Pregenerated sensors for ABCA16 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000051900Ensembl transcript IDs: ENSMUST00000056042.6, ENSMUST00000120490.8
Found 66 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | GCGATAGCAGTGCTTAGCCTACGTTTGCTTCCAGCACTGTACGTGTaGATAAACTGGTCAGCAATGGGTTCCAGGTGCACTGAATGCAGA | + |
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Preference number: 5 (lower is better) Translates to: AIAVLSLRLLPALYV*INWSAMGSRCTECR Trigger: TCTGCATTCAGTGCACCTGGAACCCATTGCTGACCAGTTTATCCACACGTACAGTGCTGGAAGCAAACGTAGGCTAAGCACTGCTATCGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056042.6 ENSMUST00000120490.8 |
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| CDS TCA 90 bp | ACAGGGTTGTGGTCTTTCCTGCCCCATTGTGTCCCAGAAGAACAGTaGCCTGCCCCTCATATATGTTCAGTGACAAGTTGTTTACTGCAG | + |
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Preference number: 5 (lower is better) Translates to: TGLWSFLPHCVPEEQ*PAPHICSVTSCLLQ Trigger: CTGCAGTAAACAACTTGTCACTGAACATATATGAGGGGCAGGTCACTGTTCTTCTGGGACACAATGGGGCAGGAAAGACCACAACCCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056042.6 ENSMUST00000120490.8 |
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| CDS TCA 90 bp | GGTTTGCCAAACCAATATGAGCGCATAAGGAAAAAGTACCATGGTTaGGGCACACCACACTGTCCAGGAAAGACGGCTTCTACATACCAG | + |
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Preference number: 5 (lower is better) Translates to: GLPNQYERIRKKYHG*GTPHCPGKTASTYQ Trigger: CTGGTATGTAGAAGCCGTCTTTCCTGGACAGTGTGGTGTGCCTCAACCATGGTACTTTTTCCTTATGCGCTCATATTGGTTTGGCAAACC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000056042.6 ENSMUST00000120490.8 |
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| CDS GCA 90 bp | CCAGCACTGTACGTGTGGATAAACTGGTCAGCAATGGGTTCCAGGTaGACTGAATGCAGAAAGGCTTCCACATACTCATTAATGTCTTGC | + |
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Preference number: 5 (lower is better) Translates to: PALYVWINWSAMGSR*TECRKASTYSLMSC Trigger: GCAAGACATTAATGAGTATGTGGAAGCCTTTCTGCATTCAGTGCACCTGGAACCCATTGCTGACCAGTTTATCCACACGTACAGTGCTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056042.6 ENSMUST00000120490.8 |
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| CDS GCA 90 bp | GCTTTCATGATACAGCATGATGCTCTTGTCCAAAGCATGCTGTACTaGCAGGAATCCTTCCTTAATATACCCAGGACTTCCTCCATCAAG | + |
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Preference number: 5 (lower is better) Translates to: AFMIQHDALVQSMLY*QESFLNIPRTSSIK Trigger: CTTGATGGAGGAAGTCCTGGGTATATTAAGGAAGGATTCCTGGCAGTACAGCATGCTTTGGACAAGAGCATCATGCTGTATCATGAAAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056042.6 ENSMUST00000120490.8 |
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| CDS CCA 90 bp | GTAAAATGGTTCGATTGTGTTTATAATGCTGAAGGATATCCCAGGTaGCTCTTCTTGACACTGGGTCCATGCCGGATGATGGCTCATCAA | + |
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Preference number: 5 (lower is better) Translates to: VKWFDCVYNAEGYPR*LFLTLGPCRMMAHQ Trigger: TTGATGAGCCATCATCCGGCATGGACCCAGTGTCAAGAAGAGCCACCTGGGATATCCTTCAGCATTATAAACACAATCGAACCATTTTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056042.6 ENSMUST00000120490.8 |
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| CDS TCA 90 bp | TTTCATCAAACAGCTTTTTCCCAGCACTGCTTTCATGATACAGCATaGTGCTCTTGTCCAAAGCATGCTGTACTGCCAGGAATCCTTCCT | + |
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Preference number: 5 (lower is better) Translates to: FHQTAFSQHCFHDTA*CSCPKHAVLPGILP Trigger: AGGAAGGATTCCTGGCAGTACAGCATGCTTTGGACAAGAGCATCATGCTGTATCATGAAAGCAGTGCTGGGAAAAAGCTGTTTGATGAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000056042.6 ENSMUST00000120490.8 |
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| CDS TCA 90 bp | CATGTGGTTCAGCACAGATTCAGTCTGAGGACAGTAACCAATTCTTaGCCTAATCTTTCTTGGGGTTCTAGTGACACTATTGCCATCAAT | + |
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Preference number: 5 (lower is better) Translates to: HVVQHRFSLRTVTNS*PNLSWGSSDTIAIN Trigger: ATTGATGGCAATAGTGTCACTAGAACCCCAAGAAAGATTAGGTCAAGAATTGGTTACTGTCCTCAGACTGAATCTGTGCTGAACCACATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056042.6 ENSMUST00000120490.8 |
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| CDS TCA 90 bp | ATAAGAAAGCATCAAACAAAAGCATTCCAAGCATATAGCCAAAGTTaGGGTTATCCTCAAGATTGGCTGGTGTCCAAAGGTTGTGCCATT | + |
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Preference number: 5 (lower is better) Translates to: IRKHQTKAFQAYSQS*GYPQDWLVSKGCAI Trigger: AATGGCACAACCTTTGGACACCAGCCAATCTTGAGGATAACCTCAACTTTGGCTATATGCTTGGAATGCTTTTGTTTGATGCTTTCTTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056042.6 ENSMUST00000120490.8 |
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| CDS TCA 90 bp | ATTGTGTCCCAGAAGAACAGTGACCTGCCCCTCATATATGTTCAGTaGCAAGTTGTTTACTGCAGGTTTGTTTTTAAATTCCTTGTGCAA | + |
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Preference number: 5 (lower is better) Translates to: IVSQKNSDLPLIYVQ*QVVYCRFVFKFLVQ Trigger: TTGCACAAGGAATTTAAAAACAAACCTGCAGTAAACAACTTGTCACTGAACATATATGAGGGGCAGGTCACTGTTCTTCTGGGACACAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000056042.6 ENSMUST00000120490.8 |
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| CDS CCA 90 bp | GAATCCTTCCTTAATATACCCAGGACTTCCTCCATCAAGATAATTTaGATTCCTGGGTCGTATAGAAGGATGATTAGGAAAGAGAAGTCT | + |
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Preference number: 5 (lower is better) Translates to: ESFLNIPRTSSIKII*IPGSYRRMIRKEKS Trigger: AGACTTCTCTTTCCTAATCATCCTTCTATACGACCCAGGAATCCAAATTATCTTGATGGAGGAAGTCCTGGGTATATTAAGGAAGGATTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056042.6 ENSMUST00000120490.8 |
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| CDS TCA 90 bp | CTGAGACATATTATCAAAGAGAATGTACTCCTCAAACTCTGCTTCTaGAGGAAAACCTCGAACTTTGATAGTGGTGTTGAGATTCCTCTT | + |
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Preference number: 5 (lower is better) Translates to: LRHIIKENVLLKLCF*RKTSNFDSGVEIPL Trigger: AAGAGGAATCTCAACACCACTATCAAAGTTCGAGGTTTTCCTTCAGAAGCAGAGTTTGAGGAGTACATTCTCTTTGATAATATGTCTCAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056042.6 ENSMUST00000120490.8 |
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| CDS GCA 90 bp | CCAAAGTTGAGGTTATCCTCAAGATTGGCTGGTGTCCAAAGGTTGTaGCATTTAACACCAATCTCTTGTATTTCCAACTTGATTAAGATA | + |
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Preference number: 5 (lower is better) Translates to: PKLRLSSRLAGVQRL*HLTPISCISNLIKI Trigger: TATCTTAATCAAGTTGGAAATACAAGAGATTGGTGTTAAATGGCACAACCTTTGGACACCAGCCAATCTTGAGGATAACCTCAACTTTGG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120490.8 |
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| CDS GCA 90 bp | ATCAAAATACTTGCTGATACTCATTGCAAGGTTGTAACTAGGCAATaGCATCAAAATTGCCCTTATGAGGATGTGGACAAAGTTAGGAAA | + |
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Preference number: 5 (lower is better) Translates to: IKILADTHCKVVTRQ*HQNCPYEDVDKVRK Trigger: TTTCCTAACTTTGTCCACATCCTCATAAGGGCAATTTTGATGGCATTGCCTAGTTACAACCTTGCAATGAGTATCAGCAAGTATTTTGAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056042.6 ENSMUST00000120490.8 |
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| CDS CCA 90 bp | ATTCTGCTGCTCATCTTGTCTCATCTTTCTGTATGCCAAGTAATATaGTTGGATAGTTTGAATACTCTTTTGAGGAGTTGCCAGCTTATT | + |
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Preference number: 5 (lower is better) Translates to: ILLLILSHLSVCQVI*LDSLNTLLRSCQLI Trigger: AATAAGCTGGCAACTCCTCAAAAGAGTATTCAAACTATCCAACCATATTACTTGGCATACAGAAAGATGAGACAAGATGAGCAGCAGAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056042.6 ENSMUST00000120490.8 |
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| CDS TCA 90 bp | ATGATATTATCAACATCACAATATTGTTGCTTCTCCATGACGATGTaGTATCCAGCACCATATATTTGTTTCAGGAAGACTGAAGAGCCA | + |
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Preference number: 5 (lower is better) Translates to: MILSTSQYCCFSMTM*YPAPYICFRKTEEP Trigger: TGGCTCTTCAGTCTTCCTGAAACAAATATATGGTGCTGGATATCACATCGTCATGGAGAAGCAACAATATTGTGATGTTGATAATATCAT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056042.6 ENSMUST00000120490.8 |
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| CDS GCA 90 bp | AGTTTTACTGAAGAACGTGCTAACCATAAAGGCAAAGCATATGGATaGGATAGCATAACATGTAAGAAAGACAAAGATGAAACTACAGTC | + |
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Preference number: 5 (lower is better) Translates to: SFTEERANHKGKAYG*DSITCKKDKDETTV Trigger: GACTGTAGTTTCATCTTTGTCTTTCTTACATGTTATGCTATCGCATCCATATGCTTTGCCTTTATGGTTAGCACGTTCTTCAGTAAAACT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056042.6 ENSMUST00000120490.8 |
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| CDS CAA 90 bp | GACACTGGGTCCATGCCGGATGATGGCTCATCAAGTATCACTACCTaGGAGCCCGCCATAAGTGCTAAAACGATAGAGAGTTTGCGTCTC | + |
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Preference number: 6 (lower is better) Translates to: DTGSMPDDGSSSITT*EPAISAKTIESLRL Trigger: GAGACGCAAACTCTCTATCGTTTTAGCACTTATGGCGGGCTCCAAGGTAGTGATACTTGATGAGCCATCATCCGGCATGGACCCAGTGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056042.6 ENSMUST00000120490.8 |
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| CDS CCA 72 bp | GTGCTTAGCCTACGTTTGCTTCCAGCACTGTACGTGTaGATAAACTGGTCAGCAATGGGTTCCAGGTGCACT | + |
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Preference number: 6 (lower is better) Translates to: VLSLRLLPALYV*INWSAMGSRCT Trigger: AGTGCACCTGGAACCCATTGCTGACCAGTTTATCCACACGTACAGTGCTGGAAGCAAACGTAGGCTAAGCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056042.6 ENSMUST00000120490.8 |
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| CDS CAA 90 bp | ACTGAAGACTTTCCCATTAGGGCGATAGCAGTGCTTAGCCTACGTTaGCTTCCAGCACTGTACGTGTGGATAAACTGGTCAGCAATGGGT | + |
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Preference number: 6 (lower is better) Translates to: TEDFPIRAIAVLSLR*LPALYVWINWSAMG Trigger: ACCCATTGCTGACCAGTTTATCCACACGTACAGTGCTGGAAGCAAACGTAGGCTAAGCACTGCTATCGCCCTAATGGGAAAGTCTTCAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056042.6 ENSMUST00000120490.8 |
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| CDS CCA 72 bp | GTCTCGTTTTCCAGCCTAACTTGTCTGGCCACCAGATaGTCCTCTGTGCACCAACAAAACGCAAGTGATATT | + |
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Preference number: 6 (lower is better) Translates to: VSFSSLTCLATR*SSVHQQNASDI Trigger: AATATCACTTGCGTTTTGTTGGTGCACAGAGGACCATCTGGTGGCCAGACAAGTTAGGCTGGAAAACGAGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056042.6 ENSMUST00000120490.8 |
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| CDS CCA 72 bp | ATGTGCTTGGCTTGGCTGGTTCTTTCAGTTACTGTCTaGATACTAAAGGACCCGACCACCACAGAAATGCCA | + |
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Preference number: 6 (lower is better) Translates to: MCLAWLVLSVTV*ILKDPTTTEMP Trigger: TGGCATTTCTGTGGTGGTCGGGTCCTTTAGTATCCAGACAGTAACTGAAAGAACCAGCCAAGCCAAGCACAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056042.6 ENSMUST00000120490.8 |
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| CDS CAA 72 bp | TTGGAGCCCGCCATAAGTGCTAAAACGATAGAGAGTTaGCGTCTCACTCCTCCACTCGCTGAACCTGATAAT | + |
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Preference number: 6 (lower is better) Translates to: LEPAISAKTIES*RLTPPLAEPDN Trigger: ATTATCAGGTTCAGCGAGTGGAGGAGTGAGACGCAAACTCTCTATCGTTTTAGCACTTATGGCGGGCTCCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056042.6 ENSMUST00000120490.8 |
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| CDS CAA 72 bp | TTTCCCATTAGGGCGATAGCAGTGCTTAGCCTACGTTaGCTTCCAGCACTGTACGTGTGGATAAACTGGTCA | + |
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Preference number: 6 (lower is better) Translates to: FPIRAIAVLSLR*LPALYVWINWS Trigger: TGACCAGTTTATCCACACGTACAGTGCTGGAAGCAAACGTAGGCTAAGCACTGCTATCGCCCTAATGGGAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056042.6 ENSMUST00000120490.8 |
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| CDS TCA 72 bp | ACAGCTTTTTCCCAGCACTGCTTTCATGATACAGCATaGTGCTCTTGTCCAAAGCATGCTGTACTGCCAGGA | + |
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Preference number: 6 (lower is better) Translates to: TAFSQHCFHDTA*CSCPKHAVLPG Trigger: TCCTGGCAGTACAGCATGCTTTGGACAAGAGCATCATGCTGTATCATGAAAGCAGTGCTGGGAAAAAGCTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000056042.6 ENSMUST00000120490.8 |
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| CDS TCA 72 bp | AACCAATATGAGCGCATAAGGAAAAAGTACCATGGTTaGGGCACACCACACTGTCCAGGAAAGACGGCTTCT | + |
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Preference number: 6 (lower is better) Translates to: NQYERIRKKYHG*GTPHCPGKTAS Trigger: AGAAGCCGTCTTTCCTGGACAGTGTGGTGTGCCTCAACCATGGTACTTTTTCCTTATGCGCTCATATTGGTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000056042.6 ENSMUST00000120490.8 |
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| CDS CAA 72 bp | TACAGGCACTATGTTCGAACCGTAATGAGGGAGAGGTaGCGGCTTATTGAAGACAGTAATGGAAGCATCAGG | + |
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Preference number: 6 (lower is better) Translates to: YRHYVRTVMRER*RLIEDSNGSIR Trigger: CCTGATGCTTCCATTACTGTCTTCAATAAGCCGCAACCTCTCCCTCATTACGGTTCGAACATAGTGCCTGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056042.6 ENSMUST00000120490.8 |
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| CDS CAA 72 bp | GTATGCACACAGACTCCAGTCAGAAACTGGATGTGCTaGGCTTGGCTGGTTCTTTCAGTTACTGTCTGGATA | + |
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Preference number: 6 (lower is better) Translates to: VCTQTPVRNWMC*AWLVLSVTVWI Trigger: TATCCAGACAGTAACTGAAAGAACCAGCCAAGCCAAGCACATCCAGTTTCTGACTGGAGTCTGTGTGCATAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056042.6 ENSMUST00000120490.8 |
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| CDS CAA 90 bp | TTCGATTGTGTTTATAATGCTGAAGGATATCCCAGGTGGCTCTTCTaGACACTGGGTCCATGCCGGATGATGGCTCATCAAGTATCACTA | + |
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Preference number: 6 (lower is better) Translates to: FDCVYNAEGYPRWLF*TLGPCRMMAHQVSL Trigger: TAGTGATACTTGATGAGCCATCATCCGGCATGGACCCAGTGTCAAGAAGAGCCACCTGGGATATCCTTCAGCATTATAAACACAATCGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056042.6 ENSMUST00000120490.8 |
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| CDS TCA 72 bp | GTGGATAAACTGGTCAGCAATGGGTTCCAGGTGCACTaGATGCAGAAAGGCTTCCACATACTCATTAATGTC | + |
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Preference number: 6 (lower is better) Translates to: VDKLVSNGFQVH*MQKGFHILINV Trigger: GACATTAATGAGTATGTGGAAGCCTTTCTGCATTCAGTGCACCTGGAACCCATTGCTGACCAGTTTATCCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056042.6 ENSMUST00000120490.8 |
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| CDS GCA 72 bp | ATACAGCATGATGCTCTTGTCCAAAGCATGCTGTACTaGCAGGAATCCTTCCTTAATATACCCAGGACTTCC | + |
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Preference number: 6 (lower is better) Translates to: IQHDALVQSMLY*QESFLNIPRTS Trigger: GGAAGTCCTGGGTATATTAAGGAAGGATTCCTGGCAGTACAGCATGCTTTGGACAAGAGCATCATGCTGTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056042.6 ENSMUST00000120490.8 |
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| CDS GCA 72 bp | TTTCCTGCCCCATTGTGTCCCAGAAGAACAGTGACCTaGCCCTCATATATGTTCAGTGACAAGTTGTTTACT | + |
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Preference number: 6 (lower is better) Translates to: FPAPLCPRRTVT*PSYMFSDKLFT Trigger: AGTAAACAACTTGTCACTGAACATATATGAGGGGCAGGTCACTGTTCTTCTGGGACACAATGGGGCAGGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056042.6 ENSMUST00000120490.8 |
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| CDS GCA 72 bp | TACGTGTGGATAAACTGGTCAGCAATGGGTTCCAGGTaGACTGAATGCAGAAAGGCTTCCACATACTCATTA | + |
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Preference number: 6 (lower is better) Translates to: YVWINWSAMGSR*TECRKASTYSL Trigger: TAATGAGTATGTGGAAGCCTTTCTGCATTCAGTGCACCTGGAACCCATTGCTGACCAGTTTATCCACACGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056042.6 ENSMUST00000120490.8 |
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| CDS CCA 72 bp | ACACAGACTCCAGTCAGAAACTGGATGTGCTTGGCTTaGCTGGTTCTTTCAGTTACTGTCTGGATACTAAAG | + |
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Preference number: 6 (lower is better) Translates to: TQTPVRNWMCLA*LVLSVTVWILK Trigger: CTTTAGTATCCAGACAGTAACTGAAAGAACCAGCCAAGCCAAGCACATCCAGTTTCTGACTGGAGTCTGTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056042.6 ENSMUST00000120490.8 |
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| CDS CAA 72 bp | CACACAGACTCCAGTCAGAAACTGGATGTGCTTGGCTaGGCTGGTTCTTTCAGTTACTGTCTGGATACTAAA | + |
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Preference number: 6 (lower is better) Translates to: HTDSSQKLDVLG*AGSFSYCLDTK Trigger: TTTAGTATCCAGACAGTAACTGAAAGAACCAGCCAAGCCAAGCACATCCAGTTTCTGACTGGAGTCTGTGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056042.6 ENSMUST00000120490.8 |
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| CDS GCA 72 bp | AGCCTCATAGCAGTTATGTACTATGGGGGTGCACTTTaGCTCTTCTGTAGTCTTTCTAATTTTTGGTTTGCC | + |
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Preference number: 6 (lower is better) Translates to: SLIAVMYYGGAL*LFCSLSNFWFA Trigger: GGCAAACCAAAAATTAGAAAGACTACAGAAGAGGCAAAGTGCACCCCCATAGTACATAACTGCTATGAGGCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000056042.6 ENSMUST00000120490.8 |
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| CDS GCA 72 bp | TTTAAATTCCTTGTGCAAATGCATGATATGGATTCCTaGCTCCAAGTTGGGAGGTTCAGCCTCATAGCAGTT | + |
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Preference number: 6 (lower is better) Translates to: FKFLVQMHDMDS*LQVGRFSLIAV Trigger: AACTGCTATGAGGCTGAACCTCCCAACTTGGAGGCAGGAATCCATATCATGCATTTGCACAAGGAATTTAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056042.6 ENSMUST00000120490.8 |
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| CDS TCA 72 bp | CATCAAACAAAAGCATTCCAAGCATATAGCCAAAGTTaGGGTTATCCTCAAGATTGGCTGGTGTCCAAAGGT | + |
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Preference number: 6 (lower is better) Translates to: HQTKAFQAYSQS*GYPQDWLVSKG Trigger: ACCTTTGGACACCAGCCAATCTTGAGGATAACCTCAACTTTGGCTATATGCTTGGAATGCTTTTGTTTGATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056042.6 ENSMUST00000120490.8 |
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| CDS TCA 72 bp | CAGCACAGATTCAGTCTGAGGACAGTAACCAATTCTTaGCCTAATCTTTCTTGGGGTTCTAGTGACACTATT | + |
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Preference number: 6 (lower is better) Translates to: QHRFSLRTVTNS*PNLSWGSSDTI Trigger: AATAGTGTCACTAGAACCCCAAGAAAGATTAGGTCAAGAATTGGTTACTGTCCTCAGACTGAATCTGTGCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056042.6 ENSMUST00000120490.8 |
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| CDS GCA 72 bp | CATTGCAAGGTTGTAACTAGGCAATGCCATCAAAATTaGCCTTATGAGGATGTGGACAAAGTTAGGAAAGTC | + |
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Preference number: 6 (lower is better) Translates to: HCKVVTRQCHQN*PYEDVDKVRKV Trigger: GACTTTCCTAACTTTGTCCACATCCTCATAAGGGCAATTTTGATGGCATTGCCTAGTTACAACCTTGCAATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056042.6 ENSMUST00000120490.8 |
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| CDS GCA 72 bp | CTTGCTGATACTCATTGCAAGGTTGTAACTAGGCAATaGCATCAAAATTGCCCTTATGAGGATGTGGACAAA | + |
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Preference number: 6 (lower is better) Translates to: LADTHCKVVTRQ*HQNCPYEDVDK Trigger: TTTGTCCACATCCTCATAAGGGCAATTTTGATGGCATTGCCTAGTTACAACCTTGCAATGAGTATCAGCAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056042.6 ENSMUST00000120490.8 |
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| CDS GCA 72 bp | AGGTTATCCTCAAGATTGGCTGGTGTCCAAAGGTTGTaGCATTTAACACCAATCTCTTGTATTTCCAACTTG | + |
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Preference number: 6 (lower is better) Translates to: RLSSRLAGVQRL*HLTPISCISNL Trigger: CAAGTTGGAAATACAAGAGATTGGTGTTAAATGGCACAACCTTTGGACACCAGCCAATCTTGAGGATAACCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120490.8 |
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| CDS CAA 72 bp | TTGAGGTTATCCTCAAGATTGGCTGGTGTCCAAAGGTaGTGCCATTTAACACCAATCTCTTGTATTTCCAAC | + |
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Preference number: 6 (lower is better) Translates to: LRLSSRLAGVQR*CHLTPISCISN Trigger: GTTGGAAATACAAGAGATTGGTGTTAAATGGCACAACCTTTGGACACCAGCCAATCTTGAGGATAACCTCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120490.8 |
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| CDS GCA 72 bp | AGGTTATCCTCAAGATTGGCTGGTGTCCAAAGGTTGTaGCATTTAACACCAATCTTGTATTCCAACTTGATT | + |
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Preference number: 6 (lower is better) Translates to: RLSSRLAGVQRL*HLTPILYSNLI Trigger: AATCAAGTTGGAATACAAGATTGGTGTTAAATGGCACAACCTTTGGACACCAGCCAATCTTGAGGATAACCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056042.6 |
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| CDS GCA 72 bp | AATGTTATATCCATTAATATAGGCCTTTACCCTGGATaGATATGGATACACACCTGTGAGAACAGACAGGGT | + |
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Preference number: 6 (lower is better) Translates to: NVISINIGLYPG*IWIHTCENRQG Trigger: ACCCTGTCTGTTCTCACAGGTGTGTATCCATATGCATCCAGGGTAAAGGCCTATATTAATGGATATAACATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056042.6 ENSMUST00000120490.8 |
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| CDS CAA 72 bp | GAAGCATCAGGGCCAGAAAGTGTCATAAAAAGAATGTaGTCTAATATTGACAGAGATATTGCAGGTGAGTGG | + |
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Preference number: 6 (lower is better) Translates to: EASGPESVIKRM*SNIDRDIAGEW Trigger: CCACTCACCTGCAATATCTCTGTCAATATTAGACAACATTCTTTTTATGACACTTTCTGGCCCTGATGCTTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000056042.6 ENSMUST00000120490.8 |
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| CDS CAA 90 bp | ACAGTAATGGAAGCATCAGGGCCAGAAAGTGTCATAAAAAGAATGTaGTCTAATATTGACAGAGATATTGCAGGTGAGTGGTATGCTTCA | + |
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Preference number: 6 (lower is better) Translates to: TVMEASGPESVIKRM*SNIDRDIAGEWYAS Trigger: TGAAGCATACCACTCACCTGCAATATCTCTGTCAATATTAGACAACATTCTTTTTATGACACTTTCTGGCCCTGATGCTTCCATTACTGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000056042.6 ENSMUST00000120490.8 |
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| CDS TCA 72 bp | AAGCCACAGTCAAAAACAATGGCAGCCAGTACTTTCTaGGACATATTATCAAAGAGAATGTACTCCTCAAAC | + |
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Preference number: 6 (lower is better) Translates to: KPQSKTMAASTF*DILSKRMYSSN Trigger: GTTTGAGGAGTACATTCTCTTTGATAATATGTCTCAGAAAGTACTGGCTGCCATTGTTTTTGACTGTGGCTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000056042.6 ENSMUST00000120490.8 |
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| CDS CCA 72 bp | AATTGCAAATACCTTTCCCCAGTAGATTTCCTTGCTTaGAATATAGTAGCCAATAGTCCCATGAAATTCCTG | + |
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Preference number: 6 (lower is better) Translates to: NCKYLSPVDFLA*NIVANSPMKFL Trigger: CAGGAATTTCATGGGACTATTGGCTACTATATTCCAAGCAAGGAAATCTACTGGGGAAAGGTATTTGCAATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056042.6 ENSMUST00000120490.8 |
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| CDS CAA 72 bp | GCTTCTGAAGGAAAACCTCGAACTTTGATAGTGGTGTaGAGATTCCTCTTTACATCCTCAATGATTTCTCTT | + |
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Preference number: 6 (lower is better) Translates to: ASEGKPRTLIVV*RFLFTSSMISL Trigger: AAGAGAAATCATTGAGGATGTAAAGAGGAATCTCAACACCACTATCAAAGTTCGAGGTTTTCCTTCAGAAGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056042.6 ENSMUST00000120490.8 |
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| CDS TCA 72 bp | TCAACATCACAATATTGTTGCTTCTCCATGACGATGTaGTATCCAGCACCATATATTTGTTTCAGGAAGACT | + |
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Preference number: 6 (lower is better) Translates to: STSQYCCFSMTM*YPAPYICFRKT Trigger: AGTCTTCCTGAAACAAATATATGGTGCTGGATATCACATCGTCATGGAGAAGCAACAATATTGTGATGTTGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056042.6 ENSMUST00000120490.8 |
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| CDS GCA 72 bp | GAAGAACGTGCTAACCATAAAGGCAAAGCATATGGATaGGATAGCATAACATGTAAGAAAGACAAAGATGAA | + |
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Preference number: 6 (lower is better) Translates to: EERANHKGKAYG*DSITCKKDKDE Trigger: TTCATCTTTGTCTTTCTTACATGTTATGCTATCGCATCCATATGCTTTGCCTTTATGGTTAGCACGTTCTTC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056042.6 ENSMUST00000120490.8 |
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| CDS GCA 72 bp | CACATTCTGCTGCTCATCTTGTCTCATCTTTCTGTATaGCAAGTAATATGGTTGGATAGTTTGAATACTCTT | + |
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Preference number: 6 (lower is better) Translates to: HILLLILSHLSV*QVIWLDSLNTL Trigger: AAGAGTATTCAAACTATCCAACCATATTACTTGGCATACAGAAAGATGAGACAAGATGAGCAGCAGAATGTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056042.6 ENSMUST00000120490.8 |
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| CDS CAA 72 bp | GCTGGTGTCCAAAGGTTGTGCCATTTAACACCAATCTaGTATTCCAACTTGATTAAGATATTAATTCCCAGT | + |
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Preference number: 6 (lower is better) Translates to: AGVQRLCHLTPI*YSNLIKILIPS Trigger: ACTGGGAATTAATATCTTAATCAAGTTGGAATACAAGATTGGTGTTAAATGGCACAACCTTTGGACACCAGC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056042.6 |
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| CDS CAA 72 bp | CTGAATCATTGCAATGATATTATCAACATCACAATATaGTTGCTTCTCCATGACGATGTGATATCCAGCACC | + |
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Preference number: 6 (lower is better) Translates to: LNHCNDIINITI*LLLHDDVISST Trigger: GGTGCTGGATATCACATCGTCATGGAGAAGCAACAATATTGTGATGTTGATAATATCATTGCAATGATTCAG 38% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056042.6 ENSMUST00000120490.8 |
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| CDS CAA 72 bp | ATCTTGTCTCATCTTTCTGTATGCCAAGTAATATGGTaGGATAGTTTGAATACTCTTTTGAGGAGTTGCCAG | + |
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Preference number: 6 (lower is better) Translates to: ILSHLSVCQVIW*DSLNTLLRSCQ Trigger: CTGGCAACTCCTCAAAAGAGTATTCAAACTATCCAACCATATTACTTGGCATACAGAAAGATGAGACAAGAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056042.6 ENSMUST00000120490.8 |
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| CDS CAA 90 bp | CTTTCTGTATGCCAAGTAATATGGTTGGATAGTTTGAATACTCTTTaGAGGAGTTGCCAGCTTATTGACCTTAACAAAAACCTCTTCCAT | + |
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Preference number: 6 (lower is better) Translates to: LSVCQVIWLDSLNTL*RSCQLIDLNKNLFH Trigger: ATGGAAGAGGTTTTTGTTAAGGTCAATAAGCTGGCAACTCCTCAAAAGAGTATTCAAACTATCCAACCATATTACTTGGCATACAGAAAG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000056042.6 ENSMUST00000120490.8 |
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| CDS CAA 90 bp | TGGTTTGCTATAATTTATGGGCATATTCACATTCTGCTGCTCATCTaGTCTCATCTTTCTGTATGCCAAGTAATATGGTTGGATAGTTTG | + |
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Preference number: 6 (lower is better) Translates to: WFAIIYGHIHILLLI*SHLSVCQVIWLDSL Trigger: CAAACTATCCAACCATATTACTTGGCATACAGAAAGATGAGACAAGATGAGCAGCAGAATGTGAATATGCCCATAAATTATAGCAAACCA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056042.6 ENSMUST00000120490.8 |
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| CDS CAA 90 bp | AACATGCTGCTGAATCATTGCAATGATATTATCAACATCACAATATaGTTGCTTCTCCATGACGATGTGATATCCAGCACCATATATTTG | + |
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Preference number: 6 (lower is better) Translates to: NMLLNHCNDIINITI*LLLHDDVISSTIYL Trigger: CAAATATATGGTGCTGGATATCACATCGTCATGGAGAAGCAACAATATTGTGATGTTGATAATATCATTGCAATGATTCAGCAGCATGTT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056042.6 ENSMUST00000120490.8 |
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| CDS GCA 72 bp | ATATGGTTGGATAGTTTGAATACTCTTTTGAGGAGTTaGCAGCTTATTGACCTTAACAAAAACCTCTTCCAT | + |
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Preference number: 6 (lower is better) Translates to: IWLDSLNTLLRS*QLIDLNKNLFH Trigger: ATGGAAGAGGTTTTTGTTAAGGTCAATAAGCTGGCAACTCCTCAAAAGAGTATTCAAACTATCCAACCATAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000056042.6 ENSMUST00000120490.8 |
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| CDS CCA 72 bp | TTTTATAAACAGGGAATAGAATTGCTGGCGGTAAAGTaGAACCCCAGTGTTAAATTTAACAGTAGCAATTTC | + |
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Preference number: 6 (lower is better) Translates to: FYKQGIELLAVK*NPSVKFNSSNF Trigger: GAAATTGCTACTGTTAAATTTAACACTGGGGTTCCACTTTACCGCCAGCAATTCTATTCCCTGTTTATAAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056042.6 ENSMUST00000120490.8 |
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| CDS CAA 72 bp | TGCCAAGTAATATGGTTGGATAGTTTGAATACTCTTTaGAGGAGTTGCCAGCTTATTGACCTTAACAAAAAC | + |
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Preference number: 6 (lower is better) Translates to: CQVIWLDSLNTL*RSCQLIDLNKN Trigger: GTTTTTGTTAAGGTCAATAAGCTGGCAACTCCTCAAAAGAGTATTCAAACTATCCAACCATATTACTTGGCA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000056042.6 ENSMUST00000120490.8 |
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| CDS CAA 72 bp | ATAACTACTATTATCTGCAGTAGCATGAACTTCCAGTaGCGGCTAATGAATAGTGCTCTTTTTATAAACAGG | + |
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Preference number: 6 (lower is better) Translates to: ITTIICSSMNFQ*RLMNSALFINR Trigger: CCTGTTTATAAAAAGAGCACTATTCATTAGCCGCAACTGGAAGTTCATGCTACTGCAGATAATAGTAGTTAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000056042.6 ENSMUST00000120490.8 |
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| CDS CAA 72 bp | GACAGAGATATTGCAGGTGAGTGGTATGCTTCATTATaGAAGAAAATAGTGAGCACTGTTTTATTTCTCTCA | + |
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Preference number: 6 (lower is better) Translates to: DRDIAGEWYASL*KKIVSTVLFLS Trigger: TGAGAGAAATAAAACAGTGCTCACTATTTTCTTCAATAATGAAGCATACCACTCACCTGCAATATCTCTGTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056042.6 ENSMUST00000120490.8 |
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| CDS GCA 72 bp | GAAATGATACGGTCCAGCAATATTCATATCAGTAAGTaGACGGAATATCAACAACATTATTACAAACAGCAA | + |
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Preference number: 6 (lower is better) Translates to: EMIRSSNIHISK*TEYQQHYYKQQ Trigger: TTGCTGTTTGTAATAATGTTGTTGATATTCCGTGCACTTACTGATATGAATATTGCTGGACCGTATCATTTC 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056042.6 ENSMUST00000120490.8 |
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| CDS CAA 72 bp | AATCATTGCAATGATATTATCAACATCACAATATTGTaGCTTCTCCATGACGATGTGATATCCAGCACCATA | + |
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Preference number: 6 (lower is better) Translates to: NHCNDIINITIL*LLHDDVISSTI Trigger: TATGGTGCTGGATATCACATCGTCATGGAGAAGCAACAATATTGTGATGTTGATAATATCATTGCAATGATT 35% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056042.6 ENSMUST00000120490.8 |
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