RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ABCA15 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000054746

Ensembl transcript IDs: ENSMUST00000076272.5, ENSMUST00000121265.7, ENSMUST00000207220.2

Found 206 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS-3UTR TCA 90 bp CAAATATATTTACATGAAGATTCACAAGCACAGGATGACCTTCCCATGGACCCAAGAGCAGCAGCGCATTaGGCAGGAAGGTTTGGGTGG +
Preference number: 4 (lower is better)
Translates to: QIYLHEDSQAQDDLPMDPRAAAH*AGRFGW
Trigger: CCACCCAAACCTTCCTGCTCAATGCGCTGCTGCTCT...TGGGTCCATGGGAAGGTCATCCTGTGCTTGTGAATCTTCATGTAAATATATTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076272.5
ENSMUST00000121265.7
CDS-3UTR TCA 90 bp ATATATTTACATGAAGATTCACAAGCACAGGATGACCTTCCCATGGACCCAGATAGAGCAGCAGCGCATTaGGCAGGAAGGTTTGGGTGG +
Preference number: 4 (lower is better)
Translates to: IYLHEDSQAQDDLPMDPDRAAAH*AGRFGW
Trigger: CCACCCAAACCTTCCTGCTCAATGCGCTGCTGCTCT...ATCTGGGTCCATGGGAAGGTCATCCTGTGCTTGTGAATCTTCATGTAAATATAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076272.5
ENSMUST00000121265.7
CDS-3UTR TCA 90 bp TATTTACATGAAGATTCACAAGCACAGGATGACCTTCCCATGGACCCAGATGTAATGCGCTCAAAGCTCTaGTGCATTGCAACAGCTGGG +
Preference number: 4 (lower is better)
Translates to: YLHEDSQAQDDLPMDPDVMRSKL*CIATAG
Trigger: CCCAGCTGTTGCAATGCATCAGAGCTTTGAGCGCAT...TACATCTGGGTCCATGGGAAGGTCATCCTGTGCTTGTGAATCTTCATGTAAATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076272.5
ENSMUST00000121265.7
CDS-3UTR TCA 90 bp TATTTACATGAAGATTCACAAGCACAGGATGACCTTCCCATGGACCCAGATGTAATCCAGGAAGATAACTaGGGGCTTTCCCATCGTGGC +
Preference number: 4 (lower is better)
Translates to: YLHEDSQAQDDLPMDPDVIQEDN*GLSHRG
Trigger: GCCACGATGGGAAAGCCCTCAGTTATCTTCCTGGAT...TACATCTGGGTCCATGGGAAGGTCATCCTGTGCTTGTGAATCTTCATGTAAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076272.5
ENSMUST00000121265.7
CDS-3UTR TCA 90 bp TATTTACATGAAGATTCACAAGCACAGGATGACCTTCCCATGGACCCAGATGTACACCATGATGTAGCATaGTGGCCTTGTCTAGGGCAT +
Preference number: 4 (lower is better)
Translates to: YLHEDSQAQDDLPMDPDVHHDVA*WPCLGH
Trigger: ATGCCCTAGACAAGGCCATCATGCTACATCATGGTG...TACATCTGGGTCCATGGGAAGGTCATCCTGTGCTTGTGAATCTTCATGTAAATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076272.5
ENSMUST00000121265.7
CDS-3UTR TCA 90 bp ATATATTTACATGAAGATTCACAAGCACAGGATGACCTTCCCATGGACCCAGATGCATCAGCTCCACCATaGTGTAGCATGATGGCCTTG +
Preference number: 4 (lower is better)
Translates to: IYLHEDSQAQDDLPMDPDASAPP*CSMMAL
Trigger: CAAGGCCATCATGCTACATCATGGTGGAGCTGATGC...ATCTGGGTCCATGGGAAGGTCATCCTGTGCTTGTGAATCTTCATGTAAATATAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076272.5
ENSMUST00000121265.7
CDS-3UTR TCA 90 bp CAAATATATTTACATGAAGATTCACAAGCACAGGATGACCTTCCCATGGACCCAGCATCAGCTCCACCATaGTGTAGCATGATGGCCTTG +
Preference number: 4 (lower is better)
Translates to: QIYLHEDSQAQDDLPMDPASAPP*CSMMAL
Trigger: CAAGGCCATCATGCTACATCATGGTGGAGCTGATGC...TGGGTCCATGGGAAGGTCATCCTGTGCTTGTGAATCTTCATGTAAATATATTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076272.5
ENSMUST00000121265.7
CDS-3UTR TCA 90 bp CAAATATATTTACATGAAGATTCACAAGCACAGGATGACCTTCCCATGGACCCAATGCGCTCAAAGCTCTaGTGCATTGCAACAGCTGGG +
Preference number: 4 (lower is better)
Translates to: QIYLHEDSQAQDDLPMDPMRSKL*CIATAG
Trigger: CCCAGCTGTTGCAATGCATCAGAGCTTTGAGCGCAT...TGGGTCCATGGGAAGGTCATCCTGTGCTTGTGAATCTTCATGTAAATATATTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076272.5
ENSMUST00000121265.7
CDS-3UTR TCA 90 bp ATATATTTACATGAAGATTCACAAGCACAGGATGACCTTCCCATGGACCCAGATCGGAGGATAGAGACCTaGGAGGATGGACAGAGTAGT +
Preference number: 4 (lower is better)
Translates to: IYLHEDSQAQDDLPMDPDRRIET*EDGQSS
Trigger: ACTACTCTGTCCATCCTCTCAGGTCTCTATCCTCCG...ATCTGGGTCCATGGGAAGGTCATCCTGTGCTTGTGAATCTTCATGTAAATATAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076272.5
ENSMUST00000121265.7
CDS-3UTR TCA 90 bp TATTTACATGAAGATTCACAAGCACAGGATGACCTTCCCATGGACCCAGATGTAAGCCCAAGGAATTCCTaGCTTGATCCATATGCTGGG +
Preference number: 4 (lower is better)
Translates to: YLHEDSQAQDDLPMDPDVSPRNS*LDPYAG
Trigger: CCCAGCATATGGATCAAGTCAGGAATTCCTTGGGCT...TACATCTGGGTCCATGGGAAGGTCATCCTGTGCTTGTGAATCTTCATGTAAATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076272.5
ENSMUST00000121265.7
CDS-3UTR TCA 90 bp ATATATTTACATGAAGATTCACAAGCACAGGATGACCTTCCCATGGACCCAGATATCCAGGAAGATAACTaGGGGCTTTCCCATCGTGGC +
Preference number: 4 (lower is better)
Translates to: IYLHEDSQAQDDLPMDPDIQEDN*GLSHRG
Trigger: GCCACGATGGGAAAGCCCTCAGTTATCTTCCTGGAT...ATCTGGGTCCATGGGAAGGTCATCCTGTGCTTGTGAATCTTCATGTAAATATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076272.5
ENSMUST00000121265.7
CDS-3UTR GCA 90 bp ATATATTTACATGAAGATTCACAAGCACAGGATGACCTTCCCATGGACCCAGATTTGTCTAGGGCATGTTaGACAGCCAGGAACCCTTCC +
Preference number: 4 (lower is better)
Translates to: IYLHEDSQAQDDLPMDPDLSRAC*TARNPS
Trigger: GGAAGGGTTCCTGGCTGTGCAACATGCCCTAGACAA...ATCTGGGTCCATGGGAAGGTCATCCTGTGCTTGTGAATCTTCATGTAAATATAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076272.5
ENSMUST00000121265.7
CDS-3UTR GCA 90 bp TATTTACATGAAGATTCACAAGCACAGGATGACCTTCCCATGGACCCAGATGTATCTGCTTGGATGGCATaGGCTCAAAGCTCTGATGCA +
Preference number: 4 (lower is better)
Translates to: YLHEDSQAQDDLPMDPDVSAWMA*AQSSDA
Trigger: TGCATCAGAGCTTTGAGCGCATGCCATCCAAGCAGA...TACATCTGGGTCCATGGGAAGGTCATCCTGTGCTTGTGAATCTTCATGTAAATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076272.5
ENSMUST00000121265.7
CDS-3UTR GCA 90 bp CAAATATATTTACATGAAGATTCACAAGCACAGGATGACCTTCCCATGGACCCACGAGTTTGCGCTTCATaGCTCCGCTCAGTGATTTCG +
Preference number: 4 (lower is better)
Translates to: QIYLHEDSQAQDDLPMDPRVCAS*LRSVIS
Trigger: CGAAATCACTGAGCGGAGGCATGAAGCGCAAACTCG...TGGGTCCATGGGAAGGTCATCCTGTGCTTGTGAATCTTCATGTAAATATATTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076272.5
ENSMUST00000121265.7
CDS-3UTR GCA 90 bp TATTTACATGAAGATTCACAAGCACAGGATGACCTTCCCATGGACCCAGATGTATCGTGGCAATGGCAGTaGTCAGCCTACGTTTGTTTC +
Preference number: 4 (lower is better)
Translates to: YLHEDSQAQDDLPMDPDVSWQWQ*SAYVCF
Trigger: GAAACAAACGTAGGCTGAGCACTGCCATTGCCACGA...TACATCTGGGTCCATGGGAAGGTCATCCTGTGCTTGTGAATCTTCATGTAAATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076272.5
ENSMUST00000121265.7
CDS-3UTR CCA 90 bp TATTTACATGAAGATTCACAAGCACAGGATGACCTTCCCATGGACCCAGATGTAGCCAGTACACAAGGATaGAGACCCCACTCAGAAACT +
Preference number: 4 (lower is better)
Translates to: YLHEDSQAQDDLPMDPDVASTQG*RPHSET
Trigger: AGTTTCTGAGTGGGGTCTCCATCCTTGTGTACTGGC...TACATCTGGGTCCATGGGAAGGTCATCCTGTGCTTGTGAATCTTCATGTAAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076272.5
ENSMUST00000121265.7
CDS-3UTR CCA 90 bp CAAATATATTTACATGAAGATTCACAAGCACAGGATGACCTTCCCATGGACCCATTCCCATCGTGGCAATaGCAGTGCTCAGCCTACGTT +
Preference number: 4 (lower is better)
Translates to: QIYLHEDSQAQDDLPMDPFPSWQ*QCSAYV
Trigger: AACGTAGGCTGAGCACTGCCATTGCCACGATGGGAA...TGGGTCCATGGGAAGGTCATCCTGTGCTTGTGAATCTTCATGTAAATATATTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076272.5
ENSMUST00000121265.7
CDS-3UTR CCA 90 bp ATATATTTACATGAAGATTCACAAGCACAGGATGACCTTCCCATGGACCCAGATTTCCCATCGTGGCAATaGCAGTGCTCAGCCTACGTT +
Preference number: 4 (lower is better)
Translates to: IYLHEDSQAQDDLPMDPDFPSWQ*QCSAYV
Trigger: AACGTAGGCTGAGCACTGCCATTGCCACGATGGGAA...ATCTGGGTCCATGGGAAGGTCATCCTGTGCTTGTGAATCTTCATGTAAATATAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076272.5
ENSMUST00000121265.7
CDS-3UTR TCA 90 bp CAAATATATTTACATGAAGATTCACAAGCACAGGATGACCTTCCCATGGACCCACACCATGATGTAGCATaGTGGCCTTGTCTAGGGCAT +
Preference number: 4 (lower is better)
Translates to: QIYLHEDSQAQDDLPMDPHHDVA*WPCLGH
Trigger: ATGCCCTAGACAAGGCCATCATGCTACATCATGGTG...TGGGTCCATGGGAAGGTCATCCTGTGCTTGTGAATCTTCATGTAAATATATTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076272.5
ENSMUST00000121265.7
CDS-3UTR TCA 90 bp ATATATTTACATGAAGATTCACAAGCACAGGATGACCTTCCCATGGACCCAGATAGCCCAAGGAATTCCTaGCTTGATCCATATGCTGGG +
Preference number: 4 (lower is better)
Translates to: IYLHEDSQAQDDLPMDPDSPRNS*LDPYAG
Trigger: CCCAGCATATGGATCAAGTCAGGAATTCCTTGGGCT...ATCTGGGTCCATGGGAAGGTCATCCTGTGCTTGTGAATCTTCATGTAAATATAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076272.5
ENSMUST00000121265.7
CDS-3UTR TCA 90 bp CAAATATATTTACATGAAGATTCACAAGCACAGGATGACCTTCCCATGGACCCAAAGGTTCCTTCACCATaGCTAGGTGGCTTCCAACAC +
Preference number: 4 (lower is better)
Translates to: QIYLHEDSQAQDDLPMDPKVPSP*LGGFQH
Trigger: GTGTTGGAAGCCACCTAGTCATGGTGAAGGAACCTT...TGGGTCCATGGGAAGGTCATCCTGTGCTTGTGAATCTTCATGTAAATATATTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076272.5
ENSMUST00000121265.7
CDS-3UTR TCA 90 bp ATATATTTACATGAAGATTCACAAGCACAGGATGACCTTCCCATGGACCCAGATAAGGTTCCTTCACCATaGCTAGGTGGCTTCCAACAC +
Preference number: 4 (lower is better)
Translates to: IYLHEDSQAQDDLPMDPDKVPSP*LGGFQH
Trigger: GTGTTGGAAGCCACCTAGTCATGGTGAAGGAACCTT...ATCTGGGTCCATGGGAAGGTCATCCTGTGCTTGTGAATCTTCATGTAAATATAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076272.5
ENSMUST00000121265.7
CDS-3UTR TCA 90 bp TATTTACATGAAGATTCACAAGCACAGGATGACCTTCCCATGGACCCAGATGTAGGGTGGAGTTGGACATaGTGGTTGATATCCTTGCTT +
Preference number: 4 (lower is better)
Translates to: YLHEDSQAQDDLPMDPDVGWSWT*WLISLL
Trigger: AAGCAAGGATATCAACCATCATGTCCAACTCCACCC...TACATCTGGGTCCATGGGAAGGTCATCCTGTGCTTGTGAATCTTCATGTAAATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076272.5
ENSMUST00000121265.7
CDS-3UTR GCA 90 bp TATTTACATGAAGATTCACAAGCACAGGATGACCTTCCCATGGACCCAGATGTAATTGAAGAGTGCTGCTaGATCAGCTCCACCATGATG +
Preference number: 4 (lower is better)
Translates to: YLHEDSQAQDDLPMDPDVIEECC*ISSTMM
Trigger: CATCATGGTGGAGCTGATGCAGCAGCACTCTTCAAT...TACATCTGGGTCCATGGGAAGGTCATCCTGTGCTTGTGAATCTTCATGTAAATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076272.5
ENSMUST00000121265.7
CDS-3UTR GCA 90 bp CAAATATATTTACATGAAGATTCACAAGCACAGGATGACCTTCCCATGGACCCATCTGCTTGGATGGCATaGGCTCAAAGCTCTGATGCA +
Preference number: 4 (lower is better)
Translates to: QIYLHEDSQAQDDLPMDPSAWMA*AQSSDA
Trigger: TGCATCAGAGCTTTGAGCGCATGCCATCCAAGCAGA...TGGGTCCATGGGAAGGTCATCCTGTGCTTGTGAATCTTCATGTAAATATATTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076272.5
ENSMUST00000121265.7
CDS-3UTR GCA 90 bp TATTTACATGAAGATTCACAAGCACAGGATGACCTTCCCATGGACCCAGATGTAATAAGCCCCAGTATCTaGACCAAAATCCCTCTCCAG +
Preference number: 4 (lower is better)
Translates to: YLHEDSQAQDDLPMDPDVISPSI*TKIPLQ
Trigger: CTGGAGAGGGATTTTGGTGCAGATACTGGGGCTTAT...TACATCTGGGTCCATGGGAAGGTCATCCTGTGCTTGTGAATCTTCATGTAAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000076272.5
ENSMUST00000121265.7
CDS-3UTR GCA 90 bp ATATATTTACATGAAGATTCACAAGCACAGGATGACCTTCCCATGGACCCAGATTCGTGGCAATGGCAGTaGTCAGCCTACGTTTGTTTC +
Preference number: 4 (lower is better)
Translates to: IYLHEDSQAQDDLPMDPDSWQWQ*SAYVCF
Trigger: GAAACAAACGTAGGCTGAGCACTGCCATTGCCACGA...ATCTGGGTCCATGGGAAGGTCATCCTGTGCTTGTGAATCTTCATGTAAATATAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076272.5
ENSMUST00000121265.7
CDS-3UTR CCA 90 bp TATTTACATGAAGATTCACAAGCACAGGATGACCTTCCCATGGACCCAGATGTATTTCCTCTGGGGGCTTaGCTGAGGTTTATTGAAGAC +
Preference number: 4 (lower is better)
Translates to: YLHEDSQAQDDLPMDPDVFPLGA*LRFIED
Trigger: GTCTTCAATAAACCTCAGCCAAGCCCCCAGAGGAAA...TACATCTGGGTCCATGGGAAGGTCATCCTGTGCTTGTGAATCTTCATGTAAATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000076272.5
ENSMUST00000121265.7
CDS-3UTR CCA 90 bp CAAATATATTTACATGAAGATTCACAAGCACAGGATGACCTTCCCATGGACCCAGCCAGTACACAAGGATaGAGACCCCACTCAGAAACT +
Preference number: 4 (lower is better)
Translates to: QIYLHEDSQAQDDLPMDPASTQG*RPHSET
Trigger: AGTTTCTGAGTGGGGTCTCCATCCTTGTGTACTGGC...TGGGTCCATGGGAAGGTCATCCTGTGCTTGTGAATCTTCATGTAAATATATTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076272.5
ENSMUST00000121265.7
CDS-3UTR TCA 90 bp CAAATATATTTACATGAAGATTCACAAGCACAGGATGACCTTCCCATGGACCCAACAGACAGAGGAAGGTaGAGAAATAGGCAACCCAGA +
Preference number: 4 (lower is better)
Translates to: QIYLHEDSQAQDDLPMDPTDRGR*RNRQPR
Trigger: TCTGGGTTGCCTATTTCTTCACCTTCCTCTGTCTGT...TGGGTCCATGGGAAGGTCATCCTGTGCTTGTGAATCTTCATGTAAATATATTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076272.5
ENSMUST00000121265.7
CDS-3UTR TCA 90 bp CAAATATATTTACATGAAGATTCACAAGCACAGGATGACCTTCCCATGGACCCACCTTGTGTAGGTGTTTaGTCTGTATGCCTGCTGTCA +
Preference number: 4 (lower is better)
Translates to: QIYLHEDSQAQDDLPMDPPCVGV*SVCLLS
Trigger: TGACAGCAGGCATACAGATCAAACACCTACACAAGG...TGGGTCCATGGGAAGGTCATCCTGTGCTTGTGAATCTTCATGTAAATATATTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076272.5
ENSMUST00000121265.7
CDS-3UTR TCA 90 bp ATATATTTACATGAAGATTCACAAGCACAGGATGACCTTCCCATGGACCCAGATCCTTGTGTAGGTGTTTaGTCTGTATGCCTGCTGTCA +
Preference number: 4 (lower is better)
Translates to: IYLHEDSQAQDDLPMDPDPCVGV*SVCLLS
Trigger: TGACAGCAGGCATACAGATCAAACACCTACACAAGG...ATCTGGGTCCATGGGAAGGTCATCCTGTGCTTGTGAATCTTCATGTAAATATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076272.5
ENSMUST00000121265.7
CDS-3UTR TCA 90 bp ATATATTTACATGAAGATTCACAAGCACAGGATGACCTTCCCATGGACCCAGATTCAAAGACAAGTCTTTaGTGGCGACCTTGGTGGTGT +
Preference number: 4 (lower is better)
Translates to: IYLHEDSQAQDDLPMDPDSKTSL*WRPWWC
Trigger: ACACCACCAAGGTCGCCATCAAAGACTTGTCTTTGA...ATCTGGGTCCATGGGAAGGTCATCCTGTGCTTGTGAATCTTCATGTAAATATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076272.5
ENSMUST00000121265.7
CDS-3UTR TCA 90 bp CAAATATATTTACATGAAGATTCACAAGCACAGGATGACCTTCCCATGGACCCATCAAAGACAAGTCTTTaGTGGCGACCTTGGTGGTGT +
Preference number: 4 (lower is better)
Translates to: QIYLHEDSQAQDDLPMDPSKTSL*WRPWWC
Trigger: ACACCACCAAGGTCGCCATCAAAGACTTGTCTTTGA...TGGGTCCATGGGAAGGTCATCCTGTGCTTGTGAATCTTCATGTAAATATATTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076272.5
ENSMUST00000121265.7
CDS-3UTR TCA 90 bp CAAATATATTTACATGAAGATTCACAAGCACAGGATGACCTTCCCATGGACCCAAACAACAGGTTCTGCTaGGGACATAAGCCCAAGGAA +
Preference number: 4 (lower is better)
Translates to: QIYLHEDSQAQDDLPMDPNNRFC*GHKPKE
Trigger: TTCCTTGGGCTTATGTCCTCAGCAGAACCTGTTGTT...TGGGTCCATGGGAAGGTCATCCTGTGCTTGTGAATCTTCATGTAAATATATTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076272.5
ENSMUST00000121265.7
CDS-3UTR TCA 90 bp ATATATTTACATGAAGATTCACAAGCACAGGATGACCTTCCCATGGACCCAGATAACAACAGGTTCTGCTaGGGACATAAGCCCAAGGAA +
Preference number: 4 (lower is better)
Translates to: IYLHEDSQAQDDLPMDPDNNRFC*GHKPKE
Trigger: TTCCTTGGGCTTATGTCCTCAGCAGAACCTGTTGTT...ATCTGGGTCCATGGGAAGGTCATCCTGTGCTTGTGAATCTTCATGTAAATATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076272.5
ENSMUST00000121265.7
CDS-3UTR TCA 90 bp CAAATATATTTACATGAAGATTCACAAGCACAGGATGACCTTCCCATGGACCCAGGGTGGAGTTGGACATaGTGGTTGATATCCTTGCTT +
Preference number: 4 (lower is better)
Translates to: QIYLHEDSQAQDDLPMDPGWSWT*WLISLL
Trigger: AAGCAAGGATATCAACCATCATGTCCAACTCCACCC...TGGGTCCATGGGAAGGTCATCCTGTGCTTGTGAATCTTCATGTAAATATATTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076272.5
ENSMUST00000121265.7
CDS-3UTR TCA 90 bp TATTTACATGAAGATTCACAAGCACAGGATGACCTTCCCATGGACCCAGATGTAATAAGACTGTTGGCATaGGACTCCAGGTCCAAAGAA +
Preference number: 4 (lower is better)
Translates to: YLHEDSQAQDDLPMDPDVIRLLA*DSRSKE
Trigger: TTCTTTGGACCTGGAGTCTCATGCCAACAGTCTTAT...TACATCTGGGTCCATGGGAAGGTCATCCTGTGCTTGTGAATCTTCATGTAAATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076272.5
ENSMUST00000121265.7
CDS-3UTR GCA 90 bp TATTTACATGAAGATTCACAAGCACAGGATGACCTTCCCATGGACCCAGATGTAAGGATCACTGCTGTTTaGAAAGTTGTGGCCAAACAC +
Preference number: 4 (lower is better)
Translates to: YLHEDSQAQDDLPMDPDVRITAV*KVVAKH
Trigger: GTGTTTGGCCACAACTTTGCAAACAGCAGTGATCCT...TACATCTGGGTCCATGGGAAGGTCATCCTGTGCTTGTGAATCTTCATGTAAATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076272.5
ENSMUST00000121265.7
CDS-3UTR GCA 90 bp TATTTACATGAAGATTCACAAGCACAGGATGACCTTCCCATGGACCCAGATGTACGTTCTTTTGCTGGATaGATAGCATCTTCTTCCGGT +
Preference number: 4 (lower is better)
Translates to: YLHEDSQAQDDLPMDPDVRSFAG*IASSSG
Trigger: ACCGGAAGAAGATGCTATGCATCCAGCAAAAGAACG...TACATCTGGGTCCATGGGAAGGTCATCCTGTGCTTGTGAATCTTCATGTAAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076272.5
ENSMUST00000121265.7
CDS-3UTR CCA 90 bp TATTTACATGAAGATTCACAAGCACAGGATGACCTTCCCATGGACCCAGATGTAGTTGGGTCATTGTATTaGAAGATTGGCGCAGGTTCA +
Preference number: 4 (lower is better)
Translates to: YLHEDSQAQDDLPMDPDVVGSLY*KIGAGS
Trigger: TGAACCTGCGCCAATCTTCCAATACAATGACCCAAC...TACATCTGGGTCCATGGGAAGGTCATCCTGTGCTTGTGAATCTTCATGTAAATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076272.5
ENSMUST00000121265.7
CDS-3UTR CCA 90 bp CAAATATATTTACATGAAGATTCACAAGCACAGGATGACCTTCCCATGGACCCATTTCCTCTGGGGGCTTaGCTGAGGTTTATTGAAGAC +
Preference number: 4 (lower is better)
Translates to: QIYLHEDSQAQDDLPMDPFPLGA*LRFIED
Trigger: GTCTTCAATAAACCTCAGCCAAGCCCCCAGAGGAAA...TGGGTCCATGGGAAGGTCATCCTGTGCTTGTGAATCTTCATGTAAATATATTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000076272.5
ENSMUST00000121265.7
CDS-3UTR CCA 90 bp ATATATTTACATGAAGATTCACAAGCACAGGATGACCTTCCCATGGACCCAGATTTGAGCAGGAAGGTTTaGGTGGAGTTGGACATGATG +
Preference number: 4 (lower is better)
Translates to: IYLHEDSQAQDDLPMDPDLSRKV*VELDMM
Trigger: CATCATGTCCAACTCCACCCAAACCTTCCTGCTCAA...ATCTGGGTCCATGGGAAGGTCATCCTGTGCTTGTGAATCTTCATGTAAATATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076272.5
ENSMUST00000121265.7
CDS-3UTR CCA 90 bp CAAATATATTTACATGAAGATTCACAAGCACAGGATGACCTTCCCATGGACCCATTGAGCAGGAAGGTTTaGGTGGAGTTGGACATGATG +
Preference number: 4 (lower is better)
Translates to: QIYLHEDSQAQDDLPMDPLSRKV*VELDMM
Trigger: CATCATGTCCAACTCCACCCAAACCTTCCTGCTCAA...TGGGTCCATGGGAAGGTCATCCTGTGCTTGTGAATCTTCATGTAAATATATTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076272.5
ENSMUST00000121265.7
CDS-3UTR CCA 90 bp TATTTACATGAAGATTCACAAGCACAGGATGACCTTCCCATGGACCCAGATGTAAAGCACGCCCTCTCTTaGATAGCAAGGGAGATATTT +
Preference number: 4 (lower is better)
Translates to: YLHEDSQAQDDLPMDPDVKHALS*IAREIF
Trigger: AAATATCTCCCTTGCTATCCAAGAGAGGGCGTGCTT...TACATCTGGGTCCATGGGAAGGTCATCCTGTGCTTGTGAATCTTCATGTAAATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076272.5
ENSMUST00000121265.7
CDS-3UTR TCA 90 bp TATTTACATGAAGATTCACAAGCACAGGATGACCTTCCCATGGACCCAGATGTATATTCTCTACCACCATaGTGTTGGAAGGCACATAAG +
Preference number: 4 (lower is better)
Translates to: YLHEDSQAQDDLPMDPDVYSLPP*CWKAHK
Trigger: CTTATGTGCCTTCCAACATCATGGTGGTAGAGAATA...TACATCTGGGTCCATGGGAAGGTCATCCTGTGCTTGTGAATCTTCATGTAAATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076272.5
ENSMUST00000121265.7
CDS-3UTR TCA 90 bp TATTTACATGAAGATTCACAAGCACAGGATGACCTTCCCATGGACCCAGATGTACAGCTGGGAAGTAGGTaGGGAAAAATAAGAAACTTC +
Preference number: 4 (lower is better)
Translates to: YLHEDSQAQDDLPMDPDVQLGSR*GKIRNF
Trigger: GAAGTTTCTTATTTTTCCTCACCTACTTCCCAGCTG...TACATCTGGGTCCATGGGAAGGTCATCCTGTGCTTGTGAATCTTCATGTAAATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000076272.5
ENSMUST00000121265.7
CDS-3UTR TCA 90 bp ATATATTTACATGAAGATTCACAAGCACAGGATGACCTTCCCATGGACCCAGATTGCCCAGCTGAATTTTaGAGGCTACAATCTTCCCAT +
Preference number: 4 (lower is better)
Translates to: IYLHEDSQAQDDLPMDPDCPAEF*RLQSSH
Trigger: ATGGGAAGATTGTAGCCTTCAAAATTCAGCTGGGCA...ATCTGGGTCCATGGGAAGGTCATCCTGTGCTTGTGAATCTTCATGTAAATATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076272.5
ENSMUST00000121265.7
CDS-3UTR TCA 90 bp CAAATATATTTACATGAAGATTCACAAGCACAGGATGACCTTCCCATGGACCCATGCCCAGCTGAATTTTaGAGGCTACAATCTTCCCAT +
Preference number: 4 (lower is better)
Translates to: QIYLHEDSQAQDDLPMDPCPAEF*RLQSSH
Trigger: ATGGGAAGATTGTAGCCTTCAAAATTCAGCTGGGCA...TGGGTCCATGGGAAGGTCATCCTGTGCTTGTGAATCTTCATGTAAATATATTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076272.5
ENSMUST00000121265.7
CDS-3UTR TCA 90 bp TATTTACATGAAGATTCACAAGCACAGGATGACCTTCCCATGGACCCAGATGTATTTTACCTGCTCCATTaGATCCAAGTAACCCAAAGC +
Preference number: 4 (lower is better)
Translates to: YLHEDSQAQDDLPMDPDVFYLLH*IQVTQS
Trigger: GCTTTGGGTTACTTGGATTCAATGGAGCAGGTAAAA...TACATCTGGGTCCATGGGAAGGTCATCCTGTGCTTGTGAATCTTCATGTAAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076272.5
ENSMUST00000121265.7
CDS-3UTR TCA 90 bp ATATATTTACATGAAGATTCACAAGCACAGGATGACCTTCCCATGGACCCAGATCTGAATCTGATGCTCTaGGATTCCCCATATTCTTGC +
Preference number: 4 (lower is better)
Translates to: IYLHEDSQAQDDLPMDPDLNLML*DSPYSC
Trigger: GCAAGAATATGGGGAATCTCAGAGCATCAGATTCAG...ATCTGGGTCCATGGGAAGGTCATCCTGTGCTTGTGAATCTTCATGTAAATATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076272.5
ENSMUST00000121265.7
CDS-3UTR TCA 90 bp CAAATATATTTACATGAAGATTCACAAGCACAGGATGACCTTCCCATGGACCCAATGTTTCCCCAGACTTaGCCTTGGCCTTCAGAATAT +
Preference number: 4 (lower is better)
Translates to: QIYLHEDSQAQDDLPMDPMFPQT*PWPSEY
Trigger: ATATTCTGAAGGCCAAGGTCAAGTCTGGGGAAACAT...TGGGTCCATGGGAAGGTCATCCTGTGCTTGTGAATCTTCATGTAAATATATTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076272.5
ENSMUST00000121265.7
CDS-3UTR TCA 90 bp ATATATTTACATGAAGATTCACAAGCACAGGATGACCTTCCCATGGACCCAGATATGTTTCCCCAGACTTaGCCTTGGCCTTCAGAATAT +
Preference number: 4 (lower is better)
Translates to: IYLHEDSQAQDDLPMDPDMFPQT*PWPSEY
Trigger: ATATTCTGAAGGCCAAGGTCAAGTCTGGGGAAACAT...ATCTGGGTCCATGGGAAGGTCATCCTGTGCTTGTGAATCTTCATGTAAATATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076272.5
ENSMUST00000121265.7
CDS-3UTR GCA 90 bp TATTTACATGAAGATTCACAAGCACAGGATGACCTTCCCATGGACCCAGATGTACTCAGAAACTGCATGTaGTTTGTCTTGTTGTGTCTC +
Preference number: 4 (lower is better)
Translates to: YLHEDSQAQDDLPMDPDVLRNCM*FVLLCL
Trigger: GAGACACAACAAGACAAAGCACATGCAGTTTCTGAG...TACATCTGGGTCCATGGGAAGGTCATCCTGTGCTTGTGAATCTTCATGTAAATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076272.5
ENSMUST00000121265.7
CDS-3UTR GCA 90 bp ATATATTTACATGAAGATTCACAAGCACAGGATGACCTTCCCATGGACCCAGATACCCCACTCAGAAACTaGATGTGCTTTGTCTTGTTG +
Preference number: 4 (lower is better)
Translates to: IYLHEDSQAQDDLPMDPDTPLRN*MCFVLL
Trigger: CAACAAGACAAAGCACATGCAGTTTCTGAGTGGGGT...ATCTGGGTCCATGGGAAGGTCATCCTGTGCTTGTGAATCTTCATGTAAATATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076272.5
ENSMUST00000121265.7
CDS-3UTR GCA 90 bp ATATATTTACATGAAGATTCACAAGCACAGGATGACCTTCCCATGGACCCAGATCGTTCTTTTGCTGGATaGATAGCATCTTCTTCCGGT +
Preference number: 4 (lower is better)
Translates to: IYLHEDSQAQDDLPMDPDRSFAG*IASSSG
Trigger: ACCGGAAGAAGATGCTATGCATCCAGCAAAAGAACG...ATCTGGGTCCATGGGAAGGTCATCCTGTGCTTGTGAATCTTCATGTAAATATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076272.5
ENSMUST00000121265.7
CDS-3UTR GCA 90 bp TATTTACATGAAGATTCACAAGCACAGGATGACCTTCCCATGGACCCAGATGTATTGAGAGCGTTCTTTTaGTGGATGCATAGCATCTTC +
Preference number: 4 (lower is better)
Translates to: YLHEDSQAQDDLPMDPDVLRAFF*WMHSIF
Trigger: GAAGATGCTATGCATCCAGCAAAAGAACGCTCTCAA...TACATCTGGGTCCATGGGAAGGTCATCCTGTGCTTGTGAATCTTCATGTAAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076272.5
ENSMUST00000121265.7
CDS-3UTR GCA 90 bp TATTTACATGAAGATTCACAAGCACAGGATGACCTTCCCATGGACCCAGATGTACCGGCTTGTATTTCTTaGAGGCACCAAAGTAAATGT +
Preference number: 4 (lower is better)
Translates to: YLHEDSQAQDDLPMDPDVPACIS*RHQSKC
Trigger: ACATTTACTTTGGTGCCTGCAAGAAATACAAGCCGG...TACATCTGGGTCCATGGGAAGGTCATCCTGTGCTTGTGAATCTTCATGTAAATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076272.5
ENSMUST00000121265.7
CDS-3UTR CCA 90 bp TATTTACATGAAGATTCACAAGCACAGGATGACCTTCCCATGGACCCAGATGTAATGCATTGCAACAGCTaGGAAGTAGGTGAGGAAAAA +
Preference number: 4 (lower is better)
Translates to: YLHEDSQAQDDLPMDPDVMHCNS*EVGEEK
Trigger: TTTTTCCTCACCTACTTCCCAGCTGTTGCAATGCAT...TACATCTGGGTCCATGGGAAGGTCATCCTGTGCTTGTGAATCTTCATGTAAATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076272.5
ENSMUST00000121265.7
CDS-3UTR CCA 90 bp TATTTACATGAAGATTCACAAGCACAGGATGACCTTCCCATGGACCCAGATGTACACACCGTACTCTCCTaGAAAGACAGCTTCTATATA +
Preference number: 4 (lower is better)
Translates to: YLHEDSQAQDDLPMDPDVHTVLS*KDSFYI
Trigger: TATATAGAAGCTGTCTTTCCAGGAGAGTACGGTGTG...TACATCTGGGTCCATGGGAAGGTCATCCTGTGCTTGTGAATCTTCATGTAAATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076272.5
ENSMUST00000121265.7
CDS-3UTR CCA 90 bp CAAATATATTTACATGAAGATTCACAAGCACAGGATGACCTTCCCATGGACCCAAAGCACGCCCTCTCTTaGATAGCAAGGGAGATATTT +
Preference number: 4 (lower is better)
Translates to: QIYLHEDSQAQDDLPMDPKHALS*IAREIF
Trigger: AAATATCTCCCTTGCTATCCAAGAGAGGGCGTGCTT...TGGGTCCATGGGAAGGTCATCCTGTGCTTGTGAATCTTCATGTAAATATATTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076272.5
ENSMUST00000121265.7
CDS-3UTR CCA 90 bp TATTTACATGAAGATTCACAAGCACAGGATGACCTTCCCATGGACCCAGATGTACATTCTTCCATGCTGTaGGATGTTATAATGATGGCC +
Preference number: 4 (lower is better)
Translates to: YLHEDSQAQDDLPMDPDVHSSML*DVIMMA
Trigger: GGCCATCATTATAACATCCCACAGCATGGAAGAATG...TACATCTGGGTCCATGGGAAGGTCATCCTGTGCTTGTGAATCTTCATGTAAATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076272.5
ENSMUST00000121265.7
CDS-3UTR TCA 90 bp CAAATATATTTACATGAAGATTCACAAGCACAGGATGACCTTCCCATGGACCCAGCGCAGGTTCAATCTTaGCAAATAAAACCATGCACA +
Preference number: 4 (lower is better)
Translates to: QIYLHEDSQAQDDLPMDPAQVQS*QIKPCT
Trigger: TGTGCATGGTTTTATTTGTCAAGATTGAACCTGCGC...TGGGTCCATGGGAAGGTCATCCTGTGCTTGTGAATCTTCATGTAAATATATTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076272.5
ENSMUST00000121265.7
CDS-3UTR TCA 90 bp CAAATATATTTACATGAAGATTCACAAGCACAGGATGACCTTCCCATGGACCCACAGCTGGGAAGTAGGTaGGGAAAAATAAGAAACTTC +
Preference number: 4 (lower is better)
Translates to: QIYLHEDSQAQDDLPMDPQLGSR*GKIRNF
Trigger: GAAGTTTCTTATTTTTCCTCACCTACTTCCCAGCTG...TGGGTCCATGGGAAGGTCATCCTGTGCTTGTGAATCTTCATGTAAATATATTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000076272.5
ENSMUST00000121265.7
CDS-3UTR TCA 90 bp TATTTACATGAAGATTCACAAGCACAGGATGACCTTCCCATGGACCCAGATGTAATTTCTAGTTTTTGTTaGGGTGGTTCTCCAAACCAG +
Preference number: 4 (lower is better)
Translates to: YLHEDSQAQDDLPMDPDVISSFC*GGSPNQ
Trigger: CTGGTTTGGAGAACCACCTCAACAAAAACTAGAAAT...TACATCTGGGTCCATGGGAAGGTCATCCTGTGCTTGTGAATCTTCATGTAAATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000076272.5
ENSMUST00000121265.7
CDS-3UTR TCA 90 bp TATTTACATGAAGATTCACAAGCACAGGATGACCTTCCCATGGACCCAGATGTACATCAGGTTAAAAGCTaGCAGCATGTTGTTAGTTTC +
Preference number: 4 (lower is better)
Translates to: YLHEDSQAQDDLPMDPDVHQVKS*QHVVSF
Trigger: GAAACTAACAACATGCTGTCAGCTTTTAACCTGATG...TACATCTGGGTCCATGGGAAGGTCATCCTGTGCTTGTGAATCTTCATGTAAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076272.5
ENSMUST00000121265.7
CDS-3UTR TCA 90 bp CAAATATATTTACATGAAGATTCACAAGCACAGGATGACCTTCCCATGGACCCATTAAACACAATGTTCTaGTCTTCACTCTGGGTGGGA +
Preference number: 4 (lower is better)
Translates to: QIYLHEDSQAQDDLPMDPLNTMF*SSLWVG
Trigger: TCCCACCCAGAGTGAAGATCAGAACATTGTGTTTAA...TGGGTCCATGGGAAGGTCATCCTGTGCTTGTGAATCTTCATGTAAATATATTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076272.5
ENSMUST00000121265.7
CDS-3UTR TCA 90 bp ATATATTTACATGAAGATTCACAAGCACAGGATGACCTTCCCATGGACCCAGATTTTTACCTGCTCCATTaGATCCAAGTAACCCAAAGC +
Preference number: 4 (lower is better)
Translates to: IYLHEDSQAQDDLPMDPDFYLLH*IQVTQS
Trigger: GCTTTGGGTTACTTGGATTCAATGGAGCAGGTAAAA...ATCTGGGTCCATGGGAAGGTCATCCTGTGCTTGTGAATCTTCATGTAAATATAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000076272.5
ENSMUST00000121265.7
CDS-3UTR GCA 90 bp TATTTACATGAAGATTCACAAGCACAGGATGACCTTCCCATGGACCCAGATGTATTTGATCTGTATGCCTaGTGTCAAATCAGTTGGTTC +
Preference number: 4 (lower is better)
Translates to: YLHEDSQAQDDLPMDPDVFDLYA*CQISWF
Trigger: GAACCAACTGATTTGACAGCAGGCATACAGATCAAA...TACATCTGGGTCCATGGGAAGGTCATCCTGTGCTTGTGAATCTTCATGTAAATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076272.5
ENSMUST00000121265.7
CDS-3UTR GCA 90 bp ATATATTTACATGAAGATTCACAAGCACAGGATGACCTTCCCATGGACCCAGATCTCAGAAACTGCATGTaGTTTGTCTTGTTGTGTCTC +
Preference number: 4 (lower is better)
Translates to: IYLHEDSQAQDDLPMDPDLRNCM*FVLLCL
Trigger: GAGACACAACAAGACAAAGCACATGCAGTTTCTGAG...ATCTGGGTCCATGGGAAGGTCATCCTGTGCTTGTGAATCTTCATGTAAATATAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076272.5
ENSMUST00000121265.7
CDS-3UTR GCA 90 bp CAAATATATTTACATGAAGATTCACAAGCACAGGATGACCTTCCCATGGACCCATTGAGAGCGTTCTTTTaGTGGATGCATAGCATCTTC +
Preference number: 4 (lower is better)
Translates to: QIYLHEDSQAQDDLPMDPLRAFF*WMHSIF
Trigger: GAAGATGCTATGCATCCAGCAAAAGAACGCTCTCAA...TGGGTCCATGGGAAGGTCATCCTGTGCTTGTGAATCTTCATGTAAATATATTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076272.5
ENSMUST00000121265.7
CDS-3UTR GCA 90 bp ATATATTTACATGAAGATTCACAAGCACAGGATGACCTTCCCATGGACCCAGATCCGGCTTGTATTTCTTaGAGGCACCAAAGTAAATGT +
Preference number: 4 (lower is better)
Translates to: IYLHEDSQAQDDLPMDPDPACIS*RHQSKC
Trigger: ACATTTACTTTGGTGCCTGCAAGAAATACAAGCCGG...ATCTGGGTCCATGGGAAGGTCATCCTGTGCTTGTGAATCTTCATGTAAATATAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076272.5
ENSMUST00000121265.7
CDS-3UTR CCA 90 bp ATATATTTACATGAAGATTCACAAGCACAGGATGACCTTCCCATGGACCCAGATACAGTGCTGATAGGTTaGTCAGGAAAATACAGAGCT +
Preference number: 4 (lower is better)
Translates to: IYLHEDSQAQDDLPMDPDTVLIG*SGKYRA
Trigger: AGCTCTGTATTTTCCTGACCAACCTATCAGCACTGT...ATCTGGGTCCATGGGAAGGTCATCCTGTGCTTGTGAATCTTCATGTAAATATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076272.5
ENSMUST00000121265.7
CDS-3UTR CCA 90 bp TATTTACATGAAGATTCACAAGCACAGGATGACCTTCCCATGGACCCAGATGTAGTATTTTACCTTCTTTaGCAGAGGATCACTGCTGTT +
Preference number: 4 (lower is better)
Translates to: YLHEDSQAQDDLPMDPDVVFYLL*QRITAV
Trigger: AACAGCAGTGATCCTCTGCCAAAGAAGGTAAAATAC...TACATCTGGGTCCATGGGAAGGTCATCCTGTGCTTGTGAATCTTCATGTAAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076272.5
ENSMUST00000121265.7
CDS-3UTR CCA 90 bp TATTTACATGAAGATTCACAAGCACAGGATGACCTTCCCATGGACCCAGATGTAATTGTATTGGAAGATTaGCGCAGGTTCAATCTTGAC +
Preference number: 4 (lower is better)
Translates to: YLHEDSQAQDDLPMDPDVIVLED*RRFNLD
Trigger: GTCAAGATTGAACCTGCGCCAATCTTCCAATACAAT...TACATCTGGGTCCATGGGAAGGTCATCCTGTGCTTGTGAATCTTCATGTAAATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076272.5
ENSMUST00000121265.7
CDS-3UTR CCA 90 bp CAAATATATTTACATGAAGATTCACAAGCACAGGATGACCTTCCCATGGACCCACACACCGTACTCTCCTaGAAAGACAGCTTCTATATA +
Preference number: 4 (lower is better)
Translates to: QIYLHEDSQAQDDLPMDPHTVLS*KDSFYI
Trigger: TATATAGAAGCTGTCTTTCCAGGAGAGTACGGTGTG...TGGGTCCATGGGAAGGTCATCCTGTGCTTGTGAATCTTCATGTAAATATATTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076272.5
ENSMUST00000121265.7
CDS-3UTR CCA 90 bp ATATATTTACATGAAGATTCACAAGCACAGGATGACCTTCCCATGGACCCAGATACTTCCTTGAGTTGGTaGTTGCCAGGTTTTAGCATA +
Preference number: 4 (lower is better)
Translates to: IYLHEDSQAQDDLPMDPDTSLSW*LPGFSI
Trigger: TATGCTAAAACCTGGCAACCACCAACTCAAGGAAGT...ATCTGGGTCCATGGGAAGGTCATCCTGTGCTTGTGAATCTTCATGTAAATATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076272.5
ENSMUST00000121265.7
CDS-3UTR CCA 90 bp CAAATATATTTACATGAAGATTCACAAGCACAGGATGACCTTCCCATGGACCCAACTTCCTTGAGTTGGTaGTTGCCAGGTTTTAGCATA +
Preference number: 4 (lower is better)
Translates to: QIYLHEDSQAQDDLPMDPTSLSW*LPGFSI
Trigger: TATGCTAAAACCTGGCAACCACCAACTCAAGGAAGT...TGGGTCCATGGGAAGGTCATCCTGTGCTTGTGAATCTTCATGTAAATATATTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076272.5
ENSMUST00000121265.7
CDS-3UTR CCA 90 bp CAAATATATTTACATGAAGATTCACAAGCACAGGATGACCTTCCCATGGACCCACATTCTTCCATGCTGTaGGATGTTATAATGATGGCC +
Preference number: 4 (lower is better)
Translates to: QIYLHEDSQAQDDLPMDPHSSML*DVIMMA
Trigger: GGCCATCATTATAACATCCCACAGCATGGAAGAATG...TGGGTCCATGGGAAGGTCATCCTGTGCTTGTGAATCTTCATGTAAATATATTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076272.5
ENSMUST00000121265.7
CDS-3UTR TCA 90 bp CAAATATATTTACATGAAGATTCACAAGCACAGGATGACCTTCCCATGGACCCAATTTCTAGTTTTTGTTaGGGTGGTTCTCCAAACCAG +
Preference number: 4 (lower is better)
Translates to: QIYLHEDSQAQDDLPMDPISSFC*GGSPNQ
Trigger: CTGGTTTGGAGAACCACCTCAACAAAAACTAGAAAT...TGGGTCCATGGGAAGGTCATCCTGTGCTTGTGAATCTTCATGTAAATATATTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000076272.5
ENSMUST00000121265.7
CDS-3UTR TCA 90 bp CAAATATATTTACATGAAGATTCACAAGCACAGGATGACCTTCCCATGGACCCACATCAGGTTAAAAGCTaGCAGCATGTTGTTAGTTTC +
Preference number: 4 (lower is better)
Translates to: QIYLHEDSQAQDDLPMDPHQVKS*QHVVSF
Trigger: GAAACTAACAACATGCTGTCAGCTTTTAACCTGATG...TGGGTCCATGGGAAGGTCATCCTGTGCTTGTGAATCTTCATGTAAATATATTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076272.5
ENSMUST00000121265.7
CDS-3UTR TCA 90 bp TATTTACATGAAGATTCACAAGCACAGGATGACCTTCCCATGGACCCAGATGTAGTTGGACATGATGGTTaGTATCCTTGCTTCTATTAT +
Preference number: 4 (lower is better)
Translates to: YLHEDSQAQDDLPMDPDVVGHDG*YPCFYY
Trigger: ATAATAGAAGCAAGGATATCAACCATCATGTCCAAC...TACATCTGGGTCCATGGGAAGGTCATCCTGTGCTTGTGAATCTTCATGTAAATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076272.5
ENSMUST00000121265.7
CDS-3UTR GCA 90 bp TATTTACATGAAGATTCACAAGCACAGGATGACCTTCCCATGGACCCAGATGTAGTCCCCTTGATAATATaGCCCAGAATTTATGTTCTT +
Preference number: 4 (lower is better)
Translates to: YLHEDSQAQDDLPMDPDVVPLII*PRIYVL
Trigger: AAGAACATAAATTCTGGGGCATATTATCAAGGGGAC...TACATCTGGGTCCATGGGAAGGTCATCCTGTGCTTGTGAATCTTCATGTAAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076272.5
ENSMUST00000121265.7
CDS-3UTR CCA 90 bp TATTTACATGAAGATTCACAAGCACAGGATGACCTTCCCATGGACCCAGATGTATTTATACTAAGAAGGTaGCGTGTTGTCAAAAGCACA +
Preference number: 4 (lower is better)
Translates to: YLHEDSQAQDDLPMDPDVFILRR*RVVKST
Trigger: TGTGCTTTTGACAACACGCCACCTTCTTAGTATAAA...TACATCTGGGTCCATGGGAAGGTCATCCTGTGCTTGTGAATCTTCATGTAAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076272.5
ENSMUST00000121265.7
CDS-3UTR CCA 90 bp CAAATATATTTACATGAAGATTCACAAGCACAGGATGACCTTCCCATGGACCCAGTATTTTACCTTCTTTaGCAGAGGATCACTGCTGTT +
Preference number: 4 (lower is better)
Translates to: QIYLHEDSQAQDDLPMDPVFYLL*QRITAV
Trigger: AACAGCAGTGATCCTCTGCCAAAGAAGGTAAAATAC...TGGGTCCATGGGAAGGTCATCCTGTGCTTGTGAATCTTCATGTAAATATATTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076272.5
ENSMUST00000121265.7
CDS-3UTR CCA 90 bp CAAATATATTTACATGAAGATTCACAAGCACAGGATGACCTTCCCATGGACCCAATTGTATTGGAAGATTaGCGCAGGTTCAATCTTGAC +
Preference number: 4 (lower is better)
Translates to: QIYLHEDSQAQDDLPMDPIVLED*RRFNLD
Trigger: GTCAAGATTGAACCTGCGCCAATCTTCCAATACAAT...TGGGTCCATGGGAAGGTCATCCTGTGCTTGTGAATCTTCATGTAAATATATTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076272.5
ENSMUST00000121265.7
CDS-3UTR CCA 90 bp CAAATATATTTACATGAAGATTCACAAGCACAGGATGACCTTCCCATGGACCCAGATGAAGACAAGGGTTaGGTCATTGTATTGGAAGAT +
Preference number: 4 (lower is better)
Translates to: QIYLHEDSQAQDDLPMDPDEDKG*VIVLED
Trigger: ATCTTCCAATACAATGACCCAACCCTTGTCTTCATC...TGGGTCCATGGGAAGGTCATCCTGTGCTTGTGAATCTTCATGTAAATATATTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076272.5
ENSMUST00000121265.7
CDS-3UTR CCA 90 bp TATTTACATGAAGATTCACAAGCACAGGATGACCTTCCCATGGACCCAGATGTAGTGGTGTTATTCTTTTaGAATACCTTGTGTAGGTGT +
Preference number: 4 (lower is better)
Translates to: YLHEDSQAQDDLPMDPDVVVLFF*NTLCRC
Trigger: ACACCTACACAAGGTATTCCAAAAGAATAACACCAC...TACATCTGGGTCCATGGGAAGGTCATCCTGTGCTTGTGAATCTTCATGTAAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076272.5
ENSMUST00000121265.7
CDS-3UTR TCA 90 bp CAAATATATTTACATGAAGATTCACAAGCACAGGATGACCTTCCCATGGACCCAGGGTATGGAAATCTCTaGATGAAAAGACTAATGTCA +
Preference number: 4 (lower is better)
Translates to: QIYLHEDSQAQDDLPMDPGYGNL*MKRLMS
Trigger: TGACATTAGTCTTTTCATTCAGAGATTTCCATACCC...TGGGTCCATGGGAAGGTCATCCTGTGCTTGTGAATCTTCATGTAAATATATTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076272.5
ENSMUST00000121265.7
CDS-3UTR TCA 90 bp ATATATTTACATGAAGATTCACAAGCACAGGATGACCTTCCCATGGACCCAGATATCAGAACCAGAAAGTaGCATGAAAAGAATGTTGTC +
Preference number: 4 (lower is better)
Translates to: IYLHEDSQAQDDLPMDPDIRTRK*HEKNVV
Trigger: GACAACATTCTTTTCATGTCACTTTCTGGTTCTGAT...ATCTGGGTCCATGGGAAGGTCATCCTGTGCTTGTGAATCTTCATGTAAATATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076272.5
ENSMUST00000121265.7
CDS-3UTR TCA 90 bp CAAATATATTTACATGAAGATTCACAAGCACAGGATGACCTTCCCATGGACCCAGTTGGACATGATGGTTaGTATCCTTGCTTCTATTAT +
Preference number: 4 (lower is better)
Translates to: QIYLHEDSQAQDDLPMDPVGHDG*YPCFYY
Trigger: ATAATAGAAGCAAGGATATCAACCATCATGTCCAAC...TGGGTCCATGGGAAGGTCATCCTGTGCTTGTGAATCTTCATGTAAATATATTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076272.5
ENSMUST00000121265.7
CDS-3UTR TCA 90 bp ATATATTTACATGAAGATTCACAAGCACAGGATGACCTTCCCATGGACCCAGATACAATAGCCAATTTTTaGCCTGACCTTTACGATGTT +
Preference number: 4 (lower is better)
Translates to: IYLHEDSQAQDDLPMDPDTIANF*PDLYDV
Trigger: AACATCGTAAAGGTCAGGTCAAAAATTGGCTATTGT...ATCTGGGTCCATGGGAAGGTCATCCTGTGCTTGTGAATCTTCATGTAAATATAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000076272.5
ENSMUST00000121265.7
CDS-3UTR GCA 90 bp CAAATATATTTACATGAAGATTCACAAGCACAGGATGACCTTCCCATGGACCCAGTCCCCTTGATAATATaGCCCAGAATTTATGTTCTT +
Preference number: 4 (lower is better)
Translates to: QIYLHEDSQAQDDLPMDPVPLII*PRIYVL
Trigger: AAGAACATAAATTCTGGGGCATATTATCAAGGGGAC...TGGGTCCATGGGAAGGTCATCCTGTGCTTGTGAATCTTCATGTAAATATATTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076272.5
ENSMUST00000121265.7
CDS-3UTR CCA 90 bp ATATATTTACATGAAGATTCACAAGCACAGGATGACCTTCCCATGGACCCAGATTTTATACTAAGAAGGTaGCGTGTTGTCAAAAGCACA +
Preference number: 4 (lower is better)
Translates to: IYLHEDSQAQDDLPMDPDFILRR*RVVKST
Trigger: TGTGCTTTTGACAACACGCCACCTTCTTAGTATAAA...ATCTGGGTCCATGGGAAGGTCATCCTGTGCTTGTGAATCTTCATGTAAATATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000076272.5
ENSMUST00000121265.7
CDS-3UTR CCA 90 bp CAAATATATTTACATGAAGATTCACAAGCACAGGATGACCTTCCCATGGACCCATGCTGTCAAATCAGTTaGTTCAGCTTCAAAGTACTT +
Preference number: 4 (lower is better)
Translates to: QIYLHEDSQAQDDLPMDPCCQIS*FSFKVL
Trigger: AAGTACTTTGAAGCTGAACCAACTGATTTGACAGCA...TGGGTCCATGGGAAGGTCATCCTGTGCTTGTGAATCTTCATGTAAATATATTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076272.5
ENSMUST00000121265.7
CDS-3UTR CCA 90 bp ATATATTTACATGAAGATTCACAAGCACAGGATGACCTTCCCATGGACCCAGATTGCTGTCAAATCAGTTaGTTCAGCTTCAAAGTACTT +
Preference number: 4 (lower is better)
Translates to: IYLHEDSQAQDDLPMDPDCCQIS*FSFKVL
Trigger: AAGTACTTTGAAGCTGAACCAACTGATTTGACAGCA...ATCTGGGTCCATGGGAAGGTCATCCTGTGCTTGTGAATCTTCATGTAAATATAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076272.5
ENSMUST00000121265.7
CDS-3UTR CCA 90 bp CAAATATATTTACATGAAGATTCACAAGCACAGGATGACCTTCCCATGGACCCAGTGGTGTTATTCTTTTaGAATACCTTGTGTAGGTGT +
Preference number: 4 (lower is better)
Translates to: QIYLHEDSQAQDDLPMDPVVLFF*NTLCRC
Trigger: ACACCTACACAAGGTATTCCAAAAGAATAACACCAC...TGGGTCCATGGGAAGGTCATCCTGTGCTTGTGAATCTTCATGTAAATATATTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076272.5
ENSMUST00000121265.7
CDS-3UTR CCA 90 bp TATTTACATGAAGATTCACAAGCACAGGATGACCTTCCCATGGACCCAGATGTAAGAAACTTTTCAGGCTaGTACAAAATTTCTCTTCTC +
Preference number: 4 (lower is better)
Translates to: YLHEDSQAQDDLPMDPDVRNFSG*YKISLL
Trigger: GAGAAGAGAAATTTTGTACCAGCCTGAAAAGTTTCT...TACATCTGGGTCCATGGGAAGGTCATCCTGTGCTTGTGAATCTTCATGTAAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000076272.5
ENSMUST00000121265.7
CDS-3UTR CCA 90 bp TATTTACATGAAGATTCACAAGCACAGGATGACCTTCCCATGGACCCAGATGTACTCCTTAATAAGAACTaGGCAATTCAGAAACTTTTC +
Preference number: 4 (lower is better)
Translates to: YLHEDSQAQDDLPMDPDVLLNKN*AIQKLF
Trigger: GAAAAGTTTCTGAATTGCCCAGTTCTTATTAAGGAG...TACATCTGGGTCCATGGGAAGGTCATCCTGTGCTTGTGAATCTTCATGTAAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076272.5
ENSMUST00000121265.7
CDS-3UTR GCA 90 bp ATATATTTACATGAAGATTCACAAGCACAGGATGACCTTCCCATGGACCCAGATGTACTCCTTTTATCCTaGAGTAGAAATAAAGGTGTT +
Preference number: 4 (lower is better)
Translates to: IYLHEDSQAQDDLPMDPDVLLLS*SRNKGV
Trigger: AACACCTTTATTTCTACTGCAGGATAAAAGGAGTAC...ATCTGGGTCCATGGGAAGGTCATCCTGTGCTTGTGAATCTTCATGTAAATATAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076272.5
ENSMUST00000121265.7
CDS-3UTR GCA 90 bp ATATATTTACATGAAGATTCACAAGCACAGGATGACCTTCCCATGGACCCAGATTTAAGAGACTTAAAGTaGCAGAGAGATAACAGAACA +
Preference number: 4 (lower is better)
Translates to: IYLHEDSQAQDDLPMDPDLRDLK*QRDNRT
Trigger: TGTTCTGTTATCTCTCTGGCACTTTAAGTCTCTTAA...ATCTGGGTCCATGGGAAGGTCATCCTGTGCTTGTGAATCTTCATGTAAATATAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076272.5
ENSMUST00000121265.7
CDS-3UTR CCA 90 bp CAAATATATTTACATGAAGATTCACAAGCACAGGATGACCTTCCCATGGACCCAAGAAACTTTTCAGGCTaGTACAAAATTTCTCTTCTC +
Preference number: 4 (lower is better)
Translates to: QIYLHEDSQAQDDLPMDPRNFSG*YKISLL
Trigger: GAGAAGAGAAATTTTGTACCAGCCTGAAAAGTTTCT...TGGGTCCATGGGAAGGTCATCCTGTGCTTGTGAATCTTCATGTAAATATATTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000076272.5
ENSMUST00000121265.7
CDS GCA 90 bp CAATGTTCTGATCTTCACTCTGGGTGGGAAAGCCTACTCTCCCGCTaGTTTCAACATCCCCATTCTTGTTCCCTTTGCTTCCTACCGAGG +
Preference number: 5 (lower is better)
Translates to: QCSDLHSGWESLLSR*FQHPHSCSLCFLPR
Trigger: CCTCGGTAGGAAGCAAAGGGAACAAGAATGGGGATGTTGAAAGCAGCGGGAGAGTAGGCTTTCCCACCCAGAGTGAAGATCAGAACATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076272.5
ENSMUST00000121265.7
CDS GCA 90 bp AGAGCAGAAAGCCAGTACACAAGGATGGAGACCCCACTCAGAAACTaGATGTGCTTTGTCTTGTTGTGTCTCTCAGTCACCGTCAGGATG +
Preference number: 5 (lower is better)
Translates to: RAESQYTRMETPLRN*MCFVLLCLSVTVRM
Trigger: CATCCTGACGGTGACTGAGAGACACAACAAGACAAAGCACATGCAGTTTCTGAGTGGGGTCTCCATCCTTGTGTACTGGCTTTCTGCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076272.5
ENSMUST00000121265.7
CDS TCA 90 bp AAAAGACTAATGTCATTGAAGAGTGCTGCTGCATCAGCTCCACCATaGTGTAGCATGATGGCCTTGTCTAGGGCATGTTGCACAGCCAGG +
Preference number: 5 (lower is better)
Translates to: KRLMSLKSAAASAPP*CSMMALSRACCTAR
Trigger: CCTGGCTGTGCAACATGCCCTAGACAAGGCCATCATGCTACATCATGGTGGAGCTGATGCAGCAGCACTCTTCAATGACATTAGTCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076272.5
ENSMUST00000121265.7
CDS GCA 90 bp GAAAGCCAGTACACAAGGATGGAGACCCCACTCAGAAACTGCATGTaGTTTGTCTTGTTGTGTCTCTCAGTCACCGTCAGGATGCAAAAG +
Preference number: 5 (lower is better)
Translates to: ESQYTRMETPLRNCM*FVLLCLSVTVRMQK
Trigger: CTTTTGCATCCTGACGGTGACTGAGAGACACAACAAGACAAAGCACATGCAGTTTCTGAGTGGGGTCTCCATCCTTGTGTACTGGCTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000076272.5
ENSMUST00000121265.7
CDS CCA 90 bp CATCCCAACATTAAAGTCAAAGGACCAGATCAGCTTCTGCTTGGATaGCATGCGCTCAAAGCTCTGATGCATTGCAACAGCTGGGAAGTA +
Preference number: 5 (lower is better)
Translates to: HPNIKVKGPDQLLLG*HALKALMHCNSWEV
Trigger: TACTTCCCAGCTGTTGCAATGCATCAGAGCTTTGAGCGCATGCCATCCAAGCAGAAGCTGATCTGGTCCTTTGACTTTAATGTTGGGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076272.5
ENSMUST00000121265.7
CDS TCA 90 bp GATCAAACAACAGGTTCTGCTGAGGACATAAGCCCAAGGAATTCCTaGCTTGATCCATATGCTGGGAGATGTCTTCTCCATGGACATAGG +
Preference number: 5 (lower is better)
Translates to: DQTTGSAEDISPRNS*LDPYAGRCLLHGHR
Trigger: CCTATGTCCATGGAGAAGACATCTCCCAGCATATGGATCAAGTCAGGAATTCCTTGGGCTTATGTCCTCAGCAGAACCTGTTGTTTGATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076272.5
ENSMUST00000121265.7
CDS TCA 90 bp TTTGCTTCCTACCGAGGGCGACTGGGTAGCTTCGATATCTGTTTTTaGGTCTTCCAGGTTACTGACCTTAAGGAAGACTTCTTCCATGGT +
Preference number: 5 (lower is better)
Translates to: FASYRGRLGSFDICF*VFQVTDLKEDFFHG
Trigger: ACCATGGAAGAAGTCTTCCTTAAGGTCAGTAACCTGGAAGACTCAAAAACAGATATCGAAGCTACCCAGTCGCCCTCGGTAGGAAGCAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000076272.5
ENSMUST00000121265.7
CDS CCA 90 bp TTACCTGCTCCATTGAATCCAAGTAACCCAAAGCACGCCCTCTCTTaGATAGCAAGGGAGATATTTTTCACAGCCAGAATTAGTGGAGAC +
Preference number: 5 (lower is better)
Translates to: LPAPLNPSNPKHALS*IAREIFFTARISGD
Trigger: GTCTCCACTAATTCTGGCTGTGAAAAATATCTCCCTTGCTATCCAAGAGAGGGCGTGCTTTGGGTTACTTGGATTCAATGGAGCAGGTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000076272.5
ENSMUST00000121265.7
CDS-3UTR CAA 90 bp TATTTACATGAAGATTCACAAGCACAGGATGACCTTCCCATGGACCCAGATGTACAAAGCTCTGATGCATaGCAACAGCTGGGAAGTAGG +
Preference number: 5 (lower is better)
Translates to: YLHEDSQAQDDLPMDPDVQSSDA*QQLGSR
Trigger: CCTACTTCCCAGCTGTTGCAATGCATCAGAGCTTTG...TACATCTGGGTCCATGGGAAGGTCATCCTGTGCTTGTGAATCTTCATGTAAATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076272.5
ENSMUST00000121265.7
CDS-3UTR CAA 90 bp TATTTACATGAAGATTCACAAGCACAGGATGACCTTCCCATGGACCCAGATGTATCTCCAGGGTGGCTGTaGGGACATAGGAATGAATCA +
Preference number: 5 (lower is better)
Translates to: YLHEDSQAQDDLPMDPDVSPGWL*GHRNES
Trigger: TGATTCATTCCTATGTCCCAACAGCCACCCTGGAGA...TACATCTGGGTCCATGGGAAGGTCATCCTGTGCTTGTGAATCTTCATGTAAATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076272.5
ENSMUST00000121265.7
CDS-3UTR CAA 90 bp TATTTACATGAAGATTCACAAGCACAGGATGACCTTCCCATGGACCCAGATGTATCACCTTGTACTTCCTaGAGTTGGTGGTTGCCAGGT +
Preference number: 5 (lower is better)
Translates to: YLHEDSQAQDDLPMDPDVSPCTS*SWWLPG
Trigger: ACCTGGCAACCACCAACTCAAGGAAGTACAAGGTGA...TACATCTGGGTCCATGGGAAGGTCATCCTGTGCTTGTGAATCTTCATGTAAATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076272.5
ENSMUST00000121265.7
CDS-3UTR CAA 90 bp TATTTACATGAAGATTCACAAGCACAGGATGACCTTCCCATGGACCCAGATGTAACCTTTCCCCAGCTGTaGTTCTTTCTGGGAATGCAG +
Preference number: 5 (lower is better)
Translates to: YLHEDSQAQDDLPMDPDVTFPQL*FFLGMQ
Trigger: CTGCATTCCCAGAAAGAACAACAGCTGGGGAAAGGT...TACATCTGGGTCCATGGGAAGGTCATCCTGTGCTTGTGAATCTTCATGTAAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076272.5
ENSMUST00000121265.7
CDS CCA 90 bp CTGGTGACAGAGGCTCGGAAGAAGGAAGGAACAGTGCTGATAGGTTaGTCAGGAAAATACAGAGCTTCAATCTTCTTTATACTAAGAAGG +
Preference number: 5 (lower is better)
Translates to: LVTEARKKEGTVLIG*SGKYRASIFFILRR
Trigger: CCTTCTTAGTATAAAGAAGATTGAAGCTCTGTATTTTCCTGACCAACCTATCAGCACTGTTCCTTCCTTCTTCCGAGCCTCTGTCACCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000076272.5
ENSMUST00000121265.7
ENSMUST00000207220.2
CDS-3UTR CAA 90 bp TATTTACATGAAGATTCACAAGCACAGGATGACCTTCCCATGGACCCAGATGTAGAGGATCACTGCTGTTaGCAAAGTTGTGGCCAAACA +
Preference number: 5 (lower is better)
Translates to: YLHEDSQAQDDLPMDPDVEDHCC*QSCGQT
Trigger: TGTTTGGCCACAACTTTGCAAACAGCAGTGATCCTC...TACATCTGGGTCCATGGGAAGGTCATCCTGTGCTTGTGAATCTTCATGTAAATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076272.5
ENSMUST00000121265.7
CDS-3UTR CAA 90 bp CAAATATATTTACATGAAGATTCACAAGCACAGGATGACCTTCCCATGGACCCATCTCCAGGGTGGCTGTaGGGACATAGGAATGAATCA +
Preference number: 5 (lower is better)
Translates to: QIYLHEDSQAQDDLPMDPSPGWL*GHRNES
Trigger: TGATTCATTCCTATGTCCCAACAGCCACCCTGGAGA...TGGGTCCATGGGAAGGTCATCCTGTGCTTGTGAATCTTCATGTAAATATATTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076272.5
ENSMUST00000121265.7
CDS-3UTR CAA 90 bp CAAATATATTTACATGAAGATTCACAAGCACAGGATGACCTTCCCATGGACCCATCACCTTGTACTTCCTaGAGTTGGTGGTTGCCAGGT +
Preference number: 5 (lower is better)
Translates to: QIYLHEDSQAQDDLPMDPSPCTS*SWWLPG
Trigger: ACCTGGCAACCACCAACTCAAGGAAGTACAAGGTGA...TGGGTCCATGGGAAGGTCATCCTGTGCTTGTGAATCTTCATGTAAATATATTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076272.5
ENSMUST00000121265.7
CDS-3UTR CAA 90 bp TATTTACATGAAGATTCACAAGCACAGGATGACCTTCCCATGGACCCAGATGTAATGTGCTTTGTCTTGTaGTGTCTCTCAGTCACCGTC +
Preference number: 5 (lower is better)
Translates to: YLHEDSQAQDDLPMDPDVMCFVL*CLSVTV
Trigger: GACGGTGACTGAGAGACACAACAAGACAAAGCACAT...TACATCTGGGTCCATGGGAAGGTCATCCTGTGCTTGTGAATCTTCATGTAAATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076272.5
ENSMUST00000121265.7
CDS-3UTR CAA 90 bp TATTTACATGAAGATTCACAAGCACAGGATGACCTTCCCATGGACCCAGATGTATGCATGTGCTTTGTCTaGTTGTGTCTCTCAGTCACC +
Preference number: 5 (lower is better)
Translates to: YLHEDSQAQDDLPMDPDVCMCFV*LCLSVT
Trigger: GGTGACTGAGAGACACAACAAGACAAAGCACATGCA...TACATCTGGGTCCATGGGAAGGTCATCCTGTGCTTGTGAATCTTCATGTAAATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076272.5
ENSMUST00000121265.7
CDS-3UTR CAA 90 bp ATATATTTACATGAAGATTCACAAGCACAGGATGACCTTCCCATGGACCCAGATACCTTTCCCCAGCTGTaGTTCTTTCTGGGAATGCAG +
Preference number: 5 (lower is better)
Translates to: IYLHEDSQAQDDLPMDPDTFPQL*FFLGMQ
Trigger: CTGCATTCCCAGAAAGAACAACAGCTGGGGAAAGGT...ATCTGGGTCCATGGGAAGGTCATCCTGTGCTTGTGAATCTTCATGTAAATATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076272.5
ENSMUST00000121265.7
CDS TCA 90 bp CTCCTGGAAAGACAGCTTCTATATACCAGGCCACAAGGCCATATATaGAAGCATCAGCTAAAAGCATCCCTAGCACGTAGGCAAATAAAA +
Preference number: 5 (lower is better)
Translates to: LLERQLLYTRPQGHI*KHQLKASLARRQIK
Trigger: TTTTATTTGCCTACGTGCTAGGGATGCTTTTAGCTGATGCTTTCATATATGGCCTTGTGGCCTGGTATATAGAAGCTGTCTTTCCAGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076272.5
ENSMUST00000121265.7
CDS TCA 90 bp TCAGTTTTGAGATTTCAGCAATGTCACAGTAAGGTTCCTTCACCATaGCTAGGTGGCTTCCAACACCATATAGTCTTTTCAGGAAGACCG +
Preference number: 5 (lower is better)
Translates to: SVLRFQQCHSKVPSP*LGGFQHHIVFSGRP
Trigger: CGGTCTTCCTGAAAAGACTATATGGTGTTGGAAGCCACCTAGTCATGGTGAAGGAACCTTACTGTGACATTGCTGAAATCTCAAAACTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000076272.5
ENSMUST00000121265.7
CDS-3UTR CAA 90 bp TATTTACATGAAGATTCACAAGCACAGGATGACCTTCCCATGGACCCAGATGTACTGCTGTTTGCAAAGTaGTGGCCAAACACAATAGCA +
Preference number: 5 (lower is better)
Translates to: YLHEDSQAQDDLPMDPDVLLFAK*WPNTIA
Trigger: TGCTATTGTGTTTGGCCACAACTTTGCAAACAGCAG...TACATCTGGGTCCATGGGAAGGTCATCCTGTGCTTGTGAATCTTCATGTAAATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076272.5
ENSMUST00000121265.7
CDS-3UTR CAA 90 bp CAAATATATTTACATGAAGATTCACAAGCACAGGATGACCTTCCCATGGACCCAGAGGATCACTGCTGTTaGCAAAGTTGTGGCCAAACA +
Preference number: 5 (lower is better)
Translates to: QIYLHEDSQAQDDLPMDPEDHCC*QSCGQT
Trigger: TGTTTGGCCACAACTTTGCAAACAGCAGTGATCCTC...TGGGTCCATGGGAAGGTCATCCTGTGCTTGTGAATCTTCATGTAAATATATTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076272.5
ENSMUST00000121265.7
CDS-3UTR CAA 90 bp TATTTACATGAAGATTCACAAGCACAGGATGACCTTCCCATGGACCCAGATGTACAAGGAATTCCTGACTaGATCCATATGCTGGGAGAT +
Preference number: 5 (lower is better)
Translates to: YLHEDSQAQDDLPMDPDVQGIPD*IHMLGD
Trigger: ATCTCCCAGCATATGGATCAAGTCAGGAATTCCTTG...TACATCTGGGTCCATGGGAAGGTCATCCTGTGCTTGTGAATCTTCATGTAAATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076272.5
ENSMUST00000121265.7
CDS-3UTR CAA 90 bp ATATATTTACATGAAGATTCACAAGCACAGGATGACCTTCCCATGGACCCAGATTCAACATCCCCATTCTaGTTCCCTTTGCTTCCTACC +
Preference number: 5 (lower is better)
Translates to: IYLHEDSQAQDDLPMDPDSTSPF*FPLLPT
Trigger: GGTAGGAAGCAAAGGGAACAAGAATGGGGATGTTGA...ATCTGGGTCCATGGGAAGGTCATCCTGTGCTTGTGAATCTTCATGTAAATATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076272.5
ENSMUST00000121265.7
CDS-3UTR CAA 90 bp CAAATATATTTACATGAAGATTCACAAGCACAGGATGACCTTCCCATGGACCCATCAACATCCCCATTCTaGTTCCCTTTGCTTCCTACC +
Preference number: 5 (lower is better)
Translates to: QIYLHEDSQAQDDLPMDPSTSPF*FPLLPT
Trigger: GGTAGGAAGCAAAGGGAACAAGAATGGGGATGTTGA...TGGGTCCATGGGAAGGTCATCCTGTGCTTGTGAATCTTCATGTAAATATATTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076272.5
ENSMUST00000121265.7
CDS-3UTR CAA 90 bp ATATATTTACATGAAGATTCACAAGCACAGGATGACCTTCCCATGGACCCAGATATGTGCTTTGTCTTGTaGTGTCTCTCAGTCACCGTC +
Preference number: 5 (lower is better)
Translates to: IYLHEDSQAQDDLPMDPDMCFVL*CLSVTV
Trigger: GACGGTGACTGAGAGACACAACAAGACAAAGCACAT...ATCTGGGTCCATGGGAAGGTCATCCTGTGCTTGTGAATCTTCATGTAAATATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076272.5
ENSMUST00000121265.7
CDS-3UTR CAA 90 bp ATATATTTACATGAAGATTCACAAGCACAGGATGACCTTCCCATGGACCCAGATATTGAGCAGGAAGGTTaGGGTGGAGTTGGACATGAT +
Preference number: 5 (lower is better)
Translates to: IYLHEDSQAQDDLPMDPDIEQEG*GGVGHD
Trigger: ATCATGTCCAACTCCACCCAAACCTTCCTGCTCAAT...ATCTGGGTCCATGGGAAGGTCATCCTGTGCTTGTGAATCTTCATGTAAATATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076272.5
ENSMUST00000121265.7
CDS-3UTR CAA 90 bp TATTTACATGAAGATTCACAAGCACAGGATGACCTTCCCATGGACCCAGATGTAATACACTTCCCAAGGTaGTACATAGGAAAGAGCAGC +
Preference number: 5 (lower is better)
Translates to: YLHEDSQAQDDLPMDPDVIHFPR*YIGKSS
Trigger: GCTGCTCTTTCCTATGTACAACCTTGGGAAGTGTAT...TACATCTGGGTCCATGGGAAGGTCATCCTGTGCTTGTGAATCTTCATGTAAATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076272.5
ENSMUST00000121265.7
CDS-3UTR CAA 90 bp TATTTACATGAAGATTCACAAGCACAGGATGACCTTCCCATGGACCCAGATGTACCATTATGGATAGCCTaGTACAAAGGGCTTCGCATT +
Preference number: 5 (lower is better)
Translates to: YLHEDSQAQDDLPMDPDVPLWIA*YKGLRI
Trigger: AATGCGAAGCCCTTTGTACAAGGCTATCCATAATGG...TACATCTGGGTCCATGGGAAGGTCATCCTGTGCTTGTGAATCTTCATGTAAATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076272.5
ENSMUST00000121265.7
CDS-3UTR CAA 90 bp TATTTACATGAAGATTCACAAGCACAGGATGACCTTCCCATGGACCCAGATGTAAAAAGACAAGAAGACTaGGTCCAGGGTGATCTGACT +
Preference number: 5 (lower is better)
Translates to: YLHEDSQAQDDLPMDPDVKRQED*VQGDLT
Trigger: AGTCAGATCACCCTGGACCAAGTCTTCTTGTCTTTT...TACATCTGGGTCCATGGGAAGGTCATCCTGTGCTTGTGAATCTTCATGTAAATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000076272.5
ENSMUST00000121265.7
CDS-3UTR CAA 90 bp CAAATATATTTACATGAAGATTCACAAGCACAGGATGACCTTCCCATGGACCCAAACAGTGCTGATAGGTaGGTCAGGAAAATACAGAGC +
Preference number: 5 (lower is better)
Translates to: QIYLHEDSQAQDDLPMDPNSADR*VRKIQS
Trigger: GCTCTGTATTTTCCTGACCAACCTATCAGCACTGTT...TGGGTCCATGGGAAGGTCATCCTGTGCTTGTGAATCTTCATGTAAATATATTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076272.5
ENSMUST00000121265.7
CDS-3UTR CAA 90 bp TATTTACATGAAGATTCACAAGCACAGGATGACCTTCCCATGGACCCAGATGTAAGTATTTTACCTTCTTaGGCAGAGGATCACTGCTGT +
Preference number: 5 (lower is better)
Translates to: YLHEDSQAQDDLPMDPDVSILPS*AEDHCC
Trigger: ACAGCAGTGATCCTCTGCCAAAGAAGGTAAAATACT...TACATCTGGGTCCATGGGAAGGTCATCCTGTGCTTGTGAATCTTCATGTAAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076272.5
ENSMUST00000121265.7
CDS-3UTR CAA 90 bp CAAATATATTTACATGAAGATTCACAAGCACAGGATGACCTTCCCATGGACCCAGGCGCAGGTTCAATCTaGACAAATAAAACCATGCAC +
Preference number: 5 (lower is better)
Translates to: QIYLHEDSQAQDDLPMDPGAGSI*TNKTMH
Trigger: GTGCATGGTTTTATTTGTCAAGATTGAACCTGCGCC...TGGGTCCATGGGAAGGTCATCCTGTGCTTGTGAATCTTCATGTAAATATATTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076272.5
ENSMUST00000121265.7
CDS-3UTR CAA 90 bp ATATATTTACATGAAGATTCACAAGCACAGGATGACCTTCCCATGGACCCAGATGGCGCAGGTTCAATCTaGACAAATAAAACCATGCAC +
Preference number: 5 (lower is better)
Translates to: IYLHEDSQAQDDLPMDPDGAGSI*TNKTMH
Trigger: GTGCATGGTTTTATTTGTCAAGATTGAACCTGCGCC...ATCTGGGTCCATGGGAAGGTCATCCTGTGCTTGTGAATCTTCATGTAAATATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076272.5
ENSMUST00000121265.7
CDS-3UTR CAA 90 bp TATTTACATGAAGATTCACAAGCACAGGATGACCTTCCCATGGACCCAGATGTACTGCTGTCAAATCAGTaGGTTCAGCTTCAAAGTACT +
Preference number: 5 (lower is better)
Translates to: YLHEDSQAQDDLPMDPDVLLSNQ*VQLQST
Trigger: AGTACTTTGAAGCTGAACCAACTGATTTGACAGCAG...TACATCTGGGTCCATGGGAAGGTCATCCTGTGCTTGTGAATCTTCATGTAAATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076272.5
ENSMUST00000121265.7
CDS-3UTR CAA 90 bp CAAATATATTTACATGAAGATTCACAAGCACAGGATGACCTTCCCATGGACCCATCTTTGATGGCGACCTaGGTGGTGTTATTCTTTTGG +
Preference number: 5 (lower is better)
Translates to: QIYLHEDSQAQDDLPMDPSLMAT*VVLFFW
Trigger: CCAAAAGAATAACACCACCAAGGTCGCCATCAAAGA...TGGGTCCATGGGAAGGTCATCCTGTGCTTGTGAATCTTCATGTAAATATATTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076272.5
ENSMUST00000121265.7
CDS-3UTR CAA 90 bp CAAATATATTTACATGAAGATTCACAAGCACAGGATGACCTTCCCATGGACCCAAAGGTTTGGGTGGAGTaGGACATGATGGTTGATATC +
Preference number: 5 (lower is better)
Translates to: QIYLHEDSQAQDDLPMDPKVWVE*DMMVDI
Trigger: GATATCAACCATCATGTCCAACTCCACCCAAACCTT...TGGGTCCATGGGAAGGTCATCCTGTGCTTGTGAATCTTCATGTAAATATATTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076272.5
ENSMUST00000121265.7
CDS-3UTR CAA 90 bp ATATATTTACATGAAGATTCACAAGCACAGGATGACCTTCCCATGGACCCAGATCCATTATGGATAGCCTaGTACAAAGGGCTTCGCATT +
Preference number: 5 (lower is better)
Translates to: IYLHEDSQAQDDLPMDPDPLWIA*YKGLRI
Trigger: AATGCGAAGCCCTTTGTACAAGGCTATCCATAATGG...ATCTGGGTCCATGGGAAGGTCATCCTGTGCTTGTGAATCTTCATGTAAATATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076272.5
ENSMUST00000121265.7
CDS-3UTR CAA 90 bp ATATATTTACATGAAGATTCACAAGCACAGGATGACCTTCCCATGGACCCAGATAAAAGACAAGAAGACTaGGTCCAGGGTGATCTGACT +
Preference number: 5 (lower is better)
Translates to: IYLHEDSQAQDDLPMDPDKRQED*VQGDLT
Trigger: AGTCAGATCACCCTGGACCAAGTCTTCTTGTCTTTT...ATCTGGGTCCATGGGAAGGTCATCCTGTGCTTGTGAATCTTCATGTAAATATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076272.5
ENSMUST00000121265.7
CDS GCA 90 bp TCTCAGGTAGTATTTTACCTTCTTTGGCAGAGGATCACTGCTGTTTaGAAAGTTGTGGCCAAACACAATAGCAGCCAGAATATTTCTAGA +
Preference number: 5 (lower is better)
Translates to: SQVVFYLLWQRITAV*KVVAKHNSSQNISR
Trigger: TCTAGAAATATTCTGGCTGCTATTGTGTTTGGCCACAACTTTGCAAACAGCAGTGATCCTCTGCCAAAGAAGGTAAAATACTACCTGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076272.5
ENSMUST00000121265.7
CDS CCA 90 bp CCCTCCAAATATTTGAGTAGGTCACCTTGTACTTCCTTGAGTTGGTaGTTGCCAGGTTTTAGCATATTCTCAAGGTGTGTTAAAAGACTT +
Preference number: 5 (lower is better)
Translates to: PSKYLSRSPCTSLSW*LPGFSIFSRCVKRL
Trigger: AAGTCTTTTAACACACCTTGAGAATATGCTAAAACCTGGCAACCACCAACTCAAGGAAGTACAAGGTGACCTACTCAAATATTTGGAGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000076272.5
ENSMUST00000121265.7
CDS-3UTR CAA 90 bp CAAATATATTTACATGAAGATTCACAAGCACAGGATGACCTTCCCATGGACCCACTGCTGTCAAATCAGTaGGTTCAGCTTCAAAGTACT +
Preference number: 5 (lower is better)
Translates to: QIYLHEDSQAQDDLPMDPLLSNQ*VQLQST
Trigger: AGTACTTTGAAGCTGAACCAACTGATTTGACAGCAG...TGGGTCCATGGGAAGGTCATCCTGTGCTTGTGAATCTTCATGTAAATATATTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076272.5
ENSMUST00000121265.7
CDS-3UTR CAA 90 bp CAAATATATTTACATGAAGATTCACAAGCACAGGATGACCTTCCCATGGACCCAAATGCCAAGATTTTCTaGGTTCTCTTCCAGAGCAGT +
Preference number: 5 (lower is better)
Translates to: QIYLHEDSQAQDDLPMDPNAKIF*VLFQSS
Trigger: ACTGCTCTGGAAGAGAACCAAGAAAATCTTGGCATT...TGGGTCCATGGGAAGGTCATCCTGTGCTTGTGAATCTTCATGTAAATATATTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076272.5
ENSMUST00000121265.7
CDS-3UTR CAA 90 bp ATATATTTACATGAAGATTCACAAGCACAGGATGACCTTCCCATGGACCCAGATAATGCCAAGATTTTCTaGGTTCTCTTCCAGAGCAGT +
Preference number: 5 (lower is better)
Translates to: IYLHEDSQAQDDLPMDPDNAKIF*VLFQSS
Trigger: ACTGCTCTGGAAGAGAACCAAGAAAATCTTGGCATT...ATCTGGGTCCATGGGAAGGTCATCCTGTGCTTGTGAATCTTCATGTAAATATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076272.5
ENSMUST00000121265.7
CDS-3UTR CAA 90 bp ATATATTTACATGAAGATTCACAAGCACAGGATGACCTTCCCATGGACCCAGATGTTTTACCTGCTCCATaGAATCCAAGTAACCCAAAG +
Preference number: 5 (lower is better)
Translates to: IYLHEDSQAQDDLPMDPDVLPAP*NPSNPK
Trigger: CTTTGGGTTACTTGGATTCAATGGAGCAGGTAAAAC...ATCTGGGTCCATGGGAAGGTCATCCTGTGCTTGTGAATCTTCATGTAAATATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076272.5
ENSMUST00000121265.7
CDS CCA 90 bp TTTCCCTCCAAATATTTGAGTAGGTCACCTTGTACTTCCTTGAGTTaGTGGTTGCCAGGTTTTAGCATATTCTCAAGGTGTGTTAAAAGA +
Preference number: 5 (lower is better)
Translates to: FPSKYLSRSPCTSLS*WLPGFSIFSRCVKR
Trigger: TCTTTTAACACACCTTGAGAATATGCTAAAACCTGGCAACCACCAACTCAAGGAAGTACAAGGTGACCTACTCAAATATTTGGAGGGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000076272.5
ENSMUST00000121265.7
CDS-3UTR CAA 90 bp CAAATATATTTACATGAAGATTCACAAGCACAGGATGACCTTCCCATGGACCCAAAAAGACTAATGTCATaGAAGAGTGCTGCTGCATCA +
Preference number: 5 (lower is better)
Translates to: QIYLHEDSQAQDDLPMDPKRLMS*KSAAAS
Trigger: TGATGCAGCAGCACTCTTCAATGACATTAGTCTTTT...TGGGTCCATGGGAAGGTCATCCTGTGCTTGTGAATCTTCATGTAAATATATTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000076272.5
ENSMUST00000121265.7
CDS-3UTR CAA 90 bp ATATATTTACATGAAGATTCACAAGCACAGGATGACCTTCCCATGGACCCAGATAAAAGACTAATGTCATaGAAGAGTGCTGCTGCATCA +
Preference number: 5 (lower is better)
Translates to: IYLHEDSQAQDDLPMDPDKRLMS*KSAAAS
Trigger: TGATGCAGCAGCACTCTTCAATGACATTAGTCTTTT...ATCTGGGTCCATGGGAAGGTCATCCTGTGCTTGTGAATCTTCATGTAAATATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076272.5
ENSMUST00000121265.7
CDS-3UTR CAA 90 bp TATTTACATGAAGATTCACAAGCACAGGATGACCTTCCCATGGACCCAGATGTAAGGAATGAATCAGTTTaGAGATTTCAGCAATGTCAC +
Preference number: 5 (lower is better)
Translates to: YLHEDSQAQDDLPMDPDVRNESV*RFQQCH
Trigger: GTGACATTGCTGAAATCTCAAAACTGATTCATTCCT...TACATCTGGGTCCATGGGAAGGTCATCCTGTGCTTGTGAATCTTCATGTAAATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076272.5
ENSMUST00000121265.7
CDS-3UTR CAA 90 bp CAAATATATTTACATGAAGATTCACAAGCACAGGATGACCTTCCCATGGACCCATTCTTTGCGTCTGTATaGACTAGGAATCTAAATCCA +
Preference number: 5 (lower is better)
Translates to: QIYLHEDSQAQDDLPMDPFFASV*TRNLNP
Trigger: TGGATTTAGATTCCTAGTCAATACAGACGCAAAGAA...TGGGTCCATGGGAAGGTCATCCTGTGCTTGTGAATCTTCATGTAAATATATTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076272.5
ENSMUST00000121265.7
CDS-3UTR CAA 90 bp ATATATTTACATGAAGATTCACAAGCACAGGATGACCTTCCCATGGACCCAGATTTCTTTTGGAATACCTaGTGTAGGTGTTTGATCTGT +
Preference number: 5 (lower is better)
Translates to: IYLHEDSQAQDDLPMDPDFFWNT*CRCLIC
Trigger: ACAGATCAAACACCTACACAAGGTATTCCAAAAGAA...ATCTGGGTCCATGGGAAGGTCATCCTGTGCTTGTGAATCTTCATGTAAATATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076272.5
ENSMUST00000121265.7
CDS-3UTR CAA 90 bp CAAATATATTTACATGAAGATTCACAAGCACAGGATGACCTTCCCATGGACCCACTCAAGATACATCTTTaGAGGTACTCCTTTTATCCT +
Preference number: 5 (lower is better)
Translates to: QIYLHEDSQAQDDLPMDPLKIHL*RYSFYP
Trigger: AGGATAAAAGGAGTACCTCAAAAGATGTATCTTGAG...TGGGTCCATGGGAAGGTCATCCTGTGCTTGTGAATCTTCATGTAAATATATTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076272.5
ENSMUST00000121265.7
CDS-3UTR CAA 90 bp ATATATTTACATGAAGATTCACAAGCACAGGATGACCTTCCCATGGACCCAGATGACATGAAAAGAATGTaGTCTAAAACTGTCAGGGAT +
Preference number: 5 (lower is better)
Translates to: IYLHEDSQAQDDLPMDPDDMKRM*SKTVRD
Trigger: ATCCCTGACAGTTTTAGACAACATTCTTTTCATGTC...ATCTGGGTCCATGGGAAGGTCATCCTGTGCTTGTGAATCTTCATGTAAATATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000076272.5
ENSMUST00000121265.7
CDS-3UTR CAA 90 bp CAAATATATTTACATGAAGATTCACAAGCACAGGATGACCTTCCCATGGACCCAGACATGAAAAGAATGTaGTCTAAAACTGTCAGGGAT +
Preference number: 5 (lower is better)
Translates to: QIYLHEDSQAQDDLPMDPDMKRM*SKTVRD
Trigger: ATCCCTGACAGTTTTAGACAACATTCTTTTCATGTC...TGGGTCCATGGGAAGGTCATCCTGTGCTTGTGAATCTTCATGTAAATATATTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000076272.5
ENSMUST00000121265.7
CDS-3UTR CAA 90 bp ATATATTTACATGAAGATTCACAAGCACAGGATGACCTTCCCATGGACCCAGATCAGCAAAGCATCAAATaGAGGACAATAGCCAATTTT +
Preference number: 5 (lower is better)
Translates to: IYLHEDSQAQDDLPMDPDQQSIK*RTIANF
Trigger: AAAATTGGCTATTGTCCTCAATTTGATGCTTTGCTG...ATCTGGGTCCATGGGAAGGTCATCCTGTGCTTGTGAATCTTCATGTAAATATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076272.5
ENSMUST00000121265.7
CDS-3UTR CAA 90 bp CAAATATATTTACATGAAGATTCACAAGCACAGGATGACCTTCCCATGGACCCACAGCAAAGCATCAAATaGAGGACAATAGCCAATTTT +
Preference number: 5 (lower is better)
Translates to: QIYLHEDSQAQDDLPMDPQQSIK*RTIANF
Trigger: AAAATTGGCTATTGTCCTCAATTTGATGCTTTGCTG...TGGGTCCATGGGAAGGTCATCCTGTGCTTGTGAATCTTCATGTAAATATATTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076272.5
ENSMUST00000121265.7
CDS TCA 90 bp GTTCAGCTTCAAAGTACTTGCTTTCAACTCTCTCATAAAATTGGGTaGTTTCTAGTTTTTGTTGAGGTGGTTCTCCAAACCAGTAAGAGT +
Preference number: 5 (lower is better)
Translates to: VQLQSTCFQLSHKIG*FLVFVEVVLQTSKS
Trigger: ACTCTTACTGGTTTGGAGAACCACCTCAACAAAAACTAGAAATCACCCAATTTTATGAGAGAGTTGAAAGCAAGTACTTTGAAGCTGAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000076272.5
ENSMUST00000121265.7
CDS CCA 90 bp GTTCTTCTTAATATCACTAAATCTCAGGTAGTATTTTACCTTCTTTaGCAGAGGATCACTGCTGTTTGCAAAGTTGTGGCCAAACACAAT +
Preference number: 5 (lower is better)
Translates to: VLLNITKSQVVFYLL*QRITAVCKVVAKHN
Trigger: ATTGTGTTTGGCCACAACTTTGCAAACAGCAGTGATCCTCTGCCAAAGAAGGTAAAATACTACCTGAGATTTAGTGATATTAAGAAGAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076272.5
ENSMUST00000121265.7
CDS CAA 90 bp GAGGCTGGGTCCATGCCAGATGTCGGCTCATCAAGTATCGCCACCTaGGAGCCCCCTATCAGGGCTATAATGATGGCGAGTTTGCGCTTC +
Preference number: 6 (lower is better)
Translates to: EAGSMPDVGSSSIAT*EPPIRAIMMASLRF
Trigger: GAAGCGCAAACTCGCCATCATTATAGCCCTGATAGGGGGCTCCAAGGTGGCGATACTTGATGAGCCGACATCTGGCATGGACCCAGCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000076272.5
ENSMUST00000121265.7
CDS TCA 72 bp GACATAGGCCTCTCCACTGGTCGGAGGATAGAGACCTaGGAGGATGGACAGAGTAGTGGATTTTCCTGCCCC +
Preference number: 6 (lower is better)
Translates to: DIGLSTGRRIET*EDGQSSGFSCP
Trigger: GGGGCAGGAAAATCCACTACTCTGTCCATCCTCTCAGGTCTCTATCCTCCGACCAGTGGAGAGGCCTATGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076272.5
ENSMUST00000121265.7
CDS CAA 72 bp AAGCCTACTCTCCCGCTGCTTTCAACATCCCCATTCTaGTTCCCTTTGCTTCCTACCGAGGGCGACTGGGTA +
Preference number: 6 (lower is better)
Translates to: KPTLPLLSTSPF*FPLLPTEGDWV
Trigger: TACCCAGTCGCCCTCGGTAGGAAGCAAAGGGAACAAGAATGGGGATGTTGAAAGCAGCGGGAGAGTAGGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076272.5
ENSMUST00000121265.7
CDS CAA 90 bp GCCAGTACACAAGGATGGAGACCCCACTCAGAAACTGCATGTGCTTaGTCTTGTTGTGTCTCTCAGTCACCGTCAGGATGCAAAAGCCAC +
Preference number: 6 (lower is better)
Translates to: ASTQGWRPHSETACA*SCCVSQSPSGCKSH
Trigger: GTGGCTTTTGCATCCTGACGGTGACTGAGAGACACAACAAGACAAAGCACATGCAGTTTCTGAGTGGGGTCTCCATCCTTGTGTACTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000076272.5
ENSMUST00000121265.7
CDS GCA 72 bp AGTCAAAGGACCAGATCAGCTTCTGCTTGGATGGCATaGGCTCAAAGCTCTGATGCATTGCAACAGCTGGGA +
Preference number: 6 (lower is better)
Translates to: SQRTRSASAWMA*AQSSDALQQLG
Trigger: TCCCAGCTGTTGCAATGCATCAGAGCTTTGAGCGCATGCCATCCAAGCAGAAGCTGATCTGGTCCTTTGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076272.5
ENSMUST00000121265.7
CDS GCA 72 bp GATCTTCACTCTGGGTGGGAAAGCCTACTCTCCCGCTaGTTTCAACATCCCCATTCTTGTTCCCTTTGCTTC +
Preference number: 6 (lower is better)
Translates to: DLHSGWESLLSR*FQHPHSCSLCF
Trigger: GAAGCAAAGGGAACAAGAATGGGGATGTTGAAAGCAGCGGGAGAGTAGGCTTTCCCACCCAGAGTGAAGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076272.5
ENSMUST00000121265.7
CDS CAA 72 bp CAAGGATGGAGACCCCACTCAGAAACTGCATGTGCTTaGTCTTGTTGTGTCTCTCAGTCACCGTCAGGATGC +
Preference number: 6 (lower is better)
Translates to: QGWRPHSETACA*SCCVSQSPSGC
Trigger: GCATCCTGACGGTGACTGAGAGACACAACAAGACAAAGCACATGCAGTTTCTGAGTGGGGTCTCCATCCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076272.5
ENSMUST00000121265.7
CDS CAA 90 bp TACACAAGGATGGAGACCCCACTCAGAAACTGCATGTGCTTTGTCTaGTTGTGTCTCTCAGTCACCGTCAGGATGCAAAAGCCACTGACC +
Preference number: 6 (lower is better)
Translates to: YTRMETPLRNCMCFV*LCLSVTVRMQKPLT
Trigger: GGTCAGTGGCTTTTGCATCCTGACGGTGACTGAGAGACACAACAAGACAAAGCACATGCAGTTTCTGAGTGGGGTCTCCATCCTTGTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000076272.5
ENSMUST00000121265.7
CDS TCA 72 bp ATGTCATTGAAGAGTGCTGCTGCATCAGCTCCACCATaGTGTAGCATGATGGCCTTGTCTAGGGCATGTTGC +
Preference number: 6 (lower is better)
Translates to: MSLKSAAASAPP*CSMMALSRACC
Trigger: GCAACATGCCCTAGACAAGGCCATCATGCTACATCATGGTGGAGCTGATGCAGCAGCACTCTTCAATGACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076272.5
ENSMUST00000121265.7
CDS GCA 72 bp AGCCAGTACACAAGGATGGAGACCCCACTCAGAAACTaGATGTGCTTTGTCTTGTTGTGTCTCTCAGTCACC +
Preference number: 6 (lower is better)
Translates to: SQYTRMETPLRN*MCFVLLCLSVT
Trigger: GGTGACTGAGAGACACAACAAGACAAAGCACATGCAGTTTCTGAGTGGGGTCTCCATCCTTGTGTACTGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076272.5
ENSMUST00000121265.7
CDS CCA 72 bp ATCTGTACTCCCCGGCCATTCTTTCCTCTGGGGGCTTaGCTGAGGTTTATTGAAGACTGTTATGGAAGCATC +
Preference number: 6 (lower is better)
Translates to: ICTPRPFFPLGA*LRFIEDCYGSI
Trigger: GATGCTTCCATAACAGTCTTCAATAAACCTCAGCCAAGCCCCCAGAGGAAAGAATGGCCGGGGAGTACAGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000076272.5
ENSMUST00000121265.7
CDS CAA 72 bp TTCCCAAGGTTGTACATAGGAAAGAGCAGCAGCGCATaGAGCAGGAAGGTTTGGGTGGAGTTGGACATGATG +
Preference number: 6 (lower is better)
Translates to: FPRLYIGKSSSA*SRKVWVELDMM
Trigger: CATCATGTCCAACTCCACCCAAACCTTCCTGCTCAATGCGCTGCTGCTCTTTCCTATGTACAACCTTGGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076272.5
ENSMUST00000121265.7
CDS CCA 72 bp ACCCAGGACTGCCTCCGTCTGCTTCATATGGGTTTCTaGGTCCCACAAGACGCAAAGAATGAAAGAGAAATT +
Preference number: 6 (lower is better)
Translates to: TQDCLRLLHMGF*VPQDAKNEREI
Trigger: AATTTCTCTTTCATTCTTTGCGTCTTGTGGGACCCAGAAACCCATATGAAGCAGACGGAGGCAGTCCTGGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076272.5
ENSMUST00000121265.7
CDS CCA 72 bp ATAGGAAAGAGCAGCAGCGCATTGAGCAGGAAGGTTTaGGTGGAGTTGGACATGATGGTTGATATCCTTGCT +
Preference number: 6 (lower is better)
Translates to: IGKSSSALSRKV*VELDMMVDILA
Trigger: AGCAAGGATATCAACCATCATGTCCAACTCCACCCAAACCTTCCTGCTCAATGCGCTGCTGCTCTTTCCTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076272.5
ENSMUST00000121265.7
CDS CAA 72 bp ATGGAGACCCCACTCAGAAACTGCATGTGCTTTGTCTaGTTGTGTCTCTCAGTCACCGTCAGGATGCAAAAG +
Preference number: 6 (lower is better)
Translates to: METPLRNCMCFV*LCLSVTVRMQK
Trigger: CTTTTGCATCCTGACGGTGACTGAGAGACACAACAAGACAAAGCACATGCAGTTTCTGAGTGGGGTCTCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000076272.5
ENSMUST00000121265.7
CDS CAA 90 bp CTGATACACTTCCCAAGGTTGTACATAGGAAAGAGCAGCAGCGCATaGAGCAGGAAGGTTTGGGTGGAGTTGGACATGATGGTTGATATC +
Preference number: 6 (lower is better)
Translates to: LIHFPRLYIGKSSSA*SRKVWVELDMMVDI
Trigger: GATATCAACCATCATGTCCAACTCCACCCAAACCTTCCTGCTCAATGCGCTGCTGCTCTTTCCTATGTACAACCTTGGGAAGTGTATCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076272.5
ENSMUST00000121265.7
CDS TCA 72 bp GCCATTCTTTCCTCTGGGGGCTTGGCTGAGGTTTATTaGAGACTGTTATGGAAGCATCAGAACCAGAAAGTG +
Preference number: 6 (lower is better)
Translates to: AILSSGGLAEVY*RLLWKHQNQKV
Trigger: CACTTTCTGGTTCTGATGCTTCCATAACAGTCTTCAATAAACCTCAGCCAAGCCCCCAGAGGAAAGAATGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000076272.5
ENSMUST00000121265.7
CDS CCA 72 bp GATCAAATACCAGAGCAGAAAGCCAGTACACAAGGATaGAGACCCCACTCAGAAACTGCATGTGCTTTGTCT +
Preference number: 6 (lower is better)
Translates to: DQIPEQKASTQG*RPHSETACALS
Trigger: AGACAAAGCACATGCAGTTTCTGAGTGGGGTCTCCATCCTTGTGTACTGGCTTTCTGCTCTGGTATTTGATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076272.5
ENSMUST00000121265.7
CDS CAA 72 bp AGCAGCAGCGCATTGAGCAGGAAGGTTTGGGTGGAGTaGGACATGATGGTTGATATCCTTGCTTCTATTATG +
Preference number: 6 (lower is better)
Translates to: SSSALSRKVWVE*DMMVDILASIM
Trigger: CATAATAGAAGCAAGGATATCAACCATCATGTCCAACTCCACCCAAACCTTCCTGCTCAATGCGCTGCTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076272.5
ENSMUST00000121265.7
CDS CAA 90 bp ATAGGAAAGAGCAGCAGCGCATTGAGCAGGAAGGTTTGGGTGGAGTaGGACATGATGGTTGATATCCTTGCTTCTATTATGGTATCCATT +
Preference number: 6 (lower is better)
Translates to: IGKSSSALSRKVWVE*DMMVDILASIMVSI
Trigger: AATGGATACCATAATAGAAGCAAGGATATCAACCATCATGTCCAACTCCACCCAAACCTTCCTGCTCAATGCGCTGCTGCTCTTTCCTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076272.5
ENSMUST00000121265.7
CDS CCA 72 bp CCATTGAATCCAAGTAACCCAAAGCACGCCCTCTCTTaGATAGCAAGGGAGATATTTTTCACAGCCAGAATT +
Preference number: 6 (lower is better)
Translates to: PLNPSNPKHALS*IAREIFFTARI
Trigger: AATTCTGGCTGTGAAAAATATCTCCCTTGCTATCCAAGAGAGGGCGTGCTTTGGGTTACTTGGATTCAATGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000076272.5
ENSMUST00000121265.7
CDS CAA 72 bp CCAGGGTGGCTGTTGGGACATAGGAATGAATCAGTTTaGAGATTTCAGCAATGTCACAGTAAGGTTCCTTCA +
Preference number: 6 (lower is better)
Translates to: PGWLLGHRNESV*RFQQCHSKVPS
Trigger: TGAAGGAACCTTACTGTGACATTGCTGAAATCTCAAAACTGATTCATTCCTATGTCCCAACAGCCACCCTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076272.5
ENSMUST00000121265.7
CDS CAA 90 bp ACTGGTGACAGAGGCTCGGAAGAAGGAAGGAACAGTGCTGATAGGTaGGTCAGGAAAATACAGAGCTTCAATCTTCTTTATACTAAGAAG +
Preference number: 6 (lower is better)
Translates to: TGDRGSEEGRNSADR*VRKIQSFNLLYTKK
Trigger: CTTCTTAGTATAAAGAAGATTGAAGCTCTGTATTTTCCTGACCAACCTATCAGCACTGTTCCTTCCTTCTTCCGAGCCTCTGTCACCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000076272.5
ENSMUST00000121265.7
ENSMUST00000207220.2
CDS GCA 72 bp GTATTTTACCTTCTTTGGCAGAGGATCACTGCTGTTTaGAAAGTTGTGGCCAAACACAATAGCAGCCAGAAT +
Preference number: 6 (lower is better)
Translates to: VFYLLWQRITAV*KVVAKHNSSQN
Trigger: ATTCTGGCTGCTATTGTGTTTGGCCACAACTTTGCAAACAGCAGTGATCCTCTGCCAAAGAAGGTAAAATAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076272.5
ENSMUST00000121265.7
CDS CCA 72 bp GAGGCTCGGAAGAAGGAAGGAACAGTGCTGATAGGTTaGTCAGGAAAATACAGAGCTTCAATCTTCTTTATA +
Preference number: 6 (lower is better)
Translates to: EARKKEGTVLIG*SGKYRASIFFI
Trigger: TATAAAGAAGATTGAAGCTCTGTATTTTCCTGACCAACCTATCAGCACTGTTCCTTCCTTCTTCCGAGCCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000076272.5
ENSMUST00000121265.7
ENSMUST00000207220.2
CDS CCA 72 bp ACCCAGAACATCCAGTTTCTCAGTCCTATCATGAGCTaGTATTCCTTTAATCGGTTTTCCTTTTCCCACACA +
Preference number: 6 (lower is better)
Translates to: TQNIQFLSPIMS*YSFNRFSFSHT
Trigger: TGTGTGGGAAAAGGAAAACCGATTAAAGGAATACCAGCTCATGATAGGACTGAGAAACTGGATGTTCTGGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000076272.5
ENSMUST00000121265.7
CDS CAA 72 bp ATGGCGACCTTGGTGGTGTTATTCTTTTGGAATACCTaGTGTAGGTGTTTGATCTGTATGCCTGCTGTCAAA +
Preference number: 6 (lower is better)
Translates to: MATLVVLFFWNT*CRCLICMPAVK
Trigger: TTTGACAGCAGGCATACAGATCAAACACCTACACAAGGTATTCCAAAAGAATAACACCACCAAGGTCGCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076272.5
ENSMUST00000121265.7
CDS CAA 72 bp CCCTCCAAATATTTGAGTAGGTCACCTTGTACTTCCTaGAGTTGGTGGTTGCCAGGTTTTAGCATATTCTCA +
Preference number: 6 (lower is better)
Translates to: PSKYLSRSPCTS*SWWLPGFSIFS
Trigger: TGAGAATATGCTAAAACCTGGCAACCACCAACTCAAGGAAGTACAAGGTGACCTACTCAAATATTTGGAGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076272.5
ENSMUST00000121265.7
CDS CAA 90 bp TCGTCATTTCCCTCCAAATATTTGAGTAGGTCACCTTGTACTTCCTaGAGTTGGTGGTTGCCAGGTTTTAGCATATTCTCAAGGTGTGTT +
Preference number: 6 (lower is better)
Translates to: SSFPSKYLSRSPCTS*SWWLPGFSIFSRCV
Trigger: AACACACCTTGAGAATATGCTAAAACCTGGCAACCACCAACTCAAGGAAGTACAAGGTGACCTACTCAAATATTTGGAGGGAAATGACGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076272.5
ENSMUST00000121265.7
CDS TCA 72 bp AGATTTCAGCAATGTCACAGTAAGGTTCCTTCACCATaGCTAGGTGGCTTCCAACACCATATAGTCTTTTCA +
Preference number: 6 (lower is better)
Translates to: RFQQCHSKVPSP*LGGFQHHIVFS
Trigger: TGAAAAGACTATATGGTGTTGGAAGCCACCTAGTCATGGTGAAGGAACCTTACTGTGACATTGCTGAAATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076272.5
ENSMUST00000121265.7
CDS CCA 72 bp AAGTCTTTGATGGCGACCTTGGTGGTGTTATTCTTTTaGAATACCTTGTGTAGGTGTTTGATCTGTATGCCT +
Preference number: 6 (lower is better)
Translates to: KSLMATLVVLFF*NTLCRCLICMP
Trigger: AGGCATACAGATCAAACACCTACACAAGGTATTCCAAAAGAATAACACCACCAAGGTCGCCATCAAAGACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076272.5
ENSMUST00000121265.7
CDS CCA 72 bp TATTTGAGTAGGTCACCTTGTACTTCCTTGAGTTGGTaGTTGCCAGGTTTTAGCATATTCTCAAGGTGTGTT +
Preference number: 6 (lower is better)
Translates to: YLSRSPCTSLSW*LPGFSIFSRCV
Trigger: AACACACCTTGAGAATATGCTAAAACCTGGCAACCACCAACTCAAGGAAGTACAAGGTGACCTACTCAAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076272.5
ENSMUST00000121265.7
CDS CAA 72 bp GTGACCTGTCCCTCATATAAGTTCAAAGACAAGTCTTaGATGGCGACCTTGGTGGTGTTATTCTTTTGGAAT +
Preference number: 6 (lower is better)
Translates to: VTCPSYKFKDKS*MATLVVLFFWN
Trigger: ATTCCAAAAGAATAACACCACCAAGGTCGCCATCAAAGACTTGTCTTTGAACTTATATGAGGGACAGGTCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076272.5
ENSMUST00000121265.7
CDS CAA 72 bp TTGAGTAGGTCACCTTGTACTTCCTTGAGTTGGTGGTaGCCAGGTTTTAGCATATTCTCAAGGTGTGTTAAA +
Preference number: 6 (lower is better)
Translates to: LSRSPCTSLSWW*PGFSIFSRCVK
Trigger: TTTAACACACCTTGAGAATATGCTAAAACCTGGCAACCACCAACTCAAGGAAGTACAAGGTGACCTACTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076272.5
ENSMUST00000121265.7
CDS CAA 90 bp AGAAGAACAGTGACCTGTCCCTCATATAAGTTCAAAGACAAGTCTTaGATGGCGACCTTGGTGGTGTTATTCTTTTGGAATACCTTGTGT +
Preference number: 6 (lower is better)
Translates to: RRTVTCPSYKFKDKS*MATLVVLFFWNTLC
Trigger: ACACAAGGTATTCCAAAAGAATAACACCACCAAGGTCGCCATCAAAGACTTGTCTTTGAACTTATATGAGGGACAGGTCACTGTTCTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076272.5
ENSMUST00000121265.7
CDS CAA 72 bp GTGGTGTTATTCTTTTGGAATACCTTGTGTAGGTGTTaGATCTGTATGCCTGCTGTCAAATCAGTTGGTTCA +
Preference number: 6 (lower is better)
Translates to: VVLFFWNTLCRC*ICMPAVKSVGS
Trigger: TGAACCAACTGATTTGACAGCAGGCATACAGATCAAACACCTACACAAGGTATTCCAAAAGAATAACACCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076272.5
ENSMUST00000121265.7
CDS CAA 72 bp GATAGACACACCAAAGCTAGAAATGCCAAGATTTTCTaGGTTCTCTTCCAGAGCAGTAAAGAGAGCTTCAAA +
Preference number: 6 (lower is better)
Translates to: DRHTKARNAKIF*VLFQSSKESFK
Trigger: TTTGAAGCTCTCTTTACTGCTCTGGAAGAGAACCAAGAAAATCTTGGCATTTCTAGCTTTGGTGTGTCTATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076272.5
ENSMUST00000121265.7
CDS CAA 90 bp TCCAAATATTTGAGTAGGTCACCTTGTACTTCCTTGAGTTGGTGGTaGCCAGGTTTTAGCATATTCTCAAGGTGTGTTAAAAGACTTGAT +
Preference number: 6 (lower is better)
Translates to: SKYLSRSPCTSLSWW*PGFSIFSRCVKRLD
Trigger: ATCAAGTCTTTTAACACACCTTGAGAATATGCTAAAACCTGGCAACCACCAACTCAAGGAAGTACAAGGTGACCTACTCAAATATTTGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000076272.5
ENSMUST00000121265.7
CDS CCA 72 bp AAATACAGAGCTTCAATCTTCTTTATACTAAGAAGGTaGCGTGTTGTCAAAAGCACAATGCTGAGCAAAAGC +
Preference number: 6 (lower is better)
Translates to: KYRASIFFILRR*RVVKSTMLSKS
Trigger: GCTTTTGCTCAGCATTGTGCTTTTGACAACACGCCACCTTCTTAGTATAAAGAAGATTGAAGCTCTGTATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000076272.5
ENSMUST00000121265.7
ENSMUST00000207220.2
CDS CAA 72 bp TTACTCCATTTCATTCCAGTTTTCTTTGCGTCTGTATaGACTAGGAATCTAAATCCAAACGCCATCCCAACA +
Preference number: 6 (lower is better)
Translates to: LLHFIPVFFASV*TRNLNPNAIPT
Trigger: TGTTGGGATGGCGTTTGGATTTAGATTCCTAGTCAATACAGACGCAAAGAAAACTGGAATGAAATGGAGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076272.5
ENSMUST00000121265.7
CDS CAA 72 bp TCATATAAGTTCAAAGACAAGTCTTTGATGGCGACCTaGGTGGTGTTATTCTTTTGGAATACCTTGTGTAGG +
Preference number: 6 (lower is better)
Translates to: SYKFKDKSLMAT*VVLFFWNTLCR
Trigger: CCTACACAAGGTATTCCAAAAGAATAACACCACCAAGGTCGCCATCAAAGACTTGTCTTTGAACTTATATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076272.5
ENSMUST00000121265.7
CDS CAA 90 bp TCTTCCAGAGCAGTAAAGAGAGCTTCAAACCTGTGTGTATATTCTTaGGGTAGAATAAAAGATAACTCATTTCCAACATTAGTCTCCAGG +
Preference number: 6 (lower is better)
Translates to: SSRAVKRASNLCVYS*GRIKDNSFPTLVSR
Trigger: CCTGGAGACTAATGTTGGAAATGAGTTATCTTTTATTCTACCCAAAGAATATACACACAGGTTTGAAGCTCTCTTTACTGCTCTGGAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076272.5
ENSMUST00000121265.7
CDS TCA 72 bp CAAAGTACTTGCTTTCAACTCTCTCATAAAATTGGGTaGTTTCTAGTTTTTGTTGAGGTGGTTCTCCAAACC +
Preference number: 6 (lower is better)
Translates to: QSTCFQLSHKIG*FLVFVEVVLQT
Trigger: GGTTTGGAGAACCACCTCAACAAAAACTAGAAATCACCCAATTTTATGAGAGAGTTGAAAGCAAGTACTTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000076272.5
ENSMUST00000121265.7
CDS CCA 72 bp CTTAAAGTATATCTTCGTGAGCTCCTTAATAAGAACTaGGCAATTCAGAAACTTTTCAGGCTGGTACAAAAT +
Preference number: 6 (lower is better)
Translates to: LKVYLRELLNKN*AIQKLFRLVQN
Trigger: ATTTTGTACCAGCCTGAAAAGTTTCTGAATTGCCCAGTTCTTATTAAGGAGCTCACGAAGATATACTTTAAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000076272.5
ENSMUST00000121265.7
CDS CAA 72 bp GTTAGATTTCCCCCAAATAGAAAAAGGCACAATGGTTaGACCATATTCGTCCAAATTCATTTGCCTAATTTT +
Preference number: 6 (lower is better)
Translates to: VRFPPNRKRHNG*TIFVQIHLPNF
Trigger: AAAATTAGGCAAATGAATTTGGACGAATATGGTCAAACCATTGTGCCTTTTTCTATTTGGGGGAAATCTAAC
35% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000076272.5
ENSMUST00000121265.7