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Pregenerated sensors for ABCA13 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000004668

Ensembl transcript IDs: ENSMUST00000042740.13, ENSMUST00000151522.2

Found 684 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CAGCTTGGATATCCTAGGTCCTCTTGGTTCCTGCACTTCTTAGTTTaGACTCTTGTCAGTTCATGGCTGAGTCTGTCACAGACAACCTGT +
Preference number: 1 (lower is better)
Translates to: QLGYPRSSWFLHFLV*TLVSSWLSLSQTTC
Trigger: ACAGGTTGTCTGTGACAGACTCAGCCATGAACTGACAAGAGTCCAAACTAAGAAGTGCAGGAACCAAGAGGACCTAGGATATCCAAGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
3UTR CCA 90 bp TTAAAAGGAAGATGCAATGTGCAGCTTGGATATCCTAGGTCCTCTTaGTTCCTGCACTTCTTAGTTTGGACTCTTGTCAGTTCATGGCTG +
Preference number: 1 (lower is better)
Translates to: LKGRCNVQLGYPRSS*FLHFLVWTLVSSWL
Trigger: CAGCCATGAACTGACAAGAGTCCAAACTAAGAAGTGCAGGAACCAAGAGGACCTAGGATATCCAAGCTGCACATTGCATCTTCCTTTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
3UTR GCA 90 bp GTCTTACTCCAATTTGTTAAGGACTCGGTATATTTAAAAGGAAGATaGAATGTGCAGCTTGGATATCCTAGGTCCTCTTGGTTCCTGCAC +
Preference number: 1 (lower is better)
Translates to: VLLQFVKDSVYLKGR*NVQLGYPRSSWFLH
Trigger: GTGCAGGAACCAAGAGGACCTAGGATATCCAAGCTGCACATTGCATCTTCCTTTTAAATATACCGAGTCCTTAACAAATTGGAGTAAGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
3UTR TCA 90 bp TTGGTTATTAATAGGCATAGAGTAATAAAAGAAAGACTACATGACTaGTGGAGCATTTCTTCCAGCTCTTCAGCTGTCCCTGAAGATGAG +
Preference number: 1 (lower is better)
Translates to: LVINRHRVIKERLHD*WSISSSSSAVPEDE
Trigger: CTCATCTTCAGGGACAGCTGAAGAGCTGGAAGAAATGCTCCATCAGTCATGTAGTCTTTCTTTTATTACTCTATGCCTATTAATAACCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
3UTR TCA 90 bp TGGGATTCTAAGCGTGTTATAAATGACAAACATCTTCAATTTTGCTaGTGGACTGGCATAAAGCAGGAATGCATATGGCAATTTCTTTAT +
Preference number: 1 (lower is better)
Translates to: WDSKRVINDKHLQFC*WTGIKQECIWQFLY
Trigger: ATAAAGAAATTGCCATATGCATTCCTGCTTTATGCCAGTCCATCAGCAAAATTGAAGATGTTTGTCATTTATAACACGCTTAGAATCCCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
3UTR-3UTR TCA 90 bp GGGGCCATTTGCTCCCAACACTGTCCATTTAATTACAGGCAACTGTGTGTGTTTGAAAGACTACATGACTaGTGGAGCATTTCTTCCAGC +
Preference number: 2 (lower is better)
Translates to: GAICSQHCPFNYRQLCVFERLHD*WSISSS
Trigger: GCTGGAAGAAATGCTCCATCAGTCATGTAGTCTTTC...AAACACACACAGTTGCCTGTAATTAAATGGACAGTGTTGGGAGCAAATGGCCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
3UTR-3UTR TCA 90 bp TATAATCCTTCTAGAACTAAACTTTGCCTGGGGCCATTTGCTCCCAACACTGTCTTGTCAGTTCATGGCTaGGTCTGTCACAGACAACCT +
Preference number: 2 (lower is better)
Translates to: YNPSRTKLCLGPFAPNTVLSVHG*VCHRQP
Trigger: AGGTTGTCTGTGACAGACTCAGCCATGAACTGACAA...GACAGTGTTGGGAGCAAATGGCCCCAGGCAAAGTTTAGTTCTAGAAGGATTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
3UTR-3UTR CCA 90 bp TTTGAGATTCTATCCCTCAGAGATTATGCTGAGAACATGAGTTTCCACAAGGCTAACCTGTCACCTACCTaGTGTGGCAATCAGCAGAAA +
Preference number: 2 (lower is better)
Translates to: FEILSLRDYAENMSFHKANLSPT*CGNQQK
Trigger: TTTCTGCTGATTGCCACACCAGGTAGGTGACAGGTT...AGCCTTGTGGAAACTCATGTTCTCAGCATAATCTCTGAGGGATAGAATCTCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
3UTR-3UTR GCA 90 bp CACTGTCCATTTAATTACAGGCAACTGTGTGTGTTTAAACCCAGGATATTAGGCAAGGAAGATGCAATGTaGAGCTTGGATATCCTAGGT +
Preference number: 2 (lower is better)
Translates to: HCPFNYRQLCVFKPRILGKEDAM*SLDILG
Trigger: ACCTAGGATATCCAAGCTGCACATTGCATCTTCCTT...GCCTAATATCCTGGGTTTAAACACACACAGTTGCCTGTAATTAAATGGACAGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
3UTR-3UTR CCA 90 bp CACTGTCCATTTAATTACAGGCAACTGTGTGTGTTTAAACCCAGGATATTAGGCCTGCACTTCTTAGTTTaGACTCTTGTCAGTTCATGG +
Preference number: 2 (lower is better)
Translates to: HCPFNYRQLCVFKPRILGLHFLV*TLVSSW
Trigger: CCATGAACTGACAAGAGTCCAAACTAAGAAGTGCAG...GCCTAATATCCTGGGTTTAAACACACACAGTTGCCTGTAATTAAATGGACAGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
3UTR-3UTR CCA 90 bp CATAGTCTGTGGGATTCTAAGCGTGTTATAAATGACAAACATCTTCAATTTTGCTATCCTAGGTCCTCTTaGTTCCTGCACTTCTTAGTT +
Preference number: 2 (lower is better)
Translates to: HSLWDSKRVINDKHLQFCYPRSS*FLHFLV
Trigger: AACTAAGAAGTGCAGGAACCAAGAGGACCTAGGATA...GCAAAATTGAAGATGTTTGTCATTTATAACACGCTTAGAATCCCACAGACTATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
3UTR CCA 72 bp TTCCTGCACTTCTTAGTTTGGACTCTTGTCAGTTCATaGCTGAGTCTGTCACAGACAACCTGTCACCTACCT +
Preference number: 3 (lower is better)
Translates to: FLHFLVWTLVSS*LSLSQTTCHLP
Trigger: AGGTAGGTGACAGGTTGTCTGTGACAGACTCAGCCATGAACTGACAAGAGTCCAAACTAAGAAGTGCAGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
3UTR CCA 72 bp TATCCTAGGTCCTCTTGGTTCCTGCACTTCTTAGTTTaGACTCTTGTCAGTTCATGGCTGAGTCTGTCACAG +
Preference number: 3 (lower is better)
Translates to: YPRSSWFLHFLV*TLVSSWLSLSQ
Trigger: CTGTGACAGACTCAGCCATGAACTGACAAGAGTCCAAACTAAGAAGTGCAGGAACCAAGAGGACCTAGGATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
3UTR CCA 72 bp AGATGCAATGTGCAGCTTGGATATCCTAGGTCCTCTTaGTTCCTGCACTTCTTAGTTTGGACTCTTGTCAGT +
Preference number: 3 (lower is better)
Translates to: RCNVQLGYPRSS*FLHFLVWTLVS
Trigger: ACTGACAAGAGTCCAAACTAAGAAGTGCAGGAACCAAGAGGACCTAGGATATCCAAGCTGCACATTGCATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
3UTR-3UTR CAA 90 bp TATAATCCTTCTAGAACTAAACTTTGCCTGGGGCCATTTGCTCCCAACACTGTCAGTTTTGGGGGAAGTTaGCATTTAAATTGCCAGGCA +
Preference number: 3 (lower is better)
Translates to: YNPSRTKLCLGPFAPNTVSFGGS*HLNCQA
Trigger: TGCCTGGCAATTTAAATGCAAACTTCCCCCAAAACT...GACAGTGTTGGGAGCAAATGGCCCCAGGCAAAGTTTAGTTCTAGAAGGATTATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
3UTR TCA 72 bp AATAGGCATAGAGTAATAAAAGAAAGACTACATGACTaGTGGAGCATTTCTTCCAGCTCTTCAGCTGTCCCT +
Preference number: 3 (lower is better)
Translates to: NRHRVIKERLHD*WSISSSSSAVP
Trigger: AGGGACAGCTGAAGAGCTGGAAGAAATGCTCCATCAGTCATGTAGTCTTTCTTTTATTACTCTATGCCTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
3UTR GCA 72 bp CAATTTGTTAAGGACTCGGTATATTTAAAAGGAAGATaGAATGTGCAGCTTGGATATCCTAGGTCCTCTTGG +
Preference number: 3 (lower is better)
Translates to: QFVKDSVYLKGR*NVQLGYPRSSW
Trigger: CCAAGAGGACCTAGGATATCCAAGCTGCACATTGCATCTTCCTTTTAAATATACCGAGTCCTTAACAAATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
3UTR CCA 72 bp AGTTTCCACAAGGCTCTAGATGAGGCTAATGCAACATaGAATACTCAACAGTTCAAAACAACTGGCTTAAAA +
Preference number: 3 (lower is better)
Translates to: SFHKALDEANAT*NTQQFKTTGLK
Trigger: TTTTAAGCCAGTTGTTTTGAACTGTTGAGTATTCCATGTTGCATTAGCCTCATCTAGAGCCTTGTGGAAACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
3UTR TCA 72 bp AAGCGTGTTATAAATGACAAACATCTTCAATTTTGCTaGTGGACTGGCATAAAGCAGGAATGCATATGGCAA +
Preference number: 3 (lower is better)
Translates to: KRVINDKHLQFC*WTGIKQECIWQ
Trigger: TTGCCATATGCATTCCTGCTTTATGCCAGTCCATCAGCAAAATTGAAGATGTTTGTCATTTATAACACGCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR CCA 90 bp CTGAGTCTGTCACAGACAACCTGTCACCTACCTGGTGTGGCAATCAGCAGAAAAACCTGGGGGATGGTCTaGTGCAGGGGTAGCCAATCC +
Preference number: 4 (lower is better)
Translates to: LSLSQTTCHLPGVAISRKTWGMV*CRGSQS
Trigger: GGATTGGCTACCCCTGCACCAGACCATCCCCCAGGT...TTTTCTGCTGATTGCCACACCAGGTAGGTGACAGGTTGTCTGTGACAGACTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR CCA 90 bp CTGAGTCTGTCACAGACAACCTGTCACCTACCTGGTGTGGCAATCAGCAGAAAACTGAGCCTCCCCTGCTaGAGAACAGCCACGTGGTCA +
Preference number: 4 (lower is better)
Translates to: LSLSQTTCHLPGVAISRKLSLPC*RTATWS
Trigger: TGACCACGTGGCTGTTCTCCAGCAGGGGAGGCTCAG...TTTTCTGCTGATTGCCACACCAGGTAGGTGACAGGTTGTCTGTGACAGACTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR TCA 90 bp CTGAGTCTGTCACAGACAACCTGTCACCTACCTGGTGTGGCAATCAGCAGAAAACCATGGGGACAGGTCTaGCAGGGCATGCTGCAACTT +
Preference number: 4 (lower is better)
Translates to: LSLSQTTCHLPGVAISRKPWGQV*QGMLQL
Trigger: AAGTTGCAGCATGCCCTGTCAGACCTGTCCCCATGG...TTTTCTGCTGATTGCCACACCAGGTAGGTGACAGGTTGTCTGTGACAGACTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR TCA 90 bp CTGAGTCTGTCACAGACAACCTGTCACCTACCTGGTGTGGCAATCAGCAGAAAACCTGGCAGAGCCCCTTaGAGCAGGTTCTGTCTGCAT +
Preference number: 4 (lower is better)
Translates to: LSLSQTTCHLPGVAISRKPGRAP*SRFCLH
Trigger: ATGCAGACAGAACCTGCTTCAAGGGGCTCTGCCAGG...TTTTCTGCTGATTGCCACACCAGGTAGGTGACAGGTTGTCTGTGACAGACTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR CCA 90 bp ATAATCCTTCTAGAACTAAACTTTGCCTGGGGCCATTTGCTCCCAACACTGTCCAGGCAGGGCCCCTTCTaGTGGAGTGCTCAGGGGAGA +
Preference number: 4 (lower is better)
Translates to: IILLELNFAWGHLLPTLSRQGPF*WSAQGR
Trigger: TCTCCCCTGAGCACTCCACCAGAAGGGGCCCTGCCT...GGACAGTGTTGGGAGCAAATGGCCCCAGGCAAAGTTTAGTTCTAGAAGGATTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR TCA 90 bp GCTATGTATAATCCTTCTAGAACTAAACTTTGCCTGGGGCCATTTGCTCCCAACAGGGCTGCCAGACTGTaGCTGGCACCTGCAAGCAGG +
Preference number: 4 (lower is better)
Translates to: AMYNPSRTKLCLGPFAPNRAARL*LAPASR
Trigger: CCTGCTTGCAGGTGCCAGTCACAGTCTGGCAGCCCT...GTTGGGAGCAAATGGCCCCAGGCAAAGTTTAGTTCTAGAAGGATTATACATAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR TCA 90 bp CTGAGTCTGTCACAGACAACCTGTCACCTACCTGGTGTGGCAATCAGCAGAAAAAGCTGTCATTCAAGATaGGCAGGGCAGTGTGCAGGG +
Preference number: 4 (lower is better)
Translates to: LSLSQTTCHLPGVAISRKSCHSR*AGQCAG
Trigger: CCCTGCACACTGCCCTGCTCATCTTGAATGACAGCT...TTTTCTGCTGATTGCCACACCAGGTAGGTGACAGGTTGTCTGTGACAGACTCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR GCA 90 bp TTCCTGCACTTCTTAGTTTGGACTCTTGTCAGTTCATGGCTGAGTCTGTCACAGTGCTGGTCCCCCTCTTaGCATCAGGGACCAGGCTTG +
Preference number: 4 (lower is better)
Translates to: FLHFLVWTLVSSWLSLSQCWSPS*HQGPGL
Trigger: CAAGCCTGGTCCCTGATGGCAAGAGGGGGACCAGCA...CTGTGACAGACTCAGCCATGAACTGACAAGAGTCCAAACTAAGAAGTGCAGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR CCA 90 bp GCTATGTATAATCCTTCTAGAACTAAACTTTGCCTGGGGCCATTTGCTCCCAACCAGGGCCCCTTCTGGTaGAGTGCTCAGGGGAGAGAC +
Preference number: 4 (lower is better)
Translates to: AMYNPSRTKLCLGPFAPNQGPFW*SAQGRD
Trigger: GTCTCTCCCCTGAGCACTCCACCAGAAGGGGCCCTG...GTTGGGAGCAAATGGCCCCAGGCAAAGTTTAGTTCTAGAAGGATTATACATAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR TCA 90 bp TCCTCTTGGTTCCTGCACTTCTTAGTTTGGACTCTTGTCAGTTCATGGCTGAGTGAAGGTTGGTGCCGCTaGAACTGGGAGGCGTTTCCT +
Preference number: 4 (lower is better)
Translates to: SSWFLHFLVWTLVSSWLSEGWCR*NWEAFP
Trigger: AGGAAACGCCTCCCAGTTTCAGCGGCACCAACCTTC...ACTCAGCCATGAACTGACAAGAGTCCAAACTAAGAAGTGCAGGAACCAAGAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR TCA 90 bp TATAATCCTTCTAGAACTAAACTTTGCCTGGGGCCATTTGCTCCCAACACTGTCTCCCCAGCAGGGCTGTaGTCTGGTCTCTGTGGAAGG +
Preference number: 4 (lower is better)
Translates to: YNPSRTKLCLGPFAPNTVSPAGL*SGLCGR
Trigger: CCTTCCACAGAGACCAGATCACAGCCCTGCTGGGGA...GACAGTGTTGGGAGCAAATGGCCCCAGGCAAAGTTTAGTTCTAGAAGGATTATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR GCA 90 bp TATAATCCTTCTAGAACTAAACTTTGCCTGGGGCCATTTGCTCCCAACACTGTCGTAGGGTGCTGCCTGTaGCTGTGTGGTTGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: YNPSRTKLCLGPFAPNTVVGCCL*LCGWLQ
Trigger: CTGGAGCCAACCACACAGGCACAGGCAGCACCCTAC...GACAGTGTTGGGAGCAAATGGCCCCAGGCAAAGTTTAGTTCTAGAAGGATTATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR GCA 90 bp GGGGCCATTTGCTCCCAACACTGTCCATTTAATTACAGGCAACTGTGTGTGTTTGATGGTGGTTTTCCCTaGACCGTTGGTCCCCAGCAG +
Preference number: 4 (lower is better)
Translates to: GAICSQHCPFNYRQLCVFDGGFP*TVGPQQ
Trigger: CTGCTGGGGACCAACGGTGCAGGGAAAACCACCATC...AAACACACACAGTTGCCTGTAATTAAATGGACAGTGTTGGGAGCAAATGGCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR GCA 90 bp GGGGCCATTTGCTCCCAACACTGTCCATTTAATTACAGGCAACTGTGTGTGTTTGCGTCGCACCAGGTCTaGAGCAACCTCTGGGATGTA +
Preference number: 4 (lower is better)
Translates to: GAICSQHCPFNYRQLCVFASHQV*SNLWDV
Trigger: TACATCCCAGAGGTTGCTGCAGACCTGGTGCGACGC...AAACACACACAGTTGCCTGTAATTAAATGGACAGTGTTGGGAGCAAATGGCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR CCA 90 bp CTGAGTCTGTCACAGACAACCTGTCACCTACCTGGTGTGGCAATCAGCAGAAAAAATCACTGCTTCTGCTaGTCCCCCTCTTGCCATCAG +
Preference number: 4 (lower is better)
Translates to: LSLSQTTCHLPGVAISRKNHCFC*SPSCHQ
Trigger: CTGATGGCAAGAGGGGGACCAGCAGAAGCAGTGATT...TTTTCTGCTGATTGCCACACCAGGTAGGTGACAGGTTGTCTGTGACAGACTCAG
51% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR CCA 90 bp GGGGCCATTTGCTCCCAACACTGTCCATTTAATTACAGGCAACTGTGTGTGTTTCTGCCTGTGCCTGTGTaGTTGGCTCCAGGGATTCCT +
Preference number: 4 (lower is better)
Translates to: GAICSQHCPFNYRQLCVFLPVPV*LAPGIP
Trigger: AGGAATCCCTGGAGCCAACCACACAGGCACAGGCAG...AAACACACACAGTTGCCTGTAATTAAATGGACAGTGTTGGGAGCAAATGGCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR CCA 90 bp CTGAGTCTGTCACAGACAACCTGTCACCTACCTGGTGTGGCAATCAGCAGAAAACCAACCTCCAAGCCTTaGTTTTGCAGATGGCACCAG +
Preference number: 4 (lower is better)
Translates to: LSLSQTTCHLPGVAISRKPTSKP*FCRWHQ
Trigger: CTGGTGCCATCTGCAAAACCAAGGCTTGGAGGTTGG...TTTTCTGCTGATTGCCACACCAGGTAGGTGACAGGTTGTCTGTGACAGACTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR TCA 90 bp CTGAGTCTGTCACAGACAACCTGTCACCTACCTGGTGTGGCAATCAGCAGAAAAGGTAAATGGTCTCATTaGCAACAGCGCTGTGCTGCT +
Preference number: 4 (lower is better)
Translates to: LSLSQTTCHLPGVAISRKGKWSH*QQRCAA
Trigger: AGCAGCACAGCGCTGTTGTCAATGAGACCATTTACC...TTTTCTGCTGATTGCCACACCAGGTAGGTGACAGGTTGTCTGTGACAGACTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR TCA 90 bp TTTGAGATTCTATCCCTCAGAGATTATGCTGAGAACATGAGTTTCCACAAGGCTGGGCAGCCCTTCCCTTaGGAAGCCTGCTTTGCCGAG +
Preference number: 4 (lower is better)
Translates to: FEILSLRDYAENMSFHKAGQPFP*EACFAE
Trigger: CTCGGCAAAGCAGGCTTCTCAAGGGAAGGGCTGCCC...AGCCTTGTGGAAACTCATGTTCTCAGCATAATCTCTGAGGGATAGAATCTCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR TCA 90 bp ATAATCCTTCTAGAACTAAACTTTGCCTGGGGCCATTTGCTCCCAACACTGTCCAGTAGAGAGAAGACTTaGGACCCAGGCAGGCTGCAG +
Preference number: 4 (lower is better)
Translates to: IILLELNFAWGHLLPTLSSREKT*DPGRLQ
Trigger: CTGCAGCCTGCCTGGGTCTCAAGTCTTCTCTCTACT...GGACAGTGTTGGGAGCAAATGGCCCCAGGCAAAGTTTAGTTCTAGAAGGATTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR TCA 90 bp TATAATCCTTCTAGAACTAAACTTTGCCTGGGGCCATTTGCTCCCAACACTGTCCCAAAGGCTGCACCATaGACAAGCCCATGGCCAAGG +
Preference number: 4 (lower is better)
Translates to: YNPSRTKLCLGPFAPNTVPKAAP*TSPWPR
Trigger: CCTTGGCCATGGGCTTGTTCATGGTGCAGCCTTTGG...GACAGTGTTGGGAGCAAATGGCCCCAGGCAAAGTTTAGTTCTAGAAGGATTATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR GCA 90 bp GGGGCCATTTGCTCCCAACACTGTCCATTTAATTACAGGCAACTGTGTGTGTTTGGCTCCAGGGATTCCTaGCCAGTCTGTACCACAATG +
Preference number: 4 (lower is better)
Translates to: GAICSQHCPFNYRQLCVFGSRDS*PVCTTM
Trigger: CATTGTGGTACAGACTGGGCAGGAATCCCTGGAGCC...AAACACACACAGTTGCCTGTAATTAAATGGACAGTGTTGGGAGCAAATGGCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR GCA 90 bp GCTATGTATAATCCTTCTAGAACTAAACTTTGCCTGGGGCCATTTGCTCCCAACATGGCATGGGTAGGGTaGTGCCTGTGCCTGTGTGGT +
Preference number: 4 (lower is better)
Translates to: AMYNPSRTKLCLGPFAPNMAWVG*CLCLCG
Trigger: ACCACACAGGCACAGGCAGCACCCTACCCATGCCAT...GTTGGGAGCAAATGGCCCCAGGCAAAGTTTAGTTCTAGAAGGATTATACATAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR GCA 90 bp GGGGCCATTTGCTCCCAACACTGTCCATTTAATTACAGGCAACTGTGTGTGTTTCACCACACTGGCGGATaGTCTCCAGGATCCTGTCTT +
Preference number: 4 (lower is better)
Translates to: GAICSQHCPFNYRQLCVFHHTGG*SPGSCL
Trigger: AAGACAGGATCCTGGAGAGCATCCGCCAGTGTGGTG...AAACACACACAGTTGCCTGTAATTAAATGGACAGTGTTGGGAGCAAATGGCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR CCA 90 bp ATAATCCTTCTAGAACTAAACTTTGCCTGGGGCCATTTGCTCCCAACACTGTCCTGCTCAGAGCCAGAGTaGCCATGTTCTCCAGGAACC +
Preference number: 4 (lower is better)
Translates to: IILLELNFAWGHLLPTLSCSEPE*PCSPGT
Trigger: GGTTCCTGGAGAACATGGCCACTCTGGCTCTGAGCA...GGACAGTGTTGGGAGCAAATGGCCCCAGGCAAAGTTTAGTTCTAGAAGGATTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR CCA 90 bp GGGGCCATTTGCTCCCAACACTGTCCATTTAATTACAGGCAACTGTGTGTGTTTAAATGTCATGCCCCCTaGCTCTGGAGCGCGGTACAT +
Preference number: 4 (lower is better)
Translates to: GAICSQHCPFNYRQLCVFKCHAP*LWSAVH
Trigger: ATGTACCGCGCTCCAGAGCCAGGGGGCATGACATTT...AAACACACACAGTTGCCTGTAATTAAATGGACAGTGTTGGGAGCAAATGGCCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR CCA 90 bp TTCCTGCACTTCTTAGTTTGGACTCTTGTCAGTTCATGGCTGAGTCTGTCACAGAGAGCCGGGGCATGGTaGTCATCAACATGGTGCACA +
Preference number: 4 (lower is better)
Translates to: FLHFLVWTLVSSWLSLSQRAGAW*SSTWCT
Trigger: TGTGCACCATGTTGATGACCACCATGCCCCGGCTCT...CTGTGACAGACTCAGCCATGAACTGACAAGAGTCCAAACTAAGAAGTGCAGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR TCA 90 bp CTGAGTCTGTCACAGACAACCTGTCACCTACCTGGTGTGGCAATCAGCAGAAAATCCTCAGCCAGATCCTaGATCTCGTTTAAAAAGGCC +
Preference number: 4 (lower is better)
Translates to: LSLSQTTCHLPGVAISRKSSARS*ISFKKA
Trigger: GGCCTTTTTAAACGAGATTCAGGATCTGGCTGAGGA...TTTTCTGCTGATTGCCACACCAGGTAGGTGACAGGTTGTCTGTGACAGACTCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR TCA 90 bp ATAATCCTTCTAGAACTAAACTTTGCCTGGGGCCATTTGCTCCCAACACTGTCCCATGAAAGGGTGCAGTaGATGGCCGTGAATTCGCTG +
Preference number: 4 (lower is better)
Translates to: IILLELNFAWGHLLPTLSHERVQ*MAVNSL
Trigger: CAGCGAATTCACGGCCATTCACTGCACCCTTTCATG...GGACAGTGTTGGGAGCAAATGGCCCCAGGCAAAGTTTAGTTCTAGAAGGATTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR TCA 90 bp TCCTCTTGGTTCCTGCACTTCTTAGTTTGGACTCTTGTCAGTTCATGGCTGAGTCCTACTTACATCAGTTaGATTCCCACTGGCCACGGC +
Preference number: 4 (lower is better)
Translates to: SSWFLHFLVWTLVSSWLSPTYIS*IPTGHG
Trigger: GCCGTGGCCAGTGGGAATTCAACTGATGTAAGTAGG...ACTCAGCCATGAACTGACAAGAGTCCAAACTAAGAAGTGCAGGAACCAAGAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR TCA 90 bp CTGAGTCTGTCACAGACAACCTGTCACCTACCTGGTGTGGCAATCAGCAGAAAACATCCTTTGCTGATGTaGCATTCTGATGAGGGGTTG +
Preference number: 4 (lower is better)
Translates to: LSLSQTTCHLPGVAISRKHPLLM*HSDEGL
Trigger: CAACCCCTCATCAGAATGTCACATCAGCAAAGGATG...TTTTCTGCTGATTGCCACACCAGGTAGGTGACAGGTTGTCTGTGACAGACTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR TCA 90 bp CTGAGTCTGTCACAGACAACCTGTCACCTACCTGGTGTGGCAATCAGCAGAAAAAGGCATCACTGTGCATaGAGATGCCACTCATCTTCA +
Preference number: 4 (lower is better)
Translates to: LSLSQTTCHLPGVAISRKRHHCA*RCHSSS
Trigger: TGAAGATGAGTGGCATCTTCATGCACAGTGATGCCT...TTTTCTGCTGATTGCCACACCAGGTAGGTGACAGGTTGTCTGTGACAGACTCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR GCA 90 bp GCTATGTATAATCCTTCTAGAACTAAACTTTGCCTGGGGCCATTTGCTCCCAACAGGGAGAGGACTGGATaGCGGAGTCTGCAAATCCAG +
Preference number: 4 (lower is better)
Translates to: AMYNPSRTKLCLGPFAPNRERTG*RSLQIQ
Trigger: CTGGATTTGCAGACTCCGGCATCCAGTCCTCTCCCT...GTTGGGAGCAAATGGCCCCAGGCAAAGTTTAGTTCTAGAAGGATTATACATAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR GCA 90 bp CACTGTCCATTTAATTACAGGCAACTGTGTGTGTTTAAACCCAGGATATTAGGCCTGCTCCCTAAGGGCTaGCAGACTGTGACTGGCACC +
Preference number: 4 (lower is better)
Translates to: HCPFNYRQLCVFKPRILGLLPKG*QTVTGT
Trigger: GGTGCCAGTCACAGTCTGGCAGCCCTTAGGGAGCAG...GCCTAATATCCTGGGTTTAAACACACACAGTTGCCTGTAATTAAATGGACAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR GCA 90 bp GCTATGTATAATCCTTCTAGAACTAAACTTTGCCTGGGGCCATTTGCTCCCAACAAGGGTCCACCCCACTaGTTGGCTCATCCAGAACCA +
Preference number: 4 (lower is better)
Translates to: AMYNPSRTKLCLGPFAPNKGPPH*LAHPEP
Trigger: TGGTTCTGGATGAGCCAAGCAGTGGGGTGGACCCTT...GTTGGGAGCAAATGGCCCCAGGCAAAGTTTAGTTCTAGAAGGATTATACATAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR GCA 90 bp TCCTCTTGGTTCCTGCACTTCTTAGTTTGGACTCTTGTCAGTTCATGGCTGAGTGTGATGGCCAAAGGCTaGACCATGAACAAGCCCATG +
Preference number: 4 (lower is better)
Translates to: SSWFLHFLVWTLVSSWLSVMAKG*TMNKPM
Trigger: CATGGGCTTGTTCATGGTGCAGCCTTTGGCCATCAC...ACTCAGCCATGAACTGACAAGAGTCCAAACTAAGAAGTGCAGGAACCAAGAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR GCA 90 bp CTGAGTCTGTCACAGACAACCTGTCACCTACCTGGTGTGGCAATCAGCAGAAAATCCAAGCCTTGGTTTTaGAGATGGCACCAGCAAGTA +
Preference number: 4 (lower is better)
Translates to: LSLSQTTCHLPGVAISRKSKPWF*RWHQQV
Trigger: TACTTGCTGGTGCCATCTGCAAAACCAAGGCTTGGA...TTTTCTGCTGATTGCCACACCAGGTAGGTGACAGGTTGTCTGTGACAGACTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR GCA 90 bp CTGAGTCTGTCACAGACAACCTGTCACCTACCTGGTGTGGCAATCAGCAGAAAACAAGCAGTCAGAAACTaGACTAGGCTGACTTCCTTC +
Preference number: 4 (lower is better)
Translates to: LSLSQTTCHLPGVAISRKQAVRN*TRLTSF
Trigger: GAAGGAAGTCAGCCTAGTGCAGTTTCTGACTGCTTG...TTTTCTGCTGATTGCCACACCAGGTAGGTGACAGGTTGTCTGTGACAGACTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR CCA 90 bp CTGAGTCTGTCACAGACAACCTGTCACCTACCTGGTGTGGCAATCAGCAGAAAAGAGAGACGCAACAGGTaGCTAACACTCCATGAATGT +
Preference number: 4 (lower is better)
Translates to: LSLSQTTCHLPGVAISRKERRNR*LTLHEC
Trigger: ACATTCATGGAGTGTTAGCCACCTGTTGCGTCTCTC...TTTTCTGCTGATTGCCACACCAGGTAGGTGACAGGTTGTCTGTGACAGACTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR CCA 90 bp TTTGAGATTCTATCCCTCAGAGATTATGCTGAGAACATGAGTTTCCACAAGGCTCTGTGCCTGTGTGGTTaGCTCCAGGGATTCCTGCCC +
Preference number: 4 (lower is better)
Translates to: FEILSLRDYAENMSFHKALCLCG*LQGFLP
Trigger: GGGCAGGAATCCCTGGAGCCAACCACACAGGCACAG...AGCCTTGTGGAAACTCATGTTCTCAGCATAATCTCTGAGGGATAGAATCTCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR CCA 90 bp TTCCTGCACTTCTTAGTTTGGACTCTTGTCAGTTCATGGCTGAGTCTGTCACAGTCATGTACCCCAGGCTaGTACACAGGGCTGCTGTAT +
Preference number: 4 (lower is better)
Translates to: FLHFLVWTLVSSWLSLSQSCTPG*YTGLLY
Trigger: ATACAGCAGCCCTGTGTACCAGCCTGGGGTACATGA...CTGTGACAGACTCAGCCATGAACTGACAAGAGTCCAAACTAAGAAGTGCAGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR CCA 90 bp TATAATCCTTCTAGAACTAAACTTTGCCTGGGGCCATTTGCTCCCAACACTGTCGTCCACCCCACTGCTTaGCTCATCCAGAACCACTGT +
Preference number: 4 (lower is better)
Translates to: YNPSRTKLCLGPFAPNTVVHPTA*LIQNHC
Trigger: ACAGTGGTTCTGGATGAGCCAAGCAGTGGGGTGGAC...GACAGTGTTGGGAGCAAATGGCCCCAGGCAAAGTTTAGTTCTAGAAGGATTATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR CCA 90 bp TCCTCTTGGTTCCTGCACTTCTTAGTTTGGACTCTTGTCAGTTCATGGCTGAGTCTGCATCCTTGGGGATaGTATAGGTCAGCTCACCTC +
Preference number: 4 (lower is better)
Translates to: SSWFLHFLVWTLVSSWLSLHPWG*YRSAHL
Trigger: GAGGTGAGCTGACCTATACCATCCCCAAGGATGCAG...ACTCAGCCATGAACTGACAAGAGTCCAAACTAAGAAGTGCAGGAACCAAGAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR CCA 90 bp CTGAGTCTGTCACAGACAACCTGTCACCTACCTGGTGTGGCAATCAGCAGAAAAACACCTCTTCCAAGGTaGTGTCTGAGATCCCATATC +
Preference number: 4 (lower is better)
Translates to: LSLSQTTCHLPGVAISRKTPLPR*CLRSHI
Trigger: GATATGGGATCTCAGACACCACCTTGGAAGAGGTGT...TTTTCTGCTGATTGCCACACCAGGTAGGTGACAGGTTGTCTGTGACAGACTCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR CCA 90 bp TTCCTGCACTTCTTAGTTTGGACTCTTGTCAGTTCATGGCTGAGTCTGTCACAGAGGGGAGAGACATTGTaGGGAGAAAGGGGTCCTACA +
Preference number: 4 (lower is better)
Translates to: FLHFLVWTLVSSWLSLSQRGETL*GERGPT
Trigger: TGTAGGACCCCTTTCTCCCCACAATGTCTCTCCCCT...CTGTGACAGACTCAGCCATGAACTGACAAGAGTCCAAACTAAGAAGTGCAGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR CCA 90 bp ATAATCCTTCTAGAACTAAACTTTGCCTGGGGCCATTTGCTCCCAACACTGTCCGTTAGGTCTGGGCCATaGTTCCCACTGCTGAAGAAG +
Preference number: 4 (lower is better)
Translates to: IILLELNFAWGHLLPTLSVRSGP*FPLLKK
Trigger: CTTCTTCAGCAGTGGGAACCATGGCCCAGACCTAAC...GGACAGTGTTGGGAGCAAATGGCCCCAGGCAAAGTTTAGTTCTAGAAGGATTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR CCA 90 bp GCTATGTATAATCCTTCTAGAACTAAACTTTGCCTGGGGCCATTTGCTCCCAACTCCTGCAGGACAGAGTaGTCCCTTGGCCATCTCAGA +
Preference number: 4 (lower is better)
Translates to: AMYNPSRTKLCLGPFAPNSCRTE*SLGHLR
Trigger: TCTGAGATGGCCAAGGGACCACTCTGTCCTGCAGGA...GTTGGGAGCAAATGGCCCCAGGCAAAGTTTAGTTCTAGAAGGATTATACATAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR TCA 90 bp TCCTCTTGGTTCCTGCACTTCTTAGTTTGGACTCTTGTCAGTTCATGGCTGAGTCAACTGGGAGATCAGTaGGGTGCTCTTGATCTAGCA +
Preference number: 4 (lower is better)
Translates to: SSWFLHFLVWTLVSSWLSQLGDQ*GALDLA
Trigger: TGCTAGATCAAGAGCACCTCACTGATCTCCCAGTTG...ACTCAGCCATGAACTGACAAGAGTCCAAACTAAGAAGTGCAGGAACCAAGAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR TCA 90 bp ATAATCCTTCTAGAACTAAACTTTGCCTGGGGCCATTTGCTCCCAACACTGTCCCCTCCCATCCTTTGCTaGTGTGACATTCTGATGAGG +
Preference number: 4 (lower is better)
Translates to: IILLELNFAWGHLLPTLSPPILC*CDILMR
Trigger: CCTCATCAGAATGTCACATCAGCAAAGGATGGGAGG...GGACAGTGTTGGGAGCAAATGGCCCCAGGCAAAGTTTAGTTCTAGAAGGATTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR TCA 90 bp CTGAGTCTGTCACAGACAACCTGTCACCTACCTGGTGTGGCAATCAGCAGAAAACATCCTGCAACTGGTTaGACATTTGACCATTTCCAC +
Preference number: 4 (lower is better)
Translates to: LSLSQTTCHLPGVAISRKHPATG*TFDHFH
Trigger: GTGGAAATGGTCAAATGTTCAACCAGTTGCAGGATG...TTTTCTGCTGATTGCCACACCAGGTAGGTGACAGGTTGTCTGTGACAGACTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR TCA 90 bp ATAATCCTTCTAGAACTAAACTTTGCCTGGGGCCATTTGCTCCCAACACTGTCCTGGACAGCCACCTTGTaGTCTTCATACTCCTTGGTC +
Preference number: 4 (lower is better)
Translates to: IILLELNFAWGHLLPTLSWTATL*SSYSLV
Trigger: GACCAAGGAGTATGAAGATCACAAGGTGGCTGTCCA...GGACAGTGTTGGGAGCAAATGGCCCCAGGCAAAGTTTAGTTCTAGAAGGATTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR TCA 90 bp TCCTCTTGGTTCCTGCACTTCTTAGTTTGGACTCTTGTCAGTTCATGGCTGAGTGACCTTCTCGGTACTTaGGTAGAATGTCCCAGAGAC +
Preference number: 4 (lower is better)
Translates to: SSWFLHFLVWTLVSSWLSDLLGT*VECPRD
Trigger: GTCTCTGGGACATTCTACTCAAGTACCGAGAAGGTC...ACTCAGCCATGAACTGACAAGAGTCCAAACTAAGAAGTGCAGGAACCAAGAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR TCA 90 bp TTTGAGATTCTATCCCTCAGAGATTATGCTGAGAACATGAGTTTCCACAAGGCTGAGGAGCATAGCATCTaGGCCTCCCCTGCTGGAGAA +
Preference number: 4 (lower is better)
Translates to: FEILSLRDYAENMSFHKAEEHSI*ASPAGE
Trigger: TTCTCCAGCAGGGGAGGCTCAGATGCTATGCTCCTC...AGCCTTGTGGAAACTCATGTTCTCAGCATAATCTCTGAGGGATAGAATCTCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR GCA 90 bp TTCCTGCACTTCTTAGTTTGGACTCTTGTCAGTTCATGGCTGAGTCTGTCACAGGTGTCACAGCACCCATaGTATCTTCCAAGTGAGCAC +
Preference number: 4 (lower is better)
Translates to: FLHFLVWTLVSSWLSLSQVSQHP*YLPSEH
Trigger: GTGCTCACTTGGAAGATAGCATGGGTGCTGTGACAC...CTGTGACAGACTCAGCCATGAACTGACAAGAGTCCAAACTAAGAAGTGCAGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR GCA 90 bp TTTGAGATTCTATCCCTCAGAGATTATGCTGAGAACATGAGTTTCCACAAGGCTATGAGCAGGGCAGTGTaGAGGGCTTCCACCACCTTC +
Preference number: 4 (lower is better)
Translates to: FEILSLRDYAENMSFHKAMSRAV*RASTTF
Trigger: GAAGGTGGTGGAAGCCCTGCACACTGCCCTGCTCAT...AGCCTTGTGGAAACTCATGTTCTCAGCATAATCTCTGAGGGATAGAATCTCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR GCA 90 bp ATAATCCTTCTAGAACTAAACTTTGCCTGGGGCCATTTGCTCCCAACACTGTCCAATGTCTTCAGCTGGTaGAGGGAGGTTTCCATGGTG +
Preference number: 4 (lower is better)
Translates to: IILLELNFAWGHLLPTLSNVFSW*REVSMV
Trigger: CACCATGGAAACCTCCCTGCACCAGCTGAAGACATT...GGACAGTGTTGGGAGCAAATGGCCCCAGGCAAAGTTTAGTTCTAGAAGGATTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR CCA 90 bp CTGAGTCTGTCACAGACAACCTGTCACCTACCTGGTGTGGCAATCAGCAGAAAATTGAAGAATAGGGTATaGCATAGCACTCCCCAGACA +
Preference number: 4 (lower is better)
Translates to: LSLSQTTCHLPGVAISRKLKNRV*HSTPQT
Trigger: TGTCTGGGGAGTGCTATGCCATACCCTATTCTTCAA...TTTTCTGCTGATTGCCACACCAGGTAGGTGACAGGTTGTCTGTGACAGACTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR CCA 90 bp GCTATGTATAATCCTTCTAGAACTAAACTTTGCCTGGGGCCATTTGCTCCCAACTATCCACCACATCCTTaGGAAGCAGACGGGAGAGAC +
Preference number: 4 (lower is better)
Translates to: AMYNPSRTKLCLGPFAPNYPPHP*EADGRD
Trigger: GTCTCTCCCGTCTGCTTCCCAAGGATGTGGTGGATA...GTTGGGAGCAAATGGCCCCAGGCAAAGTTTAGTTCTAGAAGGATTATACATAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR CCA 90 bp CTGAGTCTGTCACAGACAACCTGTCACCTACCTGGTGTGGCAATCAGCAGAAAACACAGGCCAATCTCCTaGTTATTTCCACTGCATACT +
Preference number: 4 (lower is better)
Translates to: LSLSQTTCHLPGVAISRKHRPIS*LFPLHT
Trigger: AGTATGCAGTGGAAATAACCAGGAGATTGGCCTGTG...TTTTCTGCTGATTGCCACACCAGGTAGGTGACAGGTTGTCTGTGACAGACTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR CCA 90 bp ATAATCCTTCTAGAACTAAACTTTGCCTGGGGCCATTTGCTCCCAACACTGTCCGCCTTCAGGAATCTCTaGAGGTATGGCATTGGCTCT +
Preference number: 4 (lower is better)
Translates to: IILLELNFAWGHLLPTLSAFRNL*RYGIGS
Trigger: AGAGCCAATGCCATACCTCCAGAGATTCCTGAAGGC...GGACAGTGTTGGGAGCAAATGGCCCCAGGCAAAGTTTAGTTCTAGAAGGATTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR CCA 90 bp TTCCTGCACTTCTTAGTTTGGACTCTTGTCAGTTCATGGCTGAGTCTGTCACAGAACCTGTTGGAAGTCTaGCATGTCCAGCAAGGCAGT +
Preference number: 4 (lower is better)
Translates to: FLHFLVWTLVSSWLSLSQNLLEV*HVQQGS
Trigger: ACTGCCTTGCTGGACATGCCAGACTTCCAACAGGTT...CTGTGACAGACTCAGCCATGAACTGACAAGAGTCCAAACTAAGAAGTGCAGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR CCA 90 bp CACTGTCCATTTAATTACAGGCAACTGTGTGTGTTTAAACCCAGGATATTAGGCGCTTCCGGACCATGCTaGCCACAGCTACCATCCAAG +
Preference number: 4 (lower is better)
Translates to: HCPFNYRQLCVFKPRILGASGPC*PQLPSK
Trigger: CTTGGATGGTAGCTGTGGCCAGCATGGTCCGGAAGC...GCCTAATATCCTGGGTTTAAACACACACAGTTGCCTGTAATTAAATGGACAGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR CCA 90 bp ATAATCCTTCTAGAACTAAACTTTGCCTGGGGCCATTTGCTCCCAACACTGTCCTACATGTTACCCCACTaGATCCCTTCCTCCTGTCCT +
Preference number: 4 (lower is better)
Translates to: IILLELNFAWGHLLPTLSYMLPH*IPSSCP
Trigger: AGGACAGGAGGAAGGGATCCAGTGGGGTAACATGTA...GGACAGTGTTGGGAGCAAATGGCCCCAGGCAAAGTTTAGTTCTAGAAGGATTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR CCA 90 bp GCTATGTATAATCCTTCTAGAACTAAACTTTGCCTGGGGCCATTTGCTCCCAACAGCAGGGCTGTGATCTaGTCTCTGTGGAAGGTGAGA +
Preference number: 4 (lower is better)
Translates to: AMYNPSRTKLCLGPFAPNSRAVI*SLWKVR
Trigger: TCTCACCTTCCACAGAGACCAGATCACAGCCCTGCT...GTTGGGAGCAAATGGCCCCAGGCAAAGTTTAGTTCTAGAAGGATTATACATAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR CCA 90 bp CTGAGTCTGTCACAGACAACCTGTCACCTACCTGGTGTGGCAATCAGCAGAAAATCGATGCTGATAAGATaGAGAATCCCAGGACAATGC +
Preference number: 4 (lower is better)
Translates to: LSLSQTTCHLPGVAISRKSMLIR*RIPGQC
Trigger: GCATTGTCCTGGGATTCTCCATCTTATCAGCATCGA...TTTTCTGCTGATTGCCACACCAGGTAGGTGACAGGTTGTCTGTGACAGACTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR CCA 90 bp TGGACTGGCATAAAGCAGGAATGCATATGGCAATTTCTTTATATCACACCATACCTAGCAGGAGGGCTGTaGCCGCCAAGTTCTCCCGAA +
Preference number: 4 (lower is better)
Translates to: WTGIKQECIWQFLYITPYLAGGL*PPSSPE
Trigger: TTCGGGAGAACTTGGCGGCCACAGCCCTCCTGCTAG...GTATGGTGTGATATAAAGAAATTGCCATATGCATTCCTGCTTTATGCCAGTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR CCA 90 bp GCTATGTATAATCCTTCTAGAACTAAACTTTGCCTGGGGCCATTTGCTCCCAACAAAGCACTCGCCTCGTaGTATGCCCAGACTAATGCC +
Preference number: 4 (lower is better)
Translates to: AMYNPSRTKLCLGPFAPNKALAS*YAQTNA
Trigger: GGCATTAGTCTGGGCATACCACGAGGCGAGTGCTTT...GTTGGGAGCAAATGGCCCCAGGCAAAGTTTAGTTCTAGAAGGATTATACATAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR CCA 90 bp ATAATCCTTCTAGAACTAAACTTTGCCTGGGGCCATTTGCTCCCAACACTGTCCTGCCCCCACTGTAAGTaGCTACAGGTTTGTCCACAT +
Preference number: 4 (lower is better)
Translates to: IILLELNFAWGHLLPTLSCPHCK*LQVCPH
Trigger: ATGTGGACAAACCTGTAGCCACTTACAGTGGGGGCA...GGACAGTGTTGGGAGCAAATGGCCCCAGGCAAAGTTTAGTTCTAGAAGGATTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR TCA 90 bp TTCCTGCACTTCTTAGTTTGGACTCTTGTCAGTTCATGGCTGAGTCTGTCACAGATCAGCCCACTGTTCTaGAGACTGCCATTCATGTTC +
Preference number: 4 (lower is better)
Translates to: FLHFLVWTLVSSWLSLSQISPLF*RLPFMF
Trigger: GAACATGAATGGCAGTCTTCAGAACAGTGGGCTGAT...CTGTGACAGACTCAGCCATGAACTGACAAGAGTCCAAACTAAGAAGTGCAGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR TCA 90 bp TCCTCTTGGTTCCTGCACTTCTTAGTTTGGACTCTTGTCAGTTCATGGCTGAGTCATGTGAAAGAAGGATaGAGGCATGTGCCTCTGGAT +
Preference number: 4 (lower is better)
Translates to: SSWFLHFLVWTLVSSWLSHVKEG*RHVPLD
Trigger: ATCCAGAGGCACATGCCTTCATCCTTCTTTCACATG...ACTCAGCCATGAACTGACAAGAGTCCAAACTAAGAAGTGCAGGAACCAAGAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR TCA 90 bp ATAATCCTTCTAGAACTAAACTTTGCCTGGGGCCATTTGCTCCCAACACTGTCCGAAACAGAGTGCGTGTaGAATGTGTCCACTGAGTGT +
Preference number: 4 (lower is better)
Translates to: IILLELNFAWGHLLPTLSETECV*NVSTEC
Trigger: ACACTCAGTGGACACATTTCACACGCACTCTGTTTC...GGACAGTGTTGGGAGCAAATGGCCCCAGGCAAAGTTTAGTTCTAGAAGGATTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR TCA 90 bp TCCTCTTGGTTCCTGCACTTCTTAGTTTGGACTCTTGTCAGTTCATGGCTGAGTGAAAGAGGCGAAAGCTaGACTTCTGGTTTGTCCCTT +
Preference number: 4 (lower is better)
Translates to: SSWFLHFLVWTLVSSWLSERGES*TSGLSL
Trigger: AAGGGACAAACCAGAAGTTCAGCTTTCGCCTCTTTC...ACTCAGCCATGAACTGACAAGAGTCCAAACTAAGAAGTGCAGGAACCAAGAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR TCA 90 bp GCTATGTATAATCCTTCTAGAACTAAACTTTGCCTGGGGCCATTTGCTCCCAACGCTCATCATGACAGCTaGCACCCCAAAATCCAGCAA +
Preference number: 4 (lower is better)
Translates to: AMYNPSRTKLCLGPFAPNAHHDS*HPKIQQ
Trigger: TTGCTGGATTTTGGGGTGTCAGCTGTCATGATGAGC...GTTGGGAGCAAATGGCCCCAGGCAAAGTTTAGTTCTAGAAGGATTATACATAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR TCA 90 bp GCTATGTATAATCCTTCTAGAACTAAACTTTGCCTGGGGCCATTTGCTCCCAACCAGGGACCAAGTTGCTaGAGTACCATCCACCCAAAA +
Preference number: 4 (lower is better)
Translates to: AMYNPSRTKLCLGPFAPNQGPSC*STIHPK
Trigger: TTTTGGGTGGATGGTACTTCAGCAACTTGGTCCCTG...GTTGGGAGCAAATGGCCCCAGGCAAAGTTTAGTTCTAGAAGGATTATACATAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR TCA 90 bp ATAATCCTTCTAGAACTAAACTTTGCCTGGGGCCATTTGCTCCCAACACTGTCCCCATCAACATGGATATaGTGGTGGTTTTCCCTGCAC +
Preference number: 4 (lower is better)
Translates to: IILLELNFAWGHLLPTLSPSTWI*WWFSLH
Trigger: GTGCAGGGAAAACCACCATCATATCCATGTTGATGG...GGACAGTGTTGGGAGCAAATGGCCCCAGGCAAAGTTTAGTTCTAGAAGGATTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR TCA 90 bp TCCTCTTGGTTCCTGCACTTCTTAGTTTGGACTCTTGTCAGTTCATGGCTGAGTGTCCCTATGCCAGCTTaGAGAATTCATCCTGAAAGC +
Preference number: 4 (lower is better)
Translates to: SSWFLHFLVWTLVSSWLSVPMPA*RIHPES
Trigger: GCTTTCAGGATGAATTCTTCAAGCTGGCATAGGGAC...ACTCAGCCATGAACTGACAAGAGTCCAAACTAAGAAGTGCAGGAACCAAGAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR GCA 90 bp TCCTCTTGGTTCCTGCACTTCTTAGTTTGGACTCTTGTCAGTTCATGGCTGAGTTGCACCCTTCCAGGCTaGTACTTGTGTTCTTTGATG +
Preference number: 4 (lower is better)
Translates to: SSWFLHFLVWTLVSSWLSCTLPG*YLCSLM
Trigger: CATCAAAGAACACAAGTAGCAGCCTGGAAGGGTGCA...ACTCAGCCATGAACTGACAAGAGTCCAAACTAAGAAGTGCAGGAACCAAGAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR GCA 90 bp ATAATCCTTCTAGAACTAAACTTTGCCTGGGGCCATTTGCTCCCAACACTGTCCTCAGGAAATCCTCTGTaGTTCCTTCAGCTTCCGCAT +
Preference number: 4 (lower is better)
Translates to: IILLELNFAWGHLLPTLSSGNPL*FLQLPH
Trigger: ATGCGGAAGCTGAAGGAAGCACAGAGGATTTCCTGA...GGACAGTGTTGGGAGCAAATGGCCCCAGGCAAAGTTTAGTTCTAGAAGGATTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR GCA 90 bp TATAATCCTTCTAGAACTAAACTTTGCCTGGGGCCATTTGCTCCCAACACTGTCAAGTGGATGGTTGGATaGAGTCCCATCATCCGCATG +
Preference number: 4 (lower is better)
Translates to: YNPSRTKLCLGPFAPNTVKWMVG*SPIIRM
Trigger: CATGCGGATGATGGGACTGCATCCAACCATCCACTT...GACAGTGTTGGGAGCAAATGGCCCCAGGCAAAGTTTAGTTCTAGAAGGATTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR GCA 90 bp TTCCTGCACTTCTTAGTTTGGACTCTTGTCAGTTCATGGCTGAGTCTGTCACAGGCTGGTACACAGGGCTaGTGTATTAGCTTGGTTGAA +
Preference number: 4 (lower is better)
Translates to: FLHFLVWTLVSSWLSLSQAGTQG*CISLVE
Trigger: TTCAACCAAGCTAATACAGCAGCCCTGTGTACCAGC...CTGTGACAGACTCAGCCATGAACTGACAAGAGTCCAAACTAAGAAGTGCAGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR GCA 90 bp GCTATGTATAATCCTTCTAGAACTAAACTTTGCCTGGGGCCATTTGCTCCCAACTCTCCTGGGCCATTTTaGTGTGAGAGCCCTTTGTTG +
Preference number: 4 (lower is better)
Translates to: AMYNPSRTKLCLGPFAPNSPGPF*CESPLL
Trigger: CAACAAAGGGCTCTCACAGCAAAATGGCCCAGGAGA...GTTGGGAGCAAATGGCCCCAGGCAAAGTTTAGTTCTAGAAGGATTATACATAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR GCA 90 bp CACTGTCCATTTAATTACAGGCAACTGTGTGTGTTTAAACCCAGGATATTAGGCCCCCTTCTGGTGGAGTaGTCAGGGGAGAGACATTGT +
Preference number: 4 (lower is better)
Translates to: HCPFNYRQLCVFKPRILGPLLVE*SGERHC
Trigger: ACAATGTCTCTCCCCTGAGCACTCCACCAGAAGGGG...GCCTAATATCCTGGGTTTAAACACACACAGTTGCCTGTAATTAAATGGACAGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR GCA 90 bp GGGGCCATTTGCTCCCAACACTGTCCATTTAATTACAGGCAACTGTGTGTGTTTACAAATCTGAGGTGGTaGTTTTCCAGGCTCGAAGTG +
Preference number: 4 (lower is better)
Translates to: GAICSQHCPFNYRQLCVFTNLRW*FSRLEV
Trigger: CACTTCGAGCCTGGAAAAGCACCACCTCAGATTTGT...AAACACACACAGTTGCCTGTAATTAAATGGACAGTGTTGGGAGCAAATGGCCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR GCA 90 bp TCCTCTTGGTTCCTGCACTTCTTAGTTTGGACTCTTGTCAGTTCATGGCTGAGTAGTAGCCAATCAGAATaGCTGCTTTGCCAGCAGAAG +
Preference number: 4 (lower is better)
Translates to: SSWFLHFLVWTLVSSWLSSSQSE*LLCQQK
Trigger: CTTCTGCTGGCAAAGCAGGCATTCTGATTGGCTACT...ACTCAGCCATGAACTGACAAGAGTCCAAACTAAGAAGTGCAGGAACCAAGAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR CCA 90 bp TATAATCCTTCTAGAACTAAACTTTGCCTGGGGCCATTTGCTCCCAACACTGTCACCTCAGGGTGGAGATaGTCACGTTCAGAACATGTC +
Preference number: 4 (lower is better)
Translates to: YNPSRTKLCLGPFAPNTVTSGWR*SRSEHV
Trigger: GACATGTTCTGAACGTGACCATCTCCACCCTGAGGT...GACAGTGTTGGGAGCAAATGGCCCCAGGCAAAGTTTAGTTCTAGAAGGATTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR CCA 90 bp GGGGCCATTTGCTCCCAACACTGTCCATTTAATTACAGGCAACTGTGTGTGTTTCATCAGTTTTCACTGTaGTCTCCCATGGATGGGTGT +
Preference number: 4 (lower is better)
Translates to: GAICSQHCPFNYRQLCVFHQFSL*SPMDGC
Trigger: ACACCCATCCATGGGAGACCACAGTGAAAACTGATG...AAACACACACAGTTGCCTGTAATTAAATGGACAGTGTTGGGAGCAAATGGCCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR CCA 90 bp TATAATCCTTCTAGAACTAAACTTTGCCTGGGGCCATTTGCTCCCAACACTGTCGTTTCCTCAGAGATGTaGAAGAAGGAGCGAAGGTCC +
Preference number: 4 (lower is better)
Translates to: YNPSRTKLCLGPFAPNTVVSSEM*KKERRS
Trigger: GGACCTTCGCTCCTTCTTCCACATCTCTGAGGAAAC...GACAGTGTTGGGAGCAAATGGCCCCAGGCAAAGTTTAGTTCTAGAAGGATTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR CCA 90 bp ATAATCCTTCTAGAACTAAACTTTGCCTGGGGCCATTTGCTCCCAACACTGTCCCTCAGGTTCAGGTTCTaGCCCATCATCACAAGTAGA +
Preference number: 4 (lower is better)
Translates to: IILLELNFAWGHLLPTLSLRFRF*PIITSR
Trigger: TCTACTTGTGATGATGGGCCAGAACCTGAACCTGAG...GGACAGTGTTGGGAGCAAATGGCCCCAGGCAAAGTTTAGTTCTAGAAGGATTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR CCA 90 bp TCCTCTTGGTTCCTGCACTTCTTAGTTTGGACTCTTGTCAGTTCATGGCTGAGTCTGAGGAAAGACTCCTaGTCCTTACAGAGAAGCTTC +
Preference number: 4 (lower is better)
Translates to: SSWFLHFLVWTLVSSWLSLRKDS*SLQRSF
Trigger: GAAGCTTCTCTGTAAGGACCAGGAGTCTTTCCTCAG...ACTCAGCCATGAACTGACAAGAGTCCAAACTAAGAAGTGCAGGAACCAAGAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR CCA 90 bp TCCTCTTGGTTCCTGCACTTCTTAGTTTGGACTCTTGTCAGTTCATGGCTGAGTCACAGGAAGAGAGATTaGCCAACATACCACCCAAGA +
Preference number: 4 (lower is better)
Translates to: SSWFLHFLVWTLVSSWLSHRKRD*PTYHPR
Trigger: TCTTGGGTGGTATGTTGGCCAATCTCTCTTCCTGTG...ACTCAGCCATGAACTGACAAGAGTCCAAACTAAGAAGTGCAGGAACCAAGAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR CCA 90 bp TGGACTGGCATAAAGCAGGAATGCATATGGCAATTTCTTTATATCACACCATACGTCACTGGTATGGCATaGGTAGGGTGCTGCCTGTGC +
Preference number: 4 (lower is better)
Translates to: WTGIKQECIWQFLYITPYVTGMA*VGCCLC
Trigger: GCACAGGCAGCACCCTACCCATGCCATACCAGTGAC...GTATGGTGTGATATAAAGAAATTGCCATATGCATTCCTGCTTTATGCCAGTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR CCA 90 bp TATAATCCTTCTAGAACTAAACTTTGCCTGGGGCCATTTGCTCCCAACACTGTCAGGACAGGAAGTGGATaGTTGGATGCAGTCCCATCA +
Preference number: 4 (lower is better)
Translates to: YNPSRTKLCLGPFAPNTVRTGSG*LDAVPS
Trigger: TGATGGGACTGCATCCAACCATCCACTTCCTGTCCT...GACAGTGTTGGGAGCAAATGGCCCCAGGCAAAGTTTAGTTCTAGAAGGATTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR CCA 90 bp GGGGCCATTTGCTCCCAACACTGTCCATTTAATTACAGGCAACTGTGTGTGTTTTATCAGAGCCACTCCTaGGTTACCTCCTTCCATTTC +
Preference number: 4 (lower is better)
Translates to: GAICSQHCPFNYRQLCVFYQSHS*VTSFHF
Trigger: GAAATGGAAGGAGGTAACCCAGGAGTGGCTCTGATA...AAACACACACAGTTGCCTGTAATTAAATGGACAGTGTTGGGAGCAAATGGCCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR CCA 90 bp ATAATCCTTCTAGAACTAAACTTTGCCTGGGGCCATTTGCTCCCAACACTGTCCTTCTGTCTGCATCCTTaGGGATGGTATAGGTCAGCT +
Preference number: 4 (lower is better)
Translates to: IILLELNFAWGHLLPTLSFCLHP*GWYRSA
Trigger: AGCTGACCTATACCATCCCCAAGGATGCAGACAGAA...GGACAGTGTTGGGAGCAAATGGCCCCAGGCAAAGTTTAGTTCTAGAAGGATTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR CCA 90 bp ATAATCCTTCTAGAACTAAACTTTGCCTGGGGCCATTTGCTCCCAACACTGTCCCCTTGGTTTTGCAGATaGCACCAGCAAGTACTCTTC +
Preference number: 4 (lower is better)
Translates to: IILLELNFAWGHLLPTLSPWFCR*HQQVLF
Trigger: GAAGAGTACTTGCTGGTGCCATCTGCAAAACCAAGG...GGACAGTGTTGGGAGCAAATGGCCCCAGGCAAAGTTTAGTTCTAGAAGGATTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR TCA 90 bp GCTATGTATAATCCTTCTAGAACTAAACTTTGCCTGGGGCCATTTGCTCCCAACGTACTGTCAGAATCATaGACAGGATACACGGCCAGA +
Preference number: 4 (lower is better)
Translates to: AMYNPSRTKLCLGPFAPNVLSES*TGYTAR
Trigger: TCTGGCCGTGTATCCTGTTCATGATTCTGACAGTAC...GTTGGGAGCAAATGGCCCCAGGCAAAGTTTAGTTCTAGAAGGATTATACATAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR TCA 90 bp CTGAGTCTGTCACAGACAACCTGTCACCTACCTGGTGTGGCAATCAGCAGAAAATTACAAAGAAGTCCTTaGACAAAAGGAAGAACACCC +
Preference number: 4 (lower is better)
Translates to: LSLSQTTCHLPGVAISRKLQRSP*TKGRTP
Trigger: GGGTGTTCTTCCTTTTGTTCAAGGACTTCTTTGTAA...TTTTCTGCTGATTGCCACACCAGGTAGGTGACAGGTTGTCTGTGACAGACTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR TCA 90 bp GGGGCCATTTGCTCCCAACACTGTCCATTTAATTACAGGCAACTGTGTGTGTTTATGCTATCTTCCAAGTaGGCACTGGACATGTACAGT +
Preference number: 4 (lower is better)
Translates to: GAICSQHCPFNYRQLCVFMLSSK*ALDMYS
Trigger: ACTGTACATGTCCAGTGCTCACTTGGAAGATAGCAT...AAACACACACAGTTGCCTGTAATTAAATGGACAGTGTTGGGAGCAAATGGCCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR TCA 90 bp TTCCTGCACTTCTTAGTTTGGACTCTTGTCAGTTCATGGCTGAGTCTGTCACAGTTGTGTGTCCTGCAATaGCAGCTTGCAAACTATGAC +
Preference number: 4 (lower is better)
Translates to: FLHFLVWTLVSSWLSLSQLCVLQ*QLANYD
Trigger: GTCATAGTTTGCAAGCTGTCATTGCAGGACACACAA...CTGTGACAGACTCAGCCATGAACTGACAAGAGTCCAAACTAAGAAGTGCAGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR TCA 90 bp GGGGCCATTTGCTCCCAACACTGTCCATTTAATTACAGGCAACTGTGTGTGTTTTCAGTGAGGTGCTCTTaGTCTAGCATATGGCTGAAA +
Preference number: 4 (lower is better)
Translates to: GAICSQHCPFNYRQLCVFSVRCS*SSIWLK
Trigger: TTTCAGCCATATGCTAGATCAAGAGCACCTCACTGA...AAACACACACAGTTGCCTGTAATTAAATGGACAGTGTTGGGAGCAAATGGCCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR TCA 90 bp GGGGCCATTTGCTCCCAACACTGTCCATTTAATTACAGGCAACTGTGTGTGTTTGTATGGCATTGGCTCTaGGCCATGAAGAATTACCAT +
Preference number: 4 (lower is better)
Translates to: GAICSQHCPFNYRQLCVFVWHWL*AMKNYH
Trigger: ATGGTAATTCTTCATGGCTCAGAGCCAATGCCATAC...AAACACACACAGTTGCCTGTAATTAAATGGACAGTGTTGGGAGCAAATGGCCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR TCA 90 bp TGGACTGGCATAAAGCAGGAATGCATATGGCAATTTCTTTATATCACACCATACCAGCCACGTGGTCACTaGGCATCTCAGCTTCATCCA +
Preference number: 4 (lower is better)
Translates to: WTGIKQECIWQFLYITPYQPRGH*ASQLHP
Trigger: TGGATGAAGCTGAGATGCTCAGTGACCACGTGGCTG...GTATGGTGTGATATAAAGAAATTGCCATATGCATTCCTGCTTTATGCCAGTCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR TCA 90 bp GGGGCCATTTGCTCCCAACACTGTCCATTTAATTACAGGCAACTGTGTGTGTTTACAAGATCAGGTTGTTaGGATGATTCAGGTAGGAGG +
Preference number: 4 (lower is better)
Translates to: GAICSQHCPFNYRQLCVFTRSGC*DDSGRR
Trigger: CCTCCTACCTGAATCATCTCAACAACCTGATCTTGT...AAACACACACAGTTGCCTGTAATTAAATGGACAGTGTTGGGAGCAAATGGCCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR TCA 90 bp TTTGAGATTCTATCCCTCAGAGATTATGCTGAGAACATGAGTTTCCACAAGGCTGAAACTGCACTAGGCTaGCTTCCTTCCTTGTGGAGC +
Preference number: 4 (lower is better)
Translates to: FEILSLRDYAENMSFHKAETALG*LPSLWS
Trigger: GCTCCACAAGGAAGGAAGTCAGCCTAGTGCAGTTTC...AGCCTTGTGGAAACTCATGTTCTCAGCATAATCTCTGAGGGATAGAATCTCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR GCA 90 bp TTTGAGATTCTATCCCTCAGAGATTATGCTGAGAACATGAGTTTCCACAAGGCTAAAGCCTTCATCTGCTaGGAACAGCTGCTTGAGGCC +
Preference number: 4 (lower is better)
Translates to: FEILSLRDYAENMSFHKAKAFIC*EQLLEA
Trigger: GGCCTCAAGCAGCTGTTCGCAGCAGATGAAGGCTTT...AGCCTTGTGGAAACTCATGTTCTCAGCATAATCTCTGAGGGATAGAATCTCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR GCA 90 bp TCCTCTTGGTTCCTGCACTTCTTAGTTTGGACTCTTGTCAGTTCATGGCTGAGTCAGGGAAGGATTTTCTaGAAAGATAATGAGCACCCG +
Preference number: 4 (lower is better)
Translates to: SSWFLHFLVWTLVSSWLSQGRIF*KDNEHP
Trigger: CGGGTGCTCATTATCTTTGCAGAAAATCCTTCCCTG...ACTCAGCCATGAACTGACAAGAGTCCAAACTAAGAAGTGCAGGAACCAAGAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR GCA 90 bp GGGGCCATTTGCTCCCAACACTGTCCATTTAATTACAGGCAACTGTGTGTGTTTCTTCAGCAAGCCATTTaGTTCAGAGGGTATCAGAGT +
Preference number: 4 (lower is better)
Translates to: GAICSQHCPFNYRQLCVFLQQAI*FRGYQS
Trigger: ACTCTGATACCCTCTGAAGCAAATGGCTTGCTGAAG...AAACACACACAGTTGCCTGTAATTAAATGGACAGTGTTGGGAGCAAATGGCCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR GCA 90 bp TCCTCTTGGTTCCTGCACTTCTTAGTTTGGACTCTTGTCAGTTCATGGCTGAGTGCCAAGAAACTATTCTaGTGCATGAGTTCATGTGCC +
Preference number: 4 (lower is better)
Translates to: SSWFLHFLVWTLVSSWLSAKKLF*CMSSCA
Trigger: GGCACATGAACTCATGCAGCAGAATAGTTTCTTGGC...ACTCAGCCATGAACTGACAAGAGTCCAAACTAAGAAGTGCAGGAACCAAGAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR CCA 90 bp CACTGTCCATTTAATTACAGGCAACTGTGTGTGTTTAAACCCAGGATATTAGGCACATGTCTAGAAACCTaGGGGATGGTCTGGTGCAGG +
Preference number: 4 (lower is better)
Translates to: HCPFNYRQLCVFKPRILGTCLET*GMVWCR
Trigger: CCTGCACCAGACCATCCCCCAGGTTTCTAGACATGT...GCCTAATATCCTGGGTTTAAACACACACAGTTGCCTGTAATTAAATGGACAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR CCA 90 bp TTCCTGCACTTCTTAGTTTGGACTCTTGTCAGTTCATGGCTGAGTCTGTCACAGGCACATCAAAGCTTCTaGAACAATAGCTGGCTCATC +
Preference number: 4 (lower is better)
Translates to: FLHFLVWTLVSSWLSLSQAHQSF*NNSWLI
Trigger: GATGAGCCAGCTATTGTTCCAGAAGCTTTGATGTGC...CTGTGACAGACTCAGCCATGAACTGACAAGAGTCCAAACTAAGAAGTGCAGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR CCA 90 bp CTGAGTCTGTCACAGACAACCTGTCACCTACCTGGTGTGGCAATCAGCAGAAAAAAAACTGTTGTAATCTaGGTGAAACAGAGTGCGTGT +
Preference number: 4 (lower is better)
Translates to: LSLSQTTCHLPGVAISRKKTVVI*VKQSAC
Trigger: ACACGCACTCTGTTTCACCCAGATTACAACAGTTTT...TTTTCTGCTGATTGCCACACCAGGTAGGTGACAGGTTGTCTGTGACAGACTCAG
46% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR CCA 90 bp TATAATCCTTCTAGAACTAAACTTTGCCTGGGGCCATTTGCTCCCAACACTGTCCCATCATTTCATCCTTaGTCCTCCCATCCTTTGCTG +
Preference number: 4 (lower is better)
Translates to: YNPSRTKLCLGPFAPNTVPSFHP*SSHPLL
Trigger: CAGCAAAGGATGGGAGGACCAAGGATGAAATGATGG...GACAGTGTTGGGAGCAAATGGCCCCAGGCAAAGTTTAGTTCTAGAAGGATTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR CCA 90 bp TTCCTGCACTTCTTAGTTTGGACTCTTGTCAGTTCATGGCTGAGTCTGTCACAGCTAAGATGCTGTGGATaGTTTCCTCAGAGATGTGGA +
Preference number: 4 (lower is better)
Translates to: FLHFLVWTLVSSWLSLSQLRCCG*FPQRCG
Trigger: TCCACATCTCTGAGGAAACCATCCACAGCATCTTAG...CTGTGACAGACTCAGCCATGAACTGACAAGAGTCCAAACTAAGAAGTGCAGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR CCA 90 bp GGGGCCATTTGCTCCCAACACTGTCCATTTAATTACAGGCAACTGTGTGTGTTTGCTTCTAAGATGCTGTaGATGGTTTCCTCAGAGATG +
Preference number: 4 (lower is better)
Translates to: GAICSQHCPFNYRQLCVFASKML*MVSSEM
Trigger: CATCTCTGAGGAAACCATCCACAGCATCTTAGAAGC...AAACACACACAGTTGCCTGTAATTAAATGGACAGTGTTGGGAGCAAATGGCCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR CCA 90 bp TTCCTGCACTTCTTAGTTTGGACTCTTGTCAGTTCATGGCTGAGTCTGTCACAGGTAACAAATCTGAGGTaGTGCTTTTCCAGGCTCGAA +
Preference number: 4 (lower is better)
Translates to: FLHFLVWTLVSSWLSLSQVTNLR*CFSRLE
Trigger: TTCGAGCCTGGAAAAGCACCACCTCAGATTTGTTAC...CTGTGACAGACTCAGCCATGAACTGACAAGAGTCCAAACTAAGAAGTGCAGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR CCA 90 bp CTGAGTCTGTCACAGACAACCTGTCACCTACCTGGTGTGGCAATCAGCAGAAAACATCAGATACATCCATaGAATCATTGCGTATCCGAA +
Preference number: 4 (lower is better)
Translates to: LSLSQTTCHLPGVAISRKHQIHP*NHCVSE
Trigger: TTCGGATACGCAATGATTCCATGGATGTATCTGATG...TTTTCTGCTGATTGCCACACCAGGTAGGTGACAGGTTGTCTGTGACAGACTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR CCA 90 bp CTGAGTCTGTCACAGACAACCTGTCACCTACCTGGTGTGGCAATCAGCAGAAAAAACTGGAGAAGATTCTaGACATCAGATACATCCATG +
Preference number: 4 (lower is better)
Translates to: LSLSQTTCHLPGVAISRKNWRRF*TSDTSM
Trigger: CATGGATGTATCTGATGTCCAGAATCTTCTCCAGTT...TTTTCTGCTGATTGCCACACCAGGTAGGTGACAGGTTGTCTGTGACAGACTCAG
46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR TCA 90 bp GGGGCCATTTGCTCCCAACACTGTCCATTTAATTACAGGCAACTGTGTGTGTTTTGGAACTCTCAAAGCTaGTGTTTCTACAACTTGAGC +
Preference number: 4 (lower is better)
Translates to: GAICSQHCPFNYRQLCVFWNSQS*CFYNLS
Trigger: GCTCAAGTTGTAGAAACATCAGCTTTGAGAGTTCCA...AAACACACACAGTTGCCTGTAATTAAATGGACAGTGTTGGGAGCAAATGGCCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR TCA 90 bp TTTGAGATTCTATCCCTCAGAGATTATGCTGAGAACATGAGTTTCCACAAGGCTAGGGTGTGCAACTTCTaGTCCACCACTAAAAGGTGC +
Preference number: 4 (lower is better)
Translates to: FEILSLRDYAENMSFHKARVCNF*STTKRC
Trigger: GCACCTTTTAGTGGTGGATCAGAAGTTGCACACCCT...AGCCTTGTGGAAACTCATGTTCTCAGCATAATCTCTGAGGGATAGAATCTCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR TCA 90 bp GGGGCCATTTGCTCCCAACACTGTCCATTTAATTACAGGCAACTGTGTGTGTTTTTTTCAGTGACCAGATaGTCAAATTCCAGAAGCTCC +
Preference number: 4 (lower is better)
Translates to: GAICSQHCPFNYRQLCVFFSVTR*SNSRSS
Trigger: GGAGCTTCTGGAATTTGATCATCTGGTCACTGAAAA...AAACACACACAGTTGCCTGTAATTAAATGGACAGTGTTGGGAGCAAATGGCCCC
44% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR TCA 90 bp GCTATGTATAATCCTTCTAGAACTAAACTTTGCCTGGGGCCATTTGCTCCCAACATGGTAGCATTTTCCTaGATGAAGCATTCACTCGCC +
Preference number: 4 (lower is better)
Translates to: AMYNPSRTKLCLGPFAPNMVAFS*MKHSLA
Trigger: GGCGAGTGAATGCTTCATTCAGGAAAATGCTACCAT...GTTGGGAGCAAATGGCCCCAGGCAAAGTTTAGTTCTAGAAGGATTATACATAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR TCA 90 bp GCTATGTATAATCCTTCTAGAACTAAACTTTGCCTGGGGCCATTTGCTCCCAACTTCCAGAAGATGACATaGAGAGCAGTACCTTATGCC +
Preference number: 4 (lower is better)
Translates to: AMYNPSRTKLCLGPFAPNFQKMT*RAVPYA
Trigger: GGCATAAGGTACTGCTCTTCATGTCATCTTCTGGAA...GTTGGGAGCAAATGGCCCCAGGCAAAGTTTAGTTCTAGAAGGATTATACATAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR TCA 90 bp ATAATCCTTCTAGAACTAAACTTTGCCTGGGGCCATTTGCTCCCAACACTGTCCATGCTGCCATTACCTTaGATTCCAGAAGATGACATG +
Preference number: 4 (lower is better)
Translates to: IILLELNFAWGHLLPTLSMLPLP*IPEDDM
Trigger: CATGTCATCTTCTGGAATTCAAGGTAATGGCAGCAT...GGACAGTGTTGGGAGCAAATGGCCCCAGGCAAAGTTTAGTTCTAGAAGGATTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR TCA 90 bp CACTGTCCATTTAATTACAGGCAACTGTGTGTGTTTAAACCCAGGATATTAGGCAGGAGTTCCAGAAGTTaGGGAAGTTGCACAGTGGTG +
Preference number: 4 (lower is better)
Translates to: HCPFNYRQLCVFKPRILGRSSRS*GSCTVV
Trigger: CACCACTGTGCAACTTCCTCAACTTCTGGAACTCCT...GCCTAATATCCTGGGTTTAAACACACACAGTTGCCTGTAATTAAATGGACAGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR TCA 90 bp TCCTCTTGGTTCCTGCACTTCTTAGTTTGGACTCTTGTCAGTTCATGGCTGAGTTCTGCAGATCTTCAGTaGGCTTGTCCATGTCAATAT +
Preference number: 4 (lower is better)
Translates to: SSWFLHFLVWTLVSSWLSSADLQ*ACPCQY
Trigger: ATATTGACATGGACAAGCTCACTGAAGATCTGCAGA...ACTCAGCCATGAACTGACAAGAGTCCAAACTAAGAAGTGCAGGAACCAAGAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR TCA 90 bp GCTATGTATAATCCTTCTAGAACTAAACTTTGCCTGGGGCCATTTGCTCCCAACTGCCAAAGTCCTCATTaGAGAAGAACAGACCAGAAC +
Preference number: 4 (lower is better)
Translates to: AMYNPSRTKLCLGPFAPNCQSPH*RRTDQN
Trigger: GTTCTGGTCTGTTCTTCTTCAATGAGGACTTTGGCA...GTTGGGAGCAAATGGCCCCAGGCAAAGTTTAGTTCTAGAAGGATTATACATAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR TCA 90 bp TATAATCCTTCTAGAACTAAACTTTGCCTGGGGCCATTTGCTCCCAACACTGTCCATCAAGAGTTTTGTTaGCTTGCTGCTGTAGCTCCT +
Preference number: 4 (lower is better)
Translates to: YNPSRTKLCLGPFAPNTVHQEFC*LAAVAP
Trigger: AGGAGCTACAGCAGCAAGTCAACAAAACTCTTGATG...GACAGTGTTGGGAGCAAATGGCCCCAGGCAAAGTTTAGTTCTAGAAGGATTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR TCA 90 bp GCTATGTATAATCCTTCTAGAACTAAACTTTGCCTGGGGCCATTTGCTCCCAACTGTGGAGCCAAACTTTaGCTGTGTAACCATCACCAA +
Preference number: 4 (lower is better)
Translates to: AMYNPSRTKLCLGPFAPNCGAKL*LCNHHQ
Trigger: TTGGTGATGGTTACACAGTCAAAGTTTGGCTCCACA...GTTGGGAGCAAATGGCCCCAGGCAAAGTTTAGTTCTAGAAGGATTATACATAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR GCA 90 bp TGGACTGGCATAAAGCAGGAATGCATATGGCAATTTCTTTATATCACACCATACAGCAGACTACCCTGCTaGCACTGGTCAAACACCTGT +
Preference number: 4 (lower is better)
Translates to: WTGIKQECIWQFLYITPYSRLPC*HWSNTC
Trigger: ACAGGTGTTTGACCAGTGGCAGCAGGGTAGTCTGCT...GTATGGTGTGATATAAAGAAATTGCCATATGCATTCCTGCTTTATGCCAGTCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR GCA 90 bp GGGGCCATTTGCTCCCAACACTGTCCATTTAATTACAGGCAACTGTGTGTGTTTAAGGATGAAGGCATGTaGCTCTGGATATTACAGTCT +
Preference number: 4 (lower is better)
Translates to: GAICSQHCPFNYRQLCVFKDEGM*LWILQS
Trigger: AGACTGTAATATCCAGAGGCACATGCCTTCATCCTT...AAACACACACAGTTGCCTGTAATTAAATGGACAGTGTTGGGAGCAAATGGCCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR GCA 90 bp ATAATCCTTCTAGAACTAAACTTTGCCTGGGGCCATTTGCTCCCAACACTGTCCAATCAGGACAGCCTTTaGAAGCTGATAACGAGTAGT +
Preference number: 4 (lower is better)
Translates to: IILLELNFAWGHLLPTLSNQDSL*KLITSS
Trigger: ACTACTCGTTATCAGCTTGCAAAGGCTGTCCTGATT...GGACAGTGTTGGGAGCAAATGGCCCCAGGCAAAGTTTAGTTCTAGAAGGATTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR GCA 90 bp GGGGCCATTTGCTCCCAACACTGTCCATTTAATTACAGGCAACTGTGTGTGTTTATCTCAAAAACACTTTaGTCAGCTTGTGGGACTTCC +
Preference number: 4 (lower is better)
Translates to: GAICSQHCPFNYRQLCVFISKTL*SACGTS
Trigger: GGAAGTCCCACAAGCTGAGCAAAGTGTTTTTGAGAT...AAACACACACAGTTGCCTGTAATTAAATGGACAGTGTTGGGAGCAAATGGCCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR GCA 90 bp GCTATGTATAATCCTTCTAGAACTAAACTTTGCCTGGGGCCATTTGCTCCCAACATCCGTCCATATGTCTaGAGATCTTCAGTGAGCTTG +
Preference number: 4 (lower is better)
Translates to: AMYNPSRTKLCLGPFAPNIRPYV*RSSVSL
Trigger: CAAGCTCACTGAAGATCTGCAGACATATGGACGGAT...GTTGGGAGCAAATGGCCCCAGGCAAAGTTTAGTTCTAGAAGGATTATACATAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR GCA 90 bp TGGACTGGCATAAAGCAGGAATGCATATGGCAATTTCTTTATATCACACCATACCTGCATGAGTTCATGTaGCTTGGTCTCCAGGGTGTC +
Preference number: 4 (lower is better)
Translates to: WTGIKQECIWQFLYITPYLHEFM*LGLQGV
Trigger: GACACCCTGGAGACCAAGGCACATGAACTCATGCAG...GTATGGTGTGATATAAAGAAATTGCCATATGCATTCCTGCTTTATGCCAGTCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR GCA 90 bp TTTGAGATTCTATCCCTCAGAGATTATGCTGAGAACATGAGTTTCCACAAGGCTAGAATCCCAGGACAATaGAGAGGGCAACACCACACT +
Preference number: 4 (lower is better)
Translates to: FEILSLRDYAENMSFHKARIPGQ*RGQHHT
Trigger: AGTGTGGTGTTGCCCTCTGCATTGTCCTGGGATTCT...AGCCTTGTGGAAACTCATGTTCTCAGCATAATCTCTGAGGGATAGAATCTCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR GCA 90 bp TCCTCTTGGTTCCTGCACTTCTTAGTTTGGACTCTTGTCAGTTCATGGCTGAGTTCTTGTGTTATTGTTTaGCAGAGGTACCGCTTAGAG +
Preference number: 4 (lower is better)
Translates to: SSWFLHFLVWTLVSSWLSSCVIV*QRYRLE
Trigger: CTCTAAGCGGTACCTCTGGCAAACAATAACACAAGA...ACTCAGCCATGAACTGACAAGAGTCCAAACTAAGAAGTGCAGGAACCAAGAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR CCA 90 bp TTTGAGATTCTATCCCTCAGAGATTATGCTGAGAACATGAGTTTCCACAAGGCTTCAGCTCTTGGAAGCTaGAAGACCCGAGAACAGGTA +
Preference number: 4 (lower is better)
Translates to: FEILSLRDYAENMSFHKASALGS*KTREQV
Trigger: TACCTGTTCTCGGGTCTTCCAGCTTCCAAGAGCTGA...AGCCTTGTGGAAACTCATGTTCTCAGCATAATCTCTGAGGGATAGAATCTCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR CCA 90 bp TCCTCTTGGTTCCTGCACTTCTTAGTTTGGACTCTTGTCAGTTCATGGCTGAGTAGTTCTTTCTTCTTGTaGAATGCCATTGAGCCGGAA +
Preference number: 4 (lower is better)
Translates to: SSWFLHFLVWTLVSSWLSSSFFL*NAIEPE
Trigger: TTCCGGCTCAATGGCATTCCACAAGAAGAAAGAACT...ACTCAGCCATGAACTGACAAGAGTCCAAACTAAGAAGTGCAGGAACCAAGAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR CCA 90 bp TATAATCCTTCTAGAACTAAACTTTGCCTGGGGCCATTTGCTCCCAACACTGTCATAGCTCCGAGAGAATaGAATTCCAGTCTGCTAGGT +
Preference number: 4 (lower is better)
Translates to: YNPSRTKLCLGPFAPNTVIAPRE*NSSLLG
Trigger: ACCTAGCAGACTGGAATTCCATTCTCTCGGAGCTAT...GACAGTGTTGGGAGCAAATGGCCCCAGGCAAAGTTTAGTTCTAGAAGGATTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR CCA 90 bp TGGACTGGCATAAAGCAGGAATGCATATGGCAATTTCTTTATATCACACCATACACTTTGCTCAGCTTGTaGGACTTCCTGCCAGTGCTC +
Preference number: 4 (lower is better)
Translates to: WTGIKQECIWQFLYITPYTLLSL*DFLPVL
Trigger: GAGCACTGGCAGGAAGTCCCACAAGCTGAGCAAAGT...GTATGGTGTGATATAAAGAAATTGCCATATGCATTCCTGCTTTATGCCAGTCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR CCA 90 bp TTCCTGCACTTCTTAGTTTGGACTCTTGTCAGTTCATGGCTGAGTCTGTCACAGATGTACTCTTCTATCTaGATCTCTCGCTCATACACC +
Preference number: 4 (lower is better)
Translates to: FLHFLVWTLVSSWLSLSQMYSSI*ISRSYT
Trigger: GGTGTATGAGCGAGAGATCCAGATAGAAGAGTACAT...CTGTGACAGACTCAGCCATGAACTGACAAGAGTCCAAACTAAGAAGTGCAGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR CCA 90 bp TGGACTGGCATAAAGCAGGAATGCATATGGCAATTTCTTTATATCACACCATACAACCAGGACAGGAAGTaGATGGTTGGATGCAGTCCC +
Preference number: 4 (lower is better)
Translates to: WTGIKQECIWQFLYITPYNQDRK*MVGCSP
Trigger: GGGACTGCATCCAACCATCCACTTCCTGTCCTGGTT...GTATGGTGTGATATAAAGAAATTGCCATATGCATTCCTGCTTTATGCCAGTCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR CCA 90 bp TATAATCCTTCTAGAACTAAACTTTGCCTGGGGCCATTTGCTCCCAACACTGTCCTTGTCCAAAGGCTGTaGTTGAAAGCAAGCACAGAA +
Preference number: 4 (lower is better)
Translates to: YNPSRTKLCLGPFAPNTVLVQRL*LKASTE
Trigger: TTCTGTGCTTGCTTTCAACCACAGCCTTTGGACAAG...GACAGTGTTGGGAGCAAATGGCCCCAGGCAAAGTTTAGTTCTAGAAGGATTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR CCA 90 bp GGGGCCATTTGCTCCCAACACTGTCCATTTAATTACAGGCAACTGTGTGTGTTTACCAAGGTGCTTTTATaGAGGCAAAGAGCATTAGGT +
Preference number: 4 (lower is better)
Translates to: GAICSQHCPFNYRQLCVFTKVLL*RQRALG
Trigger: ACCTAATGCTCTTTGCCTCCATAAAAGCACCTTGGT...AAACACACACAGTTGCCTGTAATTAAATGGACAGTGTTGGGAGCAAATGGCCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR CCA 90 bp TTCCTGCACTTCTTAGTTTGGACTCTTGTCAGTTCATGGCTGAGTCTGTCACAGTCAGCTTCATCCAGGTaGTGGGTTGTGAAGATAATT +
Preference number: 4 (lower is better)
Translates to: FLHFLVWTLVSSWLSLSQSASSR*WVVKII
Trigger: AATTATCTTCACAACCCACCACCTGGATGAAGCTGA...CTGTGACAGACTCAGCCATGAACTGACAAGAGTCCAAACTAAGAAGTGCAGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR CCA 90 bp TGGACTGGCATAAAGCAGGAATGCATATGGCAATTTCTTTATATCACACCATACCACGAGCCACATCCTTaGGCTCCTGTGTTTCTAGGA +
Preference number: 4 (lower is better)
Translates to: WTGIKQECIWQFLYITPYHEPHP*APVFLG
Trigger: TCCTAGAAACACAGGAGCCCAAGGATGTGGCTCGTG...GTATGGTGTGATATAAAGAAATTGCCATATGCATTCCTGCTTTATGCCAGTCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR CCA 90 bp CATAGTCTGTGGGATTCTAAGCGTGTTATAAATGACAAACATCTTCAATTTTGCTGTGTCCCAGGCAGTTaGTCAGAGAGGGAGCACCAG +
Preference number: 4 (lower is better)
Translates to: HSLWDSKRVINDKHLQFCCVPGS*SEREHQ
Trigger: CTGGTGCTCCCTCTCTGACCAACTGCCTGGGACACA...GCAAAATTGAAGATGTTTGTCATTTATAACACGCTTAGAATCCCACAGACTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR CCA 90 bp CATAGTCTGTGGGATTCTAAGCGTGTTATAAATGACAAACATCTTCAATTTTGCAGGGCAACACCACACTaGCGGATGCTCTCCAGGATC +
Preference number: 4 (lower is better)
Translates to: HSLWDSKRVINDKHLQFCRATPH*RMLSRI
Trigger: GATCCTGGAGAGCATCCGCCAGTGTGGTGTTGCCCT...GCAAAATTGAAGATGTTTGTCATTTATAACACGCTTAGAATCCCACAGACTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR CCA 90 bp GCTATGTATAATCCTTCTAGAACTAAACTTTGCCTGGGGCCATTTGCTCCCAACTGGGATGTACTGCTTTaGAATTCCACGGAGTCTACA +
Preference number: 4 (lower is better)
Translates to: AMYNPSRTKLCLGPFAPNWDVLL*NSTEST
Trigger: TGTAGACTCCGTGGAATTCCAAAGCAGTACATCCCA...GTTGGGAGCAAATGGCCCCAGGCAAAGTTTAGTTCTAGAAGGATTATACATAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR CCA 90 bp GGGGCCATTTGCTCCCAACACTGTCCATTTAATTACAGGCAACTGTGTGTGTTTCTTAAACTGGATTCCTaGGAAATGGAGCTTCAAGCA +
Preference number: 4 (lower is better)
Translates to: GAICSQHCPFNYRQLCVFLKLDS*EMELQA
Trigger: TGCTTGAAGCTCCATTTCCCAGGAATCCAGTTTAAG...AAACACACACAGTTGCCTGTAATTAAATGGACAGTGTTGGGAGCAAATGGCCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR TCA 90 bp TGGACTGGCATAAAGCAGGAATGCATATGGCAATTTCTTTATATCACACCATACGTAGTTCTTGACTGCTaGCCACTTGGGATGACAGTC +
Preference number: 4 (lower is better)
Translates to: WTGIKQECIWQFLYITPYVVLDC*PLGMTV
Trigger: GACTGTCATCCCAAGTGGTCAGCAGTCAAGAACTAC...GTATGGTGTGATATAAAGAAATTGCCATATGCATTCCTGCTTTATGCCAGTCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR TCA 90 bp TTCCTGCACTTCTTAGTTTGGACTCTTGTCAGTTCATGGCTGAGTCTGTCACAGACATCTTCAAGTATGTaGGATACCACTATGGAGACA +
Preference number: 4 (lower is better)
Translates to: FLHFLVWTLVSSWLSLSQTSSSM*DTTMET
Trigger: TGTCTCCATAGTGGTATCTCACATACTTGAAGATGT...CTGTGACAGACTCAGCCATGAACTGACAAGAGTCCAAACTAAGAAGTGCAGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR TCA 90 bp TATAATCCTTCTAGAACTAAACTTTGCCTGGGGCCATTTGCTCCCAACACTGTCCTTCCTGACGATTTTTaGGAGGATTTTCCAGTAGGA +
Preference number: 4 (lower is better)
Translates to: YNPSRTKLCLGPFAPNTVLPDDF*EDFPVG
Trigger: TCCTACTGGAAAATCCTCTCAAAAATCGTCAGGAAG...GACAGTGTTGGGAGCAAATGGCCCCAGGCAAAGTTTAGTTCTAGAAGGATTATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR TCA 90 bp CACTGTCCATTTAATTACAGGCAACTGTGTGTGTTTAAACCCAGGATATTAGGCAACTCACCTCTGCAGTaGCATCGCTATGCAATCCAT +
Preference number: 4 (lower is better)
Translates to: HCPFNYRQLCVFKPRILGNSPLQ*HRYAIH
Trigger: ATGGATTGCATAGCGATGTCACTGCAGAGGTGAGTT...GCCTAATATCCTGGGTTTAAACACACACAGTTGCCTGTAATTAAATGGACAGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR TCA 90 bp TTTGAGATTCTATCCCTCAGAGATTATGCTGAGAACATGAGTTTCCACAAGGCTTACCGGATTACATCATaGGTTCTCTCCTGTTTCGGG +
Preference number: 4 (lower is better)
Translates to: FEILSLRDYAENMSFHKAYRITS*VLSCFG
Trigger: CCCGAAACAGGAGAGAACTCATGATGTAATCCGGTA...AGCCTTGTGGAAACTCATGTTCTCAGCATAATCTCTGAGGGATAGAATCTCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR TCA 90 bp TCCTCTTGGTTCCTGCACTTCTTAGTTTGGACTCTTGTCAGTTCATGGCTGAGTATTGGCTCTGAGCCATaGAGAATTACCATCATTTCA +
Preference number: 4 (lower is better)
Translates to: SSWFLHFLVWTLVSSWLSIGSEP*RITIIS
Trigger: TGAAATGATGGTAATTCTTCATGGCTCAGAGCCAAT...ACTCAGCCATGAACTGACAAGAGTCCAAACTAAGAAGTGCAGGAACCAAGAGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR TCA 90 bp GGGGCCATTTGCTCCCAACACTGTCCATTTAATTACAGGCAACTGTGTGTGTTTAGCTGCTGGAAAACTTaGCACATCTCAAAAACACTT +
Preference number: 4 (lower is better)
Translates to: GAICSQHCPFNYRQLCVFSCWKT*HISKTL
Trigger: AAGTGTTTTTGAGATGTGTCAAGTTTTCCAGCAGCT...AAACACACACAGTTGCCTGTAATTAAATGGACAGTGTTGGGAGCAAATGGCCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR TCA 90 bp TATAATCCTTCTAGAACTAAACTTTGCCTGGGGCCATTTGCTCCCAACACTGTCTCCAATATGATGCAGTaGAGGGGAAATACCATGGTT +
Preference number: 4 (lower is better)
Translates to: YNPSRTKLCLGPFAPNTVSNMMQ*RGNTMV
Trigger: AACCATGGTATTTCCCCTTCACTGCATCATATTGGA...GACAGTGTTGGGAGCAAATGGCCCCAGGCAAAGTTTAGTTCTAGAAGGATTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR TCA 90 bp GCTATGTATAATCCTTCTAGAACTAAACTTTGCCTGGGGCCATTTGCTCCCAACCTCCACAGCTATCTTTaGGGAATGCTTGTGGAATAT +
Preference number: 4 (lower is better)
Translates to: AMYNPSRTKLCLGPFAPNLHSYL*GMLVEY
Trigger: ATATTCCACAAGCATTCCTCAAAGATAGCTGTGGAG...GTTGGGAGCAAATGGCCCCAGGCAAAGTTTAGTTCTAGAAGGATTATACATAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR TCA 90 bp TATAATCCTTCTAGAACTAAACTTTGCCTGGGGCCATTTGCTCCCAACACTGTCTTGAAGAATTCATCCTaGAAGCATCAGCACAGACAG +
Preference number: 4 (lower is better)
Translates to: YNPSRTKLCLGPFAPNTVLKNSS*KHQHRQ
Trigger: CTGTCTGTGCTGATGCTTTCAGGATGAATTCTTCAA...GACAGTGTTGGGAGCAAATGGCCCCAGGCAAAGTTTAGTTCTAGAAGGATTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR GCA 90 bp GCTATGTATAATCCTTCTAGAACTAAACTTTGCCTGGGGCCATTTGCTCCCAACAGAGCTATTGAGACTTaGTCCTGTGTCAGAAAGCTA +
Preference number: 4 (lower is better)
Translates to: AMYNPSRTKLCLGPFAPNRAIET*SCVRKL
Trigger: TAGCTTTCTGACACAGGAGCAAGTCTCAATAGCTCT...GTTGGGAGCAAATGGCCCCAGGCAAAGTTTAGTTCTAGAAGGATTATACATAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR GCA 90 bp GCTATGTATAATCCTTCTAGAACTAAACTTTGCCTGGGGCCATTTGCTCCCAACCATTTCCTTCCCCAATaGTATGATGTGCTGCCAAAT +
Preference number: 4 (lower is better)
Translates to: AMYNPSRTKLCLGPFAPNHFLPQ*YDVLPN
Trigger: ATTTGGCAGCACATCATAGCATTGGGGAAGGAAATG...GTTGGGAGCAAATGGCCCCAGGCAAAGTTTAGTTCTAGAAGGATTATACATAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR GCA 90 bp GCTATGTATAATCCTTCTAGAACTAAACTTTGCCTGGGGCCATTTGCTCCCAACGCCTTCTTGAGAGATTaGATGAGAGATGTCACTTTC +
Preference number: 4 (lower is better)
Translates to: AMYNPSRTKLCLGPFAPNAFLRD*MRDVTF
Trigger: GAAAGTGACATCTCTCATGCAATCTCTCAAGAAGGC...GTTGGGAGCAAATGGCCCCAGGCAAAGTTTAGTTCTAGAAGGATTATACATAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR GCA 90 bp TATAATCCTTCTAGAACTAAACTTTGCCTGGGGCCATTTGCTCCCAACACTGTCACCAAAGTGACTCCTTaGAAAGCAGCTAAGATAAGG +
Preference number: 4 (lower is better)
Translates to: YNPSRTKLCLGPFAPNTVTKVTP*KAAKIR
Trigger: CCTTATCTTAGCTGCTTTGCAAGGAGTCACTTTGGT...GACAGTGTTGGGAGCAAATGGCCCCAGGCAAAGTTTAGTTCTAGAAGGATTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR GCA 90 bp TGGACTGGCATAAAGCAGGAATGCATATGGCAATTTCTTTATATCACACCATACAGGTATTCAAGGGCATaGTGGGCTCTGGCAAGAATG +
Preference number: 4 (lower is better)
Translates to: WTGIKQECIWQFLYITPYRYSRA*WALARM
Trigger: CATTCTTGCCAGAGCCCAGCATGCCCTTGAATACCT...GTATGGTGTGATATAAAGAAATTGCCATATGCATTCCTGCTTTATGCCAGTCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR GCA 90 bp GGGGCCATTTGCTCCCAACACTGTCCATTTAATTACAGGCAACTGTGTGTGTTTAAGAAACTATTCTGCTaGATGAGTTCATGTGCCTTG +
Preference number: 4 (lower is better)
Translates to: GAICSQHCPFNYRQLCVFKKLFC*MSSCAL
Trigger: CAAGGCACATGAACTCATGCAGCAGAATAGTTTCTT...AAACACACACAGTTGCCTGTAATTAAATGGACAGTGTTGGGAGCAAATGGCCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR CCA 90 bp GGGGCCATTTGCTCCCAACACTGTCCATTTAATTACAGGCAACTGTGTGTGTTTAATTCTCTCTGTGTCTaGGAGGTTCTTGAAAACGAA +
Preference number: 4 (lower is better)
Translates to: GAICSQHCPFNYRQLCVFNSLCV*EVLENE
Trigger: TTCGTTTTCAAGAACCTCCCAGACACAGAGAGAATT...AAACACACACAGTTGCCTGTAATTAAATGGACAGTGTTGGGAGCAAATGGCCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR CCA 90 bp CACTGTCCATTTAATTACAGGCAACTGTGTGTGTTTAAACCCAGGATATTAGGCTCAGACTGGACTTTCTaGGGATCCCAGACGATATTC +
Preference number: 4 (lower is better)
Translates to: HCPFNYRQLCVFKPRILGSDWTF*GSQTIF
Trigger: GAATATCGTCTGGGATCCCCAGAAAGTCCAGTCTGA...GCCTAATATCCTGGGTTTAAACACACACAGTTGCCTGTAATTAAATGGACAGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR CCA 90 bp GGGGCCATTTGCTCCCAACACTGTCCATTTAATTACAGGCAACTGTGTGTGTTTAAGTGTTGGACAAGATaGAACATACCATCCTCTCTA +
Preference number: 4 (lower is better)
Translates to: GAICSQHCPFNYRQLCVFKCWTR*NIPSSL
Trigger: TAGAGAGGATGGTATGTTCCATCTTGTCCAACACTT...AAACACACACAGTTGCCTGTAATTAAATGGACAGTGTTGGGAGCAAATGGCCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR CCA 90 bp GGGGCCATTTGCTCCCAACACTGTCCATTTAATTACAGGCAACTGTGTGTGTTTATGCTGGAATATCTGTaGAAACAGATGGTAGTCTCT +
Preference number: 4 (lower is better)
Translates to: GAICSQHCPFNYRQLCVFMLEYL*KQMVVS
Trigger: AGAGACTACCATCTGTTTCCACAGATATTCCAGCAT...AAACACACACAGTTGCCTGTAATTAAATGGACAGTGTTGGGAGCAAATGGCCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR CCA 90 bp ATAATCCTTCTAGAACTAAACTTTGCCTGGGGCCATTTGCTCCCAACACTGTCCTTGAATGGGAAATGTTaGCTTCTAAGATGCTGTGGA +
Preference number: 4 (lower is better)
Translates to: IILLELNFAWGHLLPTLSLNGKC*LLRCCG
Trigger: TCCACAGCATCTTAGAAGCCAACATTTCCCATTCAA...GGACAGTGTTGGGAGCAAATGGCCCCAGGCAAAGTTTAGTTCTAGAAGGATTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR CCA 90 bp TCCTCTTGGTTCCTGCACTTCTTAGTTTGGACTCTTGTCAGTTCATGGCTGAGTAACGTCAGCAGGAGATaGAGAATTTCTTCATCACAT +
Preference number: 4 (lower is better)
Translates to: SSWFLHFLVWTLVSSWLSNVSRR*RISSSH
Trigger: ATGTGATGAAGAAATTCTCCATCTCCTGCTGACGTT...ACTCAGCCATGAACTGACAAGAGTCCAAACTAAGAAGTGCAGGAACCAAGAGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR CCA 90 bp TCCTCTTGGTTCCTGCACTTCTTAGTTTGGACTCTTGTCAGTTCATGGCTGAGTCGAAAGCTGAACTTCTaGTTTGTCCCTTTGATGAAA +
Preference number: 4 (lower is better)
Translates to: SSWFLHFLVWTLVSSWLSRKLNF*FVPLMK
Trigger: TTTCATCAAAGGGACAAACCAGAAGTTCAGCTTTCG...ACTCAGCCATGAACTGACAAGAGTCCAAACTAAGAAGTGCAGGAACCAAGAGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR CCA 90 bp GGGGCCATTTGCTCCCAACACTGTCCATTTAATTACAGGCAACTGTGTGTGTTTTGTCCAGCTTCCACGTaGTTAAACATCTTATCTAAC +
Preference number: 4 (lower is better)
Translates to: GAICSQHCPFNYRQLCVFCPAST*LNILSN
Trigger: GTTAGATAAGATGTTTAACCACGTGGAAGCTGGACA...AAACACACACAGTTGCCTGTAATTAAATGGACAGTGTTGGGAGCAAATGGCCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR CCA 90 bp CACTGTCCATTTAATTACAGGCAACTGTGTGTGTTTAAACCCAGGATATTAGGCAGGTGTAAGTTTGAGTaGAGGGTACGTGATGGCCAA +
Preference number: 4 (lower is better)
Translates to: HCPFNYRQLCVFKPRILGRCKFE*RVRDGQ
Trigger: TTGGCCATCACGTACCCTCCACTCAAACTTACACCT...GCCTAATATCCTGGGTTTAAACACACACAGTTGCCTGTAATTAAATGGACAGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR CCA 90 bp TTTGAGATTCTATCCCTCAGAGATTATGCTGAGAACATGAGTTTCCACAAGGCTACCAGCGCTTTTATTTaGACACTTCAGGCAGCCACA +
Preference number: 4 (lower is better)
Translates to: FEILSLRDYAENMSFHKATSAFI*TLQAAT
Trigger: TGTGGCTGCCTGAAGTGTCCAAATAAAAGCGCTGGT...AGCCTTGTGGAAACTCATGTTCTCAGCATAATCTCTGAGGGATAGAATCTCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR CCA 90 bp CACTGTCCATTTAATTACAGGCAACTGTGTGTGTTTAAACCCAGGATATTAGGCTCCAGTCTACAGCATTaGCAGGTAAGTGATGCCACA +
Preference number: 4 (lower is better)
Translates to: HCPFNYRQLCVFKPRILGSSLQH*QVSDAT
Trigger: TGTGGCATCACTTACCTGCCAATGCTGTAGACTGGA...GCCTAATATCCTGGGTTTAAACACACACAGTTGCCTGTAATTAAATGGACAGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR CCA 90 bp TTTGAGATTCTATCCCTCAGAGATTATGCTGAGAACATGAGTTTCCACAAGGCTGTCTGCAGCAACCTCTaGGATGTACTGCTTTGGAAT +
Preference number: 4 (lower is better)
Translates to: FEILSLRDYAENMSFHKAVCSNL*DVLLWN
Trigger: ATTCCAAAGCAGTACATCCCAGAGGTTGCTGCAGAC...AGCCTTGTGGAAACTCATGTTCTCAGCATAATCTCTGAGGGATAGAATCTCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR CCA 90 bp TGGACTGGCATAAAGCAGGAATGCATATGGCAATTTCTTTATATCACACCATACCGCTGTCCCTTAAACTaGATTCCTGGGAAATGGAGC +
Preference number: 4 (lower is better)
Translates to: WTGIKQECIWQFLYITPYRCPLN*IPGKWS
Trigger: GCTCCATTTCCCAGGAATCCAGTTTAAGGGACAGCG...GTATGGTGTGATATAAAGAAATTGCCATATGCATTCCTGCTTTATGCCAGTCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR TCA 90 bp TTTGAGATTCTATCCCTCAGAGATTATGCTGAGAACATGAGTTTCCACAAGGCTTGTCTGGGAGGTTCTTaGAAACGAAGTACTGTCAGA +
Preference number: 4 (lower is better)
Translates to: FEILSLRDYAENMSFHKACLGGS*KRSTVR
Trigger: TCTGACAGTACTTCGTTTTCAAGAACCTCCCAGACA...AGCCTTGTGGAAACTCATGTTCTCAGCATAATCTCTGAGGGATAGAATCTCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR TCA 90 bp ATAATCCTTCTAGAACTAAACTTTGCCTGGGGCCATTTGCTCCCAACACTGTCCGATGTTTCTACAACTTaGGCCAGTATTACAAAGAAG +
Preference number: 4 (lower is better)
Translates to: IILLELNFAWGHLLPTLSDVSTT*ASITKK
Trigger: CTTCTTTGTAATACTGGCTCAAGTTGTAGAAACATC...GGACAGTGTTGGGAGCAAATGGCCCCAGGCAAAGTTTAGTTCTAGAAGGATTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR TCA 90 bp ATAATCCTTCTAGAACTAAACTTTGCCTGGGGCCATTTGCTCCCAACACTGTCCCATCCTCAGTCTTATTaGGATCCATTGTTAGAAAAC +
Preference number: 4 (lower is better)
Translates to: IILLELNFAWGHLLPTLSHPQSY*DPLLEN
Trigger: GTTTTCTAACAATGGATCTCAATAAGACTGAGGATG...GGACAGTGTTGGGAGCAAATGGCCCCAGGCAAAGTTTAGTTCTAGAAGGATTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR TCA 90 bp CACTGTCCATTTAATTACAGGCAACTGTGTGTGTTTAAACCCAGGATATTAGGCACCTCTCCAGGTAGCTaGGGAATTCTTGAACAAATC +
Preference number: 4 (lower is better)
Translates to: HCPFNYRQLCVFKPRILGTSPGS*GILEQI
Trigger: GATTTGTTCAAGAATTCCTCAGCTACCTGGAGAGGT...GCCTAATATCCTGGGTTTAAACACACACAGTTGCCTGTAATTAAATGGACAGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR TCA 90 bp TGGACTGGCATAAAGCAGGAATGCATATGGCAATTTCTTTATATCACACCATACCTTGTGGAATGCCATTaGGCCGGAATTCTTGCAGTT +
Preference number: 4 (lower is better)
Translates to: WTGIKQECIWQFLYITPYLVECH*AGILAV
Trigger: AACTGCAAGAATTCCGGCTCAATGGCATTCCACAAG...GTATGGTGTGATATAAAGAAATTGCCATATGCATTCCTGCTTTATGCCAGTCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR TCA 90 bp TATAATCCTTCTAGAACTAAACTTTGCCTGGGGCCATTTGCTCCCAACACTGTCAGACCCCTCGTTTCCTaGATAATTCACAGAAGAAAT +
Preference number: 4 (lower is better)
Translates to: YNPSRTKLCLGPFAPNTVRPLVS*IIHRRN
Trigger: ATTTCTTCTGTGAATTATTCAGGAAACGAGGGGTCT...GACAGTGTTGGGAGCAAATGGCCCCAGGCAAAGTTTAGTTCTAGAAGGATTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR TCA 90 bp TATAATCCTTCTAGAACTAAACTTTGCCTGGGGCCATTTGCTCCCAACACTGTCTTAGAAGTAAATCCTTaGAGTGCTTCCAGTTGGACT +
Preference number: 4 (lower is better)
Translates to: YNPSRTKLCLGPFAPNTVLEVNP*SASSWT
Trigger: AGTCCAACTGGAAGCACTTCAAGGATTTACTTCTAA...GACAGTGTTGGGAGCAAATGGCCCCAGGCAAAGTTTAGTTCTAGAAGGATTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR TCA 90 bp GCTATGTATAATCCTTCTAGAACTAAACTTTGCCTGGGGCCATTTGCTCCCAACTGCTGCCAAATATTCTaGAACTGGTCAGGAATATCA +
Preference number: 4 (lower is better)
Translates to: AMYNPSRTKLCLGPFAPNCCQIF*NWSGIS
Trigger: TGATATTCCTGACCAGTTTCAGAATATTTGGCAGCA...GTTGGGAGCAAATGGCCCCAGGCAAAGTTTAGTTCTAGAAGGATTATACATAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR TCA 90 bp CACTGTCCATTTAATTACAGGCAACTGTGTGTGTTTAAACCCAGGATATTAGGCCCTTCCCCAATGCTATaGTGTGCTGCCAAATATTCT +
Preference number: 4 (lower is better)
Translates to: HCPFNYRQLCVFKPRILGPSPML*CAAKYS
Trigger: AGAATATTTGGCAGCACATCATAGCATTGGGGAAGG...GCCTAATATCCTGGGTTTAAACACACACAGTTGCCTGTAATTAAATGGACAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR TCA 90 bp CACTGTCCATTTAATTACAGGCAACTGTGTGTGTTTAAACCCAGGATATTAGGCGGTTTTTCTCAAGCCTaGAAGTTGTGTAGTTTGCGC +
Preference number: 4 (lower is better)
Translates to: HCPFNYRQLCVFKPRILGGFSQA*KLCSLR
Trigger: GCGCAAACTACACAACTTTCAGGCTTGAGAAAAACC...GCCTAATATCCTGGGTTTAAACACACACAGTTGCCTGTAATTAAATGGACAGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR TCA 90 bp ATAATCCTTCTAGAACTAAACTTTGCCTGGGGCCATTTGCTCCCAACACTGTCCGATCTAGCATATGGCTaGAAAAGCCAACATCAAAAT +
Preference number: 4 (lower is better)
Translates to: IILLELNFAWGHLLPTLSDLAYG*KSQHQN
Trigger: ATTTTGATGTTGGCTTTTTCAGCCATATGCTAGATC...GGACAGTGTTGGGAGCAAATGGCCCCAGGCAAAGTTTAGTTCTAGAAGGATTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR TCA 90 bp TTTGAGATTCTATCCCTCAGAGATTATGCTGAGAACATGAGTTTCCACAAGGCTTGCAGAGTTCCCTTGTaGCAAACCAGGATTTTTCAC +
Preference number: 4 (lower is better)
Translates to: FEILSLRDYAENMSFHKACRVPL*QTRIFH
Trigger: GTGAAAAATCCTGGTTTGTCACAAGGGAACTCTGCA...AGCCTTGTGGAAACTCATGTTCTCAGCATAATCTCTGAGGGATAGAATCTCAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR TCA 90 bp TGGACTGGCATAAAGCAGGAATGCATATGGCAATTTCTTTATATCACACCATACTCCAAAGGCTGTGGTTaGAAGCAAGCACAGAAGAGT +
Preference number: 4 (lower is better)
Translates to: WTGIKQECIWQFLYITPYSKGCG*KQAQKS
Trigger: ACTCTTCTGTGCTTGCTTTCAACCACAGCCTTTGGA...GTATGGTGTGATATAAAGAAATTGCCATATGCATTCCTGCTTTATGCCAGTCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR TCA 90 bp CACTGTCCATTTAATTACAGGCAACTGTGTGTGTTTAAACCCAGGATATTAGGCTCTTTGACATGCCCATaGAAGCAATGCCAATGGAGA +
Preference number: 4 (lower is better)
Translates to: HCPFNYRQLCVFKPRILGSLTCP*KQCQWR
Trigger: TCTCCATTGGCATTGCTTTCATGGGCATGTCAAAGA...GCCTAATATCCTGGGTTTAAACACACACAGTTGCCTGTAATTAAATGGACAGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR TCA 90 bp TTTGAGATTCTATCCCTCAGAGATTATGCTGAGAACATGAGTTTCCACAAGGCTCAGAACCACTGTCTTTaGCATGCCCATGAAAGCAAT +
Preference number: 4 (lower is better)
Translates to: FEILSLRDYAENMSFHKAQNHCL*HAHESN
Trigger: ATTGCTTTCATGGGCATGTCAAAGACAGTGGTTCTG...AGCCTTGTGGAAACTCATGTTCTCAGCATAATCTCTGAGGGATAGAATCTCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR TCA 90 bp TGGACTGGCATAAAGCAGGAATGCATATGGCAATTTCTTTATATCACACCATACCATGGTTCCCACTGCTaGAGAAGTAAGTTTCTGCAG +
Preference number: 4 (lower is better)
Translates to: WTGIKQECIWQFLYITPYHGSHC*RSKFLQ
Trigger: CTGCAGAAACTTACTTCTTCAGCAGTGGGAACCATG...GTATGGTGTGATATAAAGAAATTGCCATATGCATTCCTGCTTTATGCCAGTCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR TCA 90 bp TTTGAGATTCTATCCCTCAGAGATTATGCTGAGAACATGAGTTTCCACAAGGCTAGTTCTCCCGAAATGTaGAAGCTGTTAACTGGAAGG +
Preference number: 4 (lower is better)
Translates to: FEILSLRDYAENMSFHKASSPEM*KLLTGR
Trigger: CCTTCCAGTTAACAGCTTTCACATTTCGGGAGAACT...AGCCTTGTGGAAACTCATGTTCTCAGCATAATCTCTGAGGGATAGAATCTCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR TCA 90 bp CACTGTCCATTTAATTACAGGCAACTGTGTGTGTTTAAACCCAGGATATTAGGCTGCACAAGCCAAAGATaGAGTTCAAGGAGATGTAGG +
Preference number: 4 (lower is better)
Translates to: HCPFNYRQLCVFKPRILGCTSQR*SSRRCR
Trigger: CCTACATCTCCTTGAACTTCATCTTTGGCTTGTGCA...GCCTAATATCCTGGGTTTAAACACACACAGTTGCCTGTAATTAAATGGACAGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR TCA 90 bp TATAATCCTTCTAGAACTAAACTTTGCCTGGGGCCATTTGCTCCCAACACTGTCTCAATGCCAAAGTTGTaGGTCAGATCATACTTGATC +
Preference number: 4 (lower is better)
Translates to: YNPSRTKLCLGPFAPNTVSMPKL*VRSYLI
Trigger: GATCAAGTATGATCTGACTCACAACTTTGGCATTGA...GACAGTGTTGGGAGCAAATGGCCCCAGGCAAAGTTTAGTTCTAGAAGGATTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR TCA 90 bp CACTGTCCATTTAATTACAGGCAACTGTGTGTGTTTAAACCCAGGATATTAGGCAGCATCAGTAGATGGTaGATCAACAGGAAAGCATGG +
Preference number: 4 (lower is better)
Translates to: HCPFNYRQLCVFKPRILGSISRW*INRKAW
Trigger: CCATGCTTTCCTGTTGATTCACCATCTACTGATGCT...GCCTAATATCCTGGGTTTAAACACACACAGTTGCCTGTAATTAAATGGACAGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR GCA 90 bp TTTGAGATTCTATCCCTCAGAGATTATGCTGAGAACATGAGTTTCCACAAGGCTAGCTCAGATGTATTCTaGAGAGCAGAGACAGTGTTC +
Preference number: 4 (lower is better)
Translates to: FEILSLRDYAENMSFHKASSDVF*RAETVF
Trigger: GAACACTGTCTCTGCTCTGCAGAATACATCTGAGCT...AGCCTTGTGGAAACTCATGTTCTCAGCATAATCTCTGAGGGATAGAATCTCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR GCA 90 bp TTTGAGATTCTATCCCTCAGAGATTATGCTGAGAACATGAGTTTCCACAAGGCTAGAGTTCTGGGATGCTaGCATTACCTTGAATTCCAG +
Preference number: 4 (lower is better)
Translates to: FEILSLRDYAENMSFHKARVLGC*HYLEFQ
Trigger: CTGGAATTCAAGGTAATGGCAGCATCCCAGAACTCT...AGCCTTGTGGAAACTCATGTTCTCAGCATAATCTCTGAGGGATAGAATCTCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR GCA 90 bp TTTGAGATTCTATCCCTCAGAGATTATGCTGAGAACATGAGTTTCCACAAGGCTGACAGAGTTCTGGGATaGTGCCATTACCTTGAATTC +
Preference number: 4 (lower is better)
Translates to: FEILSLRDYAENMSFHKADRVLG*CHYLEF
Trigger: GAATTCAAGGTAATGGCAGCATCCCAGAACTCTGTC...AGCCTTGTGGAAACTCATGTTCTCAGCATAATCTCTGAGGGATAGAATCTCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR GCA 90 bp TTCCTGCACTTCTTAGTTTGGACTCTTGTCAGTTCATGGCTGAGTCTGTCACAGGGTGTTTTGAAGACCTaGACCTTGGATATTTTTGTT +
Preference number: 4 (lower is better)
Translates to: FLHFLVWTLVSSWLSLSQGVLKT*TLDIFV
Trigger: AACAAAAATATCCAAGGTGCAGGTCTTCAAAACACC...CTGTGACAGACTCAGCCATGAACTGACAAGAGTCCAAACTAAGAAGTGCAGGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR GCA 90 bp TTTGAGATTCTATCCCTCAGAGATTATGCTGAGAACATGAGTTTCCACAAGGCTAGAGTTTTGTTGACTTaGTGCTGTAGCTCCTTCGTG +
Preference number: 4 (lower is better)
Translates to: FEILSLRDYAENMSFHKARVLLT*CCSSFV
Trigger: CACGAAGGAGCTACAGCAGCAAGTCAACAAAACTCT...AGCCTTGTGGAAACTCATGTTCTCAGCATAATCTCTGAGGGATAGAATCTCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR GCA 90 bp TGGACTGGCATAAAGCAGGAATGCATATGGCAATTTCTTTATATCACACCATACGAAGCAGGTTCTGTCTaGATCCTTGGGGATGGTATA +
Preference number: 4 (lower is better)
Translates to: WTGIKQECIWQFLYITPYEAGSV*ILGDGI
Trigger: TATACCATCCCCAAGGATGCAGACAGAACCTGCTTC...GTATGGTGTGATATAAAGAAATTGCCATATGCATTCCTGCTTTATGCCAGTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR GCA 90 bp TGGACTGGCATAAAGCAGGAATGCATATGGCAATTTCTTTATATCACACCATACAGAGGAGAAGAAATGTaGCCTGCAAGGTCAACTCCA +
Preference number: 4 (lower is better)
Translates to: WTGIKQECIWQFLYITPYRGEEM*PARSTP
Trigger: TGGAGTTGACCTTGCAGGGCACATTTCTTCTCCTCT...GTATGGTGTGATATAAAGAAATTGCCATATGCATTCCTGCTTTATGCCAGTCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR CCA 90 bp TTTGAGATTCTATCCCTCAGAGATTATGCTGAGAACATGAGTTTCCACAAGGCTTGTGAGATACCACTATaGAGACAAGCTGGCTTTCAC +
Preference number: 4 (lower is better)
Translates to: FEILSLRDYAENMSFHKACEIPL*RQAGFH
Trigger: GTGAAAGCCAGCTTGTCTCCATAGTGGTATCTCACA...AGCCTTGTGGAAACTCATGTTCTCAGCATAATCTCTGAGGGATAGAATCTCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR CCA 90 bp TGGACTGGCATAAAGCAGGAATGCATATGGCAATTTCTTTATATCACACCATACGAAGGCATGTGCCTCTaGATATTACAGTCTTCGACC +
Preference number: 4 (lower is better)
Translates to: WTGIKQECIWQFLYITPYEGMCL*ILQSST
Trigger: GGTCGAAGACTGTAATATCCAGAGGCACATGCCTTC...GTATGGTGTGATATAAAGAAATTGCCATATGCATTCCTGCTTTATGCCAGTCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR CCA 90 bp TGGACTGGCATAAAGCAGGAATGCATATGGCAATTTCTTTATATCACACCATACGAGGAAGTTGCACAGTaGTGTTTTGAAGACCTGCAC +
Preference number: 4 (lower is better)
Translates to: WTGIKQECIWQFLYITPYEEVAQ*CFEDLH
Trigger: GTGCAGGTCTTCAAAACACCACTGTGCAACTTCCTC...GTATGGTGTGATATAAAGAAATTGCCATATGCATTCCTGCTTTATGCCAGTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR CCA 90 bp TGGACTGGCATAAAGCAGGAATGCATATGGCAATTTCTTTATATCACACCATACTCTTCACAGTTTTCATaGGCTTCTGCAGCTGCTGGA +
Preference number: 4 (lower is better)
Translates to: WTGIKQECIWQFLYITPYSSQFS*ASAAAG
Trigger: TCCAGCAGCTGCAGAAGCCCATGAAAACTGTGAAGA...GTATGGTGTGATATAAAGAAATTGCCATATGCATTCCTGCTTTATGCCAGTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR CCA 90 bp ATAATCCTTCTAGAACTAAACTTTGCCTGGGGCCATTTGCTCCCAACACTGTCCCAACATCATAATCAGTaGGAAAAAGAAGCCGACATT +
Preference number: 4 (lower is better)
Translates to: IILLELNFAWGHLLPTLSQHHNQ*EKEADI
Trigger: AATGTCGGCTTCTTTTTCCCACTGATTATGATGTTG...GGACAGTGTTGGGAGCAAATGGCCCCAGGCAAAGTTTAGTTCTAGAAGGATTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR CCA 90 bp CATAGTCTGTGGGATTCTAAGCGTGTTATAAATGACAAACATCTTCAATTTTGCCAGGAAGTGGATGGTTaGATGCAGTCCCATCATCCG +
Preference number: 4 (lower is better)
Translates to: HSLWDSKRVINDKHLQFCQEVDG*MQSHHP
Trigger: CGGATGATGGGACTGCATCCAACCATCCACTTCCTG...GCAAAATTGAAGATGTTTGTCATTTATAACACGCTTAGAATCCCACAGACTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR CCA 90 bp TTTGAGATTCTATCCCTCAGAGATTATGCTGAGAACATGAGTTTCCACAAGGCTGCTTCATCCAGGTGGTaGGTTGTGAAGATAATTGTG +
Preference number: 4 (lower is better)
Translates to: FEILSLRDYAENMSFHKAASSRW*VVKIIV
Trigger: CACAATTATCTTCACAACCCACCACCTGGATGAAGC...AGCCTTGTGGAAACTCATGTTCTCAGCATAATCTCTGAGGGATAGAATCTCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR CCA 90 bp CATAGTCTGTGGGATTCTAAGCGTGTTATAAATGACAAACATCTTCAATTTTGCTGGAGAACAGCCACGTaGTCACTGAGCATCTCAGCT +
Preference number: 4 (lower is better)
Translates to: HSLWDSKRVINDKHLQFCWRTAT*SLSISA
Trigger: AGCTGAGATGCTCAGTGACCACGTGGCTGTTCTCCA...GCAAAATTGAAGATGTTTGTCATTTATAACACGCTTAGAATCCCACAGACTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR CCA 90 bp GCTATGTATAATCCTTCTAGAACTAAACTTTGCCTGGGGCCATTTGCTCCCAACCATCTTCAGCATCATTaGGTATTTGTCCTCCAAAAG +
Preference number: 4 (lower is better)
Translates to: AMYNPSRTKLCLGPFAPNHLQHH*VFVLQK
Trigger: CTTTTGGAGGACAAATACCCAATGATGCTGAAGATG...GTTGGGAGCAAATGGCCCCAGGCAAAGTTTAGTTCTAGAAGGATTATACATAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR CCA 90 bp CATAGTCTGTGGGATTCTAAGCGTGTTATAAATGACAAACATCTTCAATTTTGCGCCCCTCCATATGGGTaGCTGTACAGGGTTATTCCA +
Preference number: 4 (lower is better)
Translates to: HSLWDSKRVINDKHLQFCAPPYG*LYRVIP
Trigger: TGGAATAACCCTGTACAGCCACCCATATGGAGGGGC...GCAAAATTGAAGATGTTTGTCATTTATAACACGCTTAGAATCCCACAGACTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR CCA 90 bp CATAGTCTGTGGGATTCTAAGCGTGTTATAAATGACAAACATCTTCAATTTTGCCAAGGCCCCTCCATATaGGTGGCTGTACAGGGTTAT +
Preference number: 4 (lower is better)
Translates to: HSLWDSKRVINDKHLQFCQGPSI*VAVQGY
Trigger: ATAACCCTGTACAGCCACCCATATGGAGGGGCCTTG...GCAAAATTGAAGATGTTTGTCATTTATAACACGCTTAGAATCCCACAGACTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR CCA 90 bp CACTGTCCATTTAATTACAGGCAACTGTGTGTGTTTAAACCCAGGATATTAGGCTGGATTCCTGGGAAATaGAGCTTCAAGCAGTCAGAA +
Preference number: 4 (lower is better)
Translates to: HCPFNYRQLCVFKPRILGWIPGK*SFKQSE
Trigger: TTCTGACTGCTTGAAGCTCCATTTCCCAGGAATCCA...GCCTAATATCCTGGGTTTAAACACACACAGTTGCCTGTAATTAAATGGACAGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR TCA 90 bp TATAATCCTTCTAGAACTAAACTTTGCCTGGGGCCATTTGCTCCCAACACTGTCTCAAGCTTAAATATTTaGGCAATGCTTCTCCAGATC +
Preference number: 4 (lower is better)
Translates to: YNPSRTKLCLGPFAPNTVSSLNI*AMLLQI
Trigger: GATCTGGAGAAGCATTGCTCAAATATTTAAGCTTGA...GACAGTGTTGGGAGCAAATGGCCCCAGGCAAAGTTTAGTTCTAGAAGGATTATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR TCA 90 bp CACTGTCCATTTAATTACAGGCAACTGTGTGTGTTTAAACCCAGGATATTAGGCACTGGGAAGCAACATTaGGATCTTCTGTTAAGTTGG +
Preference number: 4 (lower is better)
Translates to: HCPFNYRQLCVFKPRILGTGKQH*DLLLSW
Trigger: CCAACTTAACAGAAGATCTCAATGTTGCTTCCCAGT...GCCTAATATCCTGGGTTTAAACACACACAGTTGCCTGTAATTAAATGGACAGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR TCA 90 bp TTTGAGATTCTATCCCTCAGAGATTATGCTGAGAACATGAGTTTCCACAAGGCTGAGGGAATGAACTGTTaGCATCAGAAAACAAGTCAC +
Preference number: 4 (lower is better)
Translates to: FEILSLRDYAENMSFHKAEGMNC*HQKTSH
Trigger: GTGACTTGTTTTCTGATGTCAACAGTTCATTCCCTC...AGCCTTGTGGAAACTCATGTTCTCAGCATAATCTCTGAGGGATAGAATCTCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR TCA 90 bp GCTATGTATAATCCTTCTAGAACTAAACTTTGCCTGGGGCCATTTGCTCCCAACATTCTGATGAGGGGTTaGATTAGGAAAACTGTTGTA +
Preference number: 4 (lower is better)
Translates to: AMYNPSRTKLCLGPFAPNILMRG*IRKTVV
Trigger: TACAACAGTTTTCCTAATTCAACCCCTCATCAGAAT...GTTGGGAGCAAATGGCCCCAGGCAAAGTTTAGTTCTAGAAGGATTATACATAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR TCA 90 bp GCTATGTATAATCCTTCTAGAACTAAACTTTGCCTGGGGCCATTTGCTCCCAACAGTCATGCGGAATGTTaGACTTCTCTTTGTTATCTT +
Preference number: 4 (lower is better)
Translates to: AMYNPSRTKLCLGPFAPNSHAEC*TSLCYL
Trigger: AAGATAACAAAGAGAAGTTCAACATTCCGCATGACT...GTTGGGAGCAAATGGCCCCAGGCAAAGTTTAGTTCTAGAAGGATTATACATAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR TCA 90 bp CATAGTCTGTGGGATTCTAAGCGTGTTATAAATGACAAACATCTTCAATTTTGCTGGGCCATTTTGCTGTaGGAGCCCTTTGTTGCCAAA +
Preference number: 4 (lower is better)
Translates to: HSLWDSKRVINDKHLQFCWAILL*EPFVAK
Trigger: TTTGGCAACAAAGGGCTCTCACAGCAAAATGGCCCA...GCAAAATTGAAGATGTTTGTCATTTATAACACGCTTAGAATCCCACAGACTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR GCA 90 bp CATAGTCTGTGGGATTCTAAGCGTGTTATAAATGACAAACATCTTCAATTTTGCCTGGATGCCGGAGTCTaGAAATCCAGTTCTTCCAGA +
Preference number: 4 (lower is better)
Translates to: HSLWDSKRVINDKHLQFCLDAGV*KSSSSR
Trigger: TCTGGAAGAACTGGATTTGCAGACTCCGGCATCCAG...GCAAAATTGAAGATGTTTGTCATTTATAACACGCTTAGAATCCCACAGACTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR GCA 90 bp CATAGTCTGTGGGATTCTAAGCGTGTTATAAATGACAAACATCTTCAATTTTGCTCTGACAGGGCATGCTaGAACTTGCTTAGATGCTGG +
Preference number: 4 (lower is better)
Translates to: HSLWDSKRVINDKHLQFCSDRAC*NLLRCW
Trigger: CCAGCATCTAAGCAAGTTGCAGCATGCCCTGTCAGA...GCAAAATTGAAGATGTTTGTCATTTATAACACGCTTAGAATCCCACAGACTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR GCA 90 bp TGGACTGGCATAAAGCAGGAATGCATATGGCAATTTCTTTATATCACACCATACGCAGTGACATCGCTATaGAATCCATTTATCACGGAG +
Preference number: 4 (lower is better)
Translates to: WTGIKQECIWQFLYITPYAVTSL*NPFITE
Trigger: CTCCGTGATAAATGGATTGCATAGCGATGTCACTGC...GTATGGTGTGATATAAAGAAATTGCCATATGCATTCCTGCTTTATGCCAGTCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR GCA 90 bp GGGGCCATTTGCTCCCAACACTGTCCATTTAATTACAGGCAACTGTGTGTGTTTCCTATTTTTAATCATTaGCACAAAATGCTCCCAATC +
Preference number: 4 (lower is better)
Translates to: GAICSQHCPFNYRQLCVFPIFNH*HKMLPI
Trigger: GATTGGGAGCATTTTGTGGCAATGATTAAAAATAGG...AAACACACACAGTTGCCTGTAATTAAATGGACAGTGTTGGGAGCAAATGGCCCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR GCA 90 bp CATAGTCTGTGGGATTCTAAGCGTGTTATAAATGACAAACATCTTCAATTTTGCAGAGCTTCCTCTTCATaGCTCCAGAGAGAACTCCAG +
Preference number: 4 (lower is better)
Translates to: HSLWDSKRVINDKHLQFCRASSS*LQRELQ
Trigger: CTGGAGTTCTCTCTGGAGGCATGAAGAGGAAGCTCT...GCAAAATTGAAGATGTTTGTCATTTATAACACGCTTAGAATCCCACAGACTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR GCA 90 bp GGGGCCATTTGCTCCCAACACTGTCCATTTAATTACAGGCAACTGTGTGTGTTTTTTTTGTTGGTATCTTaGAGAAGCATCAAAAACACC +
Preference number: 4 (lower is better)
Translates to: GAICSQHCPFNYRQLCVFFLLVS*RSIKNT
Trigger: GGTGTTTTTGATGCTTCTGCAAGATACCAACAAAAA...AAACACACACAGTTGCCTGTAATTAAATGGACAGTGTTGGGAGCAAATGGCCCC
41% GC, longest homopolymer 8 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR GCA 90 bp TTCCTGCACTTCTTAGTTTGGACTCTTGTCAGTTCATGGCTGAGTCTGTCACAGTCACATAAGAATCAATaGCAAAGTTGTGAGTCAGAT +
Preference number: 4 (lower is better)
Translates to: FLHFLVWTLVSSWLSLSQSHKNQ*QSCESD
Trigger: ATCTGACTCACAACTTTGGCATTGATTCTTATGTGA...CTGTGACAGACTCAGCCATGAACTGACAAGAGTCCAAACTAAGAAGTGCAGGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR CCA 90 bp CATAGTCTGTGGGATTCTAAGCGTGTTATAAATGACAAACATCTTCAATTTTGCACTATGGAGACAAGCTaGCTTTCACAGCCACCAGGA +
Preference number: 4 (lower is better)
Translates to: HSLWDSKRVINDKHLQFCTMETS*LSQPPG
Trigger: TCCTGGTGGCTGTGAAAGCCAGCTTGTCTCCATAGT...GCAAAATTGAAGATGTTTGTCATTTATAACACGCTTAGAATCCCACAGACTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR CCA 90 bp CATAGTCTGTGGGATTCTAAGCGTGTTATAAATGACAAACATCTTCAATTTTGCGGAAATGTCTTCAGCTaGTGCAGGGAGGTTTCCATG +
Preference number: 4 (lower is better)
Translates to: HSLWDSKRVINDKHLQFCGNVFS*CREVSM
Trigger: CATGGAAACCTCCCTGCACCAGCTGAAGACATTTCC...GCAAAATTGAAGATGTTTGTCATTTATAACACGCTTAGAATCCCACAGACTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR CCA 90 bp CACTGTCCATTTAATTACAGGCAACTGTGTGTGTTTAAACCCAGGATATTAGGCCTTTCTTCACCAACCTaGGAAATAGTGCCAAATAGC +
Preference number: 4 (lower is better)
Translates to: HCPFNYRQLCVFKPRILGLSSPT*EIVPNS
Trigger: GCTATTTGGCACTATTTCCCAGGTTGGTGAAGAAAG...GCCTAATATCCTGGGTTTAAACACACACAGTTGCCTGTAATTAAATGGACAGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR CCA 90 bp TGGACTGGCATAAAGCAGGAATGCATATGGCAATTTCTTTATATCACACCATACTTTGATGAAACCTGTTaGAAGTCTGGCATGTCCAGC +
Preference number: 4 (lower is better)
Translates to: WTGIKQECIWQFLYITPYFDETC*KSGMSS
Trigger: GCTGGACATGCCAGACTTCCAACAGGTTTCATCAAA...GTATGGTGTGATATAAAGAAATTGCCATATGCATTCCTGCTTTATGCCAGTCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR TCA 90 bp CACTGTCCATTTAATTACAGGCAACTGTGTGTGTTTAAACCCAGGATATTAGGCAACCAAATTGGGATTTaGGATCAGACTGGACTTTCT +
Preference number: 4 (lower is better)
Translates to: HCPFNYRQLCVFKPRILGNQIGI*DQTGLS
Trigger: AGAAAGTCCAGTCTGATCTCAAATCCCAATTTGGTT...GCCTAATATCCTGGGTTTAAACACACACAGTTGCCTGTAATTAAATGGACAGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR TCA 90 bp CATAGTCTGTGGGATTCTAAGCGTGTTATAAATGACAAACATCTTCAATTTTGCAGACTGGTCACCATGTaGAAGAAGGATGAAGGCATG +
Preference number: 4 (lower is better)
Translates to: HSLWDSKRVINDKHLQFCRLVTM*KKDEGM
Trigger: CATGCCTTCATCCTTCTTTCACATGGTGACCAGTCT...GCAAAATTGAAGATGTTTGTCATTTATAACACGCTTAGAATCCCACAGACTATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR TCA 90 bp CATAGTCTGTGGGATTCTAAGCGTGTTATAAATGACAAACATCTTCAATTTTGCCCAGAGTGGTCTGGCTaGTGGAGTAATGCTCAATAT +
Preference number: 4 (lower is better)
Translates to: HSLWDSKRVINDKHLQFCPEWSG*WSNAQY
Trigger: ATATTGAGCATTACTCCATCAGCCAGACCACTCTGG...GCAAAATTGAAGATGTTTGTCATTTATAACACGCTTAGAATCCCACAGACTATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR GCA 90 bp GCTATGTATAATCCTTCTAGAACTAAACTTTGCCTGGGGCCATTTGCTCCCAACCTACCCTGTGACACATaGCTAAGAAATAATATTGTT +
Preference number: 4 (lower is better)
Translates to: AMYNPSRTKLCLGPFAPNLPCDT*LRNNIV
Trigger: AACAATATTATTTCTTAGGCATGTGTCACAGGGTAG...GTTGGGAGCAAATGGCCCCAGGCAAAGTTTAGTTCTAGAAGGATTATACATAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR GCA 90 bp GCTATGTATAATCCTTCTAGAACTAAACTTTGCCTGGGGCCATTTGCTCCCAACTTATGCCAAAATCCCTaGAGAGTTTTCACAAGTAAA +
Preference number: 4 (lower is better)
Translates to: AMYNPSRTKLCLGPFAPNLCQNP*RVFTSK
Trigger: TTTACTTGTGAAAACTCTGCAGGGATTTTGGCATAA...GTTGGGAGCAAATGGCCCCAGGCAAAGTTTAGTTCTAGAAGGATTATACATAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR GCA 90 bp CACTGTCCATTTAATTACAGGCAACTGTGTGTGTTTAAACCCAGGATATTAGGCCTGAATTCATCACAATaGTTTCAAGAAGCCGCTGAA +
Preference number: 4 (lower is better)
Translates to: HCPFNYRQLCVFKPRILGLNSSQ*FQEAAE
Trigger: TTCAGCGGCTTCTTGAAAGCATTGTGATGAATTCAG...GCCTAATATCCTGGGTTTAAACACACACAGTTGCCTGTAATTAAATGGACAGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR GCA 90 bp TTTGAGATTCTATCCCTCAGAGATTATGCTGAGAACATGAGTTTCCACAAGGCTATCATTTCCACTCTCTaGAGCATCTTCACAGTTTTC +
Preference number: 4 (lower is better)
Translates to: FEILSLRDYAENMSFHKAIISTL*SIFTVF
Trigger: GAAAACTGTGAAGATGCTGCAGAGAGTGGAAATGAT...AGCCTTGTGGAAACTCATGTTCTCAGCATAATCTCTGAGGGATAGAATCTCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR GCA 90 bp CACTGTCCATTTAATTACAGGCAACTGTGTGTGTTTAAACCCAGGATATTAGGCAATGGTGTTGAGTCATaGGGAATGTTGAACTTCTCT +
Preference number: 4 (lower is better)
Translates to: HCPFNYRQLCVFKPRILGNGVES*GMLNFS
Trigger: AGAGAAGTTCAACATTCCGCATGACTCAACACCATT...GCCTAATATCCTGGGTTTAAACACACACAGTTGCCTGTAATTAAATGGACAGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR CCA 90 bp CATAGTCTGTGGGATTCTAAGCGTGTTATAAATGACAAACATCTTCAATTTTGCGATTTGAGATCAGACTaGACTTTCTGGGGATCCCAG +
Preference number: 4 (lower is better)
Translates to: HSLWDSKRVINDKHLQFCDLRSD*TFWGSQ
Trigger: CTGGGATCCCCAGAAAGTCCAGTCTGATCTCAAATC...GCAAAATTGAAGATGTTTGTCATTTATAACACGCTTAGAATCCCACAGACTATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR CCA 90 bp GCTATGTATAATCCTTCTAGAACTAAACTTTGCCTGGGGCCATTTGCTCCCAACAAAGTTTTCTCTACTTaGTCCAGGTTAAGTGATTGT +
Preference number: 4 (lower is better)
Translates to: AMYNPSRTKLCLGPFAPNKVFST*SRLSDC
Trigger: ACAATCACTTAACCTGGACCAAGTAGAGAAAACTTT...GTTGGGAGCAAATGGCCCCAGGCAAAGTTTAGTTCTAGAAGGATTATACATAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR CCA 90 bp CATAGTCTGTGGGATTCTAAGCGTGTTATAAATGACAAACATCTTCAATTTTGCAGTAGGACAGAGTTCTaGGATGCTGCCATTACCTTG +
Preference number: 4 (lower is better)
Translates to: HSLWDSKRVINDKHLQFCSRTEF*DAAITL
Trigger: CAAGGTAATGGCAGCATCCCAGAACTCTGTCCTACT...GCAAAATTGAAGATGTTTGTCATTTATAACACGCTTAGAATCCCACAGACTATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR CCA 90 bp GCTATGTATAATCCTTCTAGAACTAAACTTTGCCTGGGGCCATTTGCTCCCAACGAAAATGTTCATCAATaGGTTTTTGTTCATCCAGGT +
Preference number: 4 (lower is better)
Translates to: AMYNPSRTKLCLGPFAPNENVHQ*VFVHPG
Trigger: ACCTGGATGAACAAAAACCCATTGATGAACATTTTC...GTTGGGAGCAAATGGCCCCAGGCAAAGTTTAGTTCTAGAAGGATTATACATAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR CCA 90 bp TTTGAGATTCTATCCCTCAGAGATTATGCTGAGAACATGAGTTTCCACAAGGCTCCATTTCCACTTCCCTaGAAAAGTTTGGATATCTTC +
Preference number: 4 (lower is better)
Translates to: FEILSLRDYAENMSFHKAPFPLP*KSLDIF
Trigger: GAAGATATCCAAACTTTTCCAGGGAAGTGGAAATGG...AGCCTTGTGGAAACTCATGTTCTCAGCATAATCTCTGAGGGATAGAATCTCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR TCA 90 bp CACTGTCCATTTAATTACAGGCAACTGTGTGTGTTTAAACCCAGGATATTAGGCAAGGCTTTCCAATTTTaGTATCACATCCTCAGTCTT +
Preference number: 4 (lower is better)
Translates to: HCPFNYRQLCVFKPRILGKAFQF*YHILSL
Trigger: AAGACTGAGGATGTGATATCAAAATTGGAAAGCCTT...GCCTAATATCCTGGGTTTAAACACACACAGTTGCCTGTAATTAAATGGACAGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR TCA 90 bp TTTGAGATTCTATCCCTCAGAGATTATGCTGAGAACATGAGTTTCCACAAGGCTCAAAAATCAACTCAGTaGGTCTCTGGAAAATATCAG +
Preference number: 4 (lower is better)
Translates to: FEILSLRDYAENMSFHKAQKSTQ*VSGKYQ
Trigger: CTGATATTTTCCAGAGACTCACTGAGTTGATTTTTG...AGCCTTGTGGAAACTCATGTTCTCAGCATAATCTCTGAGGGATAGAATCTCAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR TCA 90 bp TTTGAGATTCTATCCCTCAGAGATTATGCTGAGAACATGAGTTTCCACAAGGCTTGCAAAGCTACTAACTaGATTCATCACAATGCTTTC +
Preference number: 4 (lower is better)
Translates to: FEILSLRDYAENMSFHKACKATN*IHHNAF
Trigger: GAAAGCATTGTGATGAATTCAGTTAGTAGCTTTGCA...AGCCTTGTGGAAACTCATGTTCTCAGCATAATCTCTGAGGGATAGAATCTCAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR TCA 90 bp TGGACTGGCATAAAGCAGGAATGCATATGGCAATTTCTTTATATCACACCATACAAAGAGCTTGTAAGGTaGGGTCAATCACCATTTTCA +
Preference number: 4 (lower is better)
Translates to: WTGIKQECIWQFLYITPYKELVR*GQSPFS
Trigger: TGAAAATGGTGATTGACCTCACCTTACAAGCTCTTT...GTATGGTGTGATATAAAGAAATTGCCATATGCATTCCTGCTTTATGCCAGTCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR TCA 90 bp CATAGTCTGTGGGATTCTAAGCGTGTTATAAATGACAAACATCTTCAATTTTGCAACTATTCTGCTGCATaGGTTCATGTGCCTTGGTCT +
Preference number: 4 (lower is better)
Translates to: HSLWDSKRVINDKHLQFCNYSAA*VHVPWS
Trigger: AGACCAAGGCACATGAACTCATGCAGCAGAATAGTT...GCAAAATTGAAGATGTTTGTCATTTATAACACGCTTAGAATCCCACAGACTATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR GCA 90 bp TTTGAGATTCTATCCCTCAGAGATTATGCTGAGAACATGAGTTTCCACAAGGCTTTGAGCCGGAATTCTTaGAGTTCTGAATTCATTTCA +
Preference number: 4 (lower is better)
Translates to: FEILSLRDYAENMSFHKALSRNS*SSEFIS
Trigger: TGAAATGAATTCAGAACTGCAAGAATTCCGGCTCAA...AGCCTTGTGGAAACTCATGTTCTCAGCATAATCTCTGAGGGATAGAATCTCAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR GCA 90 bp TGGACTGGCATAAAGCAGGAATGCATATGGCAATTTCTTTATATCACACCATACCTCCTTGATGATGCTTaGAAATTTGGCTTGATGATC +
Preference number: 4 (lower is better)
Translates to: WTGIKQECIWQFLYITPYLLDDA*KFGLMI
Trigger: GATCATCAAGCCAAATTTGCAAGCATCATCAAGGAG...GTATGGTGTGATATAAAGAAATTGCCATATGCATTCCTGCTTTATGCCAGTCCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR GCA 90 bp CACTGTCCATTTAATTACAGGCAACTGTGTGTGTTTAAACCCAGGATATTAGGCATTTGCAAAGCACCTTaGTTTATGGTACTAGTAGGA +
Preference number: 4 (lower is better)
Translates to: HCPFNYRQLCVFKPRILGICKAP*FMVLVG
Trigger: TCCTACTAGTACCATAAAGCAAGGTGCTTTGCAAAT...GCCTAATATCCTGGGTTTAAACACACACAGTTGCCTGTAATTAAATGGACAGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR GCA 90 bp TGGACTGGCATAAAGCAGGAATGCATATGGCAATTTCTTTATATCACACCATACTCAAGCACCCTCATTTaGTCTGTTTCAACATCTATG +
Preference number: 4 (lower is better)
Translates to: WTGIKQECIWQFLYITPYSSTLI*SVSTSM
Trigger: CATAGATGTTGAAACAGAGCAAATGAGGGTGCTTGA...GTATGGTGTGATATAAAGAAATTGCCATATGCATTCCTGCTTTATGCCAGTCCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR CCA 90 bp TTTGAGATTCTATCCCTCAGAGATTATGCTGAGAACATGAGTTTCCACAAGGCTTCATTGAAACCAAATTaGGATTTGAGATCAGACTGG +
Preference number: 4 (lower is better)
Translates to: FEILSLRDYAENMSFHKASLKPN*DLRSDW
Trigger: CCAGTCTGATCTCAAATCCCAATTTGGTTTCAATGA...AGCCTTGTGGAAACTCATGTTCTCAGCATAATCTCTGAGGGATAGAATCTCAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR CCA 90 bp TTTGAGATTCTATCCCTCAGAGATTATGCTGAGAACATGAGTTTCCACAAGGCTAACTTGCTTAGATGCTaGAATATCTGTGGAAACAGA +
Preference number: 4 (lower is better)
Translates to: FEILSLRDYAENMSFHKANLLRC*NICGNR
Trigger: TCTGTTTCCACAGATATTCCAGCATCTAAGCAAGTT...AGCCTTGTGGAAACTCATGTTCTCAGCATAATCTCTGAGGGATAGAATCTCAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR CCA 90 bp CATAGTCTGTGGGATTCTAAGCGTGTTATAAATGACAAACATCTTCAATTTTGCTGCTTCCAGTTGGACTaGGAAGCAACATTGAGATCT +
Preference number: 4 (lower is better)
Translates to: HSLWDSKRVINDKHLQFCCFQLD*EATLRS
Trigger: AGATCTCAATGTTGCTTCCCAGTCCAACTGGAAGCA...GCAAAATTGAAGATGTTTGTCATTTATAACACGCTTAGAATCCCACAGACTATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR CCA 90 bp CACTGTCCATTTAATTACAGGCAACTGTGTGTGTTTAAACCCAGGATATTAGGCTATATCTCCTTCCTTTaGACTGGTAGAGAATACACT +
Preference number: 4 (lower is better)
Translates to: HCPFNYRQLCVFKPRILGYISFL*TGREYT
Trigger: AGTGTATTCTCTACCAGTCCAAAGGAAGGAGATATA...GCCTAATATCCTGGGTTTAAACACACACAGTTGCCTGTAATTAAATGGACAGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR CCA 90 bp CATAGTCTGTGGGATTCTAAGCGTGTTATAAATGACAAACATCTTCAATTTTGCGTGAAAGCTGTTAACTaGAAGGCTCCTATAACAGCG +
Preference number: 4 (lower is better)
Translates to: HSLWDSKRVINDKHLQFCVKAVN*KAPITA
Trigger: CGCTGTTATAGGAGCCTTCCAGTTAACAGCTTTCAC...GCAAAATTGAAGATGTTTGTCATTTATAACACGCTTAGAATCCCACAGACTATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR TCA 90 bp CATAGTCTGTGGGATTCTAAGCGTGTTATAAATGACAAACATCTTCAATTTTGCGTCCAACTGATCAGGTaGGAACCATATCTTTCCAAT +
Preference number: 4 (lower is better)
Translates to: HSLWDSKRVINDKHLQFCVQLIR*EPYLSN
Trigger: ATTGGAAAGATATGGTTCTCACCTGATCAGTTGGAC...GCAAAATTGAAGATGTTTGTCATTTATAACACGCTTAGAATCCCACAGACTATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR GCA 90 bp CATAGTCTGTGGGATTCTAAGCGTGTTATAAATGACAAACATCTTCAATTTTGCCTTCAGCCAACTGACTaGATGGATGATGTAGTTCTT +
Preference number: 4 (lower is better)
Translates to: HSLWDSKRVINDKHLQFCLQPTD*MDDVVL
Trigger: AAGAACTACATCATCCATGCAGTCAGTTGGCTGAAG...GCAAAATTGAAGATGTTTGTCATTTATAACACGCTTAGAATCCCACAGACTATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR GCA 90 bp CATAGTCTGTGGGATTCTAAGCGTGTTATAAATGACAAACATCTTCAATTTTGCCCATCAGACCACATATaGTCTTCCAATATGATGCAG +
Preference number: 4 (lower is better)
Translates to: HSLWDSKRVINDKHLQFCPSDHI*SSNMMQ
Trigger: CTGCATCATATTGGAAGAGCATATGTGGTCTGATGG...GCAAAATTGAAGATGTTTGTCATTTATAACACGCTTAGAATCCCACAGACTATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR CCA 90 bp CATAGTCTGTGGGATTCTAAGCGTGTTATAAATGACAAACATCTTCAATTTTGCCATCCTCAGAAGTGTTaGACAAGATGGAACATACCA +
Preference number: 4 (lower is better)
Translates to: HSLWDSKRVINDKHLQFCHPQKC*TRWNIP
Trigger: TGGTATGTTCCATCTTGTCCAACACTTCTGAGGATG...GCAAAATTGAAGATGTTTGTCATTTATAACACGCTTAGAATCCCACAGACTATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR CCA 90 bp TTTGAGATTCTATCCCTCAGAGATTATGCTGAGAACATGAGTTTCCACAAGGCTCATTCCATGGACAAATaGGTCTTTTCTTATTTAGCA +
Preference number: 4 (lower is better)
Translates to: FEILSLRDYAENMSFHKAHSMDK*VFSYLA
Trigger: TGCTAAATAAGAAAAGACCCATTTGTCCATGGAATG...AGCCTTGTGGAAACTCATGTTCTCAGCATAATCTCTGAGGGATAGAATCTCAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR CCA 90 bp TGGACTGGCATAAAGCAGGAATGCATATGGCAATTTCTTTATATCACACCATACGACCTCATTAATCTCTaGAGAGTTTGGTGTATACAA +
Preference number: 4 (lower is better)
Translates to: WTGIKQECIWQFLYITPYDLINL*RVWCIQ
Trigger: TTGTATACACCAAACTCTCCAGAGATTAATGAGGTC...GTATGGTGTGATATAAAGAAATTGCCATATGCATTCCTGCTTTATGCCAGTCCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR TCA 90 bp CATAGTCTGTGGGATTCTAAGCGTGTTATAAATGACAAACATCTTCAATTTTGCTATGCTCTTCCAATATaGTGCAGTGAAGGGGAAATA +
Preference number: 4 (lower is better)
Translates to: HSLWDSKRVINDKHLQFCYALPI*CSEGEI
Trigger: TATTTCCCCTTCACTGCATCATATTGGAAGAGCATA...GCAAAATTGAAGATGTTTGTCATTTATAACACGCTTAGAATCCCACAGACTATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR GCA 90 bp CATAGTCTGTGGGATTCTAAGCGTGTTATAAATGACAAACATCTTCAATTTTGCCACTGTTCTGAAGACTaGCATTCATGTTCACATATC +
Preference number: 4 (lower is better)
Translates to: HSLWDSKRVINDKHLQFCHCSED*HSCSHI
Trigger: GATATGTGAACATGAATGGCAGTCTTCAGAACAGTG...GCAAAATTGAAGATGTTTGTCATTTATAACACGCTTAGAATCCCACAGACTATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR GCA 90 bp CATAGTCTGTGGGATTCTAAGCGTGTTATAAATGACAAACATCTTCAATTTTGCCCTGGTTATTTCCACTaGATACTTTTCACCTATGCA +
Preference number: 4 (lower is better)
Translates to: HSLWDSKRVINDKHLQFCPGYFH*ILFTYA
Trigger: TGCATAGGTGAAAAGTATGCAGTGGAAATAACCAGG...GCAAAATTGAAGATGTTTGTCATTTATAACACGCTTAGAATCCCACAGACTATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR GCA 90 bp TGGACTGGCATAAAGCAGGAATGCATATGGCAATTTCTTTATATCACACCATACATTCTAGTATTTCTCTaGTTCTTAGAGGGAATGAAC +
Preference number: 4 (lower is better)
Translates to: WTGIKQECIWQFLYITPYILVFL*FLEGMN
Trigger: GTTCATTCCCTCTAAGAAGCAGAGAAATACTAGAAT...GTATGGTGTGATATAAAGAAATTGCCATATGCATTCCTGCTTTATGCCAGTCCA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR CCA 90 bp CATAGTCTGTGGGATTCTAAGCGTGTTATAAATGACAAACATCTTCAATTTTGCTCTTTGCCTTGTCCATaGTTTCAAAAATGTCCTCAG +
Preference number: 4 (lower is better)
Translates to: HSLWDSKRVINDKHLQFCSLPCP*FQKCPQ
Trigger: CTGAGGACATTTTTGAAACCATGGACAAGGCAAAGA...GCAAAATTGAAGATGTTTGTCATTTATAACACGCTTAGAATCCCACAGACTATG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR CCA 90 bp CATAGTCTGTGGGATTCTAAGCGTGTTATAAATGACAAACATCTTCAATTTTGCAACTCAGTGAGTCTCTaGAAAATATCAGCACATGCT +
Preference number: 4 (lower is better)
Translates to: HSLWDSKRVINDKHLQFCNSVSL*KISAHA
Trigger: AGCATGTGCTGATATTTTCCAGAGACTCACTGAGTT...GCAAAATTGAAGATGTTTGTCATTTATAACACGCTTAGAATCCCACAGACTATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR CCA 90 bp CATAGTCTGTGGGATTCTAAGCGTGTTATAAATGACAAACATCTTCAATTTTGCGGCCAGAATATGTTCTaGCTTATTAGAAGTGTTCAC +
Preference number: 4 (lower is better)
Translates to: HSLWDSKRVINDKHLQFCGQNMF*LIRSVH
Trigger: GTGAACACTTCTAATAAGCCAGAACATATTCTGGCC...GCAAAATTGAAGATGTTTGTCATTTATAACACGCTTAGAATCCCACAGACTATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR TCA 90 bp CATAGTCTGTGGGATTCTAAGCGTGTTATAAATGACAAACATCTTCAATTTTGCGTGATTTTAAATGTGTaGAGAAACTCAGGGAGGTAT +
Preference number: 4 (lower is better)
Translates to: HSLWDSKRVINDKHLQFCVILNV*RNSGRY
Trigger: ATACCTCCCTGAGTTTCTTCACACATTTAAAATCAC...GCAAAATTGAAGATGTTTGTCATTTATAACACGCTTAGAATCCCACAGACTATG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR GCA 90 bp CATAGTCTGTGGGATTCTAAGCGTGTTATAAATGACAAACATCTTCAATTTTGCAAGTCTCTCTTTCTGTaGCGTTATCTGTTAACATTC +
Preference number: 4 (lower is better)
Translates to: HSLWDSKRVINDKHLQFCKSLFL*RYLLTF
Trigger: GAATGTTAACAGATAACGGCACAGAAAGAGAGACTT...GCAAAATTGAAGATGTTTGTCATTTATAACACGCTTAGAATCCCACAGACTATG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR GCA 90 bp CATAGTCTGTGGGATTCTAAGCGTGTTATAAATGACAAACATCTTCAATTTTGCGCTATCTTTGAGGAATaGTTGTGGAATATAGATCTG +
Preference number: 4 (lower is better)
Translates to: HSLWDSKRVINDKHLQFCAIFEE*LWNIDL
Trigger: CAGATCTATATTCCACAAGCATTCCTCAAAGATAGC...GCAAAATTGAAGATGTTTGTCATTTATAACACGCTTAGAATCCCACAGACTATG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS GCA 90 bp ACGGCCAGAAGAACTCAGCCAGGGAGAGGACTGGATGCCGGAGTCTaGAAATCCAGTTCTTCCAGAGCAGGGCTTGGAACTGGCGCCCAG +
Preference number: 5 (lower is better)
Translates to: TARRTQPGRGLDAGV*KSSSSRAGLGTGAQ
Trigger: CTGGGCGCCAGTTCCAAGCCCTGCTCTGGAAGAACTGGATTTGCAGACTCCGGCATCCAGTCCTCTCCCTGGCTGAGTTCTTCTGGCCGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS TCA 90 bp GACTCGCTCTGCTGTTTAAACTGCTCCCTAAGGGCTGCCAGACTGTaGCTGGCACCTGCAAGCAGGCTCTGCAGCAGACTACCCTGCTGC +
Preference number: 5 (lower is better)
Translates to: DSLCCLNCSLRAARL*LAPASRLCSRLPCC
Trigger: GCAGCAGGGTAGTCTGCTGCAGAGCCTGCTTGCAGGTGCCAGTCACAGTCTGGCAGCCCTTAGGGAGCAGTTTAAACAGCAGAGCGAGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS TCA 90 bp GATGGTAGTCTCTGGGGACATCCGCTGCCAAGCTGTCATTCAAGATaGGCAGGGCAGTGTGCAGGGCTTCCACCACCTTCCACGACTCGC +
Preference number: 5 (lower is better)
Translates to: DGSLWGHPLPSCHSR*AGQCAGLPPPSTTR
Trigger: GCGAGTCGTGGAAGGTGGTGGAAGCCCTGCACACTGCCCTGCTCATCTTGAATGACAGCTTGGCAGCGGATGTCCCCAGAGACTACCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS GCA 90 bp GCTGAGCGTCAGGGTGAGTCCTTGACCATAGGTCTCCTTCAGGTCTaGAGGAGGAGCATAGCATCTGAGCCTCCCCTGCTGGAGAACAGC +
Preference number: 5 (lower is better)
Translates to: AERQGESLTIGLLQV*RRSIASEPPLLENS
Trigger: GCTGTTCTCCAGCAGGGGAGGCTCAGATGCTATGCTCCTCCTGCAGACCTGAAGGAGACCTATGGTCAAGGACTCACCCTGACGCTCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS CCA 90 bp CAGAATCATCCAGCACACCCAGCCAAATGTCATGCCCCCTGGCTCTaGAGCGCGGTACATGTTACCCCACTGGATCCCTTCCTCCTGTCC +
Preference number: 5 (lower is better)
Translates to: QNHPAHPAKCHAPWL*SAVHVTPLDPFLLS
Trigger: GGACAGGAGGAAGGGATCCAGTGGGGTAACATGTACCGCGCTCCAGAGCCAGGGGGCATGACATTTGGCTGGGTGTGCTGGATGATTCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS CCA 90 bp GTCACTGGTATGGCATGGGTAGGGTGCTGCCTGTGCCTGTGTGGTTaGCTCCAGGGATTCCTGCCCAGTCTGTACCACAATGATGGCTCT +
Preference number: 5 (lower is better)
Translates to: VTGMAWVGCCLCLCG*LQGFLPSLYHNDGS
Trigger: AGAGCCATCATTGTGGTACAGACTGGGCAGGAATCCCTGGAGCCAACCACACAGGCACAGGCAGCACCCTACCCATGCCATACCAGTGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS TCA 90 bp ATCCAAACCTCCTCAAGACTTTTGGTCAGCCTGCGTATGTGCTGCTaGACCACTCCCACCAAGGGCTGGCACGTGCAGCGATGGCTGGAA +
Preference number: 5 (lower is better)
Translates to: IQTSSRLLVSLRMCC*TTPTKGWHVQRWLE
Trigger: TTCCAGCCATCGCTGCACGTGCCAGCCCTTGGTGGGAGTGGTTCAGCAGCACATACGCAGGCTGACCAAAAGTCTTGAGGAGGTTTGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS TCA 90 bp CAGATGGCACCAGCAAGTACTCTTCCACATCATAGCCCGAGAGGTTaGGCAGTGTGTGTCCCAGGCAGTTGGTCAGAGAGGGAGCACCAG +
Preference number: 5 (lower is better)
Translates to: QMAPASTLPHHSPRG*AVCVPGSWSEREHQ
Trigger: CTGGTGCTCCCTCTCTGACCAACTGCCTGGGACACACACTGCTCAACCTCTCGGGCTATGATGTGGAAGAGTACTTGCTGGTGCCATCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS GCA 90 bp GGGACATCCGCTGCCAAGCTGTCATTCAAGATGAGCAGGGCAGTGTaGAGGGCTTCCACCACCTTCCACGACTCGCTCTGCTGTTTAAAC +
Preference number: 5 (lower is better)
Translates to: GTSAAKLSFKMSRAV*RASTTFHDSLCCLN
Trigger: GTTTAAACAGCAGAGCGAGTCGTGGAAGGTGGTGGAAGCCCTGCACACTGCCCTGCTCATCTTGAATGACAGCTTGGCAGCGGATGTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS GCA 90 bp TGGCCAGGTGTAAGTTTGAGTGGAGGGTACGTGATGGCCAAAGGCTaGACCATGAACAAGCCCATGGCCAAGGCCACAAAGAGCACAGGC +
Preference number: 5 (lower is better)
Translates to: WPGVSLSGGYVMAKG*TMNKPMAKATKSTG
Trigger: GCCTGTGCTCTTTGTGGCCTTGGCCATGGGCTTGTTCATGGTGCAGCCTTTGGCCATCACGTACCCTCCACTCAAACTTACACCTGGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS GCA 90 bp GGATTGCATCAAACAGAATCATCCAGCACACCCAGCCAAATGTCATaGCCCCTGGCTCTGGAGCGCGGTACATGTTACCCCACTGGATCC +
Preference number: 5 (lower is better)
Translates to: GLHQTESSSTPSQMS*PLALERGTCYPTGS
Trigger: GGATCCAGTGGGGTAACATGTACCGCGCTCCAGAGCCAGGGGGCATGACATTTGGCTGGGTGTGCTGGATGATTCTGTTTGATGCAATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS GCA 90 bp GTTAGCACTGCGGCACAGCCATCCCGAACCTCTTGTGTTATTGTTTaGCAGAGGTACCGCTTAGAGCAGGGGTCCATCCCAGAGCTTGGT +
Preference number: 5 (lower is better)
Translates to: VSTAAQPSRTSCVIV*QRYRLEQGSIPELG
Trigger: ACCAAGCTCTGGGATGGACCCCTGCTCTAAGCGGTACCTCTGGCAAACAATAACACAAGAGGTTCGGGATGGCTGTGCCGCAGTGCTAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS GCA 90 bp CAGGAATCTTTGACATCCAAACCTCCTCAAGACTTTTGGTCAGCCTaGGTATGTGCTGCTGAACCACTCCCACCAAGGGCTGGCACGTGC +
Preference number: 5 (lower is better)
Translates to: QESLTSKPPQDFWSA*VCAAEPLPPRAGTC
Trigger: GCACGTGCCAGCCCTTGGTGGGAGTGGTTCAGCAGCACATACGCAGGCTGACCAAAAGTCTTGAGGAGGTTTGGATGTCAAAGATTCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS GCA 90 bp GAAGCTCATCCAGGGCGTCCTGCTGTGGACAGTAGCCAATCAGAATaGCTGCTTTGCCAGCAGAAGCCAGATCCACCATATCTCCTTGAG +
Preference number: 5 (lower is better)
Translates to: EAHPGRPAVDSSQSE*LLCQQKPDPPYLLE
Trigger: CTCAAGGAGATATGGTGGATCTGGCTTCTGCTGGCAAAGCAGGCATTCTGATTGGCTACTGTCCACAGCAGGACGCCCTGGATGAGCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS CCA 90 bp TCTCCACTGCCTGGAATCGGTCCAACACCACACAGGAAGAGAGATTaGCCAACATACCACCCAAGAACCGGAAGTGTCCAGCTTCCACGT +
Preference number: 5 (lower is better)
Translates to: SPLPGIGPTPHRKRD*PTYHPRTGSVQLPR
Trigger: ACGTGGAAGCTGGACACTTCCGGTTCTTGGGTGGTATGTTGGCCAATCTCTCTTCCTGTGTGGTGTTGGACCGATTCCAGGCAGTGGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS TCA 90 bp GTGTCTGAGATCCCATATCCTGTTAGGTGCAGGTGCTGTAAGTTCTaGTCCAGAGCCTGGCAGAGCCCCTTGAAGCAGGTTCTGTCTGCA +
Preference number: 5 (lower is better)
Translates to: VSEIPYPVRCRCCKF*SRAWQSPLKQVLSA
Trigger: TGCAGACAGAACCTGCTTCAAGGGGCTCTGCCAGGCTCTGGATCAGAACTTACAGCACCTGCACCTAACAGGATATGGGATCTCAGACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS GCA 90 bp CATGAGTTCATGTGCCTTGGTCTCCAGGGTGTCAACAGTCTCCACTaGCTGGAATCGGTCCAACACCACACAGGAAGAGAGATTGGCCAA +
Preference number: 5 (lower is better)
Translates to: HEFMCLGLQGVNSLH*LESVQHHTGREIGQ
Trigger: TTGGCCAATCTCTCTTCCTGTGTGGTGTTGGACCGATTCCAGGCAGTGGAGACTGTTGACACCCTGGAGACCAAGGCACATGAACTCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS GCA 90 bp AGCATTAGGTGTTCACGCACAGTGAGGTTGTCCAGGAGAACATCCTaGTGTGGACACACCCCCAGCTCCTCTCTGACCTTGGACAAATCT +
Preference number: 5 (lower is better)
Translates to: SIRCSRTVRLSRRTS*CGHTPSSSLTLDKS
Trigger: AGATTTGTCCAAGGTCAGAGAGGAGCTGGGGGTGTGTCCACAGCAGGATGTTCTCCTGGACAACCTCACTGTGCGTGAACACCTAATGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS GCA 90 bp GGCAGTAACAAATCTGAGGTGGTGCTTTTCCAGGCTCGAAGTGTATaGAGTAGCCGCTTCCTCAGGAGTGCCACTGCTTGTCCCAGAAGT +
Preference number: 5 (lower is better)
Translates to: GSNKSEVVLFQARSV*SSRFLRSATACPRS
Trigger: ACTTCTGGGACAAGCAGTGGCACTCCTGAGGAAGCGGCTACTGCATACACTTCGAGCCTGGAAAAGCACCACCTCAGATTTGTTACTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS GCA 90 bp TGGCCAAGGCCACAAAGAGCACAGGCAGTAACAAATCTGAGGTGGTaGTTTTCCAGGCTCGAAGTGTATGCAGTAGCCGCTTCCTCAGGA +
Preference number: 5 (lower is better)
Translates to: WPRPQRAQAVTNLRW*FSRLEVYAVAASSG
Trigger: TCCTGAGGAAGCGGCTACTGCATACACTTCGAGCCTGGAAAAGCACCACCTCAGATTTGTTACTGCCTGTGCTCTTTGTGGCCTTGGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS GCA 90 bp CAGAGCTACCAATCGATGCTGATAAGATGGAGAATCCCAGGACAATaGAGAGGGCAACACCACACTGGCGGATGCTCTCCAGGATCCTGT +
Preference number: 5 (lower is better)
Translates to: QSYQSMLIRWRIPGQ*RGQHHTGGCSPGSC
Trigger: ACAGGATCCTGGAGAGCATCCGCCAGTGTGGTGTTGCCCTCTGCATTGTCCTGGGATTCTCCATCTTATCAGCATCGATTGGTAGCTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS CCA 90 bp AACCTCAGGGTGGAGATGGTCACGTTCAGAACATGTCTAGAAACCTaGGGGATGGTCTGGTGCAGGGGTAGCCAATCCAAATCTCCCAGA +
Preference number: 5 (lower is better)
Translates to: NLRVEMVTFRTCLET*GMVWCRGSQSKSPR
Trigger: TCTGGGAGATTTGGATTGGCTACCCCTGCACCAGACCATCCCCCAGGTTTCTAGACATGTTCTGAACGTGACCATCTCCACCCTGAGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS CCA 90 bp GAGCCAGAGTGGCCATGTTCTCCAGGAACCAGGACAGGAAGTGGATaGTTGGATGCAGTCCCATCATCCGCATGTACTCTTCTATCTGGA +
Preference number: 5 (lower is better)
Translates to: EPEWPCSPGTRTGSG*LDAVPSSACTLLSG
Trigger: TCCAGATAGAAGAGTACATGCGGATGATGGGACTGCATCCAACCATCCACTTCCTGTCCTGGTTCCTGGAGAACATGGCCACTCTGGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS CCA 90 bp CTCAGAGCCAGAGTGGCCATGTTCTCCAGGAACCAGGACAGGAAGTaGATGGTTGGATGCAGTCCCATCATCCGCATGTACTCTTCTATC +
Preference number: 5 (lower is better)
Translates to: LRARVAMFSRNQDRK*MVGCSPIIRMYSSI
Trigger: GATAGAAGAGTACATGCGGATGATGGGACTGCATCCAACCATCCACTTCCTGTCCTGGTTCCTGGAGAACATGGCCACTCTGGCTCTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS CCA 90 bp CCATGGCCAAGGCCACAAAGAGCACAGGCAGTAACAAATCTGAGGTaGTGCTTTTCCAGGCTCGAAGTGTATGCAGTAGCCGCTTCCTCA +
Preference number: 5 (lower is better)
Translates to: PWPRPQRAQAVTNLR*CFSRLEVYAVAASS
Trigger: TGAGGAAGCGGCTACTGCATACACTTCGAGCCTGGAAAAGCACCACCTCAGATTTGTTACTGCCTGTGCTCTTTGTGGCCTTGGCCATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS CCA 90 bp TCACTCTGTCCCTCACCACAGAGCTACCAATCGATGCTGATAAGATaGAGAATCCCAGGACAATGCAGAGGGCAACACCACACTGGCGGA +
Preference number: 5 (lower is better)
Translates to: SLCPSPQSYQSMLIR*RIPGQCRGQHHTGG
Trigger: TCCGCCAGTGTGGTGTTGCCCTCTGCATTGTCCTGGGATTCTCCATCTTATCAGCATCGATTGGTAGCTCTGTGGTGAGGGACAGAGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS TCA 90 bp GATCCCAGACGATATTCTTCAGGGACAGGTGGTAAATGGTCTCATTaGCAACAGCGCTGTGCTGCTGCAGAAACCTCAGGGTGGAGATGG +
Preference number: 5 (lower is better)
Translates to: DPRRYSSGTGGKWSH*QQRCAAAETSGWRW
Trigger: CCATCTCCACCCTGAGGTTTCTGCAGCAGCACAGCGCTGTTGTCAATGAGACCATTTACCACCTGTCCCTGAAGAATATCGTCTGGGATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS TCA 90 bp CTCAGGTTCAGGTTCTGGCCCATCATCACAAGTAGAGAGAAGACTTaGGACCCAGGCAGGCTGCAGAGTTCCCTTGTGACAAACCAGGAT +
Preference number: 5 (lower is better)
Translates to: LRFRFWPIITSREKT*DPGRLQSSLVTNQD
Trigger: ATCCTGGTTTGTCACAAGGGAACTCTGCAGCCTGCCTGGGTCTCAAGTCTTCTCTCTACTTGTGATGATGGGCCAGAACCTGAACCTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS TCA 90 bp TGGTCTCTGTGGAAGGTGAGAGTGAGTTCCTGGACAGCCACCTTGTaGTCTTCATACTCCTTGGTCACAGATATCAGAGCCACTCCTGGG +
Preference number: 5 (lower is better)
Translates to: WSLWKVRVSSWTATL*SSYSLVTDIRATPG
Trigger: CCCAGGAGTGGCTCTGATATCTGTGACCAAGGAGTATGAAGATCACAAGGTGGCTGTCCAGGAACTCACTCTCACCTTCCACAGAGACCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS TCA 90 bp AGAATGCCTGCTTTGCCAGCAGAAGCCAGATCCACCATATCTCCTTaGGGAGTCCTGATGACGGTGTATCCTGAACTTGGGGGAGTTTCG +
Preference number: 5 (lower is better)
Translates to: RMPALPAEARSTISP*GVLMTVYPELGGVS
Trigger: CGAAACTCCCCCAAGTTCAGGATACACCGTCATCAGGACTCCTCAAGGAGATATGGTGGATCTGGCTTCTGCTGGCAAAGCAGGCATTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS GCA 90 bp TGGCGATGGACCAAAGTGACTCCTTGCAAAGCAGCTAAGATAAGGTaGCTCATCGCACCTTGCTTGCAACTCAGCGCAGCACACAGAATG +
Preference number: 5 (lower is better)
Translates to: WRWTKVTPCKAAKIR*LIAPCLQLSAAHRM
Trigger: CATTCTGTGTGCTGCGCTGAGTTGCAAGCAAGGTGCGATGAGGCACCTTATCTTAGCTGCTTTGCAAGGAGTCACTTTGGTCCATCGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR CAA 90 bp TTCCTGCACTTCTTAGTTTGGACTCTTGTCAGTTCATGGCTGAGTCTGTCACAGGCCTGGCAGAGCCCCTaGAAGCAGGTTCTGTCTGCA +
Preference number: 5 (lower is better)
Translates to: FLHFLVWTLVSSWLSLSQAWQSP*KQVLSA
Trigger: TGCAGACAGAACCTGCTTCAAGGGGCTCTGCCAGGC...CTGTGACAGACTCAGCCATGAACTGACAAGAGTCCAAACTAAGAAGTGCAGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR CAA 90 bp GGGGCCATTTGCTCCCAACACTGTCCATTTAATTACAGGCAACTGTGTGTGTTTGTGTGTCCCAGGCAGTaGGTCAGAGAGGGAGCACCA +
Preference number: 5 (lower is better)
Translates to: GAICSQHCPFNYRQLCVFVCPRQ*VREGAP
Trigger: TGGTGCTCCCTCTCTGACCAACTGCCTGGGACACAC...AAACACACACAGTTGCCTGTAATTAAATGGACAGTGTTGGGAGCAAATGGCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS TCA 90 bp GACAAGCTGGCTTTCACAGCCACCAGGAGAGAAACTATTCTCAGGTaGGGTATCAGCTCTTGGAAGCTGGAAGACCCGAGAACAGGTAAG +
Preference number: 5 (lower is better)
Translates to: DKLAFTATRRETILR*GISSWKLEDPRTGK
Trigger: CTTACCTGTTCTCGGGTCTTCCAGCTTCCAAGAGCTGATACCTCACCTGAGAATAGTTTCTCTCCTGGTGGCTGTGAAAGCCAGCTTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS GCA 90 bp GTGACTCCTTGCAAAGCAGCTAAGATAAGGTGCCTCATCGCACCTTaGTTGCAACTCAGCGCAGCACACAGAATGTCCTTAGTCAGGGAA +
Preference number: 5 (lower is better)
Translates to: VTPCKAAKIRCLIAP*LQLSAAHRMSLVRE
Trigger: TTCCCTGACTAAGGACATTCTGTGTGCTGCGCTGAGTTGCAAGCAAGGTGCGATGAGGCACCTTATCTTAGCTGCTTTGCAAGGAGTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS CCA 90 bp TGGAGAACAGCCACGTGGTCACTGAGCATCTCAGCTTCATCCAGGTaGTGGGTTGTGAAGATAATTGTGCGACCTTCTCGGTACTTGAGT +
Preference number: 5 (lower is better)
Translates to: WRTATWSLSISASSR*WVVKIIVRPSRYLS
Trigger: ACTCAAGTACCGAGAAGGTCGCACAATTATCTTCACAACCCACCACCTGGATGAAGCTGAGATGCTCAGTGACCACGTGGCTGTTCTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS CCA 90 bp AGGGCTGTGGCCGCCAAGTTCTCCCGAAATGTGAAAGCTGTTAACTaGAAGGCTCCTATAACAGCGACACACAGGCAGACAGAAACTAAG +
Preference number: 5 (lower is better)
Translates to: RAVAAKFSRNVKAVN*KAPITATHRQTETK
Trigger: CTTAGTTTCTGTCTGCCTGTGTGTCGCTGTTATAGGAGCCTTCCAGTTAACAGCTTTCACATTTCGGGAGAACTTGGCGGCCACAGCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR CAA 90 bp TTCCTGCACTTCTTAGTTTGGACTCTTGTCAGTTCATGGCTGAGTCTGTCACAGTGCACTGTGAGTCGCTaGGGGGTGGCAGGTGAAGAA +
Preference number: 5 (lower is better)
Translates to: FLHFLVWTLVSSWLSLSQCTVSR*GVAGEE
Trigger: TTCTTCACCTGCCACCCCCAAGCGACTCACAGTGCA...CTGTGACAGACTCAGCCATGAACTGACAAGAGTCCAAACTAAGAAGTGCAGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR CAA 90 bp GCTATGTATAATCCTTCTAGAACTAAACTTTGCCTGGGGCCATTTGCTCCCAACGGTCCACCCCACTGCTaGGCTCATCCAGAACCACTG +
Preference number: 5 (lower is better)
Translates to: AMYNPSRTKLCLGPFAPNGPPHC*AHPEPL
Trigger: CAGTGGTTCTGGATGAGCCAAGCAGTGGGGTGGACC...GTTGGGAGCAAATGGCCCCAGGCAAAGTTTAGTTCTAGAAGGATTATACATAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS TCA 90 bp CTCTGTGTCTGGGAGGTTCTTGAAAACGAAGTACTGTCAGAATCATaGACAGGATACACGGCCAGAAGAACTCAGCCAGGGAGAGGACTG +
Preference number: 5 (lower is better)
Translates to: LCVWEVLENEVLSES*TGYTARRTQPGRGL
Trigger: CAGTCCTCTCCCTGGCTGAGTTCTTCTGGCCGTGTATCCTGTTCATGATTCTGACAGTACTTCGTTTTCAAGAACCTCCCAGACACAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS TCA 90 bp GTAGAGAGAAGACTTGAGACCCAGGCAGGCTGCAGAGTTCCCTTGTaGCAAACCAGGATTTTTCACTCTCAGGAAACGTCAGCAGGAGAT +
Preference number: 5 (lower is better)
Translates to: VERRLETQAGCRVPL*QTRIFHSQETSAGD
Trigger: ATCTCCTGCTGACGTTTCCTGAGAGTGAAAAATCCTGGTTTGTCACAAGGGAACTCTGCAGCCTGCCTGGGTCTCAAGTCTTCTCTCTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS TCA 90 bp CACTCCTGGGTTACCTCCTTCCATTTCTCCTGGGCCATTTTGCTGTaGGAGCCCTTTGTTGCCAAAGTCCTCATTGAAGAAGAACAGACC +
Preference number: 5 (lower is better)
Translates to: HSWVTSFHFSWAILL*EPFVAKVLIEEEQT
Trigger: GGTCTGTTCTTCTTCAATGAGGACTTTGGCAACAAAGGGCTCTCACAGCAAAATGGCCCAGGAGAAATGGAAGGAGGTAACCCAGGAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS TCA 90 bp CTCTGTGTCTGGGAGGTTCTTGAAAACGAAGTACTGTCAGAATCATaGACAGGATACACGGCCAGAAGAACTCAGCCAGGGAGAGGACCA +
Preference number: 5 (lower is better)
Translates to: LCVWEVLENEVLSES*TGYTARRTQPGRGP
Trigger: TGGTCCTCTCCCTGGCTGAGTTCTTCTGGCCGTGTATCCTGTTCATGATTCTGACAGTACTTCGTTTTCAAGAACCTCCCAGACACAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000151522.2
CDS GCA 90 bp CTAATGAATTCAAACCCGCCTGGAGAAAGTGTGTCACAGCACCCATaGTATCTTCCAAGTGAGCACTGGACATGTACAGTCTGGGCAGTG +
Preference number: 5 (lower is better)
Translates to: LMNSNPPGESVSQHP*YLPSEHWTCTVWAV
Trigger: CACTGCCCAGACTGTACATGTCCAGTGCTCACTTGGAAGATAGCATGGGTGCTGTGACACACTTTCTCCAGGCGGGTTTGAATTCATTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS GCA 90 bp AGAGCCACTCCTGGGTTACCTCCTTCCATTTCTCCTGGGCCATTTTaGTGTGAGAGCCCTTTGTTGCCAAAGTCCTCATTGAAGAAGAAC +
Preference number: 5 (lower is better)
Translates to: RATPGLPPSISPGPF*CESPLLPKSSLKKN
Trigger: GTTCTTCTTCAATGAGGACTTTGGCAACAAAGGGCTCTCACAGCAAAATGGCCCAGGAGAAATGGAAGGAGGTAACCCAGGAGTGGCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS CCA 90 bp GAGATGGTCACGTTCAGAACATGTCTAGAAACCTGGGGGATGGTCTaGTGCAGGGGTAGCCAATCCAAATCTCCCAGAGATGCTAATGAA +
Preference number: 5 (lower is better)
Translates to: EMVTFRTCLETWGMV*CRGSQSKSPRDANE
Trigger: TTCATTAGCATCTCTGGGAGATTTGGATTGGCTACCCCTGCACCAGACCATCCCCCAGGTTTCTAGACATGTTCTGAACGTGACCATCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR CAA 90 bp GGGGCCATTTGCTCCCAACACTGTCCATTTAATTACAGGCAACTGTGTGTGTTTGTATCCACCACATCCTaGGGAAGCAGACGGGAGAGA +
Preference number: 5 (lower is better)
Translates to: GAICSQHCPFNYRQLCVFVSTTS*GSRRER
Trigger: TCTCTCCCGTCTGCTTCCCAAGGATGTGGTGGATAC...AAACACACACAGTTGCCTGTAATTAAATGGACAGTGTTGGGAGCAAATGGCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR CAA 90 bp CACTGTCCATTTAATTACAGGCAACTGTGTGTGTTTAAACCCAGGATATTAGGCGGGGCAGCCCTTCCCTaGAGAAGCCTGCTTTGCCGA +
Preference number: 5 (lower is better)
Translates to: HCPFNYRQLCVFKPRILGGAALP*RSLLCR
Trigger: TCGGCAAAGCAGGCTTCTCAAGGGAAGGGCTGCCCC...GCCTAATATCCTGGGTTTAAACACACACAGTTGCCTGTAATTAAATGGACAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS TCA 90 bp AAGCTGATGTTTCTACAACTTGAGCCAGTATTACAAAGAAGTCCTTaGACAAAAGGAAGAACACCCCGGCTGGGCAGATCCCGGGCTTGC +
Preference number: 5 (lower is better)
Translates to: KLMFLQLEPVLQRSP*TKGRTPRLGRSRAC
Trigger: GCAAGCCCGGGATCTGCCCAGCCGGGGTGTTCTTCCTTTTGTTCAAGGACTTCTTTGTAATACTGGCTCAAGTTGTAGAAACATCAGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000042740.13
ENSMUST00000151522.2
CDS GCA 90 bp ATGGTCACGTTCAGAACATGTCTAGAAACCTGGGGGATGGTCTGGTaGAGGGGTAGCCAATCCAAATCTCCCAGAGATGCTAATGAATTC +
Preference number: 5 (lower is better)
Translates to: MVTFRTCLETWGMVW*RGSQSKSPRDANEF
Trigger: GAATTCATTAGCATCTCTGGGAGATTTGGATTGGCTACCCCTGCACCAGACCATCCCCCAGGTTTCTAGACATGTTCTGAACGTGACCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS GCA 90 bp ATGGTTTTTGGACTGCGCGTGCTTCAAGATGAGATTCATGAGATCTaGTATTTGAAGGTTGGTGCCGCTGAAACTGGGAGGCGTTTCCTG +
Preference number: 5 (lower is better)
Translates to: MVFGLRVLQDEIHEI*YLKVGAAETGRRFL
Trigger: CAGGAAACGCCTCCCAGTTTCAGCGGCACCAACCTTCAAATAGCAGATCTCATGAATCTCATCTTGAAGCACGCGCAGTCCAAAAACCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS GCA 90 bp TCTGCAAAGATAATGAGCACCCGCAGAGCCATCATTTCCACTCTCTaGAGCATCTTCACAGTTTTCATGGGCTTCTGCAGCTGCTGGAAA +
Preference number: 5 (lower is better)
Translates to: SAKIMSTRRAIISTL*SIFTVFMGFCSCWK
Trigger: TTTCCAGCAGCTGCAGAAGCCCATGAAAACTGTGAAGATGCTGCAGAGAGTGGAAATGATGGCTCTGCGGGTGCTCATTATCTTTGCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS GCA 90 bp ACTCAGCGCAGCACACAGAATGTCCTTAGTCAGGGAAGGATTTTCTaGAAAGATAATGAGCACCCGCAGAGCCATCATTTCCACTCTCTG +
Preference number: 5 (lower is better)
Translates to: TQRSTQNVLSQGRIF*KDNEHPQSHHFHSL
Trigger: CAGAGAGTGGAAATGATGGCTCTGCGGGTGCTCATTATCTTTGCAGAAAATCCTTCCCTGACTAAGGACATTCTGTGTGCTGCGCTGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS GCA 90 bp TGCTCTGTTTCAACATCTATGTCCTTAGCAGGCTTAACTATGTCCTaGAGGACAGAGTGGTCCCTTGGCCATCTCAGAAGGTCTCCATGT +
Preference number: 5 (lower is better)
Translates to: CSVSTSMSLAGLTMS*RTEWSLGHLRRSPC
Trigger: ACATGGAGACCTTCTGAGATGGCCAAGGGACCACTCTGTCCTGCAGGACATAGTTAAGCCTGCTAAGGACATAGATGTTGAAACAGAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS CCA 90 bp CAGTATTACAAAGAAGTCCTTGAACAAAAGGAAGAACACCCCGGCTaGGCAGATCCCGGGCTTGCAAGTAACAATTCTCTCTGTGTCTGG +
Preference number: 5 (lower is better)
Translates to: QYYKEVLEQKEEHPG*ADPGLASNNSLCVW
Trigger: CCAGACACAGAGAGAATTGTTACTTGCAAGCCCGGGATCTGCCCAGCCGGGGTGTTCTTCCTTTTGTTCAAGGACTTCTTTGTAATACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000042740.13
ENSMUST00000151522.2
CDS CCA 90 bp CCAGGAGAGAAACTATTCTCAGGTGAGGTATCAGCTCTTGGAAGCTaGAAGACCCGAGAACAGGTAAGGCTTATTTCTGACAGCTGTGTC +
Preference number: 5 (lower is better)
Translates to: PGEKLFSGEVSALGS*KTREQVRLISDSCV
Trigger: GACACAGCTGTCAGAAATAAGCCTTACCTGTTCTCGGGTCTTCCAGCTTCCAAGAGCTGATACCTCACCTGAGAATAGTTTCTCTCCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS CCA 90 bp TGGAATTCCAGTCTGCTAGGTCATGGACTGCACAGGCCAATCTCCTaGTTATTTCCACTGCATACTTTTCACCTATGCACTGTGAGTCGC +
Preference number: 5 (lower is better)
Translates to: WNSSLLGHGLHRPIS*LFPLHTFHLCTVSR
Trigger: GCGACTCACAGTGCATAGGTGAAAAGTATGCAGTGGAAATAACCAGGAGATTGGCCTGTGCAGTCCATGACCTAGCAGACTGGAATTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR CAA 90 bp CTGAGTCTGTCACAGACAACCTGTCACCTACCTGGTGTGGCAATCAGCAGAAAATTGCACAGTGGTGTTTaGAAGACCTGCACCTTGGAT +
Preference number: 5 (lower is better)
Translates to: LSLSQTTCHLPGVAISRKLHSGV*KTCTLD
Trigger: ATCCAAGGTGCAGGTCTTCAAAACACCACTGTGCAA...TTTTCTGCTGATTGCCACACCAGGTAGGTGACAGGTTGTCTGTGACAGACTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR CAA 90 bp ATAATCCTTCTAGAACTAAACTTTGCCTGGGGCCATTTGCTCCCAACACTGTCCACAGGAAGTGGATGGTaGGATGCAGTCCCATCATCC +
Preference number: 5 (lower is better)
Translates to: IILLELNFAWGHLLPTLSTGSGW*DAVPSS
Trigger: GGATGATGGGACTGCATCCAACCATCCACTTCCTGT...GGACAGTGTTGGGAGCAAATGGCCCCAGGCAAAGTTTAGTTCTAGAAGGATTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS GCA 90 bp AGGCTTATTTCTGACAGCTGTGTCCCAAGATCCTGCCAGCCAAAATaGCCACCATGTTCTGAAACTGATCCATTTGTGTGTCCTGCAATG +
Preference number: 5 (lower is better)
Translates to: RLISDSCVPRSCQPK*PPCSETDPFVCPAM
Trigger: CATTGCAGGACACACAAATGGATCAGTTTCAGAACATGGTGGGCATTTTGGCTGGCAGGATCTTGGGACACAGCTGTCAGAAATAAGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS GCA 90 bp CGAGAACAGGTAAGGCTTATTTCTGACAGCTGTGTCCCAAGATCCTaGCAGCCAAAATGCCCACCATGTTCTGAAACTGATCCATTTGTG +
Preference number: 5 (lower is better)
Translates to: REQVRLISDSCVPRS*QPKCPPCSETDPFV
Trigger: CACAAATGGATCAGTTTCAGAACATGGTGGGCATTTTGGCTGGCAGGATCTTGGGACACAGCTGTCAGAAATAAGCCTTACCTGTTCTCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS GCA 90 bp GGACACTGGAGAGAACCTTTGAATGGGAAATGTTGGCTTCTAAGATaGTGTGGATGGTTTCCTCAGAGATGTGGAAGAAGGAGCGAAGGT +
Preference number: 5 (lower is better)
Translates to: GHWREPLNGKCWLLR*CGWFPQRCGRRSEG
Trigger: ACCTTCGCTCCTTCTTCCACATCTCTGAGGAAACCATCCACAGCATCTTAGAAGCCAACATTTCCCATTCAAAGGTTCTCTCCAGTGTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS CCA 90 bp CAGCACCCATGCTATCTTCCAAGTGAGCACTGGACATGTACAGTCTaGGCAGTGAATGTAGAAAATCCCAAATATGAGGCTGCTGGTGAA +
Preference number: 5 (lower is better)
Translates to: QHPCYLPSEHWTCTV*AVNVENPKYEAAGE
Trigger: TTCACCAGCAGCCTCATATTTGGGATTTTCTACATTCACTGCCCAGACTGTACATGTCCAGTGCTCACTTGGAAGATAGCATGGGTGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS CCA 90 bp CGAAGCAGCTCATTTAAAACACTGGTCTCGTTGAAGAATAGGGTATaGCATAGCACTCCCCAGACACTCCTCCATATGCTAGAGTTCCCA +
Preference number: 5 (lower is better)
Translates to: RSSSFKTLVSLKNRV*HSTPQTLLHMLEFP
Trigger: TGGGAACTCTAGCATATGGAGGAGTGTCTGGGGAGTGCTATGCCATACCCTATTCTTCAACGAGACCAGTGTTTTAAATGAGCTGCTTCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS CCA 90 bp CTGGAGAGAACCTTTGAATGGGAAATGTTGGCTTCTAAGATGCTGTaGATGGTTTCCTCAGAGATGTGGAAGAAGGAGCGAAGGTCCTCA +
Preference number: 5 (lower is better)
Translates to: LERTFEWEMLASKML*MVSSEMWKKERRSS
Trigger: TGAGGACCTTCGCTCCTTCTTCCACATCTCTGAGGAAACCATCCACAGCATCTTAGAAGCCAACATTTCCCATTCAAAGGTTCTCTCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR CAA 90 bp CTGAGTCTGTCACAGACAACCTGTCACCTACCTGGTGTGGCAATCAGCAGAAAATCATCCTCAGAAGTGTaGGACAAGATGGAACATACC +
Preference number: 5 (lower is better)
Translates to: LSLSQTTCHLPGVAISRKSSSEV*DKMEHT
Trigger: GGTATGTTCCATCTTGTCCAACACTTCTGAGGATGA...TTTTCTGCTGATTGCCACACCAGGTAGGTGACAGGTTGTCTGTGACAGACTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR CAA 90 bp TTCCTGCACTTCTTAGTTTGGACTCTTGTCAGTTCATGGCTGAGTCTGTCACAGGGGCAGAAGCATTCTTaGTCAACAGCTGGTTTAGCC +
Preference number: 5 (lower is better)
Translates to: FLHFLVWTLVSSWLSLSQGQKHS*STAGLA
Trigger: GGCTAAACCAGCTGTTGACAAAGAATGCTTCTGCCC...CTGTGACAGACTCAGCCATGAACTGACAAGAGTCCAAACTAAGAAGTGCAGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR CAA 90 bp TTCCTGCACTTCTTAGTTTGGACTCTTGTCAGTTCATGGCTGAGTCTGTCACAGACCTACTTACATCAGTaGAATTCCCACTGGCCACGG +
Preference number: 5 (lower is better)
Translates to: FLHFLVWTLVSSWLSLSQTYLHQ*NSHWPR
Trigger: CCGTGGCCAGTGGGAATTCAACTGATGTAAGTAGGT...CTGTGACAGACTCAGCCATGAACTGACAAGAGTCCAAACTAAGAAGTGCAGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR CAA 90 bp ATAATCCTTCTAGAACTAAACTTTGCCTGGGGCCATTTGCTCCCAACACTGTCCATGAGTTCATGTGCCTaGGTCTCCAGGGTGTCAACA +
Preference number: 5 (lower is better)
Translates to: IILLELNFAWGHLLPTLSMSSCA*VSRVST
Trigger: TGTTGACACCCTGGAGACCAAGGCACATGAACTCAT...GGACAGTGTTGGGAGCAAATGGCCCCAGGCAAAGTTTAGTTCTAGAAGGATTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR CAA 90 bp GCTATGTATAATCCTTCTAGAACTAAACTTTGCCTGGGGCCATTTGCTCCCAACCTCCAAGCCTTGGTTTaGCAGATGGCACCAGCAAGT +
Preference number: 5 (lower is better)
Translates to: AMYNPSRTKLCLGPFAPNLQALV*QMAPAS
Trigger: ACTTGCTGGTGCCATCTGCAAAACCAAGGCTTGGAG...GTTGGGAGCAAATGGCCCCAGGCAAAGTTTAGTTCTAGAAGGATTATACATAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR CAA 90 bp GCTATGTATAATCCTTCTAGAACTAAACTTTGCCTGGGGCCATTTGCTCCCAACACCAACCTCCAAGCCTaGGTTTTGCAGATGGCACCA +
Preference number: 5 (lower is better)
Translates to: AMYNPSRTKLCLGPFAPNTNLQA*VLQMAP
Trigger: TGGTGCCATCTGCAAAACCAAGGCTTGGAGGTTGGT...GTTGGGAGCAAATGGCCCCAGGCAAAGTTTAGTTCTAGAAGGATTATACATAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR CAA 90 bp GGGGCCATTTGCTCCCAACACTGTCCATTTAATTACAGGCAACTGTGTGTGTTTGCCATCCCGAACCTCTaGTGTTATTGTTTGCCAGAG +
Preference number: 5 (lower is better)
Translates to: GAICSQHCPFNYRQLCVFAIPNL*CYCLPE
Trigger: CTCTGGCAAACAATAACACAAGAGGTTCGGGATGGC...AAACACACACAGTTGCCTGTAATTAAATGGACAGTGTTGGGAGCAAATGGCCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS TCA 90 bp AATGCCCACCATGTTCTGAAACTGATCCATTTGTGTGTCCTGCAATaGCAGCTTGCAAACTATGACCAGCATCCTTCACTGCTCGAAGCA +
Preference number: 5 (lower is better)
Translates to: NAHHVLKLIHLCVLQ*QLANYDQHPSLLEA
Trigger: TGCTTCGAGCAGTGAAGGATGCTGGTCATAGTTTGCAAGCTGTCATTGCAGGACACACAAATGGATCAGTTTCAGAACATGGTGGGCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS TCA 90 bp AAGCTCAGATGTATTCTGCAGAGCAGAGACAGTGTTCAGAGCTATTaGGACTTGCTCCTGTGTCAGAAAGCTAAGTCCACAGAGACTCTG +
Preference number: 5 (lower is better)
Translates to: KLRCILQSRDSVQSY*DLLLCQKAKSTETL
Trigger: CAGAGTCTCTGTGGACTTAGCTTTCTGACACAGGAGCAAGTCTCAATAGCTCTGAACACTGTCTCTGCTCTGCAGAATACATCTGAGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS TCA 90 bp ACTGGAAAGATTCCTGCTAAGACGTTCACAGTCCAACTGATCAGGTaGGAACCATATCTTTCCAATCTCCTGGTAGTGGCGATGGACCAA +
Preference number: 5 (lower is better)
Translates to: TGKIPAKTFTVQLIR*EPYLSNLLVVAMDQ
Trigger: TTGGTCCATCGCCACTACCAGGAGATTGGAAAGATATGGTTCTCACCTGATCAGTTGGACTGTGAACGTCTTAGCAGGAATCTTTCCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS GCA 90 bp GCTGAGGCTAGCAACGACATCCAACAGAGACTTCAGCAAGCCATTTaGTTCAGAGGGTATCAGAGTTTTGTAAATGAGGTTCCTCAGGTT +
Preference number: 5 (lower is better)
Translates to: AEASNDIQQRLQQAI*FRGYQSFVNEVPQV
Trigger: AACCTGAGGAACCTCATTTACAAAACTCTGATACCCTCTGAAGCAAATGGCTTGCTGAAGTCTCTGTTGGATGTCGTTGCTAGCCTCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS GCA 90 bp GGGGATGGTATAGGTCAGCTCACCTCCACAGCTATCTTTGAGGAATaGTTGTGGAATATAGATCTGTATCAAGGATGTAACACGAGCCAC +
Preference number: 5 (lower is better)
Translates to: GDGIGQLTSTAIFEE*LWNIDLYQGCNTSH
Trigger: GTGGCTCGTGTTACATCCTTGATACAGATCTATATTCCACAAGCATTCCTCAAAGATAGCTGTGGAGGTGAGCTGACCTATACCATCCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS CCA 90 bp ATCTCCAATAGCTCCGAGAGAATGGAATTCCAGTCTGCTAGGTCATaGACTGCACAGGCCAATCTCCTGGTTATTTCCACTGCATACTTT +
Preference number: 5 (lower is better)
Translates to: ISNSSERMEFQSARS*TAQANLLVISTAYF
Trigger: AAAGTATGCAGTGGAAATAACCAGGAGATTGGCCTGTGCAGTCCATGACCTAGCAGACTGGAATTCCATTCTCTCGGAGCTATTGGAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS CCA 90 bp CTACTGAAAAGAAATCCAAATGGCCTTCGGCATCAGTTTTCACTGTaGTCTCCCATGGATGGGTGTGAGATAAATCCTTCAGGACTCCAG +
Preference number: 5 (lower is better)
Translates to: LLKRNPNGLRHQFSL*SPMDGCEINPSGLQ
Trigger: CTGGAGTCCTGAAGGATTTATCTCACACCCATCCATGGGAGACCACAGTGAAAACTGATGCCGAAGGCCATTTGGATTTCTTTTCAGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS CCA 90 bp GAAATGTTGGCTTCTAAGATGCTGTGGATGGTTTCCTCAGAGATGTaGAAGAAGGAGCGAAGGTCCTCAGTGAATTTGGTGATGTTCCTC +
Preference number: 5 (lower is better)
Translates to: EMLASKMLWMVSSEM*KKERRSSVNLVMFL
Trigger: GAGGAACATCACCAAATTCACTGAGGACCTTCGCTCCTTCTTCCACATCTCTGAGGAAACCATCCACAGCATCTTAGAAGCCAACATTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR CAA 90 bp GGGGCCATTTGCTCCCAACACTGTCCATTTAATTACAGGCAACTGTGTGTGTTTGTGTCTGGGAGGTTCTaGAAAACGAAGTACTGTCAG +
Preference number: 5 (lower is better)
Translates to: GAICSQHCPFNYRQLCVFVSGRF*KTKYCQ
Trigger: CTGACAGTACTTCGTTTTCAAGAACCTCCCAGACAC...AAACACACACAGTTGCCTGTAATTAAATGGACAGTGTTGGGAGCAAATGGCCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR CAA 90 bp CACTGTCCATTTAATTACAGGCAACTGTGTGTGTTTAAACCCAGGATATTAGGCGCTGCGAACAGCTGCTaGAGGCCTGTCAAACTAGCA +
Preference number: 5 (lower is better)
Translates to: HCPFNYRQLCVFKPRILGAANSC*RPVKLA
Trigger: TGCTAGTTTGACAGGCCTCAAGCAGCTGTTCGCAGC...GCCTAATATCCTGGGTTTAAACACACACAGTTGCCTGTAATTAAATGGACAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR CAA 90 bp TATAATCCTTCTAGAACTAAACTTTGCCTGGGGCCATTTGCTCCCAACACTGTCCAGGAGTTCCAGAAGTaGAGGAAGTTGCACAGTGGT +
Preference number: 5 (lower is better)
Translates to: YNPSRTKLCLGPFAPNTVQEFQK*RKLHSG
Trigger: ACCACTGTGCAACTTCCTCAACTTCTGGAACTCCTG...GACAGTGTTGGGAGCAAATGGCCCCAGGCAAAGTTTAGTTCTAGAAGGATTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR CAA 90 bp CTGAGTCTGTCACAGACAACCTGTCACCTACCTGGTGTGGCAATCAGCAGAAAAACAATTTTGGCTAGGTaGAGAAGTCTAACCATGGAG +
Preference number: 5 (lower is better)
Translates to: LSLSQTTCHLPGVAISRKTILAR*RSLTME
Trigger: CTCCATGGTTAGACTTCTCAACCTAGCCAAAATTGT...TTTTCTGCTGATTGCCACACCAGGTAGGTGACAGGTTGTCTGTGACAGACTCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR CAA 90 bp CTGAGTCTGTCACAGACAACCTGTCACCTACCTGGTGTGGCAATCAGCAGAAAAAGGTCCTCAGTGAATTaGGTGATGTTCCTCATCAAA +
Preference number: 5 (lower is better)
Translates to: LSLSQTTCHLPGVAISRKRSSVN*VMFLIK
Trigger: TTTGATGAGGAACATCACCAAATTCACTGAGGACCT...TTTTCTGCTGATTGCCACACCAGGTAGGTGACAGGTTGTCTGTGACAGACTCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR CAA 90 bp TTCCTGCACTTCTTAGTTTGGACTCTTGTCAGTTCATGGCTGAGTCTGTCACAGACTTCAGCAAGCCATTaGCTTCAGAGGGTATCAGAG +
Preference number: 5 (lower is better)
Translates to: FLHFLVWTLVSSWLSLSQTSASH*LQRVSE
Trigger: CTCTGATACCCTCTGAAGCAAATGGCTTGCTGAAGT...CTGTGACAGACTCAGCCATGAACTGACAAGAGTCCAAACTAAGAAGTGCAGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR CAA 90 bp CACTGTCCATTTAATTACAGGCAACTGTGTGTGTTTAAACCCAGGATATTAGGCGTTCCAGGGACCAAGTaGCTGAAGTACCATCCACCC +
Preference number: 5 (lower is better)
Translates to: HCPFNYRQLCVFKPRILGVPGTK*LKYHPP
Trigger: GGGTGGATGGTACTTCAGCAACTTGGTCCCTGGAAC...GCCTAATATCCTGGGTTTAAACACACACAGTTGCCTGTAATTAAATGGACAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR CAA 90 bp CACTGTCCATTTAATTACAGGCAACTGTGTGTGTTTAAACCCAGGATATTAGGCTCACGCACAGTGAGGTaGTCCAGGAGAACATCCTGC +
Preference number: 5 (lower is better)
Translates to: HCPFNYRQLCVFKPRILGSRTVR*SRRTSC
Trigger: GCAGGATGTTCTCCTGGACAACCTCACTGTGCGTGA...GCCTAATATCCTGGGTTTAAACACACACAGTTGCCTGTAATTAAATGGACAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR CAA 90 bp GCTATGTATAATCCTTCTAGAACTAAACTTTGCCTGGGGCCATTTGCTCCCAACCGACCTTCTCGGTACTaGAGTAGAATGTCCCAGAGA +
Preference number: 5 (lower is better)
Translates to: AMYNPSRTKLCLGPFAPNRPSRY*SRMSQR
Trigger: TCTCTGGGACATTCTACTCAAGTACCGAGAAGGTCG...GTTGGGAGCAAATGGCCCCAGGCAAAGTTTAGTTCTAGAAGGATTATACATAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS TCA 90 bp GCCTTCTCTCCATCAGACCACATATGCTCTTCCAATATGATGCAGTaGAGGGGAAATACCATGGTTTCCCTAAACCAAAAGTTCCAGGGA +
Preference number: 5 (lower is better)
Translates to: AFSPSDHICSSNMMQ*RGNTMVSLNQKFQG
Trigger: TCCCTGGAACTTTTGGTTTAGGGAAACCATGGTATTTCCCCTTCACTGCATCATATTGGAAGAGCATATGTGGTCTGATGGAGAGAAGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS GCA 90 bp TGTTTTTGTGGCTCAGAAAGGGCAGAGAAAAGCTCAGATGTATTCTaGAGAGCAGAGACAGTGTTCAGAGCTATTGAGACTTGCTCCTGT +
Preference number: 5 (lower is better)
Translates to: CFCGSERAEKSSDVF*RAETVFRAIETCSC
Trigger: ACAGGAGCAAGTCTCAATAGCTCTGAACACTGTCTCTGCTCTGCAGAATACATCTGAGCTTTTCTCTGCCCTTTCTGAGCCACAAAAACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS GCA 90 bp GTCTTCGACCTTAGGGTTTTTCTCAAGCCTGAAAGTTGTGTAGTTTaGGCACCAAACCCTGGTAAGGCACATCAAAGCTTCTGGAACAAT +
Preference number: 5 (lower is better)
Translates to: VFDLRVFLKPESCVV*APNPGKAHQSFWNN
Trigger: ATTGTTCCAGAAGCTTTGATGTGCCTTACCAGGGTTTGGTGCGCAAACTACACAACTTTCAGGCTTGAGAAAAACCCTAAGGTCGAAGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS GCA 90 bp AAGTTAATTAGCCAGTATGTCCTGTGTCCAAGGCCACTTATATGTTaGAGTCTTTTAGCTCCAGTCACTCTGTCCCTCACCACAGAGCTA +
Preference number: 5 (lower is better)
Translates to: KLISQYVLCPRPLIC*SLLAPVTLSLTTEL
Trigger: TAGCTCTGTGGTGAGGGACAGAGTGACTGGAGCTAAAAGACTGCAACATATAAGTGGCCTTGGACACAGGACATACTGGCTAATTAACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS CCA 90 bp AGAGAAGCTTCATTACAGACTGGAAAGAGGCGAAAGCTGAACTTCTaGTTTGTCCCTTTGATGAAACCTGTTGGAAGTCTGGCATGTCCA +
Preference number: 5 (lower is better)
Translates to: REASLQTGKRRKLNF*FVPLMKPVGSLACP
Trigger: TGGACATGCCAGACTTCCAACAGGTTTCATCAAAGGGACAAACCAGAAGTTCAGCTTTCGCCTCTTTCCAGTCTGTAATGAAGCTTCTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR CAA 90 bp TATAATCCTTCTAGAACTAAACTTTGCCTGGGGCCATTTGCTCCCAACACTGTCCAGTGTTCAGAGCTATaGAGACTTGCTCCTGTGTCA +
Preference number: 5 (lower is better)
Translates to: YNPSRTKLCLGPFAPNTVQCSEL*RLAPVS
Trigger: TGACACAGGAGCAAGTCTCAATAGCTCTGAACACTG...GACAGTGTTGGGAGCAAATGGCCCCAGGCAAAGTTTAGTTCTAGAAGGATTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR CAA 90 bp TCCTCTTGGTTCCTGCACTTCTTAGTTTGGACTCTTGTCAGTTCATGGCTGAGTATCCAGTTCTTGTTTTaGTGGCTCAGAAAGGGCAGA +
Preference number: 5 (lower is better)
Translates to: SSWFLHFLVWTLVSSWLSIQFLF*WLRKGR
Trigger: TCTGCCCTTTCTGAGCCACAAAAACAAGAACTGGAT...ACTCAGCCATGAACTGACAAGAGTCCAAACTAAGAAGTGCAGGAACCAAGAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR CAA 90 bp ATAATCCTTCTAGAACTAAACTTTGCCTGGGGCCATTTGCTCCCAACACTGTCCTCCCAAGAGCCTCTGTaGTCTCCGATAAAAACGAAA +
Preference number: 5 (lower is better)
Translates to: IILLELNFAWGHLLPTLSSQEPL*SPIKTK
Trigger: TTTCGTTTTTATCGGAGACAACAGAGGCTCTTGGGA...GGACAGTGTTGGGAGCAAATGGCCCCAGGCAAAGTTTAGTTCTAGAAGGATTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR CAA 90 bp GCTATGTATAATCCTTCTAGAACTAAACTTTGCCTGGGGCCATTTGCTCCCAACTTGAAGTGCTTCCAGTaGGACTGGGAAGCAACATTG +
Preference number: 5 (lower is better)
Translates to: AMYNPSRTKLCLGPFAPNLKCFQ*DWEATL
Trigger: CAATGTTGCTTCCCAGTCCAACTGGAAGCACTTCAA...GTTGGGAGCAAATGGCCCCAGGCAAAGTTTAGTTCTAGAAGGATTATACATAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR CAA 90 bp CTGAGTCTGTCACAGACAACCTGTCACCTACCTGGTGTGGCAATCAGCAGAAAAGAATTTTGTGGAATATaGAAGTGGACAGCAGGCATT +
Preference number: 5 (lower is better)
Translates to: LSLSQTTCHLPGVAISRKEFCGI*KWTAGI
Trigger: AATGCCTGCTGTCCACTTCAATATTCCACAAAATTC...TTTTCTGCTGATTGCCACACCAGGTAGGTGACAGGTTGTCTGTGACAGACTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR CAA 90 bp TTCCTGCACTTCTTAGTTTGGACTCTTGTCAGTTCATGGCTGAGTCTGTCACAGCAGAAGTTGAGGAAGTaGCACAGTGGTGTTTTGAAG +
Preference number: 5 (lower is better)
Translates to: FLHFLVWTLVSSWLSLSQQKLRK*HSGVLK
Trigger: CTTCAAAACACCACTGTGCAACTTCCTCAACTTCTG...CTGTGACAGACTCAGCCATGAACTGACAAGAGTCCAAACTAAGAAGTGCAGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR CAA 90 bp TTCCTGCACTTCTTAGTTTGGACTCTTGTCAGTTCATGGCTGAGTCTGTCACAGGACCTGAGATTTTGGTaGAATTTGGAGAGGTCCTCA +
Preference number: 5 (lower is better)
Translates to: FLHFLVWTLVSSWLSLSQDLRFW*NLERSS
Trigger: TGAGGACCTCTCCAAATTCAACCAAAATCTCAGGTC...CTGTGACAGACTCAGCCATGAACTGACAAGAGTCCAAACTAAGAAGTGCAGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR CAA 90 bp GCTATGTATAATCCTTCTAGAACTAAACTTTGCCTGGGGCCATTTGCTCCCAACAGCAGGCCCCAGAAGTaGAATGTAAGACAGTGTCAA +
Preference number: 5 (lower is better)
Translates to: AMYNPSRTKLCLGPFAPNSRPQK*NVRQCQ
Trigger: TTGACACTGTCTTACATTCAACTTCTGGGGCCTGCT...GTTGGGAGCAAATGGCCCCAGGCAAAGTTTAGTTCTAGAAGGATTATACATAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR CAA 90 bp TGGACTGGCATAAAGCAGGAATGCATATGGCAATTTCTTTATATCACACCATACACACGAGCCACATCCTaGGGCTCCTGTGTTTCTAGG +
Preference number: 5 (lower is better)
Translates to: WTGIKQECIWQFLYITPYTRATS*GSCVSR
Trigger: CCTAGAAACACAGGAGCCCAAGGATGTGGCTCGTGT...GTATGGTGTGATATAAAGAAATTGCCATATGCATTCCTGCTTTATGCCAGTCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR CAA 90 bp CACTGTCCATTTAATTACAGGCAACTGTGTGTGTTTAAACCCAGGATATTAGGCCACCAGCGCTTTTATTaGGACACTTCAGGCAGCCAC +
Preference number: 5 (lower is better)
Translates to: HCPFNYRQLCVFKPRILGHQRFY*DTSGSH
Trigger: GTGGCTGCCTGAAGTGTCCAAATAAAAGCGCTGGTG...GCCTAATATCCTGGGTTTAAACACACACAGTTGCCTGTAATTAAATGGACAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR CAA 90 bp TCCTCTTGGTTCCTGCACTTCTTAGTTTGGACTCTTGTCAGTTCATGGCTGAGTGAGTCTACAGTAGTATaGAAGATGTTCCCAGCCAGT +
Preference number: 5 (lower is better)
Translates to: SSWFLHFLVWTLVSSWLSESTVV*KMFPAS
Trigger: ACTGGCTGGGAACATCTTCAATACTACTGTAGACTC...ACTCAGCCATGAACTGACAAGAGTCCAAACTAAGAAGTGCAGGAACCAAGAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS TCA 90 bp GCTGGTGAAGGCTTTCCAATTTTGATATCACATCCTCAGTCTTATTaGGATCCATTGTTAGAAAACCGGAGCCATAAGAGGAACCTGGGG +
Preference number: 5 (lower is better)
Translates to: AGEGFPILISHPQSY*DPLLENRSHKRNLG
Trigger: CCCCAGGTTCCTCTTATGGCTCCGGTTTTCTAACAATGGATCTCAATAAGACTGAGGATGTGATATCAAAATTGGAAAGCCTTCACCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS TCA 90 bp AGGACAGAGTTCTGGGATGCTGCCATTACCTTGAATTCCAGAAGATaGCATGAAGAGCAGTACCTTATGCCAAAATCCCTGCAGAGTTTT +
Preference number: 5 (lower is better)
Translates to: RTEFWDAAITLNSRR*HEEQYLMPKSLQSF
Trigger: AAAACTCTGCAGGGATTTTGGCATAAGGTACTGCTCTTCATGTCATCTTCTGGAATTCAAGGTAATGGCAGCATCCCAGAACTCTGTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS GCA 90 bp CACATCTCAAAAACACTTTGCTCAGCTTGTGGGACTTCCTGCCAGTaGTCAATCGATACAAATAATGCCTTCAGGAATCTCTGGAGGTAT +
Preference number: 5 (lower is better)
Translates to: HISKTLCSACGTSCQ*SIDTNNAFRNLWRY
Trigger: ATACCTCCAGAGATTCCTGAAGGCATTATTTGTATCGATTGAGCACTGGCAGGAAGTCCCACAAGCTGAGCAAAGTGTTTTTGAGATGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS GCA 90 bp GCTTCCACGTGGTTAAACATCTTATCTAACATCCGTCCATATGTCTaGAGATCTTCAGTGAGCTTGTCCATGTCAATATGCAACTGGCTC +
Preference number: 5 (lower is better)
Translates to: ASTWLNILSNIRPYV*RSSVSLSMSICNWL
Trigger: GAGCCAGTTGCATATTGACATGGACAAGCTCACTGAAGATCTGCAGACATATGGACGGATGTTAGATAAGATGTTTAACCACGTGGAAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS GCA 90 bp TGTCTCAAGGAACTGTTGAATATAATACTGGCCAAGAAACTATTCTaGTGCATGAGTTCATGTGCCTTGGTCTCCAGGGTGTCAACAGTC +
Preference number: 5 (lower is better)
Translates to: CLKELLNIILAKKLF*CMSSCALVSRVSTV
Trigger: GACTGTTGACACCCTGGAGACCAAGGCACATGAACTCATGCAGCAGAATAGTTTCTTGGCCAGTATTATATTCAACAGTTCCTTGAGACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS GCA 90 bp AACACCATCATGTCTCCTCCAGTTCTTCCTTCAAGCACCCTCATTTaGTCTGTTTCAACATCTATGTCCTTAGCAGGCTTAACTATGTCC +
Preference number: 5 (lower is better)
Translates to: NTIMSPPVLPSSTLI*SVSTSMSLAGLTMS
Trigger: GGACATAGTTAAGCCTGCTAAGGACATAGATGTTGAAACAGAGCAAATGAGGGTGCTTGAAGGAAGAACTGGAGGAGACATGATGGTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS CCA 90 bp GGTATAGGTCAGCTCACCTCCACAGCTATCTTTGAGGAATGCTTGTaGAATATAGATCTGTATCAAGGATGTAACACGAGCCACATCCTT +
Preference number: 5 (lower is better)
Translates to: GIGQLTSTAIFEECL*NIDLYQGCNTSHIL
Trigger: AAGGATGTGGCTCGTGTTACATCCTTGATACAGATCTATATTCCACAAGCATTCCTCAAAGATAGCTGTGGAGGTGAGCTGACCTATACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR CAA 90 bp GGGGCCATTTGCTCCCAACACTGTCCATTTAATTACAGGCAACTGTGTGTGTTTGTCATCAGATGCAGTTaGGAACCTAGACAAACGAAA +
Preference number: 5 (lower is better)
Translates to: GAICSQHCPFNYRQLCVFVIRCS*EPRQTK
Trigger: TTTCGTTTGTCTAGGTTCCAAACTGCATCTGATGAC...AAACACACACAGTTGCCTGTAATTAAATGGACAGTGTTGGGAGCAAATGGCCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR CAA 90 bp TCCTCTTGGTTCCTGCACTTCTTAGTTTGGACTCTTGTCAGTTCATGGCTGAGTAATGCAGAGCTCATTTaGTCCCCCATATCCTTAAAG +
Preference number: 5 (lower is better)
Translates to: SSWFLHFLVWTLVSSWLSNAELI*SPISLK
Trigger: CTTTAAGGATATGGGGGACAAAATGAGCTCTGCATT...ACTCAGCCATGAACTGACAAGAGTCCAAACTAAGAAGTGCAGGAACCAAGAGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR CAA 90 bp GGGGCCATTTGCTCCCAACACTGTCCATTTAATTACAGGCAACTGTGTGTGTTTGACTGGGAAGCAACATaGAGATCTTCTGTTAAGTTG +
Preference number: 5 (lower is better)
Translates to: GAICSQHCPFNYRQLCVFDWEAT*RSSVKL
Trigger: CAACTTAACAGAAGATCTCAATGTTGCTTCCCAGTC...AAACACACACAGTTGCCTGTAATTAAATGGACAGTGTTGGGAGCAAATGGCCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR CAA 90 bp CTGAGTCTGTCACAGACAACCTGTCACCTACCTGGTGTGGCAATCAGCAGAAAAAAGCCAACATCAAAATaGCCTTCTCTAGATTGGTTT +
Preference number: 5 (lower is better)
Translates to: LSLSQTTCHLPGVAISRKKPTSK*PSLDWF
Trigger: AAACCAATCTAGAGAAGGCAATTTTGATGTTGGCTT...TTTTCTGCTGATTGCCACACCAGGTAGGTGACAGGTTGTCTGTGACAGACTCAG
44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR CAA 90 bp TATAATCCTTCTAGAACTAAACTTTGCCTGGGGCCATTTGCTCCCAACACTGTCCATCTCAAAAACACTTaGCTCAGCTTGTGGGACTTC +
Preference number: 5 (lower is better)
Translates to: YNPSRTKLCLGPFAPNTVHLKNT*LSLWDF
Trigger: GAAGTCCCACAAGCTGAGCAAAGTGTTTTTGAGATG...GACAGTGTTGGGAGCAAATGGCCCCAGGCAAAGTTTAGTTCTAGAAGGATTATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR CAA 90 bp GCTATGTATAATCCTTCTAGAACTAAACTTTGCCTGGGGCCATTTGCTCCCAACCGATGGCTGGAAGCATaGTCCAAGATGCTTTTAAAG +
Preference number: 5 (lower is better)
Translates to: AMYNPSRTKLCLGPFAPNRWLEA*SKMLLK
Trigger: CTTTAAAAGCATCTTGGACAATGCTTCCAGCCATCG...GTTGGGAGCAAATGGCCCCAGGCAAAGTTTAGTTCTAGAAGGATTATACATAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR CAA 90 bp ATAATCCTTCTAGAACTAAACTTTGCCTGGGGCCATTTGCTCCCAACACTGTCCTTCTGGTTTGTCCCTTaGATGAAACCTGTTGGAAGT +
Preference number: 5 (lower is better)
Translates to: IILLELNFAWGHLLPTLSFWFVP*MKPVGS
Trigger: ACTTCCAACAGGTTTCATCAAAGGGACAAACCAGAA...GGACAGTGTTGGGAGCAAATGGCCCCAGGCAAAGTTTAGTTCTAGAAGGATTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR CAA 90 bp GCTATGTATAATCCTTCTAGAACTAAACTTTGCCTGGGGCCATTTGCTCCCAACCAACTGGTTGAACATTaGACCATTTCCACTTCCCTG +
Preference number: 5 (lower is better)
Translates to: AMYNPSRTKLCLGPFAPNQLVEH*TISTSL
Trigger: CAGGGAAGTGGAAATGGTCAAATGTTCAACCAGTTG...GTTGGGAGCAAATGGCCCCAGGCAAAGTTTAGTTCTAGAAGGATTATACATAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR CAA 90 bp ATAATCCTTCTAGAACTAAACTTTGCCTGGGGCCATTTGCTCCCAACACTGTCCAGATCTTCAGTGAGCTaGTCCATGTCAATATGCAAC +
Preference number: 5 (lower is better)
Translates to: IILLELNFAWGHLLPTLSRSSVS*SMSICN
Trigger: GTTGCATATTGACATGGACAAGCTCACTGAAGATCT...GGACAGTGTTGGGAGCAAATGGCCCCAGGCAAAGTTTAGTTCTAGAAGGATTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR CAA 90 bp CACTGTCCATTTAATTACAGGCAACTGTGTGTGTTTAAACCCAGGATATTAGGCTGCTGTGAGAGCCCTTaGTTGCCAAAGTCCTCATTG +
Preference number: 5 (lower is better)
Translates to: HCPFNYRQLCVFKPRILGCCESP*LPKSSL
Trigger: CAATGAGGACTTTGGCAACAAAGGGCTCTCACAGCA...GCCTAATATCCTGGGTTTAAACACACACAGTTGCCTGTAATTAAATGGACAGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR CAA 90 bp CTGAGTCTGTCACAGACAACCTGTCACCTACCTGGTGTGGCAATCAGCAGAAAACTTTTTGTTGGTATCTaGCAGAAGCATCAAAAACAC +
Preference number: 5 (lower is better)
Translates to: LSLSQTTCHLPGVAISRKLFVGI*QKHQKH
Trigger: GTGTTTTTGATGCTTCTGCAAGATACCAACAAAAAG...TTTTCTGCTGATTGCCACACCAGGTAGGTGACAGGTTGTCTGTGACAGACTCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR CAA 90 bp GCTATGTATAATCCTTCTAGAACTAAACTTTGCCTGGGGCCATTTGCTCCCAACCCTTCGCCAAAGTCCTaGGTTTTGATGTGTTTGTCT +
Preference number: 5 (lower is better)
Translates to: AMYNPSRTKLCLGPFAPNPSPKS*VLMCLS
Trigger: AGACAAACACATCAAAACCAAGGACTTTGGCGAAGG...GTTGGGAGCAAATGGCCCCAGGCAAAGTTTAGTTCTAGAAGGATTATACATAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR CAA 90 bp GGGGCCATTTGCTCCCAACACTGTCCATTTAATTACAGGCAACTGTGTGTGTTTCAGGGTTATTCCATATaGTCTCCAGTCTACAGCATT +
Preference number: 5 (lower is better)
Translates to: GAICSQHCPFNYRQLCVFQGYSI*SPVYSI
Trigger: AATGCTGTAGACTGGAGACAATATGGAATAACCCTG...AAACACACACAGTTGCCTGTAATTAAATGGACAGTGTTGGGAGCAAATGGCCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR CAA 90 bp TTTGAGATTCTATCCCTCAGAGATTATGCTGAGAACATGAGTTTCCACAAGGCTGAGTTCTATAAGCCCTaGACCCAGGCAGAATTGAGG +
Preference number: 5 (lower is better)
Translates to: FEILSLRDYAENMSFHKAEFYKP*TQAELR
Trigger: CCTCAATTCTGCCTGGGTCAAGGGCTTATAGAACTC...AGCCTTGTGGAAACTCATGTTCTCAGCATAATCTCTGAGGGATAGAATCTCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR CAA 90 bp TGGACTGGCATAAAGCAGGAATGCATATGGCAATTTCTTTATATCACACCATACATCAGAATGCCTGCTTaGCCAGCAGAAGCCAGATCC +
Preference number: 5 (lower is better)
Translates to: WTGIKQECIWQFLYITPYIRMPA*PAEARS
Trigger: GGATCTGGCTTCTGCTGGCAAAGCAGGCATTCTGAT...GTATGGTGTGATATAAAGAAATTGCCATATGCATTCCTGCTTTATGCCAGTCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR CAA 90 bp CACTGTCCATTTAATTACAGGCAACTGTGTGTGTTTAAACCCAGGATATTAGGCCTGGGATGTACTGCTTaGGAATTCCACGGAGTCTAC +
Preference number: 5 (lower is better)
Translates to: HCPFNYRQLCVFKPRILGLGCTA*EFHGVY
Trigger: GTAGACTCCGTGGAATTCCAAAGCAGTACATCCCAG...GCCTAATATCCTGGGTTTAAACACACACAGTTGCCTGTAATTAAATGGACAGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS TCA 90 bp GACAGAAGAATGTTCATCTGTCCATTTTCAAGGGTGTGCAACTTCTaGTCCACCACTAAAAGGTGCTTTGTGAAATTGAAGGCCGTGGTT +
Preference number: 5 (lower is better)
Translates to: DRRMFICPFSRVCNF*STTKRCFVKLKAVV
Trigger: AACCACGGCCTTCAATTTCACAAAGCACCTTTTAGTGGTGGATCAGAAGTTGCACACCCTTGAAAATGGACAGATGAACATTCTTCTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS TCA 90 bp AGAGTTCTGGGATGCTGCCATTACCTTGAATTCCAGAAGATGACATaGAGAGCAGTACCTTATGCCAAAATCCCTGCAGAGTTTTCACAA +
Preference number: 5 (lower is better)
Translates to: RVLGCCHYLEFQKMT*RAVPYAKIPAEFSQ
Trigger: TTGTGAAAACTCTGCAGGGATTTTGGCATAAGGTACTGCTCTTCATGTCATCTTCTGGAATTCAAGGTAATGGCAGCATCCCAGAACTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS TCA 90 bp CTCTGTGACTGTGAAATTGCTAAGAAATGTCATAGCAGGAATCTTTaGCATCCAAACCTCCTCAAGACTTTTGGTCAGCCTGCGTATGTG +
Preference number: 5 (lower is better)
Translates to: LCDCEIAKKCHSRNL*HPNLLKTFGQPAYV
Trigger: CACATACGCAGGCTGACCAAAAGTCTTGAGGAGGTTTGGATGTCAAAGATTCCTGCTATGACATTTCTTAGCAATTTCACAGTCACAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS TCA 90 bp AAGACATTGGTCCGGATTGTATATGTGACGTGGGGTGGCAATTTGTaGGGTGCTGATCTAATGTGTCTATGTCTCAAGGAACTGTTGAAT +
Preference number: 5 (lower is better)
Translates to: KTLVRIVYVTWGGNL*GADLMCLCLKELLN
Trigger: ATTCAACAGTTCCTTGAGACATAGACACATTAGATCAGCACCTCACAAATTGCCACCCCACGTCACATATACAATCCGGACCAATGTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS TCA 90 bp GCCAAAGATGAAGTTCAAGGAGATGTAGGAGATGAAGGCCACATCTaGACTGGAGAAGATTCTGGACATCAGATACATCCATGGAATCAT +
Preference number: 5 (lower is better)
Translates to: AKDEVQGDVGDEGHI*TGEDSGHQIHPWNH
Trigger: ATGATTCCATGGATGTATCTGATGTCCAGAATCTTCTCCAGTTCAGATGTGGCCTTCATCTCCTACATCTCCTTGAACTTCATCTTTGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS CCA 90 bp GTGACAAACCAGGATTTTTCACTCTCAGGAAACGTCAGCAGGAGATaGAGAATTTCTTCATCACATTTTCCAGACAAAGCGATGGTAAGG +
Preference number: 5 (lower is better)
Translates to: VTNQDFSLSGNVSRR*RISSSHFPDKAMVR
Trigger: CCTTACCATCGCTTTGTCTGGAAAATGTGATGAAGAAATTCTCCATCTCCTGCTGACGTTTCCTGAGAGTGAAAAATCCTGGTTTGTCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS CCA 90 bp AAGGGGTCCTACAGGTCTCTCATTCTGAGGCTCTACTTTGTTGTCTaGAGTGATGTAAGACTTTTTGTTGGTATCTTGCAGAAGCATCAA +
Preference number: 5 (lower is better)
Translates to: KGSYRSLILRLYFVV*SDVRLFVGILQKHQ
Trigger: TTGATGCTTCTGCAAGATACCAACAAAAAGTCTTACATCACTCCAGACAACAAAGTAGAGCCTCAGAATGAGAGACCTGTAGGACCCCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR CAA 90 bp TATAATCCTTCTAGAACTAAACTTTGCCTGGGGCCATTTGCTCCCAACACTGTCGTAGCTGAGGAATTCTaGAACAAATCGCAAATCCTG +
Preference number: 5 (lower is better)
Translates to: YNPSRTKLCLGPFAPNTVVAEEF*NKSQIL
Trigger: CAGGATTTGCGATTTGTTCAAGAATTCCTCAGCTAC...GACAGTGTTGGGAGCAAATGGCCCCAGGCAAAGTTTAGTTCTAGAAGGATTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR CAA 90 bp CACTGTCCATTTAATTACAGGCAACTGTGTGTGTTTAAACCCAGGATATTAGGCTCCTGCAATGACAGCTaGCAAACTATGACCAGCATC +
Preference number: 5 (lower is better)
Translates to: HCPFNYRQLCVFKPRILGSCNDS*QTMTSI
Trigger: GATGCTGGTCATAGTTTGCAAGCTGTCATTGCAGGA...GCCTAATATCCTGGGTTTAAACACACACAGTTGCCTGTAATTAAATGGACAGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR CAA 90 bp TTCCTGCACTTCTTAGTTTGGACTCTTGTCAGTTCATGGCTGAGTCTGTCACAGCATGAAACAGTTGCATaGAAAACAAGCTCAGTGAGA +
Preference number: 5 (lower is better)
Translates to: FLHFLVWTLVSSWLSLSQHETVA*KTSSVR
Trigger: TCTCACTGAGCTTGTTTTCAATGCAACTGTTTCATG...CTGTGACAGACTCAGCCATGAACTGACAAGAGTCCAAACTAAGAAGTGCAGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR CAA 90 bp GGGGCCATTTGCTCCCAACACTGTCCATTTAATTACAGGCAACTGTGTGTGTTTTGTGGGAACTATTCCTaGGCAGTCTTTAGAAATGTT +
Preference number: 5 (lower is better)
Translates to: GAICSQHCPFNYRQLCVFCGNYS*AVFRNV
Trigger: AACATTTCTAAAGACTGCCAAGGAATAGTTCCCACA...AAACACACACAGTTGCCTGTAATTAAATGGACAGTGTTGGGAGCAAATGGCCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR CAA 90 bp TCCTCTTGGTTCCTGCACTTCTTAGTTTGGACTCTTGTCAGTTCATGGCTGAGTTCAGCAAAGTCTTCCTaGGTGATTTTGAACATGGTT +
Preference number: 5 (lower is better)
Translates to: SSWFLHFLVWTLVSSWLSSAKSS*VILNMV
Trigger: AACCATGTTCAAAATCACCAAGGAAGACTTTGCTGA...ACTCAGCCATGAACTGACAAGAGTCCAAACTAAGAAGTGCAGGAACCAAGAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR CAA 90 bp GCTATGTATAATCCTTCTAGAACTAAACTTTGCCTGGGGCCATTTGCTCCCAACCCAGAGAGTTCTCTGTaGTCTAATGAAAATGAGCTC +
Preference number: 5 (lower is better)
Translates to: AMYNPSRTKLCLGPFAPNPESSL*SNENEL
Trigger: GAGCTCATTTTCATTAGACAACAGAGAACTCTCTGG...GTTGGGAGCAAATGGCCCCAGGCAAAGTTTAGTTCTAGAAGGATTATACATAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR CAA 90 bp ATAATCCTTCTAGAACTAAACTTTGCCTGGGGCCATTTGCTCCCAACACTGTCCAGAGGGAATGAACTGTaGACATCAGAAAACAAGTCA +
Preference number: 5 (lower is better)
Translates to: IILLELNFAWGHLLPTLSRGNEL*TSENKS
Trigger: TGACTTGTTTTCTGATGTCAACAGTTCATTCCCTCT...GGACAGTGTTGGGAGCAAATGGCCCCAGGCAAAGTTTAGTTCTAGAAGGATTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR CAA 90 bp GCTATGTATAATCCTTCTAGAACTAAACTTTGCCTGGGGCCATTTGCTCCCAACCAGCTGCTGGAAAACTaGACACATCTCAAAAACACT +
Preference number: 5 (lower is better)
Translates to: AMYNPSRTKLCLGPFAPNQLLEN*THLKNT
Trigger: AGTGTTTTTGAGATGTGTCAAGTTTTCCAGCAGCTG...GTTGGGAGCAAATGGCCCCAGGCAAAGTTTAGTTCTAGAAGGATTATACATAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR CAA 90 bp TTCCTGCACTTCTTAGTTTGGACTCTTGTCAGTTCATGGCTGAGTCTGTCACAGGAGTCATGCGGAATGTaGAACTTCTCTTTGTTATCT +
Preference number: 5 (lower is better)
Translates to: FLHFLVWTLVSSWLSLSQESCGM*NFSLLS
Trigger: AGATAACAAAGAGAAGTTCAACATTCCGCATGACTC...CTGTGACAGACTCAGCCATGAACTGACAAGAGTCCAAACTAAGAAGTGCAGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR CAA 90 bp TGGACTGGCATAAAGCAGGAATGCATATGGCAATTTCTTTATATCACACCATACACACAGGAAGAGAGATaGGCCAACATACCACCCAAG +
Preference number: 5 (lower is better)
Translates to: WTGIKQECIWQFLYITPYTQEER*ANIPPK
Trigger: CTTGGGTGGTATGTTGGCCAATCTCTCTTCCTGTGT...GTATGGTGTGATATAAAGAAATTGCCATATGCATTCCTGCTTTATGCCAGTCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR CAA 90 bp TCCTCTTGGTTCCTGCACTTCTTAGTTTGGACTCTTGTCAGTTCATGGCTGAGTATGCTGTATAAGACATaGGTCCGGATTGTATATGTG +
Preference number: 5 (lower is better)
Translates to: SSWFLHFLVWTLVSSWLSMLYKT*VRIVYV
Trigger: CACATATACAATCCGGACCAATGTCTTATACAGCAT...ACTCAGCCATGAACTGACAAGAGTCCAAACTAAGAAGTGCAGGAACCAAGAGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR CAA 90 bp ATAATCCTTCTAGAACTAAACTTTGCCTGGGGCCATTTGCTCCCAACACTGTCCAAAAAGAAGCCGACATaGTTTAGGAACAAGTCACTG +
Preference number: 5 (lower is better)
Translates to: IILLELNFAWGHLLPTLSKKKPT*FRNKSL
Trigger: CAGTGACTTGTTCCTAAACAATGTCGGCTTCTTTTT...GGACAGTGTTGGGAGCAAATGGCCCCAGGCAAAGTTTAGTTCTAGAAGGATTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS TCA 90 bp GTCCCCCTCTTGCCATCAGGGACCAGGCTTGAAGTTCTAAAAAGTTaGAAATTGAAAGTAACTGCTGACAGTGAGATACTTCAGATATCA +
Preference number: 5 (lower is better)
Translates to: VPLLPSGTRLEVLKS*KLKVTADSEILQIS
Trigger: TGATATCTGAAGTATCTCACTGTCAGCAGTTACTTTCAATTTTCAACTTTTTAGAACTTCAAGCCTGGTCCCTGATGGCAAGAGGGGGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS TCA 90 bp GGTCCGGATTGTATATGTGACGTGGGGTGGCAATTTGTGAGGTGCTaGTCTAATGTGTCTATGTCTCAAGGAACTGTTGAATATAATACT +
Preference number: 5 (lower is better)
Translates to: GPDCICDVGWQFVRC*SNVSMSQGTVEYNT
Trigger: AGTATTATATTCAACAGTTCCTTGAGACATAGACACATTAGATCAGCACCTCACAAATTGCCACCCCACGTCACATATACAATCCGGACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS TCA 90 bp CTCTCTCAATCATGTCTTGAAGTGGGACAAAAATGTAGTTATATTTaGATCCGCCGGCTGGTAGATTCTGAGGATGAAACTTCCAGGAAG +
Preference number: 5 (lower is better)
Translates to: LSQSCLEVGQKCSYI*IRRLVDSEDETSRK
Trigger: CTTCCTGGAAGTTTCATCCTCAGAATCTACCAGCCGGCGGATTCAAATATAACTACATTTTTGTCCCACTTCAAGACATGATTGAGAGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS TCA 90 bp TTCCAGAAATGTGATGAAAAAGACTCCTTGTCCAAAGGCTGTGGTTaGAAGCAAGCACAGAAGAGTCTGAATAGCGAAACTGAGTTGGTT +
Preference number: 5 (lower is better)
Translates to: FQKCDEKDSLSKGCG*KQAQKSLNSETELV
Trigger: AACCAACTCAGTTTCGCTATTCAGACTCTTCTGTGCTTGCTTTCAACCACAGCCTTTGGACAAGGAGTCTTTTTCATCACATTTCTGGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR CAA 90 bp TTCCTGCACTTCTTAGTTTGGACTCTTGTCAGTTCATGGCTGAGTCTGTCACAGGTTTTTGTAAGTTCTTaGCCTTGTCCATGGTTTCAA +
Preference number: 5 (lower is better)
Translates to: FLHFLVWTLVSSWLSLSQVFVSS*PCPWFQ
Trigger: TTGAAACCATGGACAAGGCAAAGAACTTACAAAAAC...CTGTGACAGACTCAGCCATGAACTGACAAGAGTCCAAACTAAGAAGTGCAGGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR CAA 90 bp TCCTCTTGGTTCCTGCACTTCTTAGTTTGGACTCTTGTCAGTTCATGGCTGAGTATAGGAATGGAACAATaGGGAGAAAGTAAAGCGTTT +
Preference number: 5 (lower is better)
Translates to: SSWFLHFLVWTLVSSWLSIGMEQ*GESKAF
Trigger: AAACGCTTTACTTTCTCCCAATTGTTCCATTCCTAT...ACTCAGCCATGAACTGACAAGAGTCCAAACTAAGAAGTGCAGGAACCAAGAGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR CAA 90 bp TATAATCCTTCTAGAACTAAACTTTGCCTGGGGCCATTTGCTCCCAACACTGTCGTTTCTTTCAGCTCCTaGATGATGCTTGCAAATTTG +
Preference number: 5 (lower is better)
Translates to: YNPSRTKLCLGPFAPNTVVSFSS*MMLANL
Trigger: CAAATTTGCAAGCATCATCAAGGAGCTGAAAGAAAC...GACAGTGTTGGGAGCAAATGGCCCCAGGCAAAGTTTAGTTCTAGAAGGATTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR CAA 90 bp TCCTCTTGGTTCCTGCACTTCTTAGTTTGGACTCTTGTCAGTTCATGGCTGAGTAGATCTTCTGTTAAGTaGGTAATGATCATGTCTACC +
Preference number: 5 (lower is better)
Translates to: SSWFLHFLVWTLVSSWLSRSSVK*VMIMST
Trigger: GGTAGACATGATCATTACCAACTTAACAGAAGATCT...ACTCAGCCATGAACTGACAAGAGTCCAAACTAAGAAGTGCAGGAACCAAGAGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR CAA 90 bp CACTGTCCATTTAATTACAGGCAACTGTGTGTGTTTAAACCCAGGATATTAGGCATATTGACCCCCAAGTaGTCAATACCTGATCTGCTG +
Preference number: 5 (lower is better)
Translates to: HCPFNYRQLCVFKPRILGILTPK*SIPDLL
Trigger: CAGCAGATCAGGTATTGACAACTTGGGGGTCAATAT...GCCTAATATCCTGGGTTTAAACACACACAGTTGCCTGTAATTAAATGGACAGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR CAA 90 bp TTTGAGATTCTATCCCTCAGAGATTATGCTGAGAACATGAGTTTCCACAAGGCTTCATCAAGAGTTTTGTaGACTTGCTGCTGTAGCTCC +
Preference number: 5 (lower is better)
Translates to: FEILSLRDYAENMSFHKASSRVL*TCCCSS
Trigger: GGAGCTACAGCAGCAAGTCAACAAAACTCTTGATGA...AGCCTTGTGGAAACTCATGTTCTCAGCATAATCTCTGAGGGATAGAATCTCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR CAA 90 bp TTTGAGATTCTATCCCTCAGAGATTATGCTGAGAACATGAGTTTCCACAAGGCTCTCTTGTGTTATTGTTaGCCAGAGGTACCGCTTAGA +
Preference number: 5 (lower is better)
Translates to: FEILSLRDYAENMSFHKALLCYC*PEVPLR
Trigger: TCTAAGCGGTACCTCTGGCAAACAATAACACAAGAG...AGCCTTGTGGAAACTCATGTTCTCAGCATAATCTCTGAGGGATAGAATCTCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS TCA 90 bp TTTATGGTACTAGTAGGACAGAGTTCTGGGATGCTGCCATTACCTTaGATTCCAGAAGATGACATGAAGAGCAGTACCTTATGCCAAAAT +
Preference number: 5 (lower is better)
Translates to: FMVLVGQSSGMLPLP*IPEDDMKSSTLCQN
Trigger: ATTTTGGCATAAGGTACTGCTCTTCATGTCATCTTCTGGAATTCAAGGTAATGGCAGCATCCCAGAACTCTGTCCTACTAGTACCATAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS TCA 90 bp TATCCCAGTTATCTTCCTTTAAGCCATTCCAAAGAGCTTGTAAGGTaGGGTCAATCACCATTTTCAAGAAAGTCTCTCTTTCTGTGCCGT +
Preference number: 5 (lower is better)
Translates to: YPSYLPLSHSKELVR*GQSPFSRKSLFLCR
Trigger: ACGGCACAGAAAGAGAGACTTTCTTGAAAATGGTGATTGACCTCACCTTACAAGCTCTTTGGAATGGCTTAAAGGAAGATAACTGGGATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS CCA 90 bp CTGGGTAAATTAATGAACATGTTAGAATTGCTGAGGAAAGACTCCTaGTCCTTACAGAGAAGCTTCATTACAGACTGGAAAGAGGCGAAA +
Preference number: 5 (lower is better)
Translates to: LGKLMNMLELLRKDS*SLQRSFITDWKEAK
Trigger: TTTCGCCTCTTTCCAGTCTGTAATGAAGCTTCTCTGTAAGGACCAGGAGTCTTTCCTCAGCAATTCTAACATGTTCATTAATTTACCCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR CAA 90 bp TATAATCCTTCTAGAACTAAACTTTGCCTGGGGCCATTTGCTCCCAACACTGTCTGTAAGTTCTTTGCCTaGTCCATGGTTTCAAAAATG +
Preference number: 5 (lower is better)
Translates to: YNPSRTKLCLGPFAPNTVCKFFA*SMVSKM
Trigger: CATTTTTGAAACCATGGACAAGGCAAAGAACTTACA...GACAGTGTTGGGAGCAAATGGCCCCAGGCAAAGTTTAGTTCTAGAAGGATTATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR CAA 90 bp CACTGTCCATTTAATTACAGGCAACTGTGTGTGTTTAAACCCAGGATATTAGGCAAAACACTGGTCTCGTaGAAGAATAGGGTATGGCAT +
Preference number: 5 (lower is better)
Translates to: HCPFNYRQLCVFKPRILGKTLVS*KNRVWH
Trigger: ATGCCATACCCTATTCTTCAACGAGACCAGTGTTTT...GCCTAATATCCTGGGTTTAAACACACACAGTTGCCTGTAATTAAATGGACAGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR CAA 90 bp TTTGAGATTCTATCCCTCAGAGATTATGCTGAGAACATGAGTTTCCACAAGGCTCTTCCAGGCTGCTACTaGTGTTCTTTGATGAAAACA +
Preference number: 5 (lower is better)
Translates to: FEILSLRDYAENMSFHKALPGCY*CSLMKT
Trigger: TGTTTTCATCAAAGAACACAAGTAGCAGCCTGGAAG...AGCCTTGTGGAAACTCATGTTCTCAGCATAATCTCTGAGGGATAGAATCTCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR CAA 90 bp TTTGAGATTCTATCCCTCAGAGATTATGCTGAGAACATGAGTTTCCACAAGGCTTGCCTTCTTGAGAGATaGCATGAGAGATGTCACTTT +
Preference number: 5 (lower is better)
Translates to: FEILSLRDYAENMSFHKACLLER*HERCHF
Trigger: AAAGTGACATCTCTCATGCAATCTCTCAAGAAGGCA...AGCCTTGTGGAAACTCATGTTCTCAGCATAATCTCTGAGGGATAGAATCTCAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR CAA 90 bp TTTGAGATTCTATCCCTCAGAGATTATGCTGAGAACATGAGTTTCCACAAGGCTACTTCATCAAGAGTTTaGTTGACTTGCTGCTGTAGC +
Preference number: 5 (lower is better)
Translates to: FEILSLRDYAENMSFHKATSSRV*LTCCCS
Trigger: GCTACAGCAGCAAGTCAACAAAACTCTTGATGAAGT...AGCCTTGTGGAAACTCATGTTCTCAGCATAATCTCTGAGGGATAGAATCTCAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR CAA 90 bp TGGACTGGCATAAAGCAGGAATGCATATGGCAATTTCTTTATATCACACCATACGGTCCATCCCAGAGCTaGGTTCATCCAATAAAAGAA +
Preference number: 5 (lower is better)
Translates to: WTGIKQECIWQFLYITPYGPSQS*VHPIKE
Trigger: TTCTTTTATTGGATGAACCAAGCTCTGGGATGGACC...GTATGGTGTGATATAAAGAAATTGCCATATGCATTCCTGCTTTATGCCAGTCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS GCA 90 bp ATATCATCTGACATTTCTGTGGGTCTTAGAAGTAAATCCTTGAAGTaGTTCCAGTTGGACTGGGAAGCAACATTGAGATCTTCTGTTAAG +
Preference number: 5 (lower is better)
Translates to: ISSDISVGLRSKSLK*FQLDWEATLRSSVK
Trigger: CTTAACAGAAGATCTCAATGTTGCTTCCCAGTCCAACTGGAAGCACTTCAAGGATTTACTTCTAAGACCCACAGAAATGTCAGATGATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS GCA 90 bp TTTCAGAATTTCAAGGATTTTATCTCTAGGGACAAAACTCACCTCTaGAGTGACATCGCTATGCAATCCATTTATCACGGAGGAGAAGAA +
Preference number: 5 (lower is better)
Translates to: FQNFKDFISRDKTHL*SDIAMQSIYHGGEE
Trigger: TTCTTCTCCTCCGTGATAAATGGATTGCATAGCGATGTCACTGCAGAGGTGAGTTTTGTCCCTAGAGATAAAATCCTTGAAATTCTGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR CAA 90 bp CACTGTCCATTTAATTACAGGCAACTGTGTGTGTTTAAACCCAGGATATTAGGCGAAGGCTTTCCAATTTaGATATCACATCCTCAGTCT +
Preference number: 5 (lower is better)
Translates to: HCPFNYRQLCVFKPRILGEGFPI*ISHPQS
Trigger: AGACTGAGGATGTGATATCAAAATTGGAAAGCCTTC...GCCTAATATCCTGGGTTTAAACACACACAGTTGCCTGTAATTAAATGGACAGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR CAA 90 bp TTTGAGATTCTATCCCTCAGAGATTATGCTGAGAACATGAGTTTCCACAAGGCTAAACCAAATTGGGATTaGAGATCAGACTGGACTTTC +
Preference number: 5 (lower is better)
Translates to: FEILSLRDYAENMSFHKAKPNWD*RSDWTF
Trigger: GAAAGTCCAGTCTGATCTCAAATCCCAATTTGGTTT...AGCCTTGTGGAAACTCATGTTCTCAGCATAATCTCTGAGGGATAGAATCTCAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR CAA 90 bp TGGACTGGCATAAAGCAGGAATGCATATGGCAATTTCTTTATATCACACCATACGCTTGCAAATTTGGCTaGATGATCAGGAAGATCATC +
Preference number: 5 (lower is better)
Translates to: WTGIKQECIWQFLYITPYACKFG*MIRKII
Trigger: GATGATCTTCCTGATCATCAAGCCAAATTTGCAAGC...GTATGGTGTGATATAAAGAAATTGCCATATGCATTCCTGCTTTATGCCAGTCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR CAA 90 bp TTTGAGATTCTATCCCTCAGAGATTATGCTGAGAACATGAGTTTCCACAAGGCTATTGCCTTCTCTAGATaGGTTTCTGAGATAACCCAA +
Preference number: 5 (lower is better)
Translates to: FEILSLRDYAENMSFHKAIAFSR*VSEITQ
Trigger: TTGGGTTATCTCAGAAACCAATCTAGAGAAGGCAAT...AGCCTTGTGGAAACTCATGTTCTCAGCATAATCTCTGAGGGATAGAATCTCAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR CAA 90 bp CACTGTCCATTTAATTACAGGCAACTGTGTGTGTTTAAACCCAGGATATTAGGCCTTTTAAAAGATCATTaGGATGCTGGGCAAATGCCA +
Preference number: 5 (lower is better)
Translates to: HCPFNYRQLCVFKPRILGLLKDH*DAGQMP
Trigger: TGGCATTTGCCCAGCATCCAAATGATCTTTTAAAAG...GCCTAATATCCTGGGTTTAAACACACACAGTTGCCTGTAATTAAATGGACAGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR CAA 90 bp TTTGAGATTCTATCCCTCAGAGATTATGCTGAGAACATGAGTTTCCACAAGGCTGCTGTATTAGCTTGGTaGAAAAACACACTTAGGAAG +
Preference number: 5 (lower is better)
Translates to: FEILSLRDYAENMSFHKAAVLAW*KNTLRK
Trigger: CTTCCTAAGTGTGTTTTTCAACCAAGCTAATACAGC...AGCCTTGTGGAAACTCATGTTCTCAGCATAATCTCTGAGGGATAGAATCTCAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR CAA 90 bp CACTGTCCATTTAATTACAGGCAACTGTGTGTGTTTAAACCCAGGATATTAGGCTTCAAGCACCCTCATTaGCTCTGTTTCAACATCTAT +
Preference number: 5 (lower is better)
Translates to: HCPFNYRQLCVFKPRILGFKHPH*LCFNIY
Trigger: ATAGATGTTGAAACAGAGCAAATGAGGGTGCTTGAA...GCCTAATATCCTGGGTTTAAACACACACAGTTGCCTGTAATTAAATGGACAGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR CAA 90 bp TGGACTGGCATAAAGCAGGAATGCATATGGCAATTTCTTTATATCACACCATACTTCAGGAGGCTCTTGTaGTTCTCAAGAACTTTGAAC +
Preference number: 5 (lower is better)
Translates to: WTGIKQECIWQFLYITPYFRRLL*FSRTLN
Trigger: GTTCAAAGTTCTTGAGAACAACAAGAGCCTCCTGAA...GTATGGTGTGATATAAAGAAATTGCCATATGCATTCCTGCTTTATGCCAGTCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS CCA 90 bp AGCTGGTGCAGGGAGGTTTCCATGGTGATAAAAGTTTTCTCTACTTaGTCCAGGTTAAGTGATTGTACTGTAGTTAATTCATTACCAAAT +
Preference number: 5 (lower is better)
Translates to: SWCREVSMVIKVFST*SRLSDCTVVNSLPN
Trigger: ATTTGGTAATGAATTAACTACAGTACAATCACTTAACCTGGACCAAGTAGAGAAAACTTTTATCACCATGGAAACCTCCCTGCACCAGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR CAA 90 bp CATAGTCTGTGGGATTCTAAGCGTGTTATAAATGACAAACATCTTCAATTTTGCAGGTGCTTTGTGAAATaGAAGGCCGTGGTTATGGAA +
Preference number: 5 (lower is better)
Translates to: HSLWDSKRVINDKHLQFCRCFVK*KAVVME
Trigger: TTCCATAACCACGGCCTTCAATTTCACAAAGCACCT...GCAAAATTGAAGATGTTTGTCATTTATAACACGCTTAGAATCCCACAGACTATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR CAA 90 bp TGGACTGGCATAAAGCAGGAATGCATATGGCAATTTCTTTATATCACACCATACTTCATCAATGGGTTTTaGTTCATCCAGGTAAGGAAC +
Preference number: 5 (lower is better)
Translates to: WTGIKQECIWQFLYITPYFINGF*FIQVRN
Trigger: GTTCCTTACCTGGATGAACAAAAACCCATTGATGAA...GTATGGTGTGATATAAAGAAATTGCCATATGCATTCCTGCTTTATGCCAGTCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR CAA 90 bp TTTGAGATTCTATCCCTCAGAGATTATGCTGAGAACATGAGTTTCCACAAGGCTCTTCCCTGGAAAAGTTaGGATATCTTCAGAAATGTT +
Preference number: 5 (lower is better)
Translates to: FEILSLRDYAENMSFHKALPWKS*DIFRNV
Trigger: AACATTTCTGAAGATATCCAAACTTTTCCAGGGAAG...AGCCTTGTGGAAACTCATGTTCTCAGCATAATCTCTGAGGGATAGAATCTCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR CAA 90 bp TGGACTGGCATAAAGCAGGAATGCATATGGCAATTTCTTTATATCACACCATACTGTCTCAAGGAACTGTaGAATATAATACTGGCCAAG +
Preference number: 5 (lower is better)
Translates to: WTGIKQECIWQFLYITPYCLKEL*NIILAK
Trigger: CTTGGCCAGTATTATATTCAACAGTTCCTTGAGACA...GTATGGTGTGATATAAAGAAATTGCCATATGCATTCCTGCTTTATGCCAGTCCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR CAA 90 bp TTTGAGATTCTATCCCTCAGAGATTATGCTGAGAACATGAGTTTCCACAAGGCTTCTCTCAATCATGTCTaGAAGTGGGACAAAAATGTA +
Preference number: 5 (lower is better)
Translates to: FEILSLRDYAENMSFHKASLNHV*KWDKNV
Trigger: TACATTTTTGTCCCACTTCAAGACATGATTGAGAGA...AGCCTTGTGGAAACTCATGTTCTCAGCATAATCTCTGAGGGATAGAATCTCAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR CAA 90 bp TTTGAGATTCTATCCCTCAGAGATTATGCTGAGAACATGAGTTTCCACAAGGCTTTGGTTTTGATGTGTTaGTCTTCACATCTTCAGCAT +
Preference number: 5 (lower is better)
Translates to: FEILSLRDYAENMSFHKALVLMC*SSHLQH
Trigger: ATGCTGAAGATGTGAAGACAAACACATCAAAACCAA...AGCCTTGTGGAAACTCATGTTCTCAGCATAATCTCTGAGGGATAGAATCTCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS TCA 90 bp AAAATGATGATCCATGGAACTCTCAAAGCTGATGTTTCTACAACTTaGGCCAGTATTACAAAGAAGTCCTTGAACAAAAGGAAGAACACC +
Preference number: 5 (lower is better)
Translates to: KMMIHGTLKADVSTT*ASITKKSLNKRKNT
Trigger: GGTGTTCTTCCTTTTGTTCAAGGACTTCTTTGTAATACTGGCTCAAGTTGTAGAAACATCAGCTTTGAGAGTTCCATGGATCATCATTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000042740.13
ENSMUST00000151522.2
CDS-3UTR CAA 90 bp CATAGTCTGTGGGATTCTAAGCGTGTTATAAATGACAAACATCTTCAATTTTGCGATTTGCAAAGCACCTaGCTTTATGGTACTAGTAGG +
Preference number: 5 (lower is better)
Translates to: HSLWDSKRVINDKHLQFCDLQST*LYGTSR
Trigger: CCTACTAGTACCATAAAGCAAGGTGCTTTGCAAATC...GCAAAATTGAAGATGTTTGTCATTTATAACACGCTTAGAATCCCACAGACTATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR CAA 90 bp CATAGTCTGTGGGATTCTAAGCGTGTTATAAATGACAAACATCTTCAATTTTGCAACAGACCTGAGATTTaGGTTGAATTTGGAGAGGTC +
Preference number: 5 (lower is better)
Translates to: HSLWDSKRVINDKHLQFCNRPEI*VEFGEV
Trigger: GACCTCTCCAAATTCAACCAAAATCTCAGGTCTGTT...GCAAAATTGAAGATGTTTGTCATTTATAACACGCTTAGAATCCCACAGACTATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR CAA 90 bp TGGACTGGCATAAAGCAGGAATGCATATGGCAATTTCTTTATATCACACCATACTCTGTGACTGTGAAATaGCTAAGAAATGTCATAGCA +
Preference number: 5 (lower is better)
Translates to: WTGIKQECIWQFLYITPYSVTVK*LRNVIA
Trigger: TGCTATGACATTTCTTAGCAATTTCACAGTCACAGA...GTATGGTGTGATATAAAGAAATTGCCATATGCATTCCTGCTTTATGCCAGTCCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR CAA 90 bp CATAGTCTGTGGGATTCTAAGCGTGTTATAAATGACAAACATCTTCAATTTTGCATGAACATGTTAGAATaGCTGAGGAAAGACTCCTGG +
Preference number: 5 (lower is better)
Translates to: HSLWDSKRVINDKHLQFCMNMLE*LRKDSW
Trigger: CCAGGAGTCTTTCCTCAGCAATTCTAACATGTTCAT...GCAAAATTGAAGATGTTTGTCATTTATAACACGCTTAGAATCCCACAGACTATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR CAA 90 bp CATAGTCTGTGGGATTCTAAGCGTGTTATAAATGACAAACATCTTCAATTTTGCAAGGCCACTTATATGTaGCAGTCTTTTAGCTCCAGT +
Preference number: 5 (lower is better)
Translates to: HSLWDSKRVINDKHLQFCKATYM*QSFSSS
Trigger: ACTGGAGCTAAAAGACTGCAACATATAAGTGGCCTT...GCAAAATTGAAGATGTTTGTCATTTATAACACGCTTAGAATCCCACAGACTATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR CAA 90 bp CATAGTCTGTGGGATTCTAAGCGTGTTATAAATGACAAACATCTTCAATTTTGCAGATTTTGGTTGAATTaGGAGAGGTCCTCAGAACTA +
Preference number: 5 (lower is better)
Translates to: HSLWDSKRVINDKHLQFCRFWLN*ERSSEL
Trigger: TAGTTCTGAGGACCTCTCCAAATTCAACCAAAATCT...GCAAAATTGAAGATGTTTGTCATTTATAACACGCTTAGAATCCCACAGACTATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS-3UTR CAA 90 bp CATAGTCTGTGGGATTCTAAGCGTGTTATAAATGACAAACATCTTCAATTTTGCCCAAAGTCCTTGGTTTaGATGTGTTTGTCTTCACAT +
Preference number: 5 (lower is better)
Translates to: HSLWDSKRVINDKHLQFCPKSLV*MCLSSH
Trigger: ATGTGAAGACAAACACATCAAAACCAAGGACTTTGG...GCAAAATTGAAGATGTTTGTCATTTATAACACGCTTAGAATCCCACAGACTATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS TCA 90 bp AGTAATGCTCAATATTCAGGAGGCTCTTGTTGTTCTCAAGAACTTTaGACAAATCAGCTAAACACTCCCAACTCTTTTGTACATGATATT +
Preference number: 5 (lower is better)
Translates to: SNAQYSGGSCCSQEL*TNQLNTPNSFVHDI
Trigger: AATATCATGTACAAAAGAGTTGGGAGTGTTTAGCTGATTTGTTCAAAGTTCTTGAGAACAACAAGAGCCTCCTGAATATTGAGCATTACT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS GCA 72 bp CTGCTCCCTAAGGGCTGCCAGACTGTGACTGGCACCTaGAAGCAGGCTCTGCAGCAGACTACCCTGCTGCCA +
Preference number: 6 (lower is better)
Translates to: LLPKGCQTVTGT*KQALQQTTLLP
Trigger: TGGCAGCAGGGTAGTCTGCTGCAGAGCCTGCTTGCAGGTGCCAGTCACAGTCTGGCAGCCCTTAGGGAGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS GCA 72 bp TGGCCAGCCGAGTACACAGAGCCTCGCACTCTTCCATaGTGTGAGAGGTTAGCACTGCGGCACAGCCATCCC +
Preference number: 6 (lower is better)
Translates to: WPAEYTEPRTLP*CERLALRHSHP
Trigger: GGGATGGCTGTGCCGCAGTGCTAACCTCTCACAGCATGGAAGAGTGCGAGGCTCTGTGTACTCGGCTGGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS CCA 72 bp CCAGCACACCCAGCCAAATGTCATGCCCCCTGGCTCTaGAGCGCGGTACATGTTACCCCACTGGATCCCTTC +
Preference number: 6 (lower is better)
Translates to: PAHPAKCHAPWL*SAVHVTPLDPF
Trigger: GAAGGGATCCAGTGGGGTAACATGTACCGCGCTCCAGAGCCAGGGGGCATGACATTTGGCTGGGTGTGCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS CCA 72 bp TTCCTCAGGAGTGCCACTGCTTGTCCCAGAAGTAGCTaGCAGCCACCTATCGGCTCAGGCAGGGCCCCTTCT +
Preference number: 6 (lower is better)
Translates to: FLRSATACPRSS*QPPIGSGRAPS
Trigger: AGAAGGGGCCCTGCCTGAGCCGATAGGTGGCTGCCAGCTACTTCTGGGACAAGCAGTGGCACTCCTGAGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS TCA 72 bp CTCTGGGGACATCCGCTGCCAAGCTGTCATTCAAGATaGGCAGGGCAGTGTGCAGGGCTTCCACCACCTTCC +
Preference number: 6 (lower is better)
Translates to: LWGHPLPSCHSR*AGQCAGLPPPS
Trigger: GGAAGGTGGTGGAAGCCCTGCACACTGCCCTGCTCATCTTGAATGACAGCTTGGCAGCGGATGTCCCCAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS TCA 72 bp AGGTCTCCTTCAGGTCTGCAGGAGGAGCATAGCATCTaGGCCTCCCCTGCTGGAGAACAGCCACGTGGTCAC +
Preference number: 6 (lower is better)
Translates to: RSPSGLQEEHSI*ASPAGEQPRGH
Trigger: GTGACCACGTGGCTGTTCTCCAGCAGGGGAGGCTCAGATGCTATGCTCCTCCTGCAGACCTGAAGGAGACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS GCA 72 bp GCTGCCAAGCTGTCATTCAAGATGAGCAGGGCAGTGTaGAGGGCTTCCACCACCTTCCACGACTCGCTCTGC +
Preference number: 6 (lower is better)
Translates to: AAKLSFKMSRAV*RASTTFHDSLC
Trigger: GCAGAGCGAGTCGTGGAAGGTGGTGGAAGCCCTGCACACTGCCCTGCTCATCTTGAATGACAGCTTGGCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS GCA 72 bp GCACCTGCAAGCAGGCTCTGCAGCAGACTACCCTGCTaGCACTGGTCAAACACCTGTCCGTATAGCTTCAGC +
Preference number: 6 (lower is better)
Translates to: APASRLCSRLPC*HWSNTCPYSFS
Trigger: GCTGAAGCTATACGGACAGGTGTTTGACCAGTGGCAGCAGGGTAGTCTGCTGCAGAGCCTGCTTGCAGGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS GCA 72 bp CTGGCACCTGCAAGCAGGCTCTGCAGCAGACTACCCTaGTGCCACTGGTCAAACACCTGTCCGTATAGCTTC +
Preference number: 6 (lower is better)
Translates to: LAPASRLCSRLP*CHWSNTCPYSF
Trigger: GAAGCTATACGGACAGGTGTTTGACCAGTGGCAGCAGGGTAGTCTGCTGCAGAGCCTGCTTGCAGGTGCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS GCA 72 bp CGACTCGCTCTGCTGTTTAAACTGCTCCCTAAGGGCTaGCAGACTGTGACTGGCACCTGCAAGCAGGCTCTG +
Preference number: 6 (lower is better)
Translates to: RLALLFKLLPKG*QTVTGTCKQAL
Trigger: CAGAGCCTGCTTGCAGGTGCCAGTCACAGTCTGGCAGCCCTTAGGGAGCAGTTTAAACAGCAGAGCGAGTCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS GCA 72 bp GTGTGCAGGGCTTCCACCACCTTCCACGACTCGCTCTaGTGTTTAAACTGCTCCCTAAGGGCTGCCAGACTG +
Preference number: 6 (lower is better)
Translates to: VCRASTTFHDSL*CLNCSLRAARL
Trigger: CAGTCTGGCAGCCCTTAGGGAGCAGTTTAAACAGCAGAGCGAGTCGTGGAAGGTGGTGGAAGCCCTGCACAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS GCA 72 bp CCCAGAGACTGCGACGGGAACAAGGGTCCACCCCACTaGTTGGCTCATCCAGAACCACTGTCTTTGACATGC +
Preference number: 6 (lower is better)
Translates to: PRDCDGNKGPPH*LAHPEPLSLTC
Trigger: GCATGTCAAAGACAGTGGTTCTGGATGAGCCAAGCAGTGGGGTGGACCCTTGTTCCCGTCGCAGTCTCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS GCA 72 bp CAGGGTGAGTCCTTGACCATAGGTCTCCTTCAGGTCTaGAGGAGGAGCATAGCATCTGAGCCTCCCCTGCTG +
Preference number: 6 (lower is better)
Translates to: QGESLTIGLLQV*RRSIASEPPLL
Trigger: CAGCAGGGGAGGCTCAGATGCTATGCTCCTCCTGCAGACCTGAAGGAGACCTATGGTCAAGGACTCACCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS GCA 72 bp CAGAGCCTGGCAGAGCCCCTTGAAGCAGGTTCTGTCTaGATCCTTGGGGATGGTATAGGTCAGCTCACCTCC +
Preference number: 6 (lower is better)
Translates to: QSLAEPLEAGSV*ILGDGIGQLTS
Trigger: GGAGGTGAGCTGACCTATACCATCCCCAAGGATGCAGACAGAACCTGCTTCAAGGGGCTCTGCCAGGCTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS CAA 90 bp TGTGTCCCAGGCAGTTGGTCAGAGAGGGAGCACCAGCGCTTTTATTaGGACACTTCAGGCAGCCACATGAGTCCTGGGATTCTGGGCCAG +
Preference number: 6 (lower is better)
Translates to: CVPGSWSEREHQRFY*DTSGSHMSPGILGQ
Trigger: CTGGCCCAGAATCCCAGGACTCATGTGGCTGCCTGAAGTGTCCAAATAAAAGCGCTGGTGCTCCCTCTCTGACCAACTGCCTGGGACACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS TCA 72 bp TGTCCACTGAGTGTTGTTCAGGGGCAGCCCTTCCCTTaGGAAGCCTGCTTTGCCGAGACCAATCAGGACAGC +
Preference number: 6 (lower is better)
Translates to: CPLSVVQGQPFP*EACFAETNQDS
Trigger: GCTGTCCTGATTGGTCTCGGCAAAGCAGGCTTCTCAAGGGAAGGGCTGCCCCTGAACAACACTCAGTGGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS GCA 72 bp TGTGCTGCTGAACCACTCCCACCAAGGGCTGGCACGTaGAGCGATGGCTGGAAGCATTGTCCAAGATGCTTT +
Preference number: 6 (lower is better)
Translates to: CAAEPLPPRAGT*SDGWKHCPRCF
Trigger: AAAGCATCTTGGACAATGCTTCCAGCCATCGCTGCACGTGCCAGCCCTTGGTGGGAGTGGTTCAGCAGCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS GCA 72 bp TGTTCACGCACAGTGAGGTTGTCCAGGAGAACATCCTaGTGTGGACACACCCCCAGCTCCTCTCTGACCTTG +
Preference number: 6 (lower is better)
Translates to: CSRTVRLSRRTS*CGHTPSSSLTL
Trigger: CAAGGTCAGAGAGGAGCTGGGGGTGTGTCCACAGCAGGATGTTCTCCTGGACAACCTCACTGTGCGTGAACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS GCA 72 bp GCGGCACAGCCATCCCGAACCTCTTGTGTTATTGTTTaGCAGAGGTACCGCTTAGAGCAGGGGTCCATCCCA +
Preference number: 6 (lower is better)
Translates to: AAQPSRTSCVIV*QRYRLEQGSIP
Trigger: TGGGATGGACCCCTGCTCTAAGCGGTACCTCTGGCAAACAATAACACAAGAGGTTCGGGATGGCTGTGCCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS CAA 72 bp GTGTCCACTGAGTGTTGTTCAGGGGCAGCCCTTCCCTaGAGAAGCCTGCTTTGCCGAGACCAATCAGGACAG +
Preference number: 6 (lower is better)
Translates to: VSTECCSGAALP*RSLLCRDQSGQ
Trigger: CTGTCCTGATTGGTCTCGGCAAAGCAGGCTTCTCAAGGGAAGGGCTGCCCCTGAACAACACTCAGTGGACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS CAA 72 bp GATAGAGGGTTGCTTGCTGAGCGTCAGGGTGAGTCCTaGACCATAGGTCTCCTTCAGGTCTGCAGGAGGAGC +
Preference number: 6 (lower is better)
Translates to: DRGLLAERQGES*TIGLLQVCRRS
Trigger: GCTCCTCCTGCAGACCTGAAGGAGACCTATGGTCAAGGACTCACCCTGACGCTCAGCAAGCAACCCTCTATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS CAA 72 bp TGCGGCACAGCCATCCCGAACCTCTTGTGTTATTGTTaGCCAGAGGTACCGCTTAGAGCAGGGGTCCATCCC +
Preference number: 6 (lower is better)
Translates to: CGTAIPNLLCYC*PEVPLRAGVHP
Trigger: GGGATGGACCCCTGCTCTAAGCGGTACCTCTGGCAAACAATAACACAAGAGGTTCGGGATGGCTGTGCCGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS TCA 72 bp TGCTGTTTAAACTGCTCCCTAAGGGCTGCCAGACTGTaGCTGGCACCTGCAAGCAGGCTCTGCAGCAGACTA +
Preference number: 6 (lower is better)
Translates to: CCLNCSLRAARL*LAPASRLCSRL
Trigger: TAGTCTGCTGCAGAGCCTGCTTGCAGGTGCCAGTCACAGTCTGGCAGCCCTTAGGGAGCAGTTTAAACAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS TCA 72 bp CCAGCAAGTACTCTTCCACATCATAGCCCGAGAGGTTaGGCAGTGTGTGTCCCAGGCAGTTGGTCAGAGAGG +
Preference number: 6 (lower is better)
Translates to: PASTLPHHSPRG*AVCVPGSWSER
Trigger: CCTCTCTGACCAACTGCCTGGGACACACACTGCTCAACCTCTCGGGCTATGATGTGGAAGAGTACTTGCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS GCA 72 bp AGAACTCAGCCAGGGAGAGGACTGGATGCCGGAGTCTaGAAATCCAGTTCTTCCAGAGCAGGGCTTGGAACT +
Preference number: 6 (lower is better)
Translates to: RTQPGRGLDAGV*KSSSSRAGLGT
Trigger: AGTTCCAAGCCCTGCTCTGGAAGAACTGGATTTGCAGACTCCGGCATCCAGTCCTCTCCCTGGCTGAGTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS GCA 72 bp CTGACCACTTGGGATGACAGTCTGCCCGGTAGCCCTTaGTCTCGGCTTCATCCTCAGAAGTGTTGGACAAGA +
Preference number: 6 (lower is better)
Translates to: LTTWDDSLPGSP*SRLHPQKCWTR
Trigger: TCTTGTCCAACACTTCTGAGGATGAAGCCGAGAGCAAGGGCTACCGGGCAGACTGTCATCCCAAGTGGTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS GCA 72 bp TGTTCAGGGGCAGCCCTTCCCTTGAGAAGCCTGCTTTaGCGAGACCAATCAGGACAGCCTTTGCAAGCTGAT +
Preference number: 6 (lower is better)
Translates to: CSGAALPLRSLL*RDQSGQPLQAD
Trigger: ATCAGCTTGCAAAGGCTGTCCTGATTGGTCTCGGCAAAGCAGGCTTCTCAAGGGAAGGGCTGCCCCTGAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS GCA 72 bp GGCGTCCTGCTGTGGACAGTAGCCAATCAGAATGCCTaGTTTGCCAGCAGAAGCCAGATCCACCATATCTCC +
Preference number: 6 (lower is better)
Translates to: GVLLWTVANQNA*FASRSQIHHIS
Trigger: GGAGATATGGTGGATCTGGCTTCTGCTGGCAAAGCAGGCATTCTGATTGGCTACTGTCCACAGCAGGACGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS CCA 72 bp GAGAATCCCAGGACAATGCAGAGGGCAACACCACACTaGCGGATGCTCTCCAGGATCCTGTCTTCATTCAGC +
Preference number: 6 (lower is better)
Translates to: ENPRTMQRATPH*RMLSRILSSFS
Trigger: GCTGAATGAAGACAGGATCCTGGAGAGCATCCGCCAGTGTGGTGTTGCCCTCTGCATTGTCCTGGGATTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS CAA 72 bp GAGGCAAAGAGCATTAGGTGTTCACGCACAGTGAGGTaGTCCAGGAGAACATCCTGCTGTGGACACACCCCC +
Preference number: 6 (lower is better)
Translates to: EAKSIRCSRTVR*SRRTSCCGHTP
Trigger: GGGGGTGTGTCCACAGCAGGATGTTCTCCTGGACAACCTCACTGTGCGTGAACACCTAATGCTCTTTGCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS TCA 72 bp CATATGCTAGAGTTCCCAGTGGGGAGGGCAGCCTCCTaGGACAAATGTCCATTCAGGCAAAGGGCAGAAGCA +
Preference number: 6 (lower is better)
Translates to: HMLEFPVGRAAS*DKCPFRQRAEA
Trigger: TGCTTCTGCCCTTTGCCTGAATGGACATTTGTCTCAGGAGGCTGCCCTCCCCACTGGGAACTCTAGCATATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS GCA 72 bp CACATGAGACTCAAGGTGCAAGCGTCGCACCAGGTCTaGAGCAACCTCTGGGATGTACTGCTTTGGAATTCC +
Preference number: 6 (lower is better)
Translates to: HMRLKVQASHQV*SNLWDVLLWNS
Trigger: GGAATTCCAAAGCAGTACATCCCAGAGGTTGCTGCAGACCTGGTGCGACGCTTGCACCTTGAGTCTCATGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS CCA 72 bp CGCTTGGGGGTGGCAGGTGAAGAAGATCCAGTAGACTaGTCACCATGTGAAAGAAGGATGAAGGCATGTGCC +
Preference number: 6 (lower is better)
Translates to: RLGVAGEEDPVD*SPCERRMKACA
Trigger: GGCACATGCCTTCATCCTTCTTTCACATGGTGACCAGTCTACTGGATCTTCTTCACCTGCCACCCCCAAGCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS CCA 72 bp AGAGTGGCCATGTTCTCCAGGAACCAGGACAGGAAGTaGATGGTTGGATGCAGTCCCATCATCCGCATGTAC +
Preference number: 6 (lower is better)
Translates to: RVAMFSRNQDRK*MVGCSPIIRMY
Trigger: GTACATGCGGATGATGGGACTGCATCCAACCATCCACTTCCTGTCCTGGTTCCTGGAGAACATGGCCACTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS CCA 72 bp GCCACGTGGTCACTGAGCATCTCAGCTTCATCCAGGTaGTGGGTTGTGAAGATAATTGTGCGACCTTCTCGG +
Preference number: 6 (lower is better)
Translates to: ATWSLSISASSR*WVVKIIVRPSR
Trigger: CCGAGAAGGTCGCACAATTATCTTCACAACCCACCACCTGGATGAAGCTGAGATGCTCAGTGACCACGTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS CCA 72 bp AAGGTGCAAGCGTCGCACCAGGTCTGCAGCAACCTCTaGGATGTACTGCTTTGGAATTCCACGGAGTCTACA +
Preference number: 6 (lower is better)
Translates to: KVQASHQVCSNL*DVLLWNSTEST
Trigger: TGTAGACTCCGTGGAATTCCAAAGCAGTACATCCCAGAGGTTGCTGCAGACCTGGTGCGACGCTTGCACCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS CAA 72 bp AAAAGGAAGAACACCCCGGCTGGGCAGATCCCGGGCTaGCAAGTAACAATTCTCTCTGTGTCTGGGAGGTTC +
Preference number: 6 (lower is better)
Translates to: KRKNTPAGQIPG*QVTILSVSGRF
Trigger: GAACCTCCCAGACACAGAGAGAATTGTTACTTGCAAGCCCGGGATCTGCCCAGCCGGGGTGTTCTTCCTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000042740.13
ENSMUST00000151522.2
CDS CAA 72 bp GGCAGTTGGTCAGAGAGGGAGCACCAGCGCTTTTATTaGGACACTTCAGGCAGCCACATGAGTCCTGGGATT +
Preference number: 6 (lower is better)
Translates to: GSWSEREHQRFY*DTSGSHMSPGI
Trigger: AATCCCAGGACTCATGTGGCTGCCTGAAGTGTCCAAATAAAAGCGCTGGTGCTCCCTCTCTGACCAACTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS TCA 72 bp CCAACTGACTGCATGGATGATGTAGTTCTTGACTGCTaGCCACTTGGGATGACAGTCTGCCCGGTAGCCCTT +
Preference number: 6 (lower is better)
Translates to: PTDCMDDVVLDC*PLGMTVCPVAL
Trigger: AAGGGCTACCGGGCAGACTGTCATCCCAAGTGGTCAGCAGTCAAGAACTACATCATCCATGCAGTCAGTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS TCA 72 bp GAACATCCTGCTGTGGACACACCCCCAGCTCCTCTCTaGCCTTGGACAAATCTGTCTGCAGATTCTTGCCAT +
Preference number: 6 (lower is better)
Translates to: EHPAVDTPPAPL*PWTNLSADSCH
Trigger: ATGGCAAGAATCTGCAGACAGATTTGTCCAAGGTCAGAGAGGAGCTGGGGGTGTGTCCACAGCAGGATGTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS GCA 72 bp AGAGCTGGCCATGGGGACAGGTCTGACAGGGCATGCTaGAACTTGCTTAGATGCTGGAATATCTGTGGAAAC +
Preference number: 6 (lower is better)
Translates to: RAGHGDRSDRAC*NLLRCWNICGN
Trigger: GTTTCCACAGATATTCCAGCATCTAAGCAAGTTGCAGCATGCCCTGTCAGACCTGTCCCCATGGCCAGCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS GCA 72 bp TTCAGAGCTGGCCATGGGGACAGGTCTGACAGGGCATaGTGCAACTTGCTTAGATGCTGGAATATCTGTGGA +
Preference number: 6 (lower is better)
Translates to: FRAGHGDRSDRA*CNLLRCWNICG
Trigger: TCCACAGATATTCCAGCATCTAAGCAAGTTGCAGCATGCCCTGTCAGACCTGTCCCCATGGCCAGCTCTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS GCA 72 bp AAGCATCAGCACAGACAGGGTCTTGATCTCGGAACTTaGGCAGAAGCACATGAGTTAGGTCTGGGCCATGGT +
Preference number: 6 (lower is better)
Translates to: KHQHRQGLDLGT*AEAHELGLGHG
Trigger: ACCATGGCCCAGACCTAACTCATGTGCTTCTGCGCAAGTTCCGAGATCAAGACCCTGTCTGTGCTGATGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS GCA 72 bp CAATCGATGCTGATAAGATGGAGAATCCCAGGACAATaGAGAGGGCAACACCACACTGGCGGATGCTCTCCA +
Preference number: 6 (lower is better)
Translates to: QSMLIRWRIPGQ*RGQHHTGGCSP
Trigger: TGGAGAGCATCCGCCAGTGTGGTGTTGCCCTCTGCATTGTCCTGGGATTCTCCATCTTATCAGCATCGATTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS GCA 72 bp CCTGCTGTGGACAGTAGCCAATCAGAATGCCTGCTTTaGCAGCAGAAGCCAGATCCACCATATCTCCTTGAG +
Preference number: 6 (lower is better)
Translates to: PAVDSSQSECLL*QQKPDPPYLLE
Trigger: CTCAAGGAGATATGGTGGATCTGGCTTCTGCTGGCAAAGCAGGCATTCTGATTGGCTACTGTCCACAGCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS CCA 72 bp GTGGAGATGGTCACGTTCAGAACATGTCTAGAAACCTaGGGGATGGTCTGGTGCAGGGGTAGCCAATCCAAA +
Preference number: 6 (lower is better)
Translates to: VEMVTFRTCLET*GMVWCRGSQSK
Trigger: TTTGGATTGGCTACCCCTGCACCAGACCATCCCCCAGGTTTCTAGACATGTTCTGAACGTGACCATCTCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS CAA 72 bp GGCCATGGGGACAGGTCTGACAGGGCATGCTGCAACTaGCTTAGATGCTGGAATATCTGTGGAAACAGATGG +
Preference number: 6 (lower is better)
Translates to: GHGDRSDRACCN*LRCWNICGNRW
Trigger: CCATCTGTTTCCACAGATATTCCAGCATCTAAGCAAGTTGCAGCATGCCCTGTCAGACCTGTCCCCATGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS CAA 72 bp CCACTGCATACTTTTCACCTATGCACTGTGAGTCGCTaGGGGGTGGCAGGTGAAGAAGATCCAGTAGACTGG +
Preference number: 6 (lower is better)
Translates to: PLHTFHLCTVSR*GVAGEEDPVDW
Trigger: CCAGTCTACTGGATCTTCTTCACCTGCCACCCCCAAGCGACTCACAGTGCATAGGTGAAAAGTATGCAGTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS CAA 90 bp CTCTGGGATGTACTGCTTTGGAATTCCACGGAGTCTACAGTAGTATaGAAGATGTTCCCAGCCAGTCAGAAGCTCATCCAGGGCGTCCTG +
Preference number: 6 (lower is better)
Translates to: LWDVLLWNSTESTVV*KMFPASQKLIQGVL
Trigger: CAGGACGCCCTGGATGAGCTTCTGACTGGCTGGGAACATCTTCAATACTACTGTAGACTCCGTGGAATTCCAAAGCAGTACATCCCAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS TCA 72 bp CGATATTCTTCAGGGACAGGTGGTAAATGGTCTCATTaGCAACAGCGCTGTGCTGCTGCAGAAACCTCAGGG +
Preference number: 6 (lower is better)
Translates to: RYSSGTGGKWSH*QQRCAAAETSG
Trigger: CCCTGAGGTTTCTGCAGCAGCACAGCGCTGTTGTCAATGAGACCATTTACCACCTGTCCCTGAAGAATATCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS TCA 72 bp GCTTTCACAGCCACCAGGAGAGAAACTATTCTCAGGTaGGGTATCAGCTCTTGGAAGCTGGAAGACCCGAGA +
Preference number: 6 (lower is better)
Translates to: AFTATRRETILR*GISSWKLEDPR
Trigger: TCTCGGGTCTTCCAGCTTCCAAGAGCTGATACCTCACCTGAGAATAGTTTCTCTCCTGGTGGCTGTGAAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS TCA 72 bp CACCCCACTGCTTGGCTCATCCAGAACCACTGTCTTTaGCATGCCCATGAAAGCAATGCCAATGGAGAGCTT +
Preference number: 6 (lower is better)
Translates to: HPTAWLIQNHCL*HAHESNANGEL
Trigger: AAGCTCTCCATTGGCATTGCTTTCATGGGCATGTCAAAGACAGTGGTTCTGGATGAGCCAAGCAGTGGGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS TCA 72 bp GCACATGAGTTAGGTCTGGGCCATGGTTCCCACTGCTaGAGAAGTAAGTTTCTGCAGTCTCGTAATGGCCAG +
Preference number: 6 (lower is better)
Translates to: AHELGLGHGSHC*RSKFLQSRNGQ
Trigger: CTGGCCATTACGAGACTGCAGAAACTTACTTCTTCAGCAGTGGGAACCATGGCCCAGACCTAACTCATGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS GCA 72 bp TCAAACCCGCCTGGAGAAAGTGTGTCACAGCACCCATaGTATCTTCCAAGTGAGCACTGGACATGTACAGTC +
Preference number: 6 (lower is better)
Translates to: SNPPGESVSQHP*YLPSEHWTCTV
Trigger: GACTGTACATGTCCAGTGCTCACTTGGAAGATAGCATGGGTGCTGTGACACACTTTCTCCAGGCGGGTTTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS GCA 72 bp TTCAGAACATGTCTAGAAACCTGGGGGATGGTCTGGTaGAGGGGTAGCCAATCCAAATCTCCCAGAGATGCT +
Preference number: 6 (lower is better)
Translates to: FRTCLETWGMVW*RGSQSKSPRDA
Trigger: AGCATCTCTGGGAGATTTGGATTGGCTACCCCTGCACCAGACCATCCCCCAGGTTTCTAGACATGTTCTGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS GCA 72 bp GGACTGCGCGTGCTTCAAGATGAGATTCATGAGATCTaGTATTTGAAGGTTGGTGCCGCTGAAACTGGGAGG +
Preference number: 6 (lower is better)
Translates to: GLRVLQDEIHEI*YLKVGAAETGR
Trigger: CCTCCCAGTTTCAGCGGCACCAACCTTCAAATAGCAGATCTCATGAATCTCATCTTGAAGCACGCGCAGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS GCA 72 bp ACCAAAGTGACTCCTTGCAAAGCAGCTAAGATAAGGTaGCTCATCGCACCTTGCTTGCAACTCAGCGCAGCA +
Preference number: 6 (lower is better)
Translates to: TKVTPCKAAKIR*LIAPCLQLSAA
Trigger: TGCTGCGCTGAGTTGCAAGCAAGGTGCGATGAGGCACCTTATCTTAGCTGCTTTGCAAGGAGTCACTTTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS GCA 72 bp ACTGGCCAAGAAACTATTCTGCTGCATGAGTTCATGTaGCTTGGTCTCCAGGGTGTCAACAGTCTCCACTGC +
Preference number: 6 (lower is better)
Translates to: TGQETILLHEFM*LGLQGVNSLHC
Trigger: GCAGTGGAGACTGTTGACACCCTGGAGACCAAGGCACATGAACTCATGCAGCAGAATAGTTTCTTGGCCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS GCA 72 bp CCTGGGTTACCTCCTTCCATTTCTCCTGGGCCATTTTaGTGTGAGAGCCCTTTGTTGCCAAAGTCCTCATTG +
Preference number: 6 (lower is better)
Translates to: PGLPPSISPGPF*CESPLLPKSSL
Trigger: CAATGAGGACTTTGGCAACAAAGGGCTCTCACAGCAAAATGGCCCAGGAGAAATGGAAGGAGGTAACCCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS GCA 72 bp CCACAAAGAGCACAGGCAGTAACAAATCTGAGGTGGTaGTTTTCCAGGCTCGAAGTGTATGCAGTAGCCGCT +
Preference number: 6 (lower is better)
Translates to: PQRAQAVTNLRW*FSRLEVYAVAA
Trigger: AGCGGCTACTGCATACACTTCGAGCCTGGAAAAGCACCACCTCAGATTTGTTACTGCCTGTGCTCTTTGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS CCA 72 bp ACGTTCAGAACATGTCTAGAAACCTGGGGGATGGTCTaGTGCAGGGGTAGCCAATCCAAATCTCCCAGAGAT +
Preference number: 6 (lower is better)
Translates to: TFRTCLETWGMV*CRGSQSKSPRD
Trigger: ATCTCTGGGAGATTTGGATTGGCTACCCCTGCACCAGACCATCCCCCAGGTTTCTAGACATGTTCTGAACGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS CCA 72 bp GTTCCTGGACAGCCACCTTGTGATCTTCATACTCCTTaGTCACAGATATCAGAGCCACTCCTGGGTTACCTC +
Preference number: 6 (lower is better)
Translates to: VPGQPPCDLHTP*SQISEPLLGYL
Trigger: GAGGTAACCCAGGAGTGGCTCTGATATCTGTGACCAAGGAGTATGAAGATCACAAGGTGGCTGTCCAGGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS CCA 72 bp AGGCCACAAAGAGCACAGGCAGTAACAAATCTGAGGTaGTGCTTTTCCAGGCTCGAAGTGTATGCAGTAGCC +
Preference number: 6 (lower is better)
Translates to: RPQRAQAVTNLR*CFSRLEVYAVA
Trigger: GGCTACTGCATACACTTCGAGCCTGGAAAAGCACCACCTCAGATTTGTTACTGCCTGTGCTCTTTGTGGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS CCA 72 bp GCCGCCAAGTTCTCCCGAAATGTGAAAGCTGTTAACTaGAAGGCTCCTATAACAGCGACACACAGGCAGACA +
Preference number: 6 (lower is better)
Translates to: AAKFSRNVKAVN*KAPITATHRQT
Trigger: TGTCTGCCTGTGTGTCGCTGTTATAGGAGCCTTCCAGTTAACAGCTTTCACATTTCGGGAGAACTTGGCGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS CCA 72 bp TCCTTAGCAGGCTTAACTATGTCCTGCAGGACAGAGTaGTCCCTTGGCCATCTCAGAAGGTCTCCATGTAAC +
Preference number: 6 (lower is better)
Translates to: SLAGLTMSCRTE*SLGHLRRSPCN
Trigger: GTTACATGGAGACCTTCTGAGATGGCCAAGGGACCACTCTGTCCTGCAGGACATAGTTAAGCCTGCTAAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS CAA 90 bp AGGAGAACATCCTGCTGTGGACACACCCCCAGCTCCTCTCTGACCTaGGACAAATCTGTCTGCAGATTCTTGCCATTTATGGTGATGGTT +
Preference number: 6 (lower is better)
Translates to: RRTSCCGHTPSSSLT*DKSVCRFLPFMVMV
Trigger: AACCATCACCATAAATGGCAAGAATCTGCAGACAGATTTGTCCAAGGTCAGAGAGGAGCTGGGGGTGTGTCCACAGCAGGATGTTCTCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS TCA 72 bp AAGCTGGAAGACCCGAGAACAGGTAAGGCTTATTTCTaGCAGCTGTGTCCCAAGATCCTGCCAGCCAAAATG +
Preference number: 6 (lower is better)
Translates to: KLEDPRTGKAYF*QLCPKILPAKM
Trigger: CATTTTGGCTGGCAGGATCTTGGGACACAGCTGTCAGAAATAAGCCTTACCTGTTCTCGGGTCTTCCAGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS TCA 72 bp GGTTATTTCCACTGCATACTTTTCACCTATGCACTGTaGGTCGCTTGGGGGTGGCAGGTGAAGAAGATCCAG +
Preference number: 6 (lower is better)
Translates to: GYFHCILFTYAL*VAWGWQVKKIQ
Trigger: CTGGATCTTCTTCACCTGCCACCCCCAAGCGACTCACAGTGCATAGGTGAAAAGTATGCAGTGGAAATAACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS TCA 72 bp AGACTTGAGACCCAGGCAGGCTGCAGAGTTCCCTTGTaGCAAACCAGGATTTTTCACTCTCAGGAAACGTCA +
Preference number: 6 (lower is better)
Translates to: RLETQAGCRVPL*QTRIFHSQETS
Trigger: TGACGTTTCCTGAGAGTGAAAAATCCTGGTTTGTCACAAGGGAACTCTGCAGCCTGCCTGGGTCTCAAGTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS TCA 72 bp GGATTCTGGGCCAGAATAAGGGTCCCTATGCCAGCTTaGAGAATTCATCCTGAAAGCATCAGCACAGACAGG +
Preference number: 6 (lower is better)
Translates to: GFWARIRVPMPA*RIHPESISTDR
Trigger: CCTGTCTGTGCTGATGCTTTCAGGATGAATTCTTCAAGCTGGCATAGGGACCCTTATTCTGGCCCAGAATCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS TCA 72 bp GCGTGTGTAGCATGGATGCTGAGCATCAGTAGATGGTaGATCAACAGGAAAGCATGGAGTTTGCAGCTGCTC +
Preference number: 6 (lower is better)
Translates to: ACVAWMLSISRW*INRKAWSLQLL
Trigger: GAGCAGCTGCAAACTCCATGCTTTCCTGTTGATTCACCATCTACTGATGCTCAGCATCCATGCTACACACGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS GCA 72 bp TGCAAAGCAGCTAAGATAAGGTGCCTCATCGCACCTTaGTTGCAACTCAGCGCAGCACACAGAATGTCCTTA +
Preference number: 6 (lower is better)
Translates to: CKAAKIRCLIAP*LQLSAAHRMSL
Trigger: TAAGGACATTCTGTGTGCTGCGCTGAGTTGCAAGCAAGGTGCGATGAGGCACCTTATCTTAGCTGCTTTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS GCA 72 bp TGGGCCATGGTTCCCACTGCTGAAGAAGTAAGTTTCTaGAGTCTCGTAATGGCCAGGTGTAAGTTTGAGTGG +
Preference number: 6 (lower is better)
Translates to: WAMVPTAEEVSF*SLVMARCKFEW
Trigger: CCACTCAAACTTACACCTGGCCATTACGAGACTGCAGAAACTTACTTCTTCAGCAGTGGGAACCATGGCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS GCA 72 bp AGCCAGTATGTCCTGTGTCCAAGGCCACTTATATGTTaGAGTCTTTTAGCTCCAGTCACTCTGTCCCTCACC +
Preference number: 6 (lower is better)
Translates to: SQYVLCPRPLIC*SLLAPVTLSLT
Trigger: GGTGAGGGACAGAGTGACTGGAGCTAAAAGACTGCAACATATAAGTGGCCTTGGACACAGGACATACTGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS GCA 72 bp GATTCCTGGGAAATGGAGCTTCAAGCAGTCAGAAACTaGACTAGGCTGACTTCCTTCCTTGTGGAGCCAAAC +
Preference number: 6 (lower is better)
Translates to: DSWEMELQAVRN*TRLTSFLVEPN
Trigger: GTTTGGCTCCACAAGGAAGGAAGTCAGCCTAGTGCAGTTTCTGACTGCTTGAAGCTCCATTTCCCAGGAATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS CCA 72 bp AGCTCCGAGAGAATGGAATTCCAGTCTGCTAGGTCATaGACTGCACAGGCCAATCTCCTGGTTATTTCCACT +
Preference number: 6 (lower is better)
Translates to: SSERMEFQSARS*TAQANLLVIST
Trigger: AGTGGAAATAACCAGGAGATTGGCCTGTGCAGTCCATGACCTAGCAGACTGGAATTCCATTCTCTCGGAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS CCA 72 bp TCCAAAAGACCAACCTCCAAGCCTTGGTTTTGCAGATaGCACCAGCAAGTACTCTTCCACATCATAGCCCGA +
Preference number: 6 (lower is better)
Translates to: SKRPTSKPWFCR*HQQVLFHIIAR
Trigger: TCGGGCTATGATGTGGAAGAGTACTTGCTGGTGCCATCTGCAAAACCAAGGCTTGGAGGTTGGTCTTTTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS CAA 90 bp GCATCCTTCACTGCTCGAAGCAGCTCATTTAAAACACTGGTCTCGTaGAAGAATAGGGTATGGCATAGCACTCCCCAGACACTCCTCCAT +
Preference number: 6 (lower is better)
Translates to: ASFTARSSSFKTLVS*KNRVWHSTPQTLLH
Trigger: ATGGAGGAGTGTCTGGGGAGTGCTATGCCATACCCTATTCTTCAACGAGACCAGTGTTTTAAATGAGCTGCTTCGAGCAGTGAAGGATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS TCA 72 bp CTGCTCGAAGCAGCTCATTTAAAACACTGGTCTCGTTaGAGAATAGGGTATGGCATAGCACTCCCCAGACAC +
Preference number: 6 (lower is better)
Translates to: LLEAAHLKHWSR*RIGYGIALPRH
Trigger: GTGTCTGGGGAGTGCTATGCCATACCCTATTCTTCAACGAGACCAGTGTTTTAAATGAGCTGCTTCGAGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS TCA 72 bp GCATCAGTTTTCACTGTGGTCTCCCATGGATGGGTGTaGGATAAATCCTTCAGGACTCCAGAGAGTTCTCTG +
Preference number: 6 (lower is better)
Translates to: ASVFTVVSHGWV*DKSFRTPESSL
Trigger: CAGAGAACTCTCTGGAGTCCTGAAGGATTTATCTCACACCCATCCATGGGAGACCACAGTGAAAACTGATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS TCA 72 bp GAAAACTGTTGTAATCTGGGTGAAACAGAGTGCGTGTaGAATGTGTCCACTGAGTGTTGTTCAGGGGCAGCC +
Preference number: 6 (lower is better)
Translates to: ENCCNLGETECV*NVSTECCSGAA
Trigger: GGCTGCCCCTGAACAACACTCAGTGGACACATTTCACACGCACTCTGTTTCACCCAGATTACAACAGTTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS GCA 72 bp TCTGACAGCTGTGTCCCAAGATCCTGCCAGCCAAAATaGCCACCATGTTCTGAAACTGATCCATTTGTGTGT +
Preference number: 6 (lower is better)
Translates to: SDSCVPRSCQPK*PPCSETDPFVC
Trigger: ACACACAAATGGATCAGTTTCAGAACATGGTGGGCATTTTGGCTGGCAGGATCTTGGGACACAGCTGTCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS GCA 72 bp TGCAGAGCAGAGACAGTGTTCAGAGCTATTGAGACTTaGTCCTGTGTCAGAAAGCTAAGTCCACAGAGACTC +
Preference number: 6 (lower is better)
Translates to: CRAETVFRAIET*SCVRKLSPQRL
Trigger: GAGTCTCTGTGGACTTAGCTTTCTGACACAGGAGCAAGTCTCAATAGCTCTGAACACTGTCTCTGCTCTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS GCA 72 bp ATCTCCTGGTTATTTCCACTGCATACTTTTCACCTATaGACTGTGAGTCGCTTGGGGGTGGCAGGTGAAGAA +
Preference number: 6 (lower is better)
Translates to: ISWLFPLHTFHL*TVSRLGVAGEE
Trigger: TTCTTCACCTGCCACCCCCAAGCGACTCACAGTGCATAGGTGAAAAGTATGCAGTGGAAATAACCAGGAGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS CCA 72 bp TTCAGGAAATCCTCTGTGCTTCCTTCAGCTTCCGCATaGTTTTTGGACTGCGCGTGCTTCAAGATGAGATTC +
Preference number: 6 (lower is better)
Translates to: FRKSSVLPSASA*FLDCACFKMRF
Trigger: GAATCTCATCTTGAAGCACGCGCAGTCCAAAAACCATGCGGAAGCTGAAGGAAGCACAGAGGATTTCCTGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS CCA 72 bp GACTCCTGGTCCTTACAGAGAAGCTTCATTACAGACTaGAAAGAGGCGAAAGCTGAACTTCTGGTTTGTCCC +
Preference number: 6 (lower is better)
Translates to: DSWSLQRSFITD*KEAKAELLVCP
Trigger: GGGACAAACCAGAAGTTCAGCTTTCGCCTCTTTCCAGTCTGTAATGAAGCTTCTCTGTAAGGACCAGGAGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS CCA 72 bp ATCCTGTCTTCATTCAGCAAGGCCCCTCCATATGGGTaGCTGTACAGGGTTATTCCATATTGTCTCCAGTCT +
Preference number: 6 (lower is better)
Translates to: ILSSFSKAPPYG*LYRVIPYCLQS
Trigger: AGACTGGAGACAATATGGAATAACCCTGTACAGCCACCCATATGGAGGGGCCTTGCTGAATGAAGACAGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS CAA 90 bp GGGCTTCTGCAGCTGCTGGAAAACTTGACACATCTCAAAAACACTTaGCTCAGCTTGTGGGACTTCCTGCCAGTGCTCAATCGATACAAA +
Preference number: 6 (lower is better)
Translates to: GLLQLLENLTHLKNT*LSLWDFLPVLNRYK
Trigger: TTTGTATCGATTGAGCACTGGCAGGAAGTCCCACAAGCTGAGCAAAGTGTTTTTGAGATGTGTCAAGTTTTCCAGCAGCTGCAGAAGCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS TCA 72 bp CCATTTGTGTGTCCTGCAATGACAGCTTGCAAACTATaGCCAGCATCCTTCACTGCTCGAAGCAGCTCATTT +
Preference number: 6 (lower is better)
Translates to: PFVCPAMTACKL*PASFTARSSSF
Trigger: AAATGAGCTGCTTCGAGCAGTGAAGGATGCTGGTCATAGTTTGCAAGCTGTCATTGCAGGACACACAAATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS TCA 72 bp GATGCTGAGTTAGCTCTACTTCATCAAGAGTTTTGTTaGCTTGCTGCTGTAGCTCCTTCGTGGTCCACCAAG +
Preference number: 6 (lower is better)
Translates to: DAELALLHQEFC*LAAVAPSWSTK
Trigger: CTTGGTGGACCACGAAGGAGCTACAGCAGCAAGTCAACAAAACTCTTGATGAAGTAGAGCTAACTCAGCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS TCA 72 bp AATAAGGGTCCCTATGCCAGCTTGAAGAATTCATCCTaGAAGCATCAGCACAGACAGGGTCTTGATCTCGGA +
Preference number: 6 (lower is better)
Translates to: NKGPYASLKNSS*KHQHRQGLDLG
Trigger: TCCGAGATCAAGACCCTGTCTGTGCTGATGCTTTCAGGATGAATTCTTCAAGCTGGCATAGGGACCCTTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS GCA 72 bp GTAAGGCTTATTTCTGACAGCTGTGTCCCAAGATCCTaGCAGCCAAAATGCCCACCATGTTCTGAAACTGAT +
Preference number: 6 (lower is better)
Translates to: VRLISDSCVPRS*QPKCPPCSETD
Trigger: ATCAGTTTCAGAACATGGTGGGCATTTTGGCTGGCAGGATCTTGGGACACAGCTGTCAGAAATAAGCCTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS GCA 72 bp TTGTCCTCCAAAAGACCAACCTCCAAGCCTTGGTTTTaGAGATGGCACCAGCAAGTACTCTTCCACATCATA +
Preference number: 6 (lower is better)
Translates to: LSSKRPTSKPWF*RWHQQVLFHII
Trigger: TATGATGTGGAAGAGTACTTGCTGGTGCCATCTGCAAAACCAAGGCTTGGAGGTTGGTCTTTTGGAGGACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS CCA 72 bp GTGTCACAGCACCCATGCTATCTTCCAAGTGAGCACTaGACATGTACAGTCTGGGCAGTGAATGTAGAAAAT +
Preference number: 6 (lower is better)
Translates to: VSQHPCYLPSEH*TCTVWAVNVEN
Trigger: ATTTTCTACATTCACTGCCCAGACTGTACATGTCCAGTGCTCACTTGGAAGATAGCATGGGTGCTGTGACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS CCA 72 bp AAATCTCCCAGAGATGCTAATGAATTCAAACCCGCCTaGAGAAAGTGTGTCACAGCACCCATGCTATCTTCC +
Preference number: 6 (lower is better)
Translates to: KSPRDANEFKPA*RKCVTAPMLSS
Trigger: GGAAGATAGCATGGGTGCTGTGACACACTTTCTCCAGGCGGGTTTGAATTCATTAGCATCTCTGGGAGATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS CCA 72 bp AAACCAAATTGGGATTTGAGATCAGACTGGACTTTCTaGGGATCCCAGACGATATTCTTCAGGGACAGGTGG +
Preference number: 6 (lower is better)
Translates to: KPNWDLRSDWTF*GSQTIFFRDRW
Trigger: CCACCTGTCCCTGAAGAATATCGTCTGGGATCCCCAGAAAGTCCAGTCTGATCTCAAATCCCAATTTGGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS CCA 72 bp AGTCTGCTAGGTCATGGACTGCACAGGCCAATCTCCTaGTTATTTCCACTGCATACTTTTCACCTATGCACT +
Preference number: 6 (lower is better)
Translates to: SLLGHGLHRPIS*LFPLHTFHLCT
Trigger: AGTGCATAGGTGAAAAGTATGCAGTGGAAATAACCAGGAGATTGGCCTGTGCAGTCCATGACCTAGCAGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS CAA 72 bp ACTGCTCGAAGCAGCTCATTTAAAACACTGGTCTCGTaGAAGAATAGGGTATGGCATAGCACTCCCCAGACA +
Preference number: 6 (lower is better)
Translates to: TARSSSFKTLVS*KNRVWHSTPQT
Trigger: TGTCTGGGGAGTGCTATGCCATACCCTATTCTTCAACGAGACCAGTGTTTTAAATGAGCTGCTTCGAGCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS CAA 72 bp AAATCCTCTGTGCTTCCTTCAGCTTCCGCATGGTTTTaGGACTGCGCGTGCTTCAAGATGAGATTCATGAGA +
Preference number: 6 (lower is better)
Translates to: KSSVLPSASAWF*DCACFKMRFMR
Trigger: TCTCATGAATCTCATCTTGAAGCACGCGCAGTCCAAAAACCATGCGGAAGCTGAAGGAAGCACAGAGGATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS CAA 72 bp CAGCTGCTGGAAAACTTGACACATCTCAAAAACACTTaGCTCAGCTTGTGGGACTTCCTGCCAGTGCTCAAT +
Preference number: 6 (lower is better)
Translates to: QLLENLTHLKNT*LSLWDFLPVLN
Trigger: ATTGAGCACTGGCAGGAAGTCCCACAAGCTGAGCAAAGTGTTTTTGAGATGTGTCAAGTTTTCCAGCAGCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS CAA 72 bp TCCATTTCTCCTGGGCCATTTTGCTGTGAGAGCCCTTaGTTGCCAAAGTCCTCATTGAAGAAGAACAGACCA +
Preference number: 6 (lower is better)
Translates to: SISPGPFCCESP*LPKSSLKKNRP
Trigger: TGGTCTGTTCTTCTTCAATGAGGACTTTGGCAACAAAGGGCTCTCACAGCAAAATGGCCCAGGAGAAATGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS CAA 90 bp GTTCCCAACATTGTAGCCATCTTTCTTGAAACAATTTTGGCTAGGTaGAGAAGTCTAACCATGGAGTCCGCAGTTGAGGCAAGATGGCCT +
Preference number: 6 (lower is better)
Translates to: VPNIVAIFLETILAR*RSLTMESAVEARWP
Trigger: AGGCCATCTTGCCTCAACTGCGGACTCCATGGTTAGACTTCTCAACCTAGCCAAAATTGTTTCAAGAAAGATGGCTACAATGTTGGGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS CAA 90 bp ATGGAGAGCGTTCCCAACATTGTAGCCATCTTTCTTGAAACAATTTaGGCTAGGTTGAGAAGTCTAACCATGGAGTCCGCAGTTGAGGCA +
Preference number: 6 (lower is better)
Translates to: MESVPNIVAIFLETI*ARLRSLTMESAVEA
Trigger: TGCCTCAACTGCGGACTCCATGGTTAGACTTCTCAACCTAGCCAAAATTGTTTCAAGAAAGATGGCTACAATGTTGGGAACGCTCTCCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS TCA 72 bp TTTCTACAACTTGAGCCAGTATTACAAAGAAGTCCTTaGACAAAAGGAAGAACACCCCGGCTGGGCAGATCC +
Preference number: 6 (lower is better)
Translates to: FLQLEPVLQRSP*TKGRTPRLGRS
Trigger: GGATCTGCCCAGCCGGGGTGTTCTTCCTTTTGTTCAAGGACTTCTTTGTAATACTGGCTCAAGTTGTAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000042740.13
ENSMUST00000151522.2
CDS TCA 72 bp TGTATTCTGCAGAGCAGAGACAGTGTTCAGAGCTATTaGGACTTGCTCCTGTGTCAGAAAGCTAAGTCCACA +
Preference number: 6 (lower is better)
Translates to: CILQSRDSVQSY*DLLLCQKAKST
Trigger: TGTGGACTTAGCTTTCTGACACAGGAGCAAGTCTCAATAGCTCTGAACACTGTCTCTGCTCTGCAGAATACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS TCA 72 bp GGATGCTGCCATTACCTTGAATTCCAGAAGATGACATaGAGAGCAGTACCTTATGCCAAAATCCCTGCAGAG +
Preference number: 6 (lower is better)
Translates to: GCCHYLEFQKMT*RAVPYAKIPAE
Trigger: CTCTGCAGGGATTTTGGCATAAGGTACTGCTCTTCATGTCATCTTCTGGAATTCAAGGTAATGGCAGCATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS TCA 72 bp TGCCTTCAGGAATCTCTGGAGGTATGGCATTGGCTCTaGGCCATGAAGAATTACCATCATTTCATCCTTGGT +
Preference number: 6 (lower is better)
Translates to: CLQESLEVWHWL*AMKNYHHFILG
Trigger: ACCAAGGATGAAATGATGGTAATTCTTCATGGCTCAGAGCCAATGCCATACCTCCAGAGATTCCTGAAGGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS TCA 72 bp GTCCGGATTGTATATGTGACGTGGGGTGGCAATTTGTaGGGTGCTGATCTAATGTGTCTATGTCTCAAGGAA +
Preference number: 6 (lower is better)
Translates to: VRIVYVTWGGNL*GADLMCLCLKE
Trigger: TTCCTTGAGACATAGACACATTAGATCAGCACCTCACAAATTGCCACCCCACGTCACATATACAATCCGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS TCA 72 bp CCAAAGGCTGTGGTTGAAAGCAAGCACAGAAGAGTCTaGATAGCGAAACTGAGTTGGTTATGTAGGACCAAC +
Preference number: 6 (lower is better)
Translates to: PKAVVESKHRRV*IAKLSWLCRTN
Trigger: GTTGGTCCTACATAACCAACTCAGTTTCGCTATTCAGACTCTTCTGTGCTTGCTTTCAACCACAGCCTTTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS TCA 72 bp CTGGTTGTACCACACCTTCGCCAAAGTCCTTGGTTTTaGTGTGTTTGTCTTCACATCTTCAGCATCATTGGG +
Preference number: 6 (lower is better)
Translates to: LVVPHLRQSPWF*CVCLHIFSIIG
Trigger: CCCAATGATGCTGAAGATGTGAAGACAAACACATCAAAACCAAGGACTTTGGCGAAGGTGTGGTACAACCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS TCA 72 bp CATTGGCAGGTAAGTGATGCCACAAGATCAGGTTGTTaGGATGATTCAGGTAGGAGGGTAGAGAATGGAAAC +
Preference number: 6 (lower is better)
Translates to: HWQVSDATRSGC*DDSGRRVENGN
Trigger: GTTTCCATTCTCTACCCTCCTACCTGAATCATCTCAACAACCTGATCTTGTGGCATCACTTACCTGCCAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS TCA 72 bp CATTGTAGATTTTCTGCAAATTCTGAGCTTTGGAAATaGTGGCCAAGAGCCGGGGCATGGTGGTCATCAACA +
Preference number: 6 (lower is better)
Translates to: HCRFSANSELWK*WPRAGAWWSST
Trigger: TGTTGATGACCACCATGCCCCGGCTCTTGGCCATCATTTCCAAAGCTCAGAATTTGCAGAAAATCTACAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS GCA 72 bp CTTAGGGTTTTTCTCAAGCCTGAAAGTTGTGTAGTTTaGGCACCAAACCCTGGTAAGGCACATCAAAGCTTC +
Preference number: 6 (lower is better)
Translates to: LRVFLKPESCVV*APNPGKAHQSF
Trigger: GAAGCTTTGATGTGCCTTACCAGGGTTTGGTGCGCAAACTACACAACTTTCAGGCTTGAGAAAAACCCTAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS GCA 72 bp CTAGGGACAAAACTCACCTCTGCAGTGACATCGCTATaGAATCCATTTATCACGGAGGAGAAGAATGTCTCT +
Preference number: 6 (lower is better)
Translates to: LGTKLTSAVTSL*NPFITEEKNVS
Trigger: AGAGACATTCTTCTCCTCCGTGATAAATGGATTGCATAGCGATGTCACTGCAGAGGTGAGTTTTGTCCCTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS GCA 72 bp AGCACACAGAATGTCCTTAGTCAGGGAAGGATTTTCTaGAAAGATAATGAGCACCCGCAGAGCCATCATTTC +
Preference number: 6 (lower is better)
Translates to: STQNVLSQGRIF*KDNEHPQSHHF
Trigger: GAAATGATGGCTCTGCGGGTGCTCATTATCTTTGCAGAAAATCCTTCCCTGACTAAGGACATTCTGTGTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS GCA 72 bp GTTAGCTCTACTTCATCAAGAGTTTTGTTGACTTGCTaGTGTAGCTCCTTCGTGGTCCACCAAGGTGCTTTT +
Preference number: 6 (lower is better)
Translates to: VSSTSSRVLLTC*CSSFVVHQGAF
Trigger: AAAAGCACCTTGGTGGACCACGAAGGAGCTACAGCAGCAAGTCAACAAAACTCTTGATGAAGTAGAGCTAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS CCA 72 bp AAACTATTCTCAGGTGAGGTATCAGCTCTTGGAAGCTaGAAGACCCGAGAACAGGTAAGGCTTATTTCTGAC +
Preference number: 6 (lower is better)
Translates to: KLFSGEVSALGS*KTREQVRLISD
Trigger: GTCAGAAATAAGCCTTACCTGTTCTCGGGTCTTCCAGCTTCCAAGAGCTGATACCTCACCTGAGAATAGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS CCA 72 bp AGAAATCCAAATGGCCTTCGGCATCAGTTTTCACTGTaGTCTCCCATGGATGGGTGTGAGATAAATCCTTCA +
Preference number: 6 (lower is better)
Translates to: RNPNGLRHQFSL*SPMDGCEINPS
Trigger: TGAAGGATTTATCTCACACCCATCCATGGGAGACCACAGTGAAAACTGATGCCGAAGGCCATTTGGATTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS CCA 72 bp GCTGAACTTCTGGTTTGTCCCTTTGATGAAACCTGTTaGAAGTCTGGCATGTCCAGCAAGGCAGTGATTTTA +
Preference number: 6 (lower is better)
Translates to: AELLVCPFDETC*KSGMSSKAVIL
Trigger: TAAAATCACTGCCTTGCTGGACATGCCAGACTTCCAACAGGTTTCATCAAAGGGACAAACCAGAAGTTCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS CAA 72 bp ATTTCTCCTGGGCCATTTTGCTGTGAGAGCCCTTTGTaGCCAAAGTCCTCATTGAAGAAGAACAGACCAGAA +
Preference number: 6 (lower is better)
Translates to: ISPGPFCCESPL*PKSSLKKNRPE
Trigger: TTCTGGTCTGTTCTTCTTCAATGAGGACTTTGGCAACAAAGGGCTCTCACAGCAAAATGGCCCAGGAGAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS CAA 72 bp CATGTCTCCTCCAGTTCTTCCTTCAAGCACCCTCATTaGCTCTGTTTCAACATCTATGTCCTTAGCAGGCTT +
Preference number: 6 (lower is better)
Translates to: HVSSSSSFKHPH*LCFNIYVLSRL
Trigger: AAGCCTGCTAAGGACATAGATGTTGAAACAGAGCAAATGAGGGTGCTTGAAGGAAGAACTGGAGGAGACATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS CAA 90 bp GATGGTATAGGTCAGCTCACCTCCACAGCTATCTTTGAGGAATGCTaGTGGAATATAGATCTGTATCAAGGATGTAACACGAGCCACATC +
Preference number: 6 (lower is better)
Translates to: DGIGQLTSTAIFEEC*WNIDLYQGCNTSHI
Trigger: GATGTGGCTCGTGTTACATCCTTGATACAGATCTATATTCCACAAGCATTCCTCAAAGATAGCTGTGGAGGTGAGCTGACCTATACCATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS CAA 90 bp GAGAATGGAAACCCTTCTGGTTGTACCACACCTTCGCCAAAGTCCTaGGTTTTGATGTGTTTGTCTTCACATCTTCAGCATCATTGGGTA +
Preference number: 6 (lower is better)
Translates to: ENGNPSGCTTPSPKS*VLMCLSSHLQHHWV
Trigger: TACCCAATGATGCTGAAGATGTGAAGACAAACACATCAAAACCAAGGACTTTGGCGAAGGTGTGGTACAACCAGAAGGGTTTCCATTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS CAA 90 bp CAACACCATCATGTCTCCTCCAGTTCTTCCTTCAAGCACCCTCATTaGCTCTGTTTCAACATCTATGTCCTTAGCAGGCTTAACTATGTC +
Preference number: 6 (lower is better)
Translates to: QHHHVSSSSSFKHPH*LCFNIYVLSRLNYV
Trigger: GACATAGTTAAGCCTGCTAAGGACATAGATGTTGAAACAGAGCAAATGAGGGTGCTTGAAGGAAGAACTGGAGGAGACATGATGGTGTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS TCA 72 bp CCATCCTTCAGACCCAGCAGGTATAAAATCTTTTGCTaGCCTCTCCAGGTAGCTGAGGAATTCTTGAACAAA +
Preference number: 6 (lower is better)
Translates to: PSFRPSRYKIFC*PLQVAEEFLNK
Trigger: TTTGTTCAAGAATTCCTCAGCTACCTGGAGAGGTCAGCAAAAGATTTTATACCTGCTGGGTCTGAAGGATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS TCA 72 bp CATGTTCTGAAACTGATCCATTTGTGTGTCCTGCAATaGCAGCTTGCAAACTATGACCAGCATCCTTCACTG +
Preference number: 6 (lower is better)
Translates to: HVLKLIHLCVLQ*QLANYDQHPSL
Trigger: CAGTGAAGGATGCTGGTCATAGTTTGCAAGCTGTCATTGCAGGACACACAAATGGATCAGTTTCAGAACATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS TCA 72 bp CTAGTAGGACAGAGTTCTGGGATGCTGCCATTACCTTaGATTCCAGAAGATGACATGAAGAGCAGTACCTTA +
Preference number: 6 (lower is better)
Translates to: LVGQSSGMLPLP*IPEDDMKSSTL
Trigger: TAAGGTACTGCTCTTCATGTCATCTTCTGGAATTCAAGGTAATGGCAGCATCCCAGAACTCTGTCCTACTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS TCA 72 bp GGATGGTATAGGTCAGCTCACCTCCACAGCTATCTTTaGGGAATGCTTGTGGAATATAGATCTGTATCAAGG +
Preference number: 6 (lower is better)
Translates to: GWYRSAHLHSYL*GMLVEYRSVSR
Trigger: CCTTGATACAGATCTATATTCCACAAGCATTCCTCAAAGATAGCTGTGGAGGTGAGCTGACCTATACCATCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS TCA 72 bp GAAGTTCAAGGAGATGTAGGAGATGAAGGCCACATCTaGACTGGAGAAGATTCTGGACATCAGATACATCCA +
Preference number: 6 (lower is better)
Translates to: EVQGDVGDEGHI*TGEDSGHQIHP
Trigger: TGGATGTATCTGATGTCCAGAATCTTCTCCAGTTCAGATGTGGCCTTCATCTCCTACATCTCCTTGAACTTC
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS GCA 72 bp AGAGAACCTTTGAATGGGAAATGTTGGCTTCTAAGATaGTGTGGATGGTTTCCTCAGAGATGTGGAAGAAGG +
Preference number: 6 (lower is better)
Translates to: REPLNGKCWLLR*CGWFPQRCGRR
Trigger: CCTTCTTCCACATCTCTGAGGAAACCATCCACAGCATCTTAGAAGCCAACATTTCCCATTCAAAGGTTCTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS GCA 72 bp GATGGTGAATCAACAGGAAAGCATGGAGTTTGCAGCTaGTCAGTGGCAAAATTAACAAAGACCTGTTCCAGA +
Preference number: 6 (lower is better)
Translates to: DGESTGKHGVCS*SVAKLTKTCSR
Trigger: TCTGGAACAGGTCTTTGTTAATTTTGCCACTGAGCAGCTGCAAACTCCATGCTTTCCTGTTGATTCACCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS CCA 72 bp TGCTATCTTCCAAGTGAGCACTGGACATGTACAGTCTaGGCAGTGAATGTAGAAAATCCCAAATATGAGGCT +
Preference number: 6 (lower is better)
Translates to: CYLPSEHWTCTV*AVNVENPKYEA
Trigger: AGCCTCATATTTGGGATTTTCTACATTCACTGCCCAGACTGTACATGTCCAGTGCTCACTTGGAAGATAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS CCA 72 bp TCATTTAAAACACTGGTCTCGTTGAAGAATAGGGTATaGCATAGCACTCCCCAGACACTCCTCCATATGCTA +
Preference number: 6 (lower is better)
Translates to: SFKTLVSLKNRV*HSTPQTLLHML
Trigger: TAGCATATGGAGGAGTGTCTGGGGAGTGCTATGCCATACCCTATTCTTCAACGAGACCAGTGTTTTAAATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS CCA 72 bp AAAGCGATGGTAAGGACACTGGAGAGAACCTTTGAATaGGAAATGTTGGCTTCTAAGATGCTGTGGATGGTT +
Preference number: 6 (lower is better)
Translates to: KAMVRTLERTFE*EMLASKMLWMV
Trigger: AACCATCCACAGCATCTTAGAAGCCAACATTTCCCATTCAAAGGTTCTCTCCAGTGTCCTTACCATCGCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS CCA 72 bp CAGCTCACCTCCACAGCTATCTTTGAGGAATGCTTGTaGAATATAGATCTGTATCAAGGATGTAACACGAGC +
Preference number: 6 (lower is better)
Translates to: QLTSTAIFEECL*NIDLYQGCNTS
Trigger: GCTCGTGTTACATCCTTGATACAGATCTATATTCCACAAGCATTCCTCAAAGATAGCTGTGGAGGTGAGCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS CAA 72 bp AACATCCGTCCATATGTCTGCAGATCTTCAGTGAGCTaGTCCATGTCAATATGCAACTGGCTCTCTACAAAG +
Preference number: 6 (lower is better)
Translates to: NIRPYVCRSSVS*SMSICNWLSTK
Trigger: CTTTGTAGAGAGCCAGTTGCATATTGACATGGACAAGCTCACTGAAGATCTGCAGACATATGGACGGATGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS CAA 72 bp TCTGGTTGTACCACACCTTCGCCAAAGTCCTTGGTTTaGATGTGTTTGTCTTCACATCTTCAGCATCATTGG +
Preference number: 6 (lower is better)
Translates to: SGCTTPSPKSLV*MCLSSHLQHHW
Trigger: CCAATGATGCTGAAGATGTGAAGACAAACACATCAAAACCAAGGACTTTGGCGAAGGTGTGGTACAACCAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS CAA 72 bp AACCCTTCTGGTTGTACCACACCTTCGCCAAAGTCCTaGGTTTTGATGTGTTTGTCTTCACATCTTCAGCAT +
Preference number: 6 (lower is better)
Translates to: NPSGCTTPSPKS*VLMCLSSHLQH
Trigger: ATGCTGAAGATGTGAAGACAAACACATCAAAACCAAGGACTTTGGCGAAGGTGTGGTACAACCAGAAGGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS CAA 90 bp CAATCGATACAAATAATGCCTTCAGGAATCTCTGGAGGTATGGCATaGGCTCTGAGCCATGAAGAATTACCATCATTTCATCCTTGGTCC +
Preference number: 6 (lower is better)
Translates to: QSIQIMPSGISGGMA*ALSHEELPSFHPWS
Trigger: GGACCAAGGATGAAATGATGGTAATTCTTCATGGCTCAGAGCCAATGCCATACCTCCAGAGATTCCTGAAGGCATTATTTGTATCGATTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS TCA 72 bp TATCTAACATCCGTCCATATGTCTGCAGATCTTCAGTaGGCTTGTCCATGTCAATATGCAACTGGCTCTCTA +
Preference number: 6 (lower is better)
Translates to: YLTSVHMSADLQ*ACPCQYATGSL
Trigger: TAGAGAGCCAGTTGCATATTGACATGGACAAGCTCACTGAAGATCTGCAGACATATGGACGGATGTTAGATA
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS TCA 72 bp TGTGATGAAAAAGACTCCTTGTCCAAAGGCTGTGGTTaGAAGCAAGCACAGAAGAGTCTGAATAGCGAAACT +
Preference number: 6 (lower is better)
Translates to: CDEKDSLSKGCG*KQAQKSLNSET
Trigger: AGTTTCGCTATTCAGACTCTTCTGTGCTTGCTTTCAACCACAGCCTTTGGACAAGGAGTCTTTTTCATCACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS TCA 72 bp CCATCAGACCACATATGCTCTTCCAATATGATGCAGTaGAGGGGAAATACCATGGTTTCCCTAAACCAAAAG +
Preference number: 6 (lower is better)
Translates to: PSDHICSSNMMQ*RGNTMVSLNQK
Trigger: CTTTTGGTTTAGGGAAACCATGGTATTTCCCCTTCACTGCATCATATTGGAAGAGCATATGTGGTCTGATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS GCA 72 bp TCAGTAGATGGTGAATCAACAGGAAAGCATGGAGTTTaGAGCTGCTCAGTGGCAAAATTAACAAAGACCTGT +
Preference number: 6 (lower is better)
Translates to: SVDGESTGKHGV*SCSVAKLTKTC
Trigger: ACAGGTCTTTGTTAATTTTGCCACTGAGCAGCTGCAAACTCCATGCTTTCCTGTTGATTCACCATCTACTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS CCA 72 bp AAGTCATTGAAACCAAATTGGGATTTGAGATCAGACTaGACTTTCTGGGGATCCCAGACGATATTCTTCAGG +
Preference number: 6 (lower is better)
Translates to: KSLKPNWDLRSD*TFWGSQTIFFR
Trigger: CCTGAAGAATATCGTCTGGGATCCCCAGAAAGTCCAGTCTGATCTCAAATCCCAATTTGGTTTCAATGACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS CCA 72 bp AATCCAGGAGTTCCAGAAGTTGAGGAAGTTGCACAGTaGTGTTTTGAAGACCTGCACCTTGGATATTTTTGT +
Preference number: 6 (lower is better)
Translates to: NPGVPEVEEVAQ*CFEDLHLGYFC
Trigger: ACAAAAATATCCAAGGTGCAGGTCTTCAAAACACCACTGTGCAACTTCCTCAACTTCTGGAACTCCTGGATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS CAA 72 bp GTGGGTCTTAGAAGTAAATCCTTGAAGTGCTTCCAGTaGGACTGGGAAGCAACATTGAGATCTTCTGTTAAG +
Preference number: 6 (lower is better)
Translates to: VGLRSKSLKCFQ*DWEATLRSSVK
Trigger: CTTAACAGAAGATCTCAATGTTGCTTCCCAGTCCAACTGGAAGCACTTCAAGGATTTACTTCTAAGACCCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS CAA 72 bp CTGTCTACAAATTTTTCCACTAAGCCCACAAGCATATaGACCCCCAAGTTGTCAATACCTGATCTGCTGAGA +
Preference number: 6 (lower is better)
Translates to: LSTNFSTKPTSI*TPKLSIPDLLR
Trigger: TCTCAGCAGATCAGGTATTGACAACTTGGGGGTCAATATGCTTGTGGGCTTAGTGGAAAAATTTGTAGACAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS CAA 72 bp ATTGTAGCCATCTTTCTTGAAACAATTTTGGCTAGGTaGAGAAGTCTAACCATGGAGTCCGCAGTTGAGGCA +
Preference number: 6 (lower is better)
Translates to: IVAIFLETILAR*RSLTMESAVEA
Trigger: TGCCTCAACTGCGGACTCCATGGTTAGACTTCTCAACCTAGCCAAAATTGTTTCAAGAAAGATGGCTACAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS CAA 72 bp GTTCCCAACATTGTAGCCATCTTTCTTGAAACAATTTaGGCTAGGTTGAGAAGTCTAACCATGGAGTCCGCA +
Preference number: 6 (lower is better)
Translates to: VPNIVAIFLETI*ARLRSLTMESA
Trigger: TGCGGACTCCATGGTTAGACTTCTCAACCTAGCCAAAATTGTTTCAAGAAAGATGGCTACAATGTTGGGAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS CAA 72 bp TGTGTTTGTCTTCACATCTTCAGCATCATTGGGTATTaGTCCTCCAAAAGACCAACCTCCAAGCCTTGGTTT +
Preference number: 6 (lower is better)
Translates to: CVCLHIFSIIGY*SSKRPTSKPWF
Trigger: AAACCAAGGCTTGGAGGTTGGTCTTTTGGAGGACAAATACCCAATGATGCTGAAGATGTGAAGACAAACACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS CAA 72 bp ACCACACCTTCGCCAAAGTCCTTGGTTTTGATGTGTTaGTCTTCACATCTTCAGCATCATTGGGTATTTGTC +
Preference number: 6 (lower is better)
Translates to: TTPSPKSLVLMC*SSHLQHHWVFV
Trigger: GACAAATACCCAATGATGCTGAAGATGTGAAGACAAACACATCAAAACCAAGGACTTTGGCGAAGGTGTGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS CAA 90 bp TTCTGTAGAACTTTCCTGTACAAGGTAGAGAACAGACCTGAGATTTaGGTTGAATTTGGAGAGGTCCTCAGAACTATTAACCTGGGAGAG +
Preference number: 6 (lower is better)
Translates to: FCRTFLYKVENRPEI*VEFGEVLRTINLGE
Trigger: CTCTCCCAGGTTAATAGTTCTGAGGACCTCTCCAAATTCAACCAAAATCTCAGGTCTGTTCTCTACCTTGTACAGGAAAGTTCTACAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS TCA 72 bp GCAGCATCATGGGAGTCTGCCTTTAAACGCTTTAAATaGGTTAGCCATGAAACAGTTGCATTGAAAACAAGC +
Preference number: 6 (lower is better)
Translates to: AASWESAFKRFK*VSHETVALKTS
Trigger: GCTTGTTTTCAATGCAACTGTTTCATGGCTAACTCATTTAAAGCGTTTAAAGGCAGACTCCCATGATGCTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS TCA 72 bp GTCTCTCATTCTGAGGCTCTACTTTGTTGTCTGGAGTaGTGTAAGACTTTTTGTTGGTATCTTGCAGAAGCA +
Preference number: 6 (lower is better)
Translates to: VSHSEALLCCLE*CKTFCWYLAEA
Trigger: TGCTTCTGCAAGATACCAACAAAAAGTCTTACATCACTCCAGACAACAAAGTAGAGCCTCAGAATGAGAGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS GCA 72 bp TTCAAGGATTTTATCTCTAGGGACAAAACTCACCTCTaGAGTGACATCGCTATGCAATCCATTTATCACGGA +
Preference number: 6 (lower is better)
Translates to: FKDFISRDKTHL*SDIAMQSIYHG
Trigger: TCCGTGATAAATGGATTGCATAGCGATGTCACTGCAGAGGTGAGTTTTGTCCCTAGAGATAAAATCCTTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS GCA 72 bp ATAGGTCAGCTCACCTCCACAGCTATCTTTGAGGAATaGTTGTGGAATATAGATCTGTATCAAGGATGTAAC +
Preference number: 6 (lower is better)
Translates to: IGQLTSTAIFEE*LWNIDLYQGCN
Trigger: GTTACATCCTTGATACAGATCTATATTCCACAAGCATTCCTCAAAGATAGCTGTGGAGGTGAGCTGACCTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS CCA 72 bp TACAGGTCTCTCATTCTGAGGCTCTACTTTGTTGTCTaGAGTGATGTAAGACTTTTTGTTGGTATCTTGCAG +
Preference number: 6 (lower is better)
Translates to: YRSLILRLYFVV*SDVRLFVGILQ
Trigger: CTGCAAGATACCAACAAAAAGTCTTACATCACTCCAGACAACAAAGTAGAGCCTCAGAATGAGAGACCTGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS CAA 72 bp TATGAGCCTAGCAGTAAGGTATGTGGGAACTATTCCTaGGCAGTCTTTAGAAATGTTCCCATAATTTCCCAG +
Preference number: 6 (lower is better)
Translates to: YEPSSKVCGNYS*AVFRNVPIISQ
Trigger: CTGGGAAATTATGGGAACATTTCTAAAGACTGCCAAGGAATAGTTCCCACATACCTTACTGCTAGGCTCATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS CAA 72 bp TCCTTGAAGTGCTTCCAGTTGGACTGGGAAGCAACATaGAGATCTTCTGTTAAGTTGGTAATGATCATGTCT +
Preference number: 6 (lower is better)
Translates to: SLKCFQLDWEAT*RSSVKLVMIMS
Trigger: AGACATGATCATTACCAACTTAACAGAAGATCTCAATGTTGCTTCCCAGTCCAACTGGAAGCACTTCAAGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS CAA 72 bp GTCTTGAGACCTGAGAAAATGTTCATCAATGGGTTTTaGTTCATCCAGGTAAGGAACGGATCCAGTTTCAGA +
Preference number: 6 (lower is better)
Translates to: VLRPEKMFINGF*FIQVRNGSSFR
Trigger: TCTGAAACTGGATCCGTTCCTTACCTGGATGAACAAAAACCCATTGATGAACATTTTCTCAGGTCTCAAGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS CAA 72 bp TTTGTTTCTCAGGGCATCCTGCAACTGGTTGAACATTaGACCATTTCCACTTCCCTGGAAAAGTTTGGATAT +
Preference number: 6 (lower is better)
Translates to: FVSQGILQLVEH*TISTSLEKFGY
Trigger: ATATCCAAACTTTTCCAGGGAAGTGGAAATGGTCAAATGTTCAACCAGTTGCAGGATGCCCTGAGAAACAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS CAA 72 bp GTTGTCTGGAGTGATGTAAGACTTTTTGTTGGTATCTaGCAGAAGCATCAAAAACACCTCTTCCAAGGTGGT +
Preference number: 6 (lower is better)
Translates to: VVWSDVRLFVGI*QKHQKHLFQGG
Trigger: ACCACCTTGGAAGAGGTGTTTTTGATGCTTCTGCAAGATACCAACAAAAAGTCTTACATCACTCCAGACAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS CAA 90 bp TGCTTCCAGTTGGACTGGGAAGCAACATTGAGATCTTCTGTTAAGTaGGTAATGATCATGTCTACCTGCTTTGTGGAATCATTGAAAAGA +
Preference number: 6 (lower is better)
Translates to: CFQLDWEATLRSSVK*VMIMSTCFVESLKR
Trigger: TCTTTTCAATGATTCCACAAAGCAGGTAGACATGATCATTACCAACTTAACAGAAGATCTCAATGTTGCTTCCCAGTCCAACTGGAAGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS CAA 90 bp GAATGTGAACTGTCTACAAATTTTTCCACTAAGCCCACAAGCATATaGACCCCCAAGTTGTCAATACCTGATCTGCTGAGATTCTTAAAG +
Preference number: 6 (lower is better)
Translates to: ECELSTNFSTKPTSI*TPKLSIPDLLRFLK
Trigger: CTTTAAGAATCTCAGCAGATCAGGTATTGACAACTTGGGGGTCAATATGCTTGTGGGCTTAGTGGAAAAATTTGTAGACAGTTCACATTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS TCA 72 bp TCATGTTCACATATCGAGCCAATTCACATGTCTTCCTaGCGATTTTTGAGAGGATTTTCCAGTAGGACTTCT +
Preference number: 6 (lower is better)
Translates to: SCSHIEPIHMSS*RFLRGFSSRTS
Trigger: AGAAGTCCTACTGGAAAATCCTCTCAAAAATCGTCAGGAAGACATGTGAATTGGCTCGATATGTGAACATGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS TCA 72 bp ATGTTCATCTGTCCATTTTCAAGGGTGTGCAACTTCTaGTCCACCACTAAAAGGTGCTTTGTGAAATTGAAG +
Preference number: 6 (lower is better)
Translates to: MFICPFSRVCNF*STTKRCFVKLK
Trigger: CTTCAATTTCACAAAGCACCTTTTAGTGGTGGATCAGAAGTTGCACACCCTTGAAAATGGACAGATGAACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS TCA 72 bp GTTGAATTCCCACTGGCCACGGCATTGAGTAGACTTTaGATAAACCTAAAGAAGTCTCCATTTTCATACTCA +
Preference number: 6 (lower is better)
Translates to: VEFPLATALSRL*INLKKSPFSYS
Trigger: TGAGTATGAAAATGGAGACTTCTTTAGGTTTATTCAAAGTCTACTCAATGCCGTGGCCAGTGGGAATTCAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS TCA 72 bp TGTGAAATTGCTAAGAAATGTCATAGCAGGAATCTTTaGCATCCAAACCTCCTCAAGACTTTTGGTCAGCCT +
Preference number: 6 (lower is better)
Translates to: CEIAKKCHSRNL*HPNLLKTFGQP
Trigger: AGGCTGACCAAAAGTCTTGAGGAGGTTTGGATGTCAAAGATTCCTGCTATGACATTTCTTAGCAATTTCACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS TCA 72 bp TCATGTCTTGAAGTGGGACAAAAATGTAGTTATATTTaGATCCGCCGGCTGGTAGATTCTGAGGATGAAACT +
Preference number: 6 (lower is better)
Translates to: SCLEVGQKCSYI*IRRLVDSEDET
Trigger: AGTTTCATCCTCAGAATCTACCAGCCGGCGGATTCAAATATAACTACATTTTTGTCCCACTTCAAGACATGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS GCA 72 bp TGGTTAAACATCTTATCTAACATCCGTCCATATGTCTaGAGATCTTCAGTGAGCTTGTCCATGTCAATATGC +
Preference number: 6 (lower is better)
Translates to: WLNILSNIRPYV*RSSVSLSMSIC
Trigger: GCATATTGACATGGACAAGCTCACTGAAGATCTGCAGACATATGGACGGATGTTAGATAAGATGTTTAACCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS CCA 72 bp CTTAGAAGTAAATCCTTGAAGTGCTTCCAGTTGGACTaGGAAGCAACATTGAGATCTTCTGTTAAGTTGGTA +
Preference number: 6 (lower is better)
Translates to: LRSKSLKCFQLD*EATLRSSVKLV
Trigger: TACCAACTTAACAGAAGATCTCAATGTTGCTTCCCAGTCCAACTGGAAGCACTTCAAGGATTTACTTCTAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS CAA 72 bp TTGGACTGGGAAGCAACATTGAGATCTTCTGTTAAGTaGGTAATGATCATGTCTACCTGCTTTGTGGAATCA +
Preference number: 6 (lower is better)
Translates to: LDWEATLRSSVK*VMIMSTCFVES
Trigger: TGATTCCACAAAGCAGGTAGACATGATCATTACCAACTTAACAGAAGATCTCAATGTTGCTTCCCAGTCCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS CAA 72 bp AGTAACTGTCCTAGGCTCCAGTTACTAGTTAGATCTTaGGGAATCTGTTTAAAGTCCAACCACAGTTCTTCA +
Preference number: 6 (lower is better)
Translates to: SNCPRLQLLVRS*GICLKSNHSSS
Trigger: TGAAGAACTGTGGTTGGACTTTAAACAGATTCCCAAAGATCTAACTAGTAACTGGAGCCTAGGACAGTTACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS CAA 72 bp GAGTTCCAGAAGTTGAGGAAGTTGCACAGTGGTGTTTaGAAGACCTGCACCTTGGATATTTTTGTTAATATC +
Preference number: 6 (lower is better)
Translates to: EFQKLRKLHSGV*KTCTLDIFVNI
Trigger: GATATTAACAAAAATATCCAAGGTGCAGGTCTTCAAAACACCACTGTGCAACTTCCTCAACTTCTGGAACTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS CAA 72 bp ACTTTCCTGTACAAGGTAGAGAACAGACCTGAGATTTaGGTTGAATTTGGAGAGGTCCTCAGAACTATTAAC +
Preference number: 6 (lower is better)
Translates to: TFLYKVENRPEI*VEFGEVLRTIN
Trigger: GTTAATAGTTCTGAGGACCTCTCCAAATTCAACCAAAATCTCAGGTCTGTTCTCTACCTTGTACAGGAAAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS CAA 90 bp TCTACAAATTTTTCCACTAAGCCCACAAGCATATTGACCCCCAAGTaGTCAATACCTGATCTGCTGAGATTCTTAAAGAAACTCATTAGG +
Preference number: 6 (lower is better)
Translates to: STNFSTKPTSILTPK*SIPDLLRFLKKLIR
Trigger: CCTAATGAGTTTCTTTAAGAATCTCAGCAGATCAGGTATTGACAACTTGGGGGTCAATATGCTTGTGGGCTTAGTGGAAAAATTTGTAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS CAA 90 bp ATATCGGAAAGTAACTGTCCTAGGCTCCAGTTACTAGTTAGATCTTaGGGAATCTGTTTAAAGTCCAACCACAGTTCTTCAATGTTGGAA +
Preference number: 6 (lower is better)
Translates to: ISESNCPRLQLLVRS*GICLKSNHSSSMLE
Trigger: TTCCAACATTGAAGAACTGTGGTTGGACTTTAAACAGATTCCCAAAGATCTAACTAGTAACTGGAGCCTAGGACAGTTACTTTCCGATAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS CAA 90 bp ATCTTATCTAACATCCGTCCATATGTCTGCAGATCTTCAGTGAGCTaGTCCATGTCAATATGCAACTGGCTCTCTACAAAGTTTCTTATA +
Preference number: 6 (lower is better)
Translates to: ILSNIRPYVCRSSVS*SMSICNWLSTKFLI
Trigger: TATAAGAAACTTTGTAGAGAGCCAGTTGCATATTGACATGGACAAGCTCACTGAAGATCTGCAGACATATGGACGGATGTTAGATAAGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS CCA 72 bp CTGGGTAAGGAACTTGAGTTATACATTATACACAGATaGTTTATGATATCTATCCATGTGATGCACCCTTCC +
Preference number: 6 (lower is better)
Translates to: LGKELELYIIHR*FMISIHVMHPS
Trigger: GGAAGGGTGCATCACATGGATAGATATCATAAACCATCTGTGTATAATGTATAACTCAAGTTCCTTACCCAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS CCA 72 bp TTAATGAACATGTTAGAATTGCTGAGGAAAGACTCCTaGTCCTTACAGAGAAGCTTCATTACAGACTGGAAA +
Preference number: 6 (lower is better)
Translates to: LMNMLELLRKDS*SLQRSFITDWK
Trigger: TTTCCAGTCTGTAATGAAGCTTCTCTGTAAGGACCAGGAGTCTTTCCTCAGCAATTCTAACATGTTCATTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS CAA 72 bp GAGGATTTTCCAGTAGGACTTCTTTTGCGTAGACATTaGTACATCTTCAAGTATGTGAGATACCACTATGGA +
Preference number: 6 (lower is better)
Translates to: EDFPVGLLLRRH*YIFKYVRYHYG
Trigger: TCCATAGTGGTATCTCACATACTTGAAGATGTACAAATGTCTACGCAAAAGAAGTCCTACTGGAAAATCCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS CAA 72 bp CCTTCAATGTTAGTTCTTTCTTCTTGTGGAATGCCATaGAGCCGGAATTCTTGCAGTTCTGAATTCATTTCA +
Preference number: 6 (lower is better)
Translates to: PSMLVLSSCGMP*SRNSCSSEFIS
Trigger: TGAAATGAATTCAGAACTGCAAGAATTCCGGCTCAATGGCATTCCACAAGAAGAAAGAACTAACATTGAAGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS CAA 72 bp AGCATCCAAGTTAAAATGTTCAATGCAGAGCTCATTTaGTCCCCCATATCCTTAAAGCTTCCCAGTATGTTA +
Preference number: 6 (lower is better)
Translates to: SIQVKMFNAELI*SPISLKLPSML
Trigger: TAACATACTGGGAAGCTTTAAGGATATGGGGGACAAAATGAGCTCTGCATTGAACATTTTAACTTGGATGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS CAA 72 bp TCATTAACTCTGGGTAAATTAATGAACATGTTAGAATaGCTGAGGAAAGACTCCTGGTCCTTACAGAGAAGC +
Preference number: 6 (lower is better)
Translates to: SLTLGKLMNMLE*LRKDSWSLQRS
Trigger: GCTTCTCTGTAAGGACCAGGAGTCTTTCCTCAGCAATTCTAACATGTTCATTAATTTACCCAGAGTTAATGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS TCA 72 bp TTATTTGCTTCACATGATGTGGAACACTTTGTAGCATaGAGGAATACAAAGTGTCAAGGAATTTCCCAGAGT +
Preference number: 6 (lower is better)
Translates to: LFASHDVEHFVA*RNTKCQGISQS
Trigger: ACTCTGGGAAATTCCTTGACACTTTGTATTCCTTCATGCTACAAAGTGTTCCACATCATGTGAAGCAAATAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS TCA 72 bp TATCTTCCTTTAAGCCATTCCAAAGAGCTTGTAAGGTaGGGTCAATCACCATTTTCAAGAAAGTCTCTCTTT +
Preference number: 6 (lower is better)
Translates to: YLPLSHSKELVR*GQSPFSRKSLF
Trigger: AAAGAGAGACTTTCTTGAAAATGGTGATTGACCTCACCTTACAAGCTCTTTGGAATGGCTTAAAGGAAGATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS TCA 72 bp CAATATTCAGGAGGCTCTTGTTGTTCTCAAGAACTTTaGACAAATCAGCTAAACACTCCCAACTCTTTTGTA +
Preference number: 6 (lower is better)
Translates to: QYSGGSCCSQEL*TNQLNTPNSFV
Trigger: TACAAAAGAGTTGGGAGTGTTTAGCTGATTTGTTCAAAGTTCTTGAGAACAACAAGAGCCTCCTGAATATTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS CAA 72 bp AAACTGCTTTATGAGGTCCAAAATGTGTCTGGAGATTaGAGTAAAATAAGCTATCAGAGGCTCTCTATTCTG +
Preference number: 6 (lower is better)
Translates to: KLLYEVQNVSGD*SKISYQRLSIL
Trigger: CAGAATAGAGAGCCTCTGATAGCTTATTTTACTCAAATCTCCAGACACATTTTGGACCTCATAAAGCAGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS CAA 72 bp TCAATATTCAGGAGGCTCTTGTTGTTCTCAAGAACTTaGAACAAATCAGCTAAACACTCCCAACTCTTTTGT +
Preference number: 6 (lower is better)
Translates to: SIFRRLLLFSRT*NKSAKHSQLFC
Trigger: ACAAAAGAGTTGGGAGTGTTTAGCTGATTTGTTCAAAGTTCTTGAGAACAACAAGAGCCTCCTGAATATTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS CAA 90 bp TTCCATGTAATACAGGTTTTAGAAAAGACCATACTAGTGCACCATTaGGAGACTGTAGAATTTCCTGATAAAGCTTCAAACAGAATGGTG +
Preference number: 6 (lower is better)
Translates to: FHVIQVLEKTILVHH*ETVEFPDKASNRMV
Trigger: CACCATTCTGTTTGAAGCTTTATCAGGAAATTCTACAGTCTCCAAATGGTGCACTAGTATGGTCTTTTCTAAAACCTGTATTACATGGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS TCA 72 bp ACAAACGAAAATGATGATCCATGGAACTCTCAAAGCTaGTGTTTCTACAACTTGAGCCAGTATTACAAAGAA +
Preference number: 6 (lower is better)
Translates to: TNENDDPWNSQS*CFYNLSQYYKE
Trigger: TTCTTTGTAATACTGGCTCAAGTTGTAGAAACATCAGCTTTGAGAGTTCCATGGATCATCATTTTCGTTTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042740.13
ENSMUST00000151522.2
CDS TCA 72 bp GCTTGCAAATTTGGCTTGATGATCAGGAAGATCATCTaGAAGAAAGTTATTGATCAACTCCACATTTCTATC +
Preference number: 6 (lower is better)
Translates to: ACKFGLMIRKII*KKVIDQLHISI
Trigger: GATAGAAATGTGGAGTTGATCAATAACTTTCTTTCAGATGATCTTCCTGATCATCAAGCCAAATTTGCAAGC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS TCA 72 bp AACAAATCAGCTAAACACTCCCAACTCTTTTGTACATaGTATTCCAATAAATTAAGGCGCTGTCCCTTAAAC +
Preference number: 6 (lower is better)
Translates to: NKSAKHSQLFCT*YSNKLRRCPLN
Trigger: GTTTAAGGGACAGCGCCTTAATTTATTGGAATATCATGTACAAAAGAGTTGGGAGTGTTTAGCTGATTTGTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13
CDS CAA 72 bp ATACAGGTTTTAGAAAAGACCATACTAGTGCACCATTaGGAGACTGTAGAATTTCCTGATAAAGCTTCAAAC +
Preference number: 6 (lower is better)
Translates to: IQVLEKTILVHH*ETVEFPDKASN
Trigger: GTTTGAAGCTTTATCAGGAAATTCTACAGTCTCCAAATGGTGCACTAGTATGGTCTTTTCTAAAACCTGTAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042740.13