCACAAAAGCAGATCCACTCAGAATGAAAGTATCGCTAAGGCCAAAGCCACCGACTATAGAGTGGGTTaGCATTCCTCAGCCAGATTA +
Preference number: 4 (lower is better)
Translates to: LHKSRSTQNESIAKAKATDYRVG*HSSARL
Trigger: TAATCTGGCTGAGGAATGCCAACCCACTCTATAGTC...GGTGGCTTTGGCCTTAGCGATACTTTCATTCTGAGTGGATCTGCTTTTGTGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000013995.13
CDS-3UTR CCA 90 bp CCCACACATCCATACCCTTCCCACTCCACAAAAGCAGATCCACTCAGAATGAAAAAGGCATCGCCTTGTTaGGAAAATGGCATTCATGCT +
Preference number: 4 (lower is better)
Translates to: PTHPYPSHSTKADPLRMKKASPC*ENGIHA
Trigger: AGCATGAATGCCATTTTCCCAACAAGGCGATGCCTT...TTTCATTCTGAGTGGATCTGCTTTTGTGGAGTGGGAAGGGTATGGATGTGTGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000013995.13
CDS-3UTR CCA 90 bp TACCCTTCCCACTCCACAAAAGCAGATCCACTCAGAATGAAAGTATCGCTAAGGTCTCCTGGGAAAACCTaGTCAAGATACCAAGCAAGC +
Preference number: 4 (lower is better)
Translates to: YPSHSTKADPLRMKVSLRSPGKT*SRYQAS
Trigger: GCTTGCTTGGTATCTTGACCAGGTTTTCCCAGGAGA...CCTTAGCGATACTTTCATTCTGAGTGGATCTGCTTTTGTGGAGTGGGAAGGGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000013995.13
CDS-3UTR CCA 90 bp CACAAAAGCAGATCCACTCAGAATGAAAGTATCGCTAAGGCCAAAGCCACCAGTGGTCCCATAGTCTCCTaGGAAAACCTGGTCAAGATA +
Preference number: 4 (lower is better)
Translates to: HKSRSTQNESIAKAKATSGPIVS*ENLVKI
Trigger: TATCTTGACCAGGTTTTCCCAGGAGACTATGGGACC...ACTGGTGGCTTTGGCCTTAGCGATACTTTCATTCTGAGTGGATCTGCTTTTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000013995.13
CDS-3UTR CCA 90 bp CACACATCCATACCCTTCCCACTCCACAAAAGCAGATCCACTCAGAATGAAAGTGTCATTCATTCCTTCTaGGTGCTCTGGATCCTCCAT +
Preference number: 4 (lower is better)
Translates to: HTSIPFPLHKSRSTQNESVIHSF*VLWILH
Trigger: ATGGAGGATCCAGAGCACCCAGAAGGAATGAATGAC...ACTTTCATTCTGAGTGGATCTGCTTTTGTGGAGTGGGAAGGGTATGGATGTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000013995.13
CDS-3UTR CCA 90 bp ACTCAGAATGAAAGTATCGCTAAGGCCAAAGCCACCAGTCAGGGGTTCTGGATATCACAGCCACCTCTTTaGCTCTGGATGTTTTTCATC +
Preference number: 4 (lower is better)
Translates to: TQNESIAKAKATSQGFWISQPPL*LWMFFI
Trigger: GATGAAAAACATCCAGAGCCAAAGAGGTGGCTGTGA...TATCCAGAACCCCTGACTGGTGGCTTTGGCCTTAGCGATACTTTCATTCTGAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000013995.13
CDS-3UTR CCA 90 bp CAGTCAGGGGTTCTGGATAAACAGGTGACCATTCTGATAGGTCAGTTTTGCCATGTCCATTTCTGCTTCTaGAACAGGTGGGTGATGTTC +
Preference number: 4 (lower is better)
Translates to: QSGVLDKQVTILIGQFCHVHFCF*NRWVMF
Trigger: GAACATCACCCACCTGTTCCAGAAGCAGAAATGGAC...ATGGCAAAACTGACCTATCAGAATGGTCACCTGTTTATCCAGAACCCCTGACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR CCA 90 bp TACCCTTCCCACTCCACAAAAGCAGATCCACTCAGAATGAAAGTATCGCTAAGGCTCACGTTCATCATCTaGCCAAGGCCACTTAGAAAG +
Preference number: 4 (lower is better)
Translates to: YPSHSTKADPLRMKVSLRLTFII*PRPLRK
Trigger: CTTTCTAAGTGGCCTTGGCCAGATGATGAACGTGAG...CCTTAGCGATACTTTCATTCTGAGTGGATCTGCTTTTGTGGAGTGGGAAGGGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR CCA 90 bp GTTCTGGATAAACAGGTGACCATTCTGATAGGTCAGTTTTGCCATCAGGAGTTCCGAAAATCACACATATaGCAACCACGGCATCCACGG +
Preference number: 4 (lower is better)
Translates to: VLDKQVTILIGQFCHQEFRKSHI*QPRHPR
Trigger: CCGTGGATGCCGTGGTTGCCATATGTGTGATTTTCG...GAACTCCTGATGGCAAAACTGACCTATCAGAATGGTCACCTGTTTATCCAGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR TCA 90 bp TACCCTTCCCACTCCACAAAAGCAGATCCACTCAGAATGAAAGTATCGCTAAGGGGAGTTGTTATAGTTTaGGACAGTTCCAGGAGACTC +
Preference number: 4 (lower is better)
Translates to: YPSHSTKADPLRMKVSLRGVVIV*DSSRRL
Trigger: GAGTCTCCTGGAACTGTCTCAAACTATAACAACTCC...CCTTAGCGATACTTTCATTCTGAGTGGATCTGCTTTTGTGGAGTGGGAAGGGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000013995.13
CDS-3UTR TCA 90 bp CACACATCCATACCCTTCCCACTCCACAAAAGCAGATCCACTCAGAATGAAAGTAGGAAGATAAGTTCTTaGCCAATGCATTCCACCAGC +
Preference number: 4 (lower is better)
Translates to: HTSIPFPLHKSRSTQNESRKISS*PMHSTS
Trigger: GCTGGTGGAATGCATTGGTCAAGAACTTATCTTCCT...ACTTTCATTCTGAGTGGATCTGCTTTTGTGGAGTGGGAAGGGTATGGATGTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR TCA 90 bp TCAGGGGTTCTGGATAAACAGGTGACCATTCTGATAGGTCAGTTTTGCCATCAGTGTTCTCTTTTCTGCTaGGCGCCACCTACAAACATA +
Preference number: 4 (lower is better)
Translates to: SGVLDKQVTILIGQFCHQCSLFC*APPTNI
Trigger: TATGTTTGTAGGTGGCGCTCAGCAGAAAAGAGAACA...CTGATGGCAAAACTGACCTATCAGAATGGTCACCTGTTTATCCAGAACCCCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR TCA 90 bp ACACATCCATACCCTTCCCACTCCACAAAAGCAGATCCACTCAGAATGAAAGTACGGAGGCACAATGATTaGAAGCATCAGAGCCAAGAA +
Preference number: 4 (lower is better)
Translates to: THPYPSHSTKADPLRMKVRRHND*KHQSQE
Trigger: TTCTTGGCTCTGATGCTTTCAATCATTGTGCCTCCG...TACTTTCATTCTGAGTGGATCTGCTTTTGTGGAGTGGGAAGGGTATGGATGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR TCA 90 bp TCAGGGGTTCTGGATAAACAGGTGACCATTCTGATAGGTCAGTTTTGCCATCAGCTGAAGAAGGTATATTaGTGCCCATACATCCAGGGA +
Preference number: 4 (lower is better)
Translates to: SGVLDKQVTILIGQFCHQLKKVY*CPYIQG
Trigger: TCCCTGGATGTATGGGCATCAATATACCTTCTTCAG...CTGATGGCAAAACTGACCTATCAGAATGGTCACCTGTTTATCCAGAACCCCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR TCA 90 bp GTTCTGGATAAACAGGTGACCATTCTGATAGGTCAGTTTTGCCATCAGGAGTTCAGATGTTCCTGTTCGTaGGGTCTTGTAGGACTTCAG +
Preference number: 4 (lower is better)
Translates to: VLDKQVTILIGQFCHQEFRCSCS*GLVGLQ
Trigger: CTGAAGTCCTACAAGACCTCACGAACAGGAACATCT...GAACTCCTGATGGCAAAACTGACCTATCAGAATGGTCACCTGTTTATCCAGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR GCA 90 bp TCAGGGGTTCTGGATAAACAGGTGACCATTCTGATAGGTCAGTTTTGCCATCAGACAAAGCGAATCTTCTaGCTTTTCCTCAGAGTCCAG +
Preference number: 4 (lower is better)
Translates to: SGVLDKQVTILIGQFCHQTKRIF*LFLRVQ
Trigger: CTGGACTCTGAGGAAAAGGCAGAAGATTCGCTTTGT...CTGATGGCAAAACTGACCTATCAGAATGGTCACCTGTTTATCCAGAACCCCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000013995.13
CDS-3UTR GCA 90 bp ACAAAAGCAGATCCACTCAGAATGAAAGTATCGCTAAGGCCAAAGCCACCAGTCGTTCAGAAGGACATCTaGCAGTACTTCAAGGTGTTC +
Preference number: 4 (lower is better)
Translates to: TKADPLRMKVSLRPKPPVVQKDI*QYFKVF
Trigger: GAACACCTTGAAGTACTGGCAGATGTCCTTCTGAAC...GACTGGTGGCTTTGGCCTTAGCGATACTTTCATTCTGAGTGGATCTGCTTTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR GCA 90 bp CAGTCAGGGGTTCTGGATAAACAGGTGACCATTCTGATAGGTCAGTTTTGCCATTACCACCCCTTCTATTaGCATAGCAACCAGGTTCTT +
Preference number: 4 (lower is better)
Translates to: QSGVLDKQVTILIGQFCHYHPFY*HSNQVL
Trigger: AAGAACCTGGTTGCTATGGCAATAGAAGGGGTGGTA...ATGGCAAAACTGACCTATCAGAATGGTCACCTGTTTATCCAGAACCCCTGACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR GCA 90 bp CACAAAAGCAGATCCACTCAGAATGAAAGTATCGCTAAGGCCAAAGCCACCAGTGAGCAGGTCATCGATTaGATCAAACTGAGGACAGTA +
Preference number: 4 (lower is better)
Translates to: HKSRSTQNESIAKAKATSEQVID*IKLRTV
Trigger: TACTGTCCTCAGTTTGATGCAATCGATGACCTGCTC...ACTGGTGGCTTTGGCCTTAGCGATACTTTCATTCTGAGTGGATCTGCTTTTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR CCA 90 bp CACACATCCATACCCTTCCCACTCCACAAAAGCAGATCCACTCAGAATGAAAGTTGTCAGTTCCAAGTCTaGGACTCCATAAGCAAACTG +
Preference number: 4 (lower is better)
Translates to: HTSIPFPLHKSRSTQNESCQFQV*DSISKL
Trigger: CAGTTTGCTTATGGAGTCCCAGACTTGGAACTGACA...ACTTTCATTCTGAGTGGATCTGCTTTTGTGGAGTGGGAAGGGTATGGATGTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000013995.13
CDS-3UTR CCA 90 bp CACACATCCATACCCTTCCCACTCCACAAAAGCAGATCCACTCAGAATGAAAGTAGCAGCAGGGGAATCTaGAGTAAAGAGGATTTTTCC +
Preference number: 4 (lower is better)
Translates to: HTSIPFPLHKSRSTQNESSSRGI*SKEDFS
Trigger: GGAAAAATCCTCTTTACTCCAGATTCCCCTGCTGCT...ACTTTCATTCTGAGTGGATCTGCTTTTGTGGAGTGGGAAGGGTATGGATGTGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000013995.13
CDS-3UTR CCA 90 bp AAAGCAGATCCACTCAGAATGAAAGTATCGCTAAGGCCAAAGCCACCAGTCAGGGTACTACATCCAGGTTaGTTTCAATGTCTTTTCCCC +
Preference number: 4 (lower is better)
Translates to: KADPLRMKVSLRPKPPVRVLHPG*FQCLFP
Trigger: GGGGAAAAGACATTGAAACCAACCTGGATGTAGTAC...CCTGACTGGTGGCTTTGGCCTTAGCGATACTTTCATTCTGAGTGGATCTGCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000013995.13
CDS-3UTR CCA 90 bp GTTCTGGATAAACAGGTGACCATTCTGATAGGTCAGTTTTGCCATCAGGAGTTCCTCCCACAAAAGCAATaGCAACAGACAGCTTCCTCT +
Preference number: 4 (lower is better)
Translates to: VLDKQVTILIGQFCHQEFLPQKQ*QQTASS
Trigger: AGAGGAAGCTGTCTGTTGCCATTGCTTTTGTGGGAG...GAACTCCTGATGGCAAAACTGACCTATCAGAATGGTCACCTGTTTATCCAGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000013995.13
CDS-3UTR CCA 90 bp GTTCTGGATAAACAGGTGACCATTCTGATAGGTCAGTTTTGCCATCAGGAGTTCCCAAGAACACGAAAGTaGCAGGGAGAACAATCTGAG +
Preference number: 4 (lower is better)
Translates to: VLDKQVTILIGQFCHQEFPRTRK*QGEQSE
Trigger: CTCAGATTGTTCTCCCTGCCACTTTCGTGTTCTTGG...GAACTCCTGATGGCAAAACTGACCTATCAGAATGGTCACCTGTTTATCCAGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR CCA 90 bp CAGAATGAAAGTATCGCTAAGGCCAAAGCCACCAGTCAGGGGTTCTGGATAAACATGAAGAGTCAAAGCTaGAAATTCACCAAACGGAGG +
Preference number: 4 (lower is better)
Translates to: QNESIAKAKATSQGFWINMKSQS*KFTKRR
Trigger: CCTCCGTTTGGTGAATTTCCAGCTTTGACTCTTCAT...GTTTATCCAGAACCCCTGACTGGTGGCTTTGGCCTTAGCGATACTTTCATTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR TCA 90 bp CTCCACAAAAGCAGATCCACTCAGAATGAAAGTATCGCTAAGGCCAAAGCCACCCAGGCTCTGGATCAATaGATTACAAAAGGATGTTGT +
Preference number: 4 (lower is better)
Translates to: LHKSRSTQNESIAKAKATQALDQ*ITKGCC
Trigger: ACAACATCCTTTTGTAATTCATTGATCCAGAGCCTG...GGTGGCTTTGGCCTTAGCGATACTTTCATTCTGAGTGGATCTGCTTTTGTGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000013995.13
CDS-3UTR TCA 90 bp ACAAAAGCAGATCCACTCAGAATGAAAGTATCGCTAAGGCCAAAGCCACCAGTCTCTTTTGAAATCCAATaGAGATGCCCACCACCAATC +
Preference number: 4 (lower is better)
Translates to: TKADPLRMKVSLRPKPPVSFEIQ*RCPPPI
Trigger: GATTGGTGGTGGGCATCTTCATTGGATTTCAAAAGA...GACTGGTGGCTTTGGCCTTAGCGATACTTTCATTCTGAGTGGATCTGCTTTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR TCA 90 bp TCAGGGGTTCTGGATAAACAGGTGACCATTCTGATAGGTCAGTTTTGCCATCAGTCTTTTGAAATCCAATaGAGATGCCCACCACCAATC +
Preference number: 4 (lower is better)
Translates to: SGVLDKQVTILIGQFCHQSFEIQ*RCPPPI
Trigger: GATTGGTGGTGGGCATCTTCATTGGATTTCAAAAGA...CTGATGGCAAAACTGACCTATCAGAATGGTCACCTGTTTATCCAGAACCCCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR GCA 90 bp CCCACACATCCATACCCTTCCCACTCCACAAAAGCAGATCCACTCAGAATGAAACTGGCATATGCTCTCTaGTTGAAATTCTTGTTTGGA +
Preference number: 4 (lower is better)
Translates to: PTHPYPSHSTKADPLRMKLAYAL*LKFLFG
Trigger: TCCAAACAAGAATTTCAAGCAGAGAGCATATGCCAG...TTTCATTCTGAGTGGATCTGCTTTTGTGGAGTGGGAAGGGTATGGATGTGTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR GCA 90 bp GTTCTGGATAAACAGGTGACCATTCTGATAGGTCAGTTTTGCCATCAGGAGTTCTACCACCCCTTCTATTaGCATAGCAACCAGGTTCTT +
Preference number: 4 (lower is better)
Translates to: VLDKQVTILIGQFCHQEFYHPFY*HSNQVL
Trigger: AAGAACCTGGTTGCTATGGCAATAGAAGGGGTGGTA...GAACTCCTGATGGCAAAACTGACCTATCAGAATGGTCACCTGTTTATCCAGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR GCA 90 bp ACACATCCATACCCTTCCCACTCCACAAAAGCAGATCCACTCAGAATGAAAGTAGAGCAGGTCATCGATTaGATCAAACTGAGGACAGTA +
Preference number: 4 (lower is better)
Translates to: THPYPSHSTKADPLRMKVEQVID*IKLRTV
Trigger: TACTGTCCTCAGTTTGATGCAATCGATGACCTGCTC...TACTTTCATTCTGAGTGGATCTGCTTTTGTGGAGTGGGAAGGGTATGGATGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR CCA 90 bp CAGTCAGGGGTTCTGGATAAACAGGTGACCATTCTGATAGGTCAGTTTTGCCATATGAAGAGTCAAAGCTaGAAATTCACCAAACGGAGG +
Preference number: 4 (lower is better)
Translates to: QSGVLDKQVTILIGQFCHMKSQS*KFTKRR
Trigger: CCTCCGTTTGGTGAATTTCCAGCTTTGACTCTTCAT...ATGGCAAAACTGACCTATCAGAATGGTCACCTGTTTATCCAGAACCCCTGACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR CCA 90 bp ACTCAGAATGAAAGTATCGCTAAGGCCAAAGCCACCAGTCAGGGGTTCTGGATAAAACAGGAAGGATGCTaGATACATCATAGGAATGAC +
Preference number: 4 (lower is better)
Translates to: TQNESIAKAKATSQGFWIKQEGC*IHHRND
Trigger: GTCATTCCTATGATGTATCCAGCATCCTTCCTGTTT...TATCCAGAACCCCTGACTGGTGGCTTTGGCCTTAGCGATACTTTCATTCTGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR CCA 90 bp ACAGGTGACCATTCTGATAGGTCAGTTTTGCCATCAGGAGTTCCGGTGAGCCAGAAGCAAGTCGTCCTTTaGAGATTTGATTTTCATTGT +
Preference number: 4 (lower is better)
Translates to: TGDHSDRSVLPSGVPVSQKQVVL*RFDFHC
Trigger: ACAATGAAAATCAAATCTCCAAAGGACGACTTGCTT...CTGGCTCACCGGAACTCCTGATGGCAAAACTGACCTATCAGAATGGTCACCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR TCA 90 bp TACCCTTCCCACTCCACAAAAGCAGATCCACTCAGAATGAAAGTATCGCTAAGGCATATGCTCTCTGCTTaGAATTCTTGTTTGGAAGGA +
Preference number: 4 (lower is better)
Translates to: YPSHSTKADPLRMKVSLRHMLSA*NSCLEG
Trigger: TCCTTCCAAACAAGAATTTCAAGCAGAGAGCATATG...CCTTAGCGATACTTTCATTCTGAGTGGATCTGCTTTTGTGGAGTGGGAAGGGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR TCA 90 bp GTCAGTTTTGCCATCAGGAGTTCCGGTGAGCCAGTGAATTTTGGTTTCTTTCTGTTAAGCTGCTTCTTATaGGAGCAGGGTACGTTTTTA +
Preference number: 4 (lower is better)
Translates to: VSFAIRSSGEPVNFGFFLLSCFL*EQGTFL
Trigger: TAAAAACGTACCCTGCTCTCATAAGAAGCAGCTTAA...CAGAAAGAAACCAAAATTCACTGGCTCACCGGAACTCCTGATGGCAAAACTGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR TCA 90 bp TACCCTTCCCACTCCACAAAAGCAGATCCACTCAGAATGAAAGTATCGCTAAGGTTAAGCTGCTTCTTATaGGAGCAGGGTACGTTTTTA +
Preference number: 4 (lower is better)
Translates to: YPSHSTKADPLRMKVSLRLSCFL*EQGTFL
Trigger: TAAAAACGTACCCTGCTCTCATAAGAAGCAGCTTAA...CCTTAGCGATACTTTCATTCTGAGTGGATCTGCTTTTGTGGAGTGGGAAGGGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR GCA 90 bp ACTCAGAATGAAAGTATCGCTAAGGCCAAAGCCACCAGTCAGGGGTTCTGGATACGATGGATAAACTTTTaGATTCTTGGTGACAGATCA +
Preference number: 4 (lower is better)
Translates to: TQNESIAKAKATSQGFWIRWINF*ILGDRS
Trigger: TGATCTGTCACCAAGAATGCAAAAGTTTATCCATCG...TATCCAGAACCCCTGACTGGTGGCTTTGGCCTTAGCGATACTTTCATTCTGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000013995.13
CDS-3UTR GCA 90 bp ACCCACACATCCATACCCTTCCCACTCCACAAAAGCAGATCCACTCAGAATGAAGGATGTTTTTCATCTTaGGAACTAAGGTCAAGTAGA +
Preference number: 4 (lower is better)
Translates to: THTSIPFPLHKSRSTQNEGCFSS*ELRSSR
Trigger: TCTACTTGACCTTAGTTCGCAAGATGAAAAACATCC...TTCATTCTGAGTGGATCTGCTTTTGTGGAGTGGGAAGGGTATGGATGTGTGGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000013995.13
CDS-3UTR GCA 90 bp GTCAGTTTTGCCATCAGGAGTTCCGGTGAGCCAGTGAATTTTGGTTTCTTTCTGCTGGCATATGCTCTCTaGTTGAAATTCTTGTTTGGA +
Preference number: 4 (lower is better)
Translates to: VSFAIRSSGEPVNFGFFLLAYAL*LKFLFG
Trigger: TCCAAACAAGAATTTCAAGCAGAGAGCATATGCCAG...CAGAAAGAAACCAAAATTCACTGGCTCACCGGAACTCCTGATGGCAAAACTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR GCA 90 bp TACCCTTCCCACTCCACAAAAGCAGATCCACTCAGAATGAAAGTATCGCTAAGGGAAAAGGCTGGCATATaGTCTCTGCTTGAAATTCTT +
Preference number: 4 (lower is better)
Translates to: YPSHSTKADPLRMKVSLREKAGI*SLLEIL
Trigger: AAGAATTTCAAGCAGAGAGCATATGCCAGCCTTTTC...CCTTAGCGATACTTTCATTCTGAGTGGATCTGCTTTTGTGGAGTGGGAAGGGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR GCA 90 bp CACAAAAGCAGATCCACTCAGAATGAAAGTATCGCTAAGGCCAAAGCCACCAGTGAAAAGGCTGGCATATaGTCTCTGCTTGAAATTCTT +
Preference number: 4 (lower is better)
Translates to: HKSRSTQNESIAKAKATSEKAGI*SLLEIL
Trigger: AAGAATTTCAAGCAGAGAGCATATGCCAGCCTTTTC...ACTGGTGGCTTTGGCCTTAGCGATACTTTCATTCTGAGTGGATCTGCTTTTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR GCA 90 bp CCCACACATCCATACCCTTCCCACTCCACAAAAGCAGATCCACTCAGAATGAAAACACCACTGATAAACTaGAAATGTTTAGCTTTCGTC +
Preference number: 4 (lower is better)
Translates to: PTHPYPSHSTKADPLRMKTPLIN*KCLAFV
Trigger: GACGAAAGCTAAACATTTGCAGTTTATCAGTGGTGT...TTTCATTCTGAGTGGATCTGCTTTTGTGGAGTGGGAAGGGTATGGATGTGTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR GCA 90 bp CCCACACATCCATACCCTTCCCACTCCACAAAAGCAGATCCACTCAGAATGAAATTCAAACAGGAAGGATaGTGGATACATCATAGGAAT +
Preference number: 4 (lower is better)
Translates to: PTHPYPSHSTKADPLRMKFKQEG*WIHHRN
Trigger: ATTCCTATGATGTATCCAGCATCCTTCCTGTTTGAA...TTTCATTCTGAGTGGATCTGCTTTTGTGGAGTGGGAAGGGTATGGATGTGTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR CCA 90 bp CAGTCAGGGGTTCTGGATAAACAGGTGACCATTCTGATAGGTCAGTTTTGCCATCAAGTCTTGAACACTTaGCCGATGGATAAACTTTTG +
Preference number: 4 (lower is better)
Translates to: QSGVLDKQVTILIGQFCHQVLNT*PMDKLL
Trigger: CAAAAGTTTATCCATCGGCCAAGTGTTCAAGACTTG...ATGGCAAAACTGACCTATCAGAATGGTCACCTGTTTATCCAGAACCCCTGACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000013995.13
CDS-3UTR TCA 90 bp TTCCCACTCCACAAAAGCAGATCCACTCAGAATGAAAGTATCGCTAAGGCCAAACATATGCTCTCTGCTTaGAATTCTTGTTTGGAAGGA +
Preference number: 4 (lower is better)
Translates to: FPLHKSRSTQNESIAKAKHMLSA*NSCLEG
Trigger: TCCTTCCAAACAAGAATTTCAAGCAGAGAGCATATG...TTTGGCCTTAGCGATACTTTCATTCTGAGTGGATCTGCTTTTGTGGAGTGGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR GCA 90 bp TACCCTTCCCACTCCACAAAAGCAGATCCACTCAGAATGAAAGTATCGCTAAGGACACCACTGATAAACTaGAAATGTTTAGCTTTCGTC +
Preference number: 4 (lower is better)
Translates to: YPSHSTKADPLRMKVSLRTPLIN*KCLAFV
Trigger: GACGAAAGCTAAACATTTGCAGTTTATCAGTGGTGT...CCTTAGCGATACTTTCATTCTGAGTGGATCTGCTTTTGTGGAGTGGGAAGGGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR CCA 90 bp TACCCTTCCCACTCCACAAAAGCAGATCCACTCAGAATGAAAGTATCGCTAAGGTTTGACTCCAGGCTCTaGATCAATGAATTACAAAAG +
Preference number: 4 (lower is better)
Translates to: YPSHSTKADPLRMKVSLRFDSRL*INELQK
Trigger: CTTTTGTAATTCATTGATCCAGAGCCTGGAGTCAAA...CCTTAGCGATACTTTCATTCTGAGTGGATCTGCTTTTGTGGAGTGGGAAGGGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000013995.13
CDS-3UTR CCA 90 bp CTCCACAAAAGCAGATCCACTCAGAATGAAAGTATCGCTAAGGCCAAAGCCACCCTTCAAAAGTTGAGTTaGCATTCTTCATTATCCTTC +
Preference number: 4 (lower is better)
Translates to: LHKSRSTQNESIAKAKATLQKLS*HSSLSF
Trigger: GAAGGATAATGAAGAATGCCAACTCAACTTTTGAAG...GGTGGCTTTGGCCTTAGCGATACTTTCATTCTGAGTGGATCTGCTTTTGTGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000013995.13
CDS-3UTR CCA 90 bp GTTCTGGATAAACAGGTGACCATTCTGATAGGTCAGTTTTGCCATCAGGAGTTCAAACAGGAAGGATGCTaGATACATCATAGGAATGAC +
Preference number: 4 (lower is better)
Translates to: VLDKQVTILIGQFCHQEFKQEGC*IHHRND
Trigger: GTCATTCCTATGATGTATCCAGCATCCTTCCTGTTT...GAACTCCTGATGGCAAAACTGACCTATCAGAATGGTCACCTGTTTATCCAGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR CCA 90 bp CAGAATGAAAGTATCGCTAAGGCCAAAGCCACCAGTCAGGGGTTCTGGATAAACAAGCAAGTCGTCCTTTaGAGATTTGATTTTCATTGT +
Preference number: 4 (lower is better)
Translates to: QNESIAKAKATSQGFWINKQVVL*RFDFHC
Trigger: ACAATGAAAATCAAATCTCCAAAGGACGACTTGCTT...GTTTATCCAGAACCCCTGACTGGTGGCTTTGGCCTTAGCGATACTTTCATTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR GCA 90 bp ACACATCCATACCCTTCCCACTCCACAAAAGCAGATCCACTCAGAATGAAAGTATTCAAACAGGAAGGATaGTGGATACATCATAGGAAT +
Preference number: 4 (lower is better)
Translates to: THPYPSHSTKADPLRMKVFKQEG*WIHHRN
Trigger: ATTCCTATGATGTATCCAGCATCCTTCCTGTTTGAA...TACTTTCATTCTGAGTGGATCTGCTTTTGTGGAGTGGGAAGGGTATGGATGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS CCA 90 bp GCAAAGGCTCCTGTGTCTGCAGCCGTCCGGATTTCTCTTCAAGCTTaGCTTGCCAGCTGGCTCCAGCAGCCCGGGGGTGCAGAGGGAGGT +
Preference number: 5 (lower is better)
Translates to: AKAPVSAAVRISLQA*LASWLQQPGGAEGG
Trigger: ACCTCCCTCTGCACCCCCGGGCTGCTGGAGCCAGCTGGCAAGCCAAGCTTGAAGAGAAATCCGGACGGCTGCAGACACAGGAGCCTTTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS CCA 90 bp GGCGGTCAGCGTAGAGAGACAAGCCCAGGCTCTGGATACCCCAGTTaGCAACCTTCTCGATTTCCTTCGATGGCACGCCCCGCAGCCTGG +
Preference number: 5 (lower is better)
Translates to: GGQRRETSPGSGYPS*QPSRFPSMARPAAW
Trigger: CCAGGCTGCGGGGCGTGCCATCGAAGGAAATCGAGAAGGTTGCCAACTGGGGTATCCAGAGCCTGGGCTTGTCTCTCTACGCTGACCGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS CCA 90 bp GTGTCTGCAGCCGTCCGGATTTCTCTTCAAGCTTGGCTTGCCAGCTaGCTCCAGCAGCCCGGGGGTGCAGAGGGAGGTCATAGGTCTCAG +
Preference number: 5 (lower is better)
Translates to: VSAAVRISLQAWLAS*LQQPGGAEGGHRSQ
Trigger: CTGAGACCTATGACCTCCCTCTGCACCCCCGGGCTGCTGGAGCCAGCTGGCAAGCCAAGCTTGAAGAGAAATCCGGACGGCTGCAGACAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS CCA 90 bp CCCTTGGGAGGATCCACTTGTCCTGGGGAACAGGTATGTGGGGCCTaGGCATACTGCCTGAGCTTCTCAGTGGGAGCCGAACAAGGGTGC +
Preference number: 5 (lower is better)
Translates to: PLGGSTCPGEQVCGA*AYCLSFSVGAEQGC
Trigger: GCACCCTTGTTCGGCTCCCACTGAGAAGCTCAGGCAGTATGCCCAGGCCCCACATACCTGTTCCCCAGGACAAGTGGATCCTCCCAAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS CCA 90 bp CTCTGGCTCTGGGGAAGGTTGGCCCTTGGGAGGATCCACTTGTCCTaGGGAACAGGTATGTGGGGCCTGGGCATACTGCCTGAGCTTCTC +
Preference number: 5 (lower is better)
Translates to: LWLWGRLALGRIHLS*GTGMWGLGILPELL
Trigger: GAGAAGCTCAGGCAGTATGCCCAGGCCCCACATACCTGTTCCCCAGGACAAGTGGATCCTCCCAAGGGCCAACCTTCCCCAGAGCCAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS CCA 90 bp CAGGGCCTGCACATGTTGAAGAATCAGCCGAGCACCTGTGTTGAATaGGACACCGGGGTCCTCTGGCTCTGGGGAAGGTTGGCCCTTGGG +
Preference number: 5 (lower is better)
Translates to: QGLHMLKNQPSTCVE*DTGVLWLWGRLALG
Trigger: CCCAAGGGCCAACCTTCCCCAGAGCCAGAGGACCCCGGTGTCCCATTCAACACAGGTGCTCGGCTGATTCTTCAACATGTGCAGGCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS CCA 90 bp GAAATGAGCAGCTGGAAGATCCTGGCCAGGGAGGACGAGGGGACCTaGAACTGGAGCATGCTGTGGTGTCTCTCCCTCTGCACGCTGCCA +
Preference number: 5 (lower is better)
Translates to: EMSSWKILAREDEGT*NWSMLWCLSLCTLP
Trigger: TGGCAGCGTGCAGAGGGAGAGACACCACAGCATGCTCCAGTTCCAGGTCCCCTCGTCCTCCCTGGCCAGGATCTTCCAGCTGCTCATTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS CCA 90 bp AAGAATCAGCCGAGCACCTGTGTTGAATGGGACACCGGGGTCCTCTaGCTCTGGGGAAGGTTGGCCCTTGGGAGGATCCACTTGTCCTGG +
Preference number: 5 (lower is better)
Translates to: KNQPSTCVEWDTGVL*LWGRLALGRIHLSW
Trigger: CCAGGACAAGTGGATCCTCCCAAGGGCCAACCTTCCCCAGAGCCAGAGGACCCCGGTGTCCCATTCAACACAGGTGCTCGGCTGATTCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS CCA 90 bp GAGTACTCCTCGATGAGCAGGCTGTCCTTGTGGGAAATGAGCAGCTaGAAGATCCTGGCCAGGGAGGACGAGGGGACCTGGAACTGGAGC +
Preference number: 5 (lower is better)
Translates to: EYSSMSRLSLWEMSS*KILAREDEGTWNWS
Trigger: GCTCCAGTTCCAGGTCCCCTCGTCCTCCCTGGCCAGGATCTTCCAGCTGCTCATTTCCCACAAGGACAGCCTGCTCATCGAGGAGTACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS TCA 90 bp GGAGCCGAACAAGGGTGCCGGAGACCGGCTTGTTCTCTTTTCTGCTaGGCGCCACCTACAAACATAGAGCCCGCTCCAGCATCCTCTGTG +
Preference number: 5 (lower is better)
Translates to: GAEQGCRRPACSLFC*APPTNIEPAPASSV
Trigger: CACAGAGGATGCTGGAGCGGGCTCTATGTTTGTAGGTGGCGCTCAGCAGAAAAGAGAACAAGCCGGTCTCCGGCACCCTTGTTCGGCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS CCA 90 bp TTGGAGGCCTCCCTGGTGACAGGACCCCCGCTCACGTTCATCATCTaGCCAAGGCCACTTAGAAAGCCAACAAGTGCTTCCCCGCTGATG +
Preference number: 5 (lower is better)
Translates to: LEASLVTGPPLTFII*PRPLRKPTSASPLM
Trigger: CATCAGCGGGGAAGCACTTGTTGGCTTTCTAAGTGGCCTTGGCCAGATGATGAACGTGAGCGGGGGTCCTGTCACCAGGGAGGCCTCCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS TCA 90 bp AGAAGTCCACATCGGCATACAGAGTGTCTTCTATCCACTGTAGGGTaGCCTGGGAGAGGGGACACAGGGCATCGCGTACCGTCTGTGCCC +
Preference number: 5 (lower is better)
Translates to: RSPHRHTECLLSTVG*PGRGDTGHRVPSVP
Trigger: GGGCACAGACGGTACGCGATGCCCTGTGTCCCCTCTCCCAGGTCACCCTACAGTGGATAGAAGACACTCTGTATGCCGATGTGGACTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000013995.13
CDS GCA 90 bp TTCTGCTGCCGTGGGGTTGCTTCCGTTAGCCAGTTGTTCAGATCCTaGGGGCAAAGGCTCCTGTGTCTGCAGCCGTCCGGATTTCTCTTC +
Preference number: 5 (lower is better)
Translates to: FCCRGVASVSQLFRS*GQRLLCLQPSGFLF
Trigger: GAAGAGAAATCCGGACGGCTGCAGACACAGGAGCCTTTGCCCGCAGGATCTGAACAACTGGCTAACGGAAGCAACCCCACGGCAGCAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS CCA 90 bp CAGGCTCTGGATACCCCAGTTGGCAACCTTCTCGATTTCCTTCGATaGCACGCCCCGCAGCCTGGCATAGAGGTAAAGGTGTTCTCTGCC +
Preference number: 5 (lower is better)
Translates to: QALDTPVGNLLDFLR*HAPQPGIEVKVFSA
Trigger: GGCAGAGAACACCTTTACCTCTATGCCAGGCTGCGGGGCGTGCCATCGAAGGAAATCGAGAAGGTTGCCAACTGGGGTATCCAGAGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS TCA 90 bp GAGCCACAAAGTCCTTGCGGCTGCGGATGGTGTGATGGAATCGCTTaGCTAGCAGGGCCTGCACATGTTGAAGAATCAGCCGAGCACCTG +
Preference number: 5 (lower is better)
Translates to: EPQSPCGCGWCDGIA*LAGPAHVEESAEHL
Trigger: CAGGTGCTCGGCTGATTCTTCAACATGTGCAGGCCCTGCTAGTCAAGCGATTCCATCACACCATCCGCAGCCGCAAGGACTTTGTGGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS GCA 90 bp TCTTGTACTTCACATGAGGAGGTAAGGAGCTGGCCCAGGGATACATaGCAGGGAACACCACTCCGGCCCAGAACCTGTTCTCCTCCAGGA +
Preference number: 5 (lower is better)
Translates to: SCTSHEEVRSWPRDT*QGTPLRPRTCSPPG
Trigger: TCCTGGAGGAGAACAGGTTCTGGGCCGGAGTGGTGTTCCCTGGCATGTATCCCTGGGCCAGCTCCTTACCTCCTCATGTGAAGTACAAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000013995.13
CDS GCA 90 bp GGACCTGGAACTGGAGCATGCTGTGGTGTCTCTCCCTCTGCACGCTaGCAGGGAAGTTGCCCTGGAAGAACTGCTCCACAGGATTCAAAT +
Preference number: 5 (lower is better)
Translates to: GPGTGACCGVSPSAR*QGSCPGRTAPQDSN
Trigger: ATTTGAATCCTGTGGAGCAGTTCTTCCAGGGCAACTTCCCTGGCAGCGTGCAGAGGGAGAGACACCACAGCATGCTCCAGTTCCAGGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS CCA 90 bp GCTTGGCTCAGTGCCAGGTCAATGAGGCCCCTGCCCAGGCAGAAGTaGGGGAAGACAATGAGCAACTTCCTCAACATGGCATTGAACCTG +
Preference number: 5 (lower is better)
Translates to: AWLSARSMRPLPRQK*GKTMSNFLNMALNL
Trigger: CAGGTTCAATGCCATGTTGAGGAAGTTGCTCATTGTCTTCCCCCACTTCTGCCTGGGCAGGGGCCTCATTGACCTGGCACTGAGCCAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS CCA 90 bp CTGCAGGAGGGCCTCGCTGCAGGCAATGTCTGTCAGTTCCAAGTCTaGGACTCCATAAGCAAACTGCTCCACACGAACTTGGGAGTTGAC +
Preference number: 5 (lower is better)
Translates to: LQEGLAAGNVCQFQV*DSISKLLHTNLGVD
Trigger: GTCAACTCCCAAGTTCGTGTGGAGCAGTTTGCTTATGGAGTCCCAGACTTGGAACTGACAGACATTGCCTGCAGCGAGGCCCTCCTGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000013995.13
CDS CCA 90 bp AGTACTGTGATGTCCGAGAGCTGCTCCTTGGTCAGGTTCAGAGGCTaGCTGATGACAGTGATTCCATACTCCTCAGGGTCCCTGTCCCTG +
Preference number: 5 (lower is better)
Translates to: STVMSESCSLVRFRG*LMTVIPYSSGSLSL
Trigger: CAGGGACAGGGACCCTGAGGAGTATGGAATCACTGTCATCAGCCAGCCTCTGAACCTGACCAAGGAGCAGCTCTCGGACATCACAGTACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS CCA 90 bp GAGCTTCTTCATTCCTCTTATGGTGGAGGCCCGTGTCTTCTAGCATaGCTTCCATCTCAAGCTGGGCCTCCTCCCAGGATCTCCCTTTCA +
Preference number: 5 (lower is better)
Translates to: ELLHSSYGGGPCLLA*LPSQAGPPPRISLS
Trigger: TGAAAGGGAGATCCTGGGAGGAGGCCCAGCTTGAGATGGAAGCCATGCTAGAAGACACGGGCCTCCACCATAAGAGGAATGAAGAAGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000013995.13
CDS-3UTR CAA 90 bp CCACTCAGAATGAAAGTATCGCTAAGGCCAAAGCCACCAGTCAGGGGTTCTGGAGAGAGACAGGGCTCGTaGGGTGAGCTGCACTTCATC +
Preference number: 5 (lower is better)
Translates to: PLRMKVSLRPKPPVRGSGERQGS*GELHFI
Trigger: GATGAAGTGCAGCTCACCCAACGAGCCCTGTCTCTC...TCCAGAACCCCTGACTGGTGGCTTTGGCCTTAGCGATACTTTCATTCTGAGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000013995.13
CDS TCA 90 bp GCTCGGCCCAAACCTGGCCAAGGTGCTGGACCTCCGGGGTGTCCATaGAGAGTTCTTGAAAATCTCGATATACTCTTGCCAAGATGGAGT +
Preference number: 5 (lower is better)
Translates to: ARPKPGQGAGPPGCP*RVLENLDILLPRWS
Trigger: ACTCCATCTTGGCAAGAGTATATCGAGATTTTCAAGAACTCTTCATGGACACCCCGGAGGTCCAGCACCTTGGCCAGGTTTGGGCCGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000013995.13
CDS TCA 90 bp AGGATGTCTCGGATTTGTAATCCTCTTCCTGCAAATCTCTCAGGGTaGGTCCTCAGGGTGTCCATGAACTGCGACAAGGTGCGGAGCTCG +
Preference number: 5 (lower is better)
Translates to: RMSRICNPLPANLSG*VLRVSMNCDKVRSS
Trigger: CGAGCTCCGCACCTTGTCGCAGTTCATGGACACCCTGAGGACTCACCCTGAGAGATTTGCAGGAAGAGGATTACAAATCCGAGACATCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000013995.13
CDS TCA 90 bp TGTTATCTCATCGACTCGGGTTGGACACCTGGTAGAGAAACCCTTTaGTGTACAGCTGCAGACCCCCTCACAGCCACCTCTTTGGCTCTG +
Preference number: 5 (lower is better)
Translates to: CYLIDSGWTPGRETL*CTAADPLTATSLAL
Trigger: CAGAGCCAAAGAGGTGGCTGTGAGGGGGTCTGCAGCTGTACATCAAAGGGTTTCTCTACCAGGTGTCCAACCCGAGTCGATGAGATAACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000013995.13
CDS TCA 90 bp GAGCAGGGTACGTTTTTACCAAGTAGTCGGAGATGTTCCTGTTCGTaGGGTCTTGTAGGACTTCAGTGCTGCGCTGTGTCCTCTGTGGGG +
Preference number: 5 (lower is better)
Translates to: EQGTFLPSSRRCSCS*GLVGLQCCAVSSVG
Trigger: CCCCACAGAGGACACAGCGCAGCACTGAAGTCCTACAAGACCTCACGAACAGGAACATCTCCGACTACTTGGTAAAAACGTACCCTGCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR CAA 90 bp CACACATCCATACCCTTCCCACTCCACAAAAGCAGATCCACTCAGAATGAAAGTTTGCAGCCCCAGGCCTaGCTCCTCAAAGCGGACCAG +
Preference number: 5 (lower is better)
Translates to: HTSIPFPLHKSRSTQNESLQPQA*LLKADQ
Trigger: CTGGTCCGCTTTGAGGAGCAAGGCCTGGGGCTGCAA...ACTTTCATTCTGAGTGGATCTGCTTTTGTGGAGTGGGAAGGGTATGGATGTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000013995.13
CDS-3UTR CAA 90 bp AAAGCAGATCCACTCAGAATGAAAGTATCGCTAAGGCCAAAGCCACCAGTCAGGCCCAATGTTGCTCCATaGCAGCCCCAGGCCTTGCTC +
Preference number: 5 (lower is better)
Translates to: KADPLRMKVSLRPKPPVRPNVAP*QPQALL
Trigger: GAGCAAGGCCTGGGGCTGCAATGGAGCAACATTGGG...CCTGACTGGTGGCTTTGGCCTTAGCGATACTTTCATTCTGAGTGGATCTGCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000013995.13
CDS-3UTR CAA 90 bp CCACTCAGAATGAAAGTATCGCTAAGGCCAAAGCCACCAGTCAGGGGTTCTGGATGCATTCCACCAGCTTaGCCTCTGGGACATGGTGGT +
Preference number: 5 (lower is better)
Translates to: PLRMKVSLRPKPPVRGSGCIPPA*PLGHGG
Trigger: ACCACCATGTCCCAGAGGCAAAGCTGGTGGAATGCA...TCCAGAACCCCTGACTGGTGGCTTTGGCCTTAGCGATACTTTCATTCTGAGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR CAA 90 bp CAGAATGAAAGTATCGCTAAGGCCAAAGCCACCAGTCAGGGGTTCTGGATAAACGGGGAAGGTTGGCCCTaGGGAGGATCCACTTGTCCT +
Preference number: 5 (lower is better)
Translates to: QNESIAKAKATSQGFWINGEGWP*GGSTCP
Trigger: AGGACAAGTGGATCCTCCCAAGGGCCAACCTTCCCC...GTTTATCCAGAACCCCTGACTGGTGGCTTTGGCCTTAGCGATACTTTCATTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR CAA 90 bp ACAAAAGCAGATCCACTCAGAATGAAAGTATCGCTAAGGCCAAAGCCACCAGTCAGCCGAGCACCTGTGTaGAATGGGACACCGGGGTCC +
Preference number: 5 (lower is better)
Translates to: TKADPLRMKVSLRPKPPVSRAPV*NGTPGS
Trigger: GGACCCCGGTGTCCCATTCAACACAGGTGCTCGGCT...GACTGGTGGCTTTGGCCTTAGCGATACTTTCATTCTGAGTGGATCTGCTTTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR CAA 90 bp GTCAGTTTTGCCATCAGGAGTTCCGGTGAGCCAGTGAATTTTGGTTTCTTTCTGAGCCGAGCACCTGTGTaGAATGGGACACCGGGGTCC +
Preference number: 5 (lower is better)
Translates to: VSFAIRSSGEPVNFGFFLSRAPV*NGTPGS
Trigger: GGACCCCGGTGTCCCATTCAACACAGGTGCTCGGCT...CAGAAAGAAACCAAAATTCACTGGCTCACCGGAACTCCTGATGGCAAAACTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR CAA 90 bp ACAAAAGCAGATCCACTCAGAATGAAAGTATCGCTAAGGCCAAAGCCACCAGTCTCTCTGGTGCTGCACTaGCAGGAGGGAGAGGGGTGG +
Preference number: 5 (lower is better)
Translates to: TKADPLRMKVSLRPKPPVSLVLH*QEGEGW
Trigger: CCACCCCTCTCCCTCCTGCAAGTGCAGCACCAGAGA...GACTGGTGGCTTTGGCCTTAGCGATACTTTCATTCTGAGTGGATCTGCTTTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR CAA 90 bp CAGTCAGGGGTTCTGGATAAACAGGTGACCATTCTGATAGGTCAGTTTTGCCATTCTCTGGTGCTGCACTaGCAGGAGGGAGAGGGGTGG +
Preference number: 5 (lower is better)
Translates to: QSGVLDKQVTILIGQFCHSLVLH*QEGEGW
Trigger: CCACCCCTCTCCCTCCTGCAAGTGCAGCACCAGAGA...ATGGCAAAACTGACCTATCAGAATGGTCACCTGTTTATCCAGAACCCCTGACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR CAA 90 bp CCACTCAGAATGAAAGTATCGCTAAGGCCAAAGCCACCAGTCAGGGGTTCTGGAGACGTCTGTCACAGCTaGGCTCAGTGCCAGGTCAAT +
Preference number: 5 (lower is better)
Translates to: PLRMKVSLRPKPPVRGSGDVCHS*AQCQVN
Trigger: ATTGACCTGGCACTGAGCCAAGCTGTGACAGACGTC...TCCAGAACCCCTGACTGGTGGCTTTGGCCTTAGCGATACTTTCATTCTGAGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR CAA 90 bp AGCCACCAGTCAGGGGTTCTGGATAAACAGGTGACCATTCTGATAGGTCAGTTTCTCTTCAAGCTTGGCTaGCCAGCTGGCTCCAGCAGC +
Preference number: 5 (lower is better)
Translates to: SHQSGVLDKQVTILIGQFLFKLG*PAGSSS
Trigger: GCTGCTGGAGCCAGCTGGCAAGCCAAGCTTGAAGAG...AAACTGACCTATCAGAATGGTCACCTGTTTATCCAGAACCCCTGACTGGTGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS TCA 90 bp CGGCCCAGAACCTGTTCTCCTCCAGGAGAGACAGGGCTCGTTGGGTaGGCTGCACTTCATCATCATAACTTTCAAACTTATCCAGGACCA +
Preference number: 5 (lower is better)
Translates to: RPRTCSPPGETGLVG*AALHHHNFQTYPGP
Trigger: TGGTCCTGGATAAGTTTGAAAGTTATGATGATGAAGTGCAGCTCACCCAACGAGCCCTGTCTCTCCTGGAGGAGAACAGGTTCTGGGCCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000013995.13
CDS TCA 90 bp ATCCAGGTTGGTTTCAATGTCTTTTCCCCCAATGAGCACAGTTCCTaGCGTCGGTGGCAACAGTCCTGTCAGGATGGACAAGGTGGTGGT +
Preference number: 5 (lower is better)
Translates to: IQVGFNVFSPNEHSS*RRWQQSCQDGQGGG
Trigger: ACCACCACCTTGTCCATCCTGACAGGACTGTTGCCACCGACGTCAGGAACTGTGCTCATTGGGGGAAAAGACATTGAAACCAACCTGGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000013995.13
CDS TCA 90 bp TCTGCCGTACTACATCCAGGTTGGTTTCAATGTCTTTTCCCCCAATaGGCACAGTTCCTGACGTCGGTGGCAACAGTCCTGTCAGGATGG +
Preference number: 5 (lower is better)
Translates to: SAVLHPGWFQCLFPQ*AQFLTSVATVLSGW
Trigger: CCATCCTGACAGGACTGTTGCCACCGACGTCAGGAACTGTGCTCATTGGGGGAAAAGACATTGAAACCAACCTGGATGTAGTACGGCAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000013995.13
CDS TCA 90 bp TTTAGCGAAGTTTACAAACACCTGGTCCAGCGTGGTCTGGGTGACTaGGTACTCCTCGATGAGCAGGCTGTCCTTGTGGGAAATGAGCAG +
Preference number: 5 (lower is better)
Translates to: FSEVYKHLVQRGLGD*VLLDEQAVLVGNEQ
Trigger: CTGCTCATTTCCCACAAGGACAGCCTGCTCATCGAGGAGTACTCAGTCACCCAGACCACGCTGGACCAGGTGTTTGTAAACTTCGCTAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS GCA 90 bp CCTTCTTCTCCGAGCTGCCTATTTATGAAGTCTTTGACGGTTGGGTaGTGCAGGGTGTCTCGGATCACGGTCATCTGTGTGCTCTTCTCA +
Preference number: 5 (lower is better)
Translates to: PSSPSCLFMKSLTVG*CRVSRITVICVLFS
Trigger: TGAGAAGAGCACACAGATGACCGTGATCCGAGACACCCTGCAGCACCCAACCGTCAAAGACTTCATAAATAGGCAGCTCGGAGAAGAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000013995.13
CDS CCA 90 bp CGGATCACGGTCATCTGTGTGCTCTTCTCAAAGAAGTACCAGATCTaGGGCCCCACTTCCTCCCAGGCTTTTACCAACTTCCTAACTCGA +
Preference number: 5 (lower is better)
Translates to: RITVICVLFSKKYQI*GPTSSQAFTNFLTR
Trigger: TCGAGTTAGGAAGTTGGTAAAAGCCTGGGAGGAAGTGGGGCCCCAGATCTGGTACTTCTTTGAGAAGAGCACACAGATGACCGTGATCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000013995.13
CDS-3UTR CAA 90 bp GTTCTGGATAAACAGGTGACCATTCTGATAGGTCAGTTTTGCCATCAGGAGTTCTGGCTCTGGGGAAGGTaGGCCCTTGGGAGGATCCAC +
Preference number: 5 (lower is better)
Translates to: VLDKQVTILIGQFCHQEFWLWGR*ALGRIH
Trigger: GTGGATCCTCCCAAGGGCCAACCTTCCCCAGAGCCA...GAACTCCTGATGGCAAAACTGACCTATCAGAATGGTCACCTGTTTATCCAGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR CAA 90 bp ACCCACACATCCATACCCTTCCCACTCCACAAAAGCAGATCCACTCAGAATGAACAGGGCCTGCACATGTaGAAGAATCAGCCGAGCACC +
Preference number: 5 (lower is better)
Translates to: THTSIPFPLHKSRSTQNEQGLHM*KNQPST
Trigger: GGTGCTCGGCTGATTCTTCAACATGTGCAGGCCCTG...TTCATTCTGAGTGGATCTGCTTTTGTGGAGTGGGAAGGGTATGGATGTGTGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR CAA 90 bp CACACATCCATACCCTTCCCACTCCACAAAAGCAGATCCACTCAGAATGAAAGTCTCTTCAAGCTTGGCTaGCCAGCTGGCTCCAGCAGC +
Preference number: 5 (lower is better)
Translates to: HTSIPFPLHKSRSTQNESLFKLG*PAGSSS
Trigger: GCTGCTGGAGCCAGCTGGCAAGCCAAGCTTGAAGAG...ACTTTCATTCTGAGTGGATCTGCTTTTGTGGAGTGGGAAGGGTATGGATGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS GCA 90 bp GTGTTGGATGAGCAGGGTCAGAAGGAAGTATACCACCCCTTCTATTaGCATAGCAACCAGGTTCTTCCCAATCAGGTCCCACTGGAATGG +
Preference number: 5 (lower is better)
Translates to: VLDEQGQKEVYHPFY*HSNQVLPNQVPLEW
Trigger: CCATTCCAGTGGGACCTGATTGGGAAGAACCTGGTTGCTATGGCAATAGAAGGGGTGGTATACTTCCTTCTGACCCTGCTCATCCAACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS CCA 90 bp AATGCCTTCTTCTCCGAGCTGCCTATTTATGAAGTCTTTGACGGTTaGGTGCTGCAGGGTGTCTCGGATCACGGTCATCTGTGTGCTCTT +
Preference number: 5 (lower is better)
Translates to: NAFFSELPIYEVFDG*VLQGVSDHGHLCAL
Trigger: AAGAGCACACAGATGACCGTGATCCGAGACACCCTGCAGCACCCAACCGTCAAAGACTTCATAAATAGGCAGCTCGGAGAAGAAGGCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000013995.13
CDS CCA 90 bp CGTGATTTGGTTCTCATAGAAAGTGATGTTCAGACGGTCCACAGCTaGCCGGCCACTGGGCTCAAAAACCTTCACCAGGTTCTTCACACA +
Preference number: 5 (lower is better)
Translates to: RDLVLIESDVQTVHS*PATGLKNLHQVLHT
Trigger: TGTGTGAAGAACCTGGTGAAGGTTTTTGAGCCCAGTGGCCGGCCAGCTGTGGACCGTCTGAACATCACTTTCTATGAGAACCAAATCACG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000013995.13
CDS-3UTR CAA 90 bp TCAGGGGTTCTGGATAAACAGGTGACCATTCTGATAGGTCAGTTTTGCCATCAGGGACTCTTCCCAATGTaGCTCCATTGCAGCCCCAGG +
Preference number: 5 (lower is better)
Translates to: SGVLDKQVTILIGQFCHQGLFPM*LHCSPR
Trigger: CCTGGGGCTGCAATGGAGCAACATTGGGAAGAGTCC...CTGATGGCAAAACTGACCTATCAGAATGGTCACCTGTTTATCCAGAACCCCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000013995.13
CDS-3UTR CAA 90 bp ACACATCCATACCCTTCCCACTCCACAAAAGCAGATCCACTCAGAATGAAAGTAGGGGAAGGTTGGCCCTaGGGAGGATCCACTTGTCCT +
Preference number: 5 (lower is better)
Translates to: THPYPSHSTKADPLRMKVGEGWP*GGSTCP
Trigger: AGGACAAGTGGATCCTCCCAAGGGCCAACCTTCCCC...TACTTTCATTCTGAGTGGATCTGCTTTTGTGGAGTGGGAAGGGTATGGATGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR CAA 90 bp ACAAAAGCAGATCCACTCAGAATGAAAGTATCGCTAAGGCCAAAGCCACCAGTCCAGGGCCTGCACATGTaGAAGAATCAGCCGAGCACC +
Preference number: 5 (lower is better)
Translates to: TKADPLRMKVSLRPKPPVQGLHM*KNQPST
Trigger: GGTGCTCGGCTGATTCTTCAACATGTGCAGGCCCTG...GACTGGTGGCTTTGGCCTTAGCGATACTTTCATTCTGAGTGGATCTGCTTTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR CAA 90 bp TTCCCACTCCACAAAAGCAGATCCACTCAGAATGAAAGTATCGCTAAGGCCAAATCCGAGAGCTGCTCCTaGGTCAGGTTCAGAGGCTGG +
Preference number: 5 (lower is better)
Translates to: FPLHKSRSTQNESIAKAKSESCS*VRFRGW
Trigger: CCAGCCTCTGAACCTGACCAAGGAGCAGCTCTCGGA...TTTGGCCTTAGCGATACTTTCATTCTGAGTGGATCTGCTTTTGTGGAGTGGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR CAA 90 bp ACACATCCATACCCTTCCCACTCCACAAAAGCAGATCCACTCAGAATGAAAGTATCCGAGAGCTGCTCCTaGGTCAGGTTCAGAGGCTGG +
Preference number: 5 (lower is better)
Translates to: THPYPSHSTKADPLRMKVSESCS*VRFRGW
Trigger: CCAGCCTCTGAACCTGACCAAGGAGCAGCTCTCGGA...TACTTTCATTCTGAGTGGATCTGCTTTTGTGGAGTGGGAAGGGTATGGATGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR CAA 90 bp AAAGCAGATCCACTCAGAATGAAAGTATCGCTAAGGCCAAAGCCACCAGTCAGGGACGTCTGTCACAGCTaGGCTCAGTGCCAGGTCAAT +
Preference number: 5 (lower is better)
Translates to: KADPLRMKVSLRPKPPVRDVCHS*AQCQVN
Trigger: ATTGACCTGGCACTGAGCCAAGCTGTGACAGACGTC...CCTGACTGGTGGCTTTGGCCTTAGCGATACTTTCATTCTGAGTGGATCTGCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS TCA 90 bp GGACCACCGTTCTGCAGGAGAGGTCTGCTCACCCATAGCAAGTCTTaGACACTTGGCCGATGGATAAACTTTTGCATTCTTGGTGACAGA +
Preference number: 5 (lower is better)
Translates to: GPPFCRRGLLTHSKS*TLGRWINFCILGDR
Trigger: TCTGTCACCAAGAATGCAAAAGTTTATCCATCGGCCAAGTGTTCAAGACTTGCTATGGGTGAGCAGACCTCTCCTGCAGAACGGTGGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000013995.13
CDS CCA 90 bp TCTCCTCTGTTAAGGGTTCAGTCTTTTCCAGAGCCCTTTCTTCTCTaGTCGAACAACCTTCACCACCAAGCCAGTAGGACTCCTGCAGAA +
Preference number: 5 (lower is better)
Translates to: SPLLRVQSFPEPFLL*SNNLHHQASRTPAE
Trigger: TTCTGCAGGAGTCCTACTGGCTTGGTGGTGAAGGTTGTTCGACCAGAGAAGAAAGGGCTCTGGAAAAGACTGAACCCTTAACAGAGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000013995.13
CDS CCA 90 bp TATTGCCATAGCAACCAGGTTCTTCCCAATCAGGTCCCACTGGAATaGGTTTGCAGAGTACTCCTCACCAAACTGGGCATAGACGTCTGT +
Preference number: 5 (lower is better)
Translates to: YCHSNQVLPNQVPLE*VCRVLLTKLGIDVC
Trigger: ACAGACGTCTATGCCCAGTTTGGTGAGGAGTACTCTGCAAACCCATTCCAGTGGGACCTGATTGGGAAGAACCTGGTTGCTATGGCAATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR CAA 90 bp CACACATCCATACCCTTCCCACTCCACAAAAGCAGATCCACTCAGAATGAAAGTAGGCGGGGTCTTTCCTaGTGGAATCAATCCCCAGGA +
Preference number: 5 (lower is better)
Translates to: HTSIPFPLHKSRSTQNESRRGLS*WNQSPG
Trigger: TCCTGGGGATTGATTCCACAAGGAAAGACCCCGCCT...ACTTTCATTCTGAGTGGATCTGCTTTTGTGGAGTGGGAAGGGTATGGATGTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000013995.13
CDS-3UTR CAA 90 bp CAGTCAGGGGTTCTGGATAAACAGGTGACCATTCTGATAGGTCAGTTTTGCCATCCATCAGCAATGGCTTaGCCGCCCTCCAGGCTATTT +
Preference number: 5 (lower is better)
Translates to: QSGVLDKQVTILIGQFCHPSAMA*PPSRLF
Trigger: AAATAGCCTGGAGGGCGGCAAAGCCATTGCTGATGG...ATGGCAAAACTGACCTATCAGAATGGTCACCTGTTTATCCAGAACCCCTGACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000013995.13
CDS-3UTR CAA 90 bp CCACTCAGAATGAAAGTATCGCTAAGGCCAAAGCCACCAGTCAGGGGTTCTGGACTCACAGCCACCTCTTaGGCTCTGGATGTTTTTCAT +
Preference number: 5 (lower is better)
Translates to: PLRMKVSLRPKPPVRGSGLTATS*ALDVFH
Trigger: ATGAAAAACATCCAGAGCCAAAGAGGTGGCTGTGAG...TCCAGAACCCCTGACTGGTGGCTTTGGCCTTAGCGATACTTTCATTCTGAGTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000013995.13
CDS-3UTR CAA 90 bp TCAGGGGTTCTGGATAAACAGGTGACCATTCTGATAGGTCAGTTTTGCCATCAGCTTGGGAGGATCCACTaGTCCTGGGGAACAGGTATG +
Preference number: 5 (lower is better)
Translates to: SGVLDKQVTILIGQFCHQLGRIH*SWGTGM
Trigger: CATACCTGTTCCCCAGGACAAGTGGATCCTCCCAAG...CTGATGGCAAAACTGACCTATCAGAATGGTCACCTGTTTATCCAGAACCCCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR CAA 90 bp ACAAAAGCAGATCCACTCAGAATGAAAGTATCGCTAAGGCCAAAGCCACCAGTCCTTGGGAGGATCCACTaGTCCTGGGGAACAGGTATG +
Preference number: 5 (lower is better)
Translates to: TKADPLRMKVSLRPKPPVLGRIH*SWGTGM
Trigger: CATACCTGTTCCCCAGGACAAGTGGATCCTCCCAAG...GACTGGTGGCTTTGGCCTTAGCGATACTTTCATTCTGAGTGGATCTGCTTTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR CAA 90 bp CACACATCCATACCCTTCCCACTCCACAAAAGCAGATCCACTCAGAATGAAAGTTTCCTCAACATGGCATaGAACCTGAGCAGCGTCCGG +
Preference number: 5 (lower is better)
Translates to: HTSIPFPLHKSRSTQNESFLNMA*NLSSVR
Trigger: CCGGACGCTGCTCAGGTTCAATGCCATGTTGAGGAA...ACTTTCATTCTGAGTGGATCTGCTTTTGTGGAGTGGGAAGGGTATGGATGTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR CAA 90 bp CAGTCAGGGGTTCTGGATAAACAGGTGACCATTCTGATAGGTCAGTTTTGCCATTTCCTCAACATGGCATaGAACCTGAGCAGCGTCCGG +
Preference number: 5 (lower is better)
Translates to: QSGVLDKQVTILIGQFCHFLNMA*NLSSVR
Trigger: CCGGACGCTGCTCAGGTTCAATGCCATGTTGAGGAA...ATGGCAAAACTGACCTATCAGAATGGTCACCTGTTTATCCAGAACCCCTGACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR CAA 90 bp ACAGGTGACCATTCTGATAGGTCAGTTTTGCCATCAGGAGTTCCGGTGAGCCAGTCTCCAAACTTGTACTaGAGGTGTTGGATGGTACCC +
Preference number: 5 (lower is better)
Translates to: TGDHSDRSVLPSGVPVSQSPNLY*RCWMVP
Trigger: GGGTACCATCCAACACCTCAAGTACAAGTTTGGAGA...CTGGCTCACCGGAACTCCTGATGGCAAAACTGACCTATCAGAATGGTCACCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR CAA 90 bp ACTCAGAATGAAAGTATCGCTAAGGCCAAAGCCACCAGTCAGGGGTTCTGGATAGATTTCTCTTCAAGCTaGGCTTGCCAGCTGGCTCCA +
Preference number: 5 (lower is better)
Translates to: TQNESIAKAKATSQGFWIDFSSS*ACQLAP
Trigger: TGGAGCCAGCTGGCAAGCCAAGCTTGAAGAGAAATC...TATCCAGAACCCCTGACTGGTGGCTTTGGCCTTAGCGATACTTTCATTCTGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR CAA 90 bp AGCCACCAGTCAGGGGTTCTGGATAAACAGGTGACCATTCTGATAGGTCAGTTTGATTTCTCTTCAAGCTaGGCTTGCCAGCTGGCTCCA +
Preference number: 5 (lower is better)
Translates to: SHQSGVLDKQVTILIGQFDFSSS*ACQLAP
Trigger: TGGAGCCAGCTGGCAAGCCAAGCTTGAAGAGAAATC...AAACTGACCTATCAGAATGGTCACCTGTTTATCCAGAACCCCTGACTGGTGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS GCA 90 bp TGGAAGGAGGAAGATAAGTTCTTGACCAATGCATTCCACCAGCTTTaGCTCTGGGACATGGTGGTATACCAAATCCATCAGCTCCTGCAC +
Preference number: 5 (lower is better)
Translates to: WKEEDKFLTNAFHQL*LWDMVVYQIHQLLH
Trigger: GTGCAGGAGCTGATGGATTTGGTATACCACCATGTCCCAGAGGCAAAGCTGGTGGAATGCATTGGTCAAGAACTTATCTTCCTCCTTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000013995.13
CDS CCA 90 bp CTATCCAGGAACCAGGTACACCAGATGACAGCATTAGAGACGCCTTaGTTTTTCAAGGTCTCCTTCAGCCTCAGCTCCTTCTCCAAAACA +
Preference number: 5 (lower is better)
Translates to: LSRNQVHQMTALETP*FFKVSFSLSSFSKT
Trigger: TGTTTTGGAGAAGGAGCTGAGGCTGAAGGAGACCTTGAAAAACCAAGGCGTCTCTAATGCTGTCATCTGGTGTACCTGGTTCCTGGATAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000013995.13
CDS CCA 90 bp GAGGAAGATAAGTTCTTGACCAATGCATTCCACCAGCTTTGCCTCTaGGACATGGTGGTATACCAAATCCATCAGCTCCTGCACATCTCC +
Preference number: 5 (lower is better)
Translates to: EEDKFLTNAFHQLCL*DMVVYQIHQLLHIS
Trigger: GGAGATGTGCAGGAGCTGATGGATTTGGTATACCACCATGTCCCAGAGGCAAAGCTGGTGGAATGCATTGGTCAAGAACTTATCTTCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000013995.13
CDS CCA 90 bp CCATCCATACAGCATGAGCAGAGAGACGAGAGCAGGAAGGTTGTCTaGGGATGTGTAGGCTTTCTTTTGAAATCCAATGAAGATGCCCAC +
Preference number: 5 (lower is better)
Translates to: PSIQHEQRDESRKVV*GCVGFLLKSNEDAH
Trigger: GTGGGCATCTTCATTGGATTTCAAAAGAAAGCCTACACATCCCCAGACAACCTTCCTGCTCTCGTCTCTCTGCTCATGCTGTATGGATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR CAA 90 bp ACTCAGAATGAAAGTATCGCTAAGGCCAAAGCCACCAGTCAGGGGTTCTGGATAGCTGAAGGCATCGCCTaGTTGGGAAAATGGCATTCA +
Preference number: 5 (lower is better)
Translates to: TQNESIAKAKATSQGFWIAEGIA*LGKWHS
Trigger: TGAATGCCATTTTCCCAACAAGGCGATGCCTTCAGC...TATCCAGAACCCCTGACTGGTGGCTTTGGCCTTAGCGATACTTTCATTCTGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000013995.13
CDS-3UTR CAA 90 bp GTCAGTTTTGCCATCAGGAGTTCCGGTGAGCCAGTGAATTTTGGTTTCTTTCTGACACGAACTTGGGAGTaGACCAGAAGATGGGCAACC +
Preference number: 5 (lower is better)
Translates to: VSFAIRSSGEPVNFGFFLTRTWE*TRRWAT
Trigger: GGTTGCCCATCTTCTGGTCAACTCCCAAGTTCGTGT...CAGAAAGAAACCAAAATTCACTGGCTCACCGGAACTCCTGATGGCAAAACTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000013995.13
CDS-3UTR CAA 90 bp CCACTCAGAATGAAAGTATCGCTAAGGCCAAAGCCACCAGTCAGGGGTTCTGGATTTTGGTTAAAGGGTTaGACTCCAGGCTCTGGATCA +
Preference number: 5 (lower is better)
Translates to: PLRMKVSLRPKPPVRGSGFWLKG*TPGSGS
Trigger: TGATCCAGAGCCTGGAGTCAAACCCTTTAACCAAAA...TCCAGAACCCCTGACTGGTGGCTTTGGCCTTAGCGATACTTTCATTCTGAGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000013995.13
CDS-3UTR CAA 90 bp TACCCTTCCCACTCCACAAAAGCAGATCCACTCAGAATGAAAGTATCGCTAAGGGGAGATAGACTCCAATaGGAGGCTCTGCCTGCATCT +
Preference number: 5 (lower is better)
Translates to: YPSHSTKADPLRMKVSLRGDRLQ*EALPAS
Trigger: AGATGCAGGCAGAGCCTCCAATTGGAGTCTATCTCC...CCTTAGCGATACTTTCATTCTGAGTGGATCTGCTTTTGTGGAGTGGGAAGGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000013995.13
CDS-3UTR CAA 90 bp CAGTCAGGGGTTCTGGATAAACAGGTGACCATTCTGATAGGTCAGTTTTGCCATGCTGCAAGGCTGGCCTaGGAAAACAAAGTACTGAGC +
Preference number: 5 (lower is better)
Translates to: QSGVLDKQVTILIGQFCHAARLA*ENKVLS
Trigger: GCTCAGTACTTTGTTTTCCAAGGCCAGCCTTGCAGC...ATGGCAAAACTGACCTATCAGAATGGTCACCTGTTTATCCAGAACCCCTGACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000013995.13
CDS-3UTR CAA 90 bp GTTCTGGATAAACAGGTGACCATTCTGATAGGTCAGTTTTGCCATCAGGAGTTCGTGCCAAAGCAGTTCTaGAGGAAGAGCGGGGTTCCA +
Preference number: 5 (lower is better)
Translates to: VLDKQVTILIGQFCHQEFVPKQF*RKSGVP
Trigger: TGGAACCCCGCTCTTCCTCAAGAACTGCTTTGGCAC...GAACTCCTGATGGCAAAACTGACCTATCAGAATGGTCACCTGTTTATCCAGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000013995.13
CDS-3UTR CAA 90 bp TTCCCACTCCACAAAAGCAGATCCACTCAGAATGAAAGTATCGCTAAGGCCAAATGCATTCCACCAGCTTaGCCTCTGGGACATGGTGGT +
Preference number: 5 (lower is better)
Translates to: FPLHKSRSTQNESIAKAKCIPPA*PLGHGG
Trigger: ACCACCATGTCCCAGAGGCAAAGCTGGTGGAATGCA...TTTGGCCTTAGCGATACTTTCATTCTGAGTGGATCTGCTTTTGTGGAGTGGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR CAA 90 bp CAGTCAGGGGTTCTGGATAAACAGGTGACCATTCTGATAGGTCAGTTTTGCCATTCCTTTAGACAACGGTaGCCAAAGCCTGGCCTGTTC +
Preference number: 5 (lower is better)
Translates to: QSGVLDKQVTILIGQFCHSFRQR*PKPGLF
Trigger: GAACAGGCCAGGCTTTGGCAACCGTTGTCTAAAGGA...ATGGCAAAACTGACCTATCAGAATGGTCACCTGTTTATCCAGAACCCCTGACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR CAA 90 bp CACACATCCATACCCTTCCCACTCCACAAAAGCAGATCCACTCAGAATGAAAGTTCCTTTAGACAACGGTaGCCAAAGCCTGGCCTGTTC +
Preference number: 5 (lower is better)
Translates to: HTSIPFPLHKSRSTQNESSFRQR*PKPGLF
Trigger: GAACAGGCCAGGCTTTGGCAACCGTTGTCTAAAGGA...ACTTTCATTCTGAGTGGATCTGCTTTTGTGGAGTGGGAAGGGTATGGATGTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS CCA 90 bp ATGTCCCTCCAGTCAAAGCTGGTCATATCATCAGCCTGCTTCTCTTaGGGACCGTTAGAGAAGAAGTTTAATACGGCTTCGGTGGTAATG +
Preference number: 5 (lower is better)
Translates to: MSLQSKLVISSACFS*GPLEKKFNTASVVM
Trigger: CATTACCACCGAAGCCGTATTAAACTTCTTCTCTAACGGTCCCCAAGAGAAGCAGGCTGATGATATGACCAGCTTTGACTGGAGGGACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000013995.13
CDS-3UTR CAA 90 bp ACAAAAGCAGATCCACTCAGAATGAAAGTATCGCTAAGGCCAAAGCCACCAGTCGAAGGCATCGCCTTGTaGGGAAAATGGCATTCATGC +
Preference number: 5 (lower is better)
Translates to: TKADPLRMKVSLRPKPPVEGIAL*GKWHSC
Trigger: GCATGAATGCCATTTTCCCAACAAGGCGATGCCTTC...GACTGGTGGCTTTGGCCTTAGCGATACTTTCATTCTGAGTGGATCTGCTTTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000013995.13
CDS-3UTR CAA 90 bp AAAGCAGATCCACTCAGAATGAAAGTATCGCTAAGGCCAAAGCCACCAGTCAGGCAAGGGTTGTTCATATaGCAGAAAATCCCCTGGAGC +
Preference number: 5 (lower is better)
Translates to: KADPLRMKVSLRPKPPVRQGLFI*QKIPWS
Trigger: GCTCCAGGGGATTTTCTGCAATATGAACAACCCTTG...CCTGACTGGTGGCTTTGGCCTTAGCGATACTTTCATTCTGAGTGGATCTGCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000013995.13
CDS-3UTR CAA 90 bp TCAGGGGTTCTGGATAAACAGGTGACCATTCTGATAGGTCAGTTTTGCCATCAGATCAGCCTGCTTCTCTaGGGGACCGTTAGAGAAGAA +
Preference number: 5 (lower is better)
Translates to: SGVLDKQVTILIGQFCHQISLLL*GTVREE
Trigger: TTCTTCTCTAACGGTCCCCAAGAGAAGCAGGCTGAT...CTGATGGCAAAACTGACCTATCAGAATGGTCACCTGTTTATCCAGAACCCCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000013995.13
CDS-3UTR CAA 90 bp CTCCACAAAAGCAGATCCACTCAGAATGAAAGTATCGCTAAGGCCAAAGCCACCGCTGAAGAAGGTATATaGATGCCCATACATCCAGGG +
Preference number: 5 (lower is better)
Translates to: LHKSRSTQNESIAKAKATAEEGI*MPIHPG
Trigger: CCCTGGATGTATGGGCATCAATATACCTTCTTCAGC...GGTGGCTTTGGCCTTAGCGATACTTTCATTCTGAGTGGATCTGCTTTTGTGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR CAA 90 bp ACAAAAGCAGATCCACTCAGAATGAAAGTATCGCTAAGGCCAAAGCCACCAGTCTCCCCAGTGAGCATCTaGAATGTGGTGGTTTTGCCT +
Preference number: 5 (lower is better)
Translates to: TKADPLRMKVSLRPKPPVSPVSI*NVVVLP
Trigger: AGGCAAAACCACCACATTCAAGATGCTCACTGGGGA...GACTGGTGGCTTTGGCCTTAGCGATACTTTCATTCTGAGTGGATCTGCTTTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR CAA 90 bp CAGTCAGGGGTTCTGGATAAACAGGTGACCATTCTGATAGGTCAGTTTTGCCATAGCACATGGAAGAGTTaGAAGAAGTCCACATCGGCA +
Preference number: 5 (lower is better)
Translates to: QSGVLDKQVTILIGQFCHSTWKS*KKSTSA
Trigger: TGCCGATGTGGACTTCTTCAAACTCTTCCATGTGCT...ATGGCAAAACTGACCTATCAGAATGGTCACCTGTTTATCCAGAACCCCTGACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000013995.13
CDS-3UTR CAA 90 bp CCCACACATCCATACCCTTCCCACTCCACAAAAGCAGATCCACTCAGAATGAAAAATCGGTCAGTGATGTaGAATATGTCCCTCCAGTCA +
Preference number: 5 (lower is better)
Translates to: PTHPYPSHSTKADPLRMKNRSVM*NMSLQS
Trigger: TGACTGGAGGGACATATTCAACATCACTGACCGATT...TTTCATTCTGAGTGGATCTGCTTTTGTGGAGTGGGAAGGGTATGGATGTGTGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000013995.13
CDS-3UTR CAA 90 bp CTCCACAAAAGCAGATCCACTCAGAATGAAAGTATCGCTAAGGCCAAAGCCACCCGTACTACATCCAGGTaGGTTTCAATGTCTTTTCCC +
Preference number: 5 (lower is better)
Translates to: LHKSRSTQNESIAKAKATRTTSR*VSMSFP
Trigger: GGGAAAAGACATTGAAACCAACCTGGATGTAGTACG...GGTGGCTTTGGCCTTAGCGATACTTTCATTCTGAGTGGATCTGCTTTTGTGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000013995.13
CDS-3UTR CAA 90 bp AAAGCAGATCCACTCAGAATGAAAGTATCGCTAAGGCCAAAGCCACCAGTCAGGGAGGAAGATAAGTTCTaGACCAATGCATTCCACCAG +
Preference number: 5 (lower is better)
Translates to: KADPLRMKVSLRPKPPVREEDKF*TNAFHQ
Trigger: CTGGTGGAATGCATTGGTCAAGAACTTATCTTCCTC...CCTGACTGGTGGCTTTGGCCTTAGCGATACTTTCATTCTGAGTGGATCTGCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR CAA 90 bp CCACTCAGAATGAAAGTATCGCTAAGGCCAAAGCCACCAGTCAGGGGTTCTGGACTCTGCTTGAAATTCTaGTTTGGAAGGAGGAAGATA +
Preference number: 5 (lower is better)
Translates to: PLRMKVSLRPKPPVRGSGLCLKF*FGRRKI
Trigger: TATCTTCCTCCTTCCAAACAAGAATTTCAAGCAGAG...TCCAGAACCCCTGACTGGTGGCTTTGGCCTTAGCGATACTTTCATTCTGAGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR CAA 90 bp CACACATCCATACCCTTCCCACTCCACAAAAGCAGATCCACTCAGAATGAAAGTGCTGAAGAAGGTATATaGATGCCCATACATCCAGGG +
Preference number: 5 (lower is better)
Translates to: HTSIPFPLHKSRSTQNESAEEGI*MPIHPG
Trigger: CCCTGGATGTATGGGCATCAATATACCTTCTTCAGC...ACTTTCATTCTGAGTGGATCTGCTTTTGTGGAGTGGGAAGGGTATGGATGTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR CAA 90 bp ACAGGTGACCATTCTGATAGGTCAGTTTTGCCATCAGGAGTTCCGGTGAGCCAGTCATTGACCCAGAATTaGCTCTTTAAGCTGCTTCTT +
Preference number: 5 (lower is better)
Translates to: TGDHSDRSVLPSGVPVSQSLTQN*LFKLLL
Trigger: AAGAAGCAGCTTAAAGAGCAAATTCTGGGTCAATGA...CTGGCTCACCGGAACTCCTGATGGCAAAACTGACCTATCAGAATGGTCACCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR CAA 90 bp ACAGGTGACCATTCTGATAGGTCAGTTTTGCCATCAGGAGTTCCGGTGAGCCAGTGTGTAGGCTTTCTTTaGAAATCCAATGAAGATGCC +
Preference number: 5 (lower is better)
Translates to: TGDHSDRSVLPSGVPVSQCVGFL*KSNEDA
Trigger: GGCATCTTCATTGGATTTCAAAAGAAAGCCTACACA...CTGGCTCACCGGAACTCCTGATGGCAAAACTGACCTATCAGAATGGTCACCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR CAA 90 bp ACACATCCATACCCTTCCCACTCCACAAAAGCAGATCCACTCAGAATGAAAGTATCCCCAGTGAGCATCTaGAATGTGGTGGTTTTGCCT +
Preference number: 5 (lower is better)
Translates to: THPYPSHSTKADPLRMKVSPVSI*NVVVLP
Trigger: AGGCAAAACCACCACATTCAAGATGCTCACTGGGGA...TACTTTCATTCTGAGTGGATCTGCTTTTGTGGAGTGGGAAGGGTATGGATGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR CAA 90 bp ACAAAAGCAGATCCACTCAGAATGAAAGTATCGCTAAGGCCAAAGCCACCAGTCTCTCCAAACTTGTACTaGAGGTGTTGGATGGTACCC +
Preference number: 5 (lower is better)
Translates to: TKADPLRMKVSLRPKPPVSPNLY*RCWMVP
Trigger: GGGTACCATCCAACACCTCAAGTACAAGTTTGGAGA...GACTGGTGGCTTTGGCCTTAGCGATACTTTCATTCTGAGTGGATCTGCTTTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS GCA 90 bp ATGTTGAATATGTCCCTCCAGTCAAAGCTGGTCATATCATCAGCCTaGTTCTCTTGGGGACCGTTAGAGAAGAAGTTTAATACGGCTTCG +
Preference number: 5 (lower is better)
Translates to: MLNMSLQSKLVISSA*FSWGPLEKKFNTAS
Trigger: CGAAGCCGTATTAAACTTCTTCTCTAACGGTCCCCAAGAGAAGCAGGCTGATGATATGACCAGCTTTGACTGGAGGGACATATTCAACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000013995.13
CDS CCA 90 bp GGATTTTTCCCATCAGCAATGGCTTTGCCGCCCTCCAGGCTATTTTaGTTAAAGGGTTTGACTCCAGGCTCTGGATCAATGAATTACAAA +
Preference number: 5 (lower is better)
Translates to: GFFPSAMALPPSRLF*LKGLTPGSGSMNYK
Trigger: TTTGTAATTCATTGATCCAGAGCCTGGAGTCAAACCCTTTAACCAAAATAGCCTGGAGGGCGGCAAAGCCATTGCTGATGGGAAAAATCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000013995.13
CDS-3UTR CAA 90 bp CAGAATGAAAGTATCGCTAAGGCCAAAGCCACCAGTCAGGGGTTCTGGATAAACTGGAGTTGTTATAGTTaGAGACAGTTCCAGGAGACT +
Preference number: 5 (lower is better)
Translates to: QNESIAKAKATSQGFWINWSCYS*RQFQET
Trigger: AGTCTCCTGGAACTGTCTCAAACTATAACAACTCCA...GTTTATCCAGAACCCCTGACTGGTGGCTTTGGCCTTAGCGATACTTTCATTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000013995.13
CDS-3UTR CAA 90 bp ACAGGTGACCATTCTGATAGGTCAGTTTTGCCATCAGGAGTTCCGGTGAGCCAGGTCCATGAAGAGTTCTaGAAAATCTCGATATACTCT +
Preference number: 5 (lower is better)
Translates to: TGDHSDRSVLPSGVPVSQVHEEF*KISIYS
Trigger: AGAGTATATCGAGATTTTCAAGAACTCTTCATGGAC...CTGGCTCACCGGAACTCCTGATGGCAAAACTGACCTATCAGAATGGTCACCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000013995.13
CDS-3UTR CAA 90 bp AAAGCAGATCCACTCAGAATGAAAGTATCGCTAAGGCCAAAGCCACCAGTCAGGGCATATGCTCTCTGCTaGAAATTCTTGTTTGGAAGG +
Preference number: 5 (lower is better)
Translates to: KADPLRMKVSLRPKPPVRAYALC*KFLFGR
Trigger: CCTTCCAAACAAGAATTTCAAGCAGAGAGCATATGC...CCTGACTGGTGGCTTTGGCCTTAGCGATACTTTCATTCTGAGTGGATCTGCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR CAA 90 bp CCCACACATCCATACCCTTCCCACTCCACAAAAGCAGATCCACTCAGAATGAAAGCATATGCTCTCTGCTaGAAATTCTTGTTTGGAAGG +
Preference number: 5 (lower is better)
Translates to: PTHPYPSHSTKADPLRMKAYALC*KFLFGR
Trigger: CCTTCCAAACAAGAATTTCAAGCAGAGAGCATATGC...TTTCATTCTGAGTGGATCTGCTTTTGTGGAGTGGGAAGGGTATGGATGTGTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR CAA 90 bp CCCACACATCCATACCCTTCCCACTCCACAAAAGCAGATCCACTCAGAATGAAACCATACCTCTGTTCATaGACCCAGAATTTGCTCTTT +
Preference number: 5 (lower is better)
Translates to: PTHPYPSHSTKADPLRMKPYLCS*TQNLLF
Trigger: AAAGAGCAAATTCTGGGTCAATGAACAGAGGTATGG...TTTCATTCTGAGTGGATCTGCTTTTGTGGAGTGGGAAGGGTATGGATGTGTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR CAA 90 bp CAGAATGAAAGTATCGCTAAGGCCAAAGCCACCAGTCAGGGGTTCTGGATAAACCCATACCTCTGTTCATaGACCCAGAATTTGCTCTTT +
Preference number: 5 (lower is better)
Translates to: QNESIAKAKATSQGFWINPYLCS*TQNLLF
Trigger: AAAGAGCAAATTCTGGGTCAATGAACAGAGGTATGG...GTTTATCCAGAACCCCTGACTGGTGGCTTTGGCCTTAGCGATACTTTCATTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR CAA 90 bp GTCAGTTTTGCCATCAGGAGTTCCGGTGAGCCAGTGAATTTTGGTTTCTTTCTGAAATCTAACATTTCTTaGGAGGCCTCCCTGGTGACA +
Preference number: 5 (lower is better)
Translates to: VSFAIRSSGEPVNFGFFLKSNIS*EASLVT
Trigger: TGTCACCAGGGAGGCCTCCAAAGAAATGTTAGATTT...CAGAAAGAAACCAAAATTCACTGGCTCACCGGAACTCCTGATGGCAAAACTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR CAA 90 bp CACACATCCATACCCTTCCCACTCCACAAAAGCAGATCCACTCAGAATGAAAGTAAATCTAACATTTCTTaGGAGGCCTCCCTGGTGACA +
Preference number: 5 (lower is better)
Translates to: HTSIPFPLHKSRSTQNESKSNIS*EASLVT
Trigger: TGTCACCAGGGAGGCCTCCAAAGAAATGTTAGATTT...ACTTTCATTCTGAGTGGATCTGCTTTTGTGGAGTGGGAAGGGTATGGATGTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS TCA 90 bp ATGAAGAGTCAAAGCTGGAAATTCACCAAACGGAGGCACAATGATTaGAAGCATCAGAGCCAAGAACACGAAAGTGGCAGGGAGAACAAT +
Preference number: 5 (lower is better)
Translates to: MKSQSWKFTKRRHND*KHQSQEHESGRENN
Trigger: ATTGTTCTCCCTGCCACTTTCGTGTTCTTGGCTCTGATGCTTTCAATCATTGTGCCTCCGTTTGGTGAATTTCCAGCTTTGACTCTTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS CCA 90 bp CACATAACCGATCTACTGCTGGACTGGAAGAGCCTGAGTAAACCTTaGTTAGTTCGTTTAGCTTTAAGATGTCGGTTTTATTTCCCCCAC +
Preference number: 5 (lower is better)
Translates to: HITDLLLDWKSLSKP*LVRLALRCRFYFPH
Trigger: GTGGGGGAAATAAAACCGACATCTTAAAGCTAAACGAACTAACCAAGGTTTACTCAGGCTCTTCCAGTCCAGCAGTAGATCGGTTATGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR CAA 90 bp CACAAAAGCAGATCCACTCAGAATGAAAGTATCGCTAAGGCCAAAGCCACCAGTCTGTCTTTGATCTTATaGGTCTTCTCCACCACATCT +
Preference number: 5 (lower is better)
Translates to: HKSRSTQNESIAKAKATSLSLIL*VFSTTS
Trigger: AGATGTGGTGGAGAAGACCAATAAGATCAAAGACAG...ACTGGTGGCTTTGGCCTTAGCGATACTTTCATTCTGAGTGGATCTGCTTTTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000013995.13
CDS-3UTR CAA 90 bp GTTCTGGATAAACAGGTGACCATTCTGATAGGTCAGTTTTGCCATCAGGAGTTCTCCCAGTACCTGTCTTaGATCTTATTGGTCTTCTCC +
Preference number: 5 (lower is better)
Translates to: VLDKQVTILIGQFCHQEFSQYLS*ILLVFS
Trigger: GGAGAAGACCAATAAGATCAAAGACAGGTACTGGGA...GAACTCCTGATGGCAAAACTGACCTATCAGAATGGTCACCTGTTTATCCAGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000013995.13
CDS-3UTR CAA 90 bp GTTCTGGATAAACAGGTGACCATTCTGATAGGTCAGTTTTGCCATCAGGAGTTCAGCATTAGAGACGCCTaGGTTTTTCAAGGTCTCCTT +
Preference number: 5 (lower is better)
Translates to: VLDKQVTILIGQFCHQEFSIRDA*VFQGLL
Trigger: AAGGAGACCTTGAAAAACCAAGGCGTCTCTAATGCT...GAACTCCTGATGGCAAAACTGACCTATCAGAATGGTCACCTGTTTATCCAGAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000013995.13
CDS-3UTR CAA 90 bp CTCCACAAAAGCAGATCCACTCAGAATGAAAGTATCGCTAAGGCCAAAGCCACCCTCTGCTTGAAATTCTaGTTTGGAAGGAGGAAGATA +
Preference number: 5 (lower is better)
Translates to: LHKSRSTQNESIAKAKATLCLKF*FGRRKI
Trigger: TATCTTCCTCCTTCCAAACAAGAATTTCAAGCAGAG...GGTGGCTTTGGCCTTAGCGATACTTTCATTCTGAGTGGATCTGCTTTTGTGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR CAA 90 bp ACCCACACATCCATACCCTTCCCACTCCACAAAAGCAGATCCACTCAGAATGAATCATTGACCCAGAATTaGCTCTTTAAGCTGCTTCTT +
Preference number: 5 (lower is better)
Translates to: THTSIPFPLHKSRSTQNESLTQN*LFKLLL
Trigger: AAGAAGCAGCTTAAAGAGCAAATTCTGGGTCAATGA...TTCATTCTGAGTGGATCTGCTTTTGTGGAGTGGGAAGGGTATGGATGTGTGGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR CAA 90 bp AAAGCAGATCCACTCAGAATGAAAGTATCGCTAAGGCCAAAGCCACCAGTCAGGTGTGTAGGCTTTCTTTaGAAATCCAATGAAGATGCC +
Preference number: 5 (lower is better)
Translates to: KADPLRMKVSLRPKPPVRCVGFL*KSNEDA
Trigger: GGCATCTTCATTGGATTTCAAAAGAAAGCCTACACA...CCTGACTGGTGGCTTTGGCCTTAGCGATACTTTCATTCTGAGTGGATCTGCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS CCA 90 bp GAAGAACTGCTCCACAGGATTCAAATCGGGAAGCAAGTCGTCCTTTaGAGATTTGATTTTCATTGTGACAATGTAGCCGTCTCCAAACTT +
Preference number: 5 (lower is better)
Translates to: EELLHRIQIGKQVVL*RFDFHCDNVAVSKL
Trigger: AAGTTTGGAGACGGCTACATTGTCACAATGAAAATCAAATCTCCAAAGGACGACTTGCTTCCCGATTTGAATCCTGTGGAGCAGTTCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS-3UTR CAA 90 bp GTTCTGGATAAACAGGTGACCATTCTGATAGGTCAGTTTTGCCATCAGGAGTTCATCTCCATCCAGGACTaGTTCTTCTGTTATCTCATC +
Preference number: 5 (lower is better)
Translates to: VLDKQVTILIGQFCHQEFISIQD*FFCYLI
Trigger: GATGAGATAACAGAAGAACAAGTCCTGGATGGAGAT...GAACTCCTGATGGCAAAACTGACCTATCAGAATGGTCACCTGTTTATCCAGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000013995.13
CDS TCA 72 bp GCCCTCCAGCACCCTCGGGGCACTCGGGCAACATGGTaGGCTTCTCTCTGGTGCTGCACTTGCAGGAGGGAG +
Preference number: 6 (lower is better)
Translates to: ALQHPRGTRATW*ASLWCCTCRRE
Trigger: CTCCCTCCTGCAAGTGCAGCACCAGAGAGAAGCTCACCATGTTGCCCGAGTGCCCCGAGGGTGCTGGAGGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS GCA 72 bp CTGGGAGAGGGGACACAGGGCATCGCGTACCGTCTGTaGCCCCCGACGCTGGCTGAAGATGATGAAGCGCTG +
Preference number: 6 (lower is better)
Translates to: LGEGTQGIAYRL*PPTLAEDDEAL
Trigger: CAGCGCTTCATCATCTTCAGCCAGCGTCGGGGGGCACAGACGGTACGCGATGCCCTGTGTCCCCTCTCCCAG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000013995.13
CDS GCA 72 bp TGGCCAGGGAGGACGAGGGGACCTGGAACTGGAGCATaGTGTGGTGTCTCTCCCTCTGCACGCTGCCAGGGA +
Preference number: 6 (lower is better)
Translates to: WPGRTRGPGTGA*CGVSPSARCQG
Trigger: TCCCTGGCAGCGTGCAGAGGGAGAGACACCACAGCATGCTCCAGTTCCAGGTCCCCTCGTCCTCCCTGGCCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS CAA 90 bp GGCAAAGGCTCCTGTGTCTGCAGCCGTCCGGATTTCTCTTCAAGCTaGGCTTGCCAGCTGGCTCCAGCAGCCCGGGGGTGCAGAGGGAGG +
Preference number: 6 (lower is better)
Translates to: GKGSCVCSRPDFSSS*ACQLAPAARGCRGR
Trigger: CCTCCCTCTGCACCCCCGGGCTGCTGGAGCCAGCTGGCAAGCCAAGCTTGAAGAGAAATCCGGACGGCTGCAGACACAGGAGCCTTTGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS CCA 72 bp CCGAGCACCTGTGTTGAATGGGACACCGGGGTCCTCTaGCTCTGGGGAAGGTTGGCCCTTGGGAGGATCCAC +
Preference number: 6 (lower is better)
Translates to: PSTCVEWDTGVL*LWGRLALGRIH
Trigger: GTGGATCCTCCCAAGGGCCAACCTTCCCCAGAGCCAGAGGACCCCGGTGTCCCATTCAACACAGGTGCTCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS CCA 72 bp GCCGTCCGGATTTCTCTTCAAGCTTGGCTTGCCAGCTaGCTCCAGCAGCCCGGGGGTGCAGAGGGAGGTCAT +
Preference number: 6 (lower is better)
Translates to: AVRISLQAWLAS*LQQPGGAEGGH
Trigger: ATGACCTCCCTCTGCACCCCCGGGCTGCTGGAGCCAGCTGGCAAGCCAAGCTTGAAGAGAAATCCGGACGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS CAA 72 bp TGTCTGCAGCCGTCCGGATTTCTCTTCAAGCTTGGCTaGCCAGCTGGCTCCAGCAGCCCGGGGGTGCAGAGG +
Preference number: 6 (lower is better)
Translates to: CLQPSGFLFKLG*PAGSSSPGVQR
Trigger: CCTCTGCACCCCCGGGCTGCTGGAGCCAGCTGGCAAGCCAAGCTTGAAGAGAAATCCGGACGGCTGCAGACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS CAA 72 bp TCCTGTGTCTGCAGCCGTCCGGATTTCTCTTCAAGCTaGGCTTGCCAGCTGGCTCCAGCAGCCCGGGGGTGC +
Preference number: 6 (lower is better)
Translates to: SCVCSRPDFSSS*ACQLAPAARGC
Trigger: GCACCCCCGGGCTGCTGGAGCCAGCTGGCAAGCCAAGCTTGAAGAGAAATCCGGACGGCTGCAGACACAGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS CAA 90 bp AGGCTCCTGTGTCTGCAGCCGTCCGGATTTCTCTTCAAGCTTGGCTaGCCAGCTGGCTCCAGCAGCCCGGGGGTGCAGAGGGAGGTCATA +
Preference number: 6 (lower is better)
Translates to: RLLCLQPSGFLFKLG*PAGSSSPGVQREVI
Trigger: TATGACCTCCCTCTGCACCCCCGGGCTGCTGGAGCCAGCTGGCAAGCCAAGCTTGAAGAGAAATCCGGACGGCTGCAGACACAGGAGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS CCA 72 bp ATGAACTGCGACAAGGTGCGGAGCTCGGCCCAAACCTaGCCAAGGTGCTGGACCTCCGGGGTGTCCATGAAG +
Preference number: 6 (lower is better)
Translates to: MNCDKVRSSAQT*PRCWTSGVSMK
Trigger: CTTCATGGACACCCCGGAGGTCCAGCACCTTGGCCAGGTTTGGGCCGAGCTCCGCACCTTGTCGCAGTTCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000013995.13
CDS TCA 72 bp GGGCTGCTGTCCATTTCTGCTTCTGGAACAGGTGGGTaGTGTTCGGGGACACGGAGGGCGTCTTCCAGGAGG +
Preference number: 6 (lower is better)
Translates to: GLLSISASGTGG*CSGTRRASSRR
Trigger: CCTCCTGGAAGACGCCCTCCGTGTCCCCGAACATCACCCACCTGTTCCAGAAGCAGAAATGGACAGCAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS GCA 72 bp CGTGGGGTTGCTTCCGTTAGCCAGTTGTTCAGATCCTaGGGGCAAAGGCTCCTGTGTCTGCAGCCGTCCGGA +
Preference number: 6 (lower is better)
Translates to: RGVASVSQLFRS*GQRLLCLQPSG
Trigger: TCCGGACGGCTGCAGACACAGGAGCCTTTGCCCGCAGGATCTGAACAACTGGCTAACGGAAGCAACCCCACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS CCA 72 bp TCGGTGGCAACAGTCCTGTCAGGATGGACAAGGTGGTaGTCTTTCCCGCTCCGTTGTGACCCAGGAACGCCG +
Preference number: 6 (lower is better)
Translates to: SVATVLSGWTRW*SFPLRCDPGTP
Trigger: CGGCGTTCCTGGGTCACAACGGAGCGGGAAAGACCACCACCTTGTCCATCCTGACAGGACTGTTGCCACCGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000013995.13
CDS CCA 72 bp ACCTGTGTTGAATGGGACACCGGGGTCCTCTGGCTCTaGGGAAGGTTGGCCCTTGGGAGGATCCACTTGTCC +
Preference number: 6 (lower is better)
Translates to: TCVEWDTGVLWL*GRLALGRIHLS
Trigger: GGACAAGTGGATCCTCCCAAGGGCCAACCTTCCCCAGAGCCAGAGGACCCCGGTGTCCCATTCAACACAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS CCA 72 bp GGGTGGGCTGCTGTCCATTTCTGCTTCTGGAACAGGTaGGTGATGTTCGGGGACACGGAGGGCGTCTTCCAG +
Preference number: 6 (lower is better)
Translates to: GWAAVHFCFWNR*VMFGDTEGVFQ
Trigger: CTGGAAGACGCCCTCCGTGTCCCCGAACATCACCCACCTGTTCCAGAAGCAGAAATGGACAGCAGCCCACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS CCA 72 bp TCGATGAGCAGGCTGTCCTTGTGGGAAATGAGCAGCTaGAAGATCCTGGCCAGGGAGGACGAGGGGACCTGG +
Preference number: 6 (lower is better)
Translates to: SMSRLSLWEMSS*KILAREDEGTW
Trigger: CCAGGTCCCCTCGTCCTCCCTGGCCAGGATCTTCCAGCTGCTCATTTCCCACAAGGACAGCCTGCTCATCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS GCA 72 bp ACTGGAGCATGCTGTGGTGTCTCTCCCTCTGCACGCTaGCAGGGAAGTTGCCCTGGAAGAACTGCTCCACAG +
Preference number: 6 (lower is better)
Translates to: TGACCGVSPSAR*QGSCPGRTAPQ
Trigger: CTGTGGAGCAGTTCTTCCAGGGCAACTTCCCTGGCAGCGTGCAGAGGGAGAGACACCACAGCATGCTCCAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS CCA 72 bp ACGTCGGTGGCAACAGTCCTGTCAGGATGGACAAGGTaGTGGTCTTTCCCGCTCCGTTGTGACCCAGGAACG +
Preference number: 6 (lower is better)
Translates to: TSVATVLSGWTR*WSFPLRCDPGT
Trigger: CGTTCCTGGGTCACAACGGAGCGGGAAAGACCACCACCTTGTCCATCCTGACAGGACTGTTGCCACCGACGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000013995.13
CDS CCA 72 bp GGATCCACTTGTCCTGGGGAACAGGTATGTGGGGCCTaGGCATACTGCCTGAGCTTCTCAGTGGGAGCCGAA +
Preference number: 6 (lower is better)
Translates to: GSTCPGEQVCGA*AYCLSFSVGAE
Trigger: TTCGGCTCCCACTGAGAAGCTCAGGCAGTATGCCCAGGCCCCACATACCTGTTCCCCAGGACAAGTGGATCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS CAA 90 bp CCTGAGCTTCTCAGTGGGAGCCGAACAAGGGTGCCGGAGACCGGCTaGTTCTCTTTTCTGCTGAGCGCCACCTACAAACATAGAGCCCGC +
Preference number: 6 (lower is better)
Translates to: PELLSGSRTRVPETG*FSFLLSATYKHRAR
Trigger: GCGGGCTCTATGTTTGTAGGTGGCGCTCAGCAGAAAAGAGAACAAGCCGGTCTCCGGCACCCTTGTTCGGCTCCCACTGAGAAGCTCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS CAA 90 bp AGCGTGGTCTGGGTGACTGAGTACTCCTCGATGAGCAGGCTGTCCTaGTGGGAAATGAGCAGCTGGAAGATCCTGGCCAGGGAGGACGAG +
Preference number: 6 (lower is better)
Translates to: SVVWVTEYSSMSRLS*WEMSSWKILAREDE
Trigger: CTCGTCCTCCCTGGCCAGGATCTTCCAGCTGCTCATTTCCCACAAGGACAGCCTGCTCATCGAGGAGTACTCAGTCACCCAGACCACGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS TCA 72 bp CTGCAAATCTCTCAGGGTGAGTCCTCAGGGTGTCCATaGACTGCGACAAGGTGCGGAGCTCGGCCCAAACCT +
Preference number: 6 (lower is better)
Translates to: LQISQGESSGCP*TATRCGARPKP
Trigger: AGGTTTGGGCCGAGCTCCGCACCTTGTCGCAGTTCATGGACACCCTGAGGACTCACCCTGAGAGATTTGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000013995.13
CDS TCA 72 bp CATCGGCATACAGAGTGTCTTCTATCCACTGTAGGGTaGCCTGGGAGAGGGGACACAGGGCATCGCGTACCG +
Preference number: 6 (lower is better)
Translates to: HRHTECLLSTVG*PGRGDTGHRVP
Trigger: CGGTACGCGATGCCCTGTGTCCCCTCTCCCAGGTCACCCTACAGTGGATAGAAGACACTCTGTATGCCGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000013995.13
CDS TCA 72 bp CAAGGGTGCCGGAGACCGGCTTGTTCTCTTTTCTGCTaGGCGCCACCTACAAACATAGAGCCCGCTCCAGCA +
Preference number: 6 (lower is better)
Translates to: QGCRRPACSLFC*APPTNIEPAPA
Trigger: TGCTGGAGCGGGCTCTATGTTTGTAGGTGGCGCTCAGCAGAAAAGAGAACAAGCCGGTCTCCGGCACCCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS GCA 72 bp CTCTTCCCAATGTTGCTCCATTGCAGCCCCAGGCCTTaGTCCTCAAAGCGGACCAGGTACTCGGTGCCAAAC +
Preference number: 6 (lower is better)
Translates to: LFPMLLHCSPRP*SSKRTRYSVPN
Trigger: GTTTGGCACCGAGTACCTGGTCCGCTTTGAGGAGCAAGGCCTGGGGCTGCAATGGAGCAACATTGGGAAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000013995.13
CDS GCA 72 bp CTCTGCACGCTGCCAGGGAAGTTGCCCTGGAAGAACTaGTCCACAGGATTCAAATCGGGAAGCAAGTCGTCC +
Preference number: 6 (lower is better)
Translates to: LCTLPGKLPWKN*STGFKSGSKSS
Trigger: GGACGACTTGCTTCCCGATTTGAATCCTGTGGAGCAGTTCTTCCAGGGCAACTTCCCTGGCAGCGTGCAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS CCA 72 bp GCATACAGAGTGTCTTCTATCCACTGTAGGGTGACCTaGGAGAGGGGACACAGGGCATCGCGTACCGTCTGT +
Preference number: 6 (lower is better)
Translates to: AYRVSSIHCRVT*ERGHRASRTVC
Trigger: ACAGACGGTACGCGATGCCCTGTGTCCCCTCTCCCAGGTCACCCTACAGTGGATAGAAGACACTCTGTATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000013995.13
CDS CCA 72 bp CATTCCTCTTATGGTGGAGGCCCGTGTCTTCTAGCATaGCTTCCATCTCAAGCTGGGCCTCCTCCCAGGATC +
Preference number: 6 (lower is better)
Translates to: HSSYGGGPCLLA*LPSQAGPPPRI
Trigger: GATCCTGGGAGGAGGCCCAGCTTGAGATGGAAGCCATGCTAGAAGACACGGGCCTCCACCATAAGAGGAATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000013995.13
CDS CCA 72 bp TCCCTGGTGACAGGACCCCCGCTCACGTTCATCATCTaGCCAAGGCCACTTAGAAAGCCAACAAGTGCTTCC +
Preference number: 6 (lower is better)
Translates to: SLVTGPPLTFII*PRPLRKPTSAS
Trigger: GGAAGCACTTGTTGGCTTTCTAAGTGGCCTTGGCCAGATGATGAACGTGAGCGGGGGTCCTGTCACCAGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS CCA 72 bp AGTGCCAGGTCAATGAGGCCCCTGCCCAGGCAGAAGTaGGGGAAGACAATGAGCAACTTCCTCAACATGGCA +
Preference number: 6 (lower is better)
Translates to: SARSMRPLPRQK*GKTMSNFLNMA
Trigger: TGCCATGTTGAGGAAGTTGCTCATTGTCTTCCCCCACTTCTGCCTGGGCAGGGGCCTCATTGACCTGGCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS CCA 72 bp GATACCCCAGTTGGCAACCTTCTCGATTTCCTTCGATaGCACGCCCCGCAGCCTGGCATAGAGGTAAAGGTG +
Preference number: 6 (lower is better)
Translates to: DTPVGNLLDFLR*HAPQPGIEVKV
Trigger: CACCTTTACCTCTATGCCAGGCTGCGGGGCGTGCCATCGAAGGAAATCGAGAAGGTTGCCAACTGGGGTATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS CAA 72 bp ACTCTTCCCAATGTTGCTCCATTGCAGCCCCAGGCCTaGCTCCTCAAAGCGGACCAGGTACTCGGTGCCAAA +
Preference number: 6 (lower is better)
Translates to: TLPNVAPLQPQA*LLKADQVLGAK
Trigger: TTTGGCACCGAGTACCTGGTCCGCTTTGAGGAGCAAGGCCTGGGGCTGCAATGGAGCAACATTGGGAAGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000013995.13
CDS CAA 72 bp CTCAGTGGGAGCCGAACAAGGGTGCCGGAGACCGGCTaGTTCTCTTTTCTGCTGAGCGCCACCTACAAACAT +
Preference number: 6 (lower is better)
Translates to: LSGSRTRVPETG*FSFLLSATYKH
Trigger: ATGTTTGTAGGTGGCGCTCAGCAGAAAAGAGAACAAGCCGGTCTCCGGCACCCTTGTTCGGCTCCCACTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS TCA 72 bp ATCGACTCGGGTTGGACACCTGGTAGAGAAACCCTTTaGTGTACAGCTGCAGACCCCCTCACAGCCACCTCT +
Preference number: 6 (lower is better)
Translates to: IDSGWTPGRETL*CTAADPLTATS
Trigger: AGAGGTGGCTGTGAGGGGGTCTGCAGCTGTACATCAAAGGGTTTCTCTACCAGGTGTCCAACCCGAGTCGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000013995.13
CDS TCA 72 bp AGTCCTTGCGGCTGCGGATGGTGTGATGGAATCGCTTaGCTAGCAGGGCCTGCACATGTTGAAGAATCAGCC +
Preference number: 6 (lower is better)
Translates to: SPCGCGWCDGIA*LAGPAHVEESA
Trigger: GGCTGATTCTTCAACATGTGCAGGCCCTGCTAGTCAAGCGATTCCATCACACCATCCGCAGCCGCAAGGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS TCA 72 bp GTTTACAAACACCTGGTCCAGCGTGGTCTGGGTGACTaGGTACTCCTCGATGAGCAGGCTGTCCTTGTGGGA +
Preference number: 6 (lower is better)
Translates to: VYKHLVQRGLGD*VLLDEQAVLVG
Trigger: TCCCACAAGGACAGCCTGCTCATCGAGGAGTACTCAGTCACCCAGACCACGCTGGACCAGGTGTTTGTAAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS CCA 72 bp TCCGAATCTTGTACTTCACATGAGGAGGTAAGGAGCTaGCCCAGGGATACATGCCAGGGAACACCACTCCGG +
Preference number: 6 (lower is better)
Translates to: SESCTSHEEVRS*PRDTCQGTPLR
Trigger: CCGGAGTGGTGTTCCCTGGCATGTATCCCTGGGCCAGCTCCTTACCTCCTCATGTGAAGTACAAGATTCGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000013995.13
CDS CAA 72 bp GGGTACTCCGGAAGCCACTCTTCCTTTAGACAACGGTaGCCAAAGCCTGGCCTGTTCAGAAGGACATCTGCC +
Preference number: 6 (lower is better)
Translates to: GYSGSHSSFRQR*PKPGLFRRTSA
Trigger: GGCAGATGTCCTTCTGAACAGGCCAGGCTTTGGCAACCGTTGTCTAAAGGAAGAGTGGCTTCCGGAGTACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS GCA 72 bp CCGAGCTGCCTATTTATGAAGTCTTTGACGGTTGGGTaGTGCAGGGTGTCTCGGATCACGGTCATCTGTGTG +
Preference number: 6 (lower is better)
Translates to: PSCLFMKSLTVG*CRVSRITVICV
Trigger: CACACAGATGACCGTGATCCGAGACACCCTGCAGCACCCAACCGTCAAAGACTTCATAAATAGGCAGCTCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000013995.13
CDS GCA 72 bp GGTACTCCGGAAGCCACTCTTCCTTTAGACAACGGTTaGCAAAGCCTGGCCTGTTCAGAAGGACATCTGCCA +
Preference number: 6 (lower is better)
Translates to: GTPEATLPLDNG*QSLACSEGHLP
Trigger: TGGCAGATGTCCTTCTGAACAGGCCAGGCTTTGGCAACCGTTGTCTAAAGGAAGAGTGGCTTCCGGAGTACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS CCA 72 bp GGCCTCGCTGCAGGCAATGTCTGTCAGTTCCAAGTCTaGGACTCCATAAGCAAACTGCTCCACACGAACTTG +
Preference number: 6 (lower is better)
Translates to: GLAAGNVCQFQV*DSISKLLHTNL
Trigger: CAAGTTCGTGTGGAGCAGTTTGCTTATGGAGTCCCAGACTTGGAACTGACAGACATTGCCTGCAGCGAGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000013995.13
CDS CCA 72 bp TTAGCGAAGTTTACAAACACCTGGTCCAGCGTGGTCTaGGTGACTGAGTACTCCTCGATGAGCAGGCTGTCC +
Preference number: 6 (lower is better)
Translates to: LAKFTNTWSSVV*VTEYSSMSRLS
Trigger: GGACAGCCTGCTCATCGAGGAGTACTCAGTCACCCAGACCACGCTGGACCAGGTGTTTGTAAACTTCGCTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS CAA 90 bp GCATCCACGGAAGTAGTCAGTACTGTGATGTCCGAGAGCTGCTCCTaGGTCAGGTTCAGAGGCTGGCTGATGACAGTGATTCCATACTCC +
Preference number: 6 (lower is better)
Translates to: ASTEVVSTVMSESCS*VRFRGWLMTVIPYS
Trigger: GGAGTATGGAATCACTGTCATCAGCCAGCCTCTGAACCTGACCAAGGAGCAGCTCTCGGACATCACAGTACTGACTACTTCCGTGGATGC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS TCA 72 bp CTCCATAAGCAAACTGCTCCACACGAACTTGGGAGTTaGCCAGAAGATGGGCAACCGAGTCAGACAGGCCAA +
Preference number: 6 (lower is better)
Translates to: LHKQTAPHELGS*PEDGQPSQTGQ
Trigger: TTGGCCTGTCTGACTCGGTTGCCCATCTTCTGGTCAACTCCCAAGTTCGTGTGGAGCAGTTTGCTTATGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000013995.13
CDS GCA 72 bp AGCTGCCTATTTATGAAGTCTTTGACGGTTGGGTGCTaGAGGGTGTCTCGGATCACGGTCATCTGTGTGCTC +
Preference number: 6 (lower is better)
Translates to: SCLFMKSLTVGC*RVSRITVICVL
Trigger: GAGCACACAGATGACCGTGATCCGAGACACCCTGCAGCACCCAACCGTCAAAGACTTCATAAATAGGCAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000013995.13
CDS GCA 72 bp CAGGTTCTTCCCAATCAGGTCCCACTGGAATGGGTTTaGAGAGTACTCCTCACCAAACTGGGCATAGACGTC +
Preference number: 6 (lower is better)
Translates to: QVLPNQVPLEWV*RVLLTKLGIDV
Trigger: GACGTCTATGCCCAGTTTGGTGAGGAGTACTCTGCAAACCCATTCCAGTGGGACCTGATTGGGAAGAACCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS CCA 72 bp TTCTCCGAGCTGCCTATTTATGAAGTCTTTGACGGTTaGGTGCTGCAGGGTGTCTCGGATCACGGTCATCTG +
Preference number: 6 (lower is better)
Translates to: FSELPIYEVFDG*VLQGVSDHGHL
Trigger: CAGATGACCGTGATCCGAGACACCCTGCAGCACCCAACCGTCAAAGACTTCATAAATAGGCAGCTCGGAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000013995.13
CDS CCA 72 bp GTTCTCATAGAAAGTGATGTTCAGACGGTCCACAGCTaGCCGGCCACTGGGCTCAAAAACCTTCACCAGGTT +
Preference number: 6 (lower is better)
Translates to: VLIESDVQTVHS*PATGLKNLHQV
Trigger: AACCTGGTGAAGGTTTTTGAGCCCAGTGGCCGGCCAGCTGTGGACCGTCTGAACATCACTTTCTATGAGAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000013995.13
CDS CCA 72 bp GCCATAGCAACCAGGTTCTTCCCAATCAGGTCCCACTaGAATGGGTTTGCAGAGTACTCCTCACCAAACTGG +
Preference number: 6 (lower is better)
Translates to: AIATRFFPIRSH*NGFAEYSSPNW
Trigger: CCAGTTTGGTGAGGAGTACTCTGCAAACCCATTCCAGTGGGACCTGATTGGGAAGAACCTGGTTGCTATGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS CAA 72 bp GTCTGGGACTCCATAAGCAAACTGCTCCACACGAACTaGGGAGTTGACCAGAAGATGGGCAACCGAGTCAGA +
Preference number: 6 (lower is better)
Translates to: VWDSISKLLHTN*GVDQKMGNRVR
Trigger: TCTGACTCGGTTGCCCATCTTCTGGTCAACTCCCAAGTTCGTGTGGAGCAGTTTGCTTATGGAGTCCCAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000013995.13
CDS CAA 72 bp ATGCCTTCTTCTCCGAGCTGCCTATTTATGAAGTCTTaGACGGTTGGGTGCTGCAGGGTGTCTCGGATCACG +
Preference number: 6 (lower is better)
Translates to: MPSSPSCLFMKS*TVGCCRVSRIT
Trigger: CGTGATCCGAGACACCCTGCAGCACCCAACCGTCAAAGACTTCATAAATAGGCAGCTCGGAGAAGAAGGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000013995.13
CDS CAA 72 bp CCAGGTTCTTCCCAATCAGGTCCCACTGGAATGGGTTaGCAGAGTACTCCTCACCAAACTGGGCATAGACGT +
Preference number: 6 (lower is better)
Translates to: PGSSQSGPTGMG*QSTPHQTGHRR
Trigger: ACGTCTATGCCCAGTTTGGTGAGGAGTACTCTGCAAACCCATTCCAGTGGGACCTGATTGGGAAGAACCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS CAA 90 bp TCGGTGGTAATGCCTTCTTCTCCGAGCTGCCTATTTATGAAGTCTTaGACGGTTGGGTGCTGCAGGGTGTCTCGGATCACGGTCATCTGT +
Preference number: 6 (lower is better)
Translates to: SVVMPSSPSCLFMKS*TVGCCRVSRITVIC
Trigger: ACAGATGACCGTGATCCGAGACACCCTGCAGCACCCAACCGTCAAAGACTTCATAAATAGGCAGCTCGGAGAAGAAGGCATTACCACCGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000013995.13
CDS CAA 90 bp CACTCCGGCCCAGAACCTGTTCTCCTCCAGGAGAGACAGGGCTCGTaGGGTGAGCTGCACTTCATCATCATAACTTTCAAACTTATCCAG +
Preference number: 6 (lower is better)
Translates to: HSGPEPVLLQERQGS*GELHFIIITFKLIQ
Trigger: CTGGATAAGTTTGAAAGTTATGATGATGAAGTGCAGCTCACCCAACGAGCCCTGTCTCTCCTGGAGGAGAACAGGTTCTGGGCCGGAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000013995.13
CDS CAA 90 bp AGAGACGAGAGCAGGAAGGTTGTCTGGGGATGTGTAGGCTTTCTTTaGAAATCCAATGAAGATGCCCACCACCAATCCCGCACTCACAGC +
Preference number: 6 (lower is better)
Translates to: RDESRKVVWGCVGFL*KSNEDAHHQSRTHS
Trigger: GCTGTGAGTGCGGGATTGGTGGTGGGCATCTTCATTGGATTTCAAAAGAAAGCCTACACATCCCCAGACAACCTTCCTGCTCTCGTCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS TCA 72 bp GGTTTCAATGTCTTTTCCCCCAATGAGCACAGTTCCTaGCGTCGGTGGCAACAGTCCTGTCAGGATGGACAA +
Preference number: 6 (lower is better)
Translates to: GFNVFSPNEHSS*RRWQQSCQDGQ
Trigger: TTGTCCATCCTGACAGGACTGTTGCCACCGACGTCAGGAACTGTGCTCATTGGGGGAAAAGACATTGAAACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000013995.13
CDS GCA 72 bp GAGCAGGGTCAGAAGGAAGTATACCACCCCTTCTATTaGCATAGCAACCAGGTTCTTCCCAATCAGGTCCCA +
Preference number: 6 (lower is better)
Translates to: EQGQKEVYHPFY*HSNQVLPNQVP
Trigger: TGGGACCTGATTGGGAAGAACCTGGTTGCTATGGCAATAGAAGGGGTGGTATACTTCCTTCTGACCCTGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS CCA 72 bp GCCACGGTAACAGTCCTGCTGAAGGCATCGCCTTGTTaGGAAAATGGCATTCATGCTGACTATAGAGTGGGT +
Preference number: 6 (lower is better)
Translates to: ATVTVLLKASPC*ENGIHADYRVG
Trigger: ACCCACTCTATAGTCAGCATGAATGCCATTTTCCCAACAAGGCGATGCCTTCAGCAGGACTGTTACCGTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000013995.13
CDS CCA 72 bp AACTGCTCCACACGAACTTGGGAGTTGACCAGAAGATaGGCAACCGAGTCAGACAGGCCAATGTTTCTCATG +
Preference number: 6 (lower is better)
Translates to: NCSTRTWELTRR*ATESDRPMFLM
Trigger: CATGAGAAACATTGGCCTGTCTGACTCGGTTGCCCATCTTCTGGTCAACTCCCAAGTTCGTGTGGAGCAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000013995.13
CDS CCA 72 bp CCATCAGCAATGGCTTTGCCGCCCTCCAGGCTATTTTaGTTAAAGGGTTTGACTCCAGGCTCTGGATCAATG +
Preference number: 6 (lower is better)
Translates to: PSAMALPPSRLF*LKGLTPGSGSM
Trigger: CATTGATCCAGAGCCTGGAGTCAAACCCTTTAACCAAAATAGCCTGGAGGGCGGCAAAGCCATTGCTGATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000013995.13
CDS CCA 72 bp CCAATGCATTCCACCAGCTTTGCCTCTGGGACATGGTaGTATACCAAATCCATCAGCTCCTGCACATCTCCA +
Preference number: 6 (lower is better)
Translates to: PMHSTSFASGTW*YTKSISSCTSP
Trigger: TGGAGATGTGCAGGAGCTGATGGATTTGGTATACCACCATGTCCCAGAGGCAAAGCTGGTGGAATGCATTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000013995.13
CDS CCA 72 bp AGCAACCAGGTTCTTCCCAATCAGGTCCCACTGGAATaGGTTTGCAGAGTACTCCTCACCAAACTGGGCATA +
Preference number: 6 (lower is better)
Translates to: SNQVLPNQVPLE*VCRVLLTKLGI
Trigger: TATGCCCAGTTTGGTGAGGAGTACTCTGCAAACCCATTCCAGTGGGACCTGATTGGGAAGAACCTGGTTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS CAA 72 bp CCCATCAGCAATGGCTTTGCCGCCCTCCAGGCTATTTaGGTTAAAGGGTTTGACTCCAGGCTCTGGATCAAT +
Preference number: 6 (lower is better)
Translates to: PISNGFAALQAI*VKGFDSRLWIN
Trigger: ATTGATCCAGAGCCTGGAGTCAAACCCTTTAACCAAAATAGCCTGGAGGGCGGCAAAGCCATTGCTGATGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000013995.13
CDS CAA 72 bp GAAGTAGTCAGTACTGTGATGTCCGAGAGCTGCTCCTaGGTCAGGTTCAGAGGCTGGCTGATGACAGTGATT +
Preference number: 6 (lower is better)
Translates to: EVVSTVMSESCS*VRFRGWLMTVI
Trigger: AATCACTGTCATCAGCCAGCCTCTGAACCTGACCAAGGAGCAGCTCTCGGACATCACAGTACTGACTACTTC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS CAA 90 bp GCTATCCAGGAACCAGGTACACCAGATGACAGCATTAGAGACGCCTaGGTTTTTCAAGGTCTCCTTCAGCCTCAGCTCCTTCTCCAAAAC +
Preference number: 6 (lower is better)
Translates to: AIQEPGTPDDSIRDA*VFQGLLQPQLLLQN
Trigger: GTTTTGGAGAAGGAGCTGAGGCTGAAGGAGACCTTGAAAAACCAAGGCGTCTCTAATGCTGTCATCTGGTGTACCTGGTTCCTGGATAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000013995.13
CDS CAA 90 bp TTAATGCATGGGTACTCCGGAAGCCACTCTTCCTTTAGACAACGGTaGCCAAAGCCTGGCCTGTTCAGAAGGACATCTGCCAGTACTTCA +
Preference number: 6 (lower is better)
Translates to: LMHGYSGSHSSFRQR*PKPGLFRRTSASTS
Trigger: TGAAGTACTGGCAGATGTCCTTCTGAACAGGCCAGGCTTTGGCAACCGTTGTCTAAAGGAAGAGTGGCTTCCGGAGTACCCATGCATTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS TCA 72 bp AAACCTGGCCAAGGTGCTGGACCTCCGGGGTGTCCATaGAGAGTTCTTGAAAATCTCGATATACTCTTGCCA +
Preference number: 6 (lower is better)
Translates to: KPGQGAGPPGCP*RVLENLDILLP
Trigger: TGGCAAGAGTATATCGAGATTTTCAAGAACTCTTCATGGACACCCCGGAGGTCCAGCACCTTGGCCAGGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000013995.13
CDS TCA 72 bp ACGTTTTTACCAAGTAGTCGGAGATGTTCCTGTTCGTaGGGTCTTGTAGGACTTCAGTGCTGCGCTGTGTCC +
Preference number: 6 (lower is better)
Translates to: TFLPSSRRCSCS*GLVGLQCCAVS
Trigger: GGACACAGCGCAGCACTGAAGTCCTACAAGACCTCACGAACAGGAACATCTCCGACTACTTGGTAAAAACGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS CAA 72 bp CCAGAACCTGTTCTCCTCCAGGAGAGACAGGGCTCGTaGGGTGAGCTGCACTTCATCATCATAACTTTCAAA +
Preference number: 6 (lower is better)
Translates to: PEPVLLQERQGS*GELHFIIITFK
Trigger: TTTGAAAGTTATGATGATGAAGTGCAGCTCACCCAACGAGCCCTGTCTCTCCTGGAGGAGAACAGGTTCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000013995.13
CDS CAA 72 bp GAACCAGGTACACCAGATGACAGCATTAGAGACGCCTaGGTTTTTCAAGGTCTCCTTCAGCCTCAGCTCCTT +
Preference number: 6 (lower is better)
Translates to: EPGTPDDSIRDA*VFQGLLQPQLL
Trigger: AAGGAGCTGAGGCTGAAGGAGACCTTGAAAAACCAAGGCGTCTCTAATGCTGTCATCTGGTGTACCTGGTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000013995.13
CDS CAA 72 bp AGCAGGAAGGTTGTCTGGGGATGTGTAGGCTTTCTTTaGAAATCCAATGAAGATGCCCACCACCAATCCCGC +
Preference number: 6 (lower is better)
Translates to: SRKVVWGCVGFL*KSNEDAHHQSR
Trigger: GCGGGATTGGTGGTGGGCATCTTCATTGGATTTCAAAAGAAAGCCTACACATCCCCAGACAACCTTCCTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS TCA 72 bp TGTCTGGGGATGTGTAGGCTTTCTTTTGAAATCCAATaGAGATGCCCACCACCAATCCCGCACTCACAGCAT +
Preference number: 6 (lower is better)
Translates to: CLGMCRLSFEIQ*RCPPPIPHSQH
Trigger: ATGCTGTGAGTGCGGGATTGGTGGTGGGCATCTTCATTGGATTTCAAAAGAAAGCCTACACATCCCCAGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS GCA 72 bp CACAGCCACCTCTTTGGCTCTGGATGTTTTTCATCTTaGGAACTAAGGTCAAGTAGAAGCCTGTGCCAAAGC +
Preference number: 6 (lower is better)
Translates to: HSHLFGSGCFSS*ELRSSRSLCQS
Trigger: GCTTTGGCACAGGCTTCTACTTGACCTTAGTTCGCAAGATGAAAAACATCCAGAGCCAAAGAGGTGGCTGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000013995.13
CDS GCA 72 bp AAACAGGAAGGATGCTGGATACATCATAGGAATGACTaGCCATCCATACAGCATGAGCAGAGAGACGAGAGC +
Preference number: 6 (lower is better)
Translates to: KQEGCWIHHRND*PSIQHEQRDES
Trigger: GCTCTCGTCTCTCTGCTCATGCTGTATGGATGGGCAGTCATTCCTATGATGTATCCAGCATCCTTCCTGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS CCA 72 bp TTAAGGGTTCAGTCTTTTCCAGAGCCCTTTCTTCTCTaGTCGAACAACCTTCACCACCAAGCCAGTAGGACT +
Preference number: 6 (lower is better)
Translates to: LRVQSFPEPFLL*SNNLHHQASRT
Trigger: AGTCCTACTGGCTTGGTGGTGAAGGTTGTTCGACCAGAGAAGAAAGGGCTCTGGAAAAGACTGAACCCTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000013995.13
CDS CCA 72 bp AAGTTCTTGACCAATGCATTCCACCAGCTTTGCCTCTaGGACATGGTGGTATACCAAATCCATCAGCTCCTG +
Preference number: 6 (lower is better)
Translates to: KFLTNAFHQLCL*DMVVYQIHQLL
Trigger: CAGGAGCTGATGGATTTGGTATACCACCATGTCCCAGAGGCAAAGCTGGTGGAATGCATTGGTCAAGAACTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000013995.13
CDS CAA 72 bp CTCGATATACTCTTGCCAAGATGGAGTTGTTATAGTTaGAGACAGTTCCAGGAGACTCTCCAGGGGTGGGGT +
Preference number: 6 (lower is better)
Translates to: LDILLPRWSCYS*RQFQETLQGWG
Trigger: ACCCCACCCCTGGAGAGTCTCCTGGAACTGTCTCAAACTATAACAACTCCATCTTGGCAAGAGTATATCGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000013995.13
CDS CAA 90 bp ATGTTGTCTGTGGTTTCAAGATGTTTGAGGAAATCTAACATTTCTTaGGAGGCCTCCCTGGTGACAGGACCCCCGCTCACGTTCATCATC +
Preference number: 6 (lower is better)
Translates to: MLSVVSRCLRKSNIS*EASLVTGPPLTFII
Trigger: GATGATGAACGTGAGCGGGGGTCCTGTCACCAGGGAGGCCTCCAAAGAAATGTTAGATTTCCTCAAACATCTTGAAACCACAGACAACAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS CAA 90 bp AACCTGGCCAAGGTGCTGGACCTCCGGGGTGTCCATGAAGAGTTCTaGAAAATCTCGATATACTCTTGCCAAGATGGAGTTGTTATAGTT +
Preference number: 6 (lower is better)
Translates to: NLAKVLDLRGVHEEF*KISIYSCQDGVVIV
Trigger: AACTATAACAACTCCATCTTGGCAAGAGTATATCGAGATTTTCAAGAACTCTTCATGGACACCCCGGAGGTCCAGCACCTTGGCCAGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000013995.13
CDS TCA 72 bp TCGATATACTCTTGCCAAGATGGAGTTGTTATAGTTTaGGACAGTTCCAGGAGACTCTCCAGGGGTGGGGTT +
Preference number: 6 (lower is better)
Translates to: SIYSCQDGVVIV*DSSRRLSRGGV
Trigger: AACCCCACCCCTGGAGAGTCTCCTGGAACTGTCTCAAACTATAACAACTCCATCTTGGCAAGAGTATATCGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000013995.13
CDS TCA 72 bp CAAAGCTGGAAATTCACCAAACGGAGGCACAATGATTaGAAGCATCAGAGCCAAGAACACGAAAGTGGCAGG +
Preference number: 6 (lower is better)
Translates to: QSWKFTKRRHND*KHQSQEHESGR
Trigger: CCTGCCACTTTCGTGTTCTTGGCTCTGATGCTTTCAATCATTGTGCCTCCGTTTGGTGAATTTCCAGCTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS CCA 72 bp CAGTCAAAGCTGGTCATATCATCAGCCTGCTTCTCTTaGGGACCGTTAGAGAAGAAGTTTAATACGGCTTCG +
Preference number: 6 (lower is better)
Translates to: QSKLVISSACFS*GPLEKKFNTAS
Trigger: CGAAGCCGTATTAAACTTCTTCTCTAACGGTCCCCAAGAGAAGCAGGCTGATGATATGACCAGCTTTGACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000013995.13
CDS CAA 72 bp AAGGTGCTGGACCTCCGGGGTGTCCATGAAGAGTTCTaGAAAATCTCGATATACTCTTGCCAAGATGGAGTT +
Preference number: 6 (lower is better)
Translates to: KVLDLRGVHEEF*KISIYSCQDGV
Trigger: AACTCCATCTTGGCAAGAGTATATCGAGATTTTCAAGAACTCTTCATGGACACCCCGGAGGTCCAGCACCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000013995.13
CDS CAA 72 bp GCTTTGCCGCCCTCCAGGCTATTTTGGTTAAAGGGTTaGACTCCAGGCTCTGGATCAATGAATTACAAAAGG +
Preference number: 6 (lower is better)
Translates to: ALPPSRLFWLKG*TPGSGSMNYKR
Trigger: CCTTTTGTAATTCATTGATCCAGAGCCTGGAGTCAAACCCTTTAACCAAAATAGCCTGGAGGGCGGCAAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000013995.13
CDS CAA 90 bp TCAGCAATGGCTTTGCCGCCCTCCAGGCTATTTTGGTTAAAGGGTTaGACTCCAGGCTCTGGATCAATGAATTACAAAAGGATGTTGTTC +
Preference number: 6 (lower is better)
Translates to: SAMALPPSRLFWLKG*TPGSGSMNYKRMLF
Trigger: GAACAACATCCTTTTGTAATTCATTGATCCAGAGCCTGGAGTCAAACCCTTTAACCAAAATAGCCTGGAGGGCGGCAAAGCCATTGCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000013995.13
CDS CAA 90 bp AGGATTTTTCCCATCAGCAATGGCTTTGCCGCCCTCCAGGCTATTTaGGTTAAAGGGTTTGACTCCAGGCTCTGGATCAATGAATTACAA +
Preference number: 6 (lower is better)
Translates to: RIFPISNGFAALQAI*VKGFDSRLWINELQ
Trigger: TTGTAATTCATTGATCCAGAGCCTGGAGTCAAACCCTTTAACCAAAATAGCCTGGAGGGCGGCAAAGCCATTGCTGATGGGAAAAATCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000013995.13
CDS GCA 72 bp ATGTCCCTCCAGTCAAAGCTGGTCATATCATCAGCCTaGTTCTCTTGGGGACCGTTAGAGAAGAAGTTTAAT +
Preference number: 6 (lower is better)
Translates to: MSLQSKLVISSA*FSWGPLEKKFN
Trigger: ATTAAACTTCTTCTCTAACGGTCCCCAAGAGAAGCAGGCTGATGATATGACCAGCTTTGACTGGAGGGACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000013995.13
CDS GCA 72 bp GAAGATAAGTTCTTGACCAATGCATTCCACCAGCTTTaGCTCTGGGACATGGTGGTATACCAAATCCATCAG +
Preference number: 6 (lower is better)
Translates to: EDKFLTNAFHQL*LWDMVVYQIHQ
Trigger: CTGATGGATTTGGTATACCACCATGTCCCAGAGGCAAAGCTGGTGGAATGCATTGGTCAAGAACTTATCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000013995.13
CDS CCA 72 bp GGCATTCTTCATTATCCTTCGAGCAGCAGGGGAATCTaGAGTAAAGAGGATTTTTCCCATCAGCAATGGCTT +
Preference number: 6 (lower is better)
Translates to: GILHYPSSSRGI*SKEDFSHQQWL
Trigger: AAGCCATTGCTGATGGGAAAAATCCTCTTTACTCCAGATTCCCCTGCTGCTCGAAGGATAATGAAGAATGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000013995.13
CDS CAA 72 bp TGGGGGAAGACAATGAGCAACTTCCTCAACATGGCATaGAACCTGAGCAGCGTCCGGTTATTCTCAAATAAT +
Preference number: 6 (lower is better)
Translates to: WGKTMSNFLNMA*NLSSVRLFSNN
Trigger: ATTATTTGAGAATAACCGGACGCTGCTCAGGTTCAATGCCATGTTGAGGAAGTTGCTCATTGTCTTCCCCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS CAA 72 bp TCCAGCTCTCGGAAAAGGCTGGCATATGCTCTCTGCTaGAAATTCTTGTTTGGAAGGAGGAAGATAAGTTCT +
Preference number: 6 (lower is better)
Translates to: SSSRKRLAYALC*KFLFGRRKISS
Trigger: AGAACTTATCTTCCTCCTTCCAAACAAGAATTTCAAGCAGAGAGCATATGCCAGCCTTTTCCGAGAGCTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS CAA 72 bp TTCATTGTTGGGTTCGTCCATGCTGAAGAAGGTATATaGATGCCCATACATCCAGGGATGAAGAGTCAAAGC +
Preference number: 6 (lower is better)
Translates to: FIVGFVHAEEGI*MPIHPGMKSQS
Trigger: GCTTTGACTCTTCATCCCTGGATGTATGGGCATCAATATACCTTCTTCAGCATGGACGAACCCAACAATGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS CAA 90 bp TTCAAGGTGTTCATTGTTGGGTTCGTCCATGCTGAAGAAGGTATATaGATGCCCATACATCCAGGGATGAAGAGTCAAAGCTGGAAATTC +
Preference number: 6 (lower is better)
Translates to: FKVFIVGFVHAEEGI*MPIHPGMKSQSWKF
Trigger: GAATTTCCAGCTTTGACTCTTCATCCCTGGATGTATGGGCATCAATATACCTTCTTCAGCATGGACGAACCCAACAATGAACACCTTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS CCA 72 bp TGGGAAAATGGCATTCATGCTGACTATAGAGTGGGTTaGCATTCCTCAGCCAGATTAACACCAAAAACAAAG +
Preference number: 6 (lower is better)
Translates to: WENGIHADYRVG*HSSARLTPKTK
Trigger: CTTTGTTTTTGGTGTTAATCTGGCTGAGGAATGCCAACCCACTCTATAGTCAGCATGAATGCCATTTTCCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000013995.13
CDS CAA 72 bp GAAATTCCTCCATACCTCTGTTCATTGACCCAGAATTaGCTCTTTAAGCTGCTTCTTATGAGAGCAGGGTAC +
Preference number: 6 (lower is better)
Translates to: EIPPYLCSLTQN*LFKLLLMRAGY
Trigger: GTACCCTGCTCTCATAAGAAGCAGCTTAAAGAGCAAATTCTGGGTCAATGAACAGAGGTATGGAGGAATTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS CCA 72 bp GATCTACTGCTGGACTGGAAGAGCCTGAGTAAACCTTaGTTAGTTCGTTTAGCTTTAAGATGTCGGTTTTAT +
Preference number: 6 (lower is better)
Translates to: DLLLDWKSLSKP*LVRLALRCRFY
Trigger: ATAAAACCGACATCTTAAAGCTAAACGAACTAACCAAGGTTTACTCAGGCTCTTCCAGTCCAGCAGTAGATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5
CDS CAA 90 bp TTGTTGTTAAACCATACCTTAATGTTGTCTGTGGTTTCAAGATGTTaGAGGAAATCTAACATTTCTTTGGAGGCCTCCCTGGTGACAGGA +
Preference number: 6 (lower is better)
Translates to: LLLNHTLMLSVVSRC*RKSNISLEASLVTG
Trigger: TCCTGTCACCAGGGAGGCCTCCAAAGAAATGTTAGATTTCCTCAAACATCTTGAAACCACAGACAACATTAAGGTATGGTTTAACAACAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000013995.13
ENSMUST00000141135.5