RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ABCA2 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000026944

Ensembl transcript IDs: ENSMUST00000102919.4

Found 483 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCAGGGCCAGGCCAGCCTTTGGCACAATTCGGGGAGGATGGTAGTTaGGAGGAGGGCAGGAGCCCTTTGGTCCTGAACCTGCCTTTCCAG +
Preference number: 1 (lower is better)
Translates to: PGPGQPLAQFGEDGS*EEGRSPLVLNLPFQ
Trigger: CTGGAAAGGCAGGTTCAGGACCAAAGGGCTCCTGCCCTCCTCCCAACTACCATCCTCCCCGAATTGTGCCAAAGGCTGGCCTGGCCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
3UTR CCA 90 bp ATATACAAAGTCCTGCTCCCATGTGGGTGGCAGGAAGGGCCAAGCTaGACGGGAGAGCAAAGGCAGATTGAGGGGGTAGGGAGGGAACAG +
Preference number: 1 (lower is better)
Translates to: IYKVLLPCGWQEGPS*TGEQRQIEGVGREQ
Trigger: CTGTTCCCTCCCTACCCCCTCAATCTGCCTTTGCTCTCCCGTCCAGCTTGGCCCTTCCTGCCACCCACATGGGAGCAGGACTTTGTATAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
3UTR CCA 90 bp CAGTCAAGGGTGTCCATGAAAAGACATCTGTGCAAGATGCTGGCCTaGGTAGACTTGCGGCCGCTGCAGAGAAGAGTCACAGGATACTTG +
Preference number: 1 (lower is better)
Translates to: QSRVSMKRHLCKMLA*VDLRPLQRRVTGYL
Trigger: CAAGTATCCTGTGACTCTTCTCTGCAGCGGCCGCAAGTCTACCCAGGCCAGCATCTTGCACAGATGTCTTTTCATGGACACCCTTGACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
3UTR-3UTR CCA 90 bp GCCCAGCTTCTCCGTTCCTGTCATTCCACCAGGGCTGAGGCAGCCACATTCACGGGGGAGGATGGTAGTTaGGAGGAGGGCAGGAGCCCT +
Preference number: 2 (lower is better)
Translates to: AQLLRSCHSTRAEAATFTGEDGS*EEGRSP
Trigger: AGGGCTCCTGCCCTCCTCCCAACTACCATCCTCCCC...CGTGAATGTGGCTGCCTCAGCCCTGGTGGAATGACAGGAACGGAGAAGCTGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
3UTR-3UTR CCA 90 bp CAAGCCCAGCTTCTCCGTTCCTGTCATTCCACCAGGGCTGAGGCAGCCACATTCGGCAGGGTAAGGGGCTaGGCCAGGACCCAAGGCTTT +
Preference number: 2 (lower is better)
Translates to: QAQLLRSCHSTRAEAATFGRVRG*ARTQGF
Trigger: AAAGCCTTGGGTCCTGGCCCAGCCCCTTACCCTGCC...GAATGTGGCTGCCTCAGCCCTGGTGGAATGACAGGAACGGAGAAGCTGGGCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
3UTR-3UTR GCA 90 bp GCCCAGCTTCTCCGTTCCTGTCATTCCACCAGGGCTGAGGCAGCCACATTCACGTCTGCCCCACACAGCTaGATCCCTGATGTGGCTCTT +
Preference number: 2 (lower is better)
Translates to: AQLLRSCHSTRAEAATFTSAPHS*IPDVAL
Trigger: AAGAGCCACATCAGGGATGCAGCTGTGTGGGGCAGA...CGTGAATGTGGCTGCCTCAGCCCTGGTGGAATGACAGGAACGGAGAAGCTGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
3UTR CAA 90 bp GTGTCCATGAAAAGACATCTGTGCAAGATGCTGGCCTGGGTAGACTaGCGGCCGCTGCAGAGAAGAGTCACAGGATACTTGGGGCAGCCC +
Preference number: 2 (lower is better)
Translates to: VSMKRHLCKMLAWVD*RPLQRRVTGYLGQP
Trigger: GGGCTGCCCCAAGTATCCTGTGACTCTTCTCTGCAGCGGCCGCAAGTCTACCCAGGCCAGCATCTTGCACAGATGTCTTTTCATGGACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
3UTR CCA 72 bp GTCCTGCTCCCATGTGGGTGGCAGGAAGGGCCAAGCTaGACGGGAGAGCAAAGGCAGATTGAGGGGGTAGGG +
Preference number: 3 (lower is better)
Translates to: VLLPCGWQEGPS*TGEQRQIEGVG
Trigger: CCCTACCCCCTCAATCTGCCTTTGCTCTCCCGTCCAGCTTGGCCCTTCCTGCCACCCACATGGGAGCAGGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
3UTR CCA 72 bp GTGAGGGTATGTGCAGCCCAGGGCCAGGCCAGCCTTTaGCACAATTCGGGGAGGATGGTAGTTGGGAGGAGG +
Preference number: 3 (lower is better)
Translates to: VRVCAAQGQASL*HNSGRMVVGRR
Trigger: CCTCCTCCCAACTACCATCCTCCCCGAATTGTGCCAAAGGCTGGCCTGGCCCTGGGCTGCACATACCCTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
3UTR CCA 72 bp GGCCAGCCTTTGGCACAATTCGGGGAGGATGGTAGTTaGGAGGAGGGCAGGAGCCCTTTGGTCCTGAACCTG +
Preference number: 3 (lower is better)
Translates to: GQPLAQFGEDGS*EEGRSPLVLNL
Trigger: CAGGTTCAGGACCAAAGGGCTCCTGCCCTCCTCCCAACTACCATCCTCCCCGAATTGTGCCAAAGGCTGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
3UTR CCA 72 bp ACTTGCGGCCGCTGCAGAGAAGAGTCACAGGATACTTaGGGCAGCCCATGTCACCCTGGGAAGGTGGATGGT +
Preference number: 3 (lower is better)
Translates to: TCGRCREESQDT*GSPCHPGKVDG
Trigger: ACCATCCACCTTCCCAGGGTGACATGGGCTGCCCCAAGTATCCTGTGACTCTTCTCTGCAGCGGCCGCAAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
3UTR GCA 72 bp CAACTGCAGTCAAGGGTGTCCATGAAAAGACATCTGTaGAAGATGCTGGCCTGGGTAGACTTGCGGCCGCTG +
Preference number: 3 (lower is better)
Translates to: QLQSRVSMKRHL*KMLAWVDLRPL
Trigger: CAGCGGCCGCAAGTCTACCCAGGCCAGCATCTTGCACAGATGTCTTTTCATGGACACCCTTGACTGCAGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
3UTR CCA 72 bp ACATCTGTGTGCTATATACAAAGTCCTGCTCCCATGTaGGTGGCAGGAAGGGCCAAGCTGGACGGGAGAGCA +
Preference number: 3 (lower is better)
Translates to: TSVCYIQSPAPM*VAGRAKLDGRA
Trigger: TGCTCTCCCGTCCAGCTTGGCCCTTCCTGCCACCCACATGGGAGCAGGACTTTGTATATAGCACACAGATGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
3UTR CCA 72 bp GTGTCCATGAAAAGACATCTGTGCAAGATGCTGGCCTaGGTAGACTTGCGGCCGCTGCAGAGAAGAGTCACA +
Preference number: 3 (lower is better)
Translates to: VSMKRHLCKMLA*VDLRPLQRRVT
Trigger: TGTGACTCTTCTCTGCAGCGGCCGCAAGTCTACCCAGGCCAGCATCTTGCACAGATGTCTTTTCATGGACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR CCA 90 bp GCCCAGGGCCAGGCCAGCCTTTGGCACAATTCGGGGAGGATGGTAGTTGGGAGGATGCCCGGAGCTCTGTaGGTGCGGGGCGGGGCCTCA +
Preference number: 4 (lower is better)
Translates to: AQGQASLWHNSGRMVVGRMPGAL*VRGGAS
Trigger: TGAGGCCCCGCCCCGCACCCACAGAGCTCCGGGCAT...CCTCCCAACTACCATCCTCCCCGAATTGTGCCAAAGGCTGGCCTGGCCCTGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR TCA 90 bp ACTAGGGGCCACGGCCACCGCCTGACATCTGCCCCACACAGCTGCATCCCTGATCAGAGCCTCGAGCTCTaGGCCCAGGCTGGGTCGCAC +
Preference number: 4 (lower is better)
Translates to: TRGHGHRLTSAPHSCIPDQSLEL*AQAGSH
Trigger: GTGCGACCCAGCCTGGGCTCAGAGCTCGAGGCTCTG...ATCAGGGATGCAGCTGTGTGGGGCAGATGTCAGGCGGTGGCCGTGGCCCCTAGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR TCA 90 bp ACCCAAGGCTTTAAGGCAAAGCAGGGTGAGGGTATGTGCAGCCCAGGGCCAGGCCCAGGTGCCAGGGCCTaGGCTGAGGGCCTCCAGACG +
Preference number: 4 (lower is better)
Translates to: TQGFKAKQGEGMCSPGPGPGARA*AEGLQT
Trigger: CGTCTGGAGGCCCTCAGCTCAGGCCCTGGCACCTGG...GCCTGGCCCTGGGCTGCACATACCCTCACCCTGCTTTGCCTTAAAGCCTTGGGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR CCA 90 bp CCCAAGGCTTTAAGGCAAAGCAGGGTGAGGGTATGTGCAGCCCAGGGCCAGGCCCCAAGGGCAGGTGGGTaGGCTCCTCCTCCATGCCGC +
Preference number: 4 (lower is better)
Translates to: PKALRQSRVRVCAAQGQAPRAGG*APPPCR
Trigger: GCGGCATGGAGGAGGAGCCCACCCACCTGCCCTTGG...GGCCTGGCCCTGGGCTGCACATACCCTCACCCTGCTTTGCCTTAAAGCCTTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR CCA 90 bp GCCCAGGGCCAGGCCAGCCTTTGGCACAATTCGGGGAGGATGGTAGTTGGGAGGGCTGGAAGCCAGCCCTaGCTCTTGGGAGGTGCCAGG +
Preference number: 4 (lower is better)
Translates to: AQGQASLWHNSGRMVVGRAGSQP*LLGGAR
Trigger: CCTGGCACCTCCCAAGAGCCAGGGCTGGCTTCCAGC...CCTCCCAACTACCATCCTCCCCGAATTGTGCCAAAGGCTGGCCTGGCCCTGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR TCA 90 bp GCCAGCAAGCCCAGCTTCTCCGTTCCTGTCATTCCACCAGGGCTGAGGCAGCCACACACTGCTGGGGCATaGGAACCCCGTGCCCTGTGC +
Preference number: 4 (lower is better)
Translates to: ASKPSFSVPVIPPGLRQPHTAGA*EPRALC
Trigger: GCACAGGGCACGGGGTTCTCATGCCCCAGCAGTGTG...TGGCTGCCTCAGCCCTGGTGGAATGACAGGAACGGAGAAGCTGGGCTTGCTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR TCA 90 bp GCCCAGGGCCAGGCCAGCCTTTGGCACAATTCGGGGAGGATGGTAGTTGGGAGGGCCGCCCGTTCACCATaGTGGCCAAGCGTGTGCACA +
Preference number: 4 (lower is better)
Translates to: AQGQASLWHNSGRMVVGRAARSP*WPSVCT
Trigger: TGTGCACACGCTTGGCCATCATGGTGAACGGGCGGC...CCTCCCAACTACCATCCTCCCCGAATTGTGCCAAAGGCTGGCCTGGCCCTGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR GCA 90 bp GCCCAGGGCCAGGCCAGCCTTTGGCACAATTCGGGGAGGATGGTAGTTGGGAGGAACCAGGCCACCCAGTaGACGGCGTTGTTCAGGCCC +
Preference number: 4 (lower is better)
Translates to: AQGQASLWHNSGRMVVGRNQATQ*TALFRP
Trigger: GGGCCTGAACAACGCCGTGCACTGGGTGGCCTGGTT...CCTCCCAACTACCATCCTCCCCGAATTGTGCCAAAGGCTGGCCTGGCCCTGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR CCA 90 bp TGTGTGACTAGGGGCCACGGCCACCGCCTGACATCTGCCCCACACAGCTGCATCAGGGCCTCCAGACGTTaGCGCAGAGCCTCGAGCTCT +
Preference number: 4 (lower is better)
Translates to: CVTRGHGHRLTSAPHSCIRASRR*RRASSS
Trigger: AGAGCTCGAGGCTCTGCGCCAACGTCTGGAGGCCCT...GATGCAGCTGTGTGGGGCAGATGTCAGGCGGTGGCCGTGGCCCCTAGTCACACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR CCA 90 bp TGTGTGACTAGGGGCCACGGCCACCGCCTGACATCTGCCCCACACAGCTGCATCGTCCACCCACACTGCTaGGGCATGAGAACCCCGTGC +
Preference number: 4 (lower is better)
Translates to: CVTRGHGHRLTSAPHSCIVHPHC*GMRTPC
Trigger: GCACGGGGTTCTCATGCCCCAGCAGTGTGGGTGGAC...GATGCAGCTGTGTGGGGCAGATGTCAGGCGGTGGCCGTGGCCCCTAGTCACACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR TCA 90 bp CCAGGACCCAAGGCTTTAAGGCAAAGCAGGGTGAGGGTATGTGCAGCCCAGGGCGGCAAAGCGACTGCATaGCGGGCAGGATGCCGGCTG +
Preference number: 4 (lower is better)
Translates to: PGPKALRQSRVRVCAAQGGKATA*RAGCRL
Trigger: CAGCCGGCATCCTGCCCGTCATGCAGTCGCTTTGCC...GCCCTGGGCTGCACATACCCTCACCCTGCTTTGCCTTAAAGCCTTGGGTCCTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR TCA 90 bp GCCAGCAAGCCCAGCTTCTCCGTTCCTGTCATTCCACCAGGGCTGAGGCAGCCAGCACCTGGCCGTACTTaGGGATGGCGGTCAGAGCTG +
Preference number: 4 (lower is better)
Translates to: ASKPSFSVPVIPPGLRQPAPGRT*GWRSEL
Trigger: CAGCTCTGACCGCCATCCTCAAGTACGGCCAGGTGC...TGGCTGCCTCAGCCCTGGTGGAATGACAGGAACGGAGAAGCTGGGCTTGCTGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR TCA 90 bp TGTGTGACTAGGGGCCACGGCCACCGCCTGACATCTGCCCCACACAGCTGCATCCAGGGTTGCACCCGCTaGCGAACTGCAGGTGTTTGG +
Preference number: 4 (lower is better)
Translates to: CVTRGHGHRLTSAPHSCIQGCTR*RTAGVW
Trigger: CCAAACACCTGCAGTTCGTCAGCGGGTGCAACCCTG...GATGCAGCTGTGTGGGGCAGATGTCAGGCGGTGGCCGTGGCCCCTAGTCACACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR TCA 90 bp ACTAGGGGCCACGGCCACCGCCTGACATCTGCCCCACACAGCTGCATCCCTGATCTCCTCCATGCTGTGTaGCGTCAGCACCACCGAACG +
Preference number: 4 (lower is better)
Translates to: TRGHGHRLTSAPHSCIPDLLHAV*RQHHRT
Trigger: CGTTCGGTGGTGCTGACGTCACACAGCATGGAGGAG...ATCAGGGATGCAGCTGTGTGGGGCAGATGTCAGGCGGTGGCCGTGGCCCCTAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR GCA 90 bp ACTAGGGGCCACGGCCACCGCCTGACATCTGCCCCACACAGCTGCATCCCTGATGCACGAGCTGTAGCCTaGCCACTGCACACAGCATCC +
Preference number: 4 (lower is better)
Translates to: TRGHGHRLTSAPHSCIPDARAVA*PLHTAS
Trigger: GGATGCTGTGTGCAGTGGGCAGGCTACAGCTCGTGC...ATCAGGGATGCAGCTGTGTGGGGCAGATGTCAGGCGGTGGCCGTGGCCCCTAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR GCA 90 bp GCCCAGCTTCTCCGTTCCTGTCATTCCACCAGGGCTGAGGCAGCCACATTCACGGAGGCGCGGTGTGTGTaGCCATGGCCAGCTCCACTC +
Preference number: 4 (lower is better)
Translates to: AQLLRSCHSTRAEAATFTEARCV*PWPAPL
Trigger: GAGTGGAGCTGGCCATGGGCACACACACCGCGCCTC...CGTGAATGTGGCTGCCTCAGCCCTGGTGGAATGACAGGAACGGAGAAGCTGGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR GCA 90 bp ACCCAAGGCTTTAAGGCAAAGCAGGGTGAGGGTATGTGCAGCCCAGGGCCAGGCACCAGCCCTCGAGTTTaGGGCTGCCCTGGCCCACCT +
Preference number: 4 (lower is better)
Translates to: TQGFKAKQGEGMCSPGPGTSPRV*GCPGPP
Trigger: AGGTGGGCCAGGGCAGCCGCAAACTCGAGGGCTGGT...GCCTGGCCCTGGGCTGCACATACCCTCACCCTGCTTTGCCTTAAAGCCTTGGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR GCA 90 bp ACCCAAGGCTTTAAGGCAAAGCAGGGTGAGGGTATGTGCAGCCCAGGGCCAGGCAGGGCAGCCGGAATGTaGTCACCAGCTGCTGGGGGC +
Preference number: 4 (lower is better)
Translates to: TQGFKAKQGEGMCSPGPGRAAGM*SPAAGG
Trigger: GCCCCCAGCAGCTGGTGAGCACATTCCGGCTGCCCT...GCCTGGCCCTGGGCTGCACATACCCTCACCCTGCTTTGCCTTAAAGCCTTGGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR GCA 90 bp GCCCAGGGCCAGGCCAGCCTTTGGCACAATTCGGGGAGGATGGTAGTTGGGAGGCATCCTTCCAGGGGATaGCACGCAGCCGCGTGTACA +
Preference number: 4 (lower is better)
Translates to: AQGQASLWHNSGRMVVGRHPSRG*HAAACT
Trigger: TGTACACGCGGCTGCGTGGCATCCCCTGGAAGGATG...CCTCCCAACTACCATCCTCCCCGAATTGTGCCAAAGGCTGGCCTGGCCCTGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR CCA 90 bp ACTAGGGGCCACGGCCACCGCCTGACATCTGCCCCACACAGCTGCATCCCTGATTTGGCTGTGTCCAGCTaGTTCCTGAGCTCAGCGGCC +
Preference number: 4 (lower is better)
Translates to: TRGHGHRLTSAPHSCIPDLAVSS*FLSSAA
Trigger: GGCCGCTGAGCTCAGGAACCAGCTGGACACAGCCAA...ATCAGGGATGCAGCTGTGTGGGGCAGATGTCAGGCGGTGGCCGTGGCCCCTAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR CCA 90 bp GCCCAGGGCCAGGCCAGCCTTTGGCACAATTCGGGGAGGATGGTAGTTGGGAGGGGGGATCTGAGCCGTTaGGGACATCGAAGCCCAGCT +
Preference number: 4 (lower is better)
Translates to: AQGQASLWHNSGRMVVGRGDLSR*GHRSPA
Trigger: AGCTGGGCTTCGATGTCCCCAACGGCTCAGATCCCC...CCTCCCAACTACCATCCTCCCCGAATTGTGCCAAAGGCTGGCCTGGCCCTGGGC
63% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR CCA 90 bp ACTAGGGGCCACGGCCACCGCCTGACATCTGCCCCACACAGCTGCATCCCTGATGGCCATTCAGGCTGCTaGCTTGAGGTGCAGAGGCCT +
Preference number: 4 (lower is better)
Translates to: TRGHGHRLTSAPHSCIPDGHSGC*LEVQRP
Trigger: AGGCCTCTGCACCTCAAGCCAGCAGCCTGAATGGCC...ATCAGGGATGCAGCTGTGTGGGGCAGATGTCAGGCGGTGGCCGTGGCCCCTAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR CCA 90 bp GGTAGTTGGGAGGAGGGCAGGAGCCCTTTGGTCCTGAACCTGCCTTTCCAGGGCACGACCAAGGGCAGGTaGGTGGGCTCCTCCTCCATG +
Preference number: 4 (lower is better)
Translates to: GSWEEGRSPLVLNLPFQGTTKGR*VGSSSM
Trigger: CATGGAGGAGGAGCCCACCCACCTGCCCTTGGTCGT...GCCCTGGAAAGGCAGGTTCAGGACCAAAGGGCTCCTGCCCTCCTCCCAACTACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR CCA 90 bp ACTAGGGGCCACGGCCACCGCCTGACATCTGCCCCACACAGCTGCATCCCTGATTTGCCGGCCCCGTTGTaGCCTAGGAAAGAGACCACC +
Preference number: 4 (lower is better)
Translates to: TRGHGHRLTSAPHSCIPDLPAPL*PRKETT
Trigger: GGTGGTCTCTTTCCTAGGCCACAACGGGGCCGGCAA...ATCAGGGATGCAGCTGTGTGGGGCAGATGTCAGGCGGTGGCCGTGGCCCCTAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR CCA 90 bp ACTAGGGGCCACGGCCACCGCCTGACATCTGCCCCACACAGCTGCATCCCTGATGGATCGACATGGTCGTaGTCTTGCCGGCCCCGTTGT +
Preference number: 4 (lower is better)
Translates to: TRGHGHRLTSAPHSCIPDGSTWS*SCRPRC
Trigger: ACAACGGGGCCGGCAAGACCACGACCATGTCGATCC...ATCAGGGATGCAGCTGTGTGGGGCAGATGTCAGGCGGTGGCCGTGGCCCCTAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR CCA 90 bp GCCAGCAAGCCCAGCTTCTCCGTTCCTGTCATTCCACCAGGGCTGAGGCAGCCAGTGCTCACCAGCTGCTaGGGGCTGGCATCAGGTGAC +
Preference number: 4 (lower is better)
Translates to: ASKPSFSVPVIPPGLRQPVLTSC*GLASGD
Trigger: GTCACCTGATGCCAGCCCCCAGCAGCTGGTGAGCAC...TGGCTGCCTCAGCCCTGGTGGAATGACAGGAACGGAGAAGCTGGGCTTGCTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR CCA 90 bp ACTAGGGGCCACGGCCACCGCCTGACATCTGCCCCACACAGCTGCATCCCTGATGCACCGCGGGGAAGTTaGTGGGTGATGTGTAGGCAG +
Preference number: 4 (lower is better)
Translates to: TRGHGHRLTSAPHSCIPDAPRGS*WVMCRQ
Trigger: CTGCCTACACATCACCCACCAACTTCCCCGCGGTGC...ATCAGGGATGCAGCTGTGTGGGGCAGATGTCAGGCGGTGGCCGTGGCCCCTAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR TCA 90 bp GCCCAGCTTCTCCGTTCCTGTCATTCCACCAGGGCTGAGGCAGCCACATTCACGTTCAGGCTGCTGGCTTaGGGTGCAGAGGCCTGGCCA +
Preference number: 4 (lower is better)
Translates to: AQLLRSCHSTRAEAATFTFRLLA*GAEAWP
Trigger: TGGCCAGGCCTCTGCACCTCAAGCCAGCAGCCTGAA...CGTGAATGTGGCTGCCTCAGCCCTGGTGGAATGACAGGAACGGAGAAGCTGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR TCA 90 bp CAAGCCCAGCTTCTCCGTTCCTGTCATTCCACCAGGGCTGAGGCAGCCACATTCCAGGAGAGGCTGGGCTaGCAGGTGACTGGGTGCCCT +
Preference number: 4 (lower is better)
Translates to: QAQLLRSCHSTRAEAATFQERLG*QVTGCP
Trigger: AGGGCACCCAGTCACCTGTCAGCCCAGCCTCTCCTG...GAATGTGGCTGCCTCAGCCCTGGTGGAATGACAGGAACGGAGAAGCTGGGCTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR TCA 90 bp CCAGGACCCAAGGCTTTAAGGCAAAGCAGGGTGAGGGTATGTGCAGCCCAGGGCCCACTGGGGACTGGCTaGACGTGTGCCACTGGATGC +
Preference number: 4 (lower is better)
Translates to: PGPKALRQSRVRVCAAQGPLGTG*TCATGC
Trigger: GCATCCAGTGGCACACGTTCAGCCAGTCCCCAGTGG...GCCCTGGGCTGCACATACCCTCACCCTGCTTTGCCTTAAAGCCTTGGGTCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR TCA 90 bp GCCCAGGGCCAGGCCAGCCTTTGGCACAATTCGGGGAGGATGGTAGTTGGGAGGCCACATGCTTGCGGATaGACTGGGACACTTGCGGCT +
Preference number: 4 (lower is better)
Translates to: AQGQASLWHNSGRMVVGRPHACG*TGTLAA
Trigger: AGCCGCAAGTGTCCCAGTTCATCCGCAAGCATGTGG...CCTCCCAACTACCATCCTCCCCGAATTGTGCCAAAGGCTGGCCTGGCCCTGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR GCA 90 bp CCCAAGGCTTTAAGGCAAAGCAGGGTGAGGGTATGTGCAGCCCAGGGCCAGGCCTCAGGGCAAAGCGACTaGATGACGGGCAGGATGCCG +
Preference number: 4 (lower is better)
Translates to: PKALRQSRVRVCAAQGQASGQSD*MTGRMP
Trigger: CGGCATCCTGCCCGTCATGCAGTCGCTTTGCCCTGA...GGCCTGGCCCTGGGCTGCACATACCCTCACCCTGCTTTGCCTTAAAGCCTTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR GCA 90 bp GCCCAGGGCCAGGCCAGCCTTTGGCACAATTCGGGGAGGATGGTAGTTGGGAGGCCAGGGAGCTCATGTTaGCTCTCCGAAGCGCTTCAG +
Preference number: 4 (lower is better)
Translates to: AQGQASLWHNSGRMVVGRPGSSC*LSEALQ
Trigger: CTGAAGCGCTTCGGAGAGGCAACATGAGCTCCCTGG...CCTCCCAACTACCATCCTCCCCGAATTGTGCCAAAGGCTGGCCTGGCCCTGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR GCA 90 bp GCCCAGGGCCAGGCCAGCCTTTGGCACAATTCGGGGAGGATGGTAGTTGGGAGGGACTGGCTGAACGTGTaGCACTGGATGCCCACTCCT +
Preference number: 4 (lower is better)
Translates to: AQGQASLWHNSGRMVVGRDWLNV*HWMPTP
Trigger: AGGAGTGGGCATCCAGTGGCACACGTTCAGCCAGTC...CCTCCCAACTACCATCCTCCCCGAATTGTGCCAAAGGCTGGCCTGGCCCTGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR GCA 90 bp ACTAGGGGCCACGGCCACCGCCTGACATCTGCCCCACACAGCTGCATCCCTGATAGGAGCCCATGGAACTaGCGCATCTTCAGCCACCAG +
Preference number: 4 (lower is better)
Translates to: TRGHGHRLTSAPHSCIPDRSPWN*RIFSHQ
Trigger: CTGGTGGCTGAAGATGCGGCAGTTCCATGGGCTCCT...ATCAGGGATGCAGCTGTGTGGGGCAGATGTCAGGCGGTGGCCGTGGCCCCTAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR GCA 90 bp GCCCAGCTTCTCCGTTCCTGTCATTCCACCAGGGCTGAGGCAGCCACATTCACGACTGTCGAAGAACCGTaGCGCCAGCAGGCGGGACTC +
Preference number: 4 (lower is better)
Translates to: AQLLRSCHSTRAEAATFTTVEEP*RQQAGL
Trigger: GAGTCCCGCCTGCTGGCGGCACGGTTCTTCGACAGT...CGTGAATGTGGCTGCCTCAGCCCTGGTGGAATGACAGGAACGGAGAAGCTGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR GCA 90 bp GCCCAGGGCCAGGCCAGCCTTTGGCACAATTCGGGGAGGATGGTAGTTGGGAGGCACCCGCTGACGAACTaGAGGTGTTTGGCCTTGGTG +
Preference number: 4 (lower is better)
Translates to: AQGQASLWHNSGRMVVGRHPLTN*RCLALV
Trigger: CACCAAGGCCAAACACCTGCAGTTCGTCAGCGGGTG...CCTCCCAACTACCATCCTCCCCGAATTGTGCCAAAGGCTGGCCTGGCCCTGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
3UTR CAA 72 bp GGTGAGGGTATGTGCAGCCCAGGGCCAGGCCAGCCTTaGGCACAATTCGGGGAGGATGGTAGTTGGGAGGAG +
Preference number: 4 (lower is better)
Translates to: GEGMCSPGPGQP*AQFGEDGSWEE
Trigger: CTCCTCCCAACTACCATCCTCCCCGAATTGTGCCAAAGGCTGGCCTGGCCCTGGGCTGCACATACCCTCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR TCA 90 bp CCCAAGGCTTTAAGGCAAAGCAGGGTGAGGGTATGTGCAGCCCAGGGCCAGGCCTGGGGTTGCTGGTCATaGGGTGCACTAGAAGGCCCA +
Preference number: 4 (lower is better)
Translates to: PKALRQSRVRVCAAQGQAWGCWS*GALEGP
Trigger: TGGGCCTTCTAGTGCACCTCATGACCAGCAACCCCA...GGCCTGGCCCTGGGCTGCACATACCCTCACCCTGCTTTGCCTTAAAGCCTTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR TCA 90 bp GGTAGTTGGGAGGAGGGCAGGAGCCCTTTGGTCCTGAACCTGCCTTTCCAGGGCTGTGCCATTAGGCAGTaGGAAGTCCTGGCGCAGAGC +
Preference number: 4 (lower is better)
Translates to: GSWEEGRSPLVLNLPFQGCAIRQ*EVLAQS
Trigger: GCTCTGCGCCAGGACTTCTCACTGCCTAATGGCACA...GCCCTGGAAAGGCAGGTTCAGGACCAAAGGGCTCCTGCCCTCCTCCCAACTACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR TCA 90 bp ACTAGGGGCCACGGCCACCGCCTGACATCTGCCCCACACAGCTGCATCCCTGATCACTCACCTTGGACATaGACTGGATCCAGCCACAGG +
Preference number: 4 (lower is better)
Translates to: TRGHGHRLTSAPHSCIPDHSPWT*TGSSHR
Trigger: CCTGTGGCTGGATCCAGTTCATGTCCAAGGTGAGTG...ATCAGGGATGCAGCTGTGTGGGGCAGATGTCAGGCGGTGGCCGTGGCCCCTAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR TCA 90 bp CCCAAGGCTTTAAGGCAAAGCAGGGTGAGGGTATGTGCAGCCCAGGGCCAGGCCCGTTGGCAGGAGACTTaGGCACACAAGTGGCACCCA +
Preference number: 4 (lower is better)
Translates to: PKALRQSRVRVCAAQGQARWQET*AHKWHP
Trigger: TGGGTGCCACTTGTGTGCTCAAGTCTCCTGCCAACG...GGCCTGGCCCTGGGCTGCACATACCCTCACCCTGCTTTGCCTTAAAGCCTTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR TCA 90 bp GCCCAGGGCCAGGCCAGCCTTTGGCACAATTCGGGGAGGATGGTAGTTGGGAGGCTCCAGTCAGCATCTTaGAGGTGCTGGTCTTCCCTG +
Preference number: 4 (lower is better)
Translates to: AQGQASLWHNSGRMVVGRLQSAS*RCWSSL
Trigger: CAGGGAAGACCAGCACCTTCAAGATGCTGACTGGAG...CCTCCCAACTACCATCCTCCCCGAATTGTGCCAAAGGCTGGCCTGGCCCTGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR TCA 90 bp CCCAAGGCTTTAAGGCAAAGCAGGGTGAGGGTATGTGCAGCCCAGGGCCAGGCCCCAGGGTGGTCTGGCTaGCTGAGTAATCCTCGATGC +
Preference number: 4 (lower is better)
Translates to: PKALRQSRVRVCAAQGQAPGWSG*LSNPRC
Trigger: GCATCGAGGATTACTCAGTCAGCCAGACCACCCTGG...GGCCTGGCCCTGGGCTGCACATACCCTCACCCTGCTTTGCCTTAAAGCCTTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR TCA 90 bp GGTAGTTGGGAGGAGGGCAGGAGCCCTTTGGTCCTGAACCTGCCTTTCCAGGGCAGAGCGTATCAGTGTTaGAGGAGAGCTGGGCCCGCT +
Preference number: 4 (lower is better)
Translates to: GSWEEGRSPLVLNLPFQGRAYQC*RRAGPA
Trigger: AGCGGGCCCAGCTCTCCTTCAACACTGATACGCTCT...GCCCTGGAAAGGCAGGTTCAGGACCAAAGGGCTCCTGCCCTCCTCCCAACTACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR GCA 90 bp ACTAGGGGCCACGGCCACCGCCTGACATCTGCCCCACACAGCTGCATCCCTGATATGGTGGGCTTCTTCTaGCGCAGTCCCAACAGGATG +
Preference number: 4 (lower is better)
Translates to: TRGHGHRLTSAPHSCIPDMVGFF*RSPNRM
Trigger: CATCCTGTTGGGACTGCGGCAGAAGAAGCCCACCAT...ATCAGGGATGCAGCTGTGTGGGGCAGATGTCAGGCGGTGGCCGTGGCCCCTAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR GCA 90 bp AGCCTTTGGCACAATTCGGGGAGGATGGTAGTTGGGAGGAGGGCAGGAGCCCTTGCTGCTGGCTTGAGGTaGAGAGGCCTGGCCAGCACA +
Preference number: 4 (lower is better)
Translates to: SLWHNSGRMVVGRRAGALAAGLR*RGLAST
Trigger: TGTGCTGGCCAGGCCTCTGCACCTCAAGCCAGCAGC...AAGGGCTCCTGCCCTCCTCCCAACTACCATCCTCCCCGAATTGTGCCAAAGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR GCA 90 bp CCCAAGGCTTTAAGGCAAAGCAGGGTGAGGGTATGTGCAGCCCAGGGCCAGGCCCCACACAAGATGGGTTaGAAGCCAGCCCAGAGCTGC +
Preference number: 4 (lower is better)
Translates to: PKALRQSRVRVCAAQGQAPHKMG*KPAQSC
Trigger: GCAGCTCTGGGCTGGCTTGCAACCCATCTTGTGTGG...GGCCTGGCCCTGGGCTGCACATACCCTCACCCTGCTTTGCCTTAAAGCCTTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR GCA 90 bp GCCCAGGGCCAGGCCAGCCTTTGGCACAATTCGGGGAGGATGGTAGTTGGGAGGCTTCTGTCCGCCCACTaGCCAGCCAATAGGACTTCT +
Preference number: 4 (lower is better)
Translates to: AQGQASLWHNSGRMVVGRLLSAH*PANRTS
Trigger: AGAAGTCCTATTGGCTGGGCAGTGGGCGGACAGAAG...CCTCCCAACTACCATCCTCCCCGAATTGTGCCAAAGGCTGGCCTGGCCCTGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR GCA 90 bp CCCAAGGCTTTAAGGCAAAGCAGGGTGAGGGTATGTGCAGCCCAGGGCCAGGCCATGAACTGGGACACTTaGGGCTCCGAGCAGCTGCTC +
Preference number: 4 (lower is better)
Translates to: PKALRQSRVRVCAAQGQAMNWDT*GSEQLL
Trigger: GAGCAGCTGCTCGGAGCCGCAAGTGTCCCAGTTCAT...GGCCTGGCCCTGGGCTGCACATACCCTCACCCTGCTTTGCCTTAAAGCCTTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR GCA 90 bp CCAGGACCCAAGGCTTTAAGGCAAAGCAGGGTGAGGGTATGTGCAGCCCAGGGCAGCTGTCAGGCCCTCTaGCCCAGGCAGCACATCCTT +
Preference number: 4 (lower is better)
Translates to: PGPKALRQSRVRVCAAQGSCQAL*PRQHIL
Trigger: AAGGATGTGCTGCCTGGGGCAGAGGGCCTGACAGCT...GCCCTGGGCTGCACATACCCTCACCCTGCTTTGCCTTAAAGCCTTGGGTCCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR GCA 90 bp CCCAAGGCTTTAAGGCAAAGCAGGGTGAGGGTATGTGCAGCCCAGGGCCAGGCCAGAGCCCACAGAGGATaGAGACTGCAGCGATGCCTG +
Preference number: 4 (lower is better)
Translates to: PKALRQSRVRVCAAQGQARAHRG*RLQRCL
Trigger: CAGGCATCGCTGCAGTCTGCATCCTCTGTGGGCTCT...GGCCTGGCCCTGGGCTGCACATACCCTCACCCTGCTTTGCCTTAAAGCCTTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR CCA 90 bp GCCCAGGGCCAGGCCAGCCTTTGGCACAATTCGGGGAGGATGGTAGTTGGGAGGCGCTTCAGAGCCCACTaGTGCGTACAGGATTTTGGG +
Preference number: 4 (lower is better)
Translates to: AQGQASLWHNSGRMVVGRRFRAH*CVQDFG
Trigger: CCCAAAATCCTGTACGCACCAGTGGGCTCTGAAGCG...CCTCCCAACTACCATCCTCCCCGAATTGTGCCAAAGGCTGGCCTGGCCCTGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR CCA 90 bp ACTAGGGGCCACGGCCACCGCCTGACATCTGCCCCACACAGCTGCATCCCTGATACCTTGGACATGAACTaGATCCAGCCACAGGCTGCG +
Preference number: 4 (lower is better)
Translates to: TRGHGHRLTSAPHSCIPDTLDMN*IQPQAA
Trigger: CGCAGCCTGTGGCTGGATCCAGTTCATGTCCAAGGT...ATCAGGGATGCAGCTGTGTGGGGCAGATGTCAGGCGGTGGCCGTGGCCCCTAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR CCA 90 bp GCCAGCAAGCCCAGCTTCTCCGTTCCTGTCATTCCACCAGGGCTGAGGCAGCCATGCTTGCGGATGAACTaGGACACTTGCGGCTCCGAG +
Preference number: 4 (lower is better)
Translates to: ASKPSFSVPVIPPGLRQPCLRMN*DTCGSE
Trigger: CTCGGAGCCGCAAGTGTCCCAGTTCATCCGCAAGCA...TGGCTGCCTCAGCCCTGGTGGAATGACAGGAACGGAGAAGCTGGGCTTGCTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR CCA 90 bp CCCAAGGCTTTAAGGCAAAGCAGGGTGAGGGTATGTGCAGCCCAGGGCCAGGCCCACTCTCATCTGGGGTaGGTGTCCACCCACACTGCT +
Preference number: 4 (lower is better)
Translates to: PKALRQSRVRVCAAQGQAHSHLG*VSTHTA
Trigger: AGCAGTGTGGGTGGACACCCACCCCAGATGAGAGTG...GGCCTGGCCCTGGGCTGCACATACCCTCACCCTGCTTTGCCTTAAAGCCTTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR TCA 90 bp GGTAGTTGGGAGGAGGGCAGGAGCCCTTTGGTCCTGAACCTGCCTTTCCAGGGCGCAGTCCCAACAGGATaGAGAAGAGGACAAGCGGGA +
Preference number: 4 (lower is better)
Translates to: GSWEEGRSPLVLNLPFQGAVPTG*RRGQAG
Trigger: TCCCGCTTGTCCTCTTCTTCATCCTGTTGGGACTGC...GCCCTGGAAAGGCAGGTTCAGGACCAAAGGGCTCCTGCCCTCCTCCCAACTACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR TCA 90 bp ACCCAAGGCTTTAAGGCAAAGCAGGGTGAGGGTATGTGCAGCCCAGGGCCAGGCCCTCAATGTACCAAGTaGGCACGCCGTAGACCACCG +
Preference number: 4 (lower is better)
Translates to: TQGFKAKQGEGMCSPGPGPQCTK*ARRRPP
Trigger: CGGTGGTCTACGGCGTGCTCACTTGGTACATTGAGG...GCCTGGCCCTGGGCTGCACATACCCTCACCCTGCTTTGCCTTAAAGCCTTGGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR TCA 90 bp ACTAGGGGCCACGGCCACCGCCTGACATCTGCCCCACACAGCTGCATCCCTGATCTGCCTCTTGTAAGCTaGCATTGTCTGGGTCCTGCA +
Preference number: 4 (lower is better)
Translates to: TRGHGHRLTSAPHSCIPDLPLVS*HCLGPA
Trigger: TGCAGGACCCAGACAATGTCAGCTTACAAGAGGCAG...ATCAGGGATGCAGCTGTGTGGGGCAGATGTCAGGCGGTGGCCGTGGCCCCTAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR TCA 90 bp GCCAGCAAGCCCAGCTTCTCCGTTCCTGTCATTCCACCAGGGCTGAGGCAGCCATCAGGATGTCACCTGTaGCCACTCTCATCTGGGGTG +
Preference number: 4 (lower is better)
Translates to: ASKPSFSVPVIPPGLRQPSGCHL*PLSSGV
Trigger: CACCCCAGATGAGAGTGGTCACAGGTGACATCCTGA...TGGCTGCCTCAGCCCTGGTGGAATGACAGGAACGGAGAAGCTGGGCTTGCTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR TCA 90 bp AGCCTTTGGCACAATTCGGGGAGGATGGTAGTTGGGAGGAGGGCAGGAGCCCTTTGTAGGCCATCTCCATaGGCCCGTGGCCCAGGTTGT +
Preference number: 4 (lower is better)
Translates to: SLWHNSGRMVVGRRAGALCRPSP*ARGPGC
Trigger: ACAACCTGGGCCACGGGCTCATGGAGATGGCCTACA...AAGGGCTCCTGCCCTCCTCCCAACTACCATCCTCCCCGAATTGTGCCAAAGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR TCA 90 bp GCCAGCAAGCCCAGCTTCTCCGTTCCTGTCATTCCACCAGGGCTGAGGCAGCCATCTTCCCTGCACCATTaGCACCAAGGAGCCCAAAGC +
Preference number: 4 (lower is better)
Translates to: ASKPSFSVPVIPPGLRQPSSLHH*HQGAQS
Trigger: GCTTTGGGCTCCTTGGTGTCAATGGTGCAGGGAAGA...TGGCTGCCTCAGCCCTGGTGGAATGACAGGAACGGAGAAGCTGGGCTTGCTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR TCA 90 bp AGCCTTTGGCACAATTCGGGGAGGATGGTAGTTGGGAGGAGGGCAGGAGCCCTTGCACGCTGTGTCCATTaGCAAAGGCCTCTCCCCCAG +
Preference number: 4 (lower is better)
Translates to: SLWHNSGRMVVGRRAGALARCVH*QRPLPQ
Trigger: CTGGGGGAGAGGCCTTTGTCAATGGACACAGCGTGC...AAGGGCTCCTGCCCTCCTCCCAACTACCATCCTCCCCGAATTGTGCCAAAGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR TCA 90 bp GCCAGCAAGCCCAGCTTCTCCGTTCCTGTCATTCCACCAGGGCTGAGGCAGCCAAGGCAGGGTACCCAATaGGGGCAATGGCTGTGGAAA +
Preference number: 4 (lower is better)
Translates to: ASKPSFSVPVIPPGLRQPRQGTQ*GQWLWK
Trigger: TTTCCACAGCCATTGCCCTCATTGGGTACCCTGCCT...TGGCTGCCTCAGCCCTGGTGGAATGACAGGAACGGAGAAGCTGGGCTTGCTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR GCA 90 bp ACTAGGGGCCACGGCCACCGCCTGACATCTGCCCCACACAGCTGCATCCCTGATCGATGGTGCGGTTGTTaGCACACAAGATGGGTTGCA +
Preference number: 4 (lower is better)
Translates to: TRGHGHRLTSAPHSCIPDRWCGC*HTRWVA
Trigger: TGCAACCCATCTTGTGTGGCAACAACCGCACCATCG...ATCAGGGATGCAGCTGTGTGGGGCAGATGTCAGGCGGTGGCCGTGGCCCCTAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR GCA 90 bp GCCCAGGGCCAGGCCAGCCTTTGGCACAATTCGGGGAGGATGGTAGTTGGGAGGTACTGCTGTAACCACTaGAGATGCTGCTGCAGCCTG +
Preference number: 4 (lower is better)
Translates to: AQGQASLWHNSGRMVVGRYCCNH*RCCCSL
Trigger: CAGGCTGCAGCAGCATCTGCAGTGGTTACAGCAGTA...CCTCCCAACTACCATCCTCCCCGAATTGTGCCAAAGGCTGGCCTGGCCCTGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR GCA 90 bp GCCCAGGGCCAGGCCAGCCTTTGGCACAATTCGGGGAGGATGGTAGTTGGGAGGTCTCATCCATCTCGGTaGGGATGTCGTGCCCATAGA +
Preference number: 4 (lower is better)
Translates to: AQGQASLWHNSGRMVVGRSHPSR*GCRAHR
Trigger: TCTATGGGCACGACATCCGCACCGAGATGGATGAGA...CCTCCCAACTACCATCCTCCCCGAATTGTGCCAAAGGCTGGCCTGGCCCTGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR GCA 90 bp CCCAAGGCTTTAAGGCAAAGCAGGGTGAGGGTATGTGCAGCCCAGGGCCAGGCCAGGGAGGAAGCCACATaGTTGCGGATGAACTGGGAC +
Preference number: 4 (lower is better)
Translates to: PKALRQSRVRVCAAQGQAREEAT*LRMNWD
Trigger: GTCCCAGTTCATCCGCAAGCATGTGGCTTCCTCCCT...GGCCTGGCCCTGGGCTGCACATACCCTCACCCTGCTTTGCCTTAAAGCCTTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR GCA 90 bp AGCCTTTGGCACAATTCGGGGAGGATGGTAGTTGGGAGGAGGGCAGGAGCCCTTGGCATGAGAACCCCGTaGCCTGTGCAGAGCAGGTAC +
Preference number: 4 (lower is better)
Translates to: SLWHNSGRMVVGRRAGALGMRTP*PVQSRY
Trigger: GTACCTGCTCTGCACAGGGCACGGGGTTCTCATGCC...AAGGGCTCCTGCCCTCCTCCCAACTACCATCCTCCCCGAATTGTGCCAAAGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR GCA 90 bp CCCAAGGCTTTAAGGCAAAGCAGGGTGAGGGTATGTGCAGCCCAGGGCCAGGCCCCTCTCCCCCAGTTGTaGTCTCATCTCCAGTCAGCA +
Preference number: 4 (lower is better)
Translates to: PKALRQSRVRVCAAQGQAPLPQL*SHLQSA
Trigger: TGCTGACTGGAGATGAGAGCACAACTGGGGGAGAGG...GGCCTGGCCCTGGGCTGCACATACCCTCACCCTGCTTTGCCTTAAAGCCTTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR GCA 90 bp CAAGCCCAGCTTCTCCGTTCCTGTCATTCCACCAGGGCTGAGGCAGCCACATTCAGCCGCGTGTACAGCTaGAGGTGTTCACGAGCCGTG +
Preference number: 4 (lower is better)
Translates to: QAQLLRSCHSTRAEAATFSRVYS*RCSRAV
Trigger: CACGGCTCGTGAACACCTGCAGCTGTACACGCGGCT...GAATGTGGCTGCCTCAGCCCTGGTGGAATGACAGGAACGGAGAAGCTGGGCTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR CCA 90 bp GCCCAGCTTCTCCGTTCCTGTCATTCCACCAGGGCTGAGGCAGCCACATTCACGCTTGGGCCGTGCTGTTaGGCAGTGACAGGTTCTGCA +
Preference number: 4 (lower is better)
Translates to: AQLLRSCHSTRAEAATFTLGPCC*AVTGSA
Trigger: TGCAGAACCTGTCACTGCCCAACAGCACGGCCCAAG...CGTGAATGTGGCTGCCTCAGCCCTGGTGGAATGACAGGAACGGAGAAGCTGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR CCA 90 bp CCCAAGGCTTTAAGGCAAAGCAGGGTGAGGGTATGTGCAGCCCAGGGCCAGGCCGCTGCTGAGCAATCTTaGCTGTGTCCAGCTGGTTCC +
Preference number: 4 (lower is better)
Translates to: PKALRQSRVRVCAAQGQAAAEQS*LCPAGS
Trigger: GGAACCAGCTGGACACAGCCAAGATTGCTCAGCAGC...GGCCTGGCCCTGGGCTGCACATACCCTCACCCTGCTTTGCCTTAAAGCCTTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR CCA 90 bp GCCAGCAAGCCCAGCTTCTCCGTTCCTGTCATTCCACCAGGGCTGAGGCAGCCAGTCATCTCCTTCCACTaGGGACTGGCTGAACGTGTG +
Preference number: 4 (lower is better)
Translates to: ASKPSFSVPVIPPGLRQPVISFH*GLAERV
Trigger: CACACGTTCAGCCAGTCCCCAGTGGAAGGAGATGAC...TGGCTGCCTCAGCCCTGGTGGAATGACAGGAACGGAGAAGCTGGGCTTGCTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR CCA 90 bp CCAGGACCCAAGGCTTTAAGGCAAAGCAGGGTGAGGGTATGTGCAGCCCAGGGCTCCATGGCACAGGCCTaGTCCTCCTCCATAACGCTG +
Preference number: 4 (lower is better)
Translates to: PGPKALRQSRVRVCAAQGSMAQA*SSSITL
Trigger: CAGCGTTATGGAGGAGGACCAGGCCTGTGCCATGGA...GCCCTGGGCTGCACATACCCTCACCCTGCTTTGCCTTAAAGCCTTGGGTCCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR CCA 90 bp CCCAAGGCTTTAAGGCAAAGCAGGGTGAGGGTATGTGCAGCCCAGGGCCAGGCCGAGCACGTTGTGCTGTaGGCACATGCCCAGGTTCTT +
Preference number: 4 (lower is better)
Translates to: PKALRQSRVRVCAAQGQAEHVVL*AHAQVL
Trigger: AAGAACCTGGGCATGTGCCCACAGCACAACGTGCTC...GGCCTGGCCCTGGGCTGCACATACCCTCACCCTGCTTTGCCTTAAAGCCTTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR CCA 90 bp CCCAAGGCTTTAAGGCAAAGCAGGGTGAGGGTATGTGCAGCCCAGGGCCAGGCCTTCACCAGGAGCCCATaGAACTGCCGCATCTTCAGC +
Preference number: 4 (lower is better)
Translates to: PKALRQSRVRVCAAQGQAFTRSP*NCRIFS
Trigger: GCTGAAGATGCGGCAGTTCCATGGGCTCCTGGTGAA...GGCCTGGCCCTGGGCTGCACATACCCTCACCCTGCTTTGCCTTAAAGCCTTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR CCA 90 bp AGCCTTTGGCACAATTCGGGGAGGATGGTAGTTGGGAGGAGGGCAGGAGCCCTTTGGCCCAGCAGTAGGTaGCAGGGACATGTTCCAGGC +
Preference number: 4 (lower is better)
Translates to: SLWHNSGRMVVGRRAGALWPSSR*QGHVPG
Trigger: GCCTGGAACATGTCCCTGCCACCTACTGCTGGGCCA...AAGGGCTCCTGCCCTCCTCCCAACTACCATCCTCCCCGAATTGTGCCAAAGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR CCA 90 bp CCAGGACCCAAGGCTTTAAGGCAAAGCAGGGTGAGGGTATGTGCAGCCCAGGGCGTGACCACTCTCATCTaGGGTGGGTGTCCACCCACA +
Preference number: 4 (lower is better)
Translates to: PGPKALRQSRVRVCAAQGVTTLI*GGCPPT
Trigger: TGTGGGTGGACACCCACCCCAGATGAGAGTGGTCAC...GCCCTGGGCTGCACATACCCTCACCCTGCTTTGCCTTAAAGCCTTGGGTCCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR CCA 90 bp GCCCAGGGCCAGGCCAGCCTTTGGCACAATTCGGGGAGGATGGTAGTTGGGAGGGTCTTGTTCATGGGGTaGTTGGTGACGGTGATGCCA +
Preference number: 4 (lower is better)
Translates to: AQGQASLWHNSGRMVVGRVLFMG*LVTVMP
Trigger: TGGCATCACCGTCACCAACCACCCCATGAACAAGAC...CCTCCCAACTACCATCCTCCCCGAATTGTGCCAAAGGCTGGCCTGGCCCTGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR TCA 90 bp GGTAGTTGGGAGGAGGGCAGGAGCCCTTTGGTCCTGAACCTGCCTTTCCAGGGCGTTCCAGAAGCTGGGTaGCCGTGGAGTTGGCATATT +
Preference number: 4 (lower is better)
Translates to: GSWEEGRSPLVLNLPFQGVPEAG*PWSWHI
Trigger: AATATGCCAACTCCACGGTCACCCAGCTTCTGGAAC...GCCCTGGAAAGGCAGGTTCAGGACCAAAGGGCTCCTGCCCTCCTCCCAACTACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR TCA 90 bp CAGTCAAGGGTGTCCATGAAAAGACATCTGTGCAAGATGCTGGCCTGGGTAGACTGCCAGGGCCTGAGCTaGGGGCCTCCAGACGTTGGC +
Preference number: 4 (lower is better)
Translates to: QSRVSMKRHLCKMLAWVDCQGLS*GPPDVG
Trigger: GCCAACGTCTGGAGGCCCTCAGCTCAGGCCCTGGCA...GTCTACCCAGGCCAGCATCTTGCACAGATGTCTTTTCATGGACACCCTTGACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR TCA 90 bp ACCCAAGGCTTTAAGGCAAAGCAGGGTGAGGGTATGTGCAGCCCAGGGCCAGGCCGTGCTGTTGGGCAGTaGCAGGTTCTGCATCAGGAA +
Preference number: 4 (lower is better)
Translates to: TQGFKAKQGEGMCSPGPGRAVGQ*QVLHQE
Trigger: TTCCTGATGCAGAACCTGTCACTGCCCAACAGCACG...GCCTGGCCCTGGGCTGCACATACCCTCACCCTGCTTTGCCTTAAAGCCTTGGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR TCA 90 bp GGTAGTTGGGAGGAGGGCAGGAGCCCTTTGGTCCTGAACCTGCCTTTCCAGGGCCATGCTTTTGAGGCGTaGGTAGAACCAGAGGTGCTC +
Preference number: 4 (lower is better)
Translates to: GSWEEGRSPLVLNLPFQGHAFEA*VEPEVL
Trigger: GAGCACCTCTGGTTCTACTCACGCCTCAAAAGCATG...GCCCTGGAAAGGCAGGTTCAGGACCAAAGGGCTCCTGCCCTCCTCCCAACTACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR TCA 90 bp GCCCAGCTTCTCCGTTCCTGTCATTCCACCAGGGCTGAGGCAGCCACATTCACGGCTTGTACTTCAGAATaGGGTCCCAGATGGCACGGC +
Preference number: 4 (lower is better)
Translates to: AQLLRSCHSTRAEAATFTACTSE*GPRWHG
Trigger: GCCGTGCCATCTGGGACCTCATTCTGAAGTACAAGC...CGTGAATGTGGCTGCCTCAGCCCTGGTGGAATGACAGGAACGGAGAAGCTGGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR TCA 90 bp AAGGGTGTCCATGAAAAGACATCTGTGCAAGATGCTGGCCTGGGTAGACTTGCGCAGCCGAGGACAACCTaGGGGGCTGGAAGCCAGCCC +
Preference number: 4 (lower is better)
Translates to: KGVHEKTSVQDAGLGRLAQPRTT*GAGSQP
Trigger: GGGCTGGCTTCCAGCCCCTCAGGTTGTCCTCGGCTG...CGCAAGTCTACCCAGGCCAGCATCTTGCACAGATGTCTTTTCATGGACACCCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR TCA 90 bp ACATTCACGGCTTCCCATGGTAGCCTAACTTCTGTACCACAGCCAAGTGAGGGACGAAGGCCCCCTTCTTaGCGGCCTCGCTGGGCAGGA +
Preference number: 4 (lower is better)
Translates to: TFTASHGSLTSVPQPSEGRRPPS*RPRWAG
Trigger: TCCTGCCCAGCGAGGCCGTCAAGAAGGGGGCCTTCG...TCCCTCACTTGGCTGTGGTACAGAAGTTAGGCTACCATGGGAAGCCGTGAATGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR TCA 90 bp CCAGGACCCAAGGCTTTAAGGCAAAGCAGGGTGAGGGTATGTGCAGCCCAGGGCGCAGGCAGCAGAATCTaGGAGCAGAGAGCTTTGGAG +
Preference number: 4 (lower is better)
Translates to: PGPKALRQSRVRVCAAQGAGSRI*EQRALE
Trigger: CTCCAAAGCTCTCTGCTCTCAGATTCTGCTGCCTGC...GCCCTGGGCTGCACATACCCTCACCCTGCTTTGCCTTAAAGCCTTGGGTCCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR TCA 90 bp ACTAGGGGCCACGGCCACCGCCTGACATCTGCCCCACACAGCTGCATCCCTGATGGAAACGGTCAGAGGTaGAGAGCAGGTACTCAGAAA +
Preference number: 4 (lower is better)
Translates to: TRGHGHRLTSAPHSCIPDGNGQR*RAGTQK
Trigger: TTTCTGAGTACCTGCTCTTCACCTCTGACCGTTTCC...ATCAGGGATGCAGCTGTGTGGGGCAGATGTCAGGCGGTGGCCGTGGCCCCTAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR TCA 90 bp CCAGGACCCAAGGCTTTAAGGCAAAGCAGGGTGAGGGTATGTGCAGCCCAGGGCGAGGAACACGTAGGCTaGGCTAGGGACCTCAAACCA +
Preference number: 4 (lower is better)
Translates to: PGPKALRQSRVRVCAAQGEEHVG*ARDLKP
Trigger: TGGTTTGAGGTCCCTAGCTCAGCCTACGTGTTCCTC...GCCCTGGGCTGCACATACCCTCACCCTGCTTTGCCTTAAAGCCTTGGGTCCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR TCA 90 bp AGCCTTTGGCACAATTCGGGGAGGATGGTAGTTGGGAGGAGGGCAGGAGCCCTTCCTGCTCCATCTTGCTaGACACCTGAGCCAGCGAGA +
Preference number: 4 (lower is better)
Translates to: SLWHNSGRMVVGRRAGALPAPSC*TPEPAR
Trigger: TCTCGCTGGCTCAGGTGTTCAGCAAGATGGAGCAGG...AAGGGCTCCTGCCCTCCTCCCAACTACCATCCTCCCCGAATTGTGCCAAAGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR TCA 90 bp CAAGCCCAGCTTCTCCGTTCCTGTCATTCCACCAGGGCTGAGGCAGCCACATTCGGTGGTCTGGCTGACTaGGTAATCCTCGATGCCCAG +
Preference number: 4 (lower is better)
Translates to: QAQLLRSCHSTRAEAATFGGLAD*VILDAQ
Trigger: CTGGGCATCGAGGATTACTCAGTCAGCCAGACCACC...GAATGTGGCTGCCTCAGCCCTGGTGGAATGACAGGAACGGAGAAGCTGGGCTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR GCA 90 bp CAAGCCCAGCTTCTCCGTTCCTGTCATTCCACCAGGGCTGAGGCAGCCACATTCGCTGAGCACTGCCCTTaGAGAGTGTCAGGAGAGGCT +
Preference number: 4 (lower is better)
Translates to: QAQLLRSCHSTRAEAATFAEHCP*RVSGEA
Trigger: AGCCTCTCCTGACACTCTGCAAGGGCAGTGCTCAGC...GAATGTGGCTGCCTCAGCCCTGGTGGAATGACAGGAACGGAGAAGCTGGGCTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR GCA 90 bp GCCAGCAAGCCCAGCTTCTCCGTTCCTGTCATTCCACCAGGGCTGAGGCAGCCAACAAAGGCTGAGCACTaGCCTTGCAGAGTGTCAGGA +
Preference number: 4 (lower is better)
Translates to: ASKPSFSVPVIPPGLRQPTKAEH*PCRVSG
Trigger: TCCTGACACTCTGCAAGGGCAGTGCTCAGCCTTTGT...TGGCTGCCTCAGCCCTGGTGGAATGACAGGAACGGAGAAGCTGGGCTTGCTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR GCA 90 bp ACTAGGGGCCACGGCCACCGCCTGACATCTGCCCCACACAGCTGCATCCCTGATTTCAGAGCCCACTGGTaGGTACAGGATTTTGGGGTT +
Preference number: 4 (lower is better)
Translates to: TRGHGHRLTSAPHSCIPDFRAHW*VQDFGV
Trigger: AACCCCAAAATCCTGTACGCACCAGTGGGCTCTGAA...ATCAGGGATGCAGCTGTGTGGGGCAGATGTCAGGCGGTGGCCGTGGCCCCTAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR GCA 90 bp GCCCAGGGCCAGGCCAGCCTTTGGCACAATTCGGGGAGGATGGTAGTTGGGAGGGGCAAAGGTCTCATTTaGCTTGAGGATAACGCGGTC +
Preference number: 4 (lower is better)
Translates to: AQGQASLWHNSGRMVVGRGKGLI*LEDNAV
Trigger: GACCGCGTTATCCTCAAGGCAAATGAGACCTTTGCC...CCTCCCAACTACCATCCTCCCCGAATTGTGCCAAAGGCTGGCCTGGCCCTGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR GCA 90 bp GCCCAGCTTCTCCGTTCCTGTCATTCCACCAGGGCTGAGGCAGCCACATTCACGGATGCTGCTGCAGCCTaGCTTGCTCCAAGAAGCTTC +
Preference number: 4 (lower is better)
Translates to: AQLLRSCHSTRAEAATFTDAAAA*LAPRSF
Trigger: GAAGCTTCTTGGAGCAAGGCAGGCTGCAGCAGCATC...CGTGAATGTGGCTGCCTCAGCCCTGGTGGAATGACAGGAACGGAGAAGCTGGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR GCA 90 bp GCCCAGCTTCTCCGTTCCTGTCATTCCACCAGGGCTGAGGCAGCCACATTCACGTGTAACCACTGCAGATaGTGCTGCAGCCTGCCTTGC +
Preference number: 4 (lower is better)
Translates to: AQLLRSCHSTRAEAATFTCNHCR*CCSLPC
Trigger: GCAAGGCAGGCTGCAGCAGCATCTGCAGTGGTTACA...CGTGAATGTGGCTGCCTCAGCCCTGGTGGAATGACAGGAACGGAGAAGCTGGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR GCA 90 bp ACTAGGGGCCACGGCCACCGCCTGACATCTGCCCCACACAGCTGCATCCCTGATGGTTCGACCACGTCATaGCCCACAAATGTGTTGATG +
Preference number: 4 (lower is better)
Translates to: TRGHGHRLTSAPHSCIPDGSTTS*PTNVLM
Trigger: CATCAACACATTTGTGGGGCATGACGTGGTCGAACC...ATCAGGGATGCAGCTGTGTGGGGCAGATGTCAGGCGGTGGCCGTGGCCCCTAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR GCA 90 bp GCCAGCAAGCCCAGCTTCTCCGTTCCTGTCATTCCACCAGGGCTGAGGCAGCCAACATGCCCAGGTTCTTaGGGATCTCATCCATCTCGG +
Preference number: 4 (lower is better)
Translates to: ASKPSFSVPVIPPGLRQPTCPGS*GSHPSR
Trigger: CCGAGATGGATGAGATCCGCAAGAACCTGGGCATGT...TGGCTGCCTCAGCCCTGGTGGAATGACAGGAACGGAGAAGCTGGGCTTGCTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR GCA 90 bp CCAGGACCCAAGGCTTTAAGGCAAAGCAGGGTGAGGGTATGTGCAGCCCAGGGCGGAGGTGCCAGGTTCTaGAGGCTGCTTGACCAATGT +
Preference number: 4 (lower is better)
Translates to: PGPKALRQSRVRVCAAQGGGARF*RLLDQC
Trigger: ACATTGGTCAAGCAGCCTGCAGAACCTGGCACCTCC...GCCCTGGGCTGCACATACCCTCACCCTGCTTTGCCTTAAAGCCTTGGGTCCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR GCA 90 bp GCCCAGCTTCTCCGTTCCTGTCATTCCACCAGGGCTGAGGCAGCCACATTCACGTGTAGGAGAGCTCGGTaGTCGTGTCTGAGACCAGCA +
Preference number: 4 (lower is better)
Translates to: AQLLRSCHSTRAEAATFTCRRAR*SCLRPA
Trigger: TGCTGGTCTCAGACACGAGCACCGAGCTCTCCTACA...CGTGAATGTGGCTGCCTCAGCCCTGGTGGAATGACAGGAACGGAGAAGCTGGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR GCA 90 bp CAAGCCCAGCTTCTCCGTTCCTGTCATTCCACCAGGGCTGAGGCAGCCACATTCCAGCGGACTGGCTCATaGACTAGGCGTGGCAGAGAA +
Preference number: 4 (lower is better)
Translates to: QAQLLRSCHSTRAEAATFQRTGS*TRRGRE
Trigger: TTCTCTGCCACGCCTAGTGCATGAGCCAGTCCGCTG...GAATGTGGCTGCCTCAGCCCTGGTGGAATGACAGGAACGGAGAAGCTGGGCTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR GCA 90 bp CCCAAGGCTTTAAGGCAAAGCAGGGTGAGGGTATGTGCAGCCCAGGGCCAGGCCCCGGGCACCAAAGGATaGTGGGATAGACTTCTGAAC +
Preference number: 4 (lower is better)
Translates to: PKALRQSRVRVCAAQGQAPGTKG*WDRLLN
Trigger: GTTCAGAAGTCTATCCCAGCATCCTTTGGTGCCCGG...GGCCTGGCCCTGGGCTGCACATACCCTCACCCTGCTTTGCCTTAAAGCCTTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR GCA 90 bp CAAGCCCAGCTTCTCCGTTCCTGTCATTCCACCAGGGCTGAGGCAGCCACATTCGCAAAGGCGGTCCACTaGCAGGATCCGGCCAATCTT +
Preference number: 4 (lower is better)
Translates to: QAQLLRSCHSTRAEAATFAKAVH*QDPANL
Trigger: AAGATTGGCCGGATCCTGGCAGTGGACCGCCTTTGC...GAATGTGGCTGCCTCAGCCCTGGTGGAATGACAGGAACGGAGAAGCTGGGCTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR GCA 90 bp CCAGGACCCAAGGCTTTAAGGCAAAGCAGGGTGAGGGTATGTGCAGCCCAGGGCCCTCACACTCCTCCATaGTGTGTGACGTCAGCACCA +
Preference number: 4 (lower is better)
Translates to: PGPKALRQSRVRVCAAQGPHTPP*CVTSAP
Trigger: TGGTGCTGACGTCACACAGCATGGAGGAGTGTGAGG...GCCCTGGGCTGCACATACCCTCACCCTGCTTTGCCTTAAAGCCTTGGGTCCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR CCA 90 bp CCCAAGGCTTTAAGGCAAAGCAGGGTGAGGGTATGTGCAGCCCAGGGCCAGGCCATGAAACTGCAGGTCTaGCTGAGTGACTCTCCCAGG +
Preference number: 4 (lower is better)
Translates to: PKALRQSRVRVCAAQGQAMKLQV*LSDSPR
Trigger: CCTGGGAGAGTCACTCAGCCAGACCTGCAGTTTCAT...GGCCTGGCCCTGGGCTGCACATACCCTCACCCTGCTTTGCCTTAAAGCCTTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR CCA 90 bp CCCAAGGCTTTAAGGCAAAGCAGGGTGAGGGTATGTGCAGCCCAGGGCCAGGCCTATGCTGGATGGTCATaGCCACAGAGTAGACCCAGG +
Preference number: 4 (lower is better)
Translates to: PKALRQSRVRVCAAQGQAYAGWS*PQSRPR
Trigger: CCTGGGTCTACTCTGTGGCCATGACCATCCAGCATA...GGCCTGGCCCTGGGCTGCACATACCCTCACCCTGCTTTGCCTTAAAGCCTTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR CCA 90 bp TGTGTGACTAGGGGCCACGGCCACCGCCTGACATCTGCCCCACACAGCTGCATCACAGTGCAAAGTACTTaGAACCCAGGCCAAAGGCTG +
Preference number: 4 (lower is better)
Translates to: CVTRGHGHRLTSAPHSCITVQST*NPGQRL
Trigger: CAGCCTTTGGCCTGGGTTCCAAGTACTTTGCACTGT...GATGCAGCTGTGTGGGGCAGATGTCAGGCGGTGGCCGTGGCCCCTAGTCACACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR CCA 90 bp CAAGCCCAGCTTCTCCGTTCCTGTCATTCCACCAGGGCTGAGGCAGCCACATTCCTGAACGTGTGCCACTaGATGCCCACTCCTGCCACT +
Preference number: 4 (lower is better)
Translates to: QAQLLRSCHSTRAEAATFLNVCH*MPTPAT
Trigger: AGTGGCAGGAGTGGGCATCCAGTGGCACACGTTCAG...GAATGTGGCTGCCTCAGCCCTGGTGGAATGACAGGAACGGAGAAGCTGGGCTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR CCA 90 bp CCAGGACCCAAGGCTTTAAGGCAAAGCAGGGTGAGGGTATGTGCAGCCCAGGGCCACGAAGTTGGACAGTaGCAGCCCCTGTGTGAAGGA +
Preference number: 4 (lower is better)
Translates to: PGPKALRQSRVRVCAAQGHEVGQ*QPLCEG
Trigger: TCCTTCACACAGGGGCTGCCACTGTCCAACTTCGTG...GCCCTGGGCTGCACATACCCTCACCCTGCTTTGCCTTAAAGCCTTGGGTCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR CCA 90 bp GCCCAGGGCCAGGCCAGCCTTTGGCACAATTCGGGGAGGATGGTAGTTGGGAGGCGAACTGCAGGTGTTTaGCCTTGGTGGATTTCTCTG +
Preference number: 4 (lower is better)
Translates to: AQGQASLWHNSGRMVVGRRTAGV*PWWISL
Trigger: CAGAGAAATCCACCAAGGCCAAACACCTGCAGTTCG...CCTCCCAACTACCATCCTCCCCGAATTGTGCCAAAGGCTGGCCTGGCCCTGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR CCA 90 bp AGCCTTTGGCACAATTCGGGGAGGATGGTAGTTGGGAGGAGGGCAGGAGCCCTTCTGTTCTTAAGGTGCTaGATGCTGCCCAGGCAGCGC +
Preference number: 4 (lower is better)
Translates to: SLWHNSGRMVVGRRAGALLFLRC*MLPRQR
Trigger: GCGCTGCCTGGGCAGCATCCAGCACCTTAAGAACAG...AAGGGCTCCTGCCCTCCTCCCAACTACCATCCTCCCCGAATTGTGCCAAAGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR TCA 90 bp CCCAAGGCTTTAAGGCAAAGCAGGGTGAGGGTATGTGCAGCCCAGGGCCAGGCCAGAGGACAAGCGGGATaGAGATCTCAAAAGCCAGGA +
Preference number: 4 (lower is better)
Translates to: PKALRQSRVRVCAAQGQARGQAG*RSQKPG
Trigger: TCCTGGCTTTTGAGATCTTCATCCCGCTTGTCCTCT...GGCCTGGCCCTGGGCTGCACATACCCTCACCCTGCTTTGCCTTAAAGCCTTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR TCA 90 bp CAAGCCCAGCTTCTCCGTTCCTGTCATTCCACCAGGGCTGAGGCAGCCACATTCCTGGGAAGTTCCTGTTaGAGAACCGCACCACGTCCT +
Preference number: 4 (lower is better)
Translates to: QAQLLRSCHSTRAEAATFLGSSC*RTAPRP
Trigger: AGGACGTGGTGCGGTTCTTCAACAGGAACTTCCCAG...GAATGTGGCTGCCTCAGCCCTGGTGGAATGACAGGAACGGAGAAGCTGGGCTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR TCA 90 bp CCAGGACCCAAGGCTTTAAGGCAAAGCAGGGTGAGGGTATGTGCAGCCCAGGGCCAGCGAGATGTGCTCTaGCTTGAGCTGATACTGCAC +
Preference number: 4 (lower is better)
Translates to: PGPKALRQSRVRVCAAQGQRDVL*LELILH
Trigger: GTGCAGTATCAGCTCAAGTCAGAGCACATCTCGCTG...GCCCTGGGCTGCACATACCCTCACCCTGCTTTGCCTTAAAGCCTTGGGTCCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR TCA 90 bp CCAGGACCCAAGGCTTTAAGGCAAAGCAGGGTGAGGGTATGTGCAGCCCAGGGCATCTTGCTGAACACCTaGGCCAGCGAGATGTGCTCT +
Preference number: 4 (lower is better)
Translates to: PGPKALRQSRVRVCAAQGILLNT*ASEMCS
Trigger: AGAGCACATCTCGCTGGCTCAGGTGTTCAGCAAGAT...GCCCTGGGCTGCACATACCCTCACCCTGCTTTGCCTTAAAGCCTTGGGTCCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR GCA 90 bp CCAGGACCCAAGGCTTTAAGGCAAAGCAGGGTGAGGGTATGTGCAGCCCAGGGCGTCTGCACCAGTGAGTaGCGCTTGTTAGAGAGTTCC +
Preference number: 4 (lower is better)
Translates to: PGPKALRQSRVRVCAAQGVCTSE*RLLESS
Trigger: GGAACTCTCTAACAAGCGGCACTCACTGGTGCAGAC...GCCCTGGGCTGCACATACCCTCACCCTGCTTTGCCTTAAAGCCTTGGGTCCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR GCA 90 bp ACATTCACGGCTTCCCATGGTAGCCTAACTTCTGTACCACAGCCAAGTGAGGGACCTCGAGTTTGCGGCTaGCCTGGCCCACCTGAGCCA +
Preference number: 4 (lower is better)
Translates to: TFTASHGSLTSVPQPSEGPRVCG*PGPPEP
Trigger: TGGCTCAGGTGGGCCAGGGCAGCCGCAAACTCGAGG...TCCCTCACTTGGCTGTGGTACAGAAGTTAGGCTACCATGGGAAGCCGTGAATGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR GCA 90 bp GGTAGTTGGGAGGAGGGCAGGAGCCCTTTGGTCCTGAACCTGCCTTTCCAGGGCCTGCTGGATTGCCCTTaGTTTTGGGTAGGTTTGCAC +
Preference number: 4 (lower is better)
Translates to: GSWEEGRSPLVLNLPFQGLLDCP*FWVGLH
Trigger: GTGCAAACCTACCCAAAAGCAAGGGCAATCCAGCAG...GCCCTGGAAAGGCAGGTTCAGGACCAAAGGGCTCCTGCCCTCCTCCCAACTACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR GCA 90 bp GCCCAGGGCCAGGCCAGCCTTTGGCACAATTCGGGGAGGATGGTAGTTGGGAGGTCATGCTCAAAAAGCTaGAGAAGGAAAGTGGCCACC +
Preference number: 4 (lower is better)
Translates to: AQGQASLWHNSGRMVVGRSCSKS*RRKVAT
Trigger: GGTGGCCACTTTCCTTCTGCAGCTTTTTGAGCATGA...CCTCCCAACTACCATCCTCCCCGAATTGTGCCAAAGGCTGGCCTGGCCCTGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR GCA 90 bp AGCCTTTGGCACAATTCGGGGAGGATGGTAGTTGGGAGGAGGGCAGGAGCCCTTTGCCTCCACTGTAGGTaGCAGCTGGCTTGTCTGCAT +
Preference number: 4 (lower is better)
Translates to: SLWHNSGRMVVGRRAGALCLHCR*QLACLH
Trigger: ATGCAGACAAGCCAGCTGGCACCTACAGTGGAGGCA...AAGGGCTCCTGCCCTCCTCCCAACTACCATCCTCCCCGAATTGTGCCAAAGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR GCA 90 bp GCCCAGCTTCTCCGTTCCTGTCATTCCACCAGGGCTGAGGCAGCCACATTCACGAACCTGTTCTTAAGGTaGTGGATGCTGCCCAGGCAG +
Preference number: 4 (lower is better)
Translates to: AQLLRSCHSTRAEAATFTNLFLR*WMLPRQ
Trigger: CTGCCTGGGCAGCATCCAGCACCTTAAGAACAGGTT...CGTGAATGTGGCTGCCTCAGCCCTGGTGGAATGACAGGAACGGAGAAGCTGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR GCA 90 bp AGCCTTTGGCACAATTCGGGGAGGATGGTAGTTGGGAGGAGGGCAGGAGCCCTTCTGAGTAATCCTCGATaGCCAGCACACCCACCACCT +
Preference number: 4 (lower is better)
Translates to: SLWHNSGRMVVGRRAGALLSNPR*PAHPPP
Trigger: AGGTGGTGGGTGTGCTGGGCATCGAGGATTACTCAG...AAGGGCTCCTGCCCTCCTCCCAACTACCATCCTCCCCGAATTGTGCCAAAGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR CCA 90 bp CAAGCCCAGCTTCTCCGTTCCTGTCATTCCACCAGGGCTGAGGCAGCCACATTCCCTTCACAGAGATGGTaGGCTTCTTCTGCCGCAGTC +
Preference number: 4 (lower is better)
Translates to: QAQLLRSCHSTRAEAATFPSQRW*ASSAAV
Trigger: GACTGCGGCAGAAGAAGCCCACCATCTCTGTGAAGG...GAATGTGGCTGCCTCAGCCCTGGTGGAATGACAGGAACGGAGAAGCTGGGCTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR CCA 90 bp GCCCAGCTTCTCCGTTCCTGTCATTCCACCAGGGCTGAGGCAGCCACATTCACGAGCAGCTCCTCCATTTaGAGCAGAGGATTGCTACCC +
Preference number: 4 (lower is better)
Translates to: AQLLRSCHSTRAEAATFTSSSSI*SRGLLP
Trigger: GGGTAGCAATCCTCTGCTCCAAATGGAGGAGCTGCT...CGTGAATGTGGCTGCCTCAGCCCTGGTGGAATGACAGGAACGGAGAAGCTGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR CCA 90 bp CAGTCAAGGGTGTCCATGAAAAGACATCTGTGCAAGATGCTGGCCTGGGTAGACGACGGTGCCTGTGGCTaGGGATCTGAGCCGTTGGGG +
Preference number: 4 (lower is better)
Translates to: QSRVSMKRHLCKMLAWVDDGACG*GSEPLG
Trigger: CCCCAACGGCTCAGATCCCCAGCCACAGGCACCGTC...GTCTACCCAGGCCAGCATCTTGCACAGATGTCTTTTCATGGACACCCTTGACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR CCA 90 bp AAGGGTGTCCATGAAAAGACATCTGTGCAAGATGCTGGCCTGGGTAGACTTGCGCTGGCGCAGAGCAGGTaGCAGCTCCTCCAGGGACAG +
Preference number: 4 (lower is better)
Translates to: KGVHEKTSVQDAGLGRLALAQSR*QLLQGQ
Trigger: CTGTCCCTGGAGGAGCTGCCACCTGCTCTGCGCCAG...CGCAAGTCTACCCAGGCCAGCATCTTGCACAGATGTCTTTTCATGGACACCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR CCA 90 bp CAAGCCCAGCTTCTCCGTTCCTGTCATTCCACCAGGGCTGAGGCAGCCACATTCCCGTCCTTCCGTGTCTaGAAGATCACGCTGGCAAAC +
Preference number: 4 (lower is better)
Translates to: QAQLLRSCHSTRAEAATFPSFRV*KITLAN
Trigger: GTTTGCCAGCGTGATCTTCCAGACACGGAAGGACGG...GAATGTGGCTGCCTCAGCCCTGGTGGAATGACAGGAACGGAGAAGCTGGGCTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR CCA 90 bp ACCCAAGGCTTTAAGGCAAAGCAGGGTGAGGGTATGTGCAGCCCAGGGCCAGGCGAGAGCAGAGAGCTTTaGAGTTCCGACGAGCACAGT +
Preference number: 4 (lower is better)
Translates to: TQGFKAKQGEGMCSPGPGESREL*SSDEHS
Trigger: ACTGTGCTCGTCGGAACTCCAAAGCTCTCTGCTCTC...GCCTGGCCCTGGGCTGCACATACCCTCACCCTGCTTTGCCTTAAAGCCTTGGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR CCA 90 bp GCCCAGGGCCAGGCCAGCCTTTGGCACAATTCGGGGAGGATGGTAGTTGGGAGGCTTGAGCATGGCCTCTaGGAAGTTCCTGTTGAAGAA +
Preference number: 4 (lower is better)
Translates to: AQGQASLWHNSGRMVVGRLEHGL*EVPVEE
Trigger: TTCTTCAACAGGAACTTCCCAGAGGCCATGCTCAAG...CCTCCCAACTACCATCCTCCCCGAATTGTGCCAAAGGCTGGCCTGGCCCTGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR TCA 90 bp AGCCTTTGGCACAATTCGGGGAGGATGGTAGTTGGGAGGAGGGCAGGAGCCCTTCCTGGTAGGCCTGATTaGGAGTGTAGTTCACGATGC +
Preference number: 4 (lower is better)
Translates to: SLWHNSGRMVVGRRAGALPGRPD*ECSSRC
Trigger: GCATCGTGAACTACACTCTCAATCAGGCCTACCAGG...AAGGGCTCCTGCCCTCCTCCCAACTACCATCCTCCCCGAATTGTGCCAAAGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR TCA 90 bp ACATTCACGGCTTCCCATGGTAGCCTAACTTCTGTACCACAGCCAAGTGAGGGAGGTGCTCCTCCACCGTaGGCCGGTCAAAGAGCACGT +
Preference number: 4 (lower is better)
Translates to: TFTASHGSLTSVPQPSEGGAPPP*AGQRAR
Trigger: ACGTGCTCTTTGACCGGCTCACGGTGGAGGAGCACC...TCCCTCACTTGGCTGTGGTACAGAAGTTAGGCTACCATGGGAAGCCGTGAATGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR TCA 90 bp CAAGCCCAGCTTCTCCGTTCCTGTCATTCCACCAGGGCTGAGGCAGCCACATTCCCTGTGCCATGCTTTTaGGGCGTGAGTAGAACCAGA +
Preference number: 4 (lower is better)
Translates to: QAQLLRSCHSTRAEAATFPVPCF*GVSRTR
Trigger: TCTGGTTCTACTCACGCCTCAAAAGCATGGCACAGG...GAATGTGGCTGCCTCAGCCCTGGTGGAATGACAGGAACGGAGAAGCTGGGCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR TCA 90 bp ACATTCACGGCTTCCCATGGTAGCCTAACTTCTGTACCACAGCCAAGTGAGGGACTCGGTGCTCGTGTCTaGGACCAGCAGGGAGGAAGC +
Preference number: 4 (lower is better)
Translates to: TFTASHGSLTSVPQPSEGLGARV*DQQGGS
Trigger: GCTTCCTCCCTGCTGGTCTCAGACACGAGCACCGAG...TCCCTCACTTGGCTGTGGTACAGAAGTTAGGCTACCATGGGAAGCCGTGAATGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR GCA 90 bp GCCCAGCTTCTCCGTTCCTGTCATTCCACCAGGGCTGAGGCAGCCACATTCACGAGGACATCCACATCCTaGAGAAGTTTCTGGGCATCC +
Preference number: 4 (lower is better)
Translates to: AQLLRSCHSTRAEAATFTRTSTS*RSFWAS
Trigger: GGATGCCCAGAAACTTCTGCAGGATGTGGATGTCCT...CGTGAATGTGGCTGCCTCAGCCCTGGTGGAATGACAGGAACGGAGAAGCTGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR GCA 90 bp GGTAGTTGGGAGGAGGGCAGGAGCCCTTTGGTCCTGAACCTGCCTTTCCAGGGCCCCAGGAGATCACCATaGACAATGGCATCATGTGTT +
Preference number: 4 (lower is better)
Translates to: GSWEEGRSPLVLNLPFQGPRRSP*TMASCV
Trigger: AACACATGATGCCATTGTGCATGGTGATCTCCTGGG...GCCCTGGAAAGGCAGGTTCAGGACCAAAGGGCTCCTGCCCTCCTCCCAACTACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR GCA 90 bp CAGTCAAGGGTGTCCATGAAAAGACATCTGTGCAAGATGCTGGCCTGGGTAGACTGGGCTCCTCCTCCATaGCGCGGGTCTCCTCGAAGT +
Preference number: 4 (lower is better)
Translates to: QSRVSMKRHLCKMLAWVDWAPPP*RGSPRS
Trigger: ACTTCGAGGAGACCCGCGGCATGGAGGAGGAGCCCA...GTCTACCCAGGCCAGCATCTTGCACAGATGTCTTTTCATGGACACCCTTGACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR GCA 90 bp GCCCAGCTTCTCCGTTCCTGTCATTCCACCAGGGCTGAGGCAGCCACATTCACGAAAGCTTGCGCTTCATaGCTCCAGACAACGTCTGCA +
Preference number: 4 (lower is better)
Translates to: AQLLRSCHSTRAEAATFTKACAS*LQTTSA
Trigger: TGCAGACGTTGTCTGGAGGCATGAAGCGCAAGCTTT...CGTGAATGTGGCTGCCTCAGCCCTGGTGGAATGACAGGAACGGAGAAGCTGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR GCA 90 bp CAAGCCCAGCTTCTCCGTTCCTGTCATTCCACCAGGGCTGAGGCAGCCACATTCACAGAGGATGCAGACTaGAGCGATGCCTGTGACTGT +
Preference number: 4 (lower is better)
Translates to: QAQLLRSCHSTRAEAATFTEDAD*SDACDC
Trigger: ACAGTCACAGGCATCGCTGCAGTCTGCATCCTCTGT...GAATGTGGCTGCCTCAGCCCTGGTGGAATGACAGGAACGGAGAAGCTGGGCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR GCA 90 bp TGTGTGACTAGGGGCCACGGCCACCGCCTGACATCTGCCCCACACAGCTGCATCCTTGGTGGATTTCTCTaGCACAAGGAAGACCACAAA +
Preference number: 4 (lower is better)
Translates to: CVTRGHGHRLTSAPHSCILGGFL*HKEDHK
Trigger: TTTGTGGTCTTCCTTGTGGCAGAGAAATCCACCAAG...GATGCAGCTGTGTGGGGCAGATGTCAGGCGGTGGCCGTGGCCCCTAGTCACACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR CCA 90 bp AGCCTTTGGCACAATTCGGGGAGGATGGTAGTTGGGAGGAGGGCAGGAGCCCTTCTTCCTTCACAGAGATaGTGGGCTTCTTCTGCCGCA +
Preference number: 4 (lower is better)
Translates to: SLWHNSGRMVVGRRAGALLPSQR*WASSAA
Trigger: TGCGGCAGAAGAAGCCCACCATCTCTGTGAAGGAAG...AAGGGCTCCTGCCCTCCTCCCAACTACCATCCTCCCCGAATTGTGCCAAAGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR CCA 90 bp CAGTCAAGGGTGTCCATGAAAAGACATCTGTGCAAGATGCTGGCCTGGGTAGACCGCCAAAGCTCTCTCTaGTCCCTGGCCACCGAGTCC +
Preference number: 4 (lower is better)
Translates to: QSRVSMKRHLCKMLAWVDRQSSL*SLATES
Trigger: GGACTCGGTGGCCAGGGACCAGAGAGAGCTTTGGCG...GTCTACCCAGGCCAGCATCTTGCACAGATGTCTTTTCATGGACACCCTTGACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR CCA 90 bp CAAGCCCAGCTTCTCCGTTCCTGTCATTCCACCAGGGCTGAGGCAGCCACATTCCAGTTCCCCAGAACCTaGAGCACATGTGAGCTGTTC +
Preference number: 4 (lower is better)
Translates to: QAQLLRSCHSTRAEAATFQFPRT*STCELF
Trigger: GAACAGCTCACATGTGCTCCAGGTTCTGGGGAACTG...GAATGTGGCTGCCTCAGCCCTGGTGGAATGACAGGAACGGAGAAGCTGGGCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR CCA 90 bp CAAGCCCAGCTTCTCCGTTCCTGTCATTCCACCAGGGCTGAGGCAGCCACATTCTGTTGCCACACAAGATaGGTTGCAAGCCAGCCCAGA +
Preference number: 4 (lower is better)
Translates to: QAQLLRSCHSTRAEAATFCCHTR*VASQPR
Trigger: TCTGGGCTGGCTTGCAACCCATCTTGTGTGGCAACA...GAATGTGGCTGCCTCAGCCCTGGTGGAATGACAGGAACGGAGAAGCTGGGCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR CCA 90 bp GCCCAGCTTCTCCGTTCCTGTCATTCCACCAGGGCTGAGGCAGCCACATTCACGGGTGTAGCAGGGGTATaGGAACATCTGCACGTAGTT +
Preference number: 4 (lower is better)
Translates to: AQLLRSCHSTRAEAATFTGVAGV*EHLHVV
Trigger: AACTACGTGCAGATGTTCCCATACCCCTGCTACACC...CGTGAATGTGGCTGCCTCAGCCCTGGTGGAATGACAGGAACGGAGAAGCTGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR CCA 90 bp CCCAAGGCTTTAAGGCAAAGCAGGGTGAGGGTATGTGCAGCCCAGGGCCAGGCCCCACAATATGCTGGATaGTCATGGCCACAGAGTAGA +
Preference number: 4 (lower is better)
Translates to: PKALRQSRVRVCAAQGQAPQYAG*SWPQSR
Trigger: TCTACTCTGTGGCCATGACCATCCAGCATATTGTGG...GGCCTGGCCCTGGGCTGCACATACCCTCACCCTGCTTTGCCTTAAAGCCTTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR CCA 90 bp ACATTCACGGCTTCCCATGGTAGCCTAACTTCTGTACCACAGCCAAGTGAGGGAGCCAGCCCTGGCTCTTaGGAGGTGCCAGGTTCTGCA +
Preference number: 4 (lower is better)
Translates to: TFTASHGSLTSVPQPSEGASPGS*EVPGSA
Trigger: TGCAGAACCTGGCACCTCCCAAGAGCCAGGGCTGGC...TCCCTCACTTGGCTGTGGTACAGAAGTTAGGCTACCATGGGAAGCCGTGAATGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR CCA 90 bp ACATTCACGGCTTCCCATGGTAGCCTAACTTCTGTACCACAGCCAAGTGAGGGACCAGCTGCTGGGGGCTaGCATCAGGTGACAGCCGTA +
Preference number: 4 (lower is better)
Translates to: TFTASHGSLTSVPQPSEGPAAGG*HQVTAV
Trigger: TACGGCTGTCACCTGATGCCAGCCCCCAGCAGCTGG...TCCCTCACTTGGCTGTGGTACAGAAGTTAGGCTACCATGGGAAGCCGTGAATGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR CCA 90 bp GGTAGTTGGGAGGAGGGCAGGAGCCCTTTGGTCCTGAACCTGCCTTTCCAGGGCACGTCCTTCACGTTCTaGCTGCTTTTGGTCCTTACA +
Preference number: 4 (lower is better)
Translates to: GSWEEGRSPLVLNLPFQGTSFTF*LLLVLT
Trigger: TGTAAGGACCAAAAGCAGCCAGAACGTGAAGGACGT...GCCCTGGAAAGGCAGGTTCAGGACCAAAGGGCTCCTGCCCTCCTCCCAACTACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR TCA 90 bp CAAGCCCAGCTTCTCCGTTCCTGTCATTCCACCAGGGCTGAGGCAGCCACATTCCAGCAAGGAGCAGATTaGAGTCATCTCCTTCCACTG +
Preference number: 4 (lower is better)
Translates to: QAQLLRSCHSTRAEAATFQQGAD*SHLLPL
Trigger: CAGTGGAAGGAGATGACTTCAATCTGCTCCTTGCTG...GAATGTGGCTGCCTCAGCCCTGGTGGAATGACAGGAACGGAGAAGCTGGGCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR TCA 90 bp CCAGGACCCAAGGCTTTAAGGCAAAGCAGGGTGAGGGTATGTGCAGCCCAGGGCTCTTATAGACCTTGGTaGGCTTGTCCACACAGACGA +
Preference number: 4 (lower is better)
Translates to: PGPKALRQSRVRVCAAQGSYRPW*ACPHRR
Trigger: TCGTCTGTGTGGACAAGCTCACCAAGGTCTATAAGA...GCCCTGGGCTGCACATACCCTCACCCTGCTTTGCCTTAAAGCCTTGGGTCCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR TCA 90 bp ACCCAAGGCTTTAAGGCAAAGCAGGGTGAGGGTATGTGCAGCCCAGGGCCAGGCAAACATTGTGGCCAGTaGTGTCAGTCAGGATGTCAC +
Preference number: 4 (lower is better)
Translates to: TQGFKAKQGEGMCSPGPGKHCGQ*CQSGCH
Trigger: GTGACATCCTGACTGACATCACTGGCCACAATGTTT...GCCTGGCCCTGGGCTGCACATACCCTCACCCTGCTTTGCCTTAAAGCCTTGGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR GCA 90 bp CCAGGACCCAAGGCTTTAAGGCAAAGCAGGGTGAGGGTATGTGCAGCCCAGGGCCCTGTGCTCTTTCTCTaGCACAATATGCTGGATGGT +
Preference number: 4 (lower is better)
Translates to: PGPKALRQSRVRVCAAQGPVLFL*HNMLDG
Trigger: ACCATCCAGCATATTGTGGCAGAGAAAGAGCACAGG...GCCCTGGGCTGCACATACCCTCACCCTGCTTTGCCTTAAAGCCTTGGGTCCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR GCA 90 bp ACATTCACGGCTTCCCATGGTAGCCTAACTTCTGTACCACAGCCAAGTGAGGGACTGGCTCTTGGGAGGTaGCAGGTTCTGCAGGCTGCT +
Preference number: 4 (lower is better)
Translates to: TFTASHGSLTSVPQPSEGLALGR*QVLQAA
Trigger: AGCAGCCTGCAGAACCTGGCACCTCCCAAGAGCCAG...TCCCTCACTTGGCTGTGGTACAGAAGTTAGGCTACCATGGGAAGCCGTGAATGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR GCA 90 bp GCCCAGCTTCTCCGTTCCTGTCATTCCACCAGGGCTGAGGCAGCCACATTCACGACATTGTCTGGGTCCTaGAAGTTGTCAAAGAGGGGA +
Preference number: 4 (lower is better)
Translates to: AQLLRSCHSTRAEAATFTTLSGS*KLSKRG
Trigger: TCCCCTCTTTGACAACTTGCAGGACCCAGACAATGT...CGTGAATGTGGCTGCCTCAGCCCTGGTGGAATGACAGGAACGGAGAAGCTGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR CCA 90 bp ACATTCACGGCTTCCCATGGTAGCCTAACTTCTGTACCACAGCCAAGTGAGGGAGCTCTCTCTGGTCCCTaGCCACCGAGTCCAGAGAGA +
Preference number: 4 (lower is better)
Translates to: TFTASHGSLTSVPQPSEGALSGP*PPSPER
Trigger: TCTCTCTGGACTCGGTGGCCAGGGACCAGAGAGAGC...TCCCTCACTTGGCTGTGGTACAGAAGTTAGGCTACCATGGGAAGCCGTGAATGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR CCA 90 bp ACATTCACGGCTTCCCATGGTAGCCTAACTTCTGTACCACAGCCAAGTGAGGGAGGGCTGACAGGTGACTaGGTGCCCTCCTCAACAGTG +
Preference number: 4 (lower is better)
Translates to: TFTASHGSLTSVPQPSEGGLTGD*VPSSTV
Trigger: CACTGTTGAGGAGGGCACCCAGTCACCTGTCAGCCC...TCCCTCACTTGGCTGTGGTACAGAAGTTAGGCTACCATGGGAAGCCGTGAATGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR CCA 90 bp AGCCTTTGGCACAATTCGGGGAGGATGGTAGTTGGGAGGAGGGCAGGAGCCCTTTCTGCCACAATATGCTaGATGGTCATGGCCACAGAG +
Preference number: 4 (lower is better)
Translates to: SLWHNSGRMVVGRRAGALSATIC*MVMATE
Trigger: CTCTGTGGCCATGACCATCCAGCATATTGTGGCAGA...AAGGGCTCCTGCCCTCCTCCCAACTACCATCCTCCCCGAATTGTGCCAAAGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR CCA 90 bp AAGGGTGTCCATGAAAAGACATCTGTGCAAGATGCTGGCCTGGGTAGACTTGCGCCTTCCACTGGGGACTaGCTGAACGTGTGCCACTGG +
Preference number: 4 (lower is better)
Translates to: KGVHEKTSVQDAGLGRLAPSTGD*LNVCHW
Trigger: CCAGTGGCACACGTTCAGCCAGTCCCCAGTGGAAGG...CGCAAGTCTACCCAGGCCAGCATCTTGCACAGATGTCTTTTCATGGACACCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR CCA 90 bp AAGGGTGTCCATGAAAAGACATCTGTGCAAGATGCTGGCCTGGGTAGACTTGCGGACAACCTGAGGGGCTaGAAGCCAGCCCTGGCTCTT +
Preference number: 4 (lower is better)
Translates to: KGVHEKTSVQDAGLGRLADNLRG*KPALAL
Trigger: AAGAGCCAGGGCTGGCTTCCAGCCCCTCAGGTTGTC...CGCAAGTCTACCCAGGCCAGCATCTTGCACAGATGTCTTTTCATGGACACCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR CCA 90 bp CAGTCAAGGGTGTCCATGAAAAGACATCTGTGCAAGATGCTGGCCTGGGTAGACGAGGTGGCACGAAGTTaGACAGTGGCAGCCCCTGTG +
Preference number: 4 (lower is better)
Translates to: QSRVSMKRHLCKMLAWVDEVARS*TVAAPV
Trigger: CACAGGGGCTGCCACTGTCCAACTTCGTGCCACCTC...GTCTACCCAGGCCAGCATCTTGCACAGATGTCTTTTCATGGACACCCTTGACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR TCA 90 bp AAGGGTGTCCATGAAAAGACATCTGTGCAAGATGCTGGCCTGGGTAGACTTGCGGAGCTGCACAAAGGCTaGGCACTGCCCTTGCAGAGT +
Preference number: 4 (lower is better)
Translates to: KGVHEKTSVQDAGLGRLAELHKG*ALPLQS
Trigger: ACTCTGCAAGGGCAGTGCTCAGCCTTTGTGCAGCTC...CGCAAGTCTACCCAGGCCAGCATCTTGCACAGATGTCTTTTCATGGACACCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR TCA 90 bp AGCCTTTGGCACAATTCGGGGAGGATGGTAGTTGGGAGGAGGGCAGGAGCCCTTCTGTTCTCCAGTGACTaGTCTTCTTCAGACACCTTG +
Preference number: 4 (lower is better)
Translates to: SLWHNSGRMVVGRRAGALLFSSD*SSSDTL
Trigger: CAAGGTGTCTGAAGAAGATCAGTCACTGGAGAACAG...AAGGGCTCCTGCCCTCCTCCCAACTACCATCCTCCCCGAATTGTGCCAAAGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR TCA 90 bp AAGGGTGTCCATGAAAAGACATCTGTGCAAGATGCTGGCCTGGGTAGACTTGCGCCACCAGTCCACGTGTaGCAATGTCCCACTCGAACG +
Preference number: 4 (lower is better)
Translates to: KGVHEKTSVQDAGLGRLAPPVHV*QCPTRT
Trigger: CGTTCGAGTGGGACATTGTCACACGTGGACTGGTGG...CGCAAGTCTACCCAGGCCAGCATCTTGCACAGATGTCTTTTCATGGACACCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR GCA 90 bp ACATTCACGGCTTCCCATGGTAGCCTAACTTCTGTACCACAGCCAAGTGAGGGACGGCTCCAGGGCTCCTaGTTCCTAAGGAAACCCAAC +
Preference number: 4 (lower is better)
Translates to: TFTASHGSLTSVPQPSEGRLQGS*FLRKPN
Trigger: GTTGGGTTTCCTTAGGAAGCAGGAGCCCTGGAGCCG...TCCCTCACTTGGCTGTGGTACAGAAGTTAGGCTACCATGGGAAGCCGTGAATGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR GCA 90 bp CAGTCAAGGGTGTCCATGAAAAGACATCTGTGCAAGATGCTGGCCTGGGTAGACAAGCCAGCCCAGAGCTaGACAAAGGCTGAGCACTGC +
Preference number: 4 (lower is better)
Translates to: QSRVSMKRHLCKMLAWVDKPAQS*TKAEHC
Trigger: GCAGTGCTCAGCCTTTGTGCAGCTCTGGGCTGGCTT...GTCTACCCAGGCCAGCATCTTGCACAGATGTCTTTTCATGGACACCCTTGACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR GCA 90 bp AAGGGTGTCCATGAAAAGACATCTGTGCAAGATGCTGGCCTGGGTAGACTTGCGCACTGCAGATGCTGCTaGAGCCTGCCTTGCTCCAAG +
Preference number: 4 (lower is better)
Translates to: KGVHEKTSVQDAGLGRLAHCRCC*SLPCSK
Trigger: CTTGGAGCAAGGCAGGCTGCAGCAGCATCTGCAGTG...CGCAAGTCTACCCAGGCCAGCATCTTGCACAGATGTCTTTTCATGGACACCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR GCA 90 bp ACATTCACGGCTTCCCATGGTAGCCTAACTTCTGTACCACAGCCAAGTGAGGGAATGAGCACGTGGCTGTaGATGAGCACCTGGCCGTAC +
Preference number: 4 (lower is better)
Translates to: TFTASHGSLTSVPQPSEGMSTWL*MSTWPY
Trigger: GTACGGCCAGGTGCTCATGCACAGCCACGTGCTCAT...TCCCTCACTTGGCTGTGGTACAGAAGTTAGGCTACCATGGGAAGCCGTGAATGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR GCA 90 bp CAGTCAAGGGTGTCCATGAAAAGACATCTGTGCAAGATGCTGGCCTGGGTAGACCCTCCAGACAACGTCTaGACCAGTGAGTGCCGCTTG +
Preference number: 4 (lower is better)
Translates to: QSRVSMKRHLCKMLAWVDPPDNV*TSECRL
Trigger: CAAGCGGCACTCACTGGTGCAGACGTTGTCTGGAGG...GTCTACCCAGGCCAGCATCTTGCACAGATGTCTTTTCATGGACACCCTTGACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR CCA 90 bp GCCCAGCTTCTCCGTTCCTGTCATTCCACCAGGGCTGAGGCAGCCACATTCACGCCTCAACAGTGGTGTTaGAACCTGAATTTGCACCTA +
Preference number: 4 (lower is better)
Translates to: AQLLRSCHSTRAEAATFTPQQWC*NLNLHL
Trigger: TAGGTGCAAATTCAGGTTCCAACACCACTGTTGAGG...CGTGAATGTGGCTGCCTCAGCCCTGGTGGAATGACAGGAACGGAGAAGCTGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR CCA 90 bp ACATTCACGGCTTCCCATGGTAGCCTAACTTCTGTACCACAGCCAAGTGAGGGACCGCGGGGAAGTTGGTaGGTGATGTGTAGGCAGGTA +
Preference number: 4 (lower is better)
Translates to: TFTASHGSLTSVPQPSEGPRGSW*VMCRQV
Trigger: TACCTGCCTACACATCACCCACCAACTTCCCCGCGG...TCCCTCACTTGGCTGTGGTACAGAAGTTAGGCTACCATGGGAAGCCGTGAATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR TCA 90 bp ACATTCACGGCTTCCCATGGTAGCCTAACTTCTGTACCACAGCCAAGTGAGGGACGCTGGCAAACACTGTaGCATTGTCCTGGTAGGCCT +
Preference number: 4 (lower is better)
Translates to: TFTASHGSLTSVPQPSEGRWQTL*HCPGRP
Trigger: AGGCCTACCAGGACAATGTCACAGTGTTTGCCAGCG...TCCCTCACTTGGCTGTGGTACAGAAGTTAGGCTACCATGGGAAGCCGTGAATGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR TCA 90 bp CAAGCCCAGCTTCTCCGTTCCTGTCATTCCACCAGGGCTGAGGCAGCCACATTCGCATCATGTGTTCAATaGCAAACAGGAAGTCGTCAC +
Preference number: 4 (lower is better)
Translates to: QAQLLRSCHSTRAEAATFASCVQ*QTGSRH
Trigger: GTGACGACTTCCTGTTTGTCATTGAACACATGATGC...GAATGTGGCTGCCTCAGCCCTGGTGGAATGACAGGAACGGAGAAGCTGGGCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR TCA 90 bp AAGGGTGTCCATGAAAAGACATCTGTGCAAGATGCTGGCCTGGGTAGACTTGCGAGCTCAGGAAGTAGATaGTACCGCCACAGGCTGAGG +
Preference number: 4 (lower is better)
Translates to: KGVHEKTSVQDAGLGRLASSGSR*YRHRLR
Trigger: CCTCAGCCTGTGGCGGTATCATCTACTTCCTGAGCT...CGCAAGTCTACCCAGGCCAGCATCTTGCACAGATGTCTTTTCATGGACACCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR TCA 90 bp CCCAAGGCTTTAAGGCAAAGCAGGGTGAGGGTATGTGCAGCCCAGGGCCAGGCCGATTCTCATACAGATTaGGGCTCAGTTTGTTTAAGG +
Preference number: 4 (lower is better)
Translates to: PKALRQSRVRVCAAQGQADSHTD*GSVCLR
Trigger: CCTTAAACAAACTGAGCCTCAATCTGTATGAGAATC...GGCCTGGCCCTGGGCTGCACATACCCTCACCCTGCTTTGCCTTAAAGCCTTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR TCA 90 bp CAGTCAAGGGTGTCCATGAAAAGACATCTGTGCAAGATGCTGGCCTGGGTAGACCAACGTCTGCACCAGTaGGTGCCGCTTGTTAGAGAG +
Preference number: 4 (lower is better)
Translates to: QSRVSMKRHLCKMLAWVDQRLHQ*VPLVRE
Trigger: CTCTCTAACAAGCGGCACTCACTGGTGCAGACGTTG...GTCTACCCAGGCCAGCATCTTGCACAGATGTCTTTTCATGGACACCCTTGACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR GCA 90 bp AAGGGTGTCCATGAAAAGACATCTGTGCAAGATGCTGGCCTGGGTAGACTTGCGACGTGTGCCACTGGATaGCCACTCCTGCCACTTCAT +
Preference number: 4 (lower is better)
Translates to: KGVHEKTSVQDAGLGRLATCATG*PLLPLH
Trigger: ATGAAGTGGCAGGAGTGGGCATCCAGTGGCACACGT...CGCAAGTCTACCCAGGCCAGCATCTTGCACAGATGTCTTTTCATGGACACCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR GCA 90 bp AAGGGTGTCCATGAAAAGACATCTGTGCAAGATGCTGGCCTGGGTAGACTTGCGAGCACACCCACCACCTaGTCCATCTTGCTGAACACC +
Preference number: 4 (lower is better)
Translates to: KGVHEKTSVQDAGLGRLASTPTT*SILLNT
Trigger: GGTGTTCAGCAAGATGGAGCAGGTGGTGGGTGTGCT...CGCAAGTCTACCCAGGCCAGCATCTTGCACAGATGTCTTTTCATGGACACCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR CCA 90 bp ACATTCACGGCTTCCCATGGTAGCCTAACTTCTGTACCACAGCCAAGTGAGGGATCCTGCAGAAGTTTCTaGGCATCCAGCAGGTCCCCT +
Preference number: 4 (lower is better)
Translates to: TFTASHGSLTSVPQPSEGSCRSF*ASSRSP
Trigger: AGGGGACCTGCTGGATGCCCAGAAACTTCTGCAGGA...TCCCTCACTTGGCTGTGGTACAGAAGTTAGGCTACCATGGGAAGCCGTGAATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR CCA 90 bp CCAGGACCCAAGGCTTTAAGGCAAAGCAGGGTGAGGGTATGTGCAGCCCAGGGCGATCACCATGCACAATaGCATCATGTGTTCAATGAC +
Preference number: 4 (lower is better)
Translates to: PGPKALRQSRVRVCAAQGDHHAQ*HHVFND
Trigger: GTCATTGAACACATGATGCCATTGTGCATGGTGATC...GCCCTGGGCTGCACATACCCTCACCCTGCTTTGCCTTAAAGCCTTGGGTCCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR CCA 90 bp AGCCTTTGGCACAATTCGGGGAGGATGGTAGTTGGGAGGAGGGCAGGAGCCCTTTACTCAGAAACATTGTaGCCAGTGATGTCAGTCAGG +
Preference number: 4 (lower is better)
Translates to: SLWHNSGRMVVGRRAGALYSETL*PVMSVR
Trigger: CCTGACTGACATCACTGGCCACAATGTTTCTGAGTA...AAGGGCTCCTGCCCTCCTCCCAACTACCATCCTCCCCGAATTGTGCCAAAGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR CCA 90 bp ACATTCACGGCTTCCCATGGTAGCCTAACTTCTGTACCACAGCCAAGTGAGGGACACGCAGCAGGTGGCTaGGACCAGGTAATTGAGCAT +
Preference number: 4 (lower is better)
Translates to: TFTASHGSLTSVPQPSEGHAAGG*DQVIEH
Trigger: ATGCTCAATTACCTGGTCCCAGCCACCTGCTGCGTG...TCCCTCACTTGGCTGTGGTACAGAAGTTAGGCTACCATGGGAAGCCGTGAATGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR GCA 90 bp AAGGGTGTCCATGAAAAGACATCTGTGCAAGATGCTGGCCTGGGTAGACTTGCGCCACTTCACTACCTGTaGCTCATCCTTCCAGGGGAT +
Preference number: 4 (lower is better)
Translates to: KGVHEKTSVQDAGLGRLAPLHYL*LILPGD
Trigger: ATCCCCTGGAAGGATGAGGCACAGGTAGTGAAGTGG...CGCAAGTCTACCCAGGCCAGCATCTTGCACAGATGTCTTTTCATGGACACCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR CCA 90 bp AAGGGTGTCCATGAAAAGACATCTGTGCAAGATGCTGGCCTGGGTAGACTTGCGCCAAAACTGCTCAGATaGAGCGCATCCAGGCTGTGT +
Preference number: 4 (lower is better)
Translates to: KGVHEKTSVQDAGLGRLAPKLLR*SASRLC
Trigger: ACACAGCCTGGATGCGCTCCATCTGAGCAGTTTTGG...CGCAAGTCTACCCAGGCCAGCATCTTGCACAGATGTCTTTTCATGGACACCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR TCA 90 bp CAGTCAAGGGTGTCCATGAAAAGACATCTGTGCAAGATGCTGGCCTGGGTAGACTCTTCATCACCTCCTTaGGCCTGTGCTCTTTCTCTG +
Preference number: 4 (lower is better)
Translates to: QSRVSMKRHLCKMLAWVDSSSPP*ACALSL
Trigger: CAGAGAAAGAGCACAGGCTCAAGGAGGTGATGAAGA...GTCTACCCAGGCCAGCATCTTGCACAGATGTCTTTTCATGGACACCCTTGACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR TCA 90 bp CAGTCAAGGGTGTCCATGAAAAGACATCTGTGCAAGATGCTGGCCTGGGTAGACACTTCTCGAAGGCAGTaGTCTTGTCATGGGCTACCT +
Preference number: 4 (lower is better)
Translates to: QSRVSMKRHLCKMLAWVDTSRRQ*SCHGLP
Trigger: AGGTAGCCCATGACAAGATCACTGCCTTCGAGAAGT...GTCTACCCAGGCCAGCATCTTGCACAGATGTCTTTTCATGGACACCCTTGACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR TCA 90 bp ACATTCACGGCTTCCCATGGTAGCCTAACTTCTGTACCACAGCCAAGTGAGGGAAGATGTGCTCTGACTTaGGCTGATACTGCACCTTCG +
Preference number: 4 (lower is better)
Translates to: TFTASHGSLTSVPQPSEGRCALT*ADTAPS
Trigger: CGAAGGTGCAGTATCAGCTCAAGTCAGAGCACATCT...TCCCTCACTTGGCTGTGGTACAGAAGTTAGGCTACCATGGGAAGCCGTGAATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR GCA 90 bp AAGGGTGTCCATGAAAAGACATCTGTGCAAGATGCTGGCCTGGGTAGACTTGCGCATAGGCTGCTGGATTaGCCTTGCTTTTGGGTAGGT +
Preference number: 4 (lower is better)
Translates to: KGVHEKTSVQDAGLGRLAHRLLD*PCFWVG
Trigger: ACCTACCCAAAAGCAAGGGCAATCCAGCAGCCTATG...CGCAAGTCTACCCAGGCCAGCATCTTGCACAGATGTCTTTTCATGGACACCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR GCA 90 bp ACATTCACGGCTTCCCATGGTAGCCTAACTTCTGTACCACAGCCAAGTGAGGGAGCCAGCTGGCTTGTCTaGATACTTTGTCAGTTCCAG +
Preference number: 4 (lower is better)
Translates to: TFTASHGSLTSVPQPSEGASWLV*ILCQFQ
Trigger: CTGGAACTGACAAAGTATGCAGACAAGCCAGCTGGC...TCCCTCACTTGGCTGTGGTACAGAAGTTAGGCTACCATGGGAAGCCGTGAATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR CCA 90 bp ACATTCACGGCTTCCCATGGTAGCCTAACTTCTGTACCACAGCCAAGTGAGGGACAGCCCATACATACCTaGGTGCACAGCCTCAATGTA +
Preference number: 4 (lower is better)
Translates to: TFTASHGSLTSVPQPSEGQPIHT*VHSLNV
Trigger: TACATTGAGGCTGTGCACCCAGGTATGTATGGGCTG...TCCCTCACTTGGCTGTGGTACAGAAGTTAGGCTACCATGGGAAGCCGTGAATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR CCA 90 bp AAGGGTGTCCATGAAAAGACATCTGTGCAAGATGCTGGCCTGGGTAGACTTGCGACAACGCCACAGTCATaGCCACACAGACAAAGAAGG +
Preference number: 4 (lower is better)
Translates to: KGVHEKTSVQDAGLGRLATTPQS*PHRQRR
Trigger: CCTTCTTTGTCTGTGTGGCCATGACTGTGGCGTTGT...CGCAAGTCTACCCAGGCCAGCATCTTGCACAGATGTCTTTTCATGGACACCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR TCA 90 bp ACATTCACGGCTTCCCATGGTAGCCTAACTTCTGTACCACAGCCAAGTGAGGGACATCAGGAAATCCCTTaGAGATGTCCACACTCACCT +
Preference number: 4 (lower is better)
Translates to: TFTASHGSLTSVPQPSEGHQEIP*RCPHSP
Trigger: AGGTGAGTGTGGACATCTTCAAGGGATTTCCTGATG...TCCCTCACTTGGCTGTGGTACAGAAGTTAGGCTACCATGGGAAGCCGTGAATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR GCA 90 bp CAGTCAAGGGTGTCCATGAAAAGACATCTGTGCAAGATGCTGGCCTGGGTAGACTTCTCTGCCACAATATaGTGGATGGTCATGGCCACA +
Preference number: 4 (lower is better)
Translates to: QSRVSMKRHLCKMLAWVDFSATI*WMVMAT
Trigger: TGTGGCCATGACCATCCAGCATATTGTGGCAGAGAA...GTCTACCCAGGCCAGCATCTTGCACAGATGTCTTTTCATGGACACCCTTGACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR CCA 90 bp AAGGGTGTCCATGAAAAGACATCTGTGCAAGATGCTGGCCTGGGTAGACTTGCGACTGTAGGTGCCAGCTaGCTTGTCTGCATACTTTGT +
Preference number: 4 (lower is better)
Translates to: KGVHEKTSVQDAGLGRLATVGAS*LVCILC
Trigger: ACAAAGTATGCAGACAAGCCAGCTGGCACCTACAGT...CGCAAGTCTACCCAGGCCAGCATCTTGCACAGATGTCTTTTCATGGACACCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR TCA 90 bp AAGGGTGTCCATGAAAAGACATCTGTGCAAGATGCTGGCCTGGGTAGACTTGCGGCTGGGATAGACTTCTaGACATTACCAAAGGTGATG +
Preference number: 4 (lower is better)
Translates to: KGVHEKTSVQDAGLGRLAAGIDF*TLPKVM
Trigger: CATCACCTTTGGTAATGTTCAGAAGTCTATCCCAGC...CGCAAGTCTACCCAGGCCAGCATCTTGCACAGATGTCTTTTCATGGACACCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR GCA 90 bp CAGTCAAGGGTGTCCATGAAAAGACATCTGTGCAAGATGCTGGCCTGGGTAGACGTGGAGTTGGCATATTaGAGGAAGCCAAACTCATCA +
Preference number: 4 (lower is better)
Translates to: QSRVSMKRHLCKMLAWVDVELAY*RKPNSS
Trigger: TGATGAGTTTGGCTTCCTGCAATATGCCAACTCCAC...GTCTACCCAGGCCAGCATCTTGCACAGATGTCTTTTCATGGACACCCTTGACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR TCA 90 bp CAGTCAAGGGTGTCCATGAAAAGACATCTGTGCAAGATGCTGGCCTGGGTAGACCATTGGTTTTCTCAGTaGAGCTTGAATTCTGGCGAA +
Preference number: 4 (lower is better)
Translates to: QSRVSMKRHLCKMLAWVDHWFSQ*SLNSGE
Trigger: TTCGCCAGAATTCAAGCTTCACTGAGAAAACCAATG...GTCTACCCAGGCCAGCATCTTGCACAGATGTCTTTTCATGGACACCCTTGACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR TCA 90 bp CAGTCAAGGGTGTCCATGAAAAGACATCTGTGCAAGATGCTGGCCTGGGTAGACTCAGGTTCTCAATCTTaGCCATGTCATTGTCAGCAT +
Preference number: 4 (lower is better)
Translates to: QSRVSMKRHLCKMLAWVDSGSQS*PCHCQH
Trigger: ATGCTGACAATGACATGGTCAAGATTGAGAACCTGA...GTCTACCCAGGCCAGCATCTTGCACAGATGTCTTTTCATGGACACCCTTGACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS GCA 90 bp GGCACAGGCCTGGTCCTCCTCCATAACGCTGAGGCGCGGTGTGTGTaGCCATGGCCAGCTCCACTCCCAGGCTTCTGTCCGCCCACTGCC +
Preference number: 5 (lower is better)
Translates to: GTGLVLLHNAEARCV*PWPAPLPGFCPPTA
Trigger: GGCAGTGGGCGGACAGAAGCCTGGGAGTGGAGCTGGCCATGGGCACACACACCGCGCCTCAGCGTTATGGAGGAGGACCAGGCCTGTGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS TCA 90 bp CTGCAGGTCTGGCTGAGTGACTCTCCCAGGTGCCAGGGCCTGAGCTaGGGGCCTCCAGACGTTGGCGCAGAGCCTCGAGCTCTGAGCCCA +
Preference number: 5 (lower is better)
Translates to: LQVWLSDSPRCQGLS*GPPDVGAEPRALSP
Trigger: TGGGCTCAGAGCTCGAGGCTCTGCGCCAACGTCTGGAGGCCCTCAGCTCAGGCCCTGGCACCTGGGAGAGTCACTCAGCCAGACCTGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS CCA 90 bp ATGCCGCGGGTCTCCTCGAAGTGCCGGCTCTCCATGGCACAGGCCTaGTCCTCCTCCATAACGCTGAGGCGCGGTGTGTGTGCCCATGGC +
Preference number: 5 (lower is better)
Translates to: MPRVSSKCRLSMAQA*SSSITLRRGVCAHG
Trigger: GCCATGGGCACACACACCGCGCCTCAGCGTTATGGAGGAGGACCAGGCCTGTGCCATGGAGAGCCGGCACTTCGAGGAGACCCGCGGCAT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS GCA 90 bp TGTGTGCCCATGGCCAGCTCCACTCCCAGGCTTCTGTCCGCCCACTaGCCAGCCAATAGGACTTCTGTAGCGGGAAGTACCAGGGCCGGG +
Preference number: 5 (lower is better)
Translates to: CVPMASSTPRLLSAH*PANRTSVAGSTRAG
Trigger: CCCGGCCCTGGTACTTCCCGCTACAGAAGTCCTATTGGCTGGGCAGTGGGCGGACAGAAGCCTGGGAGTGGAGCTGGCCATGGGCACACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR CAA 90 bp GCCCAGCTTCTCCGTTCCTGTCATTCCACCAGGGCTGAGGCAGCCACATTCACGGAGGGCCTCCAGACGTaGGCGCAGAGCCTCGAGCTC +
Preference number: 5 (lower is better)
Translates to: AQLLRSCHSTRAEAATFTEGLQT*AQSLEL
Trigger: GAGCTCGAGGCTCTGCGCCAACGTCTGGAGGCCCTC...CGTGAATGTGGCTGCCTCAGCCCTGGTGGAATGACAGGAACGGAGAAGCTGGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR CAA 90 bp GGTAGTTGGGAGGAGGGCAGGAGCCCTTTGGTCCTGAACCTGCCTTTCCAGGGCGCCAGCACAGGCACCTaGAGGCAGCAGCAGGGCAAG +
Preference number: 5 (lower is better)
Translates to: GSWEEGRSPLVLNLPFQGASTGT*RQQQGK
Trigger: CTTGCCCTGCTGCTGCCTCAAGGTGCCTGTGCTGGC...GCCCTGGAAAGGCAGGTTCAGGACCAAAGGGCTCCTGCCCTCCTCCCAACTACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR CAA 90 bp AGCCTTTGGCACAATTCGGGGAGGATGGTAGTTGGGAGGAGGGCAGGAGCCCTTCACCAGCCCTCGAGTTaGCGGCTGCCCTGGCCCACC +
Preference number: 5 (lower is better)
Translates to: SLWHNSGRMVVGRRAGALHQPSS*RLPWPT
Trigger: GGTGGGCCAGGGCAGCCGCAAACTCGAGGGCTGGTG...AAGGGCTCCTGCCCTCCTCCCAACTACCATCCTCCCCGAATTGTGCCAAAGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR CAA 90 bp ACTAGGGGCCACGGCCACCGCCTGACATCTGCCCCACACAGCTGCATCCCTGATGGTCCCAGGGAGCCGTaGGCAGGAGACTTGAGCACA +
Preference number: 5 (lower is better)
Translates to: TRGHGHRLTSAPHSCIPDGPREP*AGDLST
Trigger: TGTGCTCAAGTCTCCTGCCAACGGCTCCCTGGGACC...ATCAGGGATGCAGCTGTGTGGGGCAGATGTCAGGCGGTGGCCGTGGCCCCTAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS GCA 90 bp GGTTGCAAGCCAGCCCAGAGCTGCACAAAGGCTGAGCACTGCCCTTaGAGAGTGTCAGGAGAGGCTGGGCTGACAGGTGACTGGGTGCCC +
Preference number: 5 (lower is better)
Translates to: GCKPAQSCTKAEHCP*RVSGEAGLTGDWVP
Trigger: GGGCACCCAGTCACCTGTCAGCCCAGCCTCTCCTGACACTCTGCAAGGGCAGTGCTCAGCCTTTGTGCAGCTCTGGGCTGGCTTGCAACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS GCA 90 bp TTCCGACGAGCACAGTGGAAGCGCTTCACCAGGAGCCCATGGAACTaGCGCATCTTCAGCCACCAGCCCTCGAGTTTGCGGCTGCCCTGG +
Preference number: 5 (lower is better)
Translates to: FRRAQWKRFTRSPWN*RIFSHQPSSLRLPW
Trigger: CCAGGGCAGCCGCAAACTCGAGGGCTGGTGGCTGAAGATGCGGCAGTTCCATGGGCTCCTGGTGAAGCGCTTCCACTGTGCTCGTCGGAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS GCA 90 bp CAAGTGGCACCCACACCAGAGGGCAGCCGGAATGTGCTCACCAGCTaGTGGGGGCTGGCATCAGGTGACAGCCGTAATCGGTACTCCTGG +
Preference number: 5 (lower is better)
Translates to: QVAPTPEGSRNVLTS*WGLASGDSRNRYSW
Trigger: CCAGGAGTACCGATTACGGCTGTCACCTGATGCCAGCCCCCAGCAGCTGGTGAGCACATTCCGGCTGCCCTCTGGTGTGGGTGCCACTTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS CCA 90 bp GCAGGCTCTGTGGGGACGGTGCCTGTGGCTGGGGATCTGAGCCGTTaGGGACATCGAAGCCCAGCTGCTGAGCAATCTTGGCTGTGTCCA +
Preference number: 5 (lower is better)
Translates to: AGSVGTVPVAGDLSR*GHRSPAAEQSWLCP
Trigger: TGGACACAGCCAAGATTGCTCAGCAGCTGGGCTTCGATGTCCCCAACGGCTCAGATCCCCAGCCACAGGCACCGTCCCCACAGAGCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR CAA 90 bp CCCAAGGCTTTAAGGCAAAGCAGGGTGAGGGTATGTGCAGCCCAGGGCCAGGCCTGGGGATCTGAGCCGTaGGGGACATCGAAGCCCAGC +
Preference number: 5 (lower is better)
Translates to: PKALRQSRVRVCAAQGQAWGSEP*GTSKPS
Trigger: GCTGGGCTTCGATGTCCCCAACGGCTCAGATCCCCA...GGCCTGGCCCTGGGCTGCACATACCCTCACCCTGCTTTGCCTTAAAGCCTTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR CAA 90 bp GCCCAGGGCCAGGCCAGCCTTTGGCACAATTCGGGGAGGATGGTAGTTGGGAGGACCCAGTGCACGGCGTaGTTCAGGCCCATCGTCTTC +
Preference number: 5 (lower is better)
Translates to: AQGQASLWHNSGRMVVGRTQCTA*FRPIVF
Trigger: GAAGACGATGGGCCTGAACAACGCCGTGCACTGGGT...CCTCCCAACTACCATCCTCCCCGAATTGTGCCAAAGGCTGGCCTGGCCCTGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR CAA 90 bp ACTAGGGGCCACGGCCACCGCCTGACATCTGCCCCACACAGCTGCATCCCTGATAGCACCTGGCCGTACTaGAGGATGGCGGTCAGAGCT +
Preference number: 5 (lower is better)
Translates to: TRGHGHRLTSAPHSCIPDSTWPY*RMAVRA
Trigger: AGCTCTGACCGCCATCCTCAAGTACGGCCAGGTGCT...ATCAGGGATGCAGCTGTGTGGGGCAGATGTCAGGCGGTGGCCGTGGCCCCTAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR CAA 90 bp TGTGTGACTAGGGGCCACGGCCACCGCCTGACATCTGCCCCACACAGCTGCATCCGGTCAAAGAGCACGTaGTGCTGTGGGCACATGCCC +
Preference number: 5 (lower is better)
Translates to: CVTRGHGHRLTSAPHSCIRSKST*CCGHMP
Trigger: GGGCATGTGCCCACAGCACAACGTGCTCTTTGACCG...GATGCAGCTGTGTGGGGCAGATGTCAGGCGGTGGCCGTGGCCCCTAGTCACACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR CAA 90 bp CAAGCCCAGCTTCTCCGTTCCTGTCATTCCACCAGGGCTGAGGCAGCCACATTCTCGAAGGCCCCCTTCTaGACGGCCTCGCTGGGCAGG +
Preference number: 5 (lower is better)
Translates to: QAQLLRSCHSTRAEAATFSKAPF*TASLGR
Trigger: CCTGCCCAGCGAGGCCGTCAAGAAGGGGGCCTTCGA...GAATGTGGCTGCCTCAGCCCTGGTGGAATGACAGGAACGGAGAAGCTGGGCTTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR CAA 90 bp TGTGTGACTAGGGGCCACGGCCACCGCCTGACATCTGCCCCACACAGCTGCATCCCGTTGGCAGGAGACTaGAGCACACAAGTGGCACCC +
Preference number: 5 (lower is better)
Translates to: CVTRGHGHRLTSAPHSCIPLAGD*STQVAP
Trigger: GGGTGCCACTTGTGTGCTCAAGTCTCCTGCCAACGG...GATGCAGCTGTGTGGGGCAGATGTCAGGCGGTGGCCGTGGCCCCTAGTCACACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS TCA 90 bp TGCTCGTGTCTGAGACCAGCAGGGAGGAAGCCACATGCTTGCGGATaGACTGGGACACTTGCGGCTCCGAGCAGCTGCTCAGCCGAGGAC +
Preference number: 5 (lower is better)
Translates to: CSCLRPAGRKPHACG*TGTLAAPSSCSAED
Trigger: GTCCTCGGCTGAGCAGCTGCTCGGAGCCGCAAGTGTCCCAGTTCATCCGCAAGCATGTGGCTTCCTCCCTGCTGGTCTCAGACACGAGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS TCA 90 bp GACGGCCTCGCTGGGCAGGATGTAGGAGAGCTCGGTGCTCGTGTCTaGGACCAGCAGGGAGGAAGCCACATGCTTGCGGATGAACTGGGA +
Preference number: 5 (lower is better)
Translates to: DGLAGQDVGELGARV*DQQGGSHMLADELG
Trigger: TCCCAGTTCATCCGCAAGCATGTGGCTTCCTCCCTGCTGGTCTCAGACACGAGCACCGAGCTCTCCTACATCCTGCCCAGCGAGGCCGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS TCA 90 bp GGCTGTGTTCCAGTTGCTGAAAGAGGCGCTCGAAGGCCCCCTTCTTaGCGGCCTCGCTGGGCAGGATGTAGGAGAGCTCGGTGCTCGTGT +
Preference number: 5 (lower is better)
Translates to: GCVPVAERGARRPPS*RPRWAGCRRARCSC
Trigger: ACACGAGCACCGAGCTCTCCTACATCCTGCCCAGCGAGGCCGTCAAGAAGGGGGCCTTCGAGCGCCTCTTTCAGCAACTGGAACACAGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS GCA 90 bp TGCAGGAAGCCAAACTCATCACGCTGGCCATCAGGGCAAAGCGACTaGATGACGGGCAGGATGCCGGCTGATGTCAGCGGTGCTGCGGTG +
Preference number: 5 (lower is better)
Translates to: CRKPNSSRWPSGQSD*MTGRMPADVSGAAV
Trigger: CACCGCAGCACCGCTGACATCAGCCGGCATCCTGCCCGTCATGCAGTCGCTTTGCCCTGATGGCCAGCGTGATGAGTTTGGCTTCCTGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS GCA 90 bp GCAGCTAGGAGGGCTTGGGCCGTGCTGTTGGGCAGTGACAGGTTCTaGATCAGGAAACGCCAAAGCTCTCTCTGGTCCCTGGCCACCGAG +
Preference number: 5 (lower is better)
Translates to: AARRAWAVLLGSDRF*IRKRQSSLWSLATE
Trigger: CTCGGTGGCCAGGGACCAGAGAGAGCTTTGGCGTTTCCTGATGCAGAACCTGTCACTGCCCAACAGCACGGCCCAAGCCCTCCTAGCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS GCA 90 bp GAGAGCTCGGTGCTCGTGTCTGAGACCAGCAGGGAGGAAGCCACATaGTTGCGGATGAACTGGGACACTTGCGGCTCCGAGCAGCTGCTC +
Preference number: 5 (lower is better)
Translates to: ESSVLVSETSREEAT*LRMNWDTCGSEQLL
Trigger: GAGCAGCTGCTCGGAGCCGCAAGTGTCCCAGTTCATCCGCAAGCATGTGGCTTCCTCCCTGCTGGTCTCAGACACGAGCACCGAGCTCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR CAA 90 bp GCCCAGCTTCTCCGTTCCTGTCATTCCACCAGGGCTGAGGCAGCCACATTCACGGCTTGGGCCGTGCTGTaGGGCAGTGACAGGTTCTGC +
Preference number: 5 (lower is better)
Translates to: AQLLRSCHSTRAEAATFTAWAVL*GSDRFC
Trigger: GCAGAACCTGTCACTGCCCAACAGCACGGCCCAAGC...CGTGAATGTGGCTGCCTCAGCCCTGGTGGAATGACAGGAACGGAGAAGCTGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR CAA 90 bp CCAGGACCCAAGGCTTTAAGGCAAAGCAGGGTGAGGGTATGTGCAGCCCAGGGCATTCAGGCTGCTGGCTaGAGGTGCAGAGGCCTGGCC +
Preference number: 5 (lower is better)
Translates to: PGPKALRQSRVRVCAAQGIQAAG*RCRGLA
Trigger: GGCCAGGCCTCTGCACCTCAAGCCAGCAGCCTGAAT...GCCCTGGGCTGCACATACCCTCACCCTGCTTTGCCTTAAAGCCTTGGGTCCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR CAA 90 bp CCAGGACCCAAGGCTTTAAGGCAAAGCAGGGTGAGGGTATGTGCAGCCCAGGGCGTCTTGCCGGCCCCGTaGTGGCCTAGGAAAGAGACC +
Preference number: 5 (lower is better)
Translates to: PGPKALRQSRVRVCAAQGVLPAP*WPRKET
Trigger: GGTCTCTTTCCTAGGCCACAACGGGGCCGGCAAGAC...GCCCTGGGCTGCACATACCCTCACCCTGCTTTGCCTTAAAGCCTTGGGTCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR CAA 90 bp GCCCAGCTTCTCCGTTCCTGTCATTCCACCAGGGCTGAGGCAGCCACATTCACGGGAGGTGGCACGAAGTaGGACAGTGGCAGCCCCTGT +
Preference number: 5 (lower is better)
Translates to: AQLLRSCHSTRAEAATFTGGGTK*DSGSPC
Trigger: ACAGGGGCTGCCACTGTCCAACTTCGTGCCACCTCC...CGTGAATGTGGCTGCCTCAGCCCTGGTGGAATGACAGGAACGGAGAAGCTGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS TCA 90 bp GGAAGCCAAACTCATCACGCTGGCCATCAGGGCAAAGCGACTGCATaGCGGGCAGGATGCCGGCTGATGTCAGCGGTGCTGCGGTGTAGA +
Preference number: 5 (lower is better)
Translates to: GSQTHHAGHQGKATA*RAGCRLMSAVLRCR
Trigger: TCTACACCGCAGCACCGCTGACATCAGCCGGCATCCTGCCCGTCATGCAGTCGCTTTGCCCTGATGGCCAGCGTGATGAGTTTGGCTTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS GCA 90 bp AGACCTCGGAAGGGTCCACACGGGCAGCTAGGAGGGCTTGGGCCGTaGTGTTGGGCAGTGACAGGTTCTGCATCAGGAAACGCCAAAGCT +
Preference number: 5 (lower is better)
Translates to: RPRKGPHGQLGGLGP*CWAVTGSASGNAKA
Trigger: AGCTTTGGCGTTTCCTGATGCAGAACCTGTCACTGCCCAACAGCACGGCCCAAGCCCTCCTAGCTGCCCGTGTGGACCCTTCCGAGGTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS GCA 90 bp CTGAATTTGCACCTATCCCGGTGCTGTTGGCCAGGCCATTCAGGCTaGTGGCTTGAGGTGCAGAGGCCTGGCCAGCACAGGCACCTTGAG +
Preference number: 5 (lower is better)
Translates to: LNLHLSRCCWPGHSG*WLEVQRPGQHRHLE
Trigger: CTCAAGGTGCCTGTGCTGGCCAGGCCTCTGCACCTCAAGCCAGCAGCCTGAATGGCCTGGCCAACAGCACCGGGATAGGTGCAAATTCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS GCA 90 bp CCCAAAGCACTCTCCAGGGCGCACACCCAGGCAAAGGCGGTCCACTaGCAGGATCCGGCCAATCTTCCGAGACTTGTACACCTTGGTCAG +
Preference number: 5 (lower is better)
Translates to: PKALSRAHTQAKAVH*QDPANLPRLVHLGQ
Trigger: CTGACCAAGGTGTACAAGTCTCGGAAGATTGGCCGGATCCTGGCAGTGGACCGCCTTTGCCTGGGTGTGCGCCCTGGAGAGTGCTTTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS CCA 90 bp CGGAAGGGTCCACACGGGCAGCTAGGAGGGCTTGGGCCGTGCTGTTaGGCAGTGACAGGTTCTGCATCAGGAAACGCCAAAGCTCTCTCT +
Preference number: 5 (lower is better)
Translates to: RKGPHGQLGGLGPCC*AVTGSASGNAKALS
Trigger: AGAGAGAGCTTTGGCGTTTCCTGATGCAGAACCTGTCACTGCCCAACAGCACGGCCCAAGCCCTCCTAGCTGCCCGTGTGGACCCTTCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS CCA 90 bp AATTTGCACCTATCCCGGTGCTGTTGGCCAGGCCATTCAGGCTGCTaGCTTGAGGTGCAGAGGCCTGGCCAGCACAGGCACCTTGAGGCA +
Preference number: 5 (lower is better)
Translates to: NLHLSRCCWPGHSGC*LEVQRPGQHRHLEA
Trigger: TGCCTCAAGGTGCCTGTGCTGGCCAGGCCTCTGCACCTCAAGCCAGCAGCCTGAATGGCCTGGCCAACAGCACCGGGATAGGTGCAAATT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS CCA 90 bp GAGGTGCTCCTCCACCGTGAGCCGGTCAAAGAGCACGTTGTGCTGTaGGCACATGCCCAGGTTCTTGCGGATCTCATCCATCTCGGTGCG +
Preference number: 5 (lower is better)
Translates to: EVLLHREPVKEHVVL*AHAQVLADLIHLGA
Trigger: CGCACCGAGATGGATGAGATCCGCAAGAACCTGGGCATGTGCCCACAGCACAACGTGCTCTTTGACCGGCTCACGGTGGAGGAGCACCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS CCA 90 bp GTGTCTGAGACCAGCAGGGAGGAAGCCACATGCTTGCGGATGAACTaGGACACTTGCGGCTCCGAGCAGCTGCTCAGCCGAGGACAACCT +
Preference number: 5 (lower is better)
Translates to: VSETSREEATCLRMN*DTCGSEQLLSRGQP
Trigger: AGGTTGTCCTCGGCTGAGCAGCTGCTCGGAGCCGCAAGTGTCCCAGTTCATCCGCAAGCATGTGGCTTCCTCCCTGCTGGTCTCAGACAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS CCA 90 bp TTGGAGTTCCGACGAGCACAGTGGAAGCGCTTCACCAGGAGCCCATaGAACTGCCGCATCTTCAGCCACCAGCCCTCGAGTTTGCGGCTG +
Preference number: 5 (lower is better)
Translates to: LEFRRAQWKRFTRSP*NCRIFSHQPSSLRL
Trigger: CAGCCGCAAACTCGAGGGCTGGTGGCTGAAGATGCGGCAGTTCCATGGGCTCCTGGTGAAGCGCTTCCACTGTGCTCGTCGGAACTCCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR CAA 90 bp TGTGTGACTAGGGGCCACGGCCACCGCCTGACATCTGCCCCACACAGCTGCATCTCGATGGTGCGGTTGTaGCCACACAAGATGGGTTGC +
Preference number: 5 (lower is better)
Translates to: CVTRGHGHRLTSAPHSCISMVRL*PHKMGC
Trigger: GCAACCCATCTTGTGTGGCAACAACCGCACCATCGA...GATGCAGCTGTGTGGGGCAGATGTCAGGCGGTGGCCGTGGCCCCTAGTCACACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR CAA 90 bp GCCAGCAAGCCCAGCTTCTCCGTTCCTGTCATTCCACCAGGGCTGAGGCAGCCACTGCTGCAGCCTGCCTaGCTCCAAGAAGCTTCGGAT +
Preference number: 5 (lower is better)
Translates to: ASKPSFSVPVIPPGLRQPLLQPA*LQEASD
Trigger: ATCCGAAGCTTCTTGGAGCAAGGCAGGCTGCAGCAG...TGGCTGCCTCAGCCCTGGTGGAATGACAGGAACGGAGAAGCTGGGCTTGCTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR CAA 90 bp TGTGTGACTAGGGGCCACGGCCACCGCCTGACATCTGCCCCACACAGCTGCATCATGGCTACCGAAAGCTaGCGCTTCATGCCTCCAGAC +
Preference number: 5 (lower is better)
Translates to: CVTRGHGHRLTSAPHSCIMATES*RFMPPD
Trigger: GTCTGGAGGCATGAAGCGCAAGCTTTCGGTAGCCAT...GATGCAGCTGTGTGGGGCAGATGTCAGGCGGTGGCCGTGGCCCCTAGTCACACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR CAA 90 bp ACCCAAGGCTTTAAGGCAAAGCAGGGTGAGGGTATGTGCAGCCCAGGGCCAGGCGATGAACTGGGACACTaGCGGCTCCGAGCAGCTGCT +
Preference number: 5 (lower is better)
Translates to: TQGFKAKQGEGMCSPGPGDELGH*RLRAAA
Trigger: AGCAGCTGCTCGGAGCCGCAAGTGTCCCAGTTCATC...GCCTGGCCCTGGGCTGCACATACCCTCACCCTGCTTTGCCTTAAAGCCTTGGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR CAA 90 bp CCCAAGGCTTTAAGGCAAAGCAGGGTGAGGGTATGTGCAGCCCAGGGCCAGGCCACCTGGAGCAGGTCCTaGAGCACGCTGTGTCCATTG +
Preference number: 5 (lower is better)
Translates to: PKALRQSRVRVCAAQGQATWSRS*STLCPL
Trigger: CAATGGACACAGCGTGCTCAAGGACCTGCTCCAGGT...GGCCTGGCCCTGGGCTGCACATACCCTCACCCTGCTTTGCCTTAAAGCCTTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR CAA 90 bp TGTGTGACTAGGGGCCACGGCCACCGCCTGACATCTGCCCCACACAGCTGCATCTCTGGGAAGTTCCTGTaGAAGAACCGCACCACGTCC +
Preference number: 5 (lower is better)
Translates to: CVTRGHGHRLTSAPHSCISGKFL*KNRTTS
Trigger: GGACGTGGTGCGGTTCTTCAACAGGAACTTCCCAGA...GATGCAGCTGTGTGGGGCAGATGTCAGGCGGTGGCCGTGGCCCCTAGTCACACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS TCA 90 bp TGCTTAAGTTCAGCATGGGTCCCAGGGAGCCGTTGGCAGGAGACTTaGGCACACAAGTGGCACCCACACCAGAGGGCAGCCGGAATGTGC +
Preference number: 5 (lower is better)
Translates to: CLSSAWVPGSRWQET*AHKWHPHQRAAGMC
Trigger: GCACATTCCGGCTGCCCTCTGGTGTGGGTGCCACTTGTGTGCTCAAGTCTCCTGCCAACGGCTCCCTGGGACCCATGCTGAACTTAAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS GCA 90 bp AGCGCTTCAGGCTCGATGGTGCGGTTGTTGCCACACAAGATGGGTTaGAAGCCAGCCCAGAGCTGCACAAAGGCTGAGCACTGCCCTTGC +
Preference number: 5 (lower is better)
Translates to: SASGSMVRLLPHKMG*KPAQSCTKAEHCPC
Trigger: GCAAGGGCAGTGCTCAGCCTTTGTGCAGCTCTGGGCTGGCTTGCAACCCATCTTGTGTGGCAACAACCGCACCATCGAGCCTGAAGCGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS GCA 90 bp CCGTACTTGAGGATGGCGGTCAGAGCTGTCACGGAGATAGACAGCTaGACAAAGCCCGTGATGAACCAGGCCACCCAGTGCACGGCGTTG +
Preference number: 5 (lower is better)
Translates to: PYLRMAVRAVTEIDS*TKPVMNQATQCTAL
Trigger: CAACGCCGTGCACTGGGTGGCCTGGTTCATCACGGGCTTTGTGCAGCTGTCTATCTCCGTGACAGCTCTGACCGCCATCCTCAAGTACGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS GCA 90 bp ACATACTGTCGAAGAACCGTGCCGCCAGCAGGCGGGACTCTCCACTaGTTAAGTTCAGCATGGGTCCCAGGGAGCCGTTGGCAGGAGACT +
Preference number: 5 (lower is better)
Translates to: TYCRRTVPPAGGTLH*LSSAWVPGSRWQET
Trigger: AGTCTCCTGCCAACGGCTCCCTGGGACCCATGCTGAACTTAAGCAGTGGAGAGTCCCGCCTGCTGGCGGCACGGTTCTTCGACAGTATGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS CCA 90 bp TCCGAAGCGCTTCAGGCTCGATGGTGCGGTTGTTGCCACACAAGATaGGTTGCAAGCCAGCCCAGAGCTGCACAAAGGCTGAGCACTGCC +
Preference number: 5 (lower is better)
Translates to: SEALQARWCGCCHTR*VASQPRAAQRLSTA
Trigger: GGCAGTGCTCAGCCTTTGTGCAGCTCTGGGCTGGCTTGCAACCCATCTTGTGTGGCAACAACCGCACCATCGAGCCTGAAGCGCTTCGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS CCA 90 bp TGGCCAGTGATGTCAGTCAGGATGTCACCTGTGACCACTCTCATCTaGGGTGGGTGTCCACCCACACTGCTGGGGCATGAGAACCCCGTG +
Preference number: 5 (lower is better)
Translates to: WPVMSVRMSPVTTLI*GGCPPTLLGHENPV
Trigger: CACGGGGTTCTCATGCCCCAGCAGTGTGGGTGGACACCCACCCCAGATGAGAGTGGTCACAGGTGACATCCTGACTGACATCACTGGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR CAA 90 bp CCAGGACCCAAGGCTTTAAGGCAAAGCAGGGTGAGGGTATGTGCAGCCCAGGGCATTTGGAGCAGAGGATaGCTACCCAGGCGGCTCCAG +
Preference number: 5 (lower is better)
Translates to: PGPKALRQSRVRVCAAQGIWSRG*LPRRLQ
Trigger: CTGGAGCCGCCTGGGTAGCAATCCTCTGCTCCAAAT...GCCCTGGGCTGCACATACCCTCACCCTGCTTTGCCTTAAAGCCTTGGGTCCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR CAA 90 bp GGTAGTTGGGAGGAGGGCAGGAGCCCTTTGGTCCTGAACCTGCCTTTCCAGGGCCAGCAGCTCCTCCATTaGGAGCAGAGGATTGCTACC +
Preference number: 5 (lower is better)
Translates to: GSWEEGRSPLVLNLPFQGQQLLH*EQRIAT
Trigger: GGTAGCAATCCTCTGCTCCAAATGGAGGAGCTGCTG...GCCCTGGAAAGGCAGGTTCAGGACCAAAGGGCTCCTGCCCTCCTCCCAACTACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR CAA 90 bp CCCAAGGCTTTAAGGCAAAGCAGGGTGAGGGTATGTGCAGCCCAGGGCCAGGCCCACATGCCCAGGTTCTaGCGGATCTCATCCATCTCG +
Preference number: 5 (lower is better)
Translates to: PKALRQSRVRVCAAQGQAHMPRF*RISSIS
Trigger: CGAGATGGATGAGATCCGCAAGAACCTGGGCATGTG...GGCCTGGCCCTGGGCTGCACATACCCTCACCCTGCTTTGCCTTAAAGCCTTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR CAA 90 bp GGTAGTTGGGAGGAGGGCAGGAGCCCTTTGGTCCTGAACCTGCCTTTCCAGGGCATCTTGTCCGTCTCTTaGCGGATCTCCTCCTGTGCC +
Preference number: 5 (lower is better)
Translates to: GSWEEGRSPLVLNLPFQGILSVS*RISSCA
Trigger: GGCACAGGAGGAGATCCGCAAAGAGACGGACAAGAT...GCCCTGGAAAGGCAGGTTCAGGACCAAAGGGCTCCTGCCCTCCTCCCAACTACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR CAA 90 bp GGTAGTTGGGAGGAGGGCAGGAGCCCTTTGGTCCTGAACCTGCCTTTCCAGGGCACCAGTGAGTGCCGCTaGTTAGAGAGTTCCAGGTCC +
Preference number: 5 (lower is better)
Translates to: GSWEEGRSPLVLNLPFQGTSECR*LESSRS
Trigger: GGACCTGGAACTCTCTAACAAGCGGCACTCACTGGT...GCCCTGGAAAGGCAGGTTCAGGACCAAAGGGCTCCTGCCCTCCTCCCAACTACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR CAA 90 bp GGTAGTTGGGAGGAGGGCAGGAGCCCTTTGGTCCTGAACCTGCCTTTCCAGGGCGAGGAAGCCACATGCTaGCGGATGAACTGGGACACT +
Preference number: 5 (lower is better)
Translates to: GSWEEGRSPLVLNLPFQGEEATC*RMNWDT
Trigger: AGTGTCCCAGTTCATCCGCAAGCATGTGGCTTCCTC...GCCCTGGAAAGGCAGGTTCAGGACCAAAGGGCTCCTGCCCTCCTCCCAACTACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR CAA 90 bp TGTGTGACTAGGGGCCACGGCCACCGCCTGACATCTGCCCCACACAGCTGCATCGGATTGCCCTTGCTTTaGGGTAGGTTTGCACGCAGA +
Preference number: 5 (lower is better)
Translates to: CVTRGHGHRLTSAPHSCIGLPLL*GRFARR
Trigger: TCTGCGTGCAAACCTACCCAAAAGCAAGGGCAATCC...GATGCAGCTGTGTGGGGCAGATGTCAGGCGGTGGCCGTGGCCCCTAGTCACACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR CAA 90 bp GCCCAGCTTCTCCGTTCCTGTCATTCCACCAGGGCTGAGGCAGCCACATTCACGAGCACGCTGTGTCCATaGACAAAGGCCTCTCCCCCA +
Preference number: 5 (lower is better)
Translates to: AQLLRSCHSTRAEAATFTSTLCP*TKASPP
Trigger: TGGGGGAGAGGCCTTTGTCAATGGACACAGCGTGCT...CGTGAATGTGGCTGCCTCAGCCCTGGTGGAATGACAGGAACGGAGAAGCTGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR CAA 90 bp GGTAGTTGGGAGGAGGGCAGGAGCCCTTTGGTCCTGAACCTGCCTTTCCAGGGCACCGAACGTCCCGTCTaGATGAGGTCCAGAATGAGG +
Preference number: 5 (lower is better)
Translates to: GSWEEGRSPLVLNLPFQGTERPV*MRSRMR
Trigger: CCTCATTCTGGACCTCATCAAGACGGGACGTTCGGT...GCCCTGGAAAGGCAGGTTCAGGACCAAAGGGCTCCTGCCCTCCTCCCAACTACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS TCA 90 bp CTGGCCATCAGGGCAAAGCGACTGCATGACGGGCAGGATGCCGGCTaGTGTCAGCGGTGCTGCGGTGTAGAAAGCTTCCTTCACAGAGAT +
Preference number: 5 (lower is better)
Translates to: LAIRAKRLHDGQDAG*CQRCCGVESFLHRD
Trigger: ATCTCTGTGAAGGAAGCTTTCTACACCGCAGCACCGCTGACATCAGCCGGCATCCTGCCCGTCATGCAGTCGCTTTGCCCTGATGGCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS GCA 90 bp CGGTGGAGGCGTTCCAGAAGCTGGGTGACCGTGGAGTTGGCATATTaGAGGAAGCCAAACTCATCACGCTGGCCATCAGGGCAAAGCGAC +
Preference number: 5 (lower is better)
Translates to: RWRRSRSWVTVELAY*RKPNSSRWPSGQSD
Trigger: GTCGCTTTGCCCTGATGGCCAGCGTGATGAGTTTGGCTTCCTGCAATATGCCAACTCCACGGTCACCCAGCTTCTGGAACGCCTCCACCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS GCA 90 bp GTGGTAGCCCTTGTTATTGTAGAGCACCTGAGCCACCCTCCGCACTaGAATCTTCCGCACCATAGGAGGGACCCGGGCACCAAAGGATGC +
Preference number: 5 (lower is better)
Translates to: VVALVIVEHLSHPPH*NLPHHRRDPGTKGC
Trigger: GCATCCTTTGGTGCCCGGGTCCCTCCTATGGTGCGGAAGATTGCAGTGCGGAGGGTGGCTCAGGTGCTCTACAATAACAAGGGCTACCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS GCA 90 bp TGTGCCTCATCCTTCCAGGGGATGCCACGCAGCCGCGTGTACAGCTaGAGGTGTTCACGAGCCGTGAGCTCATCAAACAGGGCATCAAAC +
Preference number: 5 (lower is better)
Translates to: CASSFQGMPRSRVYS*RCSRAVSSSNRASN
Trigger: GTTTGATGCCCTGTTTGATGAGCTCACGGCTCGTGAACACCTGCAGCTGTACACGCGGCTGCGTGGCATCCCCTGGAAGGATGAGGCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS CCA 90 bp GTGACCGTGGAGTTGGCATATTGCAGGAAGCCAAACTCATCACGCTaGCCATCAGGGCAAAGCGACTGCATGACGGGCAGGATGCCGGCT +
Preference number: 5 (lower is better)
Translates to: VTVELAYCRKPNSSR*PSGQSDCMTGRMPA
Trigger: AGCCGGCATCCTGCCCGTCATGCAGTCGCTTTGCCCTGATGGCCAGCGTGATGAGTTTGGCTTCCTGCAATATGCCAACTCCACGGTCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR CAA 90 bp AGCCTTTGGCACAATTCGGGGAGGATGGTAGTTGGGAGGAGGGCAGGAGCCCTTGGCTCGATGGTGCGGTaGTTGCCACACAAGATGGGT +
Preference number: 5 (lower is better)
Translates to: SLWHNSGRMVVGRRAGALGSMVR*LPHKMG
Trigger: ACCCATCTTGTGTGGCAACAACCGCACCATCGAGCC...AAGGGCTCCTGCCCTCCTCCCAACTACCATCCTCCCCGAATTGTGCCAAAGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR CAA 90 bp CCAGGACCCAAGGCTTTAAGGCAAAGCAGGGTGAGGGTATGTGCAGCCCAGGGCAGGCTAGCACTGGTCTaGTTCATGGGGTGGTTGGTG +
Preference number: 5 (lower is better)
Translates to: PGPKALRQSRVRVCAAQGRLALV*FMGWLV
Trigger: CACCAACCACCCCATGAACAAGACCAGTGCTAGCCT...GCCCTGGGCTGCACATACCCTCACCCTGCTTTGCCTTAAAGCCTTGGGTCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR CAA 90 bp GCCCAGGGCCAGGCCAGCCTTTGGCACAATTCGGGGAGGATGGTAGTTGGGAGGACGAACTGCAGGTGTTaGGCCTTGGTGGATTTCTCT +
Preference number: 5 (lower is better)
Translates to: AQGQASLWHNSGRMVVGRTNCRC*ALVDFS
Trigger: AGAGAAATCCACCAAGGCCAAACACCTGCAGTTCGT...CCTCCCAACTACCATCCTCCCCGAATTGTGCCAAAGGCTGGCCTGGCCCTGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR CAA 90 bp CCAGGACCCAAGGCTTTAAGGCAAAGCAGGGTGAGGGTATGTGCAGCCCAGGGCGTCTTCCCTGCACCATaGACACCAAGGAGCCCAAAG +
Preference number: 5 (lower is better)
Translates to: PGPKALRQSRVRVCAAQGVFPAP*TPRSPK
Trigger: CTTTGGGCTCCTTGGTGTCAATGGTGCAGGGAAGAC...GCCCTGGGCTGCACATACCCTCACCCTGCTTTGCCTTAAAGCCTTGGGTCCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR CAA 90 bp ACCCAAGGCTTTAAGGCAAAGCAGGGTGAGGGTATGTGCAGCCCAGGGCCAGGCCGAGGGCTCAGCCTCTaGCTGCTCCACATTATCACT +
Preference number: 5 (lower is better)
Translates to: TQGFKAKQGEGMCSPGPGRGLSL*LLHIIT
Trigger: AGTGATAATGTGGAGCAGCAAGAGGCTGAGCCCTCG...GCCTGGCCCTGGGCTGCACATACCCTCACCCTGCTTTGCCTTAAAGCCTTGGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS TCA 90 bp GATCTCATCCATCTCGGTGCGGATGTCGTGCCCATAGATAGTGGCTaGGCCCGACGTGGGTGGGAACAGTCCAGTCAGGATCGACATGGT +
Preference number: 5 (lower is better)
Translates to: DLIHLGADVVPIDSG*ARRGWEQSSQDRHG
Trigger: ACCATGTCGATCCTGACTGGACTGTTCCCACCCACGTCGGGCTCAGCCACTATCTATGGGCACGACATCCGCACCGAGATGGATGAGATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS TCA 90 bp GTCCGTCTCTTTGCGGATCTCCTCCTGTGCCATGCTTTTGAGGCGTaGGTAGAACCAGAGGTGCTCCTCCACCGTGAGCCGGTCAAAGAG +
Preference number: 5 (lower is better)
Translates to: VRLFADLLLCHAFEA*VEPEVLLHREPVKE
Trigger: CTCTTTGACCGGCTCACGGTGGAGGAGCACCTCTGGTTCTACTCACGCCTCAAAAGCATGGCACAGGAGGAGATCCGCAAAGAGACGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS GCA 90 bp TCATGTTGCCTCTCCGAAGCGCTTCAGGCTCGATGGTGCGGTTGTTaGCACACAAGATGGGTTGCAAGCCAGCCCAGAGCTGCACAAAGG +
Preference number: 5 (lower is better)
Translates to: SCCLSEALQARWCGC*HTRWVASQPRAAQR
Trigger: CCTTTGTGCAGCTCTGGGCTGGCTTGCAACCCATCTTGTGTGGCAACAACCGCACCATCGAGCCTGAAGCGCTTCGGAGAGGCAACATGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS GCA 90 bp GAGATAGACAGCTGCACAAAGCCCGTGATGAACCAGGCCACCCAGTaGACGGCGTTGTTCAGGCCCATCGTCTTCATCACCTCCTTGAGC +
Preference number: 5 (lower is better)
Translates to: EIDSCTKPVMNQATQ*TALFRPIVFITSLS
Trigger: GCTCAAGGAGGTGATGAAGACGATGGGCCTGAACAACGCCGTGCACTGGGTGGCCTGGTTCATCACGGGCTTTGTGCAGCTGTCTATCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS CCA 90 bp ATGACCCTCAGGCATGGTAAGAATCCGGCCCAGTTCCCCAGAACCTaGAGCACATGTGAGCTGTTCCAAAAGGGCAGGAGCCAGCAGCAG +
Preference number: 5 (lower is better)
Translates to: MTLRHGKNPAQFPRT*STCELFQKGRSQQQ
Trigger: CTGCTGCTGGCTCCTGCCCTTTTGGAACAGCTCACATGTGCTCCAGGTTCTGGGGAACTGGGCCGGATTCTTACCATGCCTGAGGGTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR CAA 90 bp CAAGCCCAGCTTCTCCGTTCCTGTCATTCCACCAGGGCTGAGGCAGCCACATTCTGGGTGACCGTGGAGTaGGCATATTGCAGGAAGCCA +
Preference number: 5 (lower is better)
Translates to: QAQLLRSCHSTRAEAATFWVTVE*AYCRKP
Trigger: TGGCTTCCTGCAATATGCCAACTCCACGGTCACCCA...GAATGTGGCTGCCTCAGCCCTGGTGGAATGACAGGAACGGAGAAGCTGGGCTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR CAA 90 bp GGTAGTTGGGAGGAGGGCAGGAGCCCTTTGGTCCTGAACCTGCCTTTCCAGGGCTACAGGATTTTGGGGTaGCTGGTCATGAGGTGCACT +
Preference number: 5 (lower is better)
Translates to: GSWEEGRSPLVLNLPFQGYRILG*LVMRCT
Trigger: AGTGCACCTCATGACCAGCAACCCCAAAATCCTGTA...GCCCTGGAAAGGCAGGTTCAGGACCAAAGGGCTCCTGCCCTCCTCCCAACTACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR CAA 90 bp CCCAAGGCTTTAAGGCAAAGCAGGGTGAGGGTATGTGCAGCCCAGGGCCAGGCCGTCTTCATCACCTCCTaGAGCCTGTGCTCTTTCTCT +
Preference number: 5 (lower is better)
Translates to: PKALRQSRVRVCAAQGQAVFITS*SLCSFS
Trigger: AGAGAAAGAGCACAGGCTCAAGGAGGTGATGAAGAC...GGCCTGGCCCTGGGCTGCACATACCCTCACCCTGCTTTGCCTTAAAGCCTTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR CAA 90 bp GGTAGTTGGGAGGAGGGCAGGAGCCCTTTGGTCCTGAACCTGCCTTTCCAGGGCTACAGTGCAAAGTACTaGGAACCCAGGCCAAAGGCT +
Preference number: 5 (lower is better)
Translates to: GSWEEGRSPLVLNLPFQGYSAKY*EPRPKA
Trigger: AGCCTTTGGCCTGGGTTCCAAGTACTTTGCACTGTA...GCCCTGGAAAGGCAGGTTCAGGACCAAAGGGCTCCTGCCCTCCTCCCAACTACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR CAA 90 bp GCCCAGGGCCAGGCCAGCCTTTGGCACAATTCGGGGAGGATGGTAGTTGGGAGGACAGCAAGGAGCAGATaGAAGTCATCTCCTTCCACT +
Preference number: 5 (lower is better)
Translates to: AQGQASLWHNSGRMVVGRTARSR*KSSPST
Trigger: AGTGGAAGGAGATGACTTCAATCTGCTCCTTGCTGT...CCTCCCAACTACCATCCTCCCCGAATTGTGCCAAAGGCTGGCCTGGCCCTGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR CAA 90 bp AGCCTTTGGCACAATTCGGGGAGGATGGTAGTTGGGAGGAGGGCAGGAGCCCTTGGAGAGCCACAGCATTaGAGCTTCCCATGGGAGATG +
Preference number: 5 (lower is better)
Translates to: SLWHNSGRMVVGRRAGALGEPQH*SFPWEM
Trigger: CATCTCCCATGGGAAGCTCAAATGCTGTGGCTCTCC...AAGGGCTCCTGCCCTCCTCCCAACTACCATCCTCCCCGAATTGTGCCAAAGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR CAA 90 bp CCAGGACCCAAGGCTTTAAGGCAAAGCAGGGTGAGGGTATGTGCAGCCCAGGGCACACCTCCTCCAGAGTaGTGTCCATCAGCCCAAAAC +
Preference number: 5 (lower is better)
Translates to: PGPKALRQSRVRVCAAQGTPPPE*CPSAQN
Trigger: GTTTTGGGCTGATGGACACAACTCTGGAGGAGGTGT...GCCCTGGGCTGCACATACCCTCACCCTGCTTTGCCTTAAAGCCTTGGGTCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR CAA 90 bp GCCCAGGGCCAGGCCAGCCTTTGGCACAATTCGGGGAGGATGGTAGTTGGGAGGAGGTACTCAGAAACATaGTGGCCAGTGATGTCAGTC +
Preference number: 5 (lower is better)
Translates to: AQGQASLWHNSGRMVVGRRYSET*WPVMSV
Trigger: GACTGACATCACTGGCCACAATGTTTCTGAGTACCT...CCTCCCAACTACCATCCTCCCCGAATTGTGCCAAAGGCTGGCCTGGCCCTGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR CAA 90 bp GCCCAGCTTCTCCGTTCCTGTCATTCCACCAGGGCTGAGGCAGCCACATTCACGGCTGCTGGATTGCCCTaGCTTTTGGGTAGGTTTGCA +
Preference number: 5 (lower is better)
Translates to: AQLLRSCHSTRAEAATFTAAGLP*LLGRFA
Trigger: TGCAAACCTACCCAAAAGCAAGGGCAATCCAGCAGC...CGTGAATGTGGCTGCCTCAGCCCTGGTGGAATGACAGGAACGGAGAAGCTGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR CAA 90 bp CCAGGACCCAAGGCTTTAAGGCAAAGCAGGGTGAGGGTATGTGCAGCCCAGGGCATCTTGACCATGTCATaGTCAGCATCGCCACGGAGC +
Preference number: 5 (lower is better)
Translates to: PGPKALRQSRVRVCAAQGILTMS*SASPRS
Trigger: GCTCCGTGGCGATGCTGACAATGACATGGTCAAGAT...GCCCTGGGCTGCACATACCCTCACCCTGCTTTGCCTTAAAGCCTTGGGTCCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS GCA 90 bp TTCCACTGGGGACTGGCTGAACGTGTGCCACTGGATGCCCACTCCTaGCACTTCATACAGTGCAAAGTACTTGGAACCCAGGCCAAAGGC +
Preference number: 5 (lower is better)
Translates to: FHWGLAERVPLDAHS*HFIQCKVLGTQAKG
Trigger: GCCTTTGGCCTGGGTTCCAAGTACTTTGCACTGTATGAAGTGGCAGGAGTGGGCATCCAGTGGCACACGTTCAGCCAGTCCCCAGTGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS CCA 90 bp GTGACAGGTTCTGCATCAGGAAACGCCAAAGCTCTCTCTGGTCCCTaGCCACCGAGTCCAGAGAGAAGGATGAAACTGCAGGTCTGGCTG +
Preference number: 5 (lower is better)
Translates to: VTGSASGNAKALSGP*PPSPERRMKLQVWL
Trigger: CAGCCAGACCTGCAGTTTCATCCTTCTCTCTGGACTCGGTGGCCAGGGACCAGAGAGAGCTTTGGCGTTTCCTGATGCAGAACCTGTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS CCA 90 bp GCAAGGAAGAGCCAGATAATGAGCACGTGGCTGTGCATGAGCACCTaGCCGTACTTGAGGATGGCGGTCAGAGCTGTCACGGAGATAGAC +
Preference number: 5 (lower is better)
Translates to: ARKSQIMSTWLCMST*PYLRMAVRAVTEID
Trigger: GTCTATCTCCGTGACAGCTCTGACCGCCATCCTCAAGTACGGCCAGGTGCTCATGCACAGCCACGTGCTCATTATCTGGCTCTTCCTTGC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS CCA 90 bp AAGCATGGTGACAGCAAGGAGCAGATTGAAGTCATCTCCTTCCACTaGGGACTGGCTGAACGTGTGCCACTGGATGCCCACTCCTGCCAC +
Preference number: 5 (lower is better)
Translates to: KHGDSKEQIEVISFH*GLAERVPLDAHSCH
Trigger: GTGGCAGGAGTGGGCATCCAGTGGCACACGTTCAGCCAGTCCCCAGTGGAAGGAGATGACTTCAATCTGCTCCTTGCTGTCACCATGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS TCA 90 bp AATTGCCCTCCTCCACTACACGGTGGAGGCGTTCCAGAAGCTGGGTaGCCGTGGAGTTGGCATATTGCAGGAAGCCAAACTCATCACGCT +
Preference number: 5 (lower is better)
Translates to: NCPPPLHGGGVPEAG*PWSWHIAGSQTHHA
Trigger: AGCGTGATGAGTTTGGCTTCCTGCAATATGCCAACTCCACGGTCACCCAGCTTCTGGAACGCCTCCACCGTGTAGTGGAGGAGGGCAATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS TCA 90 bp AGAATCCCACGAAGCCCTCGACTGTCATGGCCACCAGTCCACGTGTaGCAATGTCCCACTCGAACGGGGACTTCATCTTGTCAAACTGGC +
Preference number: 5 (lower is better)
Translates to: RIPRSPRLSWPPVHV*QCPTRTGTSSCQTG
Trigger: GCCAGTTTGACAAGATGAAGTCCCCGTTCGAGTGGGACATTGTCACACGTGGACTGGTGGCCATGACAGTCGAGGGCTTCGTGGGATTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS GCA 90 bp TCCATTTGGAGCAGAGGATTGCTACCCAGGCGGCTCCAGGGCTCCTaGTTCCTAAGGAAACCCAACTTTCCATCCAGGTCAGGCAAAGGA +
Preference number: 5 (lower is better)
Translates to: SIWSRGLLPRRLQGS*FLRKPNFPSRSGKG
Trigger: TCCTTTGCCTGACCTGGATGGAAAGTTGGGTTTCCTTAGGAAGCAGGAGCCCTGGAGCCGCCTGGGTAGCAATCCTCTGCTCCAAATGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS GCA 90 bp CTGGGCGTAGTGTGTAACGTTGCCCACAAAGGCAAAGGTCTCATTTaGCTTGAGGATAACGCGGTCCGCTTCAGAGCCCACTGGTGCGTA +
Preference number: 5 (lower is better)
Translates to: LGVVCNVAHKGKGLI*LEDNAVRFRAHWCV
Trigger: TACGCACCAGTGGGCTCTGAAGCGGACCGCGTTATCCTCAAGGCAAATGAGACCTTTGCCTTTGTGGGCAACGTTACACACTACGCCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS GCA 90 bp AACTGGATCCAGCCACAGGCTGCGTTGTCTATTGTGTCAAGCTGTTaGAGGAGGGCTGTGCCATTAGGCAGTGAGAAGTCCTGGCGCAGA +
Preference number: 5 (lower is better)
Translates to: NWIQPQAALSIVSSC*RRAVPLGSEKSWRR
Trigger: TCTGCGCCAGGACTTCTCACTGCCTAATGGCACAGCCCTCCTGCAACAGCTTGACACAATAGACAACGCAGCCTGTGGCTGGATCCAGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS CCA 90 bp TTGGGCAGTGACAGGTTCTGCATCAGGAAACGCCAAAGCTCTCTCTaGTCCCTGGCCACCGAGTCCAGAGAGAAGGATGAAACTGCAGGT +
Preference number: 5 (lower is better)
Translates to: LGSDRFCIRKRQSSL*SLATESREKDETAG
Trigger: ACCTGCAGTTTCATCCTTCTCTCTGGACTCGGTGGCCAGGGACCAGAGAGAGCTTTGGCGTTTCCTGATGCAGAACCTGTCACTGCCCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS CCA 90 bp GGATCCAGACGAAGCCATAGAGGAAGTAGAAGCGACCACCGGTGTTaGGCCCTGGACGCCAATAAGCACGGCGGATCTCATTGGTTTTCT +
Preference number: 5 (lower is better)
Translates to: GSRRSHRGSRSDHRC*ALDANKHGGSHWFS
Trigger: AGAAAACCAATGAGATCCGCCGTGCTTATTGGCGTCCAGGGCCCAACACCGGTGGTCGCTTCTACTTCCTCTATGGCTTCGTCTGGATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS CCA 90 bp GTGACAGCAAGGAGCAGATTGAAGTCATCTCCTTCCACTGGGGACTaGCTGAACGTGTGCCACTGGATGCCCACTCCTGCCACTTCATAC +
Preference number: 5 (lower is better)
Translates to: VTARSRLKSSPSTGD*LNVCHWMPTPATSY
Trigger: GTATGAAGTGGCAGGAGTGGGCATCCAGTGGCACACGTTCAGCCAGTCCCCAGTGGAAGGAGATGACTTCAATCTGCTCCTTGCTGTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR CAA 90 bp CAAGCCCAGCTTCTCCGTTCCTGTCATTCCACCAGGGCTGAGGCAGCCACATTCCGTGGAGTTGGCATATaGCAGGAAGCCAAACTCATC +
Preference number: 5 (lower is better)
Translates to: QAQLLRSCHSTRAEAATFRGVGI*QEAKLI
Trigger: GATGAGTTTGGCTTCCTGCAATATGCCAACTCCACG...GAATGTGGCTGCCTCAGCCCTGGTGGAATGACAGGAACGGAGAAGCTGGGCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR CAA 90 bp CAGTCAAGGGTGTCCATGAAAAGACATCTGTGCAAGATGCTGGCCTGGGTAGACCCCAGGGAGCTCATGTaGCCTCTCCGAAGCGCTTCA +
Preference number: 5 (lower is better)
Translates to: QSRVSMKRHLCKMLAWVDPRELM*PLRSAS
Trigger: TGAAGCGCTTCGGAGAGGCAACATGAGCTCCCTGGG...GTCTACCCAGGCCAGCATCTTGCACAGATGTCTTTTCATGGACACCCTTGACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR CAA 90 bp CAAGCCCAGCTTCTCCGTTCCTGTCATTCCACCAGGGCTGAGGCAGCCACATTCATGTCCACACTCACCTaGGACATGAACTGGATCCAG +
Preference number: 5 (lower is better)
Translates to: QAQLLRSCHSTRAEAATFMSTLT*DMNWIQ
Trigger: CTGGATCCAGTTCATGTCCAAGGTGAGTGTGGACAT...GAATGTGGCTGCCTCAGCCCTGGTGGAATGACAGGAACGGAGAAGCTGGGCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR CAA 90 bp AGCCTTTGGCACAATTCGGGGAGGATGGTAGTTGGGAGGAGGGCAGGAGCCCTTTCTTCTTCAGACACCTaGAGGAACACCTCCTCCAGA +
Preference number: 5 (lower is better)
Translates to: SLWHNSGRMVVGRRAGALSSSDT*RNTSSR
Trigger: TCTGGAGGAGGTGTTCCTCAAGGTGTCTGAAGAAGA...AAGGGCTCCTGCCCTCCTCCCAACTACCATCCTCCCCGAATTGTGCCAAAGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR CAA 90 bp GGTAGTTGGGAGGAGGGCAGGAGCCCTTTGGTCCTGAACCTGCCTTTCCAGGGCACAACCTTCAGATCCTaGTCATGCTCAAAAAGCTGC +
Preference number: 5 (lower is better)
Translates to: GSWEEGRSPLVLNLPFQGTTFRS*SCSKSC
Trigger: GCAGCTTTTTGAGCATGACAAGGATCTGAAGGTTGT...GCCCTGGAAAGGCAGGTTCAGGACCAAAGGGCTCCTGCCCTCCTCCCAACTACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR CAA 90 bp GCCCAGCTTCTCCGTTCCTGTCATTCCACCAGGGCTGAGGCAGCCACATTCACGCGAGACTTGTACACCTaGGTCAGGTTCTCAATCTTG +
Preference number: 5 (lower is better)
Translates to: AQLLRSCHSTRAEAATFTRDLYT*VRFSIL
Trigger: CAAGATTGAGAACCTGACCAAGGTGTACAAGTCTCG...CGTGAATGTGGCTGCCTCAGCCCTGGTGGAATGACAGGAACGGAGAAGCTGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR CAA 90 bp GCCAGCAAGCCCAGCTTCTCCGTTCCTGTCATTCCACCAGGGCTGAGGCAGCCAGCTTGTCTGCATACTTaGTCAGTTCCAGCTTCTCTA +
Preference number: 5 (lower is better)
Translates to: ASKPSFSVPVIPPGLRQPACLHT*SVPASL
Trigger: TAGAGAAGCTGGAACTGACAAAGTATGCAGACAAGC...TGGCTGCCTCAGCCCTGGTGGAATGACAGGAACGGAGAAGCTGGGCTTGCTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR CAA 90 bp ACATTCACGGCTTCCCATGGTAGCCTAACTTCTGTACCACAGCCAAGTGAGGGACAGAGCGTATCAGTGTaGAAGGAGAGCTGGGCCCGC +
Preference number: 5 (lower is better)
Translates to: TFTASHGSLTSVPQPSEGQSVSV*KESWAR
Trigger: GCGGGCCCAGCTCTCCTTCAACACTGATACGCTCTG...TCCCTCACTTGGCTGTGGTACAGAAGTTAGGCTACCATGGGAAGCCGTGAATGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS GCA 90 bp GCTGAACGTGTGCCACTGGATGCCCACTCCTGCCACTTCATACAGTaGAAAGTACTTGGAACCCAGGCCAAAGGCTGTTGTGGACATCAG +
Preference number: 5 (lower is better)
Translates to: AERVPLDAHSCHFIQ*KVLGTQAKGCCGHQ
Trigger: CTGATGTCCACAACAGCCTTTGGCCTGGGTTCCAAGTACTTTGCACTGTATGAAGTGGCAGGAGTGGGCATCCAGTGGCACACGTTCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS GCA 90 bp GCAATGGCTACCGAAAGCTTGCGCTTCATGCCTCCAGACAACGTCTaGACCAGTGAGTGCCGCTTGTTAGAGAGTTCCAGGTCCTCAATC +
Preference number: 5 (lower is better)
Translates to: AMATESLRFMPPDNV*TSECRLLESSRSSI
Trigger: GATTGAGGACCTGGAACTCTCTAACAAGCGGCACTCACTGGTGCAGACGTTGTCTGGAGGCATGAAGCGCAAGCTTTCGGTAGCCATTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS CCA 90 bp GACGAAGCCATAGAGGAAGTAGAAGCGACCACCGGTGTTGGGCCCTaGACGCCAATAAGCACGGCGGATCTCATTGGTTTTCTCAGTGAA +
Preference number: 5 (lower is better)
Translates to: DEAIEEVEATTGVGP*TPISTADLIGFLSE
Trigger: TTCACTGAGAAAACCAATGAGATCCGCCGTGCTTATTGGCGTCCAGGGCCCAACACCGGTGGTCGCTTCTACTTCCTCTATGGCTTCGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS CCA 90 bp GTGTTCAATGACAAACAGGAAGTCGTCACGGGTGTAGCAGGGGTATaGGAACATCTGCACGTAGTTGCCAGGTTCGACCACGTCATGCCC +
Preference number: 5 (lower is better)
Translates to: VFNDKQEVVTGVAGV*EHLHVVARFDHVMP
Trigger: GGGCATGACGTGGTCGAACCTGGCAACTACGTGCAGATGTTCCCATACCCCTGCTACACCCGTGACGACTTCCTGTTTGTCATTGAACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS CCA 90 bp GTGGAGGTAGGTCACCAATCTCAGGGACAGACAACGCCACAGTCATaGCCACACAGACAAAGAAGGCAGGCAGCAGAATCTGAGAGCAGA +
Preference number: 5 (lower is better)
Translates to: VEVGHQSQGQTTPQS*PHRQRRQAAESESR
Trigger: TCTGCTCTCAGATTCTGCTGCCTGCCTTCTTTGTCTGTGTGGCCATGACTGTGGCGTTGTCTGTCCCTGAGATTGGTGACCTACCTCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR CAA 90 bp GGTAGTTGGGAGGAGGGCAGGAGCCCTTTGGTCCTGAACCTGCCTTTCCAGGGCAGATTGAGGCTCAGTTaGTTTAAGGCCATCTTCTTG +
Preference number: 5 (lower is better)
Translates to: GSWEEGRSPLVLNLPFQGRLRLS*FKAIFL
Trigger: CAAGAAGATGGCCTTAAACAAACTGAGCCTCAATCT...GCCCTGGAAAGGCAGGTTCAGGACCAAAGGGCTCCTGCCCTCCTCCCAACTACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR CAA 90 bp GCCCAGCTTCTCCGTTCCTGTCATTCCACCAGGGCTGAGGCAGCCACATTCACGGTCAGGTTCTCAATCTaGACCATGTCATTGTCAGCA +
Preference number: 5 (lower is better)
Translates to: AQLLRSCHSTRAEAATFTVRFSI*TMSLSA
Trigger: TGCTGACAATGACATGGTCAAGATTGAGAACCTGAC...CGTGAATGTGGCTGCCTCAGCCCTGGTGGAATGACAGGAACGGAGAAGCTGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS TCA 90 bp AGGCTGTTGTGGACATCAGGGACGCAATGCACTTCTCGAAGGCAGTaGTCTTGTCATGGGCTACCTCCTCGCGGATCGCTACATACATGT +
Preference number: 5 (lower is better)
Translates to: RLLWTSGTQCTSRRQ*SCHGLPPRGSLHTC
Trigger: ACATGTATGTAGCGATCCGCGAGGAGGTAGCCCATGACAAGATCACTGCCTTCGAGAAGTGCATTGCGTCCCTGATGTCCACAACAGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS GCA 90 bp GATGTCCACACTCACCTTGGACATGAACTGGATCCAGCCACAGGCTaGGTTGTCTATTGTGTCAAGCTGTTGCAGGAGGGCTGTGCCATT +
Preference number: 5 (lower is better)
Translates to: DVHTHLGHELDPATG*VVYCVKLLQEGCAI
Trigger: AATGGCACAGCCCTCCTGCAACAGCTTGACACAATAGACAACGCAGCCTGTGGCTGGATCCAGTTCATGTCCAAGGTGAGTGTGGACATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS GCA 90 bp GAAAGCTTGCGCTTCATGCCTCCAGACAACGTCTGCACCAGTGAGTaGCGCTTGTTAGAGAGTTCCAGGTCCTCAATCATCTTGTCCGTC +
Preference number: 5 (lower is better)
Translates to: ESLRFMPPDNVCTSE*RLLESSRSSIILSV
Trigger: GACGGACAAGATGATTGAGGACCTGGAACTCTCTAACAAGCGGCACTCACTGGTGCAGACGTTGTCTGGAGGCATGAAGCGCAAGCTTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS CCA 90 bp AACAAATTGCCCTCCTCCACTACACGGTGGAGGCGTTCCAGAAGCTaGGTGACCGTGGAGTTGGCATATTGCAGGAAGCCAAACTCATCA +
Preference number: 5 (lower is better)
Translates to: NKLPSSTTRWRRSRS*VTVELAYCRKPNSS
Trigger: TGATGAGTTTGGCTTCCTGCAATATGCCAACTCCACGGTCACCCAGCTTCTGGAACGCCTCCACCGTGTAGTGGAGGAGGGCAATTTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS CCA 90 bp TTAGTAGACACAGGCAGGCGTTGTGGCTGCCGTAGGAAGTTATACTaGCACATGATGGTGAGGAAGAATCCCACGAAGCCCTCGACTGTC +
Preference number: 5 (lower is better)
Translates to: LVDTGRRCGCRRKLY*HMMVRKNPTKPSTV
Trigger: GACAGTCGAGGGCTTCGTGGGATTCTTCCTCACCATCATGTGCCAGTATAACTTCCTACGGCAGCCACAACGCCTGCCTGTGTCTACTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR CAA 90 bp ACATTCACGGCTTCCCATGGTAGCCTAACTTCTGTACCACAGCCAAGTGAGGGATGCCCCACAAATGTGTaGATGATGGCGCGCTCCATC +
Preference number: 5 (lower is better)
Translates to: TFTASHGSLTSVPQPSEGCPTNV*MMARSI
Trigger: GATGGAGCGCGCCATCATCAACACATTTGTGGGGCA...TCCCTCACTTGGCTGTGGTACAGAAGTTAGGCTACCATGGGAAGCCGTGAATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS TCA 90 bp CATGTAGGGAACGTAGCTCAGGAAGTAGATGATACCGCCACAGGCTaGGGCCAACTTAGCCTTAGAGTACAGCACAGACACCAGGAAGCA +
Preference number: 5 (lower is better)
Translates to: HVGNVAQEVDDTATG*GQLSLRVQHRHQEA
Trigger: TGCTTCCTGGTGTCTGTGCTGTACTCTAAGGCTAAGTTGGCCTCAGCCTGTGGCGGTATCATCTACTTCCTGAGCTACGTTCCCTACATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS TCA 90 bp TACCGAAAGCTTGCGCTTCATGCCTCCAGACAACGTCTGCACCAGTaGGTGCCGCTTGTTAGAGAGTTCCAGGTCCTCAATCATCTTGTC +
Preference number: 5 (lower is better)
Translates to: YRKLALHASRQRLHQ*VPLVREFQVLNHLV
Trigger: GACAAGATGATTGAGGACCTGGAACTCTCTAACAAGCGGCACTCACTGGTGCAGACGTTGTCTGGAGGCATGAAGCGCAAGCTTTCGGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS TCA 90 bp CATCAGCCTCGCTGTTCTCCAGTGACTGATCTTCTTCAGACACCTTaGGGAACACCTCCTCCAGAGTTGTGTCCATCAGCCCAAAACTGC +
Preference number: 5 (lower is better)
Translates to: HQPRCSPVTDLLQTP*GTPPPELCPSAQNC
Trigger: GCAGTTTTGGGCTGATGGACACAACTCTGGAGGAGGTGTTCCTCAAGGTGTCTGAAGAAGATCAGTCACTGGAGAACAGCGAGGCTGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS TCA 90 bp CACCTGCTCCATCTTGCTGAACACCTGAGCCAGCGAGATGTGCTCTaGCTTGAGCTGATACTGCACCTTCGTATGGTGTCTTTCCTTGAG +
Preference number: 5 (lower is better)
Translates to: HLLHLAEHLSQRDVL*LELILHLRMVSFLE
Trigger: CTCAAGGAAAGACACCATACGAAGGTGCAGTATCAGCTCAAGTCAGAGCACATCTCGCTGGCTCAGGTGTTCAGCAAGATGGAGCAGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS GCA 90 bp CACTGCAATCTTCCGCACCATAGGAGGGACCCGGGCACCAAAGGATaGTGGGATAGACTTCTGAACATTACCAAAGGTGATGGCTCCATA +
Preference number: 5 (lower is better)
Translates to: HCNLPHHRRDPGTKG*WDRLLNITKGDGSI
Trigger: TATGGAGCCATCACCTTTGGTAATGTTCAGAAGTCTATCCCAGCATCCTTTGGTGCCCGGGTCCCTCCTATGGTGCGGAAGATTGCAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS CCA 90 bp CTGATACTGCACCTTCGTATGGTGTCTTTCCTTGAGCATGGCCTCTaGGAAGTTCCTGTTGAAGAACCGCACCACGTCCTTCACGTTCTG +
Preference number: 5 (lower is better)
Translates to: LILHLRMVSFLEHGL*EVPVEEPHHVLHVL
Trigger: CAGAACGTGAAGGACGTGGTGCGGTTCTTCAACAGGAACTTCCCAGAGGCCATGCTCAAGGAAAGACACCATACGAAGGTGCAGTATCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR CAA 90 bp CAGTCAAGGGTGTCCATGAAAAGACATCTGTGCAAGATGCTGGCCTGGGTAGACTCTCCAGTCAGCATCTaGAAGGTGCTGGTCTTCCCT +
Preference number: 5 (lower is better)
Translates to: QSRVSMKRHLCKMLAWVDSPVSI*KVLVFP
Trigger: AGGGAAGACCAGCACCTTCAAGATGCTGACTGGAGA...GTCTACCCAGGCCAGCATCTTGCACAGATGTCTTTTCATGGACACCCTTGACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS TCA 90 bp ACCATAGGAGGGACCCGGGCACCAAAGGATGCTGGGATAGACTTCTaGACATTACCAAAGGTGATGGCTCCATATCGGTGTAGTCGGAAA +
Preference number: 5 (lower is better)
Translates to: TIGGTRAPKDAGIDF*TLPKVMAPYRCSRK
Trigger: TTTCCGACTACACCGATATGGAGCCATCACCTTTGGTAATGTTCAGAAGTCTATCCCAGCATCCTTTGGTGCCCGGGTCCCTCCTATGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS CCA 90 bp AGTCGGAAACGGTCAGAGGTGAAGAGCAGGTACTCAGAAACATTGTaGCCAGTGATGTCAGTCAGGATGTCACCTGTGACCACTCTCATC +
Preference number: 5 (lower is better)
Translates to: SRKRSEVKSRYSETL*PVMSVRMSPVTTLI
Trigger: GATGAGAGTGGTCACAGGTGACATCCTGACTGACATCACTGGCCACAATGTTTCTGAGTACCTGCTCTTCACCTCTGACCGTTTCCGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR CAA 90 bp AAGGGTGTCCATGAAAAGACATCTGTGCAAGATGCTGGCCTGGGTAGACTTGCGTATTGTGTCAAGCTGTaGCAGGAGGGCTGTGCCATT +
Preference number: 5 (lower is better)
Translates to: KGVHEKTSVQDAGLGRLAYCVKL*QEGCAI
Trigger: AATGGCACAGCCCTCCTGCAACAGCTTGACACAATA...CGCAAGTCTACCCAGGCCAGCATCTTGCACAGATGTCTTTTCATGGACACCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS TCA 90 bp TCAGTTTGTTTAAGGCCATCTTCTTGTCATTCTTATAGACCTTGGTaGGCTTGTCCACACAGACGACCAAGGGCAGGTGGGTGGGCTCCT +
Preference number: 5 (lower is better)
Translates to: SVCLRPSSCHSYRPW*ACPHRRPRAGGWAP
Trigger: AGGAGCCCACCCACCTGCCCTTGGTCGTCTGTGTGGACAAGCTCACCAAGGTCTATAAGAATGACAAGAAGATGGCCTTAAACAAACTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS CCA 90 bp GATGGTCATGGCCACAGAGTAGACCCAGGAGATCACCATGCACAATaGCATCATGTGTTCAATGACAAACAGGAAGTCGTCACGGGTGTA +
Preference number: 5 (lower is better)
Translates to: DGHGHRVDPGDHHAQ*HHVFNDKQEVVTGV
Trigger: TACACCCGTGACGACTTCCTGTTTGTCATTGAACACATGATGCCATTGTGCATGGTGATCTCCTGGGTCTACTCTGTGGCCATGACCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR CAA 90 bp CAGTCAAGGGTGTCCATGAAAAGACATCTGTGCAAGATGCTGGCCTGGGTAGACTCATCAGGAAATCCCTaGAAGATGTCCACACTCACC +
Preference number: 5 (lower is better)
Translates to: QSRVSMKRHLCKMLAWVDSSGNP*KMSTLT
Trigger: GGTGAGTGTGGACATCTTCAAGGGATTTCCTGATGA...GTCTACCCAGGCCAGCATCTTGCACAGATGTCTTTTCATGGACACCCTTGACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR CAA 90 bp AAGGGTGTCCATGAAAAGACATCTGTGCAAGATGCTGGCCTGGGTAGACTTGCGTCTTGTAAGCTGACATaGTCTGGGTCCTGCAAGTTG +
Preference number: 5 (lower is better)
Translates to: KGVHEKTSVQDAGLGRLASCKLT*SGSCKL
Trigger: CAACTTGCAGGACCCAGACAATGTCAGCTTACAAGA...CGCAAGTCTACCCAGGCCAGCATCTTGCACAGATGTCTTTTCATGGACACCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR CAA 90 bp AAGGGTGTCCATGAAAAGACATCTGTGCAAGATGCTGGCCTGGGTAGACTTGCGAACGGGGACTTCATCTaGTCAAACTGGCCAATCTTG +
Preference number: 5 (lower is better)
Translates to: KGVHEKTSVQDAGLGRLANGDFI*SNWPIL
Trigger: CAAGATTGGCCAGTTTGACAAGATGAAGTCCCCGTT...CGCAAGTCTACCCAGGCCAGCATCTTGCACAGATGTCTTTTCATGGACACCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS TCA 90 bp ACGCCAATAAGCACGGCGGATCTCATTGGTTTTCTCAGTGAAGCTTaGATTCTGGCGAATCTTGTAATGTACATGTGGAGGGAGGGAGCC +
Preference number: 5 (lower is better)
Translates to: TPISTADLIGFLSEA*ILANLVMYMWREGA
Trigger: GGCTCCCTCCCTCCACATGTACATTACAAGATTCGCCAGAATTCAAGCTTCACTGAGAAAACCAATGAGATCCGCCGTGCTTATTGGCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS TCA 90 bp GCCCTGGACGCCAATAAGCACGGCGGATCTCATTGGTTTTCTCAGTaGAGCTTGAATTCTGGCGAATCTTGTAATGTACATGTGGAGGGA +
Preference number: 5 (lower is better)
Translates to: ALDANKHGGSHWFSQ*SLNSGESCNVHVEG
Trigger: TCCCTCCACATGTACATTACAAGATTCGCCAGAATTCAAGCTTCACTGAGAAAACCAATGAGATCCGCCGTGCTTATTGGCGTCCAGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS-3UTR CAA 90 bp ACATTCACGGCTTCCCATGGTAGCCTAACTTCTGTACCACAGCCAAGTGAGGGAACGTTCTGGCTGCTTTaGGTCCTTACAGTAATCATG +
Preference number: 5 (lower is better)
Translates to: TFTASHGSLTSVPQPSEGTFWLL*VLTVIM
Trigger: CATGATTACTGTAAGGACCAAAAGCAGCCAGAACGT...TCCCTCACTTGGCTGTGGTACAGAAGTTAGGCTACCATGGGAAGCCGTGAATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS GCA 72 bp AGACGACCAAGGGCAGGTGGGTGGGCTCCTCCTCCATaGCGCGGGTCTCCTCGAAGTGCCGGCTCTCCATGG +
Preference number: 6 (lower is better)
Translates to: RRPRAGGWAPPP*RGSPRSAGSPW
Trigger: CCATGGAGAGCCGGCACTTCGAGGAGACCCGCGGCATGGAGGAGGAGCCCACCCACCTGCCCTTGGTCGTCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS GCA 72 bp CTGGTCCTCCTCCATAACGCTGAGGCGCGGTGTGTGTaGCCATGGCCAGCTCCACTCCCAGGCTTCTGTCCG +
Preference number: 6 (lower is better)
Translates to: LVLLHNAEARCV*PWPAPLPGFCP
Trigger: CGGACAGAAGCCTGGGAGTGGAGCTGGCCATGGGCACACACACCGCGCCTCAGCGTTATGGAGGAGGACCAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS CCA 72 bp CTATCCCGGTGCTGTTGGCCAGGCCATTCAGGCTGCTaGCTTGAGGTGCAGAGGCCTGGCCAGCACAGGCAC +
Preference number: 6 (lower is better)
Translates to: LSRCCWPGHSGC*LEVQRPGQHRH
Trigger: GTGCCTGTGCTGGCCAGGCCTCTGCACCTCAAGCCAGCAGCCTGAATGGCCTGGCCAACAGCACCGGGATAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS TCA 72 bp GAGGGCCTCCAGACGTTGGCGCAGAGCCTCGAGCTCTaGGCCCAGGCTGGGTCGCACTGGGTCGAACAAATT +
Preference number: 6 (lower is better)
Translates to: EGLQTLAQSLEL*AQAGSHWVEQI
Trigger: AATTTGTTCGACCCAGTGCGACCCAGCCTGGGCTCAGAGCTCGAGGCTCTGCGCCAACGTCTGGAGGCCCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS TCA 72 bp CCAGTTGCTGAAAGAGGCGCTCGAAGGCCCCCTTCTTaGCGGCCTCGCTGGGCAGGATGTAGGAGAGCTCGG +
Preference number: 6 (lower is better)
Translates to: PVAERGARRPPS*RPRWAGCRRAR
Trigger: CCGAGCTCTCCTACATCCTGCCCAGCGAGGCCGTCAAGAAGGGGGCCTTCGAGCGCCTCTTTCAGCAACTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS TCA 72 bp TCAGCATGGGTCCCAGGGAGCCGTTGGCAGGAGACTTaGGCACACAAGTGGCACCCACACCAGAGGGCAGCC +
Preference number: 6 (lower is better)
Translates to: SAWVPGSRWQET*AHKWHPHQRAA
Trigger: GGCTGCCCTCTGGTGTGGGTGCCACTTGTGTGCTCAAGTCTCCTGCCAACGGCTCCCTGGGACCCATGCTGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS GCA 72 bp CACAAGTGGCACCCACACCAGAGGGCAGCCGGAATGTaGTCACCAGCTGCTGGGGGCTGGCATCAGGTGACA +
Preference number: 6 (lower is better)
Translates to: HKWHPHQRAAGM*SPAAGGWHQVT
Trigger: TGTCACCTGATGCCAGCCCCCAGCAGCTGGTGAGCACATTCCGGCTGCCCTCTGGTGTGGGTGCCACTTGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS GCA 72 bp CGAAGAACCGTGCCGCCAGCAGGCGGGACTCTCCACTaGTTAAGTTCAGCATGGGTCCCAGGGAGCCGTTGG +
Preference number: 6 (lower is better)
Translates to: RRTVPPAGGTLH*LSSAWVPGSRW
Trigger: CCAACGGCTCCCTGGGACCCATGCTGAACTTAAGCAGTGGAGAGTCCCGCCTGCTGGCGGCACGGTTCTTCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS CCA 72 bp ACCTCGGAAGGGTCCACACGGGCAGCTAGGAGGGCTTaGGCCGTGCTGTTGGGCAGTGACAGGTTCTGCATC +
Preference number: 6 (lower is better)
Translates to: TSEGSTRAARRA*AVLLGSDRFCI
Trigger: GATGCAGAACCTGTCACTGCCCAACAGCACGGCCCAAGCCCTCCTAGCTGCCCGTGTGGACCCTTCCGAGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS CCA 72 bp GTGGGGACGGTGCCTGTGGCTGGGGATCTGAGCCGTTaGGGACATCGAAGCCCAGCTGCTGAGCAATCTTGG +
Preference number: 6 (lower is better)
Translates to: VGTVPVAGDLSR*GHRSPAAEQSW
Trigger: CCAAGATTGCTCAGCAGCTGGGCTTCGATGTCCCCAACGGCTCAGATCCCCAGCCACAGGCACCGTCCCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS CCA 72 bp GTCTCCTCGAAGTGCCGGCTCTCCATGGCACAGGCCTaGTCCTCCTCCATAACGCTGAGGCGCGGTGTGTGT +
Preference number: 6 (lower is better)
Translates to: VSSKCRLSMAQA*SSSITLRRGVC
Trigger: ACACACACCGCGCCTCAGCGTTATGGAGGAGGACCAGGCCTGTGCCATGGAGAGCCGGCACTTCGAGGAGAC
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS CAA 90 bp AGCTCGGTGCTCGTGTCTGAGACCAGCAGGGAGGAAGCCACATGCTaGCGGATGAACTGGGACACTTGCGGCTCCGAGCAGCTGCTCAGC +
Preference number: 6 (lower is better)
Translates to: SSVLVSETSREEATC*RMNWDTCGSEQLLS
Trigger: GCTGAGCAGCTGCTCGGAGCCGCAAGTGTCCCAGTTCATCCGCAAGCATGTGGCTTCCTCCCTGCTGGTCTCAGACACGAGCACCGAGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS TCA 72 bp ACTCATCACGCTGGCCATCAGGGCAAAGCGACTGCATaGCGGGCAGGATGCCGGCTGATGTCAGCGGTGCTG +
Preference number: 6 (lower is better)
Translates to: THHAGHQGKATA*RAGCRLMSAVL
Trigger: CAGCACCGCTGACATCAGCCGGCATCCTGCCCGTCATGCAGTCGCTTTGCCCTGATGGCCAGCGTGATGAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS GCA 72 bp CCAGCCCAGAGCTGCACAAAGGCTGAGCACTGCCCTTaGAGAGTGTCAGGAGAGGCTGGGCTGACAGGTGAC +
Preference number: 6 (lower is better)
Translates to: PAQSCTKAEHCP*RVSGEAGLTGD
Trigger: GTCACCTGTCAGCCCAGCCTCTCCTGACACTCTGCAAGGGCAGTGCTCAGCCTTTGTGCAGCTCTGGGCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS GCA 72 bp GCACAGTGGAAGCGCTTCACCAGGAGCCCATGGAACTaGCGCATCTTCAGCCACCAGCCCTCGAGTTTGCGG +
Preference number: 6 (lower is better)
Translates to: AQWKRFTRSPWN*RIFSHQPSSLR
Trigger: CCGCAAACTCGAGGGCTGGTGGCTGAAGATGCGGCAGTTCCATGGGCTCCTGGTGAAGCGCTTCCACTGTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS GCA 72 bp CTCTCCAGGGCGCACACCCAGGCAAAGGCGGTCCACTaGCAGGATCCGGCCAATCTTCCGAGACTTGTACAC +
Preference number: 6 (lower is better)
Translates to: LSRAHTQAKAVH*QDPANLPRLVH
Trigger: GTGTACAAGTCTCGGAAGATTGGCCGGATCCTGGCAGTGGACCGCCTTTGCCTGGGTGTGCGCCCTGGAGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS CCA 72 bp TGGTTCCTGAGCTCAGCGGCCAAATCGCTGAAGCGCTaGGCACGAGCTGTAGCCTGCCCACTGCACACAGCA +
Preference number: 6 (lower is better)
Translates to: WFLSSAAKSLKR*ARAVACPLHTA
Trigger: TGCTGTGTGCAGTGGGCAGGCTACAGCTCGTGCCCAGCGCTTCAGCGATTTGGCCGCTGAGCTCAGGAACCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS CCA 72 bp ACCAGCAGGGAGGAAGCCACATGCTTGCGGATGAACTaGGACACTTGCGGCTCCGAGCAGCTGCTCAGCCGA +
Preference number: 6 (lower is better)
Translates to: TSREEATCLRMN*DTCGSEQLLSR
Trigger: TCGGCTGAGCAGCTGCTCGGAGCCGCAAGTGTCCCAGTTCATCCGCAAGCATGTGGCTTCCTCCCTGCTGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS CAA 72 bp GGAGGAAGCCACATGCTTGCGGATGAACTGGGACACTaGCGGCTCCGAGCAGCTGCTCAGCCGAGGACAACC +
Preference number: 6 (lower is better)
Translates to: GGSHMLADELGH*RLRAAAQPRTT
Trigger: GGTTGTCCTCGGCTGAGCAGCTGCTCGGAGCCGCAAGTGTCCCAGTTCATCCGCAAGCATGTGGCTTCCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS CAA 90 bp TCGGAAGGGTCCACACGGGCAGCTAGGAGGGCTTGGGCCGTGCTGTaGGGCAGTGACAGGTTCTGCATCAGGAAACGCCAAAGCTCTCTC +
Preference number: 6 (lower is better)
Translates to: SEGSTRAARRAWAVL*GSDRFCIRKRQSSL
Trigger: GAGAGAGCTTTGGCGTTTCCTGATGCAGAACCTGTCACTGCCCAACAGCACGGCCCAAGCCCTCCTAGCTGCCCGTGTGGACCCTTCCGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS CAA 90 bp CGGGACTCTCCACTGCTTAAGTTCAGCATGGGTCCCAGGGAGCCGTaGGCAGGAGACTTGAGCACACAAGTGGCACCCACACCAGAGGGC +
Preference number: 6 (lower is better)
Translates to: RDSPLLKFSMGPREP*AGDLSTQVAPTPEG
Trigger: GCCCTCTGGTGTGGGTGCCACTTGTGTGCTCAAGTCTCCTGCCAACGGCTCCCTGGGACCCATGCTGAACTTAAGCAGTGGAGAGTCCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS TCA 72 bp CTGAGACCAGCAGGGAGGAAGCCACATGCTTGCGGATaGACTGGGACACTTGCGGCTCCGAGCAGCTGCTCA +
Preference number: 6 (lower is better)
Translates to: LRPAGRKPHACG*TGTLAAPSSCS
Trigger: TGAGCAGCTGCTCGGAGCCGCAAGTGTCCCAGTTCATCCGCAAGCATGTGGCTTCCTCCCTGCTGGTCTCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS TCA 72 bp GCTGGGCAGGATGTAGGAGAGCTCGGTGCTCGTGTCTaGGACCAGCAGGGAGGAAGCCACATGCTTGCGGAT +
Preference number: 6 (lower is better)
Translates to: AGQDVGELGARV*DQQGGSHMLAD
Trigger: ATCCGCAAGCATGTGGCTTCCTCCCTGCTGGTCTCAGACACGAGCACCGAGCTCTCCTACATCCTGCCCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS GCA 72 bp CCAAACTCATCACGCTGGCCATCAGGGCAAAGCGACTaGATGACGGGCAGGATGCCGGCTGATGTCAGCGGT +
Preference number: 6 (lower is better)
Translates to: PNSSRWPSGQSD*MTGRMPADVSG
Trigger: ACCGCTGACATCAGCCGGCATCCTGCCCGTCATGCAGTCGCTTTGCCCTGATGGCCAGCGTGATGAGTTTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS GCA 72 bp CTGAGCCCAGGCTGGGTCGCACTGGGTCGAACAAATTaGCCTCCTCCACTACACGGTGGAGGCGTTCCAGAA +
Preference number: 6 (lower is better)
Translates to: LSPGWVALGRTN*PPPLHGGGVPE
Trigger: TTCTGGAACGCCTCCACCGTGTAGTGGAGGAGGGCAATTTGTTCGACCCAGTGCGACCCAGCCTGGGCTCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS GCA 72 bp ATGGCCAGCTCCACTCCCAGGCTTCTGTCCGCCCACTaGCCAGCCAATAGGACTTCTGTAGCGGGAAGTACC +
Preference number: 6 (lower is better)
Translates to: MASSTPRLLSAH*PANRTSVAGST
Trigger: GGTACTTCCCGCTACAGAAGTCCTATTGGCTGGGCAGTGGGCGGACAGAAGCCTGGGAGTGGAGCTGGCCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS GCA 72 bp GTGCTCGTGTCTGAGACCAGCAGGGAGGAAGCCACATaGTTGCGGATGAACTGGGACACTTGCGGCTCCGAG +
Preference number: 6 (lower is better)
Translates to: VLVSETSREEAT*LRMNWDTCGSE
Trigger: CTCGGAGCCGCAAGTGTCCCAGTTCATCCGCAAGCATGTGGCTTCCTCCCTGCTGGTCTCAGACACGAGCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS GCA 72 bp TCCTTCCAGGGGATGCCACGCAGCCGCGTGTACAGCTaGAGGTGTTCACGAGCCGTGAGCTCATCAAACAGG +
Preference number: 6 (lower is better)
Translates to: SFQGMPRSRVYS*RCSRAVSSSNR
Trigger: CCTGTTTGATGAGCTCACGGCTCGTGAACACCTGCAGCTGTACACGCGGCTGCGTGGCATCCCCTGGAAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS GCA 72 bp CCCACTTCACTACCTGTGCCTCATCCTTCCAGGGGATaGCACGCAGCCGCGTGTACAGCTGCAGGTGTTCAC +
Preference number: 6 (lower is better)
Translates to: PTSLPVPHPSRG*HAAACTAAGVH
Trigger: GTGAACACCTGCAGCTGTACACGCGGCTGCGTGGCATCCCCTGGAAGGATGAGGCACAGGTAGTGAAGTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS CAA 72 bp TCTGAGCCCAGGCTGGGTCGCACTGGGTCGAACAAATaGCCCTCCTCCACTACACGGTGGAGGCGTTCCAGA +
Preference number: 6 (lower is better)
Translates to: SEPRLGRTGSNK*PSSTTRWRRSR
Trigger: TCTGGAACGCCTCCACCGTGTAGTGGAGGAGGGCAATTTGTTCGACCCAGTGCGACCCAGCCTGGGCTCAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS CAA 72 bp TCCACACGGGCAGCTAGGAGGGCTTGGGCCGTGCTGTaGGGCAGTGACAGGTTCTGCATCAGGAAACGCCAA +
Preference number: 6 (lower is better)
Translates to: STRAARRAWAVL*GSDRFCIRKRQ
Trigger: TTGGCGTTTCCTGATGCAGAACCTGTCACTGCCCAACAGCACGGCCCAAGCCCTCCTAGCTGCCCGTGTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS CAA 72 bp CCTCTCCGAAGCGCTTCAGGCTCGATGGTGCGGTTGTaGCCACACAAGATGGGTTGCAAGCCAGCCCAGAGC +
Preference number: 6 (lower is better)
Translates to: PLRSASGSMVRL*PHKMGCKPAQS
Trigger: GCTCTGGGCTGGCTTGCAACCCATCTTGTGTGGCAACAACCGCACCATCGAGCCTGAAGCGCTTCGGAGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS CAA 72 bp AGGTGCTCCTCCACCGTGAGCCGGTCAAAGAGCACGTaGTGCTGTGGGCACATGCCCAGGTTCTTGCGGATC +
Preference number: 6 (lower is better)
Translates to: RCSSTVSRSKST*CCGHMPRFLRI
Trigger: GATCCGCAAGAACCTGGGCATGTGCCCACAGCACAACGTGCTCTTTGACCGGCTCACGGTGGAGGAGCACCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS CAA 72 bp CTCGTGTCTGAGACCAGCAGGGAGGAAGCCACATGCTaGCGGATGAACTGGGACACTTGCGGCTCCGAGCAG +
Preference number: 6 (lower is better)
Translates to: LVSETSREEATC*RMNWDTCGSEQ
Trigger: CTGCTCGGAGCCGCAAGTGTCCCAGTTCATCCGCAAGCATGTGGCTTCCTCCCTGCTGGTCTCAGACACGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS CAA 90 bp GAGGCTGGGCTGACAGGTGACTGGGTGCCCTCCTCAACAGTGGTGTaGGAACCTGAATTTGCACCTATCCCGGTGCTGTTGGCCAGGCCA +
Preference number: 6 (lower is better)
Translates to: EAGLTGDWVPSSTVV*EPEFAPIPVLLARP
Trigger: TGGCCTGGCCAACAGCACCGGGATAGGTGCAAATTCAGGTTCCAACACCACTGTTGAGGAGGGCACCCAGTCACCTGTCAGCCCAGCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS CAA 90 bp CTGCTTAAGTTCAGCATGGGTCCCAGGGAGCCGTTGGCAGGAGACTaGAGCACACAAGTGGCACCCACACCAGAGGGCAGCCGGAATGTG +
Preference number: 6 (lower is better)
Translates to: LLKFSMGPREPLAGD*STQVAPTPEGSRNV
Trigger: CACATTCCGGCTGCCCTCTGGTGTGGGTGCCACTTGTGTGCTCAAGTCTCCTGCCAACGGCTCCCTGGGACCCATGCTGAACTTAAGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS TCA 72 bp AGGGCAAAGCGACTGCATGACGGGCAGGATGCCGGCTaGTGTCAGCGGTGCTGCGGTGTAGAAAGCTTCCTT +
Preference number: 6 (lower is better)
Translates to: RAKRLHDGQDAG*CQRCCGVESFL
Trigger: AAGGAAGCTTTCTACACCGCAGCACCGCTGACATCAGCCGGCATCCTGCCCGTCATGCAGTCGCTTTGCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS TCA 72 bp CATCTCGGTGCGGATGTCGTGCCCATAGATAGTGGCTaGGCCCGACGTGGGTGGGAACAGTCCAGTCAGGAT +
Preference number: 6 (lower is better)
Translates to: HLGADVVPIDSG*ARRGWEQSSQD
Trigger: ATCCTGACTGGACTGTTCCCACCCACGTCGGGCTCAGCCACTATCTATGGGCACGACATCCGCACCGAGATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS GCA 72 bp AGGGCTTGGGCCGTGCTGTTGGGCAGTGACAGGTTCTaGATCAGGAAACGCCAAAGCTCTCTCTGGTCCCTG +
Preference number: 6 (lower is better)
Translates to: RAWAVLLGSDRF*IRKRQSSLWSL
Trigger: CAGGGACCAGAGAGAGCTTTGGCGTTTCCTGATGCAGAACCTGTCACTGCCCAACAGCACGGCCCAAGCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS GCA 72 bp GGCTCGATGGTGCGGTTGTTGCCACACAAGATGGGTTaGAAGCCAGCCCAGAGCTGCACAAAGGCTGAGCAC +
Preference number: 6 (lower is better)
Translates to: GSMVRLLPHKMG*KPAQSCTKAEH
Trigger: GTGCTCAGCCTTTGTGCAGCTCTGGGCTGGCTTGCAACCCATCTTGTGTGGCAACAACCGCACCATCGAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS GCA 72 bp CTCTCCGAAGCGCTTCAGGCTCGATGGTGCGGTTGTTaGCACACAAGATGGGTTGCAAGCCAGCCCAGAGCT +
Preference number: 6 (lower is better)
Translates to: LSEALQARWCGC*HTRWVASQPRA
Trigger: AGCTCTGGGCTGGCTTGCAACCCATCTTGTGTGGCAACAACCGCACCATCGAGCCTGAAGCGCTTCGGAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS GCA 72 bp AGCTGCACAAAGCCCGTGATGAACCAGGCCACCCAGTaGACGGCGTTGTTCAGGCCCATCGTCTTCATCACC +
Preference number: 6 (lower is better)
Translates to: SCTKPVMNQATQ*TALFRPIVFIT
Trigger: GGTGATGAAGACGATGGGCCTGAACAACGCCGTGCACTGGGTGGCCTGGTTCATCACGGGCTTTGTGCAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS GCA 72 bp AGGATGGCGGTCAGAGCTGTCACGGAGATAGACAGCTaGACAAAGCCCGTGATGAACCAGGCCACCCAGTGC +
Preference number: 6 (lower is better)
Translates to: RMAVRAVTEIDS*TKPVMNQATQC
Trigger: GCACTGGGTGGCCTGGTTCATCACGGGCTTTGTGCAGCTGTCTATCTCCGTGACAGCTCTGACCGCCATCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS GCA 72 bp CTTGTTATTGTAGAGCACCTGAGCCACCCTCCGCACTaGAATCTTCCGCACCATAGGAGGGACCCGGGCACC +
Preference number: 6 (lower is better)
Translates to: LVIVEHLSHPPH*NLPHHRRDPGT
Trigger: GGTGCCCGGGTCCCTCCTATGGTGCGGAAGATTGCAGTGCGGAGGGTGGCTCAGGTGCTCTACAATAACAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS CCA 72 bp CCCTCCTCCACTACACGGTGGAGGCGTTCCAGAAGCTaGGTGACCGTGGAGTTGGCATATTGCAGGAAGCCA +
Preference number: 6 (lower is better)
Translates to: PSSTTRWRRSRS*VTVELAYCRKP
Trigger: TGGCTTCCTGCAATATGCCAACTCCACGGTCACCCAGCTTCTGGAACGCCTCCACCGTGTAGTGGAGGAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS CAA 72 bp TTGCCTCTCCGAAGCGCTTCAGGCTCGATGGTGCGGTaGTTGCCACACAAGATGGGTTGCAAGCCAGCCCAG +
Preference number: 6 (lower is better)
Translates to: LPLRSASGSMVR*LPHKMGCKPAQ
Trigger: CTGGGCTGGCTTGCAACCCATCTTGTGTGGCAACAACCGCACCATCGAGCCTGAAGCGCTTCGGAGAGGCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS CAA 72 bp CGGTCCGCTTCAGAGCCCACTGGTGCGTACAGGATTTaGGGGTTGCTGGTCATGAGGTGCACTAGAAGGCCC +
Preference number: 6 (lower is better)
Translates to: RSASEPTGAYRI*GLLVMRCTRRP
Trigger: GGGCCTTCTAGTGCACCTCATGACCAGCAACCCCAAAATCCTGTACGCACCAGTGGGCTCTGAAGCGGACCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS CAA 72 bp AAGCCCGTGATGAACCAGGCCACCCAGTGCACGGCGTaGTTCAGGCCCATCGTCTTCATCACCTCCTTGAGC +
Preference number: 6 (lower is better)
Translates to: KPVMNQATQCTA*FRPIVFITSLS
Trigger: GCTCAAGGAGGTGATGAAGACGATGGGCCTGAACAACGCCGTGCACTGGGTGGCCTGGTTCATCACGGGCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS CAA 90 bp CAGGTGACTGGGTGCCCTCCTCAACAGTGGTGTTGGAACCTGAATTaGCACCTATCCCGGTGCTGTTGGCCAGGCCATTCAGGCTGCTGG +
Preference number: 6 (lower is better)
Translates to: QVTGCPPQQWCWNLN*HLSRCCWPGHSGCW
Trigger: CCAGCAGCCTGAATGGCCTGGCCAACAGCACCGGGATAGGTGCAAATTCAGGTTCCAACACCACTGTTGAGGAGGGCACCCAGTCACCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS CAA 90 bp ACGCGGTCCGCTTCAGAGCCCACTGGTGCGTACAGGATTTTGGGGTaGCTGGTCATGAGGTGCACTAGAAGGCCCAAGTTCCGCTGTTCC +
Preference number: 6 (lower is better)
Translates to: TRSASEPTGAYRILG*LVMRCTRRPKFRCS
Trigger: GGAACAGCGGAACTTGGGCCTTCTAGTGCACCTCATGACCAGCAACCCCAAAATCCTGTACGCACCAGTGGGCTCTGAAGCGGACCGCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS CAA 90 bp CACTCCTCCATGCTGTGTGACGTCAGCACCACCGAACGTCCCGTCTaGATGAGGTCCAGAATGAGGTTCCACAGGAAGCGCCGGGCCTTA +
Preference number: 6 (lower is better)
Translates to: HSSMLCDVSTTERPV*MRSRMRFHRKRRAL
Trigger: TAAGGCCCGGCGCTTCCTGTGGAACCTCATTCTGGACCTCATCAAGACGGGACGTTCGGTGGTGCTGACGTCACACAGCATGGAGGAGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS CAA 90 bp ACGGTGGAGGCGTTCCAGAAGCTGGGTGACCGTGGAGTTGGCATATaGCAGGAAGCCAAACTCATCACGCTGGCCATCAGGGCAAAGCGA +
Preference number: 6 (lower is better)
Translates to: TVEAFQKLGDRGVGI*QEAKLITLAIRAKR
Trigger: TCGCTTTGCCCTGATGGCCAGCGTGATGAGTTTGGCTTCCTGCAATATGCCAACTCCACGGTCACCCAGCTTCTGGAACGCCTCCACCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS CAA 90 bp TCCACTACACGGTGGAGGCGTTCCAGAAGCTGGGTGACCGTGGAGTaGGCATATTGCAGGAAGCCAAACTCATCACGCTGGCCATCAGGG +
Preference number: 6 (lower is better)
Translates to: STTRWRRSRSWVTVE*AYCRKPNSSRWPSG
Trigger: CCCTGATGGCCAGCGTGATGAGTTTGGCTTCCTGCAATATGCCAACTCCACGGTCACCCAGCTTCTGGAACGCCTCCACCGTGTAGTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS CAA 90 bp AGGATAACGCGGTCCGCTTCAGAGCCCACTGGTGCGTACAGGATTTaGGGGTTGCTGGTCATGAGGTGCACTAGAAGGCCCAAGTTCCGC +
Preference number: 6 (lower is better)
Translates to: RITRSASEPTGAYRI*GLLVMRCTRRPKFR
Trigger: GCGGAACTTGGGCCTTCTAGTGCACCTCATGACCAGCAACCCCAAAATCCTGTACGCACCAGTGGGCTCTGAAGCGGACCGCGTTATCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS CAA 90 bp AGGCTCTGCTGTACCTGGAGCAGGTCCTTGAGCACGCTGTGTCCATaGACAAAGGCCTCTCCCCCAGTTGTGCTCTCATCTCCAGTCAGC +
Preference number: 6 (lower is better)
Translates to: RLCCTWSRSLSTLCP*TKASPPVVLSSPVS
Trigger: GCTGACTGGAGATGAGAGCACAACTGGGGGAGAGGCCTTTGTCAATGGACACAGCGTGCTCAAGGACCTGCTCCAGGTACAGCAGAGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS TCA 72 bp TTTGCGGATCTCCTCCTGTGCCATGCTTTTGAGGCGTaGGTAGAACCAGAGGTGCTCCTCCACCGTGAGCCG +
Preference number: 6 (lower is better)
Translates to: FADLLLCHAFEA*VEPEVLLHREP
Trigger: CGGCTCACGGTGGAGGAGCACCTCTGGTTCTACTCACGCCTCAAAAGCATGGCACAGGAGGAGATCCGCAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS TCA 72 bp CCGTCTCTTTGCGGATCTCCTCCTGTGCCATGCTTTTaGGGCGTGAGTAGAACCAGAGGTGCTCCTCCACCG +
Preference number: 6 (lower is better)
Translates to: PSLCGSPPVPCF*GVSRTRGAPPP
Trigger: CGGTGGAGGAGCACCTCTGGTTCTACTCACGCCTCAAAAGCATGGCACAGGAGGAGATCCGCAAAGAGACGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS GCA 72 bp ACGGCAAGGAAGAGCCAGATAATGAGCACGTGGCTGTaGATGAGCACCTGGCCGTACTTGAGGATGGCGGTC +
Preference number: 6 (lower is better)
Translates to: TARKSQIMSTWL*MSTWPYLRMAV
Trigger: GACCGCCATCCTCAAGTACGGCCAGGTGCTCATGCACAGCCACGTGCTCATTATCTGGCTCTTCCTTGCCGT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS CCA 72 bp ACTGGGTCGAACAAATTGCCCTCCTCCACTACACGGTaGAGGCGTTCCAGAAGCTGGGTGACCGTGGAGTTG +
Preference number: 6 (lower is better)
Translates to: TGSNKLPSSTTR*RRSRSWVTVEL
Trigger: CAACTCCACGGTCACCCAGCTTCTGGAACGCCTCCACCGTGTAGTGGAGGAGGGCAATTTGTTCGACCCAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS CCA 72 bp CGAAGCCATAGAGGAAGTAGAAGCGACCACCGGTGTTaGGCCCTGGACGCCAATAAGCACGGCGGATCTCAT +
Preference number: 6 (lower is better)
Translates to: RSHRGSRSDHRC*ALDANKHGGSH
Trigger: ATGAGATCCGCCGTGCTTATTGGCGTCCAGGGCCCAACACCGGTGGTCGCTTCTACTTCCTCTATGGCTTCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS CCA 72 bp AGCCAGATAATGAGCACGTGGCTGTGCATGAGCACCTaGCCGTACTTGAGGATGGCGGTCAGAGCTGTCACG +
Preference number: 6 (lower is better)
Translates to: SQIMSTWLCMST*PYLRMAVRAVT
Trigger: CGTGACAGCTCTGACCGCCATCCTCAAGTACGGCCAGGTGCTCATGCACAGCCACGTGCTCATTATCTGGCT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS CCA 72 bp CTCCACCGTGAGCCGGTCAAAGAGCACGTTGTGCTGTaGGCACATGCCCAGGTTCTTGCGGATCTCATCCAT +
Preference number: 6 (lower is better)
Translates to: LHREPVKEHVVL*AHAQVLADLIH
Trigger: ATGGATGAGATCCGCAAGAACCTGGGCATGTGCCCACAGCACAACGTGCTCTTTGACCGGCTCACGGTGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS CCA 72 bp ATGTCAGTCAGGATGTCACCTGTGACCACTCTCATCTaGGGTGGGTGTCCACCCACACTGCTGGGGCATGAG +
Preference number: 6 (lower is better)
Translates to: MSVRMSPVTTLI*GGCPPTLLGHE
Trigger: CTCATGCCCCAGCAGTGTGGGTGGACACCCACCCCAGATGAGAGTGGTCACAGGTGACATCCTGACTGACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS CAA 72 bp CGGTGGAGGCGTTCCAGAAGCTGGGTGACCGTGGAGTaGGCATATTGCAGGAAGCCAAACTCATCACGCTGG +
Preference number: 6 (lower is better)
Translates to: RWRRSRSWVTVE*AYCRKPNSSRW
Trigger: CCAGCGTGATGAGTTTGGCTTCCTGCAATATGCCAACTCCACGGTCACCCAGCTTCTGGAACGCCTCCACCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS CAA 72 bp CGCTGTTCCTTGCTTGTAAAACCCAGGGAGCTCATGTaGCCTCTCCGAAGCGCTTCAGGCTCGATGGTGCGG +
Preference number: 6 (lower is better)
Translates to: RCSLLVKPRELM*PLRSASGSMVR
Trigger: CCGCACCATCGAGCCTGAAGCGCTTCGGAGAGGCAACATGAGCTCCCTGGGTTTTACAAGCAAGGAACAGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS CAA 72 bp ATGAGCACGTGGCTGTGCATGAGCACCTGGCCGTACTaGAGGATGGCGGTCAGAGCTGTCACGGAGATAGAC +
Preference number: 6 (lower is better)
Translates to: MSTWLCMSTWPY*RMAVRAVTEID
Trigger: GTCTATCTCCGTGACAGCTCTGACCGCCATCCTCAAGTACGGCCAGGTGCTCATGCACAGCCACGTGCTCAT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS CAA 90 bp CCCAAGTTCCGCTGTTCCTTGCTTGTAAAACCCAGGGAGCTCATGTaGCCTCTCCGAAGCGCTTCAGGCTCGATGGTGCGGTTGTTGCCA +
Preference number: 6 (lower is better)
Translates to: PKFRCSLLVKPRELM*PLRSASGSMVRLLP
Trigger: TGGCAACAACCGCACCATCGAGCCTGAAGCGCTTCGGAGAGGCAACATGAGCTCCCTGGGTTTTACAAGCAAGGAACAGCGGAACTTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS CAA 90 bp AGCCAGATAATGAGCACGTGGCTGTGCATGAGCACCTGGCCGTACTaGAGGATGGCGGTCAGAGCTGTCACGGAGATAGACAGCTGCACA +
Preference number: 6 (lower is better)
Translates to: SQIMSTWLCMSTWPY*RMAVRAVTEIDSCT
Trigger: TGTGCAGCTGTCTATCTCCGTGACAGCTCTGACCGCCATCCTCAAGTACGGCCAGGTGCTCATGCACAGCCACGTGCTCATTATCTGGCT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS TCA 72 bp CCTCCACTACACGGTGGAGGCGTTCCAGAAGCTGGGTaGCCGTGGAGTTGGCATATTGCAGGAAGCCAAACT +
Preference number: 6 (lower is better)
Translates to: PPLHGGGVPEAG*PWSWHIAGSQT
Trigger: AGTTTGGCTTCCTGCAATATGCCAACTCCACGGTCACCCAGCTTCTGGAACGCCTCCACCGTGTAGTGGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS TCA 72 bp CGAAGCCCTCGACTGTCATGGCCACCAGTCCACGTGTaGCAATGTCCCACTCGAACGGGGACTTCATCTTGT +
Preference number: 6 (lower is better)
Translates to: RSPRLSWPPVHV*QCPTRTGTSSC
Trigger: ACAAGATGAAGTCCCCGTTCGAGTGGGACATTGTCACACGTGGACTGGTGGCCATGACAGTCGAGGGCTTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS GCA 72 bp CGTTCCAGAAGCTGGGTGACCGTGGAGTTGGCATATTaGAGGAAGCCAAACTCATCACGCTGGCCATCAGGG +
Preference number: 6 (lower is better)
Translates to: RSRSWVTVELAY*RKPNSSRWPSG
Trigger: CCCTGATGGCCAGCGTGATGAGTTTGGCTTCCTGCAATATGCCAACTCCACGGTCACCCAGCTTCTGGAACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS GCA 72 bp AGCAGAGGATTGCTACCCAGGCGGCTCCAGGGCTCCTaGTTCCTAAGGAAACCCAACTTTCCATCCAGGTCA +
Preference number: 6 (lower is better)
Translates to: SRGLLPRRLQGS*FLRKPNFPSRS
Trigger: TGACCTGGATGGAAAGTTGGGTTTCCTTAGGAAGCAGGAGCCCTGGAGCCGCCTGGGTAGCAATCCTCTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS GCA 72 bp AGCAGCAGGGCAAGGGCTGATAGGACATCCACATCCTaGAGAAGTTTCTGGGCATCCAGCAGGTCCCCTAAG +
Preference number: 6 (lower is better)
Translates to: SSRARADRTSTS*RSFWASSRSPK
Trigger: CTTAGGGGACCTGCTGGATGCCCAGAAACTTCTGCAGGATGTGGATGTCCTATCAGCCCTTGCCCTGCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS GCA 72 bp TCATGTTGCCTCTCCGAAGCGCTTCAGGCTCGATGGTaGGGTTGTTGCCACACAAGATGGGTTGCAAGCCAG +
Preference number: 6 (lower is better)
Translates to: SCCLSEALQARW*GCCHTRWVASQ
Trigger: CTGGCTTGCAACCCATCTTGTGTGGCAACAACCGCACCATCGAGCCTGAAGCGCTTCGGAGAGGCAACATGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS GCA 72 bp CTTGAGGATAACGCGGTCCGCTTCAGAGCCCACTGGTaGGTACAGGATTTTGGGGTTGCTGGTCATGAGGTG +
Preference number: 6 (lower is better)
Translates to: LEDNAVRFRAHW*VQDFGVAGHEV
Trigger: CACCTCATGACCAGCAACCCCAAAATCCTGTACGCACCAGTGGGCTCTGAAGCGGACCGCGTTATCCTCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS CCA 72 bp GAGTTGGCATATTGCAGGAAGCCAAACTCATCACGCTaGCCATCAGGGCAAAGCGACTGCATGACGGGCAGG +
Preference number: 6 (lower is better)
Translates to: ELAYCRKPNSSR*PSGQSDCMTGR
Trigger: CCTGCCCGTCATGCAGTCGCTTTGCCCTGATGGCCAGCGTGATGAGTTTGGCTTCCTGCAATATGCCAACTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS CCA 72 bp AGGCATGGTAAGAATCCGGCCCAGTTCCCCAGAACCTaGAGCACATGTGAGCTGTTCCAAAAGGGCAGGAGC +
Preference number: 6 (lower is better)
Translates to: RHGKNPAQFPRT*STCELFQKGRS
Trigger: GCTCCTGCCCTTTTGGAACAGCTCACATGTGCTCCAGGTTCTGGGGAACTGGGCCGGATTCTTACCATGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS CCA 72 bp TGCCTTGAGGATAACGCGGTCCGCTTCAGAGCCCACTaGTGCGTACAGGATTTTGGGGTTGCTGGTCATGAG +
Preference number: 6 (lower is better)
Translates to: CLEDNAVRFRAH*CVQDFGVAGHE
Trigger: CTCATGACCAGCAACCCCAAAATCCTGTACGCACCAGTGGGCTCTGAAGCGGACCGCGTTATCCTCAAGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS CCA 72 bp GACAGCAAGGAGCAGATTGAAGTCATCTCCTTCCACTaGGGACTGGCTGAACGTGTGCCACTGGATGCCCAC +
Preference number: 6 (lower is better)
Translates to: DSKEQIEVISFH*GLAERVPLDAH
Trigger: GTGGGCATCCAGTGGCACACGTTCAGCCAGTCCCCAGTGGAAGGAGATGACTTCAATCTGCTCCTTGCTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS CAA 72 bp GGGTGCCCTCCTCAACAGTGGTGTTGGAACCTGAATTaGCACCTATCCCGGTGCTGTTGGCCAGGCCATTCA +
Preference number: 6 (lower is better)
Translates to: GCPPQQWCWNLN*HLSRCCWPGHS
Trigger: TGAATGGCCTGGCCAACAGCACCGGGATAGGTGCAAATTCAGGTTCCAACACCACTGTTGAGGAGGGCACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS CAA 72 bp GCCAGGGCCTCCATCTCTGCCTCTTGTAAGCTGACATaGTCTGGGTCCTGCAAGTTGTCAAAGAGGGGACGG +
Preference number: 6 (lower is better)
Translates to: ARASISASCKLT*SGSCKLSKRGR
Trigger: CCGTCCCCTCTTTGACAACTTGCAGGACCCAGACAATGTCAGCTTACAAGAGGCAGAGATGGAGGCCCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS CAA 72 bp ATGCTGTGTGACGTCAGCACCACCGAACGTCCCGTCTaGATGAGGTCCAGAATGAGGTTCCACAGGAAGCGC +
Preference number: 6 (lower is better)
Translates to: MLCDVSTTERPV*MRSRMRFHRKR
Trigger: GCGCTTCCTGTGGAACCTCATTCTGGACCTCATCAAGACGGGACGTTCGGTGGTGCTGACGTCACACAGCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS TCA 72 bp CCACTGGTGCGTACAGGATTTTGGGGTTGCTGGTCATaGGGTGCACTAGAAGGCCCAAGTTCCGCTGTTCCT +
Preference number: 6 (lower is better)
Translates to: PLVRTGFWGCWS*GALEGPSSAVP
Trigger: AGGAACAGCGGAACTTGGGCCTTCTAGTGCACCTCATGACCAGCAACCCCAAAATCCTGTACGCACCAGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS TCA 72 bp TGGACATCAGGGACGCAATGCACTTCTCGAAGGCAGTaGTCTTGTCATGGGCTACCTCCTCGCGGATCGCTA +
Preference number: 6 (lower is better)
Translates to: WTSGTQCTSRRQ*SCHGLPPRGSL
Trigger: TAGCGATCCGCGAGGAGGTAGCCCATGACAAGATCACTGCCTTCGAGAAGTGCATTGCGTCCCTGATGTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS GCA 72 bp CAGCCACAGGCTGCGTTGTCTATTGTGTCAAGCTGTTaGAGGAGGGCTGTGCCATTAGGCAGTGAGAAGTCC +
Preference number: 6 (lower is better)
Translates to: QPQAALSIVSSC*RRAVPLGSEKS
Trigger: GGACTTCTCACTGCCTAATGGCACAGCCCTCCTGCAACAGCTTGACACAATAGACAACGCAGCCTGTGGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS GCA 72 bp GGGTGTAGCAGGGGTATGGGAACATCTGCACGTAGTTaGCAGGTTCGACCACGTCATGCCCCACAAATGTGT +
Preference number: 6 (lower is better)
Translates to: GCSRGMGTSARS*QVRPRHAPQMC
Trigger: ACACATTTGTGGGGCATGACGTGGTCGAACCTGGCAACTACGTGCAGATGTTCCCATACCCCTGCTACACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS GCA 72 bp GGACTGGCTGAACGTGTGCCACTGGATGCCCACTCCTaGCACTTCATACAGTGCAAAGTACTTGGAACCCAG +
Preference number: 6 (lower is better)
Translates to: GLAERVPLDAHS*HFIQCKVLGTQ
Trigger: CTGGGTTCCAAGTACTTTGCACTGTATGAAGTGGCAGGAGTGGGCATCCAGTGGCACACGTTCAGCCAGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS GCA 72 bp ACCGAAAGCTTGCGCTTCATGCCTCCAGACAACGTCTaGACCAGTGAGTGCCGCTTGTTAGAGAGTTCCAGG +
Preference number: 6 (lower is better)
Translates to: TESLRFMPPDNV*TSECRLLESSR
Trigger: CCTGGAACTCTCTAACAAGCGGCACTCACTGGTGCAGACGTTGTCTGGAGGCATGAAGCGCAAGCTTTCGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS CCA 72 bp TCTGCATCAGGAAACGCCAAAGCTCTCTCTGGTCCCTaGCCACCGAGTCCAGAGAGAAGGATGAAACTGCAG +
Preference number: 6 (lower is better)
Translates to: SASGNAKALSGP*PPSPERRMKLQ
Trigger: CTGCAGTTTCATCCTTCTCTCTGGACTCGGTGGCCAGGGACCAGAGAGAGCTTTGGCGTTTCCTGATGCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS CCA 72 bp GACAAACAGGAAGTCGTCACGGGTGTAGCAGGGGTATaGGAACATCTGCACGTAGTTGCCAGGTTCGACCAC +
Preference number: 6 (lower is better)
Translates to: DKQEVVTGVAGV*EHLHVVARFDH
Trigger: GTGGTCGAACCTGGCAACTACGTGCAGATGTTCCCATACCCCTGCTACACCCGTGACGACTTCCTGTTTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS CAA 72 bp GCTTCAGAGCCCACTGGTGCGTACAGGATTTTGGGGTaGCTGGTCATGAGGTGCACTAGAAGGCCCAAGTTC +
Preference number: 6 (lower is better)
Translates to: ASEPTGAYRILG*LVMRCTRRPKF
Trigger: GAACTTGGGCCTTCTAGTGCACCTCATGACCAGCAACCCCAAAATCCTGTACGCACCAGTGGGCTCTGAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS CAA 72 bp TTGCCAGGTTCGACCACGTCATGCCCCACAAATGTGTaGATGATGGCGCGCTCCATCATGTCCTGGATCCAG +
Preference number: 6 (lower is better)
Translates to: LPGSTTSCPTNV*MMARSIMSWIQ
Trigger: CTGGATCCAGGACATGATGGAGCGCGCCATCATCAACACATTTGTGGGGCATGACGTGGTCGAACCTGGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS CAA 72 bp GGGTTGCACCCGCTGACGAACTGCAGGTGTTTGGCCTaGGTGGATTTCTCTGCCACAAGGAAGACCACAAAG +
Preference number: 6 (lower is better)
Translates to: GLHPLTNCRCLA*VDFSATRKTTK
Trigger: CTTTGTGGTCTTCCTTGTGGCAGAGAAATCCACCAAGGCCAAACACCTGCAGTTCGTCAGCGGGTGCAACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS CAA 72 bp TGTACCTGGAGCAGGTCCTTGAGCACGCTGTGTCCATaGACAAAGGCCTCTCCCCCAGTTGTGCTCTCATCT +
Preference number: 6 (lower is better)
Translates to: CTWSRSLSTLCP*TKASPPVVLSS
Trigger: AGATGAGAGCACAACTGGGGGAGAGGCCTTTGTCAATGGACACAGCGTGCTCAAGGACCTGCTCCAGGTACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS CAA 90 bp TTGCTGGTCATGAGGTGCACTAGAAGGCCCAAGTTCCGCTGTTCCTaGCTTGTAAAACCCAGGGAGCTCATGTTGCCTCTCCGAAGCGCT +
Preference number: 6 (lower is better)
Translates to: LLVMRCTRRPKFRCS*LVKPRELMLPLRSA
Trigger: AGCGCTTCGGAGAGGCAACATGAGCTCCCTGGGTTTTACAAGCAAGGAACAGCGGAACTTGGGCCTTCTAGTGCACCTCATGACCAGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS CAA 90 bp TCCACACTCACCTTGGACATGAACTGGATCCAGCCACAGGCTGCGTaGTCTATTGTGTCAAGCTGTTGCAGGAGGGCTGTGCCATTAGGC +
Preference number: 6 (lower is better)
Translates to: STLTLDMNWIQPQAA*SIVSSCCRRAVPLG
Trigger: GCCTAATGGCACAGCCCTCCTGCAACAGCTTGACACAATAGACAACGCAGCCTGTGGCTGGATCCAGTTCATGTCCAAGGTGAGTGTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS TCA 72 bp CTTGCGCTTCATGCCTCCAGACAACGTCTGCACCAGTaGGTGCCGCTTGTTAGAGAGTTCCAGGTCCTCAAT +
Preference number: 6 (lower is better)
Translates to: LALHASRQRLHQ*VPLVREFQVLN
Trigger: ATTGAGGACCTGGAACTCTCTAACAAGCGGCACTCACTGGTGCAGACGTTGTCTGGAGGCATGAAGCGCAAG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS TCA 72 bp CCGGGACTCCTTCACATCAGCCTCGCTGTTCTCCAGTaGCTGATCTTCTTCAGACACCTTGAGGAACACCTC +
Preference number: 6 (lower is better)
Translates to: PGLLHISLAVLQ*LIFFRHLEEHL
Trigger: GAGGTGTTCCTCAAGGTGTCTGAAGAAGATCAGTCACTGGAGAACAGCGAGGCTGATGTGAAGGAGTCCCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS GCA 72 bp GGTGCGTACAGGATTTTGGGGTTGCTGGTCATGAGGTaGACTAGAAGGCCCAAGTTCCGCTGTTCCTTGCTT +
Preference number: 6 (lower is better)
Translates to: GAYRILGLLVMR*TRRPKFRCSLL
Trigger: AAGCAAGGAACAGCGGAACTTGGGCCTTCTAGTGCACCTCATGACCAGCAACCCCAAAATCCTGTACGCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS GCA 72 bp GTGTGTAACGTTGCCCACAAAGGCAAAGGTCTCATTTaGCTTGAGGATAACGCGGTCCGCTTCAGAGCCCAC +
Preference number: 6 (lower is better)
Translates to: VCNVAHKGKGLI*LEDNAVRFRAH
Trigger: GTGGGCTCTGAAGCGGACCGCGTTATCCTCAAGGCAAATGAGACCTTTGCCTTTGTGGGCAACGTTACACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS GCA 72 bp ACTCACCTTGGACATGAACTGGATCCAGCCACAGGCTaGGTTGTCTATTGTGTCAAGCTGTTGCAGGAGGGC +
Preference number: 6 (lower is better)
Translates to: THLGHELDPATG*VVYCVKLLQEG
Trigger: GCCCTCCTGCAACAGCTTGACACAATAGACAACGCAGCCTGTGGCTGGATCCAGTTCATGTCCAAGGTGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS GCA 72 bp GTGCCACTGGATGCCCACTCCTGCCACTTCATACAGTaGAAAGTACTTGGAACCCAGGCCAAAGGCTGTTGT +
Preference number: 6 (lower is better)
Translates to: VPLDAHSCHFIQ*KVLGTQAKGCC
Trigger: ACAACAGCCTTTGGCCTGGGTTCCAAGTACTTTGCACTGTATGAAGTGGCAGGAGTGGGCATCCAGTGGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS GCA 72 bp CGCTTCATGCCTCCAGACAACGTCTGCACCAGTGAGTaGCGCTTGTTAGAGAGTTCCAGGTCCTCAATCATC +
Preference number: 6 (lower is better)
Translates to: RFMPPDNVCTSE*RLLESSRSSII
Trigger: GATGATTGAGGACCTGGAACTCTCTAACAAGCGGCACTCACTGGTGCAGACGTTGTCTGGAGGCATGAAGCG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS GCA 72 bp ACACCTCCTCCAGAGTTGTGTCCATCAGCCCAAAACTaGTCAGATGGAGCGCATCCAGGCTGTGTTCCAGTT +
Preference number: 6 (lower is better)
Translates to: TPPPELCPSAQN*SDGAHPGCVPV
Trigger: AACTGGAACACAGCCTGGATGCGCTCCATCTGAGCAGTTTTGGGCTGATGGACACAACTCTGGAGGAGGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS CCA 72 bp ATAGAGGAAGTAGAAGCGACCACCGGTGTTGGGCCCTaGACGCCAATAAGCACGGCGGATCTCATTGGTTTT +
Preference number: 6 (lower is better)
Translates to: IEEVEATTGVGP*TPISTADLIGF
Trigger: AAAACCAATGAGATCCGCCGTGCTTATTGGCGTCCAGGGCCCAACACCGGTGGTCGCTTCTACTTCCTCTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS CAA 72 bp GTAACGTTGCCCACAAAGGCAAAGGTCTCATTTGCCTaGAGGATAACGCGGTCCGCTTCAGAGCCCACTGGT +
Preference number: 6 (lower is better)
Translates to: VTLPTKAKVSFA*RITRSASEPTG
Trigger: ACCAGTGGGCTCTGAAGCGGACCGCGTTATCCTCAAGGCAAATGAGACCTTTGCCTTTGTGGGCAACGTTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS CAA 72 bp ACCTTGGACATGAACTGGATCCAGCCACAGGCTGCGTaGTCTATTGTGTCAAGCTGTTGCAGGAGGGCTGTG +
Preference number: 6 (lower is better)
Translates to: TLDMNWIQPQAA*SIVSSCCRRAV
Trigger: CACAGCCCTCCTGCAACAGCTTGACACAATAGACAACGCAGCCTGTGGCTGGATCCAGTTCATGTCCAAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS CAA 72 bp ACGGCGTTGTTCAGGCCCATCGTCTTCATCACCTCCTaGAGCCTGTGCTCTTTCTCTGCCACAATATGCTGG +
Preference number: 6 (lower is better)
Translates to: TALFRPIVFITS*SLCSFSATICW
Trigger: CCAGCATATTGTGGCAGAGAAAGAGCACAGGCTCAAGGAGGTGATGAAGACGATGGGCCTGAACAACGCCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS CAA 72 bp ATCAGGGACGCAATGCACTTCTCGAAGGCAGTGATCTaGTCATGGGCTACCTCCTCGCGGATCGCTACATAC +
Preference number: 6 (lower is better)
Translates to: IRDAMHFSKAVI*SWATSSRIATY
Trigger: GTATGTAGCGATCCGCGAGGAGGTAGCCCATGACAAGATCACTGCCTTCGAGAAGTGCATTGCGTCCCTGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS CAA 72 bp TGTCTTTCCTTGAGCATGGCCTCTGGGAAGTTCCTGTaGAAGAACCGCACCACGTCCTTCACGTTCTGGCTG +
Preference number: 6 (lower is better)
Translates to: CLSLSMASGKFL*KNRTTSFTFWL
Trigger: CAGCCAGAACGTGAAGGACGTGGTGCGGTTCTTCAACAGGAACTTCCCAGAGGCCATGCTCAAGGAAAGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS TCA 72 bp GACTCCTTCACATCAGCCTCGCTGTTCTCCAGTGACTaGTCTTCTTCAGACACCTTGAGGAACACCTCCTCC +
Preference number: 6 (lower is better)
Translates to: DSFTSASLFSSD*SSSDTLRNTSS
Trigger: GGAGGAGGTGTTCCTCAAGGTGTCTGAAGAAGATCAGTCACTGGAGAACAGCGAGGCTGATGTGAAGGAGTC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS TCA 72 bp GGGACCCGGGCACCAAAGGATGCTGGGATAGACTTCTaGACATTACCAAAGGTGATGGCTCCATATCGGTGT +
Preference number: 6 (lower is better)
Translates to: GTRAPKDAGIDF*TLPKVMAPYRC
Trigger: ACACCGATATGGAGCCATCACCTTTGGTAATGTTCAGAAGTCTATCCCAGCATCCTTTGGTGCCCGGGTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS GCA 72 bp TCAGCTACATACTGCTGTAACCACTGCAGATGCTGCTaGAGCCTGCCTTGCTCCAAGAAGCTTCGGATCTCT +
Preference number: 6 (lower is better)
Translates to: SATYCCNHCRCC*SLPCSKKLRIS
Trigger: AGAGATCCGAAGCTTCTTGGAGCAAGGCAGGCTGCAGCAGCATCTGCAGTGGTTACAGCAGTATGTAGCTGA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS GCA 72 bp AGATCAGCTACATACTGCTGTAACCACTGCAGATGCTaGTGCAGCCTGCCTTGCTCCAAGAAGCTTCGGATC +
Preference number: 6 (lower is better)
Translates to: RSATYCCNHCRC*CSLPCSKKLRI
Trigger: GATCCGAAGCTTCTTGGAGCAAGGCAGGCTGCAGCAGCATCTGCAGTGGTTACAGCAGTATGTAGCTGATCT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS GCA 72 bp CTTCCGCACCATAGGAGGGACCCGGGCACCAAAGGATaGTGGGATAGACTTCTGAACATTACCAAAGGTGAT +
Preference number: 6 (lower is better)
Translates to: LPHHRRDPGTKG*WDRLLNITKGD
Trigger: ATCACCTTTGGTAATGTTCAGAAGTCTATCCCAGCATCCTTTGGTGCCCGGGTCCCTCCTATGGTGCGGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS CCA 72 bp CGGTCAGAGGTGAAGAGCAGGTACTCAGAAACATTGTaGCCAGTGATGTCAGTCAGGATGTCACCTGTGACC +
Preference number: 6 (lower is better)
Translates to: RSEVKSRYSETL*PVMSVRMSPVT
Trigger: GGTCACAGGTGACATCCTGACTGACATCACTGGCCACAATGTTTCTGAGTACCTGCTCTTCACCTCTGACCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS CAA 72 bp ATGAGGTGCACTAGAAGGCCCAAGTTCCGCTGTTCCTaGCTTGTAAAACCCAGGGAGCTCATGTTGCCTCTC +
Preference number: 6 (lower is better)
Translates to: MRCTRRPKFRCS*LVKPRELMLPL
Trigger: GAGAGGCAACATGAGCTCCCTGGGTTTTACAAGCAAGGAACAGCGGAACTTGGGCCTTCTAGTGCACCTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS CAA 72 bp ACAGTGCAAAGTACTTGGAACCCAGGCCAAAGGCTGTaGTGGACATCAGGGACGCAATGCACTTCTCGAAGG +
Preference number: 6 (lower is better)
Translates to: TVQSTWNPGQRL*WTSGTQCTSRR
Trigger: CCTTCGAGAAGTGCATTGCGTCCCTGATGTCCACAACAGCCTTTGGCCTGGGTTCCAAGTACTTTGCACTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS CAA 72 bp ATGCCCACTCCTGCCACTTCATACAGTGCAAAGTACTaGGAACCCAGGCCAAAGGCTGTTGTGGACATCAGG +
Preference number: 6 (lower is better)
Translates to: MPTPATSYSAKY*EPRPKAVVDIR
Trigger: CCTGATGTCCACAACAGCCTTTGGCCTGGGTTCCAAGTACTTTGCACTGTATGAAGTGGCAGGAGTGGGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS CAA 72 bp GAGAGTTCCAGGTCCTCAATCATCTTGTCCGTCTCTTaGCGGATCTCCTCCTGTGCCATGCTTTTGAGGCGT +
Preference number: 6 (lower is better)
Translates to: ESSRSSIILSVS*RISSCAMLLRR
Trigger: ACGCCTCAAAAGCATGGCACAGGAGGAGATCCGCAAAGAGACGGACAAGATGATTGAGGACCTGGAACTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS CAA 72 bp ATGCCTCCAGACAACGTCTGCACCAGTGAGTGCCGCTaGTTAGAGAGTTCCAGGTCCTCAATCATCTTGTCC +
Preference number: 6 (lower is better)
Translates to: MPPDNVCTSECR*LESSRSSIILS
Trigger: GGACAAGATGATTGAGGACCTGGAACTCTCTAACAAGCGGCACTCACTGGTGCAGACGTTGTCTGGAGGCAT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS CAA 90 bp TTGCGCTTCATGCCTCCAGACAACGTCTGCACCAGTGAGTGCCGCTaGTTAGAGAGTTCCAGGTCCTCAATCATCTTGTCCGTCTCTTTG +
Preference number: 6 (lower is better)
Translates to: LRFMPPDNVCTSECR*LESSRSSIILSVSL
Trigger: CAAAGAGACGGACAAGATGATTGAGGACCTGGAACTCTCTAACAAGCGGCACTCACTGGTGCAGACGTTGTCTGGAGGCATGAAGCGCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS CAA 90 bp CGAGACTTGTACACCTTGGTCAGGTTCTCAATCTTGACCATGTCATaGTCAGCATCGCCACGGAGCACTCTCTGTCGCTCACTAGCCACA +
Preference number: 6 (lower is better)
Translates to: RDLYTLVRFSILTMS*SASPRSTLCRSLAT
Trigger: TGTGGCTAGTGAGCGACAGAGAGTGCTCCGTGGCGATGCTGACAATGACATGGTCAAGATTGAGAACCTGACCAAGGTGTACAAGTCTCG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS CAA 90 bp TTCGTATGGTGTCTTTCCTTGAGCATGGCCTCTGGGAAGTTCCTGTaGAAGAACCGCACCACGTCCTTCACGTTCTGGCTGCTTTTGGTC +
Preference number: 6 (lower is better)
Translates to: FVWCLSLSMASGKFL*KNRTTSFTFWLLLV
Trigger: GACCAAAAGCAGCCAGAACGTGAAGGACGTGGTGCGGTTCTTCAACAGGAACTTCCCAGAGGCCATGCTCAAGGAAAGACACCATACGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS CAA 90 bp TGTAGTCGGAAACGGTCAGAGGTGAAGAGCAGGTACTCAGAAACATaGTGGCCAGTGATGTCAGTCAGGATGTCACCTGTGACCACTCTC +
Preference number: 6 (lower is better)
Translates to: CSRKRSEVKSRYSET*WPVMSVRMSPVTTL
Trigger: GAGAGTGGTCACAGGTGACATCCTGACTGACATCACTGGCCACAATGTTTCTGAGTACCTGCTCTTCACCTCTGACCGTTTCCGACTACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS TCA 72 bp AACGTAGCTCAGGAAGTAGATGATACCGCCACAGGCTaGGGCCAACTTAGCCTTAGAGTACAGCACAGACAC +
Preference number: 6 (lower is better)
Translates to: NVAQEVDDTATG*GQLSLRVQHRH
Trigger: GTGTCTGTGCTGTACTCTAAGGCTAAGTTGGCCTCAGCCTGTGGCGGTATCATCTACTTCCTGAGCTACGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS TCA 72 bp TCCGAGACTTGTACACCTTGGTCAGGTTCTCAATCTTaGCCATGTCATTGTCAGCATCGCCACGGAGCACTC +
Preference number: 6 (lower is better)
Translates to: SETCTPWSGSQS*PCHCQHRHGAL
Trigger: GAGTGCTCCGTGGCGATGCTGACAATGACATGGTCAAGATTGAGAACCTGACCAAGGTGTACAAGTCTCGGA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS TCA 72 bp CATCTTGCTGAACACCTGAGCCAGCGAGATGTGCTCTaGCTTGAGCTGATACTGCACCTTCGTATGGTGTCT +
Preference number: 6 (lower is better)
Translates to: HLAEHLSQRDVL*LELILHLRMVS
Trigger: AGACACCATACGAAGGTGCAGTATCAGCTCAAGTCAGAGCACATCTCGCTGGCTCAGGTGTTCAGCAAGATG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS GCA 72 bp CGTCTTCATCACCTCCTTGAGCCTGTGCTCTTTCTCTaGCACAATATGCTGGATGGTCATGGCCACAGAGTA +
Preference number: 6 (lower is better)
Translates to: RLHHLLEPVLFL*HNMLDGHGHRV
Trigger: TACTCTGTGGCCATGACCATCCAGCATATTGTGGCAGAGAAAGAGCACAGGCTCAAGGAGGTGATGAAGACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS CCA 72 bp CCCTTGAAGATGTCCACACTCACCTTGGACATGAACTaGATCCAGCCACAGGCTGCGTTGTCTATTGTGTCA +
Preference number: 6 (lower is better)
Translates to: PLKMSTLTLDMN*IQPQAALSIVS
Trigger: TGACACAATAGACAACGCAGCCTGTGGCTGGATCCAGTTCATGTCCAAGGTGAGTGTGGACATCTTCAAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS CCA 72 bp TGTGCTCTTTCTCTGCCACAATATGCTGGATGGTCATaGCCACAGAGTAGACCCAGGAGATCACCATGCACA +
Preference number: 6 (lower is better)
Translates to: CALSLPQYAGWS*PQSRPRRSPCT
Trigger: TGTGCATGGTGATCTCCTGGGTCTACTCTGTGGCCATGACCATCCAGCATATTGTGGCAGAGAAAGAGCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS CAA 72 bp TACACCTTGGTCAGGTTCTCAATCTTGACCATGTCATaGTCAGCATCGCCACGGAGCACTCTCTGTCGCTCA +
Preference number: 6 (lower is better)
Translates to: YTLVRFSILTMS*SASPRSTLCRS
Trigger: TGAGCGACAGAGAGTGCTCCGTGGCGATGCTGACAATGACATGGTCAAGATTGAGAACCTGACCAAGGTGTA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS CCA 72 bp GGCCACAGAGTAGACCCAGGAGATCACCATGCACAATaGCATCATGTGTTCAATGACAAACAGGAAGTCGTC +
Preference number: 6 (lower is better)
Translates to: GHRVDPGDHHAQ*HHVFNDKQEVV
Trigger: GACGACTTCCTGTTTGTCATTGAACACATGATGCCATTGTGCATGGTGATCTCCTGGGTCTACTCTGTGGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS CAA 72 bp AAACGGTCAGAGGTGAAGAGCAGGTACTCAGAAACATaGTGGCCAGTGATGTCAGTCAGGATGTCACCTGTG +
Preference number: 6 (lower is better)
Translates to: KRSEVKSRYSET*WPVMSVRMSPV
Trigger: CACAGGTGACATCCTGACTGACATCACTGGCCACAATGTTTCTGAGTACCTGCTCTTCACCTCTGACCGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS TCA 72 bp AGCACGGCGGATCTCATTGGTTTTCTCAGTGAAGCTTaGATTCTGGCGAATCTTGTAATGTACATGTGGAGG +
Preference number: 6 (lower is better)
Translates to: STADLIGFLSEA*ILANLVMYMWR
Trigger: CCTCCACATGTACATTACAAGATTCGCCAGAATTCAAGCTTCACTGAGAAAACCAATGAGATCCGCCGTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4
CDS TCA 72 bp GCCAATAAGCACGGCGGATCTCATTGGTTTTCTCAGTaGAGCTTGAATTCTGGCGAATCTTGTAATGTACAT +
Preference number: 6 (lower is better)
Translates to: ANKHGGSHWFSQ*SLNSGESCNVH
Trigger: ATGTACATTACAAGATTCGCCAGAATTCAAGCTTCACTGAGAAAACCAATGAGATCCGCCGTGCTTATTGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102919.4