Pregenerated sensors for ABCA17 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000035435Ensembl transcript IDs: ENSMUST00000039324.7, ENSMUST00000121226.8, ENSMUST00000234232.2
Found 78 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR GCA 90 bp | TTTATTAAATGCCACATTCTCCAAAGGCAACCCCTTGGACCCCCACTGGAAGGCGGTAAAGAAAGGCTGTaGACCAGCCTTCTATCTCCT | + |
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Preference number: 4 (lower is better) Translates to: FIKCHILQRQPLGPPLEGGKERL*TSLLSP Trigger: AGGAGATAGAAGGCTGGTGCACAGCCTTTCTTTACC...GCCTTCCAGTGGGGGTCCAAGGGGTTGCCTTTGGAGAATGTGGCATTTAATAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000234232.2 |
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| CDS-3UTR TCA 90 bp | TTTATTAAATGCCACATTCTCCAAAGGCAACCCCTTGGACCCCCACTGGAAGGCCGGGTAGTTGGTAGATaGCTTCTTTCTTGGCATACT | + |
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Preference number: 4 (lower is better) Translates to: FIKCHILQRQPLGPPLEGRVVGR*LLSWHT Trigger: AGTATGCCAAGAAAGAAGTCATCTACCAACTACCCG...GCCTTCCAGTGGGGGTCCAAGGGGTTGCCTTTGGAGAATGTGGCATTTAATAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000234232.2 |
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| CDS-3UTR TCA 90 bp | TTTATTAAATGCCACATTCTCCAAAGGCAACCCCTTGGACCCCCACTGGAAGGCTCCGCCTCTTTAAGATaGAATTCTTCCAGAGAAGGA | + |
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Preference number: 4 (lower is better) Translates to: FIKCHILQRQPLGPPLEGSASLR*NSSREG Trigger: TCCTTCTCTGGAAGAATTTCATCTTAAAGAGGCGGA...GCCTTCCAGTGGGGGTCCAAGGGGTTGCCTTTGGAGAATGTGGCATTTAATAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000234232.2 |
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| CDS-3UTR TCA 90 bp | CTTACACTGAAATGTACGTGTTTTATTAAATGCCACATTCTCCAAAGGCAACCCTCCTCCATCCGCATATaGAAATTCCCGGGGCGCTTG | + |
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Preference number: 4 (lower is better) Translates to: LTLKCTCFIKCHILQRQPSSIRI*KFPGRL Trigger: CAAGCGCCCCGGGAATTTTCATATGCGGATGGAGGA...GGGTTGCCTTTGGAGAATGTGGCATTTAATAAAACACGTACATTTCAGTGTAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000234232.2 |
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| CDS-3UTR TCA 90 bp | CTTACACTGAAATGTACGTGTTTTATTAAATGCCACATTCTCCAAAGGCAACCCATACTGGCAGTAAACTaGCATCAACTGCCGGGTAGT | + |
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Preference number: 4 (lower is better) Translates to: LTLKCTCFIKCHILQRQPILAVN*HQLPGS Trigger: ACTACCCGGCAGTTGATGTCAGTTTACTGCCAGTAT...GGGTTGCCTTTGGAGAATGTGGCATTTAATAAAACACGTACATTTCAGTGTAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234232.2 |
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| CDS-3UTR TCA 90 bp | CTTACACTGAAATGTACGTGTTTTATTAAATGCCACATTCTCCAAAGGCAACCCGCTCCACCACTTCAGTaGCAGCTTTTAAGGTTTCAC | + |
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Preference number: 4 (lower is better) Translates to: LTLKCTCFIKCHILQRQPAPPLQ*QLLRFH Trigger: GTGAAACCTTAAAAGCTGTCACTGAAGTGGTGGAGC...GGGTTGCCTTTGGAGAATGTGGCATTTAATAAAACACGTACATTTCAGTGTAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000234232.2 |
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| CDS-3UTR TCA 90 bp | CTTACACTGAAATGTACGTGTTTTATTAAATGCCACATTCTCCAAAGGCAACCCCTATTGAAGTCATGGTaGAAAATAATTCCCACCAGT | + |
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Preference number: 4 (lower is better) Translates to: LTLKCTCFIKCHILQRQPLLKSW*KIIPTS Trigger: ACTGGTGGGAATTATTTTTCACCATGACTTCAATAG...GGGTTGCCTTTGGAGAATGTGGCATTTAATAAAACACGTACATTTCAGTGTAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000234232.2 |
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| CDS-3UTR CCA 90 bp | CTTACACTGAAATGTACGTGTTTTATTAAATGCCACATTCTCCAAAGGCAACCCTTAAGGTTTCACTTTTaGAAGGGATATAAGCCAACT | + |
|
Preference number: 4 (lower is better) Translates to: LTLKCTCFIKCHILQRQPLRFHF*KGYKPT Trigger: AGTTGGCTTATATCCCTTCCAAAAGTGAAACCTTAA...GGGTTGCCTTTGGAGAATGTGGCATTTAATAAAACACGTACATTTCAGTGTAAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000234232.2 |
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| CDS TCA 90 bp | CTGGAGAAGGTCCCAGATGGCCCTCCTGGAGGGGGAGTCCAGGCCTaGGGTGGGCTCATCCAAAATCAGCACCTTAGAGCCCGCTATGAG | + |
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Preference number: 5 (lower is better) Translates to: LEKVPDGPPGGGVQA*GGLIQNQHLRARYE Trigger: CTCATAGCGGGCTCTAAGGTGCTGATTTTGGATGAGCCCACCTCAGGCCTGGACTCCCCCTCCAGGAGGGCCATCTGGGACCTTCTCCAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039324.7 ENSMUST00000121226.8 |
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| CDS TCA 90 bp | AGTCATATAGTATCCTGCACCGTATTTCTGCTTGAGGAACGATGGTaGCCCGCAGCACTGGAGCTCCCCCTTGGCCAAGATGGCGATGCG | + |
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Preference number: 5 (lower is better) Translates to: SHIVSCTVFLLEERW*PAALELPLGQDGDA Trigger: CGCATCGCCATCTTGGCCAAGGGGGAGCTCCAGTGCTGCGGGTCACCATCGTTCCTCAAGCAGAAATACGGTGCAGGATACTATATGACT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039324.7 ENSMUST00000121226.8 |
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| CDS GCA 90 bp | ACGGTGGTCTTCCCTGCTCCGTTGTGTCCCAGAAGAACAGTGACCTaGCCCTTGTACAGGTTCATGCTCAGATCTCTGATGGCTGTACGT | + |
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Preference number: 5 (lower is better) Translates to: TVVFPAPLCPRRTVT*PLYRFMLRSLMAVR Trigger: ACGTACAGCCATCAGAGATCTGAGCATGAACCTGTACAAGGGGCAGGTCACTGTTCTTCTGGGACACAACGGAGCAGGGAAGACCACCGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039324.7 ENSMUST00000121226.8 |
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| CDS GCA 90 bp | TGGAGTAATGAGACCTGTCAGAACAGAGCAGACGGTGGTCTTCCCTaGTCCGTTGTGTCCCAGAAGAACAGTGACCTGCCCCTTGTACAG | + |
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Preference number: 5 (lower is better) Translates to: WSNETCQNRADGGLP*SVVSQKNSDLPLVQ Trigger: CTGTACAAGGGGCAGGTCACTGTTCTTCTGGGACACAACGGAGCAGGGAAGACCACCGTCTGCTCTGTTCTGACAGGTCTCATTACTCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039324.7 ENSMUST00000121226.8 |
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| CDS CCA 90 bp | GGGTCCTGGATATGGGGCCCAAATGGGAATCTCTGCACCAAGACGTaGAGATCCTTGAACATGTTAAGTGCTGCTTTGGGGGCATGGTGC | + |
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Preference number: 5 (lower is better) Translates to: GSWIWGPNGNLCTKT*RSLNMLSAALGAWC Trigger: GCACCATGCCCCCAAAGCAGCACTTAACATGTTCAAGGATCTCCACGTCTTGGTGCAGAGATTCCCATTTGGGCCCCATATCCAGGACCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039324.7 ENSMUST00000121226.8 |
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| CDS GCA 90 bp | AAAAAGGTGAGGCTTAACATAATGATCGCCAGCGGCAGCAGAACCTaGACCGAGAGCACCAGCATCCAGTTGCGCCGAGAATACGTGATC | + |
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Preference number: 5 (lower is better) Translates to: KKVRLNIMIASGSRT*TESTSIQLRREYVI Trigger: GATCACGTATTCTCGGCGCAACTGGATGCTGGTGCTCTCGGTGCAGGTTCTGCTGCCGCTGGCGATCATTATGTTAAGCCTCACCTTTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039324.7 ENSMUST00000121226.8 |
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| CDS GCA 90 bp | ACGTGGAGATCCTTGAACATGTTAAGTGCTGCTTTGGGGGCATGGTaGCGCATAATCGCTTTGTCTACGGCATGCTGTATGGCCAGGAAG | + |
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Preference number: 5 (lower is better) Translates to: TWRSLNMLSAALGAW*RIIALSTACCMARK Trigger: CTTCCTGGCCATACAGCATGCCGTAGACAAAGCGATTATGCGGCACCATGCCCCCAAAGCAGCACTTAACATGTTCAAGGATCTCCACGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039324.7 ENSMUST00000121226.8 |
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| CDS GCA 90 bp | TGGGAATCTCTGCACCAAGACGTGGAGATCCTTGAACATGTTAAGTaGTGCTTTGGGGGCATGGTGCCGCATAATCGCTTTGTCTACGGC | + |
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Preference number: 5 (lower is better) Translates to: WESLHQDVEILEHVK*CFGGMVPHNRFVYG Trigger: GCCGTAGACAAAGCGATTATGCGGCACCATGCCCCCAAAGCAGCACTTAACATGTTCAAGGATCTCCACGTCTTGGTGCAGAGATTCCCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039324.7 ENSMUST00000121226.8 |
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| CDS CCA 90 bp | AAGACGTGGAGATCCTTGAACATGTTAAGTGCTGCTTTGGGGGCATaGTGCCGCATAATCGCTTTGTCTACGGCATGCTGTATGGCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: KTWRSLNMLSAALGA*CRIIALSTACCMAR Trigger: CCTGGCCATACAGCATGCCGTAGACAAAGCGATTATGCGGCACCATGCCCCCAAAGCAGCACTTAACATGTTCAAGGATCTCCACGTCTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039324.7 ENSMUST00000121226.8 |
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| CDS CCA 90 bp | AGAGCTGAGAGCCAGAACACAGCCGTGCTGACTCCACTCACAAACTaGAGGCTCTTAGACTTAACGCTCTTCTCTCCGACTGTCAAGATG | + |
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Preference number: 5 (lower is better) Translates to: RAESQNTAVLTPLTN*RLLDLTLFSPTVKM Trigger: CATCTTGACAGTCGGAGAGAAGAGCGTTAAGTCTAAGAGCCTCCAGTTTGTGAGTGGAGTCAGCACGGCTGTGTTCTGGCTCTCAGCTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039324.7 ENSMUST00000121226.8 |
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| CDS TCA 90 bp | GGAGCCTCCTTTGCCTTCTTCAGGAGGAAGTCCTCTACAGAACCTTaGATACGCAAAGGAACCTGCCCTGCGGCCACAAGCATTTTTACA | + |
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Preference number: 5 (lower is better) Translates to: GASFAFFRRKSSTEP*IRKGTCPAATSIFT Trigger: TGTAAAAATGCTTGTGGCCGCAGGGCAGGTTCCTTTGCGTATTCAAGGTTCTGTAGAGGACTTCCTCCTGAAGAAGGCAAAGGAGGCTCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039324.7 ENSMUST00000121226.8 |
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| CDS GCA 90 bp | AGCTGCCACCACGTAGAGCTTATCAAAGCCCTCAGGAGCCTCCTTTaGCTTCTTCAGGAGGAAGTCCTCTACAGAACCTTGAATACGCAA | + |
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Preference number: 5 (lower is better) Translates to: SCHHVELIKALRSLL*LLQEEVLYRTLNTQ Trigger: TTGCGTATTCAAGGTTCTGTAGAGGACTTCCTCCTGAAGAAGGCAAAGGAGGCTCCTGAGGGCTTTGATAAGCTCTACGTGGTGGCAGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039324.7 ENSMUST00000121226.8 |
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| CDS GCA 90 bp | CAGCGCCTTCACTGTCGTGTGGTTATTCACATCTTCAAAAGAAGCTaGCACCACGTAGAGCTTATCAAAGCCCTCAGGAGCCTCCTTTGC | + |
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Preference number: 5 (lower is better) Translates to: QRLHCRVVIHIFKRS*HHVELIKALRSLLC Trigger: GCAAAGGAGGCTCCTGAGGGCTTTGATAAGCTCTACGTGGTGGCAGCTTCTTTTGAAGATGTGAATAACCACACGACAGTGAAGGCGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039324.7 ENSMUST00000121226.8 |
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| CDS GCA 90 bp | TTGATGTTGAAACCCTTGACAAAGGCATCCCCAGAGGTGATGGGCTaGTCGCTGGTCAGCATGTTGAAAATGGAAGTCTTCCCAGCTCCA | + |
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Preference number: 5 (lower is better) Translates to: LMLKPLTKASPEVMG*SLVSMLKMEVFPAP Trigger: TGGAGCTGGGAAGACTTCCATTTTCAACATGCTGACCAGCGAGCAGCCCATCACCTCTGGGGATGCCTTTGTCAAGGGTTTCAACATCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039324.7 ENSMUST00000121226.8 |
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| CDS TCA 90 bp | TCAACACAGATGAAGCTGAGCATGAGGAGCAGAGGGAACTCATTCTaGAGGATCACTAAGAATGGGTCCTGGATATGGGGCCCAAATGGG | + |
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Preference number: 5 (lower is better) Translates to: STQMKLSMRSRGNSF*RITKNGSWIWGPNG Trigger: CCCATTTGGGCCCCATATCCAGGACCCATTCTTAGTGATCCTTCAGAATGAGTTCCCTCTGCTCCTCATGCTCAGCTTCATCTGTGTTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039324.7 ENSMUST00000121226.8 |
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| CDS GCA 90 bp | ATCACTAAGAATGGGTCCTGGATATGGGGCCCAAATGGGAATCTCTaGACCAAGACGTGGAGATCCTTGAACATGTTAAGTGCTGCTTTG | + |
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Preference number: 5 (lower is better) Translates to: ITKNGSWIWGPNGNL*TKTWRSLNMLSAAL Trigger: CAAAGCAGCACTTAACATGTTCAAGGATCTCCACGTCTTGGTGCAGAGATTCCCATTTGGGCCCCATATCCAGGACCCATTCTTAGTGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039324.7 ENSMUST00000121226.8 |
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| CDS GCA 90 bp | CTTGATGGTTTCCGCCTCCTCCAGAACATCTTCATCTTCAGGTTCTaGTACATCAAAGATCATTCCCGATTTTTCCTTCCAGAAGGAAGG | + |
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Preference number: 5 (lower is better) Translates to: LDGFRLLQNIFIFRF*YIKDHSRFFLPEGR Trigger: CCTTCCTTCTGGAAGGAAAAATCGGGAATGATCTTTGATGTAGCAGAACCTGAAGATGAAGATGTTCTGGAGGAGGCGGAAACCATCAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039324.7 ENSMUST00000121226.8 |
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| CDS GCA 90 bp | GGCACTGAAGGAAAGCCTAGAACTTCAAAGTCAACAGCAAAGGTTTaGTCCACCACTTCAGTGACAGCTTTTAAGGTTTCACTTTTGGAA | + |
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Preference number: 5 (lower is better) Translates to: GTEGKPRTSKSTAKV*STTSVTAFKVSLLE Trigger: TTCCAAAAGTGAAACCTTAAAAGCTGTCACTGAAGTGGTGGAGCAAACCTTTGCTGTTGACTTTGAAGTTCTAGGCTTTCCTTCAGTGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039324.7 ENSMUST00000121226.8 ENSMUST00000234232.2 |
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| CDS GCA 90 bp | GTAATTGAGACAGAAATGAAAAACGTGATGAACCAAGCAACCCAGTaGAGCCAGCTCTCCACTCCCATCATACTCATATATTCCTTCTGT | + |
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Preference number: 5 (lower is better) Translates to: VIETEMKNVMNQATQ*SQLSTPIILIYSFC Trigger: ACAGAAGGAATATATGAGTATGATGGGAGTGGAGAGCTGGCTGCACTGGGTTGCTTGGTTCATCACGTTTTTCATTTCTGTCTCAATTAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039324.7 ENSMUST00000121226.8 |
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| CDS TCA 90 bp | TCAACATTTCCAGGAGAGTTATCAGAGTCTTCCGCCTCTTTAAGATaGAATTCTTCCAGAGAAGGAGTTTTAATTTCTTCAACACCTCCA | + |
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Preference number: 5 (lower is better) Translates to: STFPGELSESSASLR*NSSREGVLISSTPP Trigger: TGGAGGTGTTGAAGAAATTAAAACTCCTTCTCTGGAAGAATTTCATCTTAAAGAGGCGGAAGACTCTGATAACTCTCCTGGAAATGTTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039324.7 ENSMUST00000121226.8 ENSMUST00000234232.2 |
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| CDS TCA 90 bp | CAAAACTGCATTCGGTATGTGGTGATAAATTACTTCAGAGAGCTTTaGGGTGTCGCAGAGAGGTGTTTTTATTATAGTCATATAGTATCC | + |
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Preference number: 5 (lower is better) Translates to: QNCIRYVVINYFREL*GVAERCFYYSHIVS Trigger: GGATACTATATGACTATAATAAAAACACCTCTCTGCGACACCTCAAAGCTCTCTGAAGTAATTTATCACCACATACCGAATGCAGTTTTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039324.7 ENSMUST00000121226.8 |
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| CDS TCA 72 bp | GTCCCAGATGGCCCTCCTGGAGGGGGAGTCCAGGCCTaGGGTGGGCTCATCCAAAATCAGCACCTTAGAGCC | + |
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Preference number: 6 (lower is better) Translates to: VPDGPPGGGVQA*GGLIQNQHLRA Trigger: GGCTCTAAGGTGCTGATTTTGGATGAGCCCACCTCAGGCCTGGACTCCCCCTCCAGGAGGGCCATCTGGGAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039324.7 ENSMUST00000121226.8 |
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| CDS GCA 72 bp | GAGACCTGTCAGAACAGAGCAGACGGTGGTCTTCCCTaGTCCGTTGTGTCCCAGAAGAACAGTGACCTGCCC | + |
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Preference number: 6 (lower is better) Translates to: ETCQNRADGGLP*SVVSQKNSDLP Trigger: GGGCAGGTCACTGTTCTTCTGGGACACAACGGAGCAGGGAAGACCACCGTCTGCTCTGTTCTGACAGGTCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039324.7 ENSMUST00000121226.8 |
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| CDS CCA 72 bp | GGATGGGCTCTGAGGGAGGTGGGGATGGAAGTGGTTTaGGAGTCGGAGAAGAAAGACGTGATGGAGGACTCG | + |
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Preference number: 6 (lower is better) Translates to: GWALREVGMEVV*ESEKKDVMEDS Trigger: CGAGTCCTCCATCACGTCTTTCTTCTCCGACTCCCAAACCACTTCCATCCCCACCTCCCTCAGAGCCCATCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039324.7 ENSMUST00000121226.8 |
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| CDS TCA 72 bp | GTATCCTGCACCGTATTTCTGCTTGAGGAACGATGGTaGCCCGCAGCACTGGAGCTCCCCCTTGGCCAAGAT | + |
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Preference number: 6 (lower is better) Translates to: VSCTVFLLEERW*PAALELPLGQD Trigger: ATCTTGGCCAAGGGGGAGCTCCAGTGCTGCGGGTCACCATCGTTCCTCAAGCAGAAATACGGTGCAGGATAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039324.7 ENSMUST00000121226.8 |
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| CDS CAA 90 bp | ATCCACTGCCGCACCTTCGCTATGTCAGACTTGATGTTGAAACCCTaGACAAAGGCATCCCCAGAGGTGATGGGCTGCTCGCTGGTCAGC | + |
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Preference number: 6 (lower is better) Translates to: IHCRTFAMSDLMLKP*TKASPEVMGCSLVS Trigger: GCTGACCAGCGAGCAGCCCATCACCTCTGGGGATGCCTTTGTCAAGGGTTTCAACATCAAGTCTGACATAGCGAAGGTGCGGCAGTGGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039324.7 ENSMUST00000121226.8 |
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| CDS GCA 72 bp | GCTCAGGAAGGTGAGCATCACCACGAGCTTCACACATaGACTGCCAGGAGTGTTAAAGGAGAAGCTGACCGT | + |
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Preference number: 6 (lower is better) Translates to: AQEGEHHHELHT*TARSVKGEADR Trigger: ACGGTCAGCTTCTCCTTTAACACTCCTGGCAGTGCATGTGTGAAGCTCGTGGTGATGCTCACCTTCCTGAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039324.7 ENSMUST00000121226.8 |
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| CDS CCA 72 bp | AGCCCAGCCGTAGAGCATCATTATCAAGACCACCGCTaGGATGCTCTCGTGGTGTGCAAAAGCCTCTTCCTT | + |
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Preference number: 6 (lower is better) Translates to: SPAVEHHYQDHR*DALVVCKSLFL Trigger: AAGGAAGAGGCTTTTGCACACCACGAGAGCATCCCAGCGGTGGTCTTGATAATGATGCTCTACGGCTGGGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039324.7 ENSMUST00000121226.8 |
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| CDS CAA 72 bp | GTCCTTCAGACCAAGCAGATGCAGCATCTCCTGGGTTaGCTCGTGACAGTCCTGAGGAGACAGACCTTTCAG | + |
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Preference number: 6 (lower is better) Translates to: VLQTKQMQHLLG*LVTVLRRQTFQ Trigger: CTGAAAGGTCTGTCTCCTCAGGACTGTCACGAGCAAACCCAGGAGATGCTGCATCTGCTTGGTCTGAAGGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039324.7 ENSMUST00000121226.8 |
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| CDS TCA 72 bp | TTTGCCTTCTTCAGGAGGAAGTCCTCTACAGAACCTTaGATACGCAAAGGAACCTGCCCTGCGGCCACAAGC | + |
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Preference number: 6 (lower is better) Translates to: FAFFRRKSSTEP*IRKGTCPAATS Trigger: GCTTGTGGCCGCAGGGCAGGTTCCTTTGCGTATTCAAGGTTCTGTAGAGGACTTCCTCCTGAAGAAGGCAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039324.7 ENSMUST00000121226.8 |
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| CDS CAA 72 bp | CTTTGCCTTCTTCAGGAGGAAGTCCTCTACAGAACCTaGAATACGCAAAGGAACCTGCCCTGCGGCCACAAG | + |
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Preference number: 6 (lower is better) Translates to: LCLLQEEVLYRT*NTQRNLPCGHK Trigger: CTTGTGGCCGCAGGGCAGGTTCCTTTGCGTATTCAAGGTTCTGTAGAGGACTTCCTCCTGAAGAAGGCAAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039324.7 ENSMUST00000121226.8 |
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| CDS CAA 90 bp | ATATGGGGCCCAAATGGGAATCTCTGCACCAAGACGTGGAGATCCTaGAACATGTTAAGTGCTGCTTTGGGGGCATGGTGCCGCATAATC | + |
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Preference number: 6 (lower is better) Translates to: IWGPNGNLCTKTWRS*NMLSAALGAWCRII Trigger: GATTATGCGGCACCATGCCCCCAAAGCAGCACTTAACATGTTCAAGGATCTCCACGTCTTGGTGCAGAGATTCCCATTTGGGCCCCATAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039324.7 ENSMUST00000121226.8 |
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| CDS CAA 90 bp | CTGAGCAAAGCTGAAGTCTCCCCAGACACTGCCTATGTTCCTCCATaGGATGCCTGTGCCTTCTGCTTCAAACAGAGATATGAACCGGAC | + |
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Preference number: 6 (lower is better) Translates to: LSKAEVSPDTAYVPP*DACAFCFKQRYEPD Trigger: GTCCGGTTCATATCTCTGTTTGAAGCAGAAGGCACAGGCATCCAATGGAGGAACATAGGCAGTGTCTGGGGAGACTTCAGCTTTGCTCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039324.7 ENSMUST00000121226.8 |
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| CDS CAA 90 bp | AGGAGCCTCCTTTGCCTTCTTCAGGAGGAAGTCCTCTACAGAACCTaGAATACGCAAAGGAACCTGCCCTGCGGCCACAAGCATTTTTAC | + |
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Preference number: 6 (lower is better) Translates to: RSLLCLLQEEVLYRT*NTQRNLPCGHKHFY Trigger: GTAAAAATGCTTGTGGCCGCAGGGCAGGTTCCTTTGCGTATTCAAGGTTCTGTAGAGGACTTCCTCCTGAAGAAGGCAAAGGAGGCTCCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039324.7 ENSMUST00000121226.8 |
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| CDS CAA 90 bp | AAGCTGCCACCACGTAGAGCTTATCAAAGCCCTCAGGAGCCTCCTTaGCCTTCTTCAGGAGGAAGTCCTCTACAGAACCTTGAATACGCA | + |
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Preference number: 6 (lower is better) Translates to: KLPPRRAYQSPQEPP*PSSGGSPLQNLEYA Trigger: TGCGTATTCAAGGTTCTGTAGAGGACTTCCTCCTGAAGAAGGCAAAGGAGGCTCCTGAGGGCTTTGATAAGCTCTACGTGGTGGCAGCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039324.7 ENSMUST00000121226.8 |
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| CDS TCA 72 bp | CCGAGAGCACCAGCATCCAGTTGCGCCGAGAATACGTaGTCTTTTTCAAGAGCATGGCGTAGAATTGTTGGC | + |
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Preference number: 6 (lower is better) Translates to: PRAPASSCAENT*SFSRAWRRIVG Trigger: GCCAACAATTCTACGCCATGCTCTTGAAAAAGATCACGTATTCTCGGCGCAACTGGATGCTGGTGCTCTCGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039324.7 ENSMUST00000121226.8 |
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| CDS GCA 72 bp | ACTGCCTATGTTCCTCCATTGGATGCCTGTGCCTTCTaGTTCAAACAGAGATATGAACCGGACTCCCGTTGC | + |
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Preference number: 6 (lower is better) Translates to: TAYVPPLDACAF*FKQRYEPDSRC Trigger: GCAACGGGAGTCCGGTTCATATCTCTGTTTGAAGCAGAAGGCACAGGCATCCAATGGAGGAACATAGGCAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039324.7 ENSMUST00000121226.8 |
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| CDS GCA 72 bp | CACGTAGAGCTTATCAAAGCCCTCAGGAGCCTCCTTTaGCTTCTTCAGGAGGAAGTCCTCTACAGAACCTTG | + |
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Preference number: 6 (lower is better) Translates to: HVELIKALRSLL*LLQEEVLYRTL Trigger: CAAGGTTCTGTAGAGGACTTCCTCCTGAAGAAGGCAAAGGAGGCTCCTGAGGGCTTTGATAAGCTCTACGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039324.7 ENSMUST00000121226.8 |
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| CDS GCA 72 bp | AGCCGTAGAGCATCATTATCAAGACCACCGCTGGGATaGTCTCGTGGTGTGCAAAAGCCTCTTCCTTATACC | + |
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Preference number: 6 (lower is better) Translates to: SRRASLSRPPLG*SRGVQKPLPYT Trigger: GGTATAAGGAAGAGGCTTTTGCACACCACGAGAGCATCCCAGCGGTGGTCTTGATAATGATGCTCTACGGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039324.7 ENSMUST00000121226.8 |
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| CDS CAA 72 bp | CCAAATGGGAATCTCTGCACCAAGACGTGGAGATCCTaGAACATGTTAAGTGCTGCTTTGGGGGCATGGTGC | + |
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Preference number: 6 (lower is better) Translates to: PNGNLCTKTWRS*NMLSAALGAWC Trigger: GCACCATGCCCCCAAAGCAGCACTTAACATGTTCAAGGATCTCCACGTCTTGGTGCAGAGATTCCCATTTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039324.7 ENSMUST00000121226.8 |
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| CDS CAA 72 bp | GTTGGCAGAGAAGACAGAAGCCCGTATTTAGTCTCATaGGCTGTTCAGTGCTCACTGGGAAGGTCCCTGAGT | + |
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Preference number: 6 (lower is better) Translates to: VGREDRSPYLVS*AVQCSLGRSLS Trigger: ACTCAGGGACCTTCCCAGTGAGCACTGAACAGCCAATGAGACTAAATACGGGCTTCTGTCTTCTCTGCCAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039324.7 ENSMUST00000121226.8 |
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| CDS TCA 72 bp | ATGAAGCTGAGCATGAGGAGCAGAGGGAACTCATTCTaGAGGATCACTAAGAATGGGTCCTGGATATGGGGC | + |
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Preference number: 6 (lower is better) Translates to: MKLSMRSRGNSF*RITKNGSWIWG Trigger: GCCCCATATCCAGGACCCATTCTTAGTGATCCTTCAGAATGAGTTCCCTCTGCTCCTCATGCTCAGCTTCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039324.7 ENSMUST00000121226.8 |
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| CDS TCA 72 bp | ATTGGATGCCTGTGCCTTCTGCTTCAAACAGAGATATaGACCGGACTCCCGTTGCCATGGCAACATTGGAGA | + |
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Preference number: 6 (lower is better) Translates to: IGCLCLLLQTEI*TGLPLPWQHWR Trigger: TCTCCAATGTTGCCATGGCAACGGGAGTCCGGTTCATATCTCTGTTTGAAGCAGAAGGCACAGGCATCCAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039324.7 ENSMUST00000121226.8 |
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| CDS GCA 72 bp | TCCTTGAACATGTTAAGTGCTGCTTTGGGGGCATGGTaGCGCATAATCGCTTTGTCTACGGCATGCTGTATG | + |
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Preference number: 6 (lower is better) Translates to: SLNMLSAALGAW*RIIALSTACCM Trigger: CATACAGCATGCCGTAGACAAAGCGATTATGCGGCACCATGCCCCCAAAGCAGCACTTAACATGTTCAAGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039324.7 ENSMUST00000121226.8 |
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| CDS CCA 72 bp | AGATCCTTGAACATGTTAAGTGCTGCTTTGGGGGCATaGTGCCGCATAATCGCTTTGTCTACGGCATGCTGT | + |
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Preference number: 6 (lower is better) Translates to: RSLNMLSAALGA*CRIIALSTACC Trigger: ACAGCATGCCGTAGACAAAGCGATTATGCGGCACCATGCCCCCAAAGCAGCACTTAACATGTTCAAGGATCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039324.7 ENSMUST00000121226.8 |
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| CDS CCA 72 bp | ATATGGGGCCCAAATGGGAATCTCTGCACCAAGACGTaGAGATCCTTGAACATGTTAAGTGCTGCTTTGGGG | + |
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Preference number: 6 (lower is better) Translates to: IWGPNGNLCTKT*RSLNMLSAALG Trigger: CCCCAAAGCAGCACTTAACATGTTCAAGGATCTCCACGTCTTGGTGCAGAGATTCCCATTTGGGCCCCATAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039324.7 ENSMUST00000121226.8 |
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| CDS CCA 72 bp | CTGAAGTCTCCCCAGACACTGCCTATGTTCCTCCATTaGATGCCTGTGCCTTCTGCTTCAAACAGAGATATG | + |
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Preference number: 6 (lower is better) Translates to: LKSPQTLPMFLH*MPVPSASNRDM Trigger: CATATCTCTGTTTGAAGCAGAAGGCACAGGCATCCAATGGAGGAACATAGGCAGTGTCTGGGGAGACTTCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039324.7 ENSMUST00000121226.8 |
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| CDS CAA 72 bp | GCTGAAGTCTCCCCAGACACTGCCTATGTTCCTCCATaGGATGCCTGTGCCTTCTGCTTCAAACAGAGATAT | + |
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Preference number: 6 (lower is better) Translates to: AEVSPDTAYVPP*DACAFCFKQRY Trigger: ATATCTCTGTTTGAAGCAGAAGGCACAGGCATCCAATGGAGGAACATAGGCAGTGTCTGGGGAGACTTCAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039324.7 ENSMUST00000121226.8 |
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| CDS CAA 72 bp | GAGGTTTGGGCCAGGCAGGTAATATTGAAGCATGTTTaGGTGCTCGTCTTCCAAATTGCTGCCTGGGAAGGT | + |
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Preference number: 6 (lower is better) Translates to: EVWARQVILKHV*VLVFQIAAWEG Trigger: ACCTTCCCAGGCAGCAATTTGGAAGACGAGCACCAAAACATGCTTCAATATTACCTGCCTGGCCCAAACCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039324.7 ENSMUST00000121226.8 |
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| CDS CAA 90 bp | CGTAGAATTGTTGGCAGAGAAGACAGAAGCCCGTATTTAGTCTCATaGGCTGTTCAGTGCTCACTGGGAAGGTCCCTGAGTGGAGACATT | + |
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Preference number: 6 (lower is better) Translates to: RRIVGREDRSPYLVS*AVQCSLGRSLSGDI Trigger: AATGTCTCCACTCAGGGACCTTCCCAGTGAGCACTGAACAGCCAATGAGACTAAATACGGGCTTCTGTCTTCTCTGCCAACAATTCTACG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039324.7 ENSMUST00000121226.8 |
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| CDS GCA 72 bp | AATGGGTCCTGGATATGGGGCCCAAATGGGAATCTCTaGACCAAGACGTGGAGATCCTTGAACATGTTAAGT | + |
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Preference number: 6 (lower is better) Translates to: NGSWIWGPNGNL*TKTWRSLNMLS Trigger: ACTTAACATGTTCAAGGATCTCCACGTCTTGGTGCAGAGATTCCCATTTGGGCCCCATATCCAGGACCCATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039324.7 ENSMUST00000121226.8 |
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| CDS GCA 72 bp | CACTGTCGTGTGGTTATTCACATCTTCAAAAGAAGCTaGCACCACGTAGAGCTTATCAAAGCCCTCAGGAGC | + |
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Preference number: 6 (lower is better) Translates to: HCRVVIHIFKRS*HHVELIKALRS Trigger: GCTCCTGAGGGCTTTGATAAGCTCTACGTGGTGGCAGCTTCTTTTGAAGATGTGAATAACCACACGACAGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039324.7 ENSMUST00000121226.8 |
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| CDS TCA 72 bp | TCTCATTGGCTGTTCAGTGCTCACTGGGAAGGTCCCTaGGTGGAGACATTTAATTCTGTCAACAGGAACTCT | + |
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Preference number: 6 (lower is better) Translates to: SHWLFSAHWEGP*VETFNSVNRNS Trigger: AGAGTTCCTGTTGACAGAATTAAATGTCTCCACTCAGGGACCTTCCCAGTGAGCACTGAACAGCCAATGAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039324.7 ENSMUST00000121226.8 |
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| CDS TCA 72 bp | TATAGGTCTTCACCAGCTTGTCTGCACACACACACATaGGTAAGTTCTCAAGGATCAGGTCGACACAGGCTT | + |
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Preference number: 6 (lower is better) Translates to: YRSSPACLHTHT*VSSQGSGRHRL Trigger: AAGCCTGTGTCGACCTGATCCTTGAGAACTTACTCATGTGTGTGTGTGCAGACAAGCTGGTGAAGACCTATA 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039324.7 ENSMUST00000121226.8 |
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| CDS CAA 72 bp | GATGGAGTAGTCTTCCAACATGTAATCCTTCTTGGCTaGTTCCATAATGCTAAACACCTTCGCCCAGCTGAG | + |
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Preference number: 6 (lower is better) Translates to: DGVVFQHVILLG*FHNAKHLRPAE Trigger: CTCAGCTGGGCGAAGGTGTTTAGCATTATGGAACAAGCCAAGAAGGATTACATGTTGGAAGACTACTCCATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039324.7 ENSMUST00000121226.8 |
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| CDS CAA 90 bp | GCAAAAGTAGAGATTCCCAGCTCTGTCTGTCTCAGTTCCAAGTCATaGAATAGAGCCTCAAACCTGTGTATGGTCTTCTTAGGAAGTGTG | + |
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Preference number: 6 (lower is better) Translates to: AKVEIPSSVCLSSKS*NRASNLCMVFLGSV Trigger: CACACTTCCTAAGAAGACCATACACAGGTTTGAGGCTCTATTCAATGACTTGGAACTGAGACAGACAGAGCTGGGAATCTCTACTTTTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039324.7 ENSMUST00000121226.8 |
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| CDS GCA 72 bp | ACAGAAATGAAAAACGTGATGAACCAAGCAACCCAGTaGAGCCAGCTCTCCACTCCCATCATACTCATATAT | + |
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Preference number: 6 (lower is better) Translates to: TEMKNVMNQATQ*SQLSTPIILIY Trigger: ATATATGAGTATGATGGGAGTGGAGAGCTGGCTGCACTGGGTTGCTTGGTTCATCACGTTTTTCATTTCTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039324.7 ENSMUST00000121226.8 |
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| CDS GCA 72 bp | GAAGAAGCCAGAGAGCCTGGATTTCAGTACATAGAATaGATTGGCTTCAGTGAGGAAAAGCATGGTGATGTA | + |
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Preference number: 6 (lower is better) Translates to: EEAREPGFQYIE*IGFSEEKHGDV Trigger: TACATCACCATGCTTTTCCTCACTGAAGCCAATGCATTCTATGTACTGAAATCCAGGCTCTCTGGCTTCTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039324.7 ENSMUST00000121226.8 |
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| CDS GCA 72 bp | TTCCGCCTCCTCCAGAACATCTTCATCTTCAGGTTCTaGTACATCAAAGATCATTCCCGATTTTTCCTTCCA | + |
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Preference number: 6 (lower is better) Translates to: FRLLQNIFIFRF*YIKDHSRFFLP Trigger: TGGAAGGAAAAATCGGGAATGATCTTTGATGTAGCAGAACCTGAAGATGAAGATGTTCTGGAGGAGGCGGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039324.7 ENSMUST00000121226.8 |
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| CDS CAA 72 bp | GACAGTGCCACCTATCACAGTTCCTACGTGGGCTCTTaGGAAGAATGTGCTCATCATGAATGCAAAGAAAAT | + |
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Preference number: 6 (lower is better) Translates to: DSATYHSSYVGS*EECAHHECKEN Trigger: ATTTTCTTTGCATTCATGATGAGCACATTCTTCCAAAGAGCCCACGTAGGAACTGTGATAGGTGGCACTGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039324.7 ENSMUST00000121226.8 |
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| CDS TCA 72 bp | GCGGGTTTTTCTTTACTAACGTTTCCAAATAACGCTTaGTGGTTTCCGCCTCCTCCAGAACATCTTCATCTT | + |
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Preference number: 6 (lower is better) Translates to: AGFSLLTFPNNA*WFPPPPEHLHL Trigger: AAGATGAAGATGTTCTGGAGGAGGCGGAAACCATCAAGCGTTATTTGGAAACGTTAGTAAAGAAAAACCCGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039324.7 ENSMUST00000121226.8 |
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| CDS GCA 72 bp | GGAAAGCCTAGAACTTCAAAGTCAACAGCAAAGGTTTaGTCCACCACTTCAGTGACAGCTTTTAAGGTTTCA | + |
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Preference number: 6 (lower is better) Translates to: GKPRTSKSTAKV*STTSVTAFKVS Trigger: TGAAACCTTAAAAGCTGTCACTGAAGTGGTGGAGCAAACCTTTGCTGTTGACTTTGAAGTTCTAGGCTTTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039324.7 ENSMUST00000121226.8 ENSMUST00000234232.2 |
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| CDS CCA 72 bp | ACAGTGCCACCTATCACAGTTCCTACGTGGGCTCTTTaGAAGAATGTGCTCATCATGAATGCAAAGAAAATT | + |
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Preference number: 6 (lower is better) Translates to: TVPPITVPTWAL*KNVLIMNAKKI Trigger: AATTTTCTTTGCATTCATGATGAGCACATTCTTCCAAAGAGCCCACGTAGGAACTGTGATAGGTGGCACTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039324.7 ENSMUST00000121226.8 |
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| CDS TCA 72 bp | CAAAGTCAACAGCAAAGGTTTGCTCCACCACTTCAGTaGCAGCTTTTAAGGTTTCACTTTTGGAAGGGATAT | + |
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Preference number: 6 (lower is better) Translates to: QSQQQRFAPPLQ*QLLRFHFWKGY Trigger: ATATCCCTTCCAAAAGTGAAACCTTAAAAGCTGTCACTGAAGTGGTGGAGCAAACCTTTGCTGTTGACTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039324.7 ENSMUST00000121226.8 ENSMUST00000234232.2 |
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| CDS TCA 72 bp | CACAGCCAACAGGGGTACCTTGTCTTTATAGACCTTTaGCACTTCTTTAACAACAAGCGGGTTTTTCTTTAC | + |
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Preference number: 6 (lower is better) Translates to: HSQQGYLVFIDL*HFFNNKRVFLY Trigger: GTAAAGAAAAACCCGCTTGTTGTTAAAGAAGTGTCAAAGGTCTATAAAGACAAGGTACCCCTGTTGGCTGTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039324.7 ENSMUST00000121226.8 |
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| CDS CCA 72 bp | TGCAAAACTTTTTCAGCTCAAAGTTATAGTACAAGTTaGACAAGGCCATTCCCAGGCAATGTCCAGGAAGAA | + |
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Preference number: 6 (lower is better) Translates to: CKTFSAQSYSTS*TRPFPGNVQEE Trigger: TTCTTCCTGGACATTGCCTGGGAATGGCCTTGTCCAACTTGTACTATAACTTTGAGCTGAAAAAGTTTTGCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039324.7 ENSMUST00000121226.8 |
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| CDS CCA 72 bp | AAAGATGTACCAAGACTTAGGTATTCCAAACTTTCTTaGGAAGAGAGACTCCACCAAAAAGGCTATCAGACA | + |
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Preference number: 6 (lower is better) Translates to: KDVPRLRYSKLS*EERLHQKGYQT Trigger: TGTCTGATAGCCTTTTTGGTGGAGTCTCTCTTCCCAAGAAAGTTTGGAATACCTAAGTCTTGGTACATCTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039324.7 ENSMUST00000121226.8 |
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| CDS TCA 72 bp | ATTCGGTATGTGGTGATAAATTACTTCAGAGAGCTTTaGGGTGTCGCAGAGAGGTGTTTTTATTATAGTCAT | + |
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Preference number: 6 (lower is better) Translates to: IRYVVINYFREL*GVAERCFYYSH Trigger: ATGACTATAATAAAAACACCTCTCTGCGACACCTCAAAGCTCTCTGAAGTAATTTATCACCACATACCGAAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039324.7 ENSMUST00000121226.8 |
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| CDS CAA 72 bp | ATGTTCTCTTGGACCACATATCCTTCTAAAACATCATaGCAGTCAATATCACTCAAGTTCTTAGCACTGCAA | + |
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Preference number: 6 (lower is better) Translates to: MFSWTTYPSKTS*QSISLKFLALQ Trigger: TTGCAGTGCTAAGAACTTGAGTGATATTGACTGCAATGATGTTTTAGAAGGATATGTGGTCCAAGAGAACAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039324.7 ENSMUST00000121226.8 |
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| CDS TCA 72 bp | ACCTTATACAGATGTTGGATTTCAATTGTGTTCATCTaGTTTGTTGGCTCATCCTGCATGAAATTCCCTTTT | + |
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Preference number: 6 (lower is better) Translates to: TLYRCWISIVFI*FVGSSCMKFPF Trigger: AAAAGGGAATTTCATGCAGGATGAGCCAACAAATCAGATGAACACAATTGAAATCCAACATCTGTATAAGGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039324.7 ENSMUST00000121226.8 |
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